Citrus Sinensis ID: 019794

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MKLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHcccccEEEEEccccccccccccEEEEcccccccHHHccccccHHHHcHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHHHHHcccccEEEcccccEEEcEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHccccEEEEEEcccccEEEEEHHHHHcccccccccccccccEEEHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccEHHHHHHHHHccccEEEEcccccccEEEEEHcccc
Coil and Loop (DISEMBL)
mklhkqssmtqrrdeetlsgqnspylsktpkhprslprsinYLFKEQRLLFILVGILIGSTFFILQpilsrlgppqelhpfhaltanqqrqsfqfhrtssfgaktgrvpvgigrrrLRIVVTggagfvgsHLVDKLIdrgdevividnfftgrkdnlvhhfrnprfelirhdvvepillevdqiyhlacpaspvhykynpvktIKTNVMGTLNMLGLAKRVGAKFLLTstsevygdplehpqketywgnvnpigerscydegkrTAETLTMDYHRGAGVEVRIARIFNtygprmclddgrVVSNFVAQAirrqpmtvygdgkqtrsFQYVSDLVH
Flexible Loop (DISEMBL)
mklhkqssmtqrrdeetlsgqnspylsktpkhprslPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTANQQRQSFQFhrtssfgaktgrvpvgigrrRLRIVVtggagfvgshlvdklIDRGDEVIVIDNfftgrkdnlvHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEvygdplehpqketywgnvnpigERSCYDEGKRTAETltmdyhrgagVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIrrqpmtvygdgkqtrsfqyvsdlvh
Low Complexity Region (SEG)
MKLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKtgrvpvgigrrrlrivvtggAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
Disordered region (IsUnstruct)
**************************************SINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTA******FQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGD***************
Disordered Region (DISOPRED)
************************************PRSINYLFKEQRLLFILVGILIGSTFFIL****************************************************RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
Disordered Region (DISEMBL)
********************QNSPY********RSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
Disordered Region (DISPRO)
*****************************PKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPI***************************************VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q8NBZ7	420	UDP-glucuronic acid decar	yes	no	0.662	0.528	0.693	2e-90
Q5R885	420	UDP-glucuronic acid decar	yes	no	0.662	0.528	0.693	2e-90
Q91XL3	420	UDP-glucuronic acid decar	yes	no	0.662	0.528	0.693	2e-90
Q5PQX0	420	UDP-glucuronic acid decar	yes	no	0.662	0.528	0.693	2e-90
Q6DF08	421	UDP-glucuronic acid decar	yes	no	0.662	0.527	0.689	1e-89
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.704	0.564	0.661	1e-88
Q57664	305	Putative UDP-glucose 4-ep	yes	no	0.611	0.672	0.352	1e-26
Q9ZAE8	320	dTDP-glucose 4,6-dehydrat	yes	no	0.617	0.646	0.327	5e-21
P29782	328	dTDP-glucose 4,6-dehydrat	yes	no	0.623	0.637	0.314	8e-20
O34886	316	Uncharacterized UDP-gluco	yes	no	0.626	0.664	0.308	7e-19

>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1

 Score =  333 bits (853), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/222 (69%), Positives = 183/222 (82%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
           + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDV
Sbjct: 86  KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
           VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           M ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 266 MHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
Homo sapiens (taxid: 9606)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 5

>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1

 Score =  333 bits (853), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/222 (69%), Positives = 183/222 (82%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
           + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDV
Sbjct: 86  KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
           VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           M ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 266 MHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1

 Score =  332 bits (852), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/222 (69%), Positives = 183/222 (82%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
           + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDV
Sbjct: 86  KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
           VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           M ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 266 MHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1

 Score =  332 bits (851), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/222 (69%), Positives = 183/222 (82%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
           + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDV
Sbjct: 86  KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 145

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
           VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 146 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 205

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPR
Sbjct: 206 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 265

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           M ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 266 MHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1

 Score =  330 bits (845), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 153/222 (68%), Positives = 183/222 (82%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
           + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDV
Sbjct: 87  KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV 146

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
           VEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEV
Sbjct: 147 VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEV 206

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPR
Sbjct: 207 YGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 266

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           M ++DGRVVSNF+ QA++ + +TVYG G+QTR+FQYVSDLV+
Sbjct: 267 MHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVN 308

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Xenopus tropicalis (taxid: 8364)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score =  326 bits (836), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/236 (66%), Positives = 185/236 (78%)

Query: 100 SFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH 159
           SF  K   V     + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H
Sbjct: 70  SFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH 129

Query: 160 HFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK 219
              +  FELI HDVVEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAK
Sbjct: 130 WIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAK 189

Query: 220 RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV 279
           RVGA+ LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GV
Sbjct: 190 RVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGV 249

Query: 280 EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           EVR+ARIFNT+G RM ++DGRVVSNF+ QA++ + +TVYG G QTR+FQYVSDLV+
Sbjct: 250 EVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVN 305

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 19/224 (8%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I+VTGGAGF+GSH+VDKLI+   +VI++DN  TG K+N+     NP+ E +  D+ +  L
Sbjct: 2   ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDL 56

Query: 179 LE------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR--VGAKFLLTST 230
            E      V+ + H A   +  +   NPV     NV+GT+N+L + ++  +      +S 
Sbjct: 57  DEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSG 116

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
             VYG+P   P  E +     PI   S Y   K   E     Y+R  G+E  I R  N Y
Sbjct: 117 GAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVY 171

Query: 291 GPRMC-LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
           G R     +  V+S F+ + ++ Q   ++GDG QTR F YV D+
Sbjct: 172 GERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDV 215

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2

 Score =  102 bits (253), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 25/232 (10%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGD--------EVIVIDNF-FTGRKDNLVHHFRNPRFE 167
           ++I+VTGGAGF+GSH V  LI  GD        +V V+D   + G   NL     +PRF 
Sbjct: 1   MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFS 59

Query: 168 LIRHDVVEPILLEVDQIYH--LACPASPVHYKYNPVKT---IKTNVMGTLNMLGLAKR-- 220
            +R D+ +  L+E     H  +A  A+  H   + V +   + +N++GT  +L  A R  
Sbjct: 60  FVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHH 119

Query: 221 VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE 280
           +G +FL  ST EVYG           W   +P+   S Y   K  ++ L + YH+  G++
Sbjct: 120 IG-RFLHVSTDEVYGS-----IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMD 173

Query: 281 VRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           V + R  N YGPR   +  +++  FV + +    + VYGDG+  R + +VSD
Sbjct: 174 VVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSD 223

Probably involved in the biosynthesis of the acarviose moiety of the alpha-glucosidase inhibitor acarbose. Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.

Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) (taxid: 134676)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 6

>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1 SV=1

 Score = 98.2 bits (243), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 17/226 (7%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDE----VIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV 173
           ++VTG AGF+GS  V  L+  G      V  +D   + G  DNL     +PR+   R D+
Sbjct: 5   LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64

Query: 174 VEP----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLT 228
            +     ++   DQ+ HLA  +       +    ++TNV GT  +L  A R G A F+  
Sbjct: 65  CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124

Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           ST EVYG  LEH      W    P+   S Y   K + + L + +H   G++VR+ R  N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179

Query: 289 TYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            YGPR   +  +++  F+   +    + +YGDG   R + +V D V
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHV 223

Involved in the biosynthesis of the streptose moiety of streptomycin. Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.

Streptomyces griseus (taxid: 1911)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 6

>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis (strain 168) GN=ytcB PE=3 SV=1

 Score = 95.1 bits (235), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 20/230 (8%)

Query: 117 LRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNF-----FTGRKDNLVHHFRNPRFELIR 170
           ++I+VTG AGF+GSHL ++L+ D+   VI ID+F     F+ +  NL +     RF  I+
Sbjct: 1   MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60

Query: 171 HDVV----EPILLEVDQIYHLAC-PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK- 224
            +++      +L  VD I+HLA  P     +  +       N+     +L   +    + 
Sbjct: 61  ENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQT 120

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
           F+  STS VYG+      + T    ++P      Y   K T E L   Y +  G+ + I 
Sbjct: 121 FVFASTSSVYGEKQGKVSENTSLSPLSP------YGVTKLTGEKLCHVYKQSFGIPIVIL 174

Query: 285 RIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           R F  YGPR   D        + Q ++++P+T++GDG+Q+R F Y+SD V
Sbjct: 175 RFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCV 222

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 4

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
209420680	436	UDP-glucuronic acid decarboxylase 1 [Gos	0.991	0.761	0.839	1e-160
225439840	437	PREDICTED: UDP-glucuronic acid decarboxy	0.994	0.762	0.833	1e-159
449439990	438	PREDICTED: UDP-glucuronic acid decarboxy	0.973	0.744	0.816	1e-159
356548166	427	PREDICTED: UDP-glucuronic acid decarboxy	0.973	0.763	0.829	1e-158
356537387	427	PREDICTED: UDP-glucuronic acid decarboxy	0.973	0.763	0.826	1e-157
356537389	444	PREDICTED: UDP-glucuronic acid decarboxy	0.973	0.734	0.826	1e-157
297816652	434	UDP-glucuronic acid decarboxylase 1 [Ara	0.991	0.764	0.824	1e-156
356537391	451	PREDICTED: UDP-glucuronic acid decarboxy	0.967	0.718	0.817	1e-154
145361853	435	UDP-glucuronic acid decarboxylase 1 [Ara	0.982	0.756	0.815	1e-153
60932236	435	UDP-glucuronic acid decarboxylase 1 [Pop	0.988	0.760	0.821	1e-153

>gi|209420680|gb|ACI46983.1| UDP-glucuronic acid decarboxylase 1 [Gossypium hirsutum]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/337 (83%), Positives = 296/337 (87%), Gaps = 5/337 (1%)

Query: 2   KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGST 61
           +LHKQSS+  RRDEE L  Q  PY  K+ KHPRSLPRSINYLFKEQRLLFI +GILIGST
Sbjct: 3   QLHKQSSINHRRDEEILIPQTPPYSPKSLKHPRSLPRSINYLFKEQRLLFIFIGILIGST 62

Query: 62  FFILQPILSRLGPPQELHPF--HALTAN--QQRQSFQFHRTSSFGAKTGRVPVGIGRRRL 117
           FFILQP LSRLGP  E HP    + + N     Q F     +    K GRVPVGIGRRR+
Sbjct: 63  FFILQPTLSRLGP-TETHPSVPKSFSNNVVSHTQEFSVSNQNPIHGKMGRVPVGIGRRRM 121

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RIVVTGGAGFVGSHLVDKLI RGDEVIVIDNFFTGRK+N+VH F NPRFELIRHDVVEPI
Sbjct: 122 RIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENVVHLFGNPRFELIRHDVVEPI 181

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA+FLLTSTSEVYGDP
Sbjct: 182 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDP 241

Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
           L+HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG GVEVRIARIFNTYGPRMCLD
Sbjct: 242 LQHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGDGVEVRIARIFNTYGPRMCLD 301

Query: 298 DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           DGRVVSNFVAQAIR+QPMTVYGDGKQTRSFQYVSDLV
Sbjct: 302 DGRVVSNFVAQAIRKQPMTVYGDGKQTRSFQYVSDLV 338

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439840|ref|XP_002277802.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1 [Vitis vinifera]

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/336 (83%), Positives = 295/336 (87%), Gaps = 3/336 (0%)

Query: 2   KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGST 61
           +LHKQSS+  RRDEE  + Q+ PY  KT KHPRSLPRSINYLFKEQRLLFILVGILIGST
Sbjct: 3   QLHKQSSVNHRRDEEIPTSQSPPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGST 62

Query: 62  FFILQPILSRLGPPQELH--PFHALTANQQRQSFQFHRTSSFGA-KTGRVPVGIGRRRLR 118
           FFI+QP LSRLGP +     P         R         S GA K GR+PVGIGRRRLR
Sbjct: 63  FFIVQPSLSRLGPAETRSTIPRSVTIGVTSRDQISIPYPQSNGAGKVGRIPVGIGRRRLR 122

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           IVVTGGAGFVGSHLVDKLI RGD+VIVIDNFFTGRK+N++HHF NPRFELIRHDVVEPIL
Sbjct: 123 IVVTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENVMHHFGNPRFELIRHDVVEPIL 182

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
           LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR+GA+FLLTSTSEVYGDPL
Sbjct: 183 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPL 242

Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
           EHPQKETYWGNVNPIG RSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMC+DD
Sbjct: 243 EHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAEVEVRIARIFNTYGPRMCIDD 302

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           GRVVSNFVAQAIRRQP+TVYGDGKQTRSFQYVSDLV
Sbjct: 303 GRVVSNFVAQAIRRQPLTVYGDGKQTRSFQYVSDLV 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439990|ref|XP_004137768.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus] gi|449517780|ref|XP_004165922.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus]

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 281/344 (81%), Positives = 296/344 (86%), Gaps = 18/344 (5%)

Query: 2   KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGST 61
           +LHKQSS+  RRDEE      SPY  K  KHPRSLPRSINYLF+EQRLLF+ VGILIGST
Sbjct: 6   QLHKQSSINHRRDEEVPPVPTSPYSPKALKHPRSLPRSINYLFREQRLLFVFVGILIGST 65

Query: 62  FFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTS----------SFGAKTGRVPVG 111
           FFILQP LSR+GP +          +  R+SF    TS           FG   GRVPVG
Sbjct: 66  FFILQPSLSRIGPSE--------AGSAIRRSFATGLTSRDQVSGSGIYGFGKTGGRVPVG 117

Query: 112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH 171
           IGRRRLRIVVTGGAGFVGSHLVDKLI+RGD+VIVIDNFFTGRKDNLVHH  NPRFELIRH
Sbjct: 118 IGRRRLRIVVTGGAGFVGSHLVDKLIERGDDVIVIDNFFTGRKDNLVHHLGNPRFELIRH 177

Query: 172 DVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231
           DVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR+GA+FLLTSTS
Sbjct: 178 DVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTS 237

Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYG
Sbjct: 238 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAEVEVRIARIFNTYG 297

Query: 292 PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           PRMCLDDGRVVSNFVAQAIR+QP+TVYGDGKQTRSFQYVSDLV+
Sbjct: 298 PRMCLDDGRVVSNFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVN 341

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548166|ref|XP_003542474.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/335 (82%), Positives = 297/335 (88%), Gaps = 9/335 (2%)

Query: 2   KLHKQSSMTQRRDEETL-SGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ+S+  RR+EE L S + SPY  K+ KH RSLPRSINYL +EQRLLFILVGILIGS
Sbjct: 3   QLHKQTSLNHRREEEMLGSSETSPYSPKSIKHTRSLPRSINYLLREQRLLFILVGILIGS 62

Query: 61  TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIV 120
           TFFI+QP LSRLGPP+ +H F   T           R +  G +TGRVPVGIG RR RIV
Sbjct: 63  TFFIIQPTLSRLGPPEPVHTFLPRTG--------LARFAGPGPRTGRVPVGIGGRRQRIV 114

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
           VTGGAGFVGSHLVDKLI RGD+VIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPILLE
Sbjct: 115 VTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLE 174

Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH 240
           VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR+GA+FLLTSTSEVYGDPLEH
Sbjct: 175 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEH 234

Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 300
           PQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDDGR
Sbjct: 235 PQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 294

Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           VVSNFVAQAIR+QP+TVYGDGKQTRSFQYVSDLV+
Sbjct: 295 VVSNFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVN 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537387|ref|XP_003537209.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1 [Glycine max]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/335 (82%), Positives = 296/335 (88%), Gaps = 9/335 (2%)

Query: 2   KLHKQSSMTQRRDEETL-SGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ+S+  RR+EE L S ++SPY  K+ KH RSLPRSINYL +EQRLLFILVGILIGS
Sbjct: 3   QLHKQTSLNHRREEEMLGSSESSPYSPKSIKHTRSLPRSINYLLREQRLLFILVGILIGS 62

Query: 61  TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIV 120
           TFFI+QP LSR+GPP+  H F   T           R S    +TGRVPVGIG RR RIV
Sbjct: 63  TFFIIQPTLSRMGPPEPAHTFLPRTG--------LARFSGTRPRTGRVPVGIGGRRQRIV 114

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
           VTGGAGFVGSHLVDKLI RGD+VIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPILLE
Sbjct: 115 VTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLE 174

Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH 240
           VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR+GA+FLLTSTSEVYGDPLEH
Sbjct: 175 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEH 234

Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 300
           PQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDDGR
Sbjct: 235 PQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 294

Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           VVSNFVAQAIR+QP+TVYGDGKQTRSFQYVSDLV+
Sbjct: 295 VVSNFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVN 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537389|ref|XP_003537210.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 2 [Glycine max]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/335 (82%), Positives = 296/335 (88%), Gaps = 9/335 (2%)

Query: 2   KLHKQSSMTQRRDEETL-SGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ+S+  RR+EE L S ++SPY  K+ KH RSLPRSINYL +EQRLLFILVGILIGS
Sbjct: 3   QLHKQTSLNHRREEEMLGSSESSPYSPKSIKHTRSLPRSINYLLREQRLLFILVGILIGS 62

Query: 61  TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIV 120
           TFFI+QP LSR+GPP+  H F   T           R S    +TGRVPVGIG RR RIV
Sbjct: 63  TFFIIQPTLSRMGPPEPAHTFLPRTG--------LARFSGTRPRTGRVPVGIGGRRQRIV 114

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
           VTGGAGFVGSHLVDKLI RGD+VIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPILLE
Sbjct: 115 VTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLE 174

Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH 240
           VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR+GA+FLLTSTSEVYGDPLEH
Sbjct: 175 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEH 234

Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 300
           PQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDDGR
Sbjct: 235 PQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 294

Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           VVSNFVAQAIR+QP+TVYGDGKQTRSFQYVSDLV+
Sbjct: 295 VVSNFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVN 329

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297816652|ref|XP_002876209.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp. lyrata] gi|297322047|gb|EFH52468.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp. lyrata]

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/337 (82%), Positives = 294/337 (87%), Gaps = 5/337 (1%)

Query: 2   KLHKQSSMTQRRDEETLS-GQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ  M+ +RDEET+   Q+SPY  KT KHPRSLPRS++YLF+EQRLLFILVGILIGS
Sbjct: 3   QLHKQ--MSSKRDEETIPMSQSSPYSPKTLKHPRSLPRSLHYLFREQRLLFILVGILIGS 60

Query: 61  TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRT--SSFGAKTGRVPVGIGRRRLR 118
           TFFILQP LSRLG  +         +     S    +T  S  G +TGRVPVGIGR+RLR
Sbjct: 61  TFFILQPSLSRLGAAESTSLITRSVSYAVSDSPPSMKTFNSGGGGRTGRVPVGIGRKRLR 120

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           IVVTGGAGFVGSHLVDKLI RGDEVIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPIL
Sbjct: 121 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPIL 180

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
           LEVD IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA+FLLTSTSEVYGDPL
Sbjct: 181 LEVDHIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL 240

Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
           EHPQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDD
Sbjct: 241 EHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDD 300

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           GRVVSNFVAQ IR+ PMTVYGDGKQTRSFQYVSDLV 
Sbjct: 301 GRVVSNFVAQTIRKHPMTVYGDGKQTRSFQYVSDLVE 337

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537391|ref|XP_003537211.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 3 [Glycine max]

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 274/335 (81%), Positives = 293/335 (87%), Gaps = 11/335 (3%)

Query: 2   KLHKQSSMTQRRDEETL-SGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ+S+  RR+EE L S ++SPY  K+ KH RSLPRSINYL +EQRLLFILVGILIGS
Sbjct: 3   QLHKQTSLNHRREEEMLGSSESSPYSPKSIKHTRSLPRSINYLLREQRLLFILVGILIGS 62

Query: 61  TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIV 120
           TFFI+QP LSR+GPP+  H F   T           R S    +TGRVPVGIG RR RIV
Sbjct: 63  TFFIIQPTLSRMGPPEPAHTFLPRTG--------LARFSGTRPRTGRVPVGIGGRRQRIV 114

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
           VTGGAGFVGSHLVDKLI RGD+VIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPILLE
Sbjct: 115 VTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLE 174

Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH 240
           VDQIYHLACPASPVHYKYNPV   KTNVMGTLNMLGLAKR+GA+FLLTSTSEVYGDPLEH
Sbjct: 175 VDQIYHLACPASPVHYKYNPV--YKTNVMGTLNMLGLAKRIGARFLLTSTSEVYGDPLEH 232

Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 300
           PQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDDGR
Sbjct: 233 PQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 292

Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           VVSNFVAQAIR+QP+TVYGDGKQTRSFQYVSDLV+
Sbjct: 293 VVSNFVAQAIRKQPLTVYGDGKQTRSFQYVSDLVN 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145361853|ref|NP_850694.2| UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana] gi|17473549|gb|AAL38251.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana] gi|28058970|gb|AAO29973.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana] gi|332645579|gb|AEE79100.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 278/341 (81%), Positives = 296/341 (86%), Gaps = 12/341 (3%)

Query: 2   KLHKQSSMTQRRDEETLS-GQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS 60
           +LHKQ  M+ +RDEET+   Q+SPY  KT KHPRSLPRS++YLF+EQRLLFILVGILIGS
Sbjct: 3   QLHKQ--MSSKRDEETIPMSQSSPYSPKTLKHPRSLPRSLHYLFREQRLLFILVGILIGS 60

Query: 61  TFFILQPILSRLGPPQELH------PFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGR 114
           TFFILQP LSRLG  +          +    +   R +F    +   G +TGRVPVGIGR
Sbjct: 61  TFFILQPSLSRLGAAESTSLITRSVSYAVTDSPPSRSTFN---SGGGGGRTGRVPVGIGR 117

Query: 115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV 174
           +RLRIVVTGGAGFVGSHLVDKLI RGDEVIVIDNFFTGRK+NLVH F NPRFELIRHDVV
Sbjct: 118 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVV 177

Query: 175 EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY 234
           EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA+FLLTSTSEVY
Sbjct: 178 EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVY 237

Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
           GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRM
Sbjct: 238 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRM 297

Query: 295 CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           CLDDGRVVSNFVAQ IR+ PMTVYGDGKQTRSFQYVSDLV 
Sbjct: 298 CLDDGRVVSNFVAQTIRKHPMTVYGDGKQTRSFQYVSDLVE 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60932236|gb|AAX37334.1| UDP-glucuronic acid decarboxylase 1 [Populus tomentosa]

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/336 (82%), Positives = 289/336 (86%), Gaps = 5/336 (1%)

Query: 2   KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGST 61
           +LHKQ+S+  RRDEE  + Q+  Y  K  KHPRSLPRSINYLFKEQRLLFILVGILIGST
Sbjct: 4   QLHKQTSVNHRRDEEIPTSQS--YSPKMLKHPRSLPRSINYLFKEQRLLFILVGILIGST 61

Query: 62  FFILQPILSRLGPPQ-ELHPFHALTANQQRQSFQFHRTSSFGAKT--GRVPVGIGRRRLR 118
           FFI QP LSRL P     H   + +   + Q      +  F  +T  GRVP GIGR+ LR
Sbjct: 62  FFIFQPTLSRLNPSDPTTHSSLSSSIYHRNQDSSSGSSGFFSKRTFPGRVPAGIGRKSLR 121

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           IVVTGGAGFVGSHLVDKLI RGDEVIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPIL
Sbjct: 122 IVVTGGAGFVGSHLVDKLISRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPIL 181

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
           LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA+FLLTSTSEVYGDPL
Sbjct: 182 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL 241

Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
           EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMCLDD
Sbjct: 242 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGADVEVRIARIFNTYGPRMCLDD 301

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           GRVVSNFVAQ IR QPMTVYGDGKQTRSFQYVSDLV
Sbjct: 302 GRVVSNFVAQVIRNQPMTVYGDGKQTRSFQYVSDLV 337

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.976	0.734	0.638	1.5e-108
TAIR|locus:2078206	341	UXS5 "UDP-XYL synthase 5" [Ara	0.626	0.615	0.767	8.9e-86
TAIR|locus:2053275	343	UXS6 "UDP-XYL synthase 6" [Ara	0.626	0.612	0.763	3e-85
TAIR|locus:2168539	357	UXS3 "UDP-glucuronic acid deca	0.626	0.588	0.753	8e-85
TIGR_CMR|GSU_1815	311	GSU_1815 "NAD-dependent epimer	0.626	0.675	0.719	3.2e-81
FB|FBgn0035848	441	CG7979 [Drosophila melanogaste	0.626	0.476	0.704	9.7e-80
UNIPROTKB|F1PU61	414	UXS1 "Uncharacterized protein"	0.629	0.509	0.701	1.6e-79
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.629	0.581	0.701	1.6e-79
UNIPROTKB|Q8NBZ7	420	UXS1 "UDP-glucuronic acid deca	0.629	0.502	0.701	1.6e-79
MGI|MGI:1915133	420	Uxs1 "UDP-glucuronate decarbox	0.629	0.502	0.701	1.6e-79

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
 Identities = 214/335 (63%), Positives = 250/335 (74%)

Query:     7 SSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQ 66
             S +  RR  ET       Y  K  K   ++ R + Y+ +EQRL+F+LVGI I +  F + 
Sbjct:     3 SELINRR-HETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTIF 61

Query:    67 PILSRLGPPQE------LHPFHA-LTANQQRQSFQFHRTSSFGAKXXXXXXXXXXXXXXX 119
             P  ++  P  +      + P  + + A Q ++       +  GA                
Sbjct:    62 PRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGATGGKIPLGLKRKGLRV 121

Query:   120 XXXXXAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL 179
                  AGFVGSHLVD+L+ RGD VIV+DNFFTGRK+N++HHF NP FE+IRHDVVEPILL
Sbjct:   122 VVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEPILL 181

Query:   180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE 239
             EVDQIYHLACPASPVHYK+NPVKTIKTNV+GTLNMLGLAKRVGA+FLLTSTSEVYGDPL+
Sbjct:   182 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 241

Query:   240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
             HPQ ETYWGNVNPIG RSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMC+DDG
Sbjct:   242 HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDG 301

Query:   300 RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             RVVSNFVAQA+R++P+TVYGDGKQTRSFQ+VSDLV
Sbjct:   302 RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2078206 UXS5 "UDP-XYL synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 162/211 (76%), Positives = 182/211 (86%)

Query:   125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
             AGF+GSHLVDKL++   +EVIV DN+FTG KDNL     +PRFELIRHDV EP+L+EVDQ
Sbjct:    37 AGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQ 96

Query:   184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
             IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ 
Sbjct:    97 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQP 156

Query:   244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
             E+YWGNVNPIG RSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct:   157 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 216

Query:   304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             NF+AQA+R + +TV   G QTRSF YVSD+V
Sbjct:   217 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA;TAS

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2053275 UXS6 "UDP-XYL synthase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 161/211 (76%), Positives = 181/211 (85%)

Query:   125 AGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
             AGF+GSHLVDKL+ +  +EVIV DN+FTG KDNL     +PRFELIRHDV EP+ +EVDQ
Sbjct:    39 AGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQ 98

Query:   184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
             IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ 
Sbjct:    99 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQT 158

Query:   244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
             E+YWGNVNPIG RSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct:   159 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 218

Query:   304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             NF+AQA+R + +TV   G QTRSF YVSD+V
Sbjct:   219 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 249

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2168539 UXS3 "UDP-glucuronic acid decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 159/211 (75%), Positives = 182/211 (86%)

Query:   125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
             AGF+GSHLVDKL++   +EV+V DN+FTG K+NL     +PRFELIRHDV EP+L+EVD+
Sbjct:    53 AGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTEPLLIEVDR 112

Query:   184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
             IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ 
Sbjct:   113 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQP 172

Query:   244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
             E+YWGNVNPIG RSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct:   173 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 232

Query:   304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             NF+AQA+R + +TV   G QTRSF YVSD+V
Sbjct:   233 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0042732 "D-xylose metabolic process" evidence=RCA;IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 151/210 (71%), Positives = 177/210 (84%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGF+GSHL ++L+++G +V+ +DNFFTG K N+       RFE+IRHD++EPILLEVD+I
Sbjct:     9 AGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEPILLEVDRI 68

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             Y+LACPASPVHY+YNPVKTIKT+VMGT+NMLGLAKRV A+ L  STSEVYGDP  HPQ E
Sbjct:    69 YNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGDPTIHPQPE 128

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
             +YWGNVNPIG RSCYDEGKR AETL MDYHR  GV++RIARIFNTYGPRM   DGRVVSN
Sbjct:   129 SYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAEHDGRVVSN 188

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             FV QA+R + +TVYGDG QTRSF YV DL+
Sbjct:   189 FVVQALRGEDLTVYGDGSQTRSFCYVDDLL 218

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

FB|FBgn0035848 CG7979 [Drosophila melanogaster (taxid:7227)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 148/210 (70%), Positives = 175/210 (83%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGFVGSHLVD L+ +G EVIV+DNFFTGRK N+ H   +  FELI HD+V P+ +E+D+I
Sbjct:   124 AGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIVNPLFIEIDEI 183

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             YHLA PASP HY YNPVKTIKTN MGT+N+LGLAKRV AK L+ STSEVYGDP  HPQ E
Sbjct:   184 YHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPE 243

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
             TYWG+VNPIG R+CYDEGKR +ETL+  Y +   V+VR+ARIFNTYGPRM ++DGRVVSN
Sbjct:   244 TYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRVVSN 303

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             F+ QA+R + +TVYG+GKQTRSFQYVSDLV
Sbjct:   304 FILQALRNETITVYGNGKQTRSFQYVSDLV 333

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

UNIPROTKB|F1PU61 UXS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 148/211 (70%), Positives = 174/211 (82%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+ +EVDQI
Sbjct:    91 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 150

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP  HPQ E
Sbjct:   151 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 210

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
              YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct:   211 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 270

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
             F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct:   271 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 301

GO:0005739 "mitochondrion" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 148/211 (70%), Positives = 174/211 (82%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+ +EVDQI
Sbjct:    40 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 99

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP  HPQ E
Sbjct:   100 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 159

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
              YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct:   160 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 219

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
             F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct:   220 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 250

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 148/211 (70%), Positives = 174/211 (82%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+ +EVDQI
Sbjct:    97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP  HPQ E
Sbjct:   157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
              YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct:   217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
             F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct:   277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

MGI|MGI:1915133 Uxs1 "UDP-glucuronate decarboxylase 1" [Mus musculus (taxid:10090)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 148/211 (70%), Positives = 174/211 (82%)

Query:   125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
             AGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+ +EVDQI
Sbjct:    97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156

Query:   185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
             YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP  HPQ E
Sbjct:   157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216

Query:   245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
              YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct:   217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276

Query:   305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
             F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct:   277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISO

GO:0050662 "coenzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.5__1722__AT3G53520.1 annotation not avaliable (434 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	0.0
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	0.0
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-158
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	7e-62
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-56
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-54
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-47
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	7e-46
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-44
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	3e-37
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	6e-35
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-33
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	2e-30
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	3e-30
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	5e-30
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-29
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	9e-29
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	5e-26
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	2e-24
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-22
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	5e-22
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	4e-21
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	2e-20
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	5e-20
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	1e-18
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	3e-18
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-17
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	9e-16
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	1e-15
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	2e-15
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-15
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	4e-15
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-14
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-14
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	5e-14
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	7e-14
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	3e-13
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	3e-13
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	6e-13
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-12
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-12
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	8e-12
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	1e-11
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	3e-11
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	3e-11
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	6e-11
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-10
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	4e-10
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	6e-10
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	3e-09
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	4e-09
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	7e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	2e-08
PRK08125	660	PRK08125, PRK08125, bifunctional UDP-glucuronic ac	2e-08
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	3e-08
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	5e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	9e-08
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-07
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-07
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	1e-07
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-07
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	2e-07
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-07
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	3e-07
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	2e-06
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	3e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	7e-06
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	9e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	2e-05
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	2e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	3e-05
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	9e-05
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	3e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	4e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	5e-04
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	5e-04
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	5e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.001
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	0.001
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	0.002
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	0.002
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	0.003

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score =  600 bits (1548), Expect = 0.0
 Identities = 284/336 (84%), Positives = 296/336 (88%), Gaps = 3/336 (0%)

Query: 2   KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGST 61
           +LHKQ S+  RRDEE  + Q+SPY  KT KHPRSLPRSINYLFKEQRLLFILVGILIGST
Sbjct: 3   QLHKQMSVNHRRDEEIPTSQSSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGST 62

Query: 62  FFILQPILSRLGP--PQELHPFH-ALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLR 118
           FFILQP LSRLGP     L     ++       S     +S  G +TGRVPVGIGR+RLR
Sbjct: 63  FFILQPSLSRLGPAESTSLITRSVSIAVTDSPPSSSTFNSSGGGGRTGRVPVGIGRKRLR 122

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           IVVTGGAGFVGSHLVDKLI RGDEVIVIDNFFTGRK+NLVH F NPRFELIRHDVVEPIL
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPIL 182

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
           LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA+FLLTSTSEVYGDPL
Sbjct: 183 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL 242

Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
           EHPQKETYWGNVNPIGERSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCLDD
Sbjct: 243 EHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDD 302

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           GRVVSNFVAQ IR+QPMTVYGDGKQTRSFQYVSDLV
Sbjct: 303 GRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLV 338

Length = 436

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score =  507 bits (1307), Expect = 0.0
 Identities = 228/336 (67%), Positives = 266/336 (79%), Gaps = 9/336 (2%)

Query: 7   SSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFIL- 65
           S +  RR EET    ++ Y  K  K    + R I Y+ +EQRL+F+LVGI I +  F + 
Sbjct: 3   SELINRRHEETQPTADA-YYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTIF 61

Query: 66  ----QPILSRLGPPQE--LHPFHALT-ANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLR 118
               QP    + P     + P  +   A Q ++       +  G   G++P+G+ R+ LR
Sbjct: 62  PSSSQPSPYSVDPLSGYGIRPDESYVPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKGLR 121

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           +VVTGGAGFVGSHLVD+L+ RGD VIV+DNFFTGRK+N++HHF NP FELIRHDVVEPIL
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPIL 181

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
           LEVDQIYHLACPASPVHYK+NPVKTIKTNV+GTLNMLGLAKRVGA+FLLTSTSEVYGDPL
Sbjct: 182 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL 241

Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
           +HPQ ETYWGNVNPIG RSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMC+DD
Sbjct: 242 QHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDD 301

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           GRVVSNFVAQA+R++P+TVYGDGKQTRSFQ+VSDLV
Sbjct: 302 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 337

Length = 442

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score =  444 bits (1145), Expect = e-158
 Identities = 166/217 (76%), Positives = 188/217 (86%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RI++TGGAGF+GSHL D+L++ G EVI +DNFFTGRK N+ H   +P FE IRHDV EP+
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEPL 61

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
            LEVDQIYHLACPASPVHY+YNP+KT+KTNV+GTLNMLGLAKRVGA+ LL STSEVYGDP
Sbjct: 62  YLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLASTSEVYGDP 121

Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
             HPQ E+YWGNVNPIG RSCYDEGKR AETL M YHR  GV+VRIARIFNTYGPRM  +
Sbjct: 122 EVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMHPN 181

Query: 298 DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           DGRVVSNF+ QA+R +P+TVYGDG QTRSFQYVSDLV
Sbjct: 182 DGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLV 218

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  198 bits (507), Expect = 7e-62
 Identities = 93/225 (41%), Positives = 131/225 (58%), Gaps = 15/225 (6%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           R++VTGGAGF+GSHLV++L++RG EVIV+DN  TG+K+NL      P  + I  D+    
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEV--KPNVKFIEGDIRDDE 58

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS 231
            VE     VD ++H A  AS      +P+K  + NV+GTLN+L  A++ G K F+  S+S
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSS 118

Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
            VYGDP   P+ E +    NP+   S Y   K   E     + R  G+     R FN YG
Sbjct: 119 SVYGDPPYLPKDEDH--PPNPL---SPYAVSKYAGELYCQVFARLYGLPTVSLRYFNVYG 173

Query: 292 PRMCLDDGR--VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           PR   + G   V+  F+ +A++ +P T+YGDG+QTR F YV D+V
Sbjct: 174 PRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVV 218

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  185 bits (470), Expect = 2e-56
 Identities = 83/224 (37%), Positives = 113/224 (50%), Gaps = 11/224 (4%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RI+VTGGAGF+GSHLV++L+  G +V  +D    G    L         +L   D+V+ +
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDEL 60

Query: 178 LLEV-DQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTST-SEV 233
              V D + HLA  +S       +P + +  NV GTLN+L  A+  G  +F+  S+ S V
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP   P  E       P    + Y   K  AE L   Y R  G+ V I R FN YGP 
Sbjct: 121 YGDPPPLPIDEDL----GPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Query: 294 MCLD-DGRVVSNFVAQAIRRQPM-TVYGDGKQTRSFQYVSDLVH 335
              D    VVS F+ Q ++ +P+  + GDG QTR F YV D+  
Sbjct: 177 DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVAD 220

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  175 bits (447), Expect = 3e-54
 Identities = 77/217 (35%), Positives = 109/217 (50%), Gaps = 38/217 (17%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I+VTGGAGF+GSHLV +L++RG EV+VID                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL----------------------------- 31

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVYGDP 237
              D + HLA          NP +  +TNV+GTLN+L  A++ G  +F+  S++ VYG P
Sbjct: 32  ---DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSP 88

Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
              P++E       P+   S Y   K  AE L   Y    G+ V I R+ N YGP     
Sbjct: 89  EGLPEEEETP--PRPL---SPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPR 143

Query: 298 DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
              VV++F+ +A+  +P+TV+G G QTR F +V D+V
Sbjct: 144 LDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVV 180

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  159 bits (405), Expect = 1e-47
 Identities = 77/228 (33%), Positives = 106/228 (46%), Gaps = 26/228 (11%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I+VTGG GF+GSHLV +L+  G EVI        R+          R      D+ +P  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRRRSES---LNTGRIRFHEGDLTDPDA 54

Query: 179 LE-------VDQIYHLACPASPVHYKYN---PVKTIKTNVMGTLNMLGLAKRVGA-KFLL 227
           LE        D + HL   A+      +   P   I+ NV+GTL +L  A+R G  +F+ 
Sbjct: 55  LERLLAEVQPDAVIHL---AAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVF 111

Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            S+SEVYGD  + P  E       P+G  S Y   K  AE L   Y R  G+   I R+F
Sbjct: 112 ASSSEVYGDVADPPITEDT-----PLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLF 166

Query: 288 NTYGPR-MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           N YGP         V+   + + +  +P+ + GDG Q R F YV D+ 
Sbjct: 167 NVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVA 214

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  157 bits (400), Expect = 7e-46
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 20/226 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP- 176
           RI+VTGGAGF+GSHLVD+L++ G+EV+V+DN  +GR++N+   F N  F  ++ D+++  
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTA 60

Query: 177 ---ILLEVDQIYHLACPASP-VHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTST 230
                 + D ++HLA  A+P V     +P   ++ NV+ T N+L   +  G K  +  S+
Sbjct: 61  DKVAKKDGDTVFHLA--ANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASS 118

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           S VYG+    P  E Y     PI   S Y   K  AE L   Y    G +  I R  N  
Sbjct: 119 STVYGEAKVIPTPEDY--PPLPI---SVYGASKLAAEALISAYAHLFGFQAWIFRFANIV 173

Query: 291 GPRMCLDDGRVVSNFVAQAIRRQP--MTVYGDGKQTRSFQYVSDLV 334
           GPR       V+ +F+ + ++R P  + V GDG+Q +S+ YVSD V
Sbjct: 174 GPRS---THGVIYDFINK-LKRNPNELEVLGDGRQRKSYLYVSDCV 215

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  153 bits (388), Expect = 5e-44
 Identities = 77/223 (34%), Positives = 113/223 (50%), Gaps = 9/223 (4%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
            ++VTG  GF+GSHL ++L+  G EV  +D + +     L+ +  + RF  I  DV    
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS 231
            VE ++ + D ++HLA   +  +    P+  ++TNV GTLN+L  A  +  K  + TSTS
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTSTS 120

Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           EVYG   + P  E +   +     RS Y   K+ A+ L   Y R  G+ V I R FNTYG
Sbjct: 121 EVYGTAQDVPIDEDH-PLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNTYG 179

Query: 292 PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           PR       V+   ++Q    Q +   GDG  TR F +V D  
Sbjct: 180 PRQ--SARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTA 220

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  135 bits (342), Expect = 3e-37
 Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 17/228 (7%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVV 174
           +I+VTGGAGF+GS+ V  L+++    ++I +D   + G  +NL     +PR+  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDIC 61

Query: 175 EPILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFL 226
           +  L+       ++D + H A  +       +P   I+TNV+GT  +L  A++ G  +F+
Sbjct: 62  DAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGVKRFV 121

Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
             ST EVYGD L    + T    + P    S Y   K  A+ L   YHR  G+ V I R 
Sbjct: 122 HISTDEVYGD-LLDDGEFTETSPLAP---TSPYSASKAAADLLVRAYHRTYGLPVVITRC 177

Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            N YGP       +++  F+  A+  +P+ +YGDG   R + YV D  
Sbjct: 178 SNNYGPYQ--FPEKLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHA 223

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score =  129 bits (326), Expect = 6e-35
 Identities = 70/236 (29%), Positives = 95/236 (40%), Gaps = 27/236 (11%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
            R +VTG  GF+GSHL ++L   G  V   D                   +L   +    
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEFHLVDLREMENCLK 60

Query: 177 ILLEVDQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
               VD ++HLA     + Y + N    +  N +   NML  A+  G + FL  S++ VY
Sbjct: 61  ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSACVY 120

Query: 235 GDPLEHPQKETYWGNVNPIGE--------RSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
             P    Q ET    V  + E        +  Y   K   E L   Y+   G+E RI R 
Sbjct: 121 --PEFK-QLET---TVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVRF 174

Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQ--------PMTVYGDGKQTRSFQYVSDLV 334
            N YGPR   D GR        A+ R+           ++GDG QTRSF Y+ D V
Sbjct: 175 HNIYGPRGTWDGGR---EKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCV 227

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score =  125 bits (316), Expect = 1e-33
 Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 26/234 (11%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVID----NFFTGRKDNLVHHFRNPRFELIRHDV 173
           R ++TG  G  GS+L + L+++G EV  I     +F T R D+L  +    R  L   D+
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYIN--KDRITLHYGDL 58

Query: 174 VEPI-LLEV------DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK--RVGAK 224
            +   L         D+IYHLA  +       +P  T + N +GTLN+L   +   + A+
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
           F   S+SE YG   E PQ ET      P   RS Y   K  A+ +T +Y    G+     
Sbjct: 119 FYQASSSEEYGKVQELPQSET-----TPFRPRSPYAVSKLYADWITRNYREAYGLFAVNG 173

Query: 285 RIFNTYGPRMCLDDGRVVSNFVAQAIRR----QPMTVYGDGKQTRSFQYVSDLV 334
           R+FN  GPR    +  V      Q  R     QP+   G+    R +    D V
Sbjct: 174 RLFNHEGPRR--GETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYV 225

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score =  116 bits (293), Expect = 2e-30
 Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 22/228 (9%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEV--IVIDNFFT--GRKDNLVHHFRNPRFELIRHDVV 174
           ++VTG  GF+GSHLV+ L+ +G EV   V+ N F   G  D      ++ + E++  D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKD-KIEVVTGDIR 59

Query: 175 EPILLE-----VDQIYHLAC-PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLL 227
           +P  +       D ++HLA   A P  Y   P   + TNV GTLN+L  A+ +G  K + 
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIAIPYSYI-APDSYVDTNVTGTLNVLQAARDLGVEKVVH 118

Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           TSTSEVYG     P  E +     P+  +S Y   K  A+ L + ++R     V I R F
Sbjct: 119 TSTSEVYGTAQYVPIDEKH-----PLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPF 173

Query: 288 NTYGPRMCLDDGR-VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           NTYGPR      R V+   + Q    +     G    TR F YV+D V
Sbjct: 174 NTYGPRQSA---RAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTV 218

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score =  117 bits (294), Expect = 3e-30
 Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 33/248 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVHHFRNPRFELIRHDV 173
           R+++TGGAGF+GS+L    + +G EVI  DN       G    L  +  +     +  D+
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGDI 61

Query: 174 -----VEPILLEVDQIYHLACPASPVHYKY--NPVKTIKTNVMGTLNMLGLAKRVG--AK 224
                +E +  ++D I H A  A P       +P    +TN +GTLN+L  A++    A 
Sbjct: 62  RNRNDLEDLFEDIDLIIHTA--AQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAP 119

Query: 225 FLLTSTSEVYGD-PLEHPQKE--TYW----GNVNP--IGE-------RSCYDEGKRTAET 268
           F+ TST++VYGD P   P +E  T +       +P  I E        S Y   K  A+ 
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAADQ 179

Query: 269 LTMDYHRGAGVEVRIARIFNTYGPR-MCLDDGRVVSNFVAQAIRRQPMTVYG-DGKQTRS 326
              +Y R  G++  + R     GPR    +D   V+ F+  A+  +P+T++G  GKQ R 
Sbjct: 180 YVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQVRD 239

Query: 327 FQYVSDLV 334
             + +DLV
Sbjct: 240 VLHSADLV 247

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  116 bits (292), Expect = 5e-30
 Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 33/237 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN------PRFELIRH 171
           +I+VTG AGF+G H+  +L++RGDEV+ IDN      D  +   R         F+ ++ 
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDN-LNDYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 172 DVVEPILL-------EVDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVG- 222
           D+ +   L       E D + HLA  A  V Y   NP   + +N++G LN+L L +  G 
Sbjct: 61  DLEDREALRRLFKDHEFDAVIHLAAQAG-VRYSLENPHAYVDSNIVGFLNLLELCRHFGV 119

Query: 223 AKFLLTSTSEVYGDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMDYHRGAGVEV 281
              +  S+S VYG   + P  E     V+ PI   S Y   K+  E +   Y    G+  
Sbjct: 120 KHLVYASSSSVYGLNTKMPFSED--DRVDHPI---SLYAATKKANELMAHTYSHLYGIPT 174

Query: 282 RIARIFNTYG----PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
              R F  YG    P M L        F    +  +P+ V+ DG  +R F Y+ D+V
Sbjct: 175 TGLRFFTVYGPWGRPDMAL------FLFTKAILEGKPIDVFNDGNMSRDFTYIDDIV 225

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score =  113 bits (285), Expect = 3e-29
 Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 21/227 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELI------RH 171
           R+++ GG GF+GSHLVD L++ G +V V D     R     +       + I      R 
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFD-----RSIPP-YELPLGGVDYIKGDYENRA 54

Query: 172 DVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTS 229
           D+    L+ +D + HLA   +P     NP+  I+TNV  T+ +L      G       +S
Sbjct: 55  DLES-ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASS 113

Query: 230 TSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
              VYG P + P  E+      PI   S Y   K   E     Y    G++  + RI N 
Sbjct: 114 GGTVYGVPEQLPISESD--PTLPI---SSYGISKLAIEKYLRLYQYLYGLDYTVLRISNP 168

Query: 290 YGPRMCLDDGR-VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           YGP    D  + V+   + + +R +P+ ++GDG+  R + Y+ DLV 
Sbjct: 169 YGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVE 215

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score =  113 bits (284), Expect = 9e-29
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 21/229 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVV 174
           +I+VTGGAGF+GS+ V  ++++   D V+ +D   + G  +NL     +PR+  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDIC 61

Query: 175 EPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR--VGAKF 225
           +  L++        D + H A  +        P   I+TNV+GT  +L  A++     +F
Sbjct: 62  DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRF 121

Query: 226 LLTSTSEVYGD-PLEHPQ-KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRI 283
              ST EVYGD  L+     ET     NP    S Y   K  ++ L   Y R  G+   I
Sbjct: 122 HHISTDEVYGDLGLDDDAFTET--TPYNP---SSPYSASKAASDLLVRAYVRTYGLPATI 176

Query: 284 ARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
            R  N YGP       +++   +  A+  +P+ VYGDG Q R + YV D
Sbjct: 177 TRCSNNYGPYQ--FPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED 223

Length = 340

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score =  105 bits (263), Expect = 5e-26
 Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 18/227 (7%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV- 173
           RI+VTGGAGF+GS+ V  +++     EVIV+D   + G  +NL     NPR+  ++ D+ 
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60

Query: 174 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR--VGAKF 225
               V  +  E   D + H A  +        P   I+TNV+GT  +L   ++     +F
Sbjct: 61  DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120

Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
              ST EVYGD LE   K   +    P+   S Y   K  ++ L   YHR  G+   I R
Sbjct: 121 HHISTDEVYGD-LE---KGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITR 176

Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
             N YGP    +  +++   +  A+  +P+ VYGDG+Q R + YV D
Sbjct: 177 CSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVED 221

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  100 bits (252), Expect = 2e-24
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 28/239 (11%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I+VTGGAG++GSH V +L++ G EV+++DN   G ++ L    R      +  D+ +  
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60

Query: 178 LL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTS 229
           LL       ++D + H A   +       P+K  + NV+GTLN+L   ++ G K F+ +S
Sbjct: 61  LLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120

Query: 230 TSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHR-GAGVEVRIARIFN 288
           ++ VYG+P   P  E       P+G  + Y   K  +E +  D  +        I R FN
Sbjct: 121 SAAVYGEPSSIPISEDS-----PLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRYFN 175

Query: 289 TYGPRMCLDDGRVVSN------FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDL 333
             G     D G           +  Q    +R  +T++G      DG   R + +V DL
Sbjct: 176 VAGAHPSGDIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDL 234

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 95.7 bits (239), Expect = 2e-22
 Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 46/249 (18%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +++VTGGAG++GSH V +L++ G +V+V+DN   G ++  +      R E    D+ +  
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHRE-ALPRIEKIRIEFYEGDIRDRA 59

Query: 178 LLE-------VDQIYHLACPASPVHYKY------NPVKTIKTNVMGTLNMLGLAKRVGAK 224
            L+       +D + H A        K        P+K    NV+GTLN+L   +  G K
Sbjct: 60  ALDKVFAEHKIDAVIHFAA------LKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVK 113

Query: 225 -FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRI 283
            F+ +S++ VYG+P   P  E       P+   + Y   K   E +  D  +  G+   I
Sbjct: 114 NFVFSSSAAVYGEPETVPITEEA-----PLNPTNPYGRTKLMVEQILRDLAKAPGLNYVI 168

Query: 284 ARIFNTYGPRMCLDDGRVVSN---------FVAQAI--RRQPMTVYG------DGKQTRS 326
            R FN  G       G +  +         +V Q    RR+ + ++G      DG   R 
Sbjct: 169 LRYFNPAGAHP---SGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRD 225

Query: 327 FQYVSDLVH 335
           + +V DL  
Sbjct: 226 YIHVVDLAD 234

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 94.2 bits (235), Expect = 5e-22
 Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 41/244 (16%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +++VTGGAG++GSH V +L+  G EV+V+DN   G K  L       +F+    D+++  
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIAL----LKLQFKFYEGDLLDRA 57

Query: 178 LLEVDQIYHLACPASPVH---YKY------NPVKTIKTNVMGTLNMLGLAKRVGAK-FLL 227
           LL    ++      + VH            NP+K    NV+GTLN++    + G K F+ 
Sbjct: 58  LL--TAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIF 115

Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           +ST+ VYG+P   P  ET      P+   + Y   K  +E +  D  +    +V I R F
Sbjct: 116 SSTAAVYGEPTTSPISETS-----PLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYF 170

Query: 288 NTYGPRMCLDDGRV------VSN---FVAQAI--RRQPMTVYGDGKQT------RSFQYV 330
           N  G      DG +       +      A+A   +R  + ++GD   T      R + +V
Sbjct: 171 NVAGACP---DGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHV 227

Query: 331 SDLV 334
            DL 
Sbjct: 228 DDLA 231

Length = 329

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 91.6 bits (228), Expect = 4e-21
 Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 44/242 (18%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRK-DNLV----HHF--RNPRFELIR 170
           I+VTGGAGF+GS+LV  L +RG  +++V+DN   G K  NLV      +  ++   + +R
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61

Query: 171 HDVVEPILLEVDQIYHL-ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS 229
                    +++ I+H  AC  +      +    +  N   T  +L        +F+  S
Sbjct: 62  KGDENF---KIEAIFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKIRFIYAS 115

Query: 230 TSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD---YHRGAGVEVRIA-- 284
           ++ VYG+      ++    N+ P+   + Y   K     L  D      G  V  ++   
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPL---NVYGYSK-----LLFDQWARRHGKEVLSQVVGL 167

Query: 285 RIFNTYGP------RMCLDDGRVVSNFVAQAIRRQPMTV------YGDGKQTRSFQYVSD 332
           R FN YGP      RM      VV +   Q    + + +      Y DG+Q R F YV D
Sbjct: 168 RYFNVYGPREYHKGRM----ASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKD 223

Query: 333 LV 334
           +V
Sbjct: 224 VV 225

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 90.6 bits (225), Expect = 2e-20
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF-------EL 168
           +LRI +TG  GF+ SH+  +L   G  +I  D      K N   H     F       +L
Sbjct: 21  KLRICITGAGGFIASHIARRLKAEGHYIIASD-----WKKN--EHMSEDMFCHEFHLVDL 73

Query: 169 IRHDVVEPILLEVDQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FL 226
              +    +   VD +++LA     + + + N    +  N M + NML  A+  G K F 
Sbjct: 74  RVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFF 133

Query: 227 LTSTSEVYGDPLEHPQKETYWG----NVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVR 282
             S++ +Y    E  Q ET       +  P   +  Y   K   E L   Y +  G+E R
Sbjct: 134 YASSACIYP---EFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 190

Query: 283 IARIFNTYGPRMCLDDGR--VVSNFVAQAI-RRQPMTVYGDGKQTRSFQYVSDLV 334
           I R  N YGP      GR    + F  +A+       ++GDGKQTRSF ++ + V
Sbjct: 191 IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECV 245

Length = 370

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 88.3 bits (219), Expect = 5e-20
 Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 35/192 (18%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           +++++TGGAG +GSHL++ L++RG +V+VIDNF TGR+++L  H   P   ++   + + 
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDH---PNLTVVEGSIADK 57

Query: 177 ILLEVDQIYHLACPASPVH----YKYNP---VKTIKTNVMGTLNMLGLAKRVGAK-FLLT 228
            L  VD+++    P + VH    YK +P    +   TNV+G  N++  AK+ G K  +  
Sbjct: 58  AL--VDKLFGDFKPDAVVHTAAAYK-DPDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYF 114

Query: 229 STSEVYGDP-------LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEV 281
            T+  YG         L+HP          P G  S Y   K   E     Y   +GV+ 
Sbjct: 115 QTALCYGLKPMQQPIRLDHP--------RAPPG--SSYAISKTAGE----YYLELSGVDF 160

Query: 282 RIARIFNTYGPR 293
              R+ N  GPR
Sbjct: 161 VTFRLANVTGPR 172

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 85.5 bits (211), Expect = 1e-18
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 24/234 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVE 175
           +I++TGGAGF+GS LV  +I+   D V+V+D   + G   +L    ++ RF   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62

Query: 176 PILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA---------- 218
              L         D + HLA  +        P   I+TN++GT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122

Query: 219 KRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
           K+   +F   ST EVYGD       + ++    P    S Y   K +++ L   + R  G
Sbjct: 123 KKSAFRFHHISTDEVYGD---LHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179

Query: 279 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           +   I    N YGP    +  +++   +  A+  +P+ VYG+G+Q R + YV D
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVED 231

Length = 355

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 85.2 bits (211), Expect = 3e-18
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 32/234 (13%)

Query: 119 IVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVE 175
           I++TG AGF+ SH+ ++LI      +++V+D   +     NL     +P F+ ++ D+  
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68

Query: 176 PILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFL 226
             L+        +D I H A      +   N  +  K N+ GT  +L   K  G   +F+
Sbjct: 69  ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128

Query: 227 LTSTSEVYGDPLEHPQKETYWGNV--------NPIGERSCYDEGKRTAETLTMDYHRGAG 278
             ST EVYG+  E    +   GN         NP      Y   K  AE L M Y R  G
Sbjct: 129 HVSTDEVYGETDE----DADVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYG 178

Query: 279 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           + V   R  N YGP    +  +++  F+  A++ +P+ ++GDG   RS+ Y  D
Sbjct: 179 LPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCED 230

Length = 668

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVID---NFFTGRKDNLVH--HFRNPRFELIRHD 172
             ++TG  G  GS+L + L+++G EV  I    + F   + +L    H  +PR  L   D
Sbjct: 4   VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGD 63

Query: 173 VVEP-----ILLEV--DQIYHLACPAS-PVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-- 222
           + +      IL EV  D+IY+LA  +   V ++  P  T   + +GTL +L   + +G  
Sbjct: 64  LTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFE-QPEYTADVDAIGTLRLLEAIRILGEK 122

Query: 223 -AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEV 281
             +F   STSE+YG   E PQKET      P   RS Y   K  A  +T++Y    G+  
Sbjct: 123 KTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGLFA 177

Query: 282 RIARIFNTYGPR 293
               +FN   P 
Sbjct: 178 CNGILFNHESPL 189

Length = 345

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 76.7 bits (188), Expect = 9e-16
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRH 171
           R ++TG AGF+GS L+++L+     VI +DNF TG + NL      V   +  RF  I+ 
Sbjct: 17  RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG 76

Query: 172 DV-----VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKF 225
           D+      +     VD + H A   S      +P+ T   N+ G LNML  A+    + F
Sbjct: 77  DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF 136

Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
              ++S  YGD  + P+ E   G   P+   S Y   K   E     + R         R
Sbjct: 137 TYAASSSTYGDHPDLPKIEERIG--RPL---SPYAVTKYVNELYADVFARSYEFNAIGLR 191

Query: 286 IFNTYGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
            FN +G R   +     V+  ++   ++ +P+ + GDG  +R F Y+ +++ 
Sbjct: 192 YFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ 243

Length = 348

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score = 76.8 bits (189), Expect = 1e-15
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 38/254 (14%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP---RFEL----I 169
           L I + G  GF+GSHL +KL+      ++  + +  +  +L+     P   R +     I
Sbjct: 15  LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI 74

Query: 170 RHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT 228
           +HD  +E ++   D   +LA   +P  Y   P+ TI +N +  L ++        + +  
Sbjct: 75  KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 134

Query: 229 STSEVYGD------PLEHP--QKETYW---GNVNPI------GERSCYDEGKRTAETLTM 271
           ST EVYG       P +HP  Q   ++    + +P        +R  Y   K+  E L  
Sbjct: 135 STCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLI- 193

Query: 272 DYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQAIRRQPMTVYGD 320
            Y  GA  G+E  I R FN  GPRM    G         RV++ F    +RR+P+ +   
Sbjct: 194 -YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDG 252

Query: 321 GKQTRSFQYVSDLV 334
           G+  R+F Y+ D +
Sbjct: 253 GQSQRTFVYIKDAI 266

Length = 386

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 28/241 (11%)

Query: 117 LRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVV 174
           ++I+VTGGAGF+GS +V  +I +  D V+ +D   + G  ++L     + R+     D+ 
Sbjct: 1   MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60

Query: 175 EPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA--------- 218
           +   L+        D + HLA  +        P   I+TN++GT  +L  A         
Sbjct: 61  DRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDE 120

Query: 219 -KRVGAKFLLTSTSEVYGDPLEHP------QKETYWGNVNPIGERSCYDEGKRTAETLTM 271
            K+   +F   ST EVYGD L HP      ++   +         S Y   K +++ L  
Sbjct: 121 DKKNAFRFHHISTDEVYGD-LPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 272 DYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVS 331
            + R  G+   +    N YGP    +  +++   +  A+  +P+ +YG G Q R + YV 
Sbjct: 180 AWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237

Query: 332 D 332
           D
Sbjct: 238 D 238

Length = 352

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 64/231 (27%), Positives = 92/231 (39%), Gaps = 54/231 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDN-----FFTGRKDNLVHHFRNPRFELIRH 171
            I+VTGGAG +GS LV +++  G  ++IV D          R+      F + +   I  
Sbjct: 4   TILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELR--SRFPHDKLRFIIG 61

Query: 172 DVVEPILL-------EVDQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLA 218
           DV +   L         D ++H A        K       NP + IKTNV+GT N++  A
Sbjct: 62  DVRDKERLRRAFKERGPDIVFHAAA------LKHVPSMEDNPEEAIKTNVLGTKNVIDAA 115

Query: 219 KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA 277
              G  KF+  ST +                 VNP+   +     KR AE L +  +  +
Sbjct: 116 IENGVEKFVCISTDKA----------------VNPV---NVMGATKRVAEKLLLAKNEYS 156

Query: 278 G-VEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSF 327
              +    R  N  G R     G V+  F  Q  +  P+TV  D   TR F
Sbjct: 157 SSTKFSTVRFGNVLGSR-----GSVLPLFKKQIKKGGPLTVT-DPDMTRFF 201

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 74.6 bits (184), Expect = 4e-15
 Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 47/243 (19%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           I+VTGGAGF+GS+LV  L +RG  +++V+DN   G      H F N    +I   + +  
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG------HKFLNLADLVIADYIDKED 54

Query: 178 LLE---------VDQIYHL-ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227
            L+         ++ I+H  AC  +      +    ++ N   +  +L      G  F+ 
Sbjct: 55  FLDRLEKGAFGKIEAIFHQGACSDTTET---DGEYMMENNYQYSKRLLDWCAEKGIPFIY 111

Query: 228 TSTSEVYGDPLEHPQKET--YWGNVNPIGE-RSCYDE-GKRTAETLTMDYHRGAGVEVRI 283
            S++  YGD  E   +E       +N  G  +  +D+  +R      +      G+    
Sbjct: 112 ASSAATYGDG-EAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQV-VGL---- 165

Query: 284 ARIFNTYGPR------MCLDDGRVVSNFVAQAIRRQPMTV------YGDGKQTRSFQYVS 331
            R FN YGPR      M      V  +   Q      + +      + DG+Q R F YV 
Sbjct: 166 -RYFNVYGPREYHKGKM----ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVK 220

Query: 332 DLV 334
           D+V
Sbjct: 221 DVV 223

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 21/222 (9%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I+VTG  GF+GS+LV  L+ +G  V         R  +          E++  D+ +   
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRA-----LVRSGSDAVLLDGLPVEVVEGDLTDAAS 55

Query: 179 L-----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
           L       D+++HLA   S         +  +TNV GT N+L  A   G +  + TS+  
Sbjct: 56  LAAAMKGCDRVFHLAAFTSLWAKDRK--ELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113

Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
             G P +    ET     N     + Y   K  AE   ++     G++V I      +GP
Sbjct: 114 ALGGPPDGRIDET--TPWNERPFPNDYYRSKLLAELEVLEAAA-EGLDVVIVNPSAVFGP 170

Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
               D+G   +           +  Y  G    SF  V D+ 
Sbjct: 171 ---GDEGPTSTGLDVLDYLNGKLPAYPPGGT--SFVDVRDVA 207

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 31/231 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFEL----IRH- 171
            ++VTGG+GF G  LV +L++R G  V   D    G     +  +++P  E     I   
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA---LSAWQHPNIEFLKGDITDR 57

Query: 172 DVVEPILLEVDQIYHLACPASPVHYK--YNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLT 228
           + VE  L   D ++H A        +  Y  V     NV GT N+L   +R G  KF+ T
Sbjct: 58  NDVEQALSGADCVFHTAAIVPLAGPRDLYWEV-----NVGGTQNVLDACQRCGVQKFVYT 112

Query: 229 STSEVY--GDPLEHPQKETYWGNVNPIGERS--CYDEGKRTAETLTMDYHRGAGVEVRIA 284
           S+S V   G  + +  +        P        Y E K  AE + ++ +    +     
Sbjct: 113 SSSSVIFGGQNIHNGDETL------PYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCAL 166

Query: 285 RIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R    +GP     D  +V      A +     V+G G     F YV +L H
Sbjct: 167 RPAGIFGPG----DQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAH 213

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score = 71.7 bits (176), Expect = 5e-14
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 33/238 (13%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-- 173
            ++++ G  GF+G HL  ++++  D EV  +D     + D L     +PR      D+  
Sbjct: 2   KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM----QTDRLGDLVNHPRMHFFEGDITI 57

Query: 174 ----VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS 229
               +E  + + D I  L   A+P  Y   P++  + +    L ++  A + G   +  S
Sbjct: 58  NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117

Query: 230 TSEVYG-------DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVR 282
           TSEVYG       DP   P     +G +N    R  Y   K+  + +   Y    G+   
Sbjct: 118 TSEVYGMCPDEEFDPEASP---LVYGPINK--PRWIYACSKQLMDRVIWAYGMEEGLNFT 172

Query: 283 IARIFNTYGPRMCLDD--------GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           + R FN  GP   LD          RVV+ F+   +R +P+++   G Q R+F  + D
Sbjct: 173 LFRPFNWIGPG--LDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDD 228

Length = 347

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 70.7 bits (174), Expect = 7e-14
 Identities = 59/237 (24%), Positives = 88/237 (37%), Gaps = 45/237 (18%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I+VTG  G VGS +V  L  RG E +V    F   K+           +L   + V   
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVV----FRTSKE----------LDLTDQEAVRAF 46

Query: 178 LLEV--DQIYHLA--------CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFL 226
             +   D + HLA            P  +  +       N++   N++  A R G  K +
Sbjct: 47  FEKEKPDYVIHLAAKVGGIVANMTYPADFLRD-------NLLINDNVIHAAHRFGVKKLV 99

Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
              +S +Y D    P  E+      P      Y   KR    L   Y +  G +  I+ +
Sbjct: 100 FLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDY-ISVM 158

Query: 287 F-NTYGPRMCLDDGRVVSNFVAQAIRR---------QPMTVYGDGKQTRSFQYVSDL 333
             N YGP    D     S+ +   IR+         + +TV+G G   R F Y  DL
Sbjct: 159 PTNLYGPHDNFDPEN--SHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDL 213

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 52/253 (20%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF-------------FTGRK-DNLVHHFRN 163
            I+VTGGAG++GSH V +L+  G +V+VIDN                G   DNLV H   
Sbjct: 7   TILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFH--- 63

Query: 164 PRFELIRHDVVEPILLE--VDQIYHLA-------CPASPVHYKYNPVKTIKTNVMGTLNM 214
            + +L   + +E +      D + H A         A P+ Y  N       N++GT+N+
Sbjct: 64  -KVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDN-------NLVGTINL 115

Query: 215 LGLAKRVGAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY 273
           L +  + G K L+ S+S  VYG P E P  E +     P+   + Y   K   E +  D 
Sbjct: 116 LEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEF-----PLSATNPYGRTKLFIEEICRDI 170

Query: 274 HRGAGVEVRIA--RIFNTYG--PRMCL-DDGRVVSN----FVAQ-AI-RRQPMTVYGDGK 322
           H  +  E +I   R FN  G  P   + +D + + N    +V Q A+ RR  +TV+G+  
Sbjct: 171 HA-SDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDY 229

Query: 323 QTRSFQYVSDLVH 335
            T+    V D +H
Sbjct: 230 PTKDGTGVRDYIH 242

Length = 352

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 69.1 bits (169), Expect = 3e-13
 Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVV 174
           +R++VTGG+G++GSH   +L+  G +V+++DN    ++  L  +          +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 175 EPILLEVDQIYHLACPASPVHYK---------YNPVKTIKTNVMGTLNMLGLAKRVGAK- 224
              LL   +I H     + +H+            P++    NV GTL ++   +    K 
Sbjct: 61  NEALL--TEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRGAGV-EVR 282
            + +S++ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + 
Sbjct: 119 LIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 283 IARIFNTYGPR----MCLDDGRVVSN---FVAQAI--RRQPMTVYG------DGKQTRSF 327
           + R FN  G      M  D   + +N   ++AQ    RR  + ++G      DG   R +
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233

Query: 328 QYVSDL 333
            +V DL
Sbjct: 234 IHVMDL 239

Length = 338

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 68.1 bits (167), Expect = 6e-13
 Identities = 61/238 (25%), Positives = 92/238 (38%), Gaps = 54/238 (22%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP- 176
           +++VTG  GF+G  LVDKL+ RG+EV +            V +  N    ++  ++ +  
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRI-----------AVRNAENAEPSVVLAELPDID 49

Query: 177 ----ILLEVDQIYHLACPASPVHYKYNPVKT-----IKTNVMGTLNMLGLAKRVGAK-FL 226
               + L VD + HL   A+ VH   +          K N   T  +   A R G K F+
Sbjct: 50  SFTDLFLGVDAVVHL---AARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFV 106

Query: 227 LTSTSEVYG-----DPLEH---PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
             S+ +V G      P +    P  +  +G              K  AE   ++     G
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYG------------RSKLEAERALLELGASDG 154

Query: 279 VEVRIARIFNTYGPRMCLDDGRVVSNF--VAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           +EV I R    YGP        V  NF  + + I R      G  K  RS   + +LV
Sbjct: 155 MEVVILRPPMVYGP-------GVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLV 205

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 58/200 (29%), Positives = 85/200 (42%), Gaps = 38/200 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI-------VIDNFF-TGRKDNLVHHFRNPRFELI 169
           R++VTG  GF GS L   L + G +VI          N F     DN +   R      I
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRGD----I 61

Query: 170 R-HDVVEPILLEV--DQIYHLACPASP-VHYKY-NPVKTIKTNVMGTLNMLGLAKRVG-A 223
           R  + +   + E   + ++HLA  A P V   Y +PV+T +TNVMGT+N+L   +  G  
Sbjct: 62  RDLNALREAIREYEPEIVFHLA--AQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSV 119

Query: 224 K-FLLTSTSEVYGDPLEHPQKETYWGNV--NPIGERSCYDEGKRTAETLTMDYHR----- 275
           K  +  ++ + Y +      KE  WG    +P+G    Y   K  AE +   Y       
Sbjct: 120 KAVVNVTSDKCYEN------KEWGWGYRENDPLGGHDPYSSSKGCAELIISSYRNSFFNP 173

Query: 276 ----GAGVEVRIARIFNTYG 291
                 G+ +  AR  N  G
Sbjct: 174 ENYGKHGIAIASARAGNVIG 193

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 31/235 (13%)

Query: 120 VVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           +VTGG GF+G H+V  L+  G+  EV V D  F+          +   +  I  DV    
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITY--IEGDVTDKQ 58

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTS 231
            +   L   D + H A     V  K      +K NV GT N+L    + G + L+ TS+ 
Sbjct: 59  DLRRALQGSDVVIHTAA-IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSM 117

Query: 232 EV-----YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM----DYHRGAGVEVR 282
           EV     YG P+ +  + T +        +  Y E K  AE L +       +  G    
Sbjct: 118 EVVGPNSYGQPIVNGDETTPY----ESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYT 173

Query: 283 IA-RIFNTYGPRMCLDDGRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLVH 335
            A R    +G          +  F+ + ++        GD        YV ++  
Sbjct: 174 CALRPAGIFGEG-----DPFLFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAW 223

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 65.1 bits (159), Expect = 8e-12
 Identities = 63/271 (23%), Positives = 96/271 (35%), Gaps = 53/271 (19%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH----------HFRNPRF 166
           +++++ GG G+ G      L  RG EV ++DN    R D  +           H R   +
Sbjct: 1   MKVLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAW 60

Query: 167 --------ELIRHDVVEPILL-------EVDQIYHLAC-PASPVHYK--YNPVKTIKTNV 208
                   E    D  +   L       E D + H A   ++P       +   T   NV
Sbjct: 61  KELTGKTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNV 120

Query: 209 MGTLNMLGLAKRVG--AKFLLTSTSEVYGDP----LEHPQKETYWG--NVNPIGER--SC 258
           +GTLN+L   K        +   T   YG P     E      + G  +  P  ++  S 
Sbjct: 121 IGTLNLLFAIKEFDPDCHLVKLGTMGEYGTPNIDIPEGYITIEHNGRRDTLPYPKQAGSW 180

Query: 259 YDEGKRTAETLTMDYHRGAGV---EVRIARIFNTYGPRMCLDD------------GRVVS 303
           Y   K       M   +  G+   ++    ++ T       D+            G V++
Sbjct: 181 YHLSKVHDSHNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYDGVFGTVLN 240

Query: 304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            F  QA    P+TVYG G QTR F  + D V
Sbjct: 241 RFCVQAAIGHPLTVYGKGGQTRGFISIRDTV 271

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 64.1 bits (156), Expect = 1e-11
 Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 36/213 (16%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVI----DNFFTGRKDNLV---HHFRNPRFELIRHDV 173
           +TG  G  GS+L + L+++G EV  +     +F T R +++    H+    R +L   D+
Sbjct: 5   ITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL 64

Query: 174 VEPILL-------EVDQIYHLACPASPVHYKYN-PVKTIKTNVMGTLNML------GLAK 219
            +   L       +  +IY+LA   S V   +  P  T   + +GTL +L      GL K
Sbjct: 65  TDSSNLRRIIDEIKPTEIYNLAA-QSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIK 123

Query: 220 RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV 279
            V  KF   STSE+YG   E PQ ET      P   RS Y   K  A  +T++Y    G+
Sbjct: 124 SV--KFYQASTSELYGKVQEIPQNET-----TPFYPRSPYAAAKLYAHWITVNYREAYGL 176

Query: 280 EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRR 312
                 +FN   PR          NFV + I R
Sbjct: 177 FAVNGILFNHESPRRG-------ENFVTRKITR 202

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 62.7 bits (153), Expect = 3e-11
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 36/159 (22%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR----KDNLVH----HFRNPRFELI 169
            ++VTG  GF+ SH+V++L+  G +V       T R       L         N R E +
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVR-----GTVRSLSKSAKLKALLKAAGYNDRLEFV 55

Query: 170 RHDVVEPI---------LLEVDQIYHLACPASPVHYKYNPVKT--IKTNVMGTLNMLGLA 218
              +V+ +         L  VD + H+   ASP  +     +   I   V GTLN+L  A
Sbjct: 56  ---IVDDLTAPNAWDEALKGVDYVIHV---ASPFPFTGPDAEDDVIDPAVEGTLNVLEAA 109

Query: 219 KRVGA--KFLLTSTSEVYGDPLEHPQKETY----WGNVN 251
           K  G+  + +LTS+    GDP      + +    W ++ 
Sbjct: 110 KAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLT 148

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 39/197 (19%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIV----------------IDNFFTGRKDNLVHHFRNP 164
           +TG  GF+G  L++KL+    EV +                          + +      
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKAL--E 58

Query: 165 RFELIRHDVVEP-----------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLN 213
           R   +  D+ EP           +  EVD I H A  A+ V++         TNV+GT  
Sbjct: 59  RIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--AT-VNFVEPYSDLRATNVLGTRE 115

Query: 214 MLGLAKRVGAK-FLLTSTS----EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 268
           +L LAK++    F   ST+    E  G   E P K          G  + Y + K  AE 
Sbjct: 116 VLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQ 175

Query: 269 LTMDYHRGAGVEVRIAR 285
           L  +     G+ V I R
Sbjct: 176 LVREAAG--GLPVVIYR 190

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 67/245 (27%), Positives = 95/245 (38%), Gaps = 68/245 (27%)

Query: 106 GRVPVGIGRRRL-------RIVVTGGAGFVGSHLVDKLIDRGDEVIV-----------ID 147
           GR PV +    +        ++VTGG G +GS L  +++    + I+           ID
Sbjct: 233 GRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID 292

Query: 148 NFFTGRKDNLVHHFRNPRFEL--IR-HDVVEPIL--LEVDQIYHLACPASPVHYK----- 197
                +   L       RF +  +R  D VE  +   +VD ++H A        K     
Sbjct: 293 MELREKFPEL-----KLRFYIGDVRDRDRVERAMEGHKVDIVFHAAA------LKHVPLV 341

Query: 198 -YNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE 255
            YNP + IKTNV+GT N+   A + G  KF+L ST +                 VNP   
Sbjct: 342 EYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA----------------VNPT-- 383

Query: 256 RSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRR 312
            +     KR AE L    +R   G G    + R  N  G R     G V+  F  Q    
Sbjct: 384 -NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEG 437

Query: 313 QPMTV 317
            P+TV
Sbjct: 438 GPLTV 442

Length = 588

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 26/148 (17%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVID---NFFTGRKDNLVHHFRNPRFELIRHDVVE 175
           + VTGG GF+G HLV +L++ G +V+V+    +     +          R  ++  D+ +
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 176 PIL-----------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK 224
           P L            +VD + H A  AS   ++       +TN+ GT ++L LA R+  +
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCA--AS-YDFQAPNEDAWRTNIDGTEHVLELAARLDIQ 117

Query: 225 -FLLTSTSEVYG--------DPLEHPQK 243
            F   ST+ V G          L   Q 
Sbjct: 118 RFHYVSTAYVAGNREGNIRETELNPGQN 145

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 58/239 (24%), Positives = 84/239 (35%), Gaps = 62/239 (25%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL----VHHFRNPR------FE 167
           +I++ GG  F+G  LV++L+  G +V V   F  GR        V H    R       E
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKPDLPEGVEHIVGDRNDRDALEE 58

Query: 168 LIRH---DVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK 224
           L+     DVV      VD         +P                     L   K    +
Sbjct: 59  LLGGEDFDVV------VDT-----IAYTPRQ---------------VERALDAFKGRVKQ 92

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC--------YDEGKRTAETLTMDYHRG 276
           ++  S++ VY  P      E+      P+ E           Y  GKR AE + ++    
Sbjct: 93  YIFISSASVYLKPGR-VITES-----TPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAF 146

Query: 277 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
               VR   I   YGP    D    ++ F  +  R +P+ V GDG     F +V DL  
Sbjct: 147 PYTIVRPPYI---YGPG---DYTGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLAR 199

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 37/214 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNF------FTGRKDNLVHHFRNPRFELI 169
           ++++TG +GFVG  L ++L+     + +I+ID           R   +      P     
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPSGAPRVTQIAGDLAVPA---- 57

Query: 170 RHDVVEPILLEV-DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFL 226
              ++E +     D ++HLA   S    + +     + NV GT N+L   ++ G   +F+
Sbjct: 58  ---LIEALANGRPDVVFHLAAIVSG-GAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFV 113

Query: 227 LTSTSEVYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
            TS+  VYG PL +P    T    ++P    S Y   K   E L  DY R   V+ R  R
Sbjct: 114 FTSSLAVYGLPLPNPVTDHT---ALDPA---SSYGAQKAMCELLLNDYSRRGFVDGRTLR 167

Query: 286 IFNTYGPRMCLDDGRVVSNFVAQA----IRRQPM 315
           +     P +C+  GR   N  A A    I R+P+
Sbjct: 168 L-----PTVCVRPGR--PNKAASAFASTIIREPL 194

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 34/233 (14%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV--- 173
             +V GG+GF+G HLV++L+ RG+  V V D   T   D       + R +    D+   
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELD----PSSSGRVQFHTGDLTDP 56

Query: 174 --VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLT 228
             +E    E   + ++H    ASP H   N     K NV GT N++   ++ G  K + T
Sbjct: 57  QDLEKAFNEKGPNVVFHT---ASPDH-GSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYT 112

Query: 229 STSEVY--GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG----VEVR 282
           S++ V   G  +     E+      P   +  Y+E K  AE L +  +          +R
Sbjct: 113 SSASVVFNGQDI-INGDESL---PYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALR 168

Query: 283 IARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
            A IF   GP     D ++V   +  A   +     GDG     F YV ++ H
Sbjct: 169 PAGIF---GPG----DRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAH 214

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 62/219 (28%), Positives = 85/219 (38%), Gaps = 48/219 (21%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVI----DNFFTGRKDNLVH--HFRNPRFELIRH--- 171
           +TG  G  GS+L + L+ +G EV  I     NF T R D++    H    R +L  H   
Sbjct: 11  ITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKL--HYGD 68

Query: 172 -----------DVVEPILLEVDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNML---- 215
                      D ++P     D++Y+LA   S V   +  P  T      G L +L    
Sbjct: 69  LSDASSLRRWLDDIKP-----DEVYNLAA-QSHVAVSFEMPDYTADVVATGALRLLEAVR 122

Query: 216 --GLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY 273
             G       K+    +SE+YG     PQ ET      P   RS Y   K  A   T++Y
Sbjct: 123 LHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPFHPRSPYAVAKVAAHWYTVNY 176

Query: 274 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRR 312
               G+      +FN   PR     G    NFV + I R
Sbjct: 177 REAYGLFACNGILFNHESPRR----GE---NFVTRKITR 208

Length = 340

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 44/203 (21%), Positives = 78/203 (38%), Gaps = 33/203 (16%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIV---------------IDNFFTGRKDNLVHHFR 162
            +++TG  GF+G++L+ +L+ R +   +               + +       NL     
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 163 NPRFELIRHDVVEPIL-----------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGT 211
             R +++  D+ +P L            EVD I H    A+ V++ Y   +    NV+GT
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIH--NGAN-VNWVYPYEELKPANVLGT 117

Query: 212 LNMLGLA-KRVGAKFLLTSTSEVYGDPLEHPQKETYWGN--VNPIGERSCYDEGKRTAET 268
             +L LA           ST  V+     +   +    +   +  G  + Y + K  AE 
Sbjct: 118 KELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWVAEK 177

Query: 269 LTMDYHRGAGVEVRIARIFNTYG 291
           L  +     G+ V I R  N +G
Sbjct: 178 LLREAAN-RGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 50/229 (21%), Positives = 78/229 (34%), Gaps = 53/229 (23%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           ++I++TG  G +G+ L  + +    EVI  D                   ++   D V  
Sbjct: 1   MKILITGANGQLGTELR-RALPGEFEVIATDR---------------AELDITDPDAVLE 44

Query: 177 ILLEV--DQIYHLA------CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT 228
           ++ E   D + + A         S       P      N  G  N+   A  VGA+ +  
Sbjct: 45  VIRETRPDVVINAAAYTAVDKAES------EPELAFAVNATGAENLARAAAEVGARLVHI 98

Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           ST  V+      P KET     NP+     Y   K   E           + +R + ++ 
Sbjct: 99  STDYVFDGEKGGPYKET--DTPNPLNV---YGRSKLAGEEAVRAAGPRHLI-LRTSWVYG 152

Query: 289 TYGPRMCLDDGRVVSNFVAQAIR----RQPMTVYGDGKQTRSFQYVSDL 333
            YG           +NFV   +R     + + V  D  Q  S  Y  DL
Sbjct: 153 EYG-----------NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDL 188

Length = 281

>gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 29/251 (11%)

Query: 102 GAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH 160
           GA+    P    +RR R+++ G  GF+G+HL ++L+   + EV  +D        + +  
Sbjct: 301 GARLNSKPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLD-----IGSDAISR 355

Query: 161 FR-NPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLN 213
           F  +PRF  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L 
Sbjct: 356 FLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLK 415

Query: 214 MLGLAKRVGAKFLLTSTSEVYG---DPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETL 269
           ++    +   + +  STSEVYG   D   +  ++T    V PI  +R  Y   K+  + +
Sbjct: 416 IIRYCVKYNKRIIFPSTSEVYGMCTDK--YFDEDTSNLIVGPINKQRWIYSVSKQLLDRV 473

Query: 270 TMDYHRGAGVEVRIARIFNTYGPRMCLDD--------GRVVSNFVAQAIRRQPMTVYGDG 321
              Y    G+   + R FN  GPR  LD+         R ++  +   +   P+ +   G
Sbjct: 474 IWAYGEKEGLRFTLFRPFNWMGPR--LDNLNAARIGSSRAITQLILNLVEGSPIKLVDGG 531

Query: 322 KQTRSFQYVSD 332
           KQ R F  + D
Sbjct: 532 KQKRCFTDIRD 542

Length = 660

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 31/174 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI--------VIDNF-FTGRKDNLVHHFRNPR-FE 167
           +++VTG  GF GS L   L++ G EV           + F        +  HF + R   
Sbjct: 6   KVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAA 65

Query: 168 LIRHDV--VEPILLEVDQIYHLACPASP-VHYKY-NPVKTIKTNVMGTLNMLGLAKRVGA 223
            +R  +   +P     + ++HLA  A P V   Y +P++T +TNVMGT+N+L   + +G+
Sbjct: 66  KLRKAIAEFKP-----EIVFHLA--AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGS 118

Query: 224 K--FLLTSTSEVYGDPLEHPQKETYWG--NVNPIGERSCYDEGKRTAETLTMDY 273
               +  ++ + Y +       E  WG    +P+G    Y   K  AE +   Y
Sbjct: 119 VKAVVNVTSDKCYRN------DEWVWGYRETDPLGGHDPYSSSKACAELVIASY 166

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 53.5 bits (129), Expect = 5e-08
 Identities = 48/221 (21%), Positives = 74/221 (33%), Gaps = 34/221 (15%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VE 175
           V G +G +G  +  +L  RG +V ++    +G K         P  E++  D      V 
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSR--SGSKLA-----WLPGVEIVAADAMDASSVI 56

Query: 176 PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235
                 D IYH A PA     +  P   +  NV+        A+  GAK +L     +YG
Sbjct: 57  AAARGADVIYHCANPAYTRWEELFP--PLMENVVAA------AEANGAKLVLPGNVYMYG 108

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGK-RTA-ETLTMDYHRGAGVEVRIARIFNTYGPR 293
                P  E       P   +     G+ R   E   +  H    +   I R  + YGP 
Sbjct: 109 PQAGSPITEDT--PFQPTTRK-----GRIRAEMEERLLAAHAKGDIRALIVRAPDFYGP- 160

Query: 294 MCLDDGRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDL 333
                          AI +       G+      + Y+ D+
Sbjct: 161 ---GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDV 198

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 52.3 bits (126), Expect = 9e-08
 Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 25/179 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFEL------- 168
           RI++TGG G +GS L   L  R   D VI  D     RK    H   +  FE        
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASDI----RKPP-AHVVLSGPFEYLDVLDFK 55

Query: 169 -IRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL 227
            +   VV     ++  I HLA   S V  K NP      N+ G  N+L LA+    +  +
Sbjct: 56  SLEEIVVN---HKITWIIHLAALLSAVGEK-NPPLAWDVNMNGLHNVLELAREHNLRIFV 111

Query: 228 TSTSEVYGDPLEHPQKETYWGNV-NPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
            ST   +G     P+  T    +  P   R+ Y   K  AE L   YH   GV+ R  R
Sbjct: 112 PSTIGAFGP--TTPRNNTPDDTIQRP---RTIYGVSKVAAELLGEYYHHKFGVDFRSLR 165

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 20/124 (16%)

Query: 121 VTGGAGFVGSHLVDKLIDRG----------DEVIVIDNFFTGRKDNLVHHFRNPRFELIR 170
           VTG +GFV SH+V++L++RG           +V  ++       D           +L  
Sbjct: 3   VTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVN--HLLDLDAKPGRLELAVADLTD 60

Query: 171 HDVVEPILLEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRVGA--KFL 226
               + ++     ++H+   A+PV +  K  P + IK  + GTLN L  A    +  +F+
Sbjct: 61  EQSFDEVIKGCAGVFHV---ATPVSFSSKD-PNEVIKPAIGGTLNALKAAAAAKSVKRFV 116

Query: 227 LTST 230
           LTS+
Sbjct: 117 LTSS 120

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 52.1 bits (126), Expect = 1e-07
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 26/131 (19%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVI---DNF--FTGRKDNLVHHFRNP--RFEL--I 169
           ++VTGG G +GS L  +++    + I++   D F  +  R++ L   + +P  RF +  +
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQE-LRQEYNDPKLRFFIGDV 59

Query: 170 R-HDVVEPIL--LEVDQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLAKR 220
           R  + +E  +    VD ++H A        K      YNP++ IKTNV+GT N+   A  
Sbjct: 60  RDRERLERAMEQHGVDTVFHAAA------LKHVPLVEYNPMEAIKTNVLGTENVAEAAIE 113

Query: 221 VGAK-FLLTST 230
            G + F+L ST
Sbjct: 114 NGVEKFVLIST 124

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 39/203 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR------------------------GDEVIVIDNFFTGR 153
            +++TG  GF+G++L+ +L+DR                         D     D     R
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 154 KDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLN 213
            + +      P   L      E +   VD I H    A+ V++ +   +    NV+GT  
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQE-LAENVDLIIH---NAALVNHVFPYSELRGANVLGTAE 117

Query: 214 MLGLAKRVGAKFL-LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD 272
           +L LA     K L   S+  V            +                +   + L   
Sbjct: 118 VLRLAATGKPKPLHYVSSISVGETEYYSNFTVDF----------DEISPTRNVGQGLAGG 167

Query: 273 YHRGAGVEVRIARIFNTYGPRMC 295
           Y R   V  ++ R     G  + 
Sbjct: 168 YGRSKWVAEKLVREAGDRGLPVT 190

Length = 382

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 23/149 (15%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVI--VIDNFFTGRKDNLVHHFR-----NPRFELIRHDV 173
           VTG +GF+GS LV +L+ RG  V   V D       +  V H         R +L + D+
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDP----GDEKKVAHLLELEGAKERLKLFKADL 58

Query: 174 VEP--ILLEVDQ---IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFL 226
           ++       +D    ++H+A P      +    + I+  V GTLN+L    +  +  + +
Sbjct: 59  LDYGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVV 117

Query: 227 LT-STSEVYGDPLEHPQK---ETYWGNVN 251
            T S + V  +P     K   E+ W +++
Sbjct: 118 FTSSVAAVVWNPNRGEGKVVDESCWSDLD 146

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 30/212 (14%)

Query: 120 VVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNP-RFELIRHDV-- 173
           +VTGG GF+G H++  L++R +   E+ V+D  F           +       I  D+  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62

Query: 174 VEPILLE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TS 229
           +  +      V  + H A     V    N  +  + NV GT  +L    +   K L+ TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVD-VFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 230 TSEV-----YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH----RGAGVE 280
           + EV      G P+ +  ++T + + +       Y   K  AE + ++ +    +  G  
Sbjct: 122 SIEVAGPNFKGRPIFNGVEDTPYEDTSTPP----YASSKLLAENIVLNANGAPLKQGGYL 177

Query: 281 VRIA-RIFNTYGPRMCLDDGRVVSNFVAQAIR 311
           V  A R    YG     +    ++      + 
Sbjct: 178 VTCALRPMYIYG-----EGSHFLTEIFDFLLT 204

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 56/230 (24%), Positives = 88/230 (38%), Gaps = 46/230 (20%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPR--FELIRH-- 171
           +I++TG  G +G  LV  L +RG EVI      TGR    +      +P    E IR   
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVI-----GTGRSRASLFKLDLTDPDAVEEAIRDYK 55

Query: 172 -DVVEPI----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFL 226
            DV+  I       VD+               +P    + NV+   N+   AK VGA+ +
Sbjct: 56  PDVI--INCAAYTRVDKCES------------DPELAYRVNVLAPENLARAAKEVGARLI 101

Query: 227 LTSTSEVY-GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
             ST  V+ G   + P KE      NP+     Y + K   E   ++ +    + +R + 
Sbjct: 102 HISTDYVFDGK--KGPYKEE--DAPNPLN---VYGKSKLLGEVAVLNANPRYLI-LRTSW 153

Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           ++      +   +   V   +  A  R+   V     Q  S  Y +DL  
Sbjct: 154 LY----GELKNGEN-FVEWMLRLAAERK--EVNVVHDQIGSPTYAADLAD 196

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I++ G  GF+G  L  +L+++G EV ++      R    +         ++  D+ +   
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLV-----RNTKRLSKEDQEPVAVVEGDLRDLDS 55

Query: 179 L-----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
           L      VD + HLA   +P   +       + +V GT N+L  AK  G K F+  S+  
Sbjct: 56  LSDAVQGVDVVIHLA--GAPRDTRDF----CEVDVEGTRNVLEAAKEAGVKHFIFISSLG 109

Query: 233 VYGDPLEHPQKE 244
            YGD  E  +  
Sbjct: 110 AYGDLHEETEPS 121

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 50/222 (22%), Positives = 81/222 (36%), Gaps = 39/222 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RI++TG  G +G  LV +L   G  V+                    + +L   + +E +
Sbjct: 1   RILITGANGQLGRELVQQLSPEGRVVVA---------------LTRSQLDLTDPEALERL 45

Query: 178 LLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235
           L  +  D + + A        + +P K    N +   N+   A R GA+ +  ST  V+ 
Sbjct: 46  LRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFD 105

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              + P +E      NP+     Y + K   E         A + VR + ++   G R  
Sbjct: 106 GEGKRPYRED--DATNPLN---VYGQSKLAGEQAVRAAGPNALI-VRTSWLYGGGGGR-- 157

Query: 296 LDDGRVVSNFVAQAIR----RQPMTVYGDGKQTRSFQYVSDL 333
                   NFV   +R     + + V  D  Q  S  Y  DL
Sbjct: 158 --------NFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDL 189

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 47/221 (21%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           ++I++TG  GF+G +L+ +L ++ D+ I    FF  R+        +   EL      + 
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDI----FFYDRE--------SDESEL------DD 42

Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTSTSEVY 234
            L   D I+HLA    P        +    NV  T  +L    R G K   LL+S+ +  
Sbjct: 43  FLQGADFIFHLAGVNRPKD----EAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQAA 98

Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
            D              NP      Y + K  AE L  +Y R  G  V I R+ N +G + 
Sbjct: 99  LD--------------NP------YGKSKLAAEELLQEYARETGAPVYIYRLPNVFG-KW 137

Query: 295 CLDD-GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           C  +    V+ F     R  P+ +        +  Y+ D+V
Sbjct: 138 CRPNYNSAVATFCYNIARDLPIQINDPA-AELTLVYIDDVV 177

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 20/126 (15%)

Query: 119 IVVTGGAGFVGSHLVDKL--IDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           I+VTG AG +G  L  +L    R   V  +D     R+         P+ E +R D+ +P
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDR----RRPPGSP----PKVEYVRLDIRDP 52

Query: 177 ------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFL-LTS 229
                    E D + HLA    P     +  +  + NV GT N+L      G   + +TS
Sbjct: 53  AAADVFREREADAVVHLAFILDPPR---DGAERHRINVDGTQNVLDACAAAGVPRVVVTS 109

Query: 230 TSEVYG 235
           +  VYG
Sbjct: 110 SVAVYG 115

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 18/116 (15%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           ++++VTG  GFVGS +V  L+++G+EV V+      R  +   +      E++  D+ +P
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLV-----RPTSDRRNLEGLDVEIVEGDLRDP 55

Query: 177 ILLE-----VDQIYHLACPASPVHYKY---NPVKTIKTNVMGTLNMLGLAKRVGAK 224
             L         ++H+A       Y+    +P +    NV GT N+L  A   G +
Sbjct: 56  ASLRKAVAGCRALFHVA-----ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVE 106

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 53/185 (28%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           ++VTGG+G +G  +   L  RG  +V+V+      R+D +VH         I  D     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS-----RRDVVVH------NAAILDDG---- 45

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK-----RVGAKFLLTSTSE 232
              +D                   + I+ NV+GT  +L  A+     +   +F+L S+  
Sbjct: 46  -RLIDLT------------GSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNT 289
                          G          Y   K   + L   +     G G+          
Sbjct: 93  GLFG---------APGLGG-------YAASKAALDGLAQQWASEGWGNGLPATAVACGTW 136

Query: 290 YGPRM 294
            G  M
Sbjct: 137 AGSGM 141

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR 162
           +I+VTG  GFVG  +V +L+ RG EV         R         
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAA-----VRNPEAAAALA 41

Length = 275

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 50/223 (22%), Positives = 76/223 (34%), Gaps = 44/223 (19%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I+VTG  G +G  L   L +RG EV+        R +           +L   + V  ++
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVA-----LDRPE----------LDLTDPEAVAALV 45

Query: 179 LEV--DQIYHLACPA-SPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY 234
            E   D + + A  A + V   +  P      N +G  N+       GA  +  ST  V+
Sbjct: 46  REARPDVVVNAA--AYTAVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTDYVF 103

Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
                 P +E       P+     Y   K   E   +  +    + +R A ++  YG   
Sbjct: 104 DGAKGGPYRED--DPTGPLNV---YGRTKLAGEQAVLAANPRHLI-LRTAWVYGEYGN-- 155

Query: 295 CLDDGRVVSNFVA----QAIRRQPMTVYGDGKQTRSFQYVSDL 333
                    NFV      A  R  + V  D  Q  S     DL
Sbjct: 156 ---------NFVKTMLRLAAERDELRVVDD--QLGSPTSARDL 187

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRK-DNLV 158
           I+VTGGAGF+GS++V  L D+G  +++V+DN   G K  NLV
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV 43

Length = 308

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE--P 176
           +++TGG G  G+ ++ + +D   + I I +    ++D++   + N + +    DV +   
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYRS 66

Query: 177 ILLE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML--GLAKRVGAKFLLTSTS 231
           IL     VD IYH A        +++P++ +KTNV+GT N+L   +A  V     L++  
Sbjct: 67  ILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCLSTDK 126

Query: 232 EVY 234
            VY
Sbjct: 127 AVY 129

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 43.6 bits (103), Expect = 9e-05
 Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 48/221 (21%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVI------------DNFFTGRKDNLVHHF--RNP 164
           +++TG  GF+G++L+++L+ R  +  VI            +      +   + H      
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLARE 61

Query: 165 RFELIRHDVVEPIL-----------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLN 213
           R E++  D+ EP L             VD I H     + V++ Y   +    NV+GT  
Sbjct: 62  RIEVVAGDLSEPRLGLSDAEWERLAENVDTIVH---NGALVNWVYPYSELRGANVLGTRE 118

Query: 214 MLGLAKRVGAK-FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD 272
           +L LA    AK     ST  V          E       P G    Y + K  AE L   
Sbjct: 119 VLRLAASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELLV-- 176

Query: 273 YHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAI 310
             R A   G+ V I R             GR++ N    AI
Sbjct: 177 --REASDRGLPVTIVRP------------GRILGNSYTGAI 203

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVI 146
           +IV+TGG GF+G  L  +L   G EV+V+
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVL 29

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGDEVI 144
           +++ VTG  GF+GS +V +L+  G EV+
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVV 28

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVI 146
           I++TGG GF+G  L  +L  RG EV ++
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTIL 28

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 35/151 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVI------DNFFTGRK-------DNLVHHFR-- 162
            +++TG  GF+G  L++KL+    ++  I       +  +  +       D L    R  
Sbjct: 2   SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61

Query: 163 NPRFE----LIRHDVVEP-----------ILLEVDQIYHLACPASPVHYKYNPVKTIKTN 207
           NP FE     I  D+ EP           ++ EV+ I H A  A+ V +     + +  N
Sbjct: 62  NPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCA--AT-VTFDERLDEALSIN 118

Query: 208 VMGTLNMLGLAKRV--GAKFLLTSTSEVYGD 236
           V+GTL +L LAKR      F+  ST+ V GD
Sbjct: 119 VLGTLRLLELAKRCKKLKAFVHVSTAYVNGD 149

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-- 176
           ++VTG  G+VG  LV +L+  G +V  +        + L     + R  ++R D+ +P  
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRAL----VRSPEKLADRPWSERVTVVRGDLEDPES 56

Query: 177 ---ILLEVDQIYHL 187
               L  +D  Y+L
Sbjct: 57  LRAALEGIDTAYYL 70

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 29/139 (20%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIV---IDNFFTGRKDNLVHHFRNPRFELIRHDVV 174
           R  VTGG GF+G  LV +L+DR  E  V   +      R + L  ++   R   +  D+ 
Sbjct: 2   RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLT 61

Query: 175 EPIL----------LEVDQIYHLA------CPASPVHYKYNPVKTIKTNVMGTLNMLGLA 218
           EP L           ++D + HLA                        NV GT N++ LA
Sbjct: 62  EPGLGLSEADIAELGDIDHVVHLAAIYDLTADEE---------AQRAANVDGTRNVVELA 112

Query: 219 KRVGAK-FLLTSTSEVYGD 236
           +R+ A  F   S+  V GD
Sbjct: 113 ERLQAATFHHVSSIAVAGD 131

Length = 657

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVI 146
           I++TGG G +G  L  +L   G +V ++
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTIL 28

Length = 297

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIV 145
            + V G  GF+G ++V++L  RG +VIV
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIV 29

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           G  ++ F  QA    P+TVYG G QTR F  + D V
Sbjct: 283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTV 318

Length = 442

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 21/192 (10%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVE 175
           + VTG +G++ S +V  L+ RG  V       T RK     L       R +L + D++E
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 176 PILLE-----VDQIYHLACPASPVHYKYNPVKT--IKTNVMGTLNMLGLAKRVGA--KFL 226
               E      D ++H    ASPV +     +T  I   + GT+N+L   K   +  + +
Sbjct: 68  ESSFEQAIEGCDAVFH---TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVI 124

Query: 227 LTSTSE--VYGDPLEHPQ---KETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVE 280
           LTS++   ++  P         ET++ + +   E ++ Y   K  AE    ++ +  G++
Sbjct: 125 LTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGID 184

Query: 281 VRIARIFNTYGP 292
           + +       GP
Sbjct: 185 MVVLNPGFICGP 196

Length = 322

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 24/123 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF-ELIRHDVVEP 176
           +++V G  G VG H+V +L+DRG +V  +               R+P   E +     E 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRAL--------------VRDPSQAEKLEAAGAEV 46

Query: 177 ILLEVDQIYHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLL 227
           ++ ++     LA     +               +T   +  G +N++  AK+ G K F+L
Sbjct: 47  VVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVL 106

Query: 228 TST 230
            S+
Sbjct: 107 VSS 109

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	99.98
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.98
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.98
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.95
PLN02686	367	cinnamoyl-CoA reductase	99.95
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.94
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.93
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.92
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.91
PLN00016	378	RNA-binding protein; Provisional	99.91
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.91
PRK07201	657	short chain dehydrogenase; Provisional	99.9
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.89
CHL00194	317	ycf39 Ycf39; Provisional	99.89
PLN02503	605	fatty acyl-CoA reductase 2	99.89
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.87
PRK05717	255	oxidoreductase; Validated	99.86
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.85
PRK06194	287	hypothetical protein; Provisional	99.85
PRK05865	854	hypothetical protein; Provisional	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.84
PRK09135	249	pteridine reductase; Provisional	99.84
PRK05876	275	short chain dehydrogenase; Provisional	99.84
PRK06482	276	short chain dehydrogenase; Provisional	99.84
PRK12320	699	hypothetical protein; Provisional	99.83
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.83
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.82
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.82
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.82
PRK07067	257	sorbitol dehydrogenase; Provisional	99.82
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.82
PRK08324	681	short chain dehydrogenase; Validated	99.82
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.82
PRK07890	258	short chain dehydrogenase; Provisional	99.82
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.82
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.81
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.81
PRK07775	274	short chain dehydrogenase; Provisional	99.81
PRK06180	277	short chain dehydrogenase; Provisional	99.81
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06128	300	oxidoreductase; Provisional	99.81
PRK06138	252	short chain dehydrogenase; Provisional	99.8
PRK07024	257	short chain dehydrogenase; Provisional	99.8
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.8
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.8
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.8
PRK06179	270	short chain dehydrogenase; Provisional	99.8
PRK06500	249	short chain dehydrogenase; Provisional	99.8
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.79
PRK08263	275	short chain dehydrogenase; Provisional	99.79
PLN02253	280	xanthoxin dehydrogenase	99.79
PRK07985	294	oxidoreductase; Provisional	99.79
PLN02260	668	probable rhamnose biosynthetic enzyme	99.79
PRK06523	260	short chain dehydrogenase; Provisional	99.79
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK06181	263	short chain dehydrogenase; Provisional	99.79
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK06398	258	aldose dehydrogenase; Validated	99.79
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.79
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.79
PRK06196	315	oxidoreductase; Provisional	99.79
PRK07774	250	short chain dehydrogenase; Provisional	99.79
PRK12827	249	short chain dehydrogenase; Provisional	99.79
PRK08628	258	short chain dehydrogenase; Provisional	99.79
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.79
PRK05993	277	short chain dehydrogenase; Provisional	99.79
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PLN03209	576	translocon at the inner envelope of chloroplast su	99.78
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.78
PRK06914	280	short chain dehydrogenase; Provisional	99.78
PRK06182	273	short chain dehydrogenase; Validated	99.78
PRK08264	238	short chain dehydrogenase; Validated	99.78
PRK07856	252	short chain dehydrogenase; Provisional	99.78
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.78
PRK07063	260	short chain dehydrogenase; Provisional	99.78
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.78
PRK08643	256	acetoin reductase; Validated	99.78
PRK12829	264	short chain dehydrogenase; Provisional	99.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.78
PRK07806	248	short chain dehydrogenase; Provisional	99.77
PRK08589	272	short chain dehydrogenase; Validated	99.77
PRK06114	254	short chain dehydrogenase; Provisional	99.77
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.77
PRK05875	276	short chain dehydrogenase; Provisional	99.77
PRK07074	257	short chain dehydrogenase; Provisional	99.77
PRK09186	256	flagellin modification protein A; Provisional	99.77
PRK12746	254	short chain dehydrogenase; Provisional	99.77
PRK06101	240	short chain dehydrogenase; Provisional	99.77
PRK06701	290	short chain dehydrogenase; Provisional	99.77
PRK06123	248	short chain dehydrogenase; Provisional	99.77
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK08339	263	short chain dehydrogenase; Provisional	99.77
PRK06197	306	short chain dehydrogenase; Provisional	99.77
PRK07060	245	short chain dehydrogenase; Provisional	99.77
PRK09134	258	short chain dehydrogenase; Provisional	99.77
PRK12747	252	short chain dehydrogenase; Provisional	99.77
PRK08265	261	short chain dehydrogenase; Provisional	99.77
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK05854	313	short chain dehydrogenase; Provisional	99.77
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.76
PRK05872	296	short chain dehydrogenase; Provisional	99.76
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.76
PRK12743	256	oxidoreductase; Provisional	99.76
PRK06949	258	short chain dehydrogenase; Provisional	99.76
PRK07825	273	short chain dehydrogenase; Provisional	99.76
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.76
PRK10538	248	malonic semialdehyde reductase; Provisional	99.76
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.76
PRK07478	254	short chain dehydrogenase; Provisional	99.76
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK08267	260	short chain dehydrogenase; Provisional	99.76
PRK07814	263	short chain dehydrogenase; Provisional	99.76
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.75
PRK06841	255	short chain dehydrogenase; Provisional	99.75
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK07326	237	short chain dehydrogenase; Provisional	99.75
PRK12742	237	oxidoreductase; Provisional	99.75
PRK12828	239	short chain dehydrogenase; Provisional	99.75
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.75
PRK05693	274	short chain dehydrogenase; Provisional	99.75
PRK12937	245	short chain dehydrogenase; Provisional	99.75
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.75
PRK08226	263	short chain dehydrogenase; Provisional	99.75
PRK07102	243	short chain dehydrogenase; Provisional	99.75
PRK07454	241	short chain dehydrogenase; Provisional	99.75
PRK09242	257	tropinone reductase; Provisional	99.75
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.75
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.75
PRK05866	293	short chain dehydrogenase; Provisional	99.75
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.75
PRK08703	239	short chain dehydrogenase; Provisional	99.74
PRK07035	252	short chain dehydrogenase; Provisional	99.74
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.74
PRK09291	257	short chain dehydrogenase; Provisional	99.74
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK05867	253	short chain dehydrogenase; Provisional	99.74
PRK12744	257	short chain dehydrogenase; Provisional	99.74
PRK05650	270	short chain dehydrogenase; Provisional	99.74
PRK07904	253	short chain dehydrogenase; Provisional	99.74
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.74
PRK06172	253	short chain dehydrogenase; Provisional	99.74
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.73
PRK08251	248	short chain dehydrogenase; Provisional	99.73
PRK07576	264	short chain dehydrogenase; Provisional	99.73
PRK07677	252	short chain dehydrogenase; Provisional	99.73
PRK07062	265	short chain dehydrogenase; Provisional	99.73
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.73
PRK07577	234	short chain dehydrogenase; Provisional	99.73
PRK06483	236	dihydromonapterin reductase; Provisional	99.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.73
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.73
PRK12939	250	short chain dehydrogenase; Provisional	99.73
PRK08278	273	short chain dehydrogenase; Provisional	99.73
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK07831	262	short chain dehydrogenase; Provisional	99.72
PRK09072	263	short chain dehydrogenase; Provisional	99.72
PRK06139	330	short chain dehydrogenase; Provisional	99.72
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.72
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.72
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.72
PRK08017	256	oxidoreductase; Provisional	99.72
PRK07109	334	short chain dehydrogenase; Provisional	99.72
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.72
PRK07023	243	short chain dehydrogenase; Provisional	99.72
PRK08219	227	short chain dehydrogenase; Provisional	99.71
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06057	255	short chain dehydrogenase; Provisional	99.71
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK06484	520	short chain dehydrogenase; Validated	99.71
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.71
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05855	582	short chain dehydrogenase; Validated	99.71
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.71
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.71
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK07069	251	short chain dehydrogenase; Validated	99.7
PLN02780	320	ketoreductase/ oxidoreductase	99.7
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK07791	286	short chain dehydrogenase; Provisional	99.7
PRK07832	272	short chain dehydrogenase; Provisional	99.7
PRK07041	230	short chain dehydrogenase; Provisional	99.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.69
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.69
PRK06125	259	short chain dehydrogenase; Provisional	99.68
PRK06924	251	short chain dehydrogenase; Provisional	99.68
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06198	260	short chain dehydrogenase; Provisional	99.68
PRK07201	657	short chain dehydrogenase; Provisional	99.68
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.68
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.68
PRK06940	275	short chain dehydrogenase; Provisional	99.68
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06953	222	short chain dehydrogenase; Provisional	99.67
PRK05884	223	short chain dehydrogenase; Provisional	99.67
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.67
PRK07578	199	short chain dehydrogenase; Provisional	99.67
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.66
PRK06484	520	short chain dehydrogenase; Validated	99.66
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.66
PRK08303	305	short chain dehydrogenase; Provisional	99.65
KOG0725	270	consensus Reductases with broad range of substrate	99.65
PRK08177	225	short chain dehydrogenase; Provisional	99.65
PRK12367	245	short chain dehydrogenase; Provisional	99.64
PRK08862	227	short chain dehydrogenase; Provisional	99.64
PRK05599	246	hypothetical protein; Provisional	99.64
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.63
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.62
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.61
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.6
PLN00015	308	protochlorophyllide reductase	99.6
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.59
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.59
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.59
KOG1208	314	consensus Dehydrogenases with different specificit	99.59
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.54
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.54
COG1028	251	FabG Dehydrogenases with different specificities (	99.54
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
KOG2774	366	consensus NAD dependent epimerase [General functio	99.49
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.49
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.47
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.45
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.45
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.43
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.41
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.39
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.36
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.36
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.36
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.35
COG2910	211	Putative NADH-flavin reductase [General function p	99.34
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.33
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.31
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.26
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.25
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.24
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.23
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.17
PTZ00325	321	malate dehydrogenase; Provisional	99.09
PRK06720	169	hypothetical protein; Provisional	98.95
PLN00106	323	malate dehydrogenase	98.93
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.8
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.7
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.69
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.66
PRK08309	177	short chain dehydrogenase; Provisional	98.65
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.62
PRK09620	229	hypothetical protein; Provisional	98.44
PRK05086	312	malate dehydrogenase; Provisional	98.38
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.25
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.17
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.15
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.09
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.01
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.98
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.97
PRK14982	340	acyl-ACP reductase; Provisional	97.96
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.96
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.95
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.92
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.91
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.89
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.89
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.85
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.8
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.79
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.77
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.75
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.73
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.69
PRK05442	326	malate dehydrogenase; Provisional	97.68
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.67
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.67
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.66
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.62
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.6
PLN02383	344	aspartate semialdehyde dehydrogenase	97.58
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.56
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.52
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.51
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.49
PRK06223	307	malate dehydrogenase; Reviewed	97.49
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.48
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.44
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.42
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.42
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.41
PTZ00117	319	malate dehydrogenase; Provisional	97.39
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.38
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.38
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.35
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.35
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.34
PLN02602	350	lactate dehydrogenase	97.33
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.32
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.26
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.25
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.22
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.22
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.22
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.21
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.19
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.18
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.17
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.14
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.14
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.11
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.08
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.06
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.06
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.05
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.04
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	97.03
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.02
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.01
PRK04148	134	hypothetical protein; Provisional	96.99
COG3268	382	Uncharacterized conserved protein [Function unknow	96.95
PRK08223	287	hypothetical protein; Validated	96.9
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.89
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.87
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.85
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.84
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.82
PRK08328	231	hypothetical protein; Provisional	96.82
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.82
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.81
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.8
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.79
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.78
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.77
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.75
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.75
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.71
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.7
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.67
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.64
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.61
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.59
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	96.54
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.51
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.49
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.45
PRK07411	390	hypothetical protein; Validated	96.43
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.4
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.38
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.34
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.31
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.3
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.29
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.29
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.28
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.28
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.24
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.24
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.22
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.18
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.14
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.13
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.1
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.06
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.05
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.05
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.04
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.92
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.87
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.86
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.84
PRK09496	453	trkA potassium transporter peripheral membrane com	95.84
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.83
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.82
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.8
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.76
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.72
PRK09496	453	trkA potassium transporter peripheral membrane com	95.7
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.66
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.63
PRK07877	722	hypothetical protein; Provisional	95.61
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.61
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	95.6
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.59
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.59
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.49
TIGR01408	1008	Ube1 ubiquitin-activating enzyme E1. This model re	95.48
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.44
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.43
PRK08655	437	prephenate dehydrogenase; Provisional	95.4
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.36
PRK10637	457	cysG siroheme synthase; Provisional	95.35
PRK14851	679	hypothetical protein; Provisional	95.25
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	95.23
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.17
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.12
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.11
PRK14852	989	hypothetical protein; Provisional	95.06
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.04
PRK06153	393	hypothetical protein; Provisional	95.04
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.02
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.02
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.99
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.99
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.92
PRK13304	265	L-aspartate dehydrogenase; Reviewed	94.89
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.86
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.85
PRK06444	197	prephenate dehydrogenase; Provisional	94.85
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	94.83
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	94.82
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	94.81
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	94.77
PRK13303	265	L-aspartate dehydrogenase; Provisional	94.76
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.75
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.74
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.73
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	94.7
PRK07574	385	formate dehydrogenase; Provisional	94.69
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	94.65
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.64
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.63
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.63
PLN00203	519	glutamyl-tRNA reductase	94.62
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	94.61
KOG1496	332	consensus Malate dehydrogenase [Energy production	94.56
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.54
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.54
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.53
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	94.52
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.51
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	94.5
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.48
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.45
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.45
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	94.43
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.42
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.31
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	94.25
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.2
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.18
PLN02928	347	oxidoreductase family protein	94.14
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.05
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	93.98

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.4e-59  Score=449.95  Aligned_cols=334  Identities=85%  Similarity=1.301  Sum_probs=275.8

Q ss_pred             ccccCCCccccccccccCCCCCCCCCCCCCCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHhhccccccCCCCCCCCCc
Q 019794            2 KLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPF   81 (335)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (335)
                      ||||||+++|||+++++.+.++.|+||+.++++|+|||++||++|||++|+|+||+++++||+..|+++++++..+....
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (436)
T PLN02166          3 QLHKQMSVNHRRDEEIPTSQSSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSLSRLGPAESTSLI   82 (436)
T ss_pred             chhhcCCccccCCCCCCccccCCCCCCCCCCCccccchHHHHHHhhhHHHHHHHHHHHHHHHhhCCccccCCcccccccc
Confidence            99999999999999999888999999977777999999999999999999999999999999999988766664432222


Q ss_pred             ccc---chhhhhhhhhhcccCCCCCCCCCCCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc
Q 019794           82 HAL---TANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV  158 (335)
Q Consensus        82 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~  158 (335)
                      ...   .....................+++|.....+.|+|||||||||||++|+++|+++|++|++++|..........
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~  162 (436)
T PLN02166         83 TRSVSIAVTDSPPSSSTFNSSGGGGRTGRVPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV  162 (436)
T ss_pred             ccccccccccCccchhhccccccccccCCCCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh
Confidence            110   00000111111111222345678999999999999999999999999999999999999999986543333332


Q ss_pred             cccCCCceEEEeccccchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCC
Q 019794          159 HHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL  238 (335)
Q Consensus       159 ~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~  238 (335)
                      .......++++.+|+.++.+.++|+|||+|+...+.....++...+++|+.||.+++++|++.++++|++||..+|+...
T Consensus       163 ~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~  242 (436)
T PLN02166        163 HLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPL  242 (436)
T ss_pred             hhccCCceEEEECccccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCC
Confidence            22234578899999999988999999999987655555567888999999999999999999988999999999999877


Q ss_pred             CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEe
Q 019794          239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVY  318 (335)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~  318 (335)
                      ..+.+|+.|....|..+.+.|+.+|..+|++++.+++..+++++++||+++|||++....+.++..++..+.+++++.++
T Consensus       243 ~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~  322 (436)
T PLN02166        243 EHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY  322 (436)
T ss_pred             CCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence            77888887776677777889999999999999999888899999999999999987655567888999999999999999


Q ss_pred             cCCCceeeceecccccC
Q 019794          319 GDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       319 g~g~~~~~~v~v~Dva~  335 (335)
                      +++++.++|+||+|+|+
T Consensus       323 g~g~~~rdfi~V~Dva~  339 (436)
T PLN02166        323 GDGKQTRSFQYVSDLVD  339 (436)
T ss_pred             CCCCeEEeeEEHHHHHH
Confidence            99999999999999974

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=2.1e-54  Score=414.82  Aligned_cols=328  Identities=69%  Similarity=1.129  Sum_probs=265.7

Q ss_pred             CCCccccccccccCCCCCCCCCCCCCCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHhhccccccCCCCCCCCCccc--
Q 019794            6 QSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPILSRLGPPQELHPFHA--   83 (335)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   83 (335)
                      .|+|+||++++++ +.+++|+|||.||++|+|||+||+++|||++|+|+||++++.||++.|+++++++. ...++..  
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (442)
T PLN02206          2 ASELINRRHEETQ-PTADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTIFPSSSQPSPY-SVDPLSGYG   79 (442)
T ss_pred             CccccccCCCCCC-CCCCCCCCCCCCCcccCccHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcCCCCcc-ccccccccc
Confidence            4899999998776 56999999999999999999999999999999999999999999999876544331 1111111  


Q ss_pred             -cchhhhhhhhhhc------ccCCCCCCCCCCCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc
Q 019794           84 -LTANQQRQSFQFH------RTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN  156 (335)
Q Consensus        84 -~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~  156 (335)
                       -..+.........      ....+....+++|..+..++|+|||||||||||++|+++|+++|++|++++|......+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~  159 (442)
T PLN02206         80 IRPDESYVPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN  159 (442)
T ss_pred             ccccccccccccceecccccccccccccCCcCccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh
Confidence             0000000000000      011222446788999999999999999999999999999999999999998764433333


Q ss_pred             cccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          157 LVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       157 ~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      ....+...+++++.+|+.++.+.++|+|||+|+...+.....++...+++|+.|+.+++++|++.+++||++||..+|+.
T Consensus       160 ~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~  239 (442)
T PLN02206        160 VMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  239 (442)
T ss_pred             hhhhccCCceEEEECCccChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCC
Confidence            32233446789999999999999999999999876554555678889999999999999999999899999999999998


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeE
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMT  316 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~  316 (335)
                      ....+.+|+.|...+|..+.+.|+.+|.++|.+++.+.+..+++++++||+++|||+++...+.+++.++..+..++++.
T Consensus       240 ~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~  319 (442)
T PLN02206        240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  319 (442)
T ss_pred             CCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcE
Confidence            77778888887766777777899999999999999998888999999999999999876555678889999999999999


Q ss_pred             EecCCCceeeceecccccC
Q 019794          317 VYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       317 ~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++++++.++|+||+|+|+
T Consensus       320 i~g~G~~~rdfi~V~Dva~  338 (442)
T PLN02206        320 VYGDGKQTRSFQFVSDLVE  338 (442)
T ss_pred             EeCCCCEEEeEEeHHHHHH
Confidence            9999999999999999974

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.1e-42  Score=298.60  Aligned_cols=221  Identities=80%  Similarity=1.294  Sum_probs=214.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      .+++|+||||+||||++||++|..+|++|++++......+.++........++++..|+..+.+.++|.|||+|++..+.
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp~  105 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASPP  105 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCCc
Confidence            34799999999999999999999999999999999999998888888889999999999999999999999999999999


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH  274 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a  274 (335)
                      ++..++.+.+.+|+.|+.+++.+|++.++||++.||+.|||++..++..|+.|.++.|..+..+|+..|..+|.++..|.
T Consensus       106 ~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~  185 (350)
T KOG1429|consen  106 HYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYH  185 (350)
T ss_pred             ccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          275 RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       275 ~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.|+.+.|.|+.++|||+++..+++++++|+.+++++.+++++|+|.+.|+|+||+|+++
T Consensus       186 k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Ve  246 (350)
T KOG1429|consen  186 KQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVE  246 (350)
T ss_pred             cccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999864

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6.6e-35  Score=273.29  Aligned_cols=220  Identities=28%  Similarity=0.399  Sum_probs=179.3

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc------cCCCceEEEeccccch-----hcc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH------FRNPRFELIRHDVVEP-----ILL  179 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~D~~~~-----~~~  179 (335)
                      ++..++|+|||||||||||++|+++|+++|++|++++|............      ....++.++.+|+.+.     .+.
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            45567789999999999999999999999999999998654322111110      0113577889999775     357


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      ++|+|||+|+.........++...+++|+.||.+++++|++.++ +|||+||..+||.....+..|+     .+..|.+.
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~~~p~~~  164 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RIGRPLSP  164 (348)
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CCCCCCCh
Confidence            89999999987555455567778899999999999999999987 8999999999997655555665     34456678


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|..+|.+++.+++..+++++++||+++|||++.+.  ...+++.++.++.+++++.++++|++.++|+||+|+|+
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~  243 (348)
T PRK15181        165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243 (348)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHH
Confidence            999999999999998888899999999999999986432  13578899988999999998999999999999999974

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-34  Score=253.70  Aligned_cols=210  Identities=32%  Similarity=0.550  Sum_probs=181.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhc-------cCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-------LEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~vD~Vih~A~  189 (335)
                      |+||||||+||||++.+.+|++.|++|+++|+......+.+...    ...++.+|+.|..+       .++|.|||+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            58999999999999999999999999999999877666554432    16889999988633       36999999999


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      ......+..+|.++++.|+.||.+|+++|++.++ +|||.||+.+||.+...|+.|+     .|..|.++||.||.+.|+
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPYG~sKlm~E~  151 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPYGRSKLMSEE  151 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcchhHHHHHHH
Confidence            8888888899999999999999999999999998 8999999999999999999999     788889999999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCC------CC-CcchHHHHHHHHHhCCC-eEEec------CCCceeeceeccccc
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMC------LD-DGRVVSNFVAQAIRRQP-MTVYG------DGKQTRSFQYVSDLV  334 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~------~~-~~~~i~~~~~~~~~~~~-~~~~g------~g~~~~~~v~v~Dva  334 (335)
                      +++.+++..+++++++|-+|+.|-...      +. .+.+++..++.++.+.+ +.++|      ||.-.||||||.|+|
T Consensus       152 iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA  231 (329)
T COG1087         152 ILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLA  231 (329)
T ss_pred             HHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHH
Confidence            999999999999999999999985321      11 25577777777765544 88887      567799999999998


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       232 ~  232 (329)
T COG1087         232 D  232 (329)
T ss_pred             H
Confidence            4

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.5e-34  Score=250.74  Aligned_cols=212  Identities=32%  Similarity=0.528  Sum_probs=185.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCC-CCccccccccCCCceEEEeccccchh-----cc--CCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEPI-----LL--EVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--~vD~Vih  186 (335)
                      |++|||||+||||+.+++.+++...  +|++++..-- ...+.+......+++.++++|+.|..     +.  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            5899999999999999999999876  4677765321 23344455556789999999998763     33  5999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCC--CCCCCcCCCCCCCCCCChHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEH--PQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~--~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      .|+-.+..++-.++..++++|+.||.+|++++++...  ||+++||..|||+-...  ..+|+     .|.+|.++|++|
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPYSAS  155 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPYSAS  155 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCcchh
Confidence            9998888888889999999999999999999999874  99999999999986543  56777     799999999999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+..+++++.+.+|++++|.|++|-|||.+  .+..++|.++..++.|.+++++|+|.+.|||+||+|=|+
T Consensus       156 KAasD~lVray~~TYglp~~ItrcSNNYGPyq--fpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~  226 (340)
T COG1088         156 KAASDLLVRAYVRTYGLPATITRCSNNYGPYQ--FPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCR  226 (340)
T ss_pred             hhhHHHHHHHHHHHcCCceEEecCCCCcCCCc--CchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHH
Confidence            99999999999999999999999999999987  458899999999999999999999999999999999663

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=8.2e-32  Score=252.29  Aligned_cols=216  Identities=24%  Similarity=0.391  Sum_probs=172.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEecccc-ch-----hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EP-----ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~-----~~~~vD~Vih~A  188 (335)
                      ||+|||||||||||++|+++|++. |++|++++|+....    ........++++.+|+. +.     .+.++|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL----GDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH----HHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            468999999999999999999987 69999998854211    11222346888999986 32     356899999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC-CCC-CCCCChHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNP-IGERSCYDEGKRTA  266 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~-~~~-~~~~~~Y~~sK~~~  266 (335)
                      +...+.....++...+++|+.++.+++++|++.+.++|++||..+||.....+.+|+.... ..| ..+.+.|+.+|..+
T Consensus        77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~  156 (347)
T PRK11908         77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLM  156 (347)
T ss_pred             ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHH
Confidence            8755555566788889999999999999999988899999999999875554555553210 011 23557899999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCC------CCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCL------DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~------~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.++.+.+++++++||+++|||+...      ...++++.++..+..++++.++++|++.++|+|++|+|+
T Consensus       157 e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~  231 (347)
T PRK11908        157 DRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGID  231 (347)
T ss_pred             HHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHH
Confidence            999999988889999999999999998532      124578888888999999888888999999999999974

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=8.5e-32  Score=255.72  Aligned_cols=223  Identities=26%  Similarity=0.417  Sum_probs=168.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccc--cCCCceEEEeccccch-----hccCCCEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-----ILLEVDQI  184 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~~vD~V  184 (335)
                      ..+.|+|||||||||||++|+++|+++ |++|++++|+...........  ....+++++.+|+.+.     ++.++|+|
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            345679999999999999999999998 589999988643221111000  0123688999999775     45679999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcC--------------CCC
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYW--------------GNV  250 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~--------------~~~  250 (335)
                      ||+|+...+..+..++...+..|+.++.+++++|++.+.+||++||..+||.....+.+|+..              ...
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~  170 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC  170 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence            999986554444455667778999999999999988878999999999998754333333211              000


Q ss_pred             --CC-CCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC---------CcchHHHHHHHHHhCCCeEEe
Q 019794          251 --NP-IGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD---------DGRVVSNFVAQAIRRQPMTVY  318 (335)
Q Consensus       251 --~~-~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~---------~~~~i~~~~~~~~~~~~~~~~  318 (335)
                        .+ ..+.+.|+.+|..+|++++.+++..+++++++||++||||++...         ...++..++..+.+++++.++
T Consensus       171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  250 (386)
T PLN02427        171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV  250 (386)
T ss_pred             ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence              00 123467999999999999998887899999999999999975311         123566677788888999888


Q ss_pred             cCCCceeeceecccccC
Q 019794          319 GDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       319 g~g~~~~~~v~v~Dva~  335 (335)
                      +++++.++|+||+|+|+
T Consensus       251 g~g~~~r~~i~V~Dva~  267 (386)
T PLN02427        251 DGGQSQRTFVYIKDAIE  267 (386)
T ss_pred             CCCCceECcEeHHHHHH
Confidence            99999999999999974

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.98  E-value=2.7e-31  Score=255.53  Aligned_cols=223  Identities=27%  Similarity=0.328  Sum_probs=167.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc------cc----------c--cccCCCceEEEeccc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD------NL----------V--HHFRNPRFELIRHDV  173 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~------~~----------~--~~~~~~~~~~~~~D~  173 (335)
                      ...++|+||||||+||||++|+++|+++|++|+++++.......      ..          .  ......+++++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            34678899999999999999999999999999999864321110      00          0  000123588999999


Q ss_pred             cch-----hcc--CCCEEEEccCCCCCCCccCC---hhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCC
Q 019794          174 VEP-----ILL--EVDQIYHLACPASPVHYKYN---PVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       174 ~~~-----~~~--~vD~Vih~A~~~~~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~  241 (335)
                      .+.     .+.  ++|+|||+|+.........+   +...+++|+.|+.+++++|++.++  +||++||..+||... .+
T Consensus       123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~  201 (442)
T PLN02572        123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-ID  201 (442)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CC
Confidence            875     233  58999999975433222222   345678999999999999999875  799999999998643 22


Q ss_pred             CCCCcC---------CCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC---------------
Q 019794          242 QKETYW---------GNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD---------------  297 (335)
Q Consensus       242 ~~E~~~---------~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~---------------  297 (335)
                      .+|...         ....+..+.+.|+.+|.++|.+++.+++.+|++++++||++||||++...               
T Consensus       202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~  281 (442)
T PLN02572        202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGV  281 (442)
T ss_pred             CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccc
Confidence            332210         00124566788999999999999999988899999999999999985321               


Q ss_pred             CcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          298 DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       298 ~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ...+++.++.++.+++++.++|+|++.|+|+||+|+|+
T Consensus       282 ~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~  319 (442)
T PLN02572        282 FGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVR  319 (442)
T ss_pred             hhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHH
Confidence            02467778888888888888999999999999999974

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.98  E-value=2.7e-31  Score=234.72  Aligned_cols=208  Identities=35%  Similarity=0.567  Sum_probs=174.4

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEccCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLACPA  191 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~~~  191 (335)
                      |||||||||||++++++|+++|+.|+.+.|...........    .++.++..|+.+.     .+.  ++|+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999888865433221111    1778888888765     233  469999999864


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      .......++...++.|+.++.+++++|++.++ ++|++||..+|+.....+.+|+     .+..+.+.|+.+|...|+++
T Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~~~~~~Y~~~K~~~e~~~  151 (236)
T PF01370_consen   77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPINPLSPYGASKRAAEELL  151 (236)
T ss_dssp             SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGCCHSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccc
Confidence            32222356788999999999999999999998 9999999999999877777887     45577788999999999999


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCC-CCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPR-MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~-~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.+.++++++++++||+++|||. .......+++.++..+.+++++.+++++++.++|+|++|+|+
T Consensus       152 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  217 (236)
T PF01370_consen  152 RDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAE  217 (236)
T ss_dssp             HHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHH
Confidence            99998889999999999999998 223457899999999999999999999999999999999974

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.98  E-value=4.1e-31  Score=266.56  Aligned_cols=225  Identities=25%  Similarity=0.444  Sum_probs=180.2

Q ss_pred             CCCCCCCCCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccch------hcc
Q 019794          107 RVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILL  179 (335)
Q Consensus       107 ~~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~  179 (335)
                      +-|.-...++|+|||||||||||++|+++|+++ |++|++++|.......    ......++++.+|+.+.      ++.
T Consensus       306 ~~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        306 SKPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLGHPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             ccchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcCCCceEEEeccccCcHHHHHHHhc
Confidence            334333457889999999999999999999986 7999999986532211    11234688899999753      356


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC-CCCC-CCCC
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNPI-GERS  257 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~-~~~~-~~~~  257 (335)
                      ++|+|||+||...+..+..++...+++|+.++.+++++|++.+.+|||+||..+||.....+.+|+.+.. ..|. .+.+
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s  461 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRW  461 (660)
T ss_pred             CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCcc
Confidence            8999999999766555566778899999999999999999988899999999999976555677774421 1122 3456


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC------CCcchHHHHHHHHHhCCCeEEecCCCceeeceecc
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL------DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVS  331 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~------~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~  331 (335)
                      .|+.+|.++|.+++.+++.++++++++||+++|||++..      ....+++.++..+.+++++.+++++++.++|+|++
T Consensus       462 ~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~  541 (660)
T PRK08125        462 IYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR  541 (660)
T ss_pred             chHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH
Confidence            899999999999999988889999999999999998532      12357888888998898988889999999999999


Q ss_pred             cccC
Q 019794          332 DLVH  335 (335)
Q Consensus       332 Dva~  335 (335)
                      |+|+
T Consensus       542 Dva~  545 (660)
T PRK08125        542 DGIE  545 (660)
T ss_pred             HHHH
Confidence            9974

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=2.8e-31  Score=240.78  Aligned_cols=206  Identities=32%  Similarity=0.450  Sum_probs=159.8

Q ss_pred             EEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCCC
Q 019794          120 VVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPAS  192 (335)
Q Consensus       120 lVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~~  192 (335)
                      |||||+||||++|+++|+++|  ++|.++++........  ........+++.+|++++     ++.++|+|||+|++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            699999999999999999999  6899998865433211  111223334889999875     7889999999998654


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCC---CCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL-EHP---QKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~-~~~---~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      ... ....+.++++|+.||+|++++|++.++ |+||+||.++++.+. ..+   .+|..+   .+....+.|+.||+.+|
T Consensus        79 ~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   79 PWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPYAESKALAE  154 (280)
T ss_pred             ccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCchHHHHHHHH
Confidence            322 346778999999999999999999998 899999999887622 222   234422   22335678999999999


Q ss_pred             HHHHHHHh---h--hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHR---G--AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~---~--~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++++++..   +  ..++.++|||..||||+.    ..+.+.+...+..+......++++...+|+||+|+|.
T Consensus       155 ~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d----~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~  223 (280)
T PF01073_consen  155 KAVLEANGSELKNGGRLRTCALRPAGIYGPGD----QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAH  223 (280)
T ss_pred             HHHHhhcccccccccceeEEEEeccEEeCccc----ccccchhhHHHHhcccceeecCCCceECcEeHHHHHH
Confidence            99999765   2  249999999999999984    5566777777777767777799988999999999973

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=1.6e-30  Score=244.29  Aligned_cols=213  Identities=30%  Similarity=0.505  Sum_probs=165.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecCCCCCc-cccccccCCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIV-IDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~-~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      ||+|||||||||||++++++|+++|+++++ +++...... ...........++++.+|+.+.     .+.  ++|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            469999999999999999999999987554 444321111 1111111223577888998774     233  4999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---------CC-eEEEEecccccCCCC--CCCCCCCcCCCCCCCC
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---------GA-KFLLTSTSEVYGDPL--EHPQKETYWGNVNPIG  254 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~-r~v~iSS~~v~~~~~--~~~~~E~~~~~~~~~~  254 (335)
                      +||........+++..++++|+.|+.+++++|.+.         ++ ++|++||..+|+...  ..+.+|+     .+..
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~~  155 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPYA  155 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCCC
Confidence            99875443334567889999999999999999863         33 899999999998642  2356666     4556


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      +.+.|+.+|.++|.+++.++++.+++++++||+++|||+..  ...+++.++..+..++++.+++++++.++|+||+|+|
T Consensus       156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a  233 (355)
T PRK10217        156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF--PEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHA  233 (355)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC--cccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHH
Confidence            67899999999999999998888999999999999999863  3457888888888888888889999999999999997


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       234 ~  234 (355)
T PRK10217        234 R  234 (355)
T ss_pred             H
Confidence            4

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=7e-31  Score=236.16  Aligned_cols=216  Identities=21%  Similarity=0.283  Sum_probs=164.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc--cccccc-CCCceEEEeccccch-----hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD--NLVHHF-RNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .+++|+||||+||||++|+++|+++||.|++++|+++..+.  .+.+.- ...++.++.+|+.++     ++.+||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            57899999999999999999999999999999999876433  122221 233578888888665     7889999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCC-----CCCCCCCCCcCCCCCCCC-CCCh
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGD-----PLEHPQKETYWGNVNPIG-ERSC  258 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~-----~~~~~~~E~~~~~~~~~~-~~~~  258 (335)
                      .|.+....... ...+.++.++.||.|++++|++.. + |+|++||..+...     ......+|+.|++.+... ...+
T Consensus        85 ~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   85 TASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             eCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence            99875543332 455899999999999999999998 5 8999999655432     234588999998766532 2378


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|..+|+..++++++.+++.+++.|+.|+||...+..+... ..+....+|..-. +.+  ....||||+|||+
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~-~~~l~~i~G~~~~-~~n--~~~~~VdVrDVA~  236 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSL-NALLKLIKGLAET-YPN--FWLAFVDVRDVAL  236 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhH-HHHHHHHhccccc-CCC--CceeeEeHHHHHH
Confidence            99999999999999999999999999999999998755333333 3333444443211 122  3345999999984

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.5e-30  Score=243.89  Aligned_cols=214  Identities=22%  Similarity=0.312  Sum_probs=168.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----cc--CCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----LL--EVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--~vD~Vih~  187 (335)
                      ++|+||||||+||||++++++|+++|++|++++|+................+.++.+|+.+..     +.  ++|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            578999999999999999999999999999999875433211111111235677888987752     22  47999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCC-CCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      ||.........++...+++|+.++.+++++|++.+ + ++|++||..+|+.... .+.+|+     .+..+.+.|+.+|.
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y~~sK~  157 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPYSSSKA  157 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcchhHHH
Confidence            98644444455778899999999999999998876 4 8999999999986432 345555     45567789999999


Q ss_pred             HHHHHHHHHHhhh-------CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGA-------GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~-------~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++|.+++.+++++       +++++++||+++|||+.. ....+++.++..+..++++.+ +++++.++|+|++|+|+
T Consensus       158 ~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~-~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~  233 (349)
T TIGR02622       158 CAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDW-AEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLS  233 (349)
T ss_pred             HHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcc-hhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHH
Confidence            9999999987654       899999999999999752 235678889998888887765 78899999999999874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=5e-31  Score=249.01  Aligned_cols=217  Identities=29%  Similarity=0.398  Sum_probs=187.7

Q ss_pred             hhcccCCCCCCCCCCCCCCC-------CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc---cccccccC
Q 019794           94 QFHRTSSFGAKTGRVPVGIG-------RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK---DNLVHHFR  162 (335)
Q Consensus        94 ~~~~~~~~~~~~~~~p~~~~-------~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~---~~~~~~~~  162 (335)
                      ...++..++|+++|.|+..+       ..+|+||||||+|.||+++|+++++.+. +++++++++.+..   .++...++
T Consensus       221 ~~lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~  300 (588)
T COG1086         221 GQLREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP  300 (588)
T ss_pred             cccccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC
Confidence            33567778899999988776       4789999999999999999999999987 8888888765433   22333334


Q ss_pred             CCceEEEeccccch-----hccC--CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEeccccc
Q 019794          163 NPRFELIRHDVVEP-----ILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY  234 (335)
Q Consensus       163 ~~~~~~~~~D~~~~-----~~~~--vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~  234 (335)
                      ..++..+-+|+.|.     ++.+  +|+|||+|+..+.+..+.+|.+.+++|+.||.|++++|.+.++ +||++||.   
T Consensus       301 ~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD---  377 (588)
T COG1086         301 ELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD---  377 (588)
T ss_pred             CcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC---
Confidence            57788889999886     4566  9999999999999999999999999999999999999999998 89999997   


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHh
Q 019794          235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIR  311 (335)
Q Consensus       235 ~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~  311 (335)
                                      ...+|.+.||.||+.+|.+++.++.+.   +.+++++|+|||.|.+     ++++|.|.+++.+
T Consensus       378 ----------------KAV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~  436 (588)
T COG1086         378 ----------------KAVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAE  436 (588)
T ss_pred             ----------------cccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHc
Confidence                            345677999999999999999987643   3899999999999975     8999999999999


Q ss_pred             CCCeEEecCCCceeeceecccccC
Q 019794          312 RQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       312 ~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+++++ .+++..|-|+.++|+|+
T Consensus       437 GgplTv-Tdp~mtRyfMTI~EAv~  459 (588)
T COG1086         437 GGPLTV-TDPDMTRFFMTIPEAVQ  459 (588)
T ss_pred             CCCccc-cCCCceeEEEEHHHHHH
Confidence            999997 89999999999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.5e-30  Score=241.71  Aligned_cols=213  Identities=21%  Similarity=0.319  Sum_probs=160.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc-ccccc-CCCceEEEeccccch-----hccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHF-RNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .++|+|+||||+||||++|+++|+++|++|++++|+....... ..... ....++++.+|+.+.     ++.++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            3577999999999999999999999999999999875432211 11111 123578888998764     4678999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecc-cccCCCCC---CCCCCCcCCCCC-CCCCCChHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS-EVYGDPLE---HPQKETYWGNVN-PIGERSCYD  260 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~-~v~~~~~~---~~~~E~~~~~~~-~~~~~~~Y~  260 (335)
                      +|++.     ..++...+++|+.|+.+++++|++.++ +||++||. .+|+....   .+.+|+.|.+.. +..+.+.|+
T Consensus        88 ~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            99853     246788899999999999999999887 89999995 68875432   347888775433 344668899


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|..+|++++.++++.+++++++||++||||+........+..++ .+..+.... ++  +..++||||+|+|+
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~  233 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVAL  233 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHH
Confidence            9999999999999888899999999999999986432222333333 334444332 33  45789999999984

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=3.7e-30  Score=240.76  Aligned_cols=214  Identities=27%  Similarity=0.329  Sum_probs=166.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccccc------CCCceEEEeccccch-----hcc--CCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF------RNPRFELIRHDVVEP-----ILL--EVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~------~~~~~~~~~~D~~~~-----~~~--~vD  182 (335)
                      |+||||||+||||++|+++|+++|++|++++|...... ..+....      ....++++.+|+.|.     .+.  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999998754211 1111100      123578899999875     233  479


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~----r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      +|||+|+.........++...+++|+.|+.+++++|++.+.    +||++||..+||.....+.+|+     .+..+.+.
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~  155 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRSP  155 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCCh
Confidence            99999997554334445677888999999999999998763    7999999999997655566776     56677889


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-CcchHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-~~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.||..+|.+++.++++++++++..|+.++|||+.... ....+..++..+..+++ ..++|+|++.++|+||+|+|+
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence            999999999999999888899999999999999974221 12345556666666664 455699999999999999974

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.2e-29  Score=239.52  Aligned_cols=214  Identities=28%  Similarity=0.426  Sum_probs=164.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      .++|+|||||||||||+++++.|+++|++|++++|........     .....+++.+|+.+.     .+.++|+|||+|
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-----DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-----ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            3568999999999999999999999999999999854221110     011246777888764     356899999999


Q ss_pred             CCCCCCC-ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC----CCCCCcCCCCCCCCCCChHHHH
Q 019794          189 CPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH----PQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       189 ~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~----~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      +...... ...++...+..|+.++.+++++|++.++ +||++||..+|+.....    +..|+.   ..+..+.+.|+.+
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~---~~p~~p~s~Yg~s  170 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD---AWPAEPQDAYGLE  170 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc---CCCCCCCCHHHHH
Confidence            8643322 2234556678999999999999999887 89999999999865321    233431   1255677899999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHh-CCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~-~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|.+++.++..++++++++||+++|||+.....  ..++..++..+.. +.++.+++++++.++|+|++|+++
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~  246 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE  246 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence            999999999998888999999999999999754322  2346677777665 467888899999999999999974

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=1.8e-29  Score=235.62  Aligned_cols=219  Identities=20%  Similarity=0.272  Sum_probs=158.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--cccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .++|+||||||+||||++|+++|+++|++|++++|+.......  ........+++++.+|+.++     .+.++|+|||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            4578999999999999999999999999999888875432110  01111113578889998775     3568999999


Q ss_pred             ccCCCCCCCccCCh-hhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCC----CCCCCCCcCCCC----CCCCC
Q 019794          187 LACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDPL----EHPQKETYWGNV----NPIGE  255 (335)
Q Consensus       187 ~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~~~~~----~~~~~E~~~~~~----~~~~~  255 (335)
                      +|+...  ....++ ..++++|+.|+.+++++|.+. ++ +||++||..+|+...    ..+.+|+.|...    .+..+
T Consensus        87 ~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p  164 (338)
T PLN00198         87 VATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP  164 (338)
T ss_pred             eCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence            998532  122233 356799999999999999886 45 899999999997532    335566655321    12345


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEec-CCCc----eeeceec
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYG-DGKQ----TRSFQYV  330 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g-~g~~----~~~~v~v  330 (335)
                      .+.|+.+|.++|.+++.++++++++++++||++||||++.......+. ++..+..++++.+.+ ++.+    .++|+||
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V  243 (338)
T PLN00198        165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHV  243 (338)
T ss_pred             cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEH
Confidence            678999999999999999988899999999999999986432223332 334556666665555 3322    3799999


Q ss_pred             ccccC
Q 019794          331 SDLVH  335 (335)
Q Consensus       331 ~Dva~  335 (335)
                      +|+|+
T Consensus       244 ~D~a~  248 (338)
T PLN00198        244 EDVCR  248 (338)
T ss_pred             HHHHH
Confidence            99974

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=1.8e-29  Score=255.42  Aligned_cols=215  Identities=30%  Similarity=0.491  Sum_probs=170.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCC-CccccccccCCCceEEEeccccchh-----c--cCCCE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEPI-----L--LEVDQ  183 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~vD~  183 (335)
                      .++|+|||||||||||++|+++|+++  +++|+++++.... ....+.......+++++.+|+.+..     +  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            46789999999999999999999998  5789998874211 1111111112346888999998742     2  57999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCC---CCCCcCCCCCCCCCCCh
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHP---QKETYWGNVNPIGERSC  258 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~---~~E~~~~~~~~~~~~~~  258 (335)
                      |||+|+.........++..++++|+.||.+++++|++.+ + +|||+||..+||.....+   ..|+     .+..+.+.
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~~  158 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTNP  158 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCCC
Confidence            999998755444444667889999999999999999987 4 899999999998765432   2343     34556788


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|..+|.+++.+.++.+++++++||++||||+..  ...+++.++..+..++++.+++++++.++|+||+|+|+
T Consensus       159 Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~--~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~  233 (668)
T PLN02260        159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAE  233 (668)
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCC--cccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHH
Confidence            9999999999999998888999999999999999853  24578888888888889999999999999999999974

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=2.1e-29  Score=236.41  Aligned_cols=212  Identities=29%  Similarity=0.504  Sum_probs=163.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCC-CCccccccccCCCceEEEeccccch-----hcc--CCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~  187 (335)
                      |+|||||||||||++|+++|+++|++ |+++++... ..............+.++.+|+.+.     .+.  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999975 555554321 1111111111124577888999875     232  58999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---------CC-eEEEEecccccCCCCC----------CCCCCCcC
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---------GA-KFLLTSTSEVYGDPLE----------HPQKETYW  247 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~-r~v~iSS~~v~~~~~~----------~~~~E~~~  247 (335)
                      ||.........++..++++|+.|+.+++++|++.         ++ ++|++||..+|+....          .+.+|+  
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~--  158 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET--  158 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc--
Confidence            9875443334567889999999999999999874         34 8999999999986321          123454  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeec
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSF  327 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~  327 (335)
                         .+..+.+.|+.+|.++|.+++.++++++++++++|+++||||+..  ...+++.++..+..++++.+++++++.++|
T Consensus       159 ---~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (352)
T PRK10084        159 ---TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF--PEKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (352)
T ss_pred             ---CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC--ccchHHHHHHHHhcCCCeEEeCCCCeEEee
Confidence               456777899999999999999998888999999999999999852  245778888888888888888999999999


Q ss_pred             eecccccC
Q 019794          328 QYVSDLVH  335 (335)
Q Consensus       328 v~v~Dva~  335 (335)
                      +||+|+|+
T Consensus       234 v~v~D~a~  241 (352)
T PRK10084        234 LYVEDHAR  241 (352)
T ss_pred             EEHHHHHH
Confidence            99999974

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=3.5e-29  Score=233.81  Aligned_cols=216  Identities=26%  Similarity=0.313  Sum_probs=166.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-cccccc-----cCCCceEEEeccccch-----hcc--C
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHH-----FRNPRFELIRHDVVEP-----ILL--E  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~-----~~~~~~~~~~~D~~~~-----~~~--~  180 (335)
                      .++|+||||||+||||++|+++|+++|++|++++|...... ..+...     .....+.++.+|+.+.     .+.  +
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            45689999999999999999999999999999998654211 111111     0123578889999775     233  4


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC------eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA------KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~------r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +|+|||+|+.........++...+++|+.|+.+++++|++.++      +||++||.++||.... +.+|+     .+..
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~~  157 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPFH  157 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCCC
Confidence            7999999997554444456777889999999999999998774      7999999999997654 66676     5667


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-CcchHHHHHHHHHhCCCeEE-ecCCCceeeceeccc
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQAIRRQPMTV-YGDGKQTRSFQYVSD  332 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-~~~~i~~~~~~~~~~~~~~~-~g~g~~~~~~v~v~D  332 (335)
                      +.+.|+.+|.++|.+++.++.+++++++..|+.++|||+.... -...+..++..+..+.+..+ +|++++.++|+|++|
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D  237 (340)
T PLN02653        158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD  237 (340)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence            7889999999999999999988899999999999999974321 12234455566667765544 489999999999999


Q ss_pred             ccC
Q 019794          333 LVH  335 (335)
Q Consensus       333 va~  335 (335)
                      +|+
T Consensus       238 ~a~  240 (340)
T PLN02653        238 YVE  240 (340)
T ss_pred             HHH
Confidence            974

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=3.6e-30  Score=229.62  Aligned_cols=191  Identities=29%  Similarity=0.413  Sum_probs=146.6

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc---cccccCCCce----EEEeccccch-----hcc--CCCE
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN---LVHHFRNPRF----ELIRHDVVEP-----ILL--EVDQ  183 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~---~~~~~~~~~~----~~~~~D~~~~-----~~~--~vD~  183 (335)
                      ||||||+|.||+.||++|++.+. +++++++++.....-   +.......++    ..+.+|+.|.     .+.  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999986 899999976543322   2211233333    3457898776     445  7999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHH
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      |||.|+..+.+..+.++.+.+++|+.||.|++++|.+.++ +||++||..+                   .+|.+.||.|
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA-------------------v~PtnvmGat  141 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA-------------------VNPTNVMGAT  141 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC-------------------SS--SHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc-------------------CCCCcHHHHH
Confidence            9999999888888999999999999999999999999998 8999999844                   4567999999


Q ss_pred             HHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          263 KRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       263 K~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      |+.+|.++..++...   +.+++++|+|||.|.+     +++++.|.+++.+|+|+++ .+++..|.|+.++|++
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv  210 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAV  210 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHH
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHH
Confidence            999999999987755   6899999999999975     8999999999999999997 8889999999999876

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=5.8e-29  Score=229.17  Aligned_cols=206  Identities=23%  Similarity=0.348  Sum_probs=150.4

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEe---c-cccchhc-----cCCCEEEEccC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIR---H-DVVEPIL-----LEVDQIYHLAC  189 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~-D~~~~~~-----~~vD~Vih~A~  189 (335)
                      ||||||+||||++|+++|++.|++++++.|....... ....   ..+++.+   . ++....+     .++|+|||+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~   77 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---VDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA   77 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-HHhh---hhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence            8999999999999999999999977776654322111 0000   1111111   0 1111222     36999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .....  ..+....++.|+.++.+++++|++.++++|++||..+|+.....+.+|+     .+..|.+.|+.+|..+|++
T Consensus        78 ~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  150 (308)
T PRK11150         78 CSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVYGYSKFLFDEY  150 (308)
T ss_pred             ecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHHHHHHHHHHHH
Confidence            54332  2245568999999999999999998889999999999997655556665     4556678899999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCCeEEe-cCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVY-GDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~~~~~-g~g~~~~~~v~v~Dva~  335 (335)
                      ++.++.+.+++++++||+++|||+.....  ...+..+.+.+.+++...++ ++++..++|+||+|+|+
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~  219 (308)
T PRK11150        151 VRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA  219 (308)
T ss_pred             HHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHH
Confidence            99998778999999999999999864321  22344555777777665444 56778899999999974

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=1.1e-28  Score=227.31  Aligned_cols=211  Identities=34%  Similarity=0.577  Sum_probs=167.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCC-ccccccccCCCceEEEeccccch-----hccC--CCEEEEc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEP-----ILLE--VDQIYHL  187 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~Vih~  187 (335)
                      +|+|||||||||++++++|++.|  ++|++++|..... .+..........++++.+|+.++     ++.+  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  6898887643211 11111111224677888898775     3444  8999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC--CeEEEEecccccCCCCCC-CCCCCcCCCCCCCCCCChHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYGDPLEH-PQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~r~v~iSS~~v~~~~~~~-~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      |+........+++..++++|+.++.+++++|++.+  +++|++||..+|+..... +.+|.     .+..+.+.|+.+|.
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~  155 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPLAPSSPYSASKA  155 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCCCCCCchHHHHH
Confidence            98655444445677889999999999999998863  489999999999865433 45665     45566678999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++.+.+++++++||+.+|||...  ...+++.++..+..++++.++++++..++|+|++|+|+
T Consensus       156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~  224 (317)
T TIGR01181       156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQF--PEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCR  224 (317)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCC--cccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHH
Confidence            9999999998888999999999999999753  25678888888888888888899999999999999974

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=2.6e-29  Score=230.70  Aligned_cols=188  Identities=22%  Similarity=0.202  Sum_probs=153.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~  189 (335)
                      |+||||||+||||++++++|+++| +|++++|...                .+.+|+.|.     .+.  ++|+|||+|+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa   63 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA   63 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence            589999999999999999999999 7988877421                123566554     333  5899999999


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .......+.++...+++|+.++.+++++|++.++++|++||..||+.....+.+|+     ++..|.+.|+.+|..+|++
T Consensus        64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Yg~sK~~~E~~  138 (299)
T PRK09987         64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVYGETKLAGEKA  138 (299)
T ss_pred             cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHH
Confidence            86655556677888899999999999999999999999999999987766677887     5677788999999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecC--CCceeeceeccccc
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGD--GKQTRSFQYVSDLV  334 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~--g~~~~~~v~v~Dva  334 (335)
                      ++.+.    .+++++|++++|||+.    .+++..+++.+.+++++.++++  +...+.+.+++|++
T Consensus       139 ~~~~~----~~~~ilR~~~vyGp~~----~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~  197 (299)
T PRK09987        139 LQEHC----AKHLIFRTSWVYAGKG----NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTA  197 (299)
T ss_pred             HHHhC----CCEEEEecceecCCCC----CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHH
Confidence            97753    4679999999999974    4677888888888888998887  56656666666654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=2.3e-28  Score=225.10  Aligned_cols=209  Identities=37%  Similarity=0.558  Sum_probs=162.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCC-CEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEV-DQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~v-D~Vih~A~~  190 (335)
                      |+|||||||||||++|+++|+++|++|++++|.........      ..++++.+|+.+.     ...++ |+|||+|+.
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~   74 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQ   74 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEcccc
Confidence            35999999999999999999999999999999755443322      3455666665553     44556 999999987


Q ss_pred             CCCCCccC-ChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          191 ASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDP-LEHPQKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       191 ~~~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      ........ ++..++++|+.|+.+++++|++.++ ++|++||..+|+.. ...+.+|+.    .+..+.+.|+.+|..+|
T Consensus        75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Yg~sK~~~E  150 (314)
T COG0451          75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPYGVSKLAAE  150 (314)
T ss_pred             CchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHHHHHHHHHH
Confidence            65444333 3567899999999999999999776 89998887777654 333566663    24444458999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCCCCc-chHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG-RVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~-~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..++.+....+++++++||+++|||+...... .++..++..+..+.+ ....+++...++|+|++|+++
T Consensus       151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  220 (314)
T COG0451         151 QLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVAD  220 (314)
T ss_pred             HHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHH
Confidence            99999988789999999999999998654322 466667777787776 666678888899999999873

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=1.5e-28  Score=230.67  Aligned_cols=220  Identities=19%  Similarity=0.214  Sum_probs=151.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      ++|+||||||+||||++++++|+++|++|++++|+................++++.+|+.+.     .+.++|+|||+|+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   88 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA   88 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence            56699999999999999999999999999999886433221111111124688899998765     4567999999998


Q ss_pred             CCCCCC--ccCChhh-----HHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCC-----CCCCCCcCCCCC----
Q 019794          190 PASPVH--YKYNPVK-----TIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLE-----HPQKETYWGNVN----  251 (335)
Q Consensus       190 ~~~~~~--~~~~~~~-----~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~-----~~~~E~~~~~~~----  251 (335)
                      ......  ...++..     .++.|+.|+.+++++|.+.+ + +||++||..+|+....     .+.+|+.+.+.+    
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~  168 (353)
T PLN02896         89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN  168 (353)
T ss_pred             cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence            654332  2223333     45566799999999998875 5 8999999999985321     345665433221    


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCe--EEecC---CCceee
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPM--TVYGD---GKQTRS  326 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~--~~~g~---g~~~~~  326 (335)
                      +..+.+.|+.+|.++|++++.+++.++++++++||++||||++.......+..++.. ..+...  ...+.   ....++
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~d  247 (353)
T PLN02896        169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNSRMGSIA  247 (353)
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCccccccccccccccCcee
Confidence            123445899999999999999998889999999999999998643212222222221 233321  11111   112469


Q ss_pred             ceecccccC
Q 019794          327 FQYVSDLVH  335 (335)
Q Consensus       327 ~v~v~Dva~  335 (335)
                      |+||+|+|+
T Consensus       248 fi~v~Dva~  256 (353)
T PLN02896        248 LVHIEDICD  256 (353)
T ss_pred             EEeHHHHHH
Confidence            999999974

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=2.4e-28  Score=226.66  Aligned_cols=195  Identities=23%  Similarity=0.341  Sum_probs=153.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ++|+||||||+||||++++++|+++|  ++|++++|+.... ..+........+.++.+|+.+.     .+.++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            57899999999999999999999986  6899998864322 1111222234688899999875     45679999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      ||.........++...+++|+.|+.+++++|.+.++ +||++||...                   ..+.+.|+.+|.++
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-------------------~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-------------------ANPINLYGATKLAS  142 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-------------------CCCCCHHHHHHHHH
Confidence            997544334456778999999999999999999886 8999999632                   23346799999999


Q ss_pred             HHHHHHHHh---hhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCC-CeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHR---GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~---~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~-~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.++.   +.|++++++|||+||||+     +.+++.+...+..+. ++++ +++++.++|+|++|+|+
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~-----~~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSR-----GSVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVN  209 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCC-----CCcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHH
Confidence            999987653   468999999999999986     357777777777775 4665 57788999999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.7e-28  Score=226.42  Aligned_cols=216  Identities=19%  Similarity=0.243  Sum_probs=158.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc--ccc-cCCCceEEEeccccch-----hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHH-FRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~--~~~-~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .+|+||||||+||||++++++|+++|++|++++|+........  ... ....+++++.+|+.+.     .+.++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999888754322110  000 0124678888998775     4567999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCC-----CCCCCCCcCCCCCC-CCCCCh
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDPL-----EHPQKETYWGNVNP-IGERSC  258 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~~~~~-----~~~~~E~~~~~~~~-~~~~~~  258 (335)
                      +||.........++...+++|+.|+.+++++|.+. +. +||++||..+|+...     ..+.+|+.+..... ..+.+.
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99864332233456788999999999999999885 44 899999988775432     23567774432211 122468


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|..+|.+++.++++++++++++||+++|||++.+. ..++..++..+..++...  +  ...++|+||+|+|+
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~-~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~  235 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPT-LNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVAL  235 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCC-CCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHH
Confidence            999999999999999888899999999999999986432 234455666666665432  2  34579999999974

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=7.4e-29  Score=214.90  Aligned_cols=212  Identities=29%  Similarity=0.496  Sum_probs=179.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCC-CCccccccccCCCceEEEeccccchhc-------cCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEPIL-------LEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~vD~Vih  186 (335)
                      ++++||||.||||+..+..+...-  ++.+.++-..- +....+......++..++.+|+.++..       .++|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            799999999999999999999874  35555544211 112223333356789999999987632       46999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCC-CCcCCCCCCCCCCChHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQK-ETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~-E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      .|+..+...+.-++....+.|+.+|..++++++..|.  +||++||..|||+..+.... |.     ...+|.++|+++|
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpyAasK  161 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPYAASK  161 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCchHHHH
Confidence            9998777777778999999999999999999999874  79999999999998877666 66     6778889999999


Q ss_pred             HHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       264 ~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++|.+++.|-..++++++++|.++||||++.  +...++.|+.....+++.++.|+|.+.|+|+||+|+++
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~--~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e  231 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQY--PEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE  231 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCccCCCcC--hHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence            99999999999999999999999999999973  47789999999999999999999999999999999874

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=3.5e-28  Score=225.19  Aligned_cols=214  Identities=20%  Similarity=0.272  Sum_probs=153.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--cccc-cCCCceEEEeccccch-----hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHH-FRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~~-~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      ++|+|||||||||||++|+++|+++|++|++++|+.......  +... ....+++++.+|+.++     ++.++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            357999999999999999999999999999999875432111  1000 0124678899998764     4678999999


Q ss_pred             ccCCCCCCCccCCh-hhHHhhHHHHHHHHHHHHHHc-CC-eEEEEeccc--ccCCC---CCCCCCCCcCCCCC-CCCCCC
Q 019794          187 LACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSE--VYGDP---LEHPQKETYWGNVN-PIGERS  257 (335)
Q Consensus       187 ~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~--v~~~~---~~~~~~E~~~~~~~-~~~~~~  257 (335)
                      +|+....  ...++ ..++++|+.|+.+++++|++. ++ +||++||..  +|+..   ...+.+|+.+.... +....+
T Consensus        83 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~  160 (322)
T PLN02662         83 TASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL  160 (322)
T ss_pred             eCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence            9986432  22344 378899999999999999887 66 899999976  36532   22345665322111 011235


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .|+.+|..+|.+++.++++.+++++++||+++|||+..+. ......++..+..+.+.    .++..++|+||+|+|+
T Consensus       161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~  233 (322)
T PLN02662        161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT-LNTSAEAILNLINGAQT----FPNASYRWVDVRDVAN  233 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC-CCchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHH
Confidence            8999999999999999888899999999999999975322 23444555556555432    2346789999999984

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=3.9e-28  Score=225.05  Aligned_cols=216  Identities=21%  Similarity=0.318  Sum_probs=157.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc--ccccc-cCCCceEEEeccccch-----hccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD--NLVHH-FRNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~~~~-~~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ..+++|||||||||||++++++|+++|++|+++.|+......  ..... .....++++.+|+.++     .+.++|+||
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            346799999999999999999999999999999887543221  11100 0124678899998765     456799999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEeccccc--CCC---CCCCCCCCcCCCCC-CCCCCC
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVY--GDP---LEHPQKETYWGNVN-PIGERS  257 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~--~~~---~~~~~~E~~~~~~~-~~~~~~  257 (335)
                      |+|+.... ...+.....+++|+.|+.+++++|++. ++ |||++||..+|  +..   .+...+|+.|.... +..+.+
T Consensus        83 h~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  161 (322)
T PLN02986         83 HTASPVFF-TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN  161 (322)
T ss_pred             EeCCCcCC-CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence            99986432 112223457899999999999999885 55 89999998754  332   23456777665321 112457


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .|+.+|..+|.+++.+.++++++++++||++||||+..+. ..+...++..+..+.++  ++  .+.++|+||+|+|+
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~  234 (322)
T PLN02986        162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPT-LNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVAL  234 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCC-CCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHH
Confidence            8999999999999999888899999999999999986432 22333455566666543  23  45689999999974

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=1.5e-27  Score=223.78  Aligned_cols=218  Identities=28%  Similarity=0.418  Sum_probs=163.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---ccccc--CCCceEEEeccccchh-----c--cC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHF--RNPRFELIRHDVVEPI-----L--LE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~-----~--~~  180 (335)
                      .+++|+|+|||||||||++|+++|+++|++|++++|........   .....  ....+.++.+|+.++.     +  .+
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            35678999999999999999999999999999998754322111   11110  1235778889997752     2  26


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +|+|||+|+.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+.+.|
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~Y  156 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNPY  156 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCHH
Confidence            8999999986543334456788999999999999999998886 8999999999987666677787     566777899


Q ss_pred             HHHHHHHHHHHHHHHhh-hCCcEEEEEeCceeCCCCCC----CC---cchHHHHHHHHHhCC--CeEEec------CCCc
Q 019794          260 DEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMCL----DD---GRVVSNFVAQAIRRQ--PMTVYG------DGKQ  323 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~-~~i~~~ivRp~~v~Gp~~~~----~~---~~~i~~~~~~~~~~~--~~~~~g------~g~~  323 (335)
                      +.+|..+|.+++.++.. .+++++++|++++||+....    ..   ...+..++..+..++  .+.+++      +|++
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  236 (352)
T PLN02240        157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG  236 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence            99999999999988754 57999999999999975321    11   112223445555443  455555      6788


Q ss_pred             eeeceecccccC
Q 019794          324 TRSFQYVSDLVH  335 (335)
Q Consensus       324 ~~~~v~v~Dva~  335 (335)
                      .++|+|++|+|+
T Consensus       237 ~~~~i~v~D~a~  248 (352)
T PLN02240        237 VRDYIHVMDLAD  248 (352)
T ss_pred             EEeeEEHHHHHH
Confidence            999999999873

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=5e-28  Score=227.05  Aligned_cols=214  Identities=21%  Similarity=0.306  Sum_probs=150.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc----CCCceEEEeccccch-----hccCCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ..|+||||||+||||++++++|+++|++|++++|+...... .....    ...++.++.+|+.+.     .+.++|+||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-VKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-HHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            45699999999999999999999999999999986543221 11110    113577888998764     456799999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCC-CCC-CCCCcCCCCC----CCCCCC
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPL-EHP-QKETYWGNVN----PIGERS  257 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~-~~~-~~E~~~~~~~----~~~~~~  257 (335)
                      |+|+.... .........+++|+.|+.+++++|.+.+ + +|||+||..+|+... ..+ .+|+.|...+    +..+.+
T Consensus        83 H~A~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         83 HVATPMDF-ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             EeCCCCCC-CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence            99985431 1112234788999999999999999876 4 899999987775432 223 4666553321    122346


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHH--HhCCCeEEecCCCceeeceecccccC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQA--IRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~--~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .|+.+|..+|.+++.++++++++++++||+++|||++...   ....++..+  ..++... ++.. ..++|+||+|+|+
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~---~~~~~~~~~~~~~~~~~~-~~~~-~~r~~v~V~Dva~  236 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS---MPPSLITALSLITGNEAH-YSII-KQGQFVHLDDLCN  236 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC---CCccHHHHHHHhcCCccc-cCcC-CCcceeeHHHHHH
Confidence            8999999999999999988899999999999999985321   112222222  2233222 2322 3479999999974

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=1e-27  Score=220.25  Aligned_cols=196  Identities=24%  Similarity=0.320  Sum_probs=149.4

Q ss_pred             EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEccCCCC
Q 019794          120 VVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLACPAS  192 (335)
Q Consensus       120 lVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~~~~  192 (335)
                      ||||||||||++|++.|++.|++|+++.+..                   .+|+.+.     .+.  ++|+|||+|+...
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~   61 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKVG   61 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence            6999999999999999999999887664321                   2344332     222  5899999998643


Q ss_pred             CCC-ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC-hHHHHHHHHHHH
Q 019794          193 PVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS-CYDEGKRTAETL  269 (335)
Q Consensus       193 ~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~E~l  269 (335)
                      ... ...++...++.|+.++.+++++|++.++ ++|++||..+|+.....+.+|+.+.+. +..+.+ .|+.+|.++|++
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~-~~~p~~~~Y~~sK~~~e~~  140 (306)
T PLN02725         62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTG-PPEPTNEWYAIAKIAGIKM  140 (306)
T ss_pred             ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccC-CCCCCcchHHHHHHHHHHH
Confidence            222 2345677899999999999999999987 899999999999766677888754321 333333 599999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHH----HHhCCCeEE-ecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQ----AIRRQPMTV-YGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~----~~~~~~~~~-~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.+.+..+++++++||+++|||+....  ...+++.++..    ...+.++.+ +++++..++|+|++|+|+
T Consensus       141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~  213 (306)
T PLN02725        141 CQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLAD  213 (306)
T ss_pred             HHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHH
Confidence            9998888899999999999999985321  23445555543    345666655 688999999999999974

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=1e-26  Score=216.81  Aligned_cols=213  Identities=25%  Similarity=0.494  Sum_probs=156.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc--cccCCCceEEEeccccch-----hcc--CCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV--HHFRNPRFELIRHDVVEP-----ILL--EVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~  187 (335)
                      |+|+|||||||||++++++|+++|++|++++|..........  ......++.++.+|+.+.     ++.  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            589999999999999999999999999998765332221111  111223467788888765     232  59999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC-CCCChHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI-GERSCYDEGKRT  265 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~-~~~~~Y~~sK~~  265 (335)
                      |+..........+...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+. .+.+.|+.+|..
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~-----~~~~~p~~~Y~~sK~~  155 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVES-----FPTGTPQSPYGKSKLM  155 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccc-----cCCCCCCChhHHHHHH
Confidence            986543333345678899999999999999999887 8999999999987666667777     343 456899999999


Q ss_pred             HHHHHHHHHhhh-CCcEEEEEeCceeCCCCC----CC----CcchHHHHHHHHHhCC--CeEEec------CCCceeece
Q 019794          266 AETLTMDYHRGA-GVEVRIARIFNTYGPRMC----LD----DGRVVSNFVAQAIRRQ--PMTVYG------DGKQTRSFQ  328 (335)
Q Consensus       266 ~E~l~~~~a~~~-~i~~~ivRp~~v~Gp~~~----~~----~~~~i~~~~~~~~~~~--~~~~~g------~g~~~~~~v  328 (335)
                      +|++++.++++. +++++++|++++||+...    .+    ...+++ ++..+..+.  .+.+++      +|++.++|+
T Consensus       156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  234 (338)
T PRK10675        156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEEeeE
Confidence            999999987653 799999999999997421    11    122333 334444432  355554      677899999


Q ss_pred             ecccccC
Q 019794          329 YVSDLVH  335 (335)
Q Consensus       329 ~v~Dva~  335 (335)
                      |++|+|+
T Consensus       235 ~v~D~a~  241 (338)
T PRK10675        235 HVMDLAD  241 (338)
T ss_pred             EHHHHHH
Confidence            9999974

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=3.7e-27  Score=229.30  Aligned_cols=220  Identities=17%  Similarity=0.166  Sum_probs=160.1

Q ss_pred             CCCCCCCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccc--cc-cc-----c--------------CCC
Q 019794          110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDN--LV-HH-----F--------------RNP  164 (335)
Q Consensus       110 ~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~--~~-~~-----~--------------~~~  164 (335)
                      +....++|+|||||||||||++|+++|++.+.   +|+++.|........  +. ..     +              ...
T Consensus         5 i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996          5 CVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             HHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            34457889999999999999999999998754   689999975432211  00 00     0              115


Q ss_pred             ceEEEeccccch------------hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEec
Q 019794          165 RFELIRHDVVEP------------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTST  230 (335)
Q Consensus       165 ~~~~~~~D~~~~------------~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS  230 (335)
                      ++.++.+|+.++            .+.++|+|||+||...   ...++...+++|+.||.+++++|++. ++ +||++||
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST  161 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST  161 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            788999999632            3457999999998643   34578889999999999999999986 45 7999999


Q ss_pred             ccccCCCCCCCCCCCcCCCC--------------------------------------------C---CCCCCChHHHHH
Q 019794          231 SEVYGDPLEHPQKETYWGNV--------------------------------------------N---PIGERSCYDEGK  263 (335)
Q Consensus       231 ~~v~~~~~~~~~~E~~~~~~--------------------------------------------~---~~~~~~~Y~~sK  263 (335)
                      ..+||...+ ...|..+...                                            .   .....+.|+.||
T Consensus       162 ~~vyG~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK  240 (491)
T PLN02996        162 AYVCGEKSG-LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK  240 (491)
T ss_pred             eEEecCCCc-eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH
Confidence            999987432 1222111100                                            0   112346799999


Q ss_pred             HHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcc-----hHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR-----VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       264 ~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~-----~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++|++++.++  .+++++++||++|||+...+.++.     ....++..+.+|....++++|+..+||+||+|+|+
T Consensus       241 ~~aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~  315 (491)
T PLN02996        241 AMGEMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVN  315 (491)
T ss_pred             HHHHHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHH
Confidence            99999998874  389999999999999986543322     12334444556666677899999999999999974

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.95  E-value=5.1e-27  Score=213.91  Aligned_cols=189  Identities=25%  Similarity=0.339  Sum_probs=149.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccC--CCEEEEccCCCCCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE--VDQIYHLACPASPVH  195 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--vD~Vih~A~~~~~~~  195 (335)
                      +|||||||||||++++++|+++|++|++++|.               ..++.+.+.....+.+  +|+|||+||......
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   65 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG   65 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence            58999999999999999999999999999874               1122222222334443  599999998654333


Q ss_pred             ccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 019794          196 YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHR  275 (335)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~  275 (335)
                      ...++...+++|+.++.+++++|++.+.++|++||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+++.+  
T Consensus        66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~~K~~~E~~~~~~--  138 (287)
T TIGR01214        66 AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYRED-----DATNPLNVYGQSKLAGEQAIRAA--  138 (287)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCC-----CCCCCcchhhHHHHHHHHHHHHh--
Confidence            33456778999999999999999988889999999999987666677777     44566789999999999998764  


Q ss_pred             hhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          276 GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       276 ~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                        +.+++++||+++||++.   ...++..++..+.+++++...++  .+++++|++|+|+
T Consensus       139 --~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~  191 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGGG---GRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLAR  191 (287)
T ss_pred             --CCCeEEEEeeecccCCC---CCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHH
Confidence              67999999999999973   24566677777777777776654  6789999999874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.95  E-value=4.7e-27  Score=221.56  Aligned_cols=216  Identities=18%  Similarity=0.227  Sum_probs=154.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-------CCCceEEEeccccch-----hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-------RNPRFELIRHDVVEP-----ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~-----~~~  179 (335)
                      ...++|+||||||+||||++++++|+++|++|++++|+..... .+....       ....+.++.+|+.+.     .+.
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3467889999999999999999999999999999887643211 111100       012577888999775     466


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecc--cccCCC--CC--CCCCCCcCCCC-
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTS--EVYGDP--LE--HPQKETYWGNV-  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~--~v~~~~--~~--~~~~E~~~~~~-  250 (335)
                      ++|.|||+|+..........+....++|+.++.+++++|++. ++ |||++||.  .+|+..  ..  ...+|+.|... 
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            799999999865433322222456689999999999999886 56 89999995  477642  22  34667655432 


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceec
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYV  330 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v  330 (335)
                      .+..+.+.|+.+|..+|.+++.++++.+++++++||++||||+......    ..+..+..+. +.+++++.  ++|+||
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~----~~~~~~~~g~-~~~~g~g~--~~~v~V  280 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS----TATIAYLKGA-QEMLADGL--LATADV  280 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC----hhHHHHhcCC-CccCCCCC--cCeEEH
Confidence            2344567899999999999999988889999999999999997532111    1122334443 45556654  479999


Q ss_pred             ccccC
Q 019794          331 SDLVH  335 (335)
Q Consensus       331 ~Dva~  335 (335)
                      +|+|+
T Consensus       281 ~Dva~  285 (367)
T PLN02686        281 ERLAE  285 (367)
T ss_pred             HHHHH
Confidence            99974

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.95  E-value=3.6e-26  Score=210.76  Aligned_cols=204  Identities=25%  Similarity=0.384  Sum_probs=151.5

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccch-----h----ccCCCEEEEcc
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I----LLEVDQIYHLA  188 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~----~~~vD~Vih~A  188 (335)
                      |||||||||||++++++|+++|+ +|++++|.....  .....    ....+..|+.++     .    +.++|+|||+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            69999999999999999999998 788887754321  11111    112233444332     1    24799999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      +...  ....++...+++|+.++.+++++|++.+++||++||..+|+.... +..|+.    .+..+.+.|+.+|..+|.
T Consensus        75 ~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~----~~~~p~~~Y~~sK~~~e~  147 (314)
T TIGR02197        75 ACSD--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGR----ELERPLNVYGYSKFLFDQ  147 (314)
T ss_pred             cccC--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-Cccccc----CcCCCCCHHHHHHHHHHH
Confidence            8643  233467788999999999999999998889999999999987543 344442    223467889999999999


Q ss_pred             HHHHHHhh--hCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCCeEEe------cCCCceeeceecccccC
Q 019794          269 LTMDYHRG--AGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVY------GDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~--~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~~~~~------g~g~~~~~~v~v~Dva~  335 (335)
                      +++++...  .+++++++||+++|||+.....  ..++..++..+..++++.++      ++|++.++|+|++|+|+
T Consensus       148 ~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~  224 (314)
T TIGR02197       148 YVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVD  224 (314)
T ss_pred             HHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHH
Confidence            99875432  3679999999999999854321  34667778888888877664      46778899999999874

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.94  E-value=4.2e-26  Score=209.18  Aligned_cols=212  Identities=25%  Similarity=0.381  Sum_probs=168.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCc-cccccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      ++.+++||||+||+|++|+.+|++++  .+|++++..+.... ......+....+.++.+|+.+.     ++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            45689999999999999999999998  58999887654211 1111111367888999998775     56778 7888


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-CCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      +|+...+.....+....+++|+.||.+++++|++.++ ++||+||..|+..... ...+|+..   .|......|+.||+
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p---~p~~~~d~Y~~sKa  158 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP---YPLKHIDPYGESKA  158 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC---CccccccccchHHH
Confidence            8775555555556889999999999999999999998 8999999998866555 34444421   23344468999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      .+|+++++.+...++..+++||..||||++    ..+++.++..+..++.+...++++.+-+|+|++.++
T Consensus       159 ~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd----~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva  224 (361)
T KOG1430|consen  159 LAEKLVLEANGSDDLYTCALRPPGIYGPGD----KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVA  224 (361)
T ss_pred             HHHHHHHHhcCCCCeeEEEEccccccCCCC----ccccHHHHHHHHccCceEEeeccccccceEEechhH
Confidence            999999997655679999999999999984    778888999999999988889998889999998765

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.94  E-value=1.7e-26  Score=210.39  Aligned_cols=184  Identities=28%  Similarity=0.413  Sum_probs=141.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc--cCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL--LEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~--~~vD~Vih~A~  189 (335)
                      ||||||||+|+||++|.+.|.++|++|+.+.|.                    ..|+.+.     .+  .++|+|||+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa   60 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA   60 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence            699999999999999999999999999998664                    3333332     22  25899999999


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ...+...+.++...+++|+.++.+++++|.+.+.++||+||..||+.....+..|+     ++..|.+.||.+|..+|+.
T Consensus        61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~-----d~~~P~~~YG~~K~~~E~~  135 (286)
T PF04321_consen   61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTED-----DPPNPLNVYGRSKLEGEQA  135 (286)
T ss_dssp             ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TT-----S----SSHHHHHHHHHHHH
T ss_pred             eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccC-----CCCCCCCHHHHHHHHHHHH
Confidence            87666677789999999999999999999999999999999999988777778888     5677889999999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++..    .-+..|+|++.+||+.    ..+++..++..+.+++.+.++.+  .+++.+|++|+|+
T Consensus       136 v~~~----~~~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~  191 (286)
T PF04321_consen  136 VRAA----CPNALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLAR  191 (286)
T ss_dssp             HHHH-----SSEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEESS--CEE--EEHHHHHH
T ss_pred             HHHh----cCCEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHH
Confidence            9873    2389999999999994    36788888899988888887654  7889999999974

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=1.6e-25  Score=207.19  Aligned_cols=213  Identities=31%  Similarity=0.536  Sum_probs=158.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c--cCCCEEEEccCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L--LEVDQIYHLACP  190 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~vD~Vih~A~~  190 (335)
                      +||||||||+||++++++|+++|++|+++++.................++++.+|+.++.     +  .++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643322221111111125677888887652     2  369999999987


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ........++...++.|+.++.+++++|.+.++ ++|++||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CCCCCCCchHHHHHHHHHH
Confidence            544444446677889999999999999999886 8999999999987665566777     4555678899999999999


Q ss_pred             HHHHHhh-hCCcEEEEEeCceeCCCCCCC-------CcchHHHHHHHHH-hCCCeEEec------CCCceeeceeccccc
Q 019794          270 TMDYHRG-AGVEVRIARIFNTYGPRMCLD-------DGRVVSNFVAQAI-RRQPMTVYG------DGKQTRSFQYVSDLV  334 (335)
Q Consensus       270 ~~~~a~~-~~i~~~ivRp~~v~Gp~~~~~-------~~~~i~~~~~~~~-~~~~~~~~g------~g~~~~~~v~v~Dva  334 (335)
                      ++.++.+ .+++++++||+++||+.....       ...+++.+..... ...++.+++      +++..++|||++|+|
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            9998877 799999999999999864211       1234555554443 234454433      566789999999997


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       236 ~  236 (328)
T TIGR01179       236 D  236 (328)
T ss_pred             H
Confidence            4

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.94  E-value=8.4e-27  Score=208.48  Aligned_cols=212  Identities=25%  Similarity=0.300  Sum_probs=125.8

Q ss_pred             EEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCc--ccc----c-----ccc---CCCceEEEeccccchhc------
Q 019794          121 VTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRK--DNL----V-----HHF---RNPRFELIRHDVVEPIL------  178 (335)
Q Consensus       121 VTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~--~~~----~-----~~~---~~~~~~~~~~D~~~~~~------  178 (335)
                      |||||||||++|+++|++.+.  +|+|+.|..+...  +.+    .     ...   ...++.++.+|+.++.+      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  9999999764311  111    1     011   25789999999988632      


Q ss_pred             -----cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCC----CCcCC
Q 019794          179 -----LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQK----ETYWG  248 (335)
Q Consensus       179 -----~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~----E~~~~  248 (335)
                           .++|+||||||.   ..+..+....+++|+.||.++++.|.+.+. +|+|+||+.+.+.......+    +....
T Consensus        81 ~~~L~~~v~~IiH~Aa~---v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~  157 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAAS---VNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDD  157 (249)
T ss_dssp             HHHHHHH--EEEE--SS----SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--E
T ss_pred             hhccccccceeeecchh---hhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCccccccccccccc
Confidence                 469999999964   445557777899999999999999996554 89999996555443322100    11111


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCC--CCCcchHHHHHHHHHhCCCe-EEecCCCcee
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC--LDDGRVVSNFVAQAIRRQPM-TVYGDGKQTR  325 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~--~~~~~~i~~~~~~~~~~~~~-~~~g~g~~~~  325 (335)
                      ........++|..||+.+|++++.++++.|++++|+|||.|+|....  .........++......+.+ ...++++...
T Consensus       158 ~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  237 (249)
T PF07993_consen  158 LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARL  237 (249)
T ss_dssp             EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT-
T ss_pred             chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceE
Confidence            11223445799999999999999998888999999999999994321  11233344444444443333 3456666679


Q ss_pred             eceecccccC
Q 019794          326 SFQYVSDLVH  335 (335)
Q Consensus       326 ~~v~v~Dva~  335 (335)
                      ++++||.+|+
T Consensus       238 d~vPVD~va~  247 (249)
T PF07993_consen  238 DLVPVDYVAR  247 (249)
T ss_dssp             -EEEHHHHHH
T ss_pred             eEECHHHHHh
Confidence            9999998874

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=9e-26  Score=207.01  Aligned_cols=207  Identities=17%  Similarity=0.156  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc--cccccc-CCCceEEEeccccch-----hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD--NLVHHF-RNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .+++|+|||||||||++++++|+++|++|++++|+......  .+.... ...++.++.+|+++.     .+.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            45689999999999999999999999999999985322110  011110 123578888998765     5678999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccccCC--C---CCCCCCCCcCCCCCC-CCCCCh
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGD--P---LEHPQKETYWGNVNP-IGERSC  258 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~~~--~---~~~~~~E~~~~~~~~-~~~~~~  258 (335)
                      .++....  ....+..++++|+.|+.+++++|.+. ++ |+|++||..++..  .   ...+.+|+.|..... ......
T Consensus        85 ~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  162 (297)
T PLN02583         85 CFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW  162 (297)
T ss_pred             eCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence            8764321  22346788999999999999999886 44 8999999876431  1   233567776643221 112247


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|..+|++++.++++.+++++++||++||||+....    ..     ...+. ...+.+  ..++||||+|+|+
T Consensus       163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~----~~-----~~~~~-~~~~~~--~~~~~v~V~Dva~  227 (297)
T PLN02583        163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH----NP-----YLKGA-AQMYEN--GVLVTVDVNFLVD  227 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc----hh-----hhcCC-cccCcc--cCcceEEHHHHHH
Confidence            999999999999999887899999999999999975221    11     12222 222233  2457999999984

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=1.2e-25  Score=199.44  Aligned_cols=188  Identities=25%  Similarity=0.304  Sum_probs=162.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACPASPV  194 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~~~~~  194 (335)
                      |+|||||++|.+|++|++.|. .+.+|+.+++.               .+++.+.|...+.+.  .+|+|||+|++....
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------------~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRA---------------ELDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc---------------cccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            459999999999999999998 66899999763               244555554444444  589999999998888


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH  274 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a  274 (335)
                      ..+.+++..+.+|..|+.|++++|.+.|.++||+||..||....+.+..|+     ++.+|.+.||.||.+.|..++.+ 
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvYG~sKl~GE~~v~~~-  138 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVYGRSKLAGEEAVRAA-  138 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhhhHHHHHHHHHHHHh-
Confidence            888889999999999999999999999999999999999988888888888     67788899999999999999774 


Q ss_pred             hhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          275 RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       275 ~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                         +-+..|+|.+++||..    .++++..+++...+++++.++.|  ++.+.+++.|+|+
T Consensus       139 ---~~~~~I~Rtswv~g~~----g~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~  190 (281)
T COG1091         139 ---GPRHLILRTSWVYGEY----GNNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLAD  190 (281)
T ss_pred             ---CCCEEEEEeeeeecCC----CCCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHH
Confidence               5689999999999986    37788899999999999998665  8888999999874

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=1.1e-25  Score=199.53  Aligned_cols=213  Identities=28%  Similarity=0.429  Sum_probs=172.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----cCCCceEEEeccccchhc-------cCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEPIL-------LEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~-------~~vD~V  184 (335)
                      +++||||||+||||+|.+-+|+++|+.|+++|+........+...    .....+.++++|+.|..+       .+.|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            468999999999999999999999999999999766554433211    124679999999988732       359999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC-CCChHHHH
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG-ERSCYDEG  262 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~-~~~~Y~~s  262 (335)
                      +|.|+........+++..++..|+.||.++++.+++.++ .+||.||+.+||.+...|+.|+     .+.. |.+.|+.+
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~-----~~t~~p~~pyg~t  156 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEE-----DPTDQPTNPYGKT  156 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCc-----CCCCCCCCcchhh
Confidence            999998888888889999999999999999999999998 7999999999999999999999     4555 88999999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeC--CCCC----C--CCcchHHHHHHHHHh---------CCCeEEecCCCcee
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYG--PRMC----L--DDGRVVSNFVAQAIR---------RQPMTVYGDGKQTR  325 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~G--p~~~----~--~~~~~i~~~~~~~~~---------~~~~~~~g~g~~~~  325 (335)
                      |..+|..+..+....+..++.+|.++++|  |...    +  .++++.+ .+.++.-         +.+.+. .+|+..+
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t-~dgt~vr  234 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTT-IDGTIVR  234 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccc-cCCCeee
Confidence            99999999999988899999999999999  3211    1  1233444 3333322         233332 3668899


Q ss_pred             eceecccccC
Q 019794          326 SFQYVSDLVH  335 (335)
Q Consensus       326 ~~v~v~Dva~  335 (335)
                      +++|+-|+|+
T Consensus       235 dyi~v~Dla~  244 (343)
T KOG1371|consen  235 DYIHVLDLAD  244 (343)
T ss_pred             cceeeEehHH
Confidence            9999999874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.93  E-value=6.2e-25  Score=203.57  Aligned_cols=205  Identities=24%  Similarity=0.350  Sum_probs=151.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|+||||+||||+++++.|+++|++|++++|+......     .....++++.+|+.+.     .+.++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            489999999999999999999999999999996543211     1223577888888764     466899999999743


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCC-CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~-~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .  ....++...+++|+.++.+++++|++.++ ++|++||..+|+. ....+.+|+..  ..+....+.|+.+|.++|++
T Consensus        76 ~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~--~~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        76 R--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTP--SSLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             c--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCC--CCcccccChHHHHHHHHHHH
Confidence            2  23446788899999999999999999886 8999999999985 33445666521  12222346799999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.++.+.+++++++||+++||++...  ......++.....++. ..+.+  ...+|+|++|+|+
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~--~~~~~~~~~~~~~~~~-~~~~~--~~~~~i~v~D~a~  212 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTPIGPRDIK--PTPTGRIIVDFLNGKM-PAYVD--TGLNLVHVDDVAE  212 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCccCCCCCCC--CCcHHHHHHHHHcCCC-ceeeC--CCcceEEHHHHHH
Confidence            999988789999999999999997521  1112233333333332 22222  2358999999974

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=4.8e-24  Score=195.53  Aligned_cols=186  Identities=18%  Similarity=0.250  Sum_probs=134.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      ...|+||||||+||||++|+++|+++|++|+....+..             ..+.+..|+.+   .++|+|||+||....
T Consensus         7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~-------------~~~~v~~~l~~---~~~D~ViH~Aa~~~~   70 (298)
T PLN02778          7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLE-------------NRASLEADIDA---VKPTHVFNAAGVTGR   70 (298)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccC-------------CHHHHHHHHHh---cCCCEEEECCcccCC
Confidence            34579999999999999999999999999875422110             00111122211   368999999997653


Q ss_pred             CC---ccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCC------CCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          194 VH---YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE------HPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       194 ~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~------~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      ..   ...++...+++|+.|+.+++++|++.+++++++||.++|+....      .+..|++    .+..+.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHHH
Confidence            32   34578889999999999999999999988888888888865321      2345542    23344578999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ++|.+++.++     +..++|+..++|++.     .....|+..+..++++...+     .+|+|++|++
T Consensus       147 ~~E~~~~~y~-----~~~~lr~~~~~~~~~-----~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v  201 (298)
T PLN02778        147 MVEELLKNYE-----NVCTLRVRMPISSDL-----SNPRNFITKITRYEKVVNIP-----NSMTILDELL  201 (298)
T ss_pred             HHHHHHHHhh-----ccEEeeecccCCccc-----ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHH
Confidence            9999998865     356888887777642     12345778888887765543     2799999986

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.92  E-value=6e-24  Score=192.88  Aligned_cols=211  Identities=23%  Similarity=0.242  Sum_probs=152.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc------cc-----cccccCCCceEEEeccccchh-------
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------DN-----LVHHFRNPRFELIRHDVVEPI-------  177 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~------~~-----~~~~~~~~~~~~~~~D~~~~~-------  177 (335)
                      ++||+||||||+|.+|+.+|+.+-. +|+|++|..+...      ..     .+......+++++.+|+.++.       
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            4799999999999999999999865 9999999755211      11     112234578999999997652       


Q ss_pred             ----ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCe-EEEEecccccCCCCCCCCCCCc----CC
Q 019794          178 ----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPLEHPQKETY----WG  248 (335)
Q Consensus       178 ----~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-~v~iSS~~v~~~~~~~~~~E~~----~~  248 (335)
                          ...+|.|||+|+.   .++...+.+....||.||..++++|...+.| ++|+||++++........+++.    ..
T Consensus        81 ~~~La~~vD~I~H~gA~---Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAAL---VNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchh---hcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence                3459999999964   4455678888999999999999999888775 9999999998764433332221    11


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCC--CCCcchHHHHHHHHHhCCCeEEecCCCceee
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC--LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRS  326 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~--~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~  326 (335)
                      ........++|+.||+.+|.++++.... |++++|+|||+|-|....  .....++..|+..+.+-+.++   +.....+
T Consensus       158 ~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~  233 (382)
T COG3320         158 RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLD  233 (382)
T ss_pred             ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---Ccccchh
Confidence            1122345589999999999999997765 999999999999998752  223446667777776654433   2234445


Q ss_pred             ceeccccc
Q 019794          327 FQYVSDLV  334 (335)
Q Consensus       327 ~v~v~Dva  334 (335)
                      .+.+++++
T Consensus       234 ~~p~~~v~  241 (382)
T COG3320         234 MLPVDHVA  241 (382)
T ss_pred             hCccceee
Confidence            55555443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.91  E-value=1.6e-23  Score=190.88  Aligned_cols=200  Identities=19%  Similarity=0.206  Sum_probs=137.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCC-c-
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH-Y-  196 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~-~-  196 (335)
                      ||||||+||||++++++|+++|++|++++|+..........     .+.....+.....+.++|+|||+||...... . 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~   75 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-----GYKPWAPLAESEALEGADAVINLAGEPIADKRWT   75 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-----eeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence            69999999999999999999999999999976543221111     1111222333456778999999998543211 1 


Q ss_pred             cCChhhHHhhHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019794          197 KYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY  273 (335)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~~a~~~~~---r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~  273 (335)
                      ...+..++++|+.++.+++++|++.++   .+|++||..+|+.....+.+|+.     +..+.+.|+..+...|..+..+
T Consensus        76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~-----~~~~~~~~~~~~~~~e~~~~~~  150 (292)
T TIGR01777        76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED-----SPAGDDFLAELCRDWEEAAQAA  150 (292)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc-----CCCCCChHHHHHHHHHHHhhhc
Confidence            123456889999999999999999875   35556667789876556666762     2333445666676667766543


Q ss_pred             HhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          274 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       274 a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                       .+.+++++++||+++|||+.     +....+.......... .+++++..++|+|++|+|+
T Consensus       151 -~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~~~~~~-~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       151 -EDLGTRVVLLRTGIVLGPKG-----GALAKMLPPFRLGLGG-PLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             -hhcCCceEEEeeeeEECCCc-----chhHHHHHHHhcCccc-ccCCCCcccccEeHHHHHH
Confidence             34589999999999999963     2333333322222111 2478889999999999974

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=99.91  E-value=1.5e-23  Score=198.56  Aligned_cols=190  Identities=21%  Similarity=0.319  Sum_probs=145.0

Q ss_pred             CCCCeEEEE----cCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc------cccCCCceEEEeccccc--hhc--c
Q 019794          114 RRRLRIVVT----GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV------HHFRNPRFELIRHDVVE--PIL--L  179 (335)
Q Consensus       114 ~~~~~vlVT----GatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~~~D~~~--~~~--~  179 (335)
                      .++++||||    |||||||++|+++|+++|++|++++|+.........      ..+....++++.+|+.+  ..+  .
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~  129 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA  129 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence            345789999    999999999999999999999999997643211000      01112347888888866  222  4


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      ++|+|||+++.                +..++.+++++|++.|+ +||++||..+|+.....+..|.     .+..+.. 
T Consensus       130 ~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~-----~~~~p~~-  187 (378)
T PLN00016        130 GFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG-----DAVKPKA-  187 (378)
T ss_pred             CccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC-----CcCCCcc-
Confidence            69999998752                24578899999999998 8999999999987655556665     2333222 


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                         +|..+|.+++.    .+++++++||+++||++..   ..+...++..+..++++.+++++++.++|+|++|+|+
T Consensus       188 ---sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~---~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~  254 (378)
T PLN00016        188 ---GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNN---KDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLAS  254 (378)
T ss_pred             ---hHHHHHHHHHH----cCCCeEEEeceeEECCCCC---CchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHH
Confidence               79999987753    5899999999999999742   3455667778888888888889999999999999974

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.91  E-value=3.3e-23  Score=194.50  Aligned_cols=211  Identities=23%  Similarity=0.284  Sum_probs=147.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCc--ccccc---------c-cCCCceEEEeccccch-------
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRK--DNLVH---------H-FRNPRFELIRHDVVEP-------  176 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~--~~~~~---------~-~~~~~~~~~~~D~~~~-------  176 (335)
                      +|+|||||||||++|+++|+++|  .+|++++|......  +.+..         . ....+++++.+|+.++       
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999754211  00000         0 0014788899997654       


Q ss_pred             ----hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          177 ----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       177 ----~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                          ...++|+|||+|+...   ....+...+++|+.|+.+++++|.+.+. +|+++||..+|+........|+......
T Consensus        81 ~~~~~~~~~d~vih~a~~~~---~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN---WVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec---cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence                2356999999998543   2345667888999999999999999887 6999999999976433332333211111


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC--CCcchHHHHHHHHHhCCCeEEecCCC-ceeece
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL--DDGRVVSNFVAQAIRRQPMTVYGDGK-QTRSFQ  328 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~--~~~~~i~~~~~~~~~~~~~~~~g~g~-~~~~~v  328 (335)
                      .....+.|+.+|+.+|.+++.+... |++++++|||.+||+....  ....++..++......+.+   .+.. ..++|+
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~  233 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELTEDLT  233 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccccCcc
Confidence            2233468999999999999887654 9999999999999974321  1223444455554443322   2333 357899


Q ss_pred             ecccccC
Q 019794          329 YVSDLVH  335 (335)
Q Consensus       329 ~v~Dva~  335 (335)
                      |++|+|+
T Consensus       234 ~vddva~  240 (367)
T TIGR01746       234 PVDYVAR  240 (367)
T ss_pred             cHHHHHH
Confidence            9999873

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.7e-23  Score=208.61  Aligned_cols=210  Identities=25%  Similarity=0.279  Sum_probs=147.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHH--hCCCeEEEEecCCCCCc-cccccccCCCceEEEeccccchh----------ccCCCE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLI--DRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEPI----------LLEVDQ  183 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll--~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~----------~~~vD~  183 (335)
                      |+|||||||||||++|+++|+  +.|++|++++|...... ..+.......+++++.+|+.++.          +.++|+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D~   80 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDIDH   80 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCCCE
Confidence            589999999999999999999  57899999999542211 11111112246888999987731          268999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHH
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      |||+||....   ...+....++|+.|+.+++++|++.++ +||++||..+|+.... ..+|+.+.  .+..+.+.|+.+
T Consensus        81 Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~--~~~~~~~~Y~~s  154 (657)
T PRK07201         81 VVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFD--EGQGLPTPYHRT  154 (657)
T ss_pred             EEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccch--hhcCCCCchHHH
Confidence            9999985432   235567889999999999999999876 8999999999986533 33444322  122334679999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCc-----chHHHHHHHHHhC-CCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG-----RVVSNFVAQAIRR-QPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~-----~~i~~~~~~~~~~-~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|+++++   ..+++++++||++|||+.......     .++..++..+... ..+...+.+...++++|++|+|+
T Consensus       155 K~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~  230 (657)
T PRK07201        155 KFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVAD  230 (657)
T ss_pred             HHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHH
Confidence            9999999875   358999999999999986422111     1122233333211 22344456667789999999873

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.89  E-value=1.2e-22  Score=192.83  Aligned_cols=188  Identities=21%  Similarity=0.280  Sum_probs=142.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--cccc-cCCCceEEEeccccch-----hcc----C
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHH-FRNPRFELIRHDVVEP-----ILL----E  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~~-~~~~~~~~~~~D~~~~-----~~~----~  180 (335)
                      ..++++|+|||||||||++++++|+++|++|++++|+.......  .... .....++++.+|+.++     .+.    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            35678999999999999999999999999999999976432210  0000 1124678899999775     233    5


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +|+||||++....     .....+++|+.++.+++++|++.++ +||++||..++.                   +...|
T Consensus       137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~-------------------p~~~~  192 (390)
T PLN02657        137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK-------------------PLLEF  192 (390)
T ss_pred             CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC-------------------cchHH
Confidence            9999999874221     1234567899999999999999987 799999987652                   12458


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCcee-eceecccccC
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTR-SFQYVSDLVH  335 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~-~~v~v~Dva~  335 (335)
                      ..+|...|..++.  ...+++++++||+.+||+.         ..++..+.+++++.++|+|+..+ ++||++|+|+
T Consensus       193 ~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        193 QRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL---------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             HHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc---------HHHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence            8999999998765  3468999999999999853         23456667788888889988755 6799999863

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.89  E-value=2.2e-22  Score=186.20  Aligned_cols=178  Identities=17%  Similarity=0.224  Sum_probs=132.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|+|||||||||++++++|+++|++|++++|+.....     ......++++.+|+.++     ++.++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-----FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-----hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            58999999999999999999999999999999743211     11123678899998765     578899999987531


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                           ..++..++++|+.++.+++++|++.++ |||++||..+..                  .+...|..+|..+|.++
T Consensus        76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~------------------~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ------------------YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc------------------cCCChHHHHHHHHHHHH
Confidence                 124456778999999999999999998 899999854321                  01245889999999887


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.    .+++++++||+.+|+..        +..+...+..+.++.+ ..++..++|+|++|+|+
T Consensus       133 ~~----~~l~~tilRp~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~  184 (317)
T CHL00194        133 KK----SGIPYTIFRLAGFFQGL--------ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAK  184 (317)
T ss_pred             HH----cCCCeEEEeecHHhhhh--------hhhhhhhhccCCceEe-cCCCCccCccCHHHHHH
Confidence            53    58999999999887632        1222222334455444 55567789999999974

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=3.8e-22  Score=196.17  Aligned_cols=221  Identities=17%  Similarity=0.142  Sum_probs=153.0

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCc--cccc-c------------c-------cC
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRK--DNLV-H------------H-------FR  162 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~--~~~~-~------------~-------~~  162 (335)
                      +.+....++|+|||||||||||++|+++|++.+.   +|+++.|......  +.+. +            .       +.
T Consensus       111 ~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~  190 (605)
T PLN02503        111 IGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFM  190 (605)
T ss_pred             cchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccc
Confidence            3345567899999999999999999999998764   6899999654321  1110 0            0       01


Q ss_pred             CCceEEEeccccchh-----------ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEe
Q 019794          163 NPRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTS  229 (335)
Q Consensus       163 ~~~~~~~~~D~~~~~-----------~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iS  229 (335)
                      ..++..+.+|+.++.           ..++|+|||+|+...   +..++...+++|+.|+.+++++|++.+ . +||++|
T Consensus       191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vS  267 (605)
T PLN02503        191 LSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVS  267 (605)
T ss_pred             cccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEcc
Confidence            346888999998752           246999999997543   446788899999999999999998875 3 799999


Q ss_pred             cccccCCCCCCCCCCCcCCC--------------------CC--------------C--------------------CCC
Q 019794          230 TSEVYGDPLEHPQKETYWGN--------------------VN--------------P--------------------IGE  255 (335)
Q Consensus       230 S~~v~~~~~~~~~~E~~~~~--------------------~~--------------~--------------------~~~  255 (335)
                      |+.+||...+ .+.|.....                    .+              +                    ..-
T Consensus       268 TayVyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~  346 (605)
T PLN02503        268 TAYVNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGW  346 (605)
T ss_pred             CceeecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCC
Confidence            9999987642 223322210                    00              0                    111


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC------cchHHHHHHHHHhCCCeEEecCCCceeecee
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD------GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQY  329 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~------~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~  329 (335)
                      .+.|..+|+.+|+++++..  .+++++|+||+.|.+.-..+.+      ....+.+ .....|.-..++++++...|+|+
T Consensus       347 pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~-~~~g~G~lr~~~~~~~~~~DiVP  423 (605)
T PLN02503        347 QDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIV-LYYGKGQLTGFLADPNGVLDVVP  423 (605)
T ss_pred             CChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhh-hheeccceeEEEeCCCeeEeEEe
Confidence            3789999999999998754  4899999999999442111111      1111222 12223433346789999999999


Q ss_pred             cccccC
Q 019794          330 VSDLVH  335 (335)
Q Consensus       330 v~Dva~  335 (335)
                      ||.+|+
T Consensus       424 VD~vvn  429 (605)
T PLN02503        424 ADMVVN  429 (605)
T ss_pred             ecHHHH
Confidence            998863

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=4.1e-22  Score=167.65  Aligned_cols=205  Identities=23%  Similarity=0.343  Sum_probs=163.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--e-EEEEecCCCCCccccccccCCCceEEEeccccchhc--cCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD--E-VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--LEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~vD~Vih~A~~  190 (335)
                      +++|||||++|.+|++|.+.+.+.|.  + .+....               ..+++.....+...+  .++..|||+|+.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCCceeeehHhh
Confidence            47999999999999999999998875  2 222211               112222222222222  468999999986


Q ss_pred             CCCCC-ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          191 ASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       191 ~~~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      .+... ....+..+++.|+.-.-|++..|-+.|+ ++++..|.++|.+....|++|+.-.+.+|-+...+|+..|+++.-
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            55433 2335678999999999999999999998 899999999999999999999977766666667789999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHH----hCC-CeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAI----RRQ-PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~----~~~-~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .-+.|+.++|.+++.+-|.++|||..++.  .+.+++.++..+-    +|. .+++||.|...|.|+|++|+|+
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~  219 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLAD  219 (315)
T ss_pred             HHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHH
Confidence            99999999999999999999999987655  4668888887654    243 6899999999999999999984

>PRK05717 oxidoreductase; Validated

Probab=99.86  E-value=1.9e-20  Score=167.71  Aligned_cols=165  Identities=15%  Similarity=0.085  Sum_probs=125.2

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------c
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~  178 (335)
                      .+.+++|+++||||+|+||++++++|+++|++|++++|+.....+.. ... ...+.++.+|+.+..            +
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-KAL-GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HHc-CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            55678899999999999999999999999999999988643222211 111 235778899987751            2


Q ss_pred             cCCCEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|+||||||......      ..+++...+++|+.++.++++++.+    .+.++|++||...+.             
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~-------------  149 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ-------------  149 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC-------------
Confidence            35899999999653221      1234678999999999999999864    234899999875542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|.+.+.+++.++.+.  ++++++++||.+.++.
T Consensus       150 ---~~~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        150 ---SEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence               11223579999999999999998875  5999999999998864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-20  Score=169.54  Aligned_cols=164  Identities=17%  Similarity=0.017  Sum_probs=121.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++++|||||+|+||++++++|+++|++|++++|++....+...... ....+.++.+|+.+..            ...
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999997643322211110 1235677889987652            235


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHH----HHHHHHHH-HHcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMG----TLNMLGLA-KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~g----t~~ll~~a-~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+.+...+++|+.+    +.++++++ ++.+. ++|++||...+.               
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~---------------  149 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE---------------  149 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC---------------
Confidence            8999999997543222    23456788899999    55566666 55554 899999965431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|...+.+++.++.+   .+++++++|||.++++.
T Consensus       150 -~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~  194 (262)
T PRK13394        150 -ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL  194 (262)
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence             2233467999999999999998876   48999999999999985

>PRK06194 hypothetical protein; Provisional

Probab=99.85  E-value=1.3e-20  Score=171.75  Aligned_cols=192  Identities=14%  Similarity=0.046  Sum_probs=134.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++||||||+|+||++++++|+++|++|++++|+.....+...... ...++.++.+|+.+..            ...
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356799999999999999999999999999999986543222211111 1235778899997751            235


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcC-------CeEEEEecccccCCCCCCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-------AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-------~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++    .+.+       .++|++||...+.          
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------  153 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL----------  153 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----------
Confidence            8999999997654322    2345678999999999987774    3322       3799999976653          


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGD  320 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~  320 (335)
                            +......|+.+|++.+.+++.++.+.     +++++.+.||.+..+-             .....+++..++++
T Consensus       154 ------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~-------------~~~~~~~~~~~~~~  214 (287)
T PRK06194        154 ------APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI-------------WQSERNRPADLANT  214 (287)
T ss_pred             ------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc-------------ccccccCchhcccC
Confidence                  22334679999999999999988765     3667777776664331             12223345555677


Q ss_pred             CCceeeceeccccc
Q 019794          321 GKQTRSFQYVSDLV  334 (335)
Q Consensus       321 g~~~~~~v~v~Dva  334 (335)
                      +...++|+|++|++
T Consensus       215 ~~~~~~~~~~~~~~  228 (287)
T PRK06194        215 APPTRSQLIAQAMS  228 (287)
T ss_pred             ccccchhhHHHHHH
Confidence            77777887777653

>PRK05865 hypothetical protein; Provisional

Probab=99.84  E-value=3.6e-20  Score=187.82  Aligned_cols=159  Identities=23%  Similarity=0.356  Sum_probs=122.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|+||||+||||++++++|+++|++|++++|.....   .     ...+.++.+|+.+.     .+.++|+|||+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----PSSADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            5899999999999999999999999999999863211   1     12467788888764     457899999999753


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      ..         .+++|+.++.+++++|++.++ +||++||..                              |..+|+++
T Consensus        73 ~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~ll  113 (854)
T PRK05865         73 GR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQML  113 (854)
T ss_pred             cc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHHH
Confidence            21         468999999999999999887 899999841                              78888877


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..    ++++++++||+++|||+.        ..++..+.. .++...++++..++|+|++|+|+
T Consensus       114 ~~----~gl~~vILRp~~VYGP~~--------~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~  165 (854)
T PRK05865        114 AD----CGLEWVAVRCALIFGRNV--------DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQR  165 (854)
T ss_pred             HH----cCCCEEEEEeceEeCCCh--------HHHHHHHhc-CceeccCCCCceEeeeeHHHHHH
Confidence            43    589999999999999962        233443332 23333355566789999999974

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.84  E-value=1.8e-20  Score=204.16  Aligned_cols=214  Identities=20%  Similarity=0.211  Sum_probs=149.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCCCcc--cccc---------ccCCCceEEEeccccch---
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG----DEVIVIDNFFTGRKD--NLVH---------HFRNPRFELIRHDVVEP---  176 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g----~~V~~~~r~~~~~~~--~~~~---------~~~~~~~~~~~~D~~~~---  176 (335)
                      ..++|+|||||||||++++++|++++    ++|+++.|.......  .+..         .....++.++.+|+.++   
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    699999996432211  0100         00123688899998654   


Q ss_pred             --------hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC---------
Q 019794          177 --------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL---------  238 (335)
Q Consensus       177 --------~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~---------  238 (335)
                              ...++|+|||+|+...   ....+..+...|+.|+.+++++|.+.+. +|+|+||..+|+...         
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~---~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVH---WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEec---CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence                    2357999999998643   3344555667899999999999998876 799999999986421         


Q ss_pred             ---CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCC
Q 019794          239 ---EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQ  313 (335)
Q Consensus       239 ---~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~  313 (335)
                         .....|..+....+....++|+.+|+.+|.++..+.. .|++++++|||+|||++....  ...++..++.....-+
T Consensus      1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~ 1205 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG 1205 (1389)
T ss_pred             hccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC
Confidence               1123343332222334457899999999999998765 499999999999999865322  1234444444443322


Q ss_pred             CeEEecCCCceeeceecccccC
Q 019794          314 PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       314 ~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .   +.+....++|++|+|+|+
T Consensus      1206 ~---~p~~~~~~~~~~Vddva~ 1224 (1389)
T TIGR03443      1206 L---IPNINNTVNMVPVDHVAR 1224 (1389)
T ss_pred             C---cCCCCCccccccHHHHHH
Confidence            2   234556789999999874

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK09135 pteridine reductase; Provisional

Probab=99.84  E-value=5.5e-20  Score=163.65  Aligned_cols=164  Identities=16%  Similarity=0.145  Sum_probs=122.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEEeccccchh------------cc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ++++|+||||+|+||++++++|+++|++|++++|......+.....+   ....+.++.+|+.+..            +.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999999986432222211111   1235778889987752            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|+|||+||.......    .+++...+++|+.|+.++++++.+.    +..++++++....                .
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~  148 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE----------------R  148 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc----------------C
Confidence            68999999986443221    2246778999999999999998642    2356666553221                3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~~  294 (335)
                      +..+...|+.+|..+|.+++.++.+.  +++++++|||.++||..
T Consensus       149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~  193 (249)
T PRK09135        149 PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED  193 (249)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence            45566789999999999999998775  69999999999999974

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.6e-20  Score=168.02  Aligned_cols=164  Identities=18%  Similarity=0.112  Sum_probs=122.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+...... ...++.++.+|+.+..            +..
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999887543322111110 1235777889987651            346


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||........    +++...+++|+.++.++++++.    +.+  .++|++||...+                
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~----------------  147 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL----------------  147 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc----------------
Confidence            89999999975433322    2456789999999999998874    333  479999997665                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+..+...|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.
T Consensus       148 ~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  193 (275)
T PRK05876        148 VPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL  193 (275)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence            23344578999999977777777655   38999999999998764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1e-19  Score=164.97  Aligned_cols=161  Identities=20%  Similarity=0.243  Sum_probs=121.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD~  183 (335)
                      .|++|||||+|+||++++++|+++|++|++++|+...... +.... ..++.++.+|+.+..            +.++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999986532221 11111 236788899987652            245899


Q ss_pred             EEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||||||........    +++...+++|+.++.++++++    ++.+. ++|++||....                .+..
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----------------~~~~  143 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ----------------IAYP  143 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc----------------cCCC
Confidence            99999975443322    235678899999999999997    44444 89999996543                1223


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCce---eCCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNT---YGPRM  294 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v---~Gp~~  294 (335)
                      +.+.|+.+|++.|.+++.++.+   .|++++++|||.+   ||++.
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~  189 (276)
T PRK06482        144 GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGL  189 (276)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccc
Confidence            4478999999999999998876   5999999999988   66543

>PRK12320 hypothetical protein; Provisional

Probab=99.83  E-value=1.3e-19  Score=180.32  Aligned_cols=164  Identities=26%  Similarity=0.374  Sum_probs=121.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh----ccCCCEEEEccCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----LLEVDQIYHLACPAS  192 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~vD~Vih~A~~~~  192 (335)
                      |+||||||+||||++++++|+++|++|++++|.....        ....++++.+|+.++.    +.++|+|||+|+...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence            5899999999999999999999999999999853321        1246788999987763    467999999997521


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD  272 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~  272 (335)
                      .        ....+|+.|+.|++++|++.++++|++||.  +|.+                   ..|.    .+|.++..
T Consensus        73 ~--------~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~-------------------~~~~----~aE~ll~~  119 (699)
T PRK12320         73 S--------APGGVGITGLAHVANAAARAGARLLFVSQA--AGRP-------------------ELYR----QAETLVST  119 (699)
T ss_pred             c--------chhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCC-------------------cccc----HHHHHHHh
Confidence            1        122589999999999999999999999986  3321                   0122    35666543


Q ss_pred             HHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          273 YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       273 ~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                          .+++++++|++++|||+......+++..++....+++++.          ++||+|+++
T Consensus       120 ----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~----------vIyVdDvv~  168 (699)
T PRK12320        120 ----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR----------VLHLDDLVR  168 (699)
T ss_pred             ----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE----------EEEHHHHHH
Confidence                4689999999999999764333456666666555554443          489999874

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.83  E-value=1.5e-19  Score=157.48  Aligned_cols=197  Identities=19%  Similarity=0.248  Sum_probs=135.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc-CCCEEEEccCCCCCCC-c
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL-EVDQIYHLACPASPVH-Y  196 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~vD~Vih~A~~~~~~~-~  196 (335)
                      |+||||||+||++|+.+|.+.||+|++++|++......+...     +.  ..+..+.... ++|+|||+||..-... +
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~-----v~--~~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPN-----VT--LWEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcc-----cc--ccchhhhcccCCCCEEEECCCCccccccC
Confidence            689999999999999999999999999999876554433211     11  1222222233 7999999999544333 3


Q ss_pred             cC-ChhhHHhhHHHHHHHHHHHHHHcC--C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019794          197 KY-NPVKTIKTNVMGTLNMLGLAKRVG--A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD  272 (335)
Q Consensus       197 ~~-~~~~~~~~Nv~gt~~ll~~a~~~~--~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~  272 (335)
                      .. .-+..++.-+..|..+.++..+..  . .+|.-|...-||...+...+|+.     +.. ...-+..-..=|+....
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-----~~g-~~Fla~lc~~WE~~a~~  147 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-----PPG-DDFLAQLCQDWEEEALQ  147 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-----CCC-CChHHHHHHHHHHHHhh
Confidence            22 345678888999999999887554  3 35555667889998888888872     221 12233333333444443


Q ss_pred             HHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          273 YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       273 ~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                       ++..|.+++.+|.|+|.|+.     ++.+..++....-+---+ +|+|.++++|||++|+++
T Consensus       148 -a~~~gtRvvllRtGvVLs~~-----GGaL~~m~~~fk~glGG~-~GsGrQ~~SWIhieD~v~  203 (297)
T COG1090         148 -AQQLGTRVVLLRTGVVLSPD-----GGALGKMLPLFKLGLGGK-LGSGRQWFSWIHIEDLVN  203 (297)
T ss_pred             -hhhcCceEEEEEEEEEecCC-----CcchhhhcchhhhccCCc-cCCCCceeeeeeHHHHHH
Confidence             24459999999999999985     666666665554433233 399999999999999863

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.82  E-value=9.2e-20  Score=162.89  Aligned_cols=161  Identities=17%  Similarity=0.068  Sum_probs=120.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      ++++|||||+|+||++++++|+++|++|++++|+...... +...+  ...++.++.+|+.+..            +.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999999997543221 11111  1246788889987752            3568


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||.......    ..++...++.|+.|+..+++.+    ++.+. ++|++||...+..                
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~----------------  143 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA----------------  143 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC----------------
Confidence            999999986543222    1234667889999999888877    44454 8999998755421                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|...+.+++.++.+   .+++++++||+.++++.
T Consensus       144 ~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       144 SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence            122367999999999999888765   38999999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=2.1e-19  Score=156.36  Aligned_cols=215  Identities=28%  Similarity=0.323  Sum_probs=174.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc-----cccCCCceEEEeccccch-------hccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV-----HHFRNPRFELIRHDVVEP-------ILLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~-------~~~~vD  182 (335)
                      ++|+.||||-||+-|++|++.|+++|++|+.+.|..+.......     ......++.++.+|++|.       ....+|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            36799999999999999999999999999999997554433321     122445689999999986       235699


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      -|+|+|+..+...+.+.|..+.+++..||.+++++.+-.+   +||...||+..||.-...+.+|+     .|+.|.++|
T Consensus        81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSPY  155 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPY  155 (345)
T ss_pred             hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCHH
Confidence            9999999988888889999999999999999999998764   48999999999999999999999     899999999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-CcchHHHHHHHHHhCCC-eEEecCCCceeeceeccccc
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-~~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva  334 (335)
                      +.+|..+--....|.+.+|+-.+.-..+|--+|..+.. -++-+...+..+..|.. -...|+-+..|||=|..|-+
T Consensus       156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYV  232 (345)
T COG1089         156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYV  232 (345)
T ss_pred             HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHH
Confidence            99999999999999888999888877777767753211 13445555566665543 33348989999999998865

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-19  Score=162.70  Aligned_cols=163  Identities=17%  Similarity=0.054  Sum_probs=121.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      ++++|+||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.++.            ...+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999755332211111 02346788899987652            2469


Q ss_pred             CEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||........    +.+...+++|+.++.++++.+    ++.+. +||++||...+.                +
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----------------~  146 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV----------------G  146 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------C
Confidence            9999999865443222    234567889999966666554    44454 899999975542                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....+.|+.+|.+.+.+.+.++.+   .++++++++||.++++.
T Consensus       147 ~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~  190 (258)
T PRK12429        147 SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPL  190 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchh
Confidence            334578999999999999988765   37999999999999975

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.82  E-value=8.3e-20  Score=163.77  Aligned_cols=162  Identities=15%  Similarity=0.127  Sum_probs=123.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++++++||||+|+||.+++++|+++|++|++++|+........ ... ...+.++.+|+.++            .+..+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAA-LEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45679999999999999999999999999999998754322211 111 23577888898765            12469


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |+|||+||.......    .+++...+++|+.++.++++++...      +.++|++||....                .
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~----------------~  145 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR----------------R  145 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC----------------C
Confidence            999999986543222    2356778999999999999988542      2479999995432                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|.+.+.+++.++.+   .|+++++++||.++++.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  190 (257)
T PRK07067        146 GEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM  190 (257)
T ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence            2234467999999999999998875   58999999999999974

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.82  E-value=2.7e-19  Score=159.42  Aligned_cols=166  Identities=19%  Similarity=0.087  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+............ ....+.++.+|+.++.            +..
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            456799999999999999999999999999999997543222111111 1235788899987751            236


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||++|......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+.               .
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---------------~  148 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---------------V  148 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc---------------c
Confidence            999999998655422    223567789999999999998874    3333 899999976651               1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                      +......|+.+|..++.+++.++.+   .+++++++|||.++|+..
T Consensus       149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (251)
T PRK12826        149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA  194 (251)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence            2233467999999999999998766   389999999999999864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.82  E-value=7.1e-20  Score=185.58  Aligned_cols=188  Identities=18%  Similarity=0.125  Sum_probs=138.1

Q ss_pred             CCCCCccccchhhhhhhhhhcccCCCCCCCCCCCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc
Q 019794           76 QELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD  155 (335)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~  155 (335)
                      ...+++++|..++.+.              .+.|......+++|+||||+|+||++++++|+++|++|++++|+......
T Consensus       396 ~~~f~i~~~~~e~a~l--------------~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~  461 (681)
T PRK08324        396 QEAFDIEYWSLEQAKL--------------QRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEA  461 (681)
T ss_pred             hhhcceeeehhhhhhh--------------hcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHH
Confidence            4566778998886651              12222334578899999999999999999999999999999997643322


Q ss_pred             ccccccCCCceEEEeccccchh------------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH
Q 019794          156 NLVHHFRNPRFELIRHDVVEPI------------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK  219 (335)
Q Consensus       156 ~~~~~~~~~~~~~~~~D~~~~~------------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~  219 (335)
                      ..........+.++.+|+.++.            ..++|+||||||.......    .+.+...+++|+.|+.++++++.
T Consensus       462 ~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  541 (681)
T PRK08324        462 AAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAV  541 (681)
T ss_pred             HHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1111111146778888987651            3479999999996544332    23467789999999999987764


Q ss_pred             H----c--CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCcee
Q 019794          220 R----V--GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTY  290 (335)
Q Consensus       220 ~----~--~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~  290 (335)
                      +    .  +.+||++||...+.                +......|+.+|...+.+++.++.+.   |+++++++|+.||
T Consensus       542 ~~l~~~~~~g~iV~vsS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~  605 (681)
T PRK08324        542 RIMKAQGLGGSIVFIASKNAVN----------------PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV  605 (681)
T ss_pred             HHHHhcCCCcEEEEECCccccC----------------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence            3    2  34899999976542                22334689999999999999998765   6999999999998


Q ss_pred             -CCC
Q 019794          291 -GPR  293 (335)
Q Consensus       291 -Gp~  293 (335)
                       +++
T Consensus       606 ~~t~  609 (681)
T PRK08324        606 RGSG  609 (681)
T ss_pred             cCCc
Confidence             654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.82  E-value=1.4e-19  Score=154.04  Aligned_cols=169  Identities=30%  Similarity=0.417  Sum_probs=127.4

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPASP  193 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~~~  193 (335)
                      |+|+||||++|+.++++|+++|++|+++.|++.+..+       ...++++.+|+.+.     ++.++|+||++++....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999997653332       57889999999776     57799999999964221


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD  272 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~  272 (335)
                                   +...+.+++++|++.++ ++|++|+..+|.........+.     .  .....|...|..+|.+++ 
T Consensus        74 -------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~e~~~~-  132 (183)
T PF13460_consen   74 -------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED-----K--PIFPEYARDKREAEEALR-  132 (183)
T ss_dssp             -------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT-----C--GGGHHHHHHHHHHHHHHH-
T ss_pred             -------------cccccccccccccccccccceeeeccccCCCCCccccccc-----c--cchhhhHHHHHHHHHHHH-
Confidence                         28888899999999998 8999999999875443211111     0  111468888988888774 


Q ss_pred             HHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          273 YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       273 ~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                         +.+++++++||+.+||+...  ...+               ....+....++|+.+|+|+
T Consensus       133 ---~~~~~~~ivrp~~~~~~~~~--~~~~---------------~~~~~~~~~~~i~~~DvA~  175 (183)
T PF13460_consen  133 ---ESGLNWTIVRPGWIYGNPSR--SYRL---------------IKEGGPQGVNFISREDVAK  175 (183)
T ss_dssp             ---HSTSEEEEEEESEEEBTTSS--SEEE---------------ESSTSTTSHCEEEHHHHHH
T ss_pred             ---hcCCCEEEEECcEeEeCCCc--ceeE---------------EeccCCCCcCcCCHHHHHH
Confidence               35999999999999998632  1111               1113345568999999873

...

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.6e-19  Score=160.44  Aligned_cols=163  Identities=15%  Similarity=0.155  Sum_probs=125.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC--CCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+...... ....+.  ..++..+.+|+.++.            +.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-VAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999999987543222 211111  245788899987651            24


Q ss_pred             CCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+|||+||......     ..+.+...+++|+.++..+++++.+.    +.++|++||...+                
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~----------------  145 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR----------------  145 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc----------------
Confidence            6899999998643311     22356788999999999999998652    3489999997554                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+..+...|+.+|.+.+.+++.++.+.   ++++++++||.++++.
T Consensus       146 ~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~  191 (258)
T PRK07890        146 HSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP  191 (258)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence            233445689999999999999998764   8999999999999985

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.82  E-value=2.6e-19  Score=160.28  Aligned_cols=166  Identities=20%  Similarity=0.299  Sum_probs=116.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hc-cCCCEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------IL-LEVDQIY  185 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~-~~vD~Vi  185 (335)
                      ...+|+|+||||||+||+.++++|+++|++|+++.|+.+.......   ....++++.+|+.+.      .+ .++|+||
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            3457899999999999999999999999999999987543221111   123578888888762      34 4799999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      |+++....    .++...+++|..++.++++++++.+. +||++||..+|+.....+..+.+    ....+...|...|.
T Consensus        91 ~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~----~~~~~~~~~~~~k~  162 (251)
T PLN00141         91 CATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAY----IFLNLFGLTLVAKL  162 (251)
T ss_pred             ECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcch----hHHHHHHHHHHHHH
Confidence            99875321    12233457899999999999998886 89999999998754322211110    01111223445677


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      .+|.+++.    .+++++++||+.+++..
T Consensus       163 ~~e~~l~~----~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        163 QAEKYIRK----SGINYTIVRPGGLTNDP  187 (251)
T ss_pred             HHHHHHHh----cCCcEEEEECCCccCCC
Confidence            77776643    58999999999999864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.81  E-value=6.1e-19  Score=158.35  Aligned_cols=159  Identities=16%  Similarity=0.103  Sum_probs=118.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+..  .......+  ....+.++.+|+.+.            .+.
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999998642  11111111  123566788888764            134


Q ss_pred             CCCEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|+||||||.... ..    ...++...+++|+.++..+++.+.    +.+. ++|++||...++.             
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------  150 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence            69999999984321 11    223467788999999887666543    4444 8999999876531             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                           ....|+.+|++.+.+++.++.+.   |+++++++||.|+++
T Consensus       151 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T PRK12823        151 -----NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP  191 (260)
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence                 12469999999999999998875   899999999999997

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.81  E-value=1.3e-18  Score=161.47  Aligned_cols=180  Identities=14%  Similarity=0.137  Sum_probs=125.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh-----c-------cCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI-----L-------LEV  181 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~-------~~v  181 (335)
                      ++++|+||||+|+||.+++++|+++|++|++++|+.....+..... .....+.++.+|+.+..     +       ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5679999999999999999999999999999998754322211111 12246788889987651     1       249


Q ss_pred             CEEEEccCCCCCC-----CccCChhhHHhhHHHHHHHHHHHHHH----cC---CeEEEEecccccCCCCC----CCCCCC
Q 019794          182 DQIYHLACPASPV-----HYKYNPVKTIKTNVMGTLNMLGLAKR----VG---AKFLLTSTSEVYGDPLE----HPQKET  245 (335)
Q Consensus       182 D~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~---~r~v~iSS~~v~~~~~~----~~~~E~  245 (335)
                      |+||||||.....     ...+.++..+++|+.|+.++++++.+    .+   .|+|++||...+.....    .+..++
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~  164 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD  164 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence            9999999964321     12235678899999999999888754    22   38999999765432100    000000


Q ss_pred             c---------------CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCceeCCCC
Q 019794          246 Y---------------WGNVNPIGERSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       246 ~---------------~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v~Gp~~  294 (335)
                      .               +....+..+...|+.||.+.+.+.+.+++++    |+++++++||+|++...
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL  232 (322)
T ss_pred             hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence            0               0011234566789999999988888888764    79999999999987543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.7e-19  Score=158.86  Aligned_cols=162  Identities=14%  Similarity=0.108  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..+|+++||||+|+||++++++|+++|++|++++|+...... .....  ...++.++.+|+.+..            +.
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEE-LVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            456799999999999999999999999999999886432221 11111  1235778888987652            34


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+|||+||........    +++...+++|+.++.++++.+.+    .+ .+||++||...+.               
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~---------------  151 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR---------------  151 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC---------------
Confidence            689999999865432221    24556789999999999988753    23 3799999987663               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.|.+++.++.+.   |++++++|||.+.++
T Consensus       152 -~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~  195 (274)
T PRK07775        152 -QRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG  195 (274)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence             22234579999999999999998764   899999999988654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.9e-19  Score=159.01  Aligned_cols=160  Identities=14%  Similarity=0.047  Sum_probs=121.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      .+++|+||||+|+||++++++|+++|++|++++|+...... +... ...++..+.+|+.++.            +.++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD-FEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH-HHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999999997543221 1111 1235777888887652            23689


Q ss_pred             EEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||........    +.+...+++|+.|+.++++++.+    .+ .++|++||...+.                +.
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~----------------~~  144 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI----------------TM  144 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC----------------CC
Confidence            999999975433322    23566799999999999998543    33 3899999976542                22


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .+...|+.+|++.|.+++.++.+   .|+++++++||.++++
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  186 (277)
T PRK06180        145 PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD  186 (277)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence            34468999999999999998876   4899999999999775

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=7.8e-19  Score=155.90  Aligned_cols=165  Identities=18%  Similarity=0.126  Sum_probs=124.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++|+|+||||+|+||++|+++|+++|++|+++.|......+......  ...++.++.+|+.+..            +.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            356799999999999999999999999999887775443222221111  1245788889987652            24


Q ss_pred             CCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+|||+||......    ..+.+...+++|+.++.++++.+.    +.+. ++|++||...+.               
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~---------------  148 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP---------------  148 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC---------------
Confidence            6899999999644333    223457789999999999999873    4444 899999977652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                       +......|+.+|...+.+++.++.+   .+++++++|||.++|+..
T Consensus       149 -~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~  194 (249)
T PRK12825        149 -GWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMK  194 (249)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcc
Confidence             2223467999999999999988776   489999999999999863

>PRK06128 oxidoreductase; Provisional

Probab=99.81  E-value=7.9e-19  Score=161.21  Aligned_cols=164  Identities=16%  Similarity=0.149  Sum_probs=125.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccccc--CCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      .++|++|||||+|+||++++++|+++|++|++.++..+... +.....+  ...++.++.+|+.+.            .+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999998877543211 1111111  123567888998764            23


Q ss_pred             cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|+||||||......     ..+++...+++|+.++.++++++.+.   +.++|++||...|.               
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~---------------  197 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ---------------  197 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC---------------
Confidence            46999999998643221     23457889999999999999998753   34899999987763               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       198 -~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~  242 (300)
T PRK06128        198 -PSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL  242 (300)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence             2223456999999999999999876   48999999999999985

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-18  Score=155.21  Aligned_cols=164  Identities=17%  Similarity=0.074  Sum_probs=123.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+...............++.++.+|+.++.            +.++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999875432221211112345788999997751            2479


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||.......    .+.+...+++|+.++.++.+.+.    +.+. ++|++||...+.                +
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----------------~  146 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA----------------G  146 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc----------------C
Confidence            999999996543322    22356679999999988777653    4444 899999975431                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (252)
T PRK06138        147 GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY  190 (252)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence            2234679999999999999998765   8999999999999875

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-18  Score=156.24  Aligned_cols=161  Identities=14%  Similarity=0.094  Sum_probs=119.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CCceEEEeccccchh------------ccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      +|+|+||||+|+||.+++++|+++|++|++++|+.+...+ ...... ..++.++.+|+.++.            ...+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQA-FAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4799999999999999999999999999999987543221 111111 126788999997751            23489


Q ss_pred             EEEEccCCCCCCCc-----cCChhhHHhhHHHHHHHHHHH----HHHcC-CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGL----AKRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~----a~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||.......     .+++...+++|+.|+.++++.    +++.+ .++|++||...+                .+
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~----------------~~  144 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV----------------RG  144 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc----------------CC
Confidence            99999986543221     134678899999999998874    34444 389999986543                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        145 LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence            223457999999999999988754   48999999999998874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.80  E-value=2.9e-19  Score=160.38  Aligned_cols=161  Identities=19%  Similarity=0.140  Sum_probs=119.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch------------hccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      +++|+||||+|+||+++++.|+++|++|++++|+.........   .......+.++.+|+.++            .+..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999987543222111   111124578899998764            1246


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEeccc-ccCCCCCCCCCCCcCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSE-VYGDPLEHPQKETYWGN  249 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~-v~~~~~~~~~~E~~~~~  249 (335)
                      +|+|||+||........    +++...+++|+.++.++++++.+    .+  .++|++||.. .++              
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~--------------  147 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG--------------  147 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC--------------
Confidence            89999999865443322    24567889999999988887644    34  3899998854 232              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.++++.
T Consensus       148 ---~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~  191 (259)
T PRK12384        148 ---SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP  191 (259)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence               122357999999999999998864   58999999999998765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=1.6e-18  Score=155.20  Aligned_cols=164  Identities=16%  Similarity=0.107  Sum_probs=124.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC--CCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~------------~~  178 (335)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.....+. ...+.  ..++.++.+|+.++            .+
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAA-AESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999875432221 11111  23577888898765            13


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+|||+||........    +.+.+.+++|+.++.++++++.+.    +. ++|++||....               
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------------  150 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA---------------  150 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc---------------
Confidence            4589999999975433322    235678899999999999988653    33 89999986543               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       151 -~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  196 (255)
T PRK07523        151 -LARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL  196 (255)
T ss_pred             -cCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence             22334567999999999999999874   48999999999999875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.80  E-value=1.3e-18  Score=149.89  Aligned_cols=161  Identities=14%  Similarity=0.081  Sum_probs=126.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++|.++||||+++||.+++++|++.|++|++..|..+...+. ...+....+.....|++|.            .+.++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~l-a~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEAL-ADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHH-HHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3457999999999999999999999999999999976544333 2333335678888899886            24569


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |++|||||.......    .++|..++++|+.|..+..++...    .+ ..+|++||....                .+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------------~~  146 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------------YP  146 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------------cc
Confidence            999999997654332    236899999999999999988643    33 389999997532                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      ....+.|+.+|+....+...+..+.   +++++.+-||.|-.
T Consensus       147 y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~  188 (246)
T COG4221         147 YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET  188 (246)
T ss_pred             CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence            4556789999999999999888774   89999999999844

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.2e-18  Score=154.56  Aligned_cols=156  Identities=19%  Similarity=0.171  Sum_probs=121.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      ++++|+||||+|+||++++++|+++|++|++++|+......       ...++++.+|+.++            .+..+|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            35689999999999999999999999999999987543221       23567888898775            134689


Q ss_pred             EEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||........    +++...+++|+.|+.++++++    ++.+. ++|++||...+.                +.
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  139 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL----------------PA  139 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC----------------CC
Confidence            999999975443322    246788999999999999885    44454 899999975542                22


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|...+.+++.++.+   .|+++++++||.+.++.
T Consensus       140 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~  182 (270)
T PRK06179        140 PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF  182 (270)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence            23467999999999999998765   49999999999998764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=154.53  Aligned_cols=161  Identities=16%  Similarity=0.153  Sum_probs=120.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++++|+||||+|+||++++++|+++|++|++++|+.+...+.. ... ..++.++.+|+.+.            .+.++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR-AEL-GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-HHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            35679999999999999999999999999999988643222111 111 23566778887654            12468


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH---cCCeEEEEecc-cccCCCCCCCCCCCcCCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR---VGAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~---~~~r~v~iSS~-~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |+|||+||.......    .+++...+++|+.++.++++++.+   .+.++|++||. ..|+                 .
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~-----------------~  144 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG-----------------M  144 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC-----------------C
Confidence            999999986543222    235678999999999999999975   23477877774 3443                 1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|++.|.+++.++.+.   |+++++++||.++++.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~  187 (249)
T PRK06500        145 PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL  187 (249)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence            233679999999999999988764   8999999999999874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=155.32  Aligned_cols=164  Identities=17%  Similarity=0.089  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++++++||||+|+||++++++|+++|++|+++.+......+......  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999999876553222111111111  1235788899997752            24


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----c-CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----V-GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~-~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+|||+||........    +.+...+++|+.++.++++++..    . +.++|++||...+.               
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------  148 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA---------------  148 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC---------------
Confidence            589999999975443322    35677899999999999998864    2 23899999965431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       +..+...|+.+|.+.+.+++.++.+.   ++++++++||.+.++.
T Consensus       149 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (247)
T PRK12935        149 -GGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM  193 (247)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence             11234679999999999998888764   8999999999998753

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.3e-18  Score=156.06  Aligned_cols=161  Identities=16%  Similarity=0.145  Sum_probs=122.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      ++|+|+||||+|+||++++++|+++|++|++++|+...... ..... ...+.++.+|+.++.            +..+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLAD-LAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999999999999999999999999999987543221 11111 235677888887641            24689


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||.......    .+++.+.+++|+.++.++++.+    ++.+. ++|++||...+.                +.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~  143 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS----------------AF  143 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC----------------CC
Confidence            99999997544322    2356788999999998888876    34444 899999976653                22


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|+..+.+.+.++.+   .|++++++|||.+..+.
T Consensus       144 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~  186 (275)
T PRK08263        144 PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW  186 (275)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence            33467999999999999998876   58999999999887754

>PLN02253 xanthoxin dehydrogenase

Probab=99.79  E-value=1.6e-18  Score=157.46  Aligned_cols=164  Identities=18%  Similarity=0.117  Sum_probs=122.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|......+.........++.++.+|+.++.            +.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999998864332211111111246788899997751            246


Q ss_pred             CCEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccc-cCCCCCCCCCCCcCC
Q 019794          181 VDQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEV-YGDPLEHPQKETYWG  248 (335)
Q Consensus       181 vD~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v-~~~~~~~~~~E~~~~  248 (335)
                      +|+||||||......      ..++++..+++|+.|+.++++++.+.    + .++|++||... ++.            
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------  162 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------------  162 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC------------
Confidence            999999998643211      12356789999999999999887542    2 37899888543 321            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                           .....|+.+|.+.|.+++.++.+.   ++++++++||.+.++.
T Consensus       163 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        163 -----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             -----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence                 122469999999999999998874   8999999999998763

>PRK07985 oxidoreductase; Provisional

Probab=99.79  E-value=1.8e-18  Score=158.39  Aligned_cols=164  Identities=17%  Similarity=0.154  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC-cccccccc--CCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+.... .+.+....  ...++.++.+|+.++            .+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999887653321 11121111  123567788898775            23


Q ss_pred             cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|++|||||......     ..+++...+++|+.++.++++++.+.   +.++|++||...+.               
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~---------------  191 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ---------------  191 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc---------------
Confidence            56899999998532111     23457789999999999999988653   35899999987763               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       192 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~  236 (294)
T PRK07985        192 -PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence             2223357999999999999999887   48999999999999985

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.79  E-value=1e-18  Score=177.16  Aligned_cols=168  Identities=19%  Similarity=0.253  Sum_probs=118.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEE-EEecCCCCCccccccccCCCceEEEeccccchhc--cCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVI-VIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--LEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~vD~Vih~A~~  190 (335)
                      .+.|+||||||+||||++|++.|.++|++|. ...+                   +.+.+.....+  .++|+|||+|+.
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-------------------l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-------------------LEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-------------------cccHHHHHHHHHhhCCCEEEECCcc
Confidence            3557999999999999999999999999884 2211                   00111111122  368999999997


Q ss_pred             CCCC---CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCC------CCCCCCCcCCCCCCCCCCChHHH
Q 019794          191 ASPV---HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL------EHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       191 ~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~------~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      ....   ..+.++...+++|+.|+.+++++|++.++++|++||..+|+...      ..+..|++    .+..+.+.|+.
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg~  514 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYSK  514 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhhH
Confidence            6432   23457889999999999999999999999889999988986421      23556653    23334488999


Q ss_pred             HHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCC
Q 019794          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQP  314 (335)
Q Consensus       262 sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~  314 (335)
                      +|.++|.+++.+.     ++.++|+..+||.+.. .    ..+|+..+++...
T Consensus       515 sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~-~----~~nfv~~~~~~~~  557 (668)
T PLN02260        515 TKAMVEELLREYD-----NVCTLRVRMPISSDLS-N----PRNFITKISRYNK  557 (668)
T ss_pred             HHHHHHHHHHhhh-----hheEEEEEEecccCCC-C----ccHHHHHHhccce
Confidence            9999999998763     4677888888865321 1    1355555555444

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.7e-18  Score=152.60  Aligned_cols=159  Identities=16%  Similarity=0.142  Sum_probs=121.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ...++|+|+||||+|+||++++++|+++|++|++++|+....        ....+.++.+|+.++.            +.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            346788999999999999999999999999999999874321        1235678888987652            35


Q ss_pred             CCCEEEEccCCCCCC------CccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPV------HYKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+|+||||||.....      ...+++...+++|+.++.++++++.    +.+. ++|++||...+..            
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------------  144 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP------------  144 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC------------
Confidence            689999999853211      1223577889999999988877653    3343 7999999765421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         .......|+.+|...+.+++.++.+.   |+++++++||.+.++.
T Consensus       145 ---~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        145 ---LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence               01234679999999999999998764   8999999999998875

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.79  E-value=3.1e-18  Score=151.90  Aligned_cols=165  Identities=15%  Similarity=0.092  Sum_probs=122.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|+|+||||+|+||.+++++|+++|++|++++|+........... ....++.++.+|+.++.            +..
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35679999999999999999999999999999998754322111111 01245778889987651            245


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||+||.......    .+.+...++.|+.++.++++.+.    +.+. ++|++||.....                
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----------------  146 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----------------  146 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------------
Confidence            7999999986543221    22356789999999999998884    3444 899999864431                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                      +..+...|+.+|...+.+++.++++   .+++++++||+.++|+..
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~  192 (246)
T PRK05653        147 GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMT  192 (246)
T ss_pred             CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcch
Confidence            2233467999999999999998765   389999999999999863

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-18  Score=155.46  Aligned_cols=162  Identities=14%  Similarity=0.079  Sum_probs=121.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      +++|+||||+|+||.+++++|++.|++|++++|+........... .....+.++.+|+.+..            +.++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999998754322111111 01236778889987752            24699


Q ss_pred             EEEEccCCCCCCCccC-----ChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHYKY-----NPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||+||........+     .+.+.+++|+.++.++++.+.+    .+.++|++||...+.                +.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  144 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT----------------GV  144 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC----------------CC
Confidence            9999998755433222     2466799999999999998753    234899999976652                22


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+...|+.+|...+.+.+.++.+   .++++++++||.+..+.
T Consensus       145 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  187 (263)
T PRK06181        145 PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI  187 (263)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence            33468999999999999888754   48999999999987653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.8e-18  Score=154.83  Aligned_cols=162  Identities=14%  Similarity=0.059  Sum_probs=121.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .|+++||||+|+||++++++|+++|++|++++|............+  ...++.++.+|+.++.            +..+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            3689999999999999999999999999999886432211111111  1246788899998752            2469


Q ss_pred             CEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHHc-----C-----C-eEEEEecccccCCCCCCCCCC
Q 019794          182 DQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKRV-----G-----A-KFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       182 D~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~-----~-r~v~iSS~~v~~~~~~~~~~E  244 (335)
                      |+||||||......      ..+.+...+++|+.++.++++++.+.     +     . ++|++||...+.         
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~---------  152 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM---------  152 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc---------
Confidence            99999998643211      12356778999999999998887542     1     2 699999976542         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                             +..+.+.|+.+|.+.|.+++.++.+   .|+++++++||.++++.
T Consensus       153 -------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~  197 (256)
T PRK12745        153 -------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM  197 (256)
T ss_pred             -------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence                   2233467999999999999999875   58999999999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=99.79  E-value=5.2e-18  Score=152.40  Aligned_cols=153  Identities=17%  Similarity=0.128  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      +++|+++||||+|+||++++++|++.|++|++++|+....          ..+.++.+|+.++            .+..+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999998864321          2567888888765            12469


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||.......    .+++...+++|+.|+.++++++.+    .+ .++|++||...+.                +
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  137 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----------------V  137 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc----------------C
Confidence            999999996433222    224667899999999999888753    23 4899999976652                3


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|++.+.+++.++.+.  ++++++++||.+-.+
T Consensus       138 ~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~  179 (258)
T PRK06398        138 TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP  179 (258)
T ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence            3445689999999999999998875  499999999988654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.79  E-value=2.6e-18  Score=153.05  Aligned_cols=163  Identities=13%  Similarity=0.078  Sum_probs=123.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+........... ....+..+.+|+.+.            ...++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            56889999999999999999999999999999988542111111111 124578888998765            12469


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |+||||||.......    .+++.+.+++|+.++.++++++.+    .+  .++|++||...+..               
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------------  146 (248)
T TIGR01832        82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG---------------  146 (248)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC---------------
Confidence            999999997543322    235677899999999999998753    23  38999999876632               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       ......|+.+|++.+.+++.++++.   |+++++++||.+..+.
T Consensus       147 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  190 (248)
T TIGR01832       147 -GIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN  190 (248)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence             1223579999999999999999874   8999999999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.79  E-value=2.4e-18  Score=173.82  Aligned_cols=187  Identities=18%  Similarity=0.190  Sum_probs=137.1

Q ss_pred             CCCCCCCccccchhhhhhhhhhcccCCCCCCCCCCCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794           74 PPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      +....+.+++|..|+.|              ..+.|....+++|+||||||+|+||++++++|+++|++|++++|+....
T Consensus       386 ~~~~~f~~eyw~~e~~k--------------l~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~  451 (676)
T TIGR02632       386 PEQEAFDIEYWPLEEAK--------------LRRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA  451 (676)
T ss_pred             chhhccchhhhhhhHHh--------------hccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            34567788999999776              2234444557789999999999999999999999999999999875432


Q ss_pred             cccccc---ccCCCceEEEeccccch------------hccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHH
Q 019794          154 KDNLVH---HFRNPRFELIRHDVVEP------------ILLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNM  214 (335)
Q Consensus       154 ~~~~~~---~~~~~~~~~~~~D~~~~------------~~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~l  214 (335)
                      ......   ......+..+.+|++++            .+.++|+||||||........    +++...+++|+.+...+
T Consensus       452 ~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l  531 (676)
T TIGR02632       452 EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLV  531 (676)
T ss_pred             HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            211111   11223567788998775            124799999999965433222    24677889999998887


Q ss_pred             HHHHH----HcC--CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEE
Q 019794          215 LGLAK----RVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIAR  285 (335)
Q Consensus       215 l~~a~----~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivR  285 (335)
                      ++.+.    +.+  .++|++||...+.                +......|+.+|.+.+.+++.++.+.   |++++.++
T Consensus       532 ~~~al~~m~~~~~~g~IV~iSS~~a~~----------------~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~  595 (676)
T TIGR02632       532 AREAFRQMREQGLGGNIVFIASKNAVY----------------AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVN  595 (676)
T ss_pred             HHHHHHHHHhcCCCCEEEEEeChhhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEE
Confidence            75543    333  4899999965431                22234689999999999999998863   79999999


Q ss_pred             eCcee
Q 019794          286 IFNTY  290 (335)
Q Consensus       286 p~~v~  290 (335)
                      |+.|+
T Consensus       596 Pg~V~  600 (676)
T TIGR02632       596 PDAVL  600 (676)
T ss_pred             CCcee
Confidence            99987

>PRK06196 oxidoreductase; Provisional

Probab=99.79  E-value=2.9e-18  Score=158.52  Aligned_cols=174  Identities=16%  Similarity=0.134  Sum_probs=124.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ..++|+|+||||+|+||.+++++|+++|++|++++|+.....+... .+  ..+.++.+|+.+..            ..+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~-~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA-GI--DGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh--hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            3467899999999999999999999999999999987543222111 11  23678889987651            246


Q ss_pred             CCEEEEccCCCCCCC--ccCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          181 VDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       181 vD~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|+||||||......  ..+.++..+++|+.++..+++.+    ++.+ .++|++||........  ..++..+  ..+.
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~--~~~~~~~--~~~~  175 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPI--RWDDPHF--TRGY  175 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCC--CccccCc--cCCC
Confidence            999999999654322  23356788999999987777654    3444 4899999964432110  0111100  1233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+...|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~  218 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL  218 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence            44568999999999999988765   48999999999999885

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.6e-18  Score=153.26  Aligned_cols=161  Identities=18%  Similarity=0.138  Sum_probs=122.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++|+++||||+|+||.+++++|+++|++|++++|+...... ....+  ....+..+.+|+.+..            +.
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAER-VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999999987543221 11111  1235677888987752            24


Q ss_pred             CCCEEEEccCCCCCCC-------ccCChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          180 EVDQIYHLACPASPVH-------YKYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .+|+|||+||......       ..+.+.+.+++|+.++.++++++.+.     +.++|++||..+|.            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------  150 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------  150 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence            6899999999643211       12345678999999999999988653     24899999977652            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                             +.+.|+.+|++.|.+++.++++.   ++++++++||.+..+..
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  193 (250)
T PRK07774        151 -------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT  193 (250)
T ss_pred             -------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence                   23579999999999999998774   79999999999887753

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-18  Score=153.12  Aligned_cols=164  Identities=18%  Similarity=0.136  Sum_probs=123.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---ccc--CCCceEEEeccccchh-----------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHF--RNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~--~~~~~~~~~~D~~~~~-----------  177 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|......+...   ...  ....+.++.+|+.+..           
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999998875332221111   111  1246788899987651           


Q ss_pred             -ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH-----HcCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          178 -LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK-----RVGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~-----~~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                       ..++|+|||+||.......    .+++...+++|+.++.++++++.     +.+. ++|++||...+.           
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  152 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR-----------  152 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC-----------
Confidence             2469999999997553222    23456789999999999999987     3343 899999976552           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.+|...+.+++.++.+.   ++++++++||.++++.
T Consensus       153 -----~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  197 (249)
T PRK12827        153 -----GNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM  197 (249)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence                 22334679999999999999988763   8999999999999975

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.6e-18  Score=154.07  Aligned_cols=163  Identities=18%  Similarity=0.226  Sum_probs=124.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ++++++++||||+|+||++++++|+++|++|++++|+....  .....+  ...++.++.+|+.++.            +
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46778999999999999999999999999999999876543  111111  1245788999997651            2


Q ss_pred             cCCCEEEEccCCCCCCCcc---CChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYK---YNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ..+|+|||+||.......+   +++...+++|+.++.++++.+.+    .+.+||++||...+.                
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  145 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT----------------  145 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc----------------
Confidence            4689999999854322222   35677899999999999888753    234799999965541                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|+..+.+++.++.+   .+++++.++||.++++.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        146 GQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence            2233467999999999999999865   48999999999999974

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=3.2e-18  Score=153.66  Aligned_cols=193  Identities=15%  Similarity=0.110  Sum_probs=133.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|+++||||+|+||.++++.|+++|++|++++|+........... ....++.++.+|+.++.            ...
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999998653222111111 11235778899998751            246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----CC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----GA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+|||+||.......    .+.+...+++|+.++.++++++.+.     +. +||++||...+.....           
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-----------  158 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-----------  158 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----------
Confidence            8999999986432221    2345678899999999999987654     43 8999999755432110           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGK  322 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~  322 (335)
                       ...+...|+.+|++.+.+++.++++.   |+++++++|+.+-.+..    ...++.+.+....+.++..+++++
T Consensus       159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~  228 (259)
T PRK08213        159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT----RGTLERLGEDLLAHTPLGRLGDDE  228 (259)
T ss_pred             -cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch----hhhhHHHHHHHHhcCCCCCCcCHH
Confidence             11234679999999999999998764   79999999998866532    234445555555554444444443

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.3e-18  Score=155.30  Aligned_cols=157  Identities=17%  Similarity=0.201  Sum_probs=118.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------c-cCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------L-LEV  181 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~-~~v  181 (335)
                      ++++|+||||+|+||++++++|+++|++|++++|+...... +    ....++++.+|+.++.            . ..+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-L----EAEGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H----HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            35789999999999999999999999999999987543221 1    1234678888987751            1 358


Q ss_pred             CEEEEccCCCCCCCcc----CChhhHHhhHHHH----HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHYK----YNPVKTIKTNVMG----TLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~----~~~~~~~~~Nv~g----t~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||........    +.+...+++|+.|    +..++..+++.+. ++|++||...+                .+
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~----------------~~  141 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL----------------VP  141 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc----------------CC
Confidence            9999999875443322    2356789999999    4455666666664 89999997554                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|++.+.+++.++.+   .|+++++++||.+-.+
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        142 MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            344578999999999999988755   5899999999998765

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=155.85  Aligned_cols=164  Identities=15%  Similarity=0.006  Sum_probs=121.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++++|+||||+|+||++++++|+++|++|+++.+.............  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            356799999999999999999999999999887764322111111111  1134567788886641            34


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      ++|+|||+||........    ..+...+++|+.++.++++++.+.   ..+||++||...+                .+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------------~~  147 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI----------------RP  147 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc----------------CC
Confidence            689999999964333222    124578899999999999988753   2379999998766                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                      ..+.+.|+.+|...|.+++.++.+.  ++++.+++||.+.++.
T Consensus       148 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~  190 (252)
T PRK06077        148 AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL  190 (252)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence            4556789999999999999998875  7999999999997763

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=3.5e-18  Score=152.31  Aligned_cols=164  Identities=15%  Similarity=0.087  Sum_probs=123.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++++||||+|+||.+++++|+++|++|++++|+................+.++.+|+.++.            +..+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999976432221111111245778899987651            2368


Q ss_pred             CEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |+|||+||......     ..+.+...+++|+.++.++++.+.+    .+ .+||++||...+.                
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  146 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR----------------  146 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----------------
Confidence            99999998643222     1234677899999998888877654    33 3799999976653                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|...+.+++.++.+.   ++++++++||.+.++.
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  191 (251)
T PRK07231        147 PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL  191 (251)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence            33445679999999999999988753   8999999999997653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.78  E-value=2.3e-18  Score=166.91  Aligned_cols=164  Identities=16%  Similarity=0.128  Sum_probs=120.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----------cCCCceEEEeccccch-----hc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----------FRNPRFELIRHDVVEP-----IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~-----~~  178 (335)
                      .++++||||||+|+||++++++|+++|++|++++|+...........          ....+++++.+|+.+.     .+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46789999999999999999999999999999999765432211100          0113578899999764     46


Q ss_pred             cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      .++|+|||++|....  ...++...+++|+.|+.+++++|++.++ +||++||..++....    .+.      ......
T Consensus       158 ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~------~~~sk~  225 (576)
T PLN03209        158 GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA------ILNLFW  225 (576)
T ss_pred             cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc------chhhHH
Confidence            789999999985421  1124667789999999999999999886 899999986531110    000      112335


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      .|...|..+|..+.    +.|+++++||||.++++.
T Consensus       226 ~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~  257 (576)
T PLN03209        226 GVLCWKRKAEEALI----ASGLPYTIVRPGGMERPT  257 (576)
T ss_pred             HHHHHHHHHHHHHH----HcCCCEEEEECCeecCCc
Confidence            67778888888774    369999999999998764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.78  E-value=3.3e-18  Score=152.43  Aligned_cols=163  Identities=17%  Similarity=0.141  Sum_probs=122.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      ++++++||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.+..            +.++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999988754322111110 01245788899987641            2468


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||.......    ...+...+++|+.++.++++++.    +.+. ++|++||...+..                
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~----------------  145 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG----------------  145 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC----------------
Confidence            999999986433222    12346689999999999988774    3444 8999999877632                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|++.+.+++.++.+.   ++++++++||.++++.
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       146 SSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence            2234579999999999999988774   8999999999999874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.1e-18  Score=155.48  Aligned_cols=163  Identities=17%  Similarity=0.096  Sum_probs=121.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccchh-----------ccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPI-----------LLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~-----------~~~  180 (335)
                      ++++++||||+|+||+++++.|+++|++|++++|+.+.......   ......++.++.+|+.++.           +..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999987543322111   1111246888899987752           246


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||........    +++.+.+++|+.++.++++.+    ++.+. ++|++||...+                .
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~----------------~  145 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR----------------V  145 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc----------------C
Confidence            89999999865443222    245677899999999998885    44444 89999986433                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|...+.+++.++.+   .|++++++|||.++++.
T Consensus       146 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        146 GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence            2233467999999999999988743   58999999999998873

>PRK06182 short chain dehydrogenase; Validated

Probab=99.78  E-value=3.3e-18  Score=154.81  Aligned_cols=158  Identities=14%  Similarity=0.071  Sum_probs=118.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      ++++++||||+|+||++++++|+++|++|++++|+.+...+ +    ....+.++.+|+.++.            ..++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-L----ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            46799999999999999999999999999999987543221 1    1124678888987751            23799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHH----HHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLG----LAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~----~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||.......    .+++...+++|+.++..+++    .+++.+. ++|++||...+.                +.
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------~~  140 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------------YT  140 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------------CC
Confidence            99999997543322    23567889999999665555    4555554 899999965421                12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       141 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        141 PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence            22357999999999998887754   48999999999998874

>PRK08264 short chain dehydrogenase; Validated

Probab=99.78  E-value=2.3e-17  Score=146.12  Aligned_cols=158  Identities=19%  Similarity=0.144  Sum_probs=121.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQI  184 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~V  184 (335)
                      .++++|+||||+|+||++++++|+++|+ +|++++|+.....+      ....+.++.+|+.+.        ....+|+|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            4567999999999999999999999999 99999987543322      224677888888764        22358999


Q ss_pred             EEccCCCC-CCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPAS-PVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||+||... ...    ..+++...+++|+.++.++++++.+    .+. ++|++||...+.                +..
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----------------~~~  141 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----------------NFP  141 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----------------CCC
Confidence            99998722 211    2234667899999999999998653    333 799999976652                233


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+.+.++.+.   +++++++|||.+.++.
T Consensus       142 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        142 NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            44679999999999999988764   8999999999997763

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=149.32  Aligned_cols=158  Identities=16%  Similarity=0.115  Sum_probs=122.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+...       ......+.++.+|+.++.            +..
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999986543       012245778888887651            246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c-C-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V-G-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+.+...+++|+.++.++++++.+    . + .++|++||...+                
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~----------------  139 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR----------------  139 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC----------------
Confidence            8999999986433221    224678899999999999998754    1 2 489999997654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++.++  .++++.++||.+..+.
T Consensus       140 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        140 RPSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence            233344679999999999999998874  3899999999997763

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.78  E-value=3.5e-18  Score=152.86  Aligned_cols=163  Identities=12%  Similarity=0.083  Sum_probs=122.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|............ ...++.++.+|+.++            .+..
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999887532111111111 124577888998775            1356


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|++|||||.......    .+++...+++|+.++..+++++.+    .+  .++|++||...+.               
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~---------------  148 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ---------------  148 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC---------------
Confidence            9999999997543322    245778999999999998887643    22  4899999976652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++.+   .|++++.++||.+-.+
T Consensus       149 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~  192 (251)
T PRK12481        149 -GGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD  192 (251)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence             1222357999999999999998876   4899999999998665

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.4e-18  Score=152.25  Aligned_cols=163  Identities=14%  Similarity=0.023  Sum_probs=123.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.....+...+..   ...++.++.+|+.++.            +
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999987543322211111   2345778899987651            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||......    ..+++...+++|+.++.++++++.+    .+ .++|++||...+.              
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  150 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK--------------  150 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc--------------
Confidence            46999999999643222    2235778899999999999988753    33 3899999975542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|++.+.+++.++.+.   |++++.++||.+-.+
T Consensus       151 --~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~  194 (260)
T PRK07063        151 --IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ  194 (260)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence              22334579999999999999998774   799999999998665

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.78  E-value=1e-17  Score=149.60  Aligned_cols=157  Identities=17%  Similarity=0.114  Sum_probs=122.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.      ..  .....+..+.+|+.++            .+..
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999864      11  1134577888888764            1245


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.++.++++++..    .+ .++|++||....                .
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~----------------~  140 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH----------------V  140 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc----------------c
Confidence            8999999986543222    235677899999999999998753    23 379999986543                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|...+.+++.++.+   .++++++++||.++++.
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  185 (252)
T PRK08220        141 PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM  185 (252)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence            3334578999999999999999877   68999999999999985

>PRK08643 acetoin reductase; Validated

Probab=99.78  E-value=6.6e-18  Score=151.26  Aligned_cols=162  Identities=17%  Similarity=0.127  Sum_probs=119.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+............ ....+.++.+|+.++.            +.++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999987543222111110 1245678889997751            24699


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||.......    .+++...+++|+.++..+++.+.+    .+  .++|++||...+.                +
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  145 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV----------------G  145 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc----------------C
Confidence            99999986433222    224567899999999888777653    22  4899999865431                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|...+.+++.++.+   .|++++.++||.+.++.
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        146 NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence            123467999999999999998875   48999999999998764

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.7e-18  Score=152.15  Aligned_cols=163  Identities=21%  Similarity=0.197  Sum_probs=120.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .+++++|||||+|+||++++++|+++|++|++++|+.+.... +.......++.++.+|+.++.            +.++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAA-TAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            466899999999999999999999999999999987543221 111122225678888887652            2479


Q ss_pred             CEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH----cCC--eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          182 DQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA--KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       182 D~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~--r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      |+|||+||......     ..+++.+.+++|+.++.++++++.+    .+.  +++++||....                
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~----------------  151 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR----------------  151 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc----------------
Confidence            99999998652221     1234678899999999999987733    332  57777764332                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|...|.+++.++.+.   +++++++|||+++|+.
T Consensus       152 ~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~  197 (264)
T PRK12829        152 LGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR  197 (264)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence            122233579999999999999988764   8999999999999985

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.78  E-value=5.4e-18  Score=153.79  Aligned_cols=165  Identities=16%  Similarity=0.152  Sum_probs=123.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++++++||||+|+||++++++|+++|++|++++|+............ ...++..+.+|+.++.            +.
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999987543221111111 1235778889987651            34


Q ss_pred             CCCEEEEccCCCCCCCc-------------------cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccC
Q 019794          180 EVDQIYHLACPASPVHY-------------------KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYG  235 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~-------------------~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~  235 (335)
                      .+|+||||||...+...                   .+++...+++|+.++..+++++.    +.+ .++|++||...+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            79999999986433211                   23467789999999987776543    333 4899999987662


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       236 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                      +......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       167 ----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~  211 (278)
T PRK08277        167 ----------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ  211 (278)
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence                            33345679999999999999998875   7999999999998874

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.5e-18  Score=151.57  Aligned_cols=166  Identities=15%  Similarity=0.121  Sum_probs=120.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++++++||||+|+||++++++|+++|++|++++|+.....+.+...+  ....+..+.+|+.++.            +.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999886432222111111  1235678888987752            13


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      ++|+|||+||...  ....++...+++|+.++.++++++.+.   +.++|++||........    .+       +....
T Consensus        84 ~~d~vi~~ag~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~-------~~~~~  150 (248)
T PRK07806         84 GLDALVLNASGGM--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VK-------TMPEY  150 (248)
T ss_pred             CCcEEEECCCCCC--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----cc-------CCccc
Confidence            6999999998532  222346678899999999999999864   24899999854321110    01       11124


Q ss_pred             ChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          257 SCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ..|+.+|++.|.+++.++.+   .++++++++|+.+-++
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~  189 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGT  189 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence            68999999999999998865   4899999999877665

>PRK08589 short chain dehydrogenase; Validated

Probab=99.77  E-value=6.3e-18  Score=153.02  Aligned_cols=162  Identities=16%  Similarity=0.105  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+ ....+...... ...++..+.+|+.++            .+..
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999987 32221111110 123578888998765            2346


Q ss_pred             CCEEEEccCCCCCC-Cc----cCChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPV-HY----KYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||..... ..    .+.+...+++|+.++..+++++.    +.+.++|++||...+.                
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA----------------  146 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC----------------
Confidence            89999999975321 11    12456788999999988877754    3345899999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|++.+.+++.++.+.   |++++.+.||.|..+
T Consensus       147 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  190 (272)
T PRK08589        147 ADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP  190 (272)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence            22234679999999999999998764   799999999998765

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.6e-18  Score=150.21  Aligned_cols=168  Identities=16%  Similarity=0.064  Sum_probs=123.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~  177 (335)
                      .+.++|+++||||+|+||++++++|+++|++|++++|+.....+.....+  ...++..+.+|+.++            .
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34678899999999999999999999999999999986532212111111  123567888898765            2


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+||||||.......    .+++...+++|+.++..+++++.    +.+ .++|++||...+..            
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  151 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIV------------  151 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCC------------
Confidence            3568999999997543221    23567889999999988877753    333 38999998654321            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       152 --~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~  197 (254)
T PRK06114        152 --NRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM  197 (254)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence              11112357999999999999999876   38999999999998864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.77  E-value=6.6e-18  Score=149.37  Aligned_cols=164  Identities=15%  Similarity=0.115  Sum_probs=129.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++++++|||||++||.+++++|+++|++|+++.|+.+...+...+..  ....++++.+|+.++.            ..
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999999998665443322221  2356889999997751            12


Q ss_pred             CCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|++|||||......+.+    +..+++++|+.+...+..+..    +.+. .+|+++|...|                
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~----------------  147 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL----------------  147 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc----------------
Confidence            5999999999876654433    456799999999888877653    3343 89999998776                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .|.+....|+.||+..-.+.+.+..|.   |+++..+.||.+....
T Consensus       148 ~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f  193 (265)
T COG0300         148 IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF  193 (265)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc
Confidence            455666889999999999888888774   8999999999987654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.6e-18  Score=153.02  Aligned_cols=164  Identities=18%  Similarity=0.084  Sum_probs=122.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc---cCCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+++||||+|+||+++++.|+++|++|++++|+...........   ....++.++.+|+.++.            +
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999998754322111111   01246778888987651            2


Q ss_pred             cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|+|||+||......     ..+++...+++|+.++.++++++.+.    + .+|+++||...+.             
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  151 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-------------  151 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-------------
Confidence            36899999998542211     12246678999999999999876542    2 3899999977652             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +....+.|+.+|++.|.+++.++++.   ++++++++||.+.++.
T Consensus       152 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~  196 (276)
T PRK05875        152 ---THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL  196 (276)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence               22334789999999999999998764   6999999999987764

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=149.82  Aligned_cols=160  Identities=14%  Similarity=0.092  Sum_probs=118.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD~  183 (335)
                      +++++||||+|+||++++++|+++|++|++++|+........ ..+....++.+.+|+.+..            +.++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFA-DALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            568999999999999999999999999999998754332211 1122346788889887651            235899


Q ss_pred             EEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||++|........    +.+...+++|+.++.++++++.    +.+. ++|++||...+..                 .
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~  143 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-----------------L  143 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-----------------C
Confidence            99999864432221    2345567899999999998873    3343 7999998644311                 0


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~  185 (257)
T PRK07074        144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA  185 (257)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence            12369999999999999998764   7999999999998875

>PRK09186 flagellin modification protein A; Provisional

Probab=99.77  E-value=1.2e-17  Score=149.56  Aligned_cols=173  Identities=16%  Similarity=0.155  Sum_probs=119.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.....+...   .......+.++.+|+.++.            +
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999887543322111   1112234667788987651            2


Q ss_pred             cCCCEEEEccCCCCCC---C----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASPV---H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~---~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ..+|+|||||+.....   .    ..+.+...+++|+.++..+++++.+    .+. ++|++||...+...... ..+. 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~~~-  159 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE-IYEG-  159 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch-hccc-
Confidence            3489999999743211   1    1123567889999998877776543    344 89999996554322111 1111 


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|...+.+.+.++.+   .++++++++||.++++
T Consensus       160 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~  204 (256)
T PRK09186        160 ----TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN  204 (256)
T ss_pred             ----cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence                12222346999999999999988876   4799999999988765

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.9e-18  Score=149.87  Aligned_cols=164  Identities=15%  Similarity=0.090  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCcccccccc-CCCceEEEeccccchh-----c--------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI-----L--------  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-----~--------  178 (335)
                      .++++|+||||+|+||++++++|+++|++|+++ .|+.....+...... ....+.++.+|+.++.     +        
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            456799999999999999999999999998775 454322111111111 1245778899997752     1        


Q ss_pred             -----cCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHc--C-CeEEEEecccccCCCCCCCCCCCc
Q 019794          179 -----LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV--G-AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 -----~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~--~-~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                           .++|+|||+||........+    .+...+++|+.++.++++++.+.  . .++|++||..++.           
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----------  152 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----------  152 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----------
Confidence                 26999999998654433222    34667889999999999988753  2 3899999987763           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.+|.+.+.+++.++.+   .++++++++||.++++-
T Consensus       153 -----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  197 (254)
T PRK12746        153 -----GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI  197 (254)
T ss_pred             -----CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence                 2334467999999999999988875   47999999999998874

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.3e-18  Score=149.75  Aligned_cols=159  Identities=14%  Similarity=0.127  Sum_probs=118.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c----cCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L----LEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~----~~vD~Vih  186 (335)
                      +++++||||+|+||.+++++|+++|++|++++|+.+...+ +...  ..++.++.+|+.+..     +    ..+|.+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            4689999999999999999999999999999997543221 1111  235678888887652     1    23789999


Q ss_pred             ccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          187 LACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       187 ~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      |||......    ..+++.+.+++|+.++.++++++...   +.++|++||....                .+......|
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~----------------~~~~~~~~Y  141 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE----------------LALPRAEAY  141 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc----------------cCCCCCchh
Confidence            998532222    12235678999999999999998763   4579999885432                122334579


Q ss_pred             HHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          260 DEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +.+|...+.+.+.++.+   .|+++++++||.++++.
T Consensus       142 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~  178 (240)
T PRK06101        142 GASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL  178 (240)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence            99999999999988754   48999999999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=152.81  Aligned_cols=165  Identities=18%  Similarity=0.162  Sum_probs=125.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|++|||||+|+||.+++++|+++|++|++++|+.....+.....+  ...++.++.+|+.+..            +
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999887533222221111  1235778889987641            2


Q ss_pred             cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|+||||||......     ..+++...+++|+.++.++++++.+.   +.++|++||...|..              
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~--------------  188 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG--------------  188 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC--------------
Confidence            46899999998643221     12345778999999999999998653   348999999877632              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        ......|+.+|.+.+.+++.++.+.   |++++.++||.++.+.
T Consensus       189 --~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~  232 (290)
T PRK06701        189 --NETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL  232 (290)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence              1223569999999999999999874   8999999999998874

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.1e-18  Score=150.62  Aligned_cols=162  Identities=20%  Similarity=0.208  Sum_probs=117.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++++||||+|+||++++++|+++|++|++..+............+  ....+.++.+|+.+..            +..+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999998877654322111111111  1235678888987651            2468


Q ss_pred             CEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccc-cCCCCCCCCCCCcC
Q 019794          182 DQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEV-YGDPLEHPQKETYW  247 (335)
Q Consensus       182 D~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v-~~~~~~~~~~E~~~  247 (335)
                      |+|||+||......     ..+++...+++|+.++.++++++.+.        +.++|++||... ++..          
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  151 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP----------  151 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC----------
Confidence            99999998754322     12245678999999999998887542        126999999644 3211          


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            .....|+.+|++.+.+++.++.+.   |++++++|||.++|+.
T Consensus       152 ------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~  194 (248)
T PRK06123        152 ------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI  194 (248)
T ss_pred             ------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence                  111359999999999999998774   8999999999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.3e-17  Score=149.43  Aligned_cols=161  Identities=17%  Similarity=0.085  Sum_probs=118.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|+++.+......+.+.    ...+.++.+|+.++.            +.+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999999988765332222121    124678888987751            346


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.++..+++.+    ++.+ .++|++||...++.               
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------------  144 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT---------------  144 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC---------------
Confidence            999999998643222    12346788999999977665554    3333 48999999776531               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|++.+.+++.++.+   .|+++++++||.+-.+
T Consensus       145 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~  188 (255)
T PRK06463        145 AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETD  188 (255)
T ss_pred             CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCc
Confidence            1123357999999999999999876   3899999999988554

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.5e-18  Score=151.17  Aligned_cols=164  Identities=13%  Similarity=0.067  Sum_probs=122.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh-----------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI-----------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----------~~  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+...........  ....++.++.+|+.++.           +.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            457889999999999999999999999999999998754322211111  11245778889987751           24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|++|||||.......    .+++...+++|+.+...+++.+.    +.+ .++|++||...+                
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~----------------  148 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK----------------  148 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc----------------
Confidence            69999999986443322    24577889999999887776653    334 489999997654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|.+.+.+++.++.+.   |++++.+.||.|..+
T Consensus       149 ~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (263)
T PRK08339        149 EPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD  193 (263)
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence            222334579999999999999998874   799999999999665

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.77  E-value=7.5e-18  Score=155.12  Aligned_cols=178  Identities=14%  Similarity=0.078  Sum_probs=122.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc---ccccCCCceEEEeccccchh------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL---VHHFRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~------------  177 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+.....+..   ........+.++.+|+.+..            
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            457789999999999999999999999999999998754322111   11112346788899987652            


Q ss_pred             ccCCCEEEEccCCCCCCC--ccCChhhHHhhHHHHHH----HHHHHHHHcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          178 LLEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTL----NMLGLAKRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~--~~~~~~~~~~~Nv~gt~----~ll~~a~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +.++|+||||||......  ..+.+...+++|+.|+.    .+++.+++.+ .++|++||...+.... ...++..|.  
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~~--  169 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQWE--  169 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCcc--
Confidence            246999999999654332  23456778999999955    4555555554 4999999976432111 111111111  


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEE--EeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIA--RIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~iv--Rp~~v~Gp~  293 (335)
                      .+..+...|+.+|++.+.+.+.++.+.   +++++++  .||.|..+.
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            233455789999999999999988764   6666554  699887653

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=148.41  Aligned_cols=162  Identities=18%  Similarity=0.142  Sum_probs=122.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQ  183 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~  183 (335)
                      ...++++++||||+|+||+++++.|+++|++|++++|+.+...+ +..   .....++.+|+.+..        ...+|+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR-LAG---ETGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH---HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            34567899999999999999999999999999999986532221 111   123456777876642        235899


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |||+||.......    .+++.+.+++|+.++.++++++.+.    +  .+||++||...+.                +.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  144 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV----------------GL  144 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC----------------CC
Confidence            9999986443221    2346677889999999999987653    2  4899999976552                22


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.++|.+++.++.+   .+++++.++||.++++.
T Consensus       145 ~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~  187 (245)
T PRK07060        145 PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM  187 (245)
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence            33467999999999999999876   38999999999999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.5e-17  Score=149.27  Aligned_cols=164  Identities=15%  Similarity=0.057  Sum_probs=119.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ...+|++|||||+|+||++++++|++.|++|+++++......+......  ....+.++.+|+.+..            +
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999888764322222111111  1345778899987641            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||......    ..+.+...+++|+.++.++++++...    + .++|+++|...+.              
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~--------------  151 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN--------------  151 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC--------------
Confidence            45899999998644322    12346778999999999999987653    1 3688887754432              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|.+.|.+++.++++.  ++++++++||.++..
T Consensus       152 --~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~  194 (258)
T PRK09134        152 --LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS  194 (258)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence              22223579999999999999998764  499999999988754

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=149.67  Aligned_cols=163  Identities=12%  Similarity=0.059  Sum_probs=118.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh---------------
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI---------------  177 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~---------------  177 (335)
                      ++|+++||||+|+||.+++++|++.|++|++.++......+.....+  ....+..+.+|+.+..               
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            46899999999999999999999999999887543211111111111  1234556667775531               


Q ss_pred             -c--cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 -L--LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 -~--~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                       .  ..+|+||||||........    +.+...+++|+.++..+++++.+.   ..++|++||...+.            
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  150 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------------  150 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc------------
Confidence             1  2699999999964332222    236778899999999999887653   23899999986542            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          +......|+.+|++.+.+++.++.+.   |++++++.||.|.++.
T Consensus       151 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        151 ----SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence                22334679999999999999998764   8999999999998874

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=150.21  Aligned_cols=161  Identities=18%  Similarity=0.190  Sum_probs=121.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++++++||||+|+||++++++|+++|++|++++|+.....+. .... ..++.++.+|+.++            .+..+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAV-AASL-GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999875432221 1111 23577888998775            13468


Q ss_pred             CEEEEccCCCCCCC---ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          182 DQIYHLACPASPVH---YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       182 D~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |+||||||......   ..+++.+.+++|+.++..+++++..    .+.++|++||...+.                +..
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~~  145 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF----------------AQT  145 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc----------------CCC
Confidence            99999998643222   2335678899999999999987654    234899999965431                222


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ....|+.+|...+.+++.++.+.   |+++++++||.+..+
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~  186 (261)
T PRK08265        146 GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR  186 (261)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence            34579999999999999988764   899999999988765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1e-17  Score=149.58  Aligned_cols=162  Identities=17%  Similarity=0.170  Sum_probs=118.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC-
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE-  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~-  180 (335)
                      .++|+++||||+|+||+++++.|+++|++|+++.+......+.+..... .++.++.+|+.++.            +.. 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4567999999999999999999999999998876543222122222221 46778888886641            233 


Q ss_pred             CCEEEEccCCCCC------CC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCC
Q 019794          181 VDQIYHLACPASP------VH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       181 vD~Vih~A~~~~~------~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +|+|||+||....      ..    ..+++.+.+++|+.++.++++++..    .+ .++|++||....           
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------  150 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------  150 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------
Confidence            9999999985311      01    1224567899999999999998853    33 389999985432           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                           .+..+...|+.+|.+.+.+++.++++.   |++++.++||.+..+
T Consensus       151 -----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~  195 (253)
T PRK08642        151 -----NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT  195 (253)
T ss_pred             -----CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence                 233345689999999999999998873   799999999998765

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.5e-17  Score=153.58  Aligned_cols=175  Identities=15%  Similarity=0.071  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.+...+...   .......+.++.+|+.+.            .
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999997553322211   111234678889998764            1


Q ss_pred             ccCCCEEEEccCCCCCCC---ccCChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCC-CCCCCCCCCcCCC
Q 019794          178 LLEVDQIYHLACPASPVH---YKYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGD-PLEHPQKETYWGN  249 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~-~~~~~~~E~~~~~  249 (335)
                      ...+|+||||||......   ..+.++..+++|+.|+..+.+.+.    +...++|++||...+.. .......+.    
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~----  166 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE----  166 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc----
Confidence            245999999999754322   234677889999999988877764    33358999999654321 111111111    


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp  292 (335)
                       .+..+...|+.||.+.+.+.+.++.+     .|++++.+.||.|..+
T Consensus       167 -~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        167 -RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             -ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence             23345578999999999999998763     3799999999998765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-17  Score=149.06  Aligned_cols=164  Identities=14%  Similarity=0.019  Sum_probs=122.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|++|||||+|+||++++++|+++|++|++++|+.........+.. ....+..+.+|+.++.            +..
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999987543222111110 1235677888887651            245


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||+||......    ..+++...+++|+.++.++++.+.+    .+ .++|++||....                .
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----------------~  150 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE----------------L  150 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc----------------c
Confidence            899999998643322    1235678999999999999887654    23 489999986432                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.+..+.
T Consensus       151 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~  195 (254)
T PRK08085        151 GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM  195 (254)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence            22334679999999999999998764   8999999999998874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.7e-17  Score=152.19  Aligned_cols=164  Identities=18%  Similarity=0.115  Sum_probs=123.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.....+..........+..+.+|+.+.            .+..
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4578899999999999999999999999999999987543222111111123455666888765            1356


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|+||||||.......    .+++.+.+++|+.|+.++++++..    .+.+||++||...+.                +
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~  149 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA----------------A  149 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC----------------C
Confidence            9999999997543322    224577899999999999998754    234899999976652                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|...+.+++.++.+   .|++++++.||.+..+
T Consensus       150 ~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  192 (296)
T PRK05872        150 APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD  192 (296)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence            334468999999999999998765   4899999999998765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.9e-17  Score=147.62  Aligned_cols=162  Identities=15%  Similarity=0.055  Sum_probs=119.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++++||||+|+||++++++|+++|++|+++ .|+..... ......  ....+.++.+|+.++.            +.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE-ETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999998764 55432211 111111  1346788889987762            23


Q ss_pred             CCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+|||+||........+    .+...+++|+.++.++++++.+    .+. +||++||...+                
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----------------  145 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI----------------  145 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc----------------
Confidence            6899999998644332222    3455788999999999988764    233 89999996554                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+..+...|+.+|.+.|.+++.++.+   .++++++++||.+..+.
T Consensus       146 ~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~  191 (250)
T PRK08063        146 RYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA  191 (250)
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence            23334468999999999999998876   48999999999998764

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.76  E-value=7.7e-18  Score=146.61  Aligned_cols=191  Identities=19%  Similarity=0.232  Sum_probs=153.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ..+|-++-|+|||||+|++++.+|.+.|.+|++-.|..+.....++-..+..++-+...|+.|+     .....++|||+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            3567789999999999999999999999999999997655444444444556778888888876     45678999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      .|-    +++.....+.++|+.+...+++.|++.|+ |||++|+..+                  .....+-|-.+|++.
T Consensus       138 IGr----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga------------------nv~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  138 IGR----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA------------------NVKSPSRMLRSKAAG  195 (391)
T ss_pred             ecc----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc------------------cccChHHHHHhhhhh
Confidence            973    33444556778999999999999999999 9999998652                  123346799999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCc-eeeceeccccc
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQ-TRSFQYVSDLV  334 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~-~~~~v~v~Dva  334 (335)
                      |..+++..    -+.+|+||+.+||.-     .+++..+.....+-+.+++++.|+. ....|||-|||
T Consensus       196 E~aVrdaf----PeAtIirPa~iyG~e-----Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVa  255 (391)
T KOG2865|consen  196 EEAVRDAF----PEATIIRPADIYGTE-----DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVA  255 (391)
T ss_pred             HHHHHhhC----Ccceeechhhhcccc-----hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHH
Confidence            99998743    468999999999974     6788888777777888999888855 56789999987

>PRK12743 oxidoreductase; Provisional

Probab=99.76  E-value=1.4e-17  Score=149.31  Aligned_cols=163  Identities=16%  Similarity=0.112  Sum_probs=121.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++++|+||||+|+||.+++++|+++|++|+++.+......+......  ....+.++.+|+.+.            .+..
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999999888764332221111111  124678889998775            1246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+|||+||.......    .+++...+++|+.++.++++++...      +.++|++||....                
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------------  144 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------------  144 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc----------------
Confidence            8999999986543222    2356788999999999999877542      2489999986432                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+..+...|+.+|.+.+.+++.++.+.   +++++.++||.++++.
T Consensus       145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~  190 (256)
T PRK12743        145 TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM  190 (256)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence            233445689999999999999988753   7999999999999874

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.4e-17  Score=149.20  Aligned_cols=165  Identities=12%  Similarity=0.060  Sum_probs=123.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+.+......... ....++.++.+|+.+.            .+.
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            356789999999999999999999999999999998754322111110 0123577888888664            124


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-------------CCeEEEEecccccCCCCCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-------------GAKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-------------~~r~v~iSS~~v~~~~~~~~~  242 (335)
                      .+|+|||+||.......    .+++...+++|+.++.++++++...             +.++|++||...+.       
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  158 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-------  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-------
Confidence            68999999986443222    2356778999999999999876531             23799999876542       


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                               +......|+.+|.+.+.+++.++.+   .++++++++||.|+++.
T Consensus       159 ---------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~  203 (258)
T PRK06949        159 ---------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI  203 (258)
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence                     2334467999999999999998876   38999999999999875

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.6e-17  Score=150.29  Aligned_cols=160  Identities=19%  Similarity=0.098  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++|+||||+|+||++++++|+++|++|++++|+.+...... ...  ..+.++.+|+.++.            ..++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETA-AEL--GLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh--ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45689999999999999999999999999999988654322211 111  14677888887651            3568


Q ss_pred             CEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |++|||||........    +.+...+++|+.|+.++++.+.    +.+. ++|++||...+                .+
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------~~  143 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK----------------IP  143 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc----------------CC
Confidence            9999999975433322    2456789999999999887764    3444 89999997654                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|...+.+.+.++.+   .|+++++++||.+..+
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~  186 (273)
T PRK07825        144 VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTE  186 (273)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcch
Confidence            334567999999999888887765   3899999999998654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.76  E-value=1.8e-17  Score=148.72  Aligned_cols=163  Identities=13%  Similarity=0.122  Sum_probs=122.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++++||||||+|+||.+++++|++.|++|++++|+. . .+.+.+..  ....+.++.+|+.+..            +
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-N-WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-H-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45778999999999999999999999999999998862 1 11111111  1245788899987651            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|++||+||.......    .++++..+++|+.++..+++++.+    .+ .++|++||...+.              
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  155 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ--------------  155 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc--------------
Confidence            468999999986543222    225677899999999888877643    33 3899999976652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++++.   |+++++++||.+..+.
T Consensus       156 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        156 --GGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence              22233579999999999999998864   8999999999997764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.76  E-value=3.2e-17  Score=147.74  Aligned_cols=154  Identities=18%  Similarity=0.175  Sum_probs=119.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++++.....        ...+.++.+|+.++.            +..
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            456789999999999999999999999999999988654321        235678888887751            246


Q ss_pred             CCEEEEccCCCCCCC-------------ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCC
Q 019794          181 VDQIYHLACPASPVH-------------YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~  242 (335)
                      +|+||||||......             ..+++...+++|+.++..+++++.+.    + .++|++||...+.       
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------  150 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE-------  150 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC-------
Confidence            899999999643211             12346678999999999999887642    2 3799999976542       


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCcee
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTY  290 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~  290 (335)
                               +......|+.+|.+.+.+++.++.+.   |+++++++||.+.
T Consensus       151 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        151 ---------GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                     22334679999999999999998764   8999999999885

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.76  E-value=1.7e-17  Score=148.02  Aligned_cols=159  Identities=16%  Similarity=0.144  Sum_probs=118.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~V  184 (335)
                      |+|+||||+|+||.+++++|+++|++|++++|+...... +.... ...+.++.+|+.+.            .+.++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986543221 11111 23577888888765            12479999


Q ss_pred             EEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||+||......     ..+++..++++|+.++.++++.+.    +.+. ++|++||...+                .+..
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----------------~~~~  142 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS----------------WPYA  142 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC----------------CCCC
Confidence            99998642111     223567789999999777776653    4444 89999996543                2233


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|...+.+.+.++.+.   ++++++++||.+.|+.
T Consensus       143 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            44679999999999999988764   7999999999998653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.76  E-value=1.6e-17  Score=149.45  Aligned_cols=162  Identities=19%  Similarity=0.149  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++++++||||+|+||++++++|+++|++|++++|+.....+ +... ....+..+.+|+.+.            .+..+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999986532221 1111 123577788888764            12568


Q ss_pred             CEEEEccCCCCCC-C---cc-----CChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          182 DQIYHLACPASPV-H---YK-----YNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       182 D~Vih~A~~~~~~-~---~~-----~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      |++|||||..... .   ..     +++.+.+++|+.++.++++++.+.    +.++|++||...+              
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~--------------  146 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF--------------  146 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee--------------
Confidence            9999999864211 1   11     246788999999999999988653    2378888886543              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+++.++.+.  .++++.+.||.+..+-
T Consensus       147 --~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       147 --YPNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             --cCCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence              122334579999999999999999875  4899999999997663

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.1e-17  Score=147.94  Aligned_cols=164  Identities=15%  Similarity=0.049  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|+++||||+|+||.+++++|++.|++|++++|+.....+...+.. ...++.++.+|+.++.            +..
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999987543222111110 1235778888887651            346


Q ss_pred             CCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||..... .    ..+++...+++|+.++..+++++.    +.+ .++|++||...+..              
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~--------------  149 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA--------------  149 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc--------------
Confidence            99999999964321 1    123467889999999888866543    333 38999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.+-.+
T Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  193 (254)
T PRK07478        150 -GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP  193 (254)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence             22334679999999999999998874   799999999999766

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=3.9e-17  Score=144.35  Aligned_cols=156  Identities=14%  Similarity=0.093  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~  187 (335)
                      .++|+++||||+|+||+++++.|+++|++|++++|+.....        ..++..+.+|+.++      .+..+|+|||+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            56789999999999999999999999999999988643211        23577888888665      24579999999


Q ss_pred             cCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          188 ACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       188 A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ||.... ..    ..+++...+++|+.++.++++++..    .+ .++|++||...+.                +.....
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~  138 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV----------------AGGGGA  138 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc----------------CCCCCc
Confidence            985321 11    1235677899999999999998753    22 3799999975542                222335


Q ss_pred             hHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          258 CYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .|+.+|...+.+++.++.+.   |+++++++||.+.++.
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~  177 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPM  177 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence            79999999999999988765   8999999999998874

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.2e-17  Score=148.34  Aligned_cols=159  Identities=20%  Similarity=0.105  Sum_probs=120.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-------------ccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------------LLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~vD  182 (335)
                      ||+++||||+|+||++++++|+++|++|++++|+.....+ +........+.++.+|+.+..             ..++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            4789999999999999999999999999999986543222 111122346788889987641             34689


Q ss_pred             EEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccc-cCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEV-YGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v-~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||........    +++...+++|+.++.++++++.+    .+ .++|++||... ++                 
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------------  142 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG-----------------  142 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC-----------------
Confidence            999999975433322    34677899999999999988753    33 48999998643 32                 


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|+..+.+++.++.+   .++++++++||.+..+
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~  185 (260)
T PRK08267        143 QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA  185 (260)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence            122357999999999999998765   3799999999998664

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.1e-17  Score=148.81  Aligned_cols=163  Identities=13%  Similarity=0.049  Sum_probs=122.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++++||||+|+||.++++.|+++|++|++++|+.+...+...... ...++.++.+|+.++.            +.+
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999997543222111110 1245778889987752            247


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR-----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~-----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+|||+||........    +++...+++|+.++.++++++.+     .+ .++|++||....                
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~----------------  151 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR----------------  151 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc----------------
Confidence            99999999864332222    34678899999999999999864     23 389999986432                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                      .+..+...|+.+|.+.+.+++.++.+.  +++++.++||.+..+
T Consensus       152 ~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~  195 (263)
T PRK07814        152 LAGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS  195 (263)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence            123345679999999999999998764  589999999998655

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.75  E-value=1.9e-17  Score=148.29  Aligned_cols=165  Identities=15%  Similarity=0.099  Sum_probs=122.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+............ ...++.++.+|+.+..            +.
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3568899999999999999999999999999999886443221111110 1235677888887651            24


Q ss_pred             CCCEEEEccCCCCCCCcc---CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHYK---YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|+|||+||.......+   +++...+++|+.++.++++++..    .+ .++|++||....                .
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----------------~  151 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE----------------N  151 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc----------------C
Confidence            689999999965433222   34566799999999999998853    23 389999996543                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.+   .+++++++.||.+..+.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence            2334467999999999999998865   47999999999987653

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.2e-17  Score=146.70  Aligned_cols=163  Identities=18%  Similarity=0.126  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +.++++|+||||+|+||.+++++|+++|++|++++|+....  ..........+..+.+|+.++.            +.+
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA--EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999999865421  1111122345668888887651            246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.++.++++++...    + .+||++||....                .
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----------------~  153 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV----------------V  153 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc----------------c
Confidence            8999999996543222    2245678999999999999987642    3 489999996543                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |++++.++||.+..+.
T Consensus       154 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  198 (255)
T PRK06841        154 ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL  198 (255)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence            22233579999999999999998773   8999999999997764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=2.6e-17  Score=145.89  Aligned_cols=164  Identities=15%  Similarity=0.043  Sum_probs=121.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35679999999999999999999999999999999754322211111 11236778889987652            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||+||.......    .+++.+.+++|+.++.++++++..    .+ .++|++||...+.                
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  148 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK----------------  148 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc----------------
Confidence            9999999986543222    234567899999999999988753    33 3799999865542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       149 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  193 (239)
T PRK07666        149 GAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM  193 (239)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence            2233457999999999999888765   48999999999998763

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=145.54  Aligned_cols=163  Identities=13%  Similarity=0.055  Sum_probs=120.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      ++++|+||||+|+||++++++|+++|++|++++|++...............+.++.+|+.+..            +.++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999999999999875432221111111146788888887651            24799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---C-CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---G-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +|||+||.......    .+++...+++|+.++.++++++.+.   + .++|++||...+.                +..
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~~~  148 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN----------------FFA  148 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc----------------CCC
Confidence            99999986543222    2235678999999999998887542   2 3799999875442                223


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|++.+.+++.++.+   .|++++++|||.+.++.
T Consensus       149 ~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~  190 (237)
T PRK07326        149 GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF  190 (237)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence            3467999999999999988754   48999999999997763

>PRK12742 oxidoreductase; Provisional

Probab=99.75  E-value=3.1e-17  Score=145.10  Aligned_cols=162  Identities=14%  Similarity=0.134  Sum_probs=118.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~Vi  185 (335)
                      .++|+|+||||+|+||++++++|+++|++|+++.+......+.+...   ..+..+.+|+.+..        ...+|+||
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            45789999999999999999999999999988766422211111111   13456777876541        24589999


Q ss_pred             EccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          186 HLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       186 h~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      |+||.......    .+++...+++|+.++..++..+.+.   +.++|++||.....               .+......
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~~~~~  145 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---------------MPVAGMAA  145 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---------------CCCCCCcc
Confidence            99986533221    2356789999999999998766543   34899999964311               23344567


Q ss_pred             HHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          259 YDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      |+.+|++.+.+++.++.+.   |+++++++||.+..+.
T Consensus       146 Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~  183 (237)
T PRK12742        146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA  183 (237)
T ss_pred             hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence            9999999999999988763   7999999999997763

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.5e-17  Score=145.51  Aligned_cols=163  Identities=18%  Similarity=0.122  Sum_probs=121.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++|+||||||+|+||++++++|+++|++|++++|+.....+.... .....++++.+|+.+.            .+.++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG-VPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH-HhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            4578999999999999999999999999999999975433222211 1223456777887653            13469


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||++|.......    .+.+.+.++.|+.++.++++++.+    .+. ++|++||...+..                
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  147 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA----------------  147 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC----------------
Confidence            999999986432221    223456788999999999988753    344 8999999877632                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+++.++++   .+++++++|||.++++.
T Consensus       148 ~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        148 GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            233467999999999999888765   48999999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.75  E-value=3.2e-17  Score=146.79  Aligned_cols=163  Identities=13%  Similarity=0.057  Sum_probs=121.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-cccccccCCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ..++|+++||||+|+||++++++|++.|++|+++++...... +.+..  ....+..+.+|+.+.            .+.
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA--LGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999998876432110 11111  123567888898764            134


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|++|||||.......    .+++.+.+++|+.++.++++++..    .+  .++|++||...+..             
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  151 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG-------------  151 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC-------------
Confidence            69999999996543221    245788999999999999888643    22  47999999876632             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|++.+.+.+.++.+   .|++++.++||.+..+.
T Consensus       152 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~  195 (253)
T PRK08993        152 ---GIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN  195 (253)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence               122357999999999999999877   48999999999997653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.2e-17  Score=148.49  Aligned_cols=156  Identities=15%  Similarity=0.043  Sum_probs=117.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~  183 (335)
                      ||+++||||+|+||++++++|+++|++|++++|+...... +    ....++.+.+|+.++            ...++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-L----AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999999999999999999986532211 1    112456778888764            1246999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      ||||||.......    .+++...+++|+.|+.++++++..    ...++|++||...+.                +...
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~  139 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL----------------VTPF  139 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC----------------CCCC
Confidence            9999996543322    234677899999999999988743    224799998865431                1223


Q ss_pred             CChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ...|+.+|...+.+++.++.+   .|+++++++||.|..+
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            467999999999999888765   5899999999999765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3e-17  Score=145.85  Aligned_cols=165  Identities=21%  Similarity=0.157  Sum_probs=122.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      ..++++++||||+|+||++++++|+++|++|+++.++.....+...+..  ...++.++.+|+.++            .+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999888775432211111111  124678888998764            13


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      .++|+|||+||......    ..+++...+++|+.++.++++++.+.   +.++|++||...+                .
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~----------------~  145 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA----------------L  145 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc----------------C
Confidence            46999999998644322    12346678999999999999888653   2389999886543                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|...+.+++.++.+.   ++++++++||.+-.+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        146 PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence            23345679999999999999988763   7999999999886653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.75  E-value=3e-17  Score=146.08  Aligned_cols=163  Identities=18%  Similarity=0.100  Sum_probs=116.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++|+++||||+|+||++++++|+++|++|+++.+.............  ....+..+.+|+.+.            .+.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999998886543221111111111  123566778888764            1346


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.++..+++++.    +.+. ++|++||....                .
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~----------------~  145 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ----------------K  145 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc----------------C
Confidence            999999998644322    123567889999999888766653    4454 89999986432                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~  190 (246)
T PRK12938        146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  190 (246)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence            2233467999999999998888765   48999999999998875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.3e-17  Score=147.34  Aligned_cols=163  Identities=15%  Similarity=0.066  Sum_probs=120.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .++++++||||+|+||++++++|+++|++|++++|+... .+..... ....++.++.+|+.++            .+..
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999886431 1111111 1124577888998765            1346


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||+||........    +.+.+.+++|+.++.++++++.+    .+ .++|++||.....               .
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------~  147 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM---------------V  147 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------c
Confidence            89999999965433322    23556799999999999988653    23 3899998864310               1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|...+.+++.++.+.   +++++.++||.+.++
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~  191 (263)
T PRK08226        148 ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP  191 (263)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence            22234579999999999999998764   799999999999886

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=146.35  Aligned_cols=161  Identities=11%  Similarity=0.060  Sum_probs=119.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh---------ccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI---------LLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~---------~~~vD~V  184 (335)
                      ||+|+||||+|+||.+++++|+++|++|++++|+.+.........  ....+++++.+|+.++.         ...+|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            578999999999999999999999999999999764332211111  12346888999987752         2347999


Q ss_pred             EEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          185 YHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       185 ih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      ||++|........    +++...+++|+.++.++++++..    .+ .++|++||.....                +...
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~  144 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR----------------GRAS  144 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC----------------CCCC
Confidence            9999864433221    23456899999999999988754    23 3899999864321                1122


Q ss_pred             CChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ...|+.+|+..+.+.+.++.+   .|+++++++||.++++
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~  184 (243)
T PRK07102        145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP  184 (243)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence            356999999999999998765   3899999999999887

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.4e-17  Score=146.34  Aligned_cols=162  Identities=13%  Similarity=0.072  Sum_probs=121.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ++|+++||||+|+||.+++++|+++|++|++++|+...... +....  ...++.++.+|+.+..            +.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999997543221 11111  1246788899987652            246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||+||.......    .+++...+++|+.++.++++.+.    +.+ .++|++||...+.                
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------  147 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN----------------  147 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc----------------
Confidence            9999999986443221    23467789999999999887763    333 3899999987663                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+   .|++++++|||.+-.+.
T Consensus       148 ~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        148 AFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence            2233467999999999999888755   48999999999987763

>PRK09242 tropinone reductase; Provisional

Probab=99.75  E-value=2.3e-17  Score=147.91  Aligned_cols=165  Identities=11%  Similarity=0.082  Sum_probs=125.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.+.......   ......++..+.+|+.++            .
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999987543221111   111234677888998764            2


Q ss_pred             ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +.++|+|||+||......    ..+++...+++|+.++.++++++.+    .+ .++|++||...+.             
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~-------------  152 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT-------------  152 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC-------------
Confidence            456999999998643221    2335678899999999999888743    33 3899999976552             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|...+.+++.++.+.   +++++.++||.+.++.
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~  197 (257)
T PRK09242        153 ---HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL  197 (257)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence               23344679999999999999988664   8999999999998875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=4.1e-17  Score=147.03  Aligned_cols=165  Identities=12%  Similarity=-0.002  Sum_probs=123.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|+.++            .+.
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4567899999999999999999999999999999886543322111110 123578889999765            124


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+||||||.......    .+++...+++|+.++..+++++..    .+ .+||++||....                
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~----------------  150 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE----------------  150 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc----------------
Confidence            58999999997543322    234677899999999988887643    33 489999985322                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++++.   |++++.++||.+.++.
T Consensus       151 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (265)
T PRK07097        151 LGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ  196 (265)
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence            112234679999999999999998874   8999999999998874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.75  E-value=2.9e-17  Score=147.83  Aligned_cols=161  Identities=18%  Similarity=0.148  Sum_probs=120.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+...... +.... ..++.++.+|+.+.            .+..+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLAS-LRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999986543221 11111 23567788888764            13469


Q ss_pred             CEEEEccCCCCCC-Cc----cC----ChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          182 DQIYHLACPASPV-HY----KY----NPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       182 D~Vih~A~~~~~~-~~----~~----~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      |++|||||..... ..    .+    .+...+++|+.++..+++++.+    .+.++|++||...+.             
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  148 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY-------------  148 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC-------------
Confidence            9999999964321 11    11    2567789999999999888753    334799999976652             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                         +......|+.+|.+.+.+++.++.+.  +++++.+.||.+..+
T Consensus       149 ---~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~  191 (263)
T PRK06200        149 ---PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD  191 (263)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence               22334579999999999999998874  599999999999765

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.2e-17  Score=149.32  Aligned_cols=167  Identities=14%  Similarity=0.082  Sum_probs=122.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (335)
                      ...++++|+||||+|+||.+++++|+++|++|++++|+.+...+...... ....+.++.+|+.+..            +
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34567899999999999999999999999999999997543221111110 1235678889987752            3


Q ss_pred             cCCCEEEEccCCCCCCCcc------CChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~------~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .++|+||||||........      +++...+++|+.|+.++++++.    +.+. ++|++||..++..           
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  184 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-----------  184 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-----------
Confidence            4799999999865433221      2345689999999998888653    4443 8999999765421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          +......|+.+|++.+.+++.++.+.   |+++++++||.+-.+.
T Consensus       185 ----~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~  229 (293)
T PRK05866        185 ----ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM  229 (293)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc
Confidence                11223679999999999999988764   8999999999886553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.75  E-value=5.5e-18  Score=159.79  Aligned_cols=217  Identities=20%  Similarity=0.138  Sum_probs=149.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccc--cccc--------c------CCCceEEEec
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDN--LVHH--------F------RNPRFELIRH  171 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~--~~~~--------~------~~~~~~~~~~  171 (335)
                      ...+++|+|||||||||+|+.++++|++...   +++++.|........  +...        +      ...++..+.+
T Consensus         7 ~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~G   86 (467)
T KOG1221|consen    7 VQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAG   86 (467)
T ss_pred             HHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccc
Confidence            3457889999999999999999999999864   778888865433211  0000        0      1246677888


Q ss_pred             cccch-----------hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCC
Q 019794          172 DVVEP-----------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPL  238 (335)
Q Consensus       172 D~~~~-----------~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~  238 (335)
                      |+.++           ...++|+|||+||   ...+++.......+|..||.++++.|++...  -++++||+.+.  +.
T Consensus        87 Di~~~~LGis~~D~~~l~~eV~ivih~AA---tvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n--~~  161 (467)
T KOG1221|consen   87 DISEPDLGISESDLRTLADEVNIVIHSAA---TVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN--CN  161 (467)
T ss_pred             cccCcccCCChHHHHHHHhcCCEEEEeee---eeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee--cc
Confidence            88665           2356999999995   5667778888999999999999999999875  69999998766  22


Q ss_pred             CCCCCCCcCCCCC------------------------C--CCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          239 EHPQKETYWGNVN------------------------P--IGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       239 ~~~~~E~~~~~~~------------------------~--~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      .....|..+....                        .  ....+.|..+|+.+|.++...+  .+++++|+||+.|...
T Consensus       162 ~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st  239 (467)
T KOG1221|consen  162 VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITST  239 (467)
T ss_pred             cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceecc
Confidence            2222222111000                        0  0124789999999999998854  4899999999999987


Q ss_pred             CCCCCCcchHHH-----HHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          293 RMCLDDGRVVSN-----FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       293 ~~~~~~~~~i~~-----~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      -..+.+++....     ++-..-+|.-..+..|.+...|+|.||.||
T Consensus       240 ~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vv  286 (467)
T KOG1221|consen  240 YKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVV  286 (467)
T ss_pred             ccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHH
Confidence            654443332111     111222333334456778888999998876

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.5e-17  Score=146.01  Aligned_cols=164  Identities=15%  Similarity=0.089  Sum_probs=118.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch--------------h
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP--------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~--------------~  177 (335)
                      +++++++||||+|+||.+++++|+++|++|++++|+...........  .....+..+..|+.+.              .
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999764322111110  1122344555665421              1


Q ss_pred             c-cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCc
Q 019794          178 L-LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~-~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      + ..+|+|||+||......     ..+++...+++|+.|+.++++++.+    .+ .++|++||....            
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------------  151 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE------------  151 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc------------
Confidence            2 56899999998642211     1234566899999999999887744    23 489999985432            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v~Gp~  293 (335)
                          .+......|+.+|++.+.+++.++.+.    ++++++++||.|+++.
T Consensus       152 ----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~  198 (239)
T PRK08703        152 ----TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ  198 (239)
T ss_pred             ----cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence                233334679999999999999998875    5999999999999985

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-17  Score=146.19  Aligned_cols=164  Identities=17%  Similarity=0.100  Sum_probs=119.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~  179 (335)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.........+.. ....+..+.+|+.+.            .+.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999986543222111111 123466788888654            134


Q ss_pred             CCCEEEEccCCCCCC-----CccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPV-----HYKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|+|||+||.....     ...++++..+++|+.++..+++++.    +.+ .++|++||...+               
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~---------------  149 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV---------------  149 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc---------------
Confidence            699999999853211     1123456789999999998887763    333 379999986443               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|++.+.+++.++.+.   |++++.+.||.+..+
T Consensus       150 -~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~  194 (252)
T PRK07035        150 -SPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK  194 (252)
T ss_pred             -CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence             123344679999999999999998764   899999999998664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=6.3e-17  Score=144.93  Aligned_cols=167  Identities=12%  Similarity=0.054  Sum_probs=124.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------h
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~  177 (335)
                      +...++|+++||||+|+||++++++|+++|++|++++|+.+......... .....+.++.+|+.++            .
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            34467899999999999999999999999999999999754322111111 0123578889998765            1


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+|||+||.......    .+++.+.+++|+.++.++++.+.+    .+. ++|++||...+              
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~--------------  151 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQ--------------  151 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhc--------------
Confidence            3458999999996543222    224667899999999999977643    343 89999986543              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+++.++.+.   ++++++++||.+.++.
T Consensus       152 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  197 (256)
T PRK06124        152 --VARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET  197 (256)
T ss_pred             --cCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence              122234679999999999999888763   8999999999999875

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.2e-17  Score=145.99  Aligned_cols=158  Identities=18%  Similarity=0.142  Sum_probs=114.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch-----hc-cCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-----IL-LEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-----~~-~~vD~Vih~  187 (335)
                      +++||||||+|+||++++++|+++|++|++++|+...... +...  .....+.++.+|+.++     .+ .++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            5689999999999999999999999999999986432211 1111  0123577888888775     22 379999999


Q ss_pred             cCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          188 ACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       188 A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      ||.......    .+.++..+++|+.++.++.+.+    ++.+. +||++||...+.                .......
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~----------------~~~~~~~  144 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI----------------TGPFTGA  144 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc----------------CCCCcch
Confidence            996543322    1235678899999988776654    34444 899999965431                1123467


Q ss_pred             HHHHHHHHHHHHHHHHhh---hCCcEEEEEeCcee
Q 019794          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTY  290 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~  290 (335)
                      |+.+|.+.|.+++.++.+   .|++++++|||.+.
T Consensus       145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~  179 (257)
T PRK09291        145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL  179 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence            999999999999887765   58999999999864

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.74  E-value=5.6e-17  Score=143.93  Aligned_cols=162  Identities=17%  Similarity=0.161  Sum_probs=118.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++++++||||+|+||+++++.|+++|++|+++.|+...........+  ....+.++.+|+.+..            +.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999888876542221111111  2346778888887652            24


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEeccc-ccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSE-VYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~-v~~~~~~~~~~E~~~~~  249 (335)
                      ++|+|||+||........    +.+...+++|+.++.++++++...    +. ++|++||.. .++.             
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-------------  149 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-------------  149 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-------------
Confidence            689999999865433221    245677899999999999888653    33 799999853 3321             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                          .....|+.+|.+.+.+++.++++   .++++++++||.+.++
T Consensus       150 ----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~  191 (248)
T PRK05557        150 ----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD  191 (248)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence                22467999999999998887764   3899999999988654

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-17  Score=146.44  Aligned_cols=166  Identities=15%  Similarity=0.031  Sum_probs=121.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .++|+++||||+|+||.+++++|+++|++|++++|+.........+.. ...++..+.+|+.++            .+..
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999987543222111110 124567788898765            1357


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+.+...+++|+.++..+++++..    .+  .++|++||....-.              
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------  152 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--------------  152 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--------------
Confidence            9999999997543322    234667889999999999988743    22  36899988643210              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ........|+.+|++.+.+++.++.+.   |+++++++||.+-.+.
T Consensus       153 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~  198 (253)
T PRK05867        153 NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL  198 (253)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence            001123579999999999999998764   8999999999997664

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.1e-17  Score=145.74  Aligned_cols=164  Identities=15%  Similarity=0.091  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---ccc--CCCceEEEeccccch------------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHF--RNPRFELIRHDVVEP------------  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~--~~~~~~~~~~D~~~~------------  176 (335)
                      .++|+++||||+|+||.++++.|+++|++|+++.+......+...   ..+  ...++.++.+|+.+.            
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999998777765332221111   111  123677889998765            


Q ss_pred             hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          177 ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+.++|+|||+||.......    .+++...+++|+.++..+++++.+.   +.++++++|+....              
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~--------------  151 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA--------------  151 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc--------------
Confidence            12469999999996433222    2246778999999999999988653   23666654332221              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|++.|.+++.++.+.   |+++++++||.+.++.
T Consensus       152 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        152 --FTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             --cCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence              11223679999999999999999875   6999999999997753

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.2e-17  Score=146.78  Aligned_cols=161  Identities=17%  Similarity=0.051  Sum_probs=120.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCCCE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEVDQ  183 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~vD~  183 (335)
                      |+|+||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.++.            +.++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998754322211111 11345778888987641            246999


Q ss_pred             EEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||||||........+    ++...+++|+.++.++++.+    ++.+. ++|++||...+                .+..
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~----------------~~~~  144 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL----------------MQGP  144 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc----------------CCCC
Confidence            999999755433222    45667899999988877764    44554 89999997654                2333


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|++.+.+.+.++.+.   |+++++++||.+.++.
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  186 (270)
T PRK05650        145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL  186 (270)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence            45689999999999999888774   8999999999998764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.1e-16  Score=141.58  Aligned_cols=162  Identities=14%  Similarity=0.118  Sum_probs=116.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCC-Cccccccc--cCCCceEEEeccccchh---------c--c
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTG-RKDNLVHH--FRNPRFELIRHDVVEPI---------L--L  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~-~~~~~~~~--~~~~~~~~~~~D~~~~~---------~--~  179 (335)
                      ++++|+||||+|+||++++++|+++| ++|++++|+.+. ..+...+.  ....++.++.+|+.++.         .  .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            45799999999999999999999995 899999997664 22111111  12236788889987641         1  3


Q ss_pred             CCCEEEEccCCCCCCC-ccCCh---hhHHhhHHHHHHHH----HHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH-YKYNP---VKTIKTNVMGTLNM----LGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-~~~~~---~~~~~~Nv~gt~~l----l~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|++||++|...... ...++   .+.+++|+.++..+    +..+++.+. ++|++||...+.               
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~---------------  151 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER---------------  151 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence            6999999998653321 11122   24689999999875    445555554 899999975431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|++...+.+.++.+   .++++++++||.+..+
T Consensus       152 -~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~  195 (253)
T PRK07904        152 -VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR  195 (253)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence             1122356999999999888877654   4899999999999875

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.74  E-value=6.5e-17  Score=145.35  Aligned_cols=165  Identities=15%  Similarity=0.067  Sum_probs=120.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      .+++|+++||||+|+||.+++++|+++|+.|+++.|+...........+  ...++.++.+|+.+..            +
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999999999888775332211111111  1235667888887652            2


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHH----HHHcC--CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGL----AKRVG--AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~----a~~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|+|||+||........    +.++..+++|+.++..+++.    +.+.+  .++|++||...+              
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~--------------  149 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ--------------  149 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc--------------
Confidence            4689999999965443322    34667899999988766554    34443  489999996443              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+.+.++.+.   |+++++++||.+..+.
T Consensus       150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  195 (261)
T PRK08936        150 --IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_pred             --CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence              234445689999999999988887664   8999999999998774

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6.1e-17  Score=144.73  Aligned_cols=164  Identities=17%  Similarity=0.093  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.+......... ....++..+.+|+.+.            .+..
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999754322111111 0124578888998764            1246


Q ss_pred             CCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+|||+||......     ..+++.+.+++|+.++..+++++.    +.+ .++|++||...+.               
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~---------------  149 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG---------------  149 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc---------------
Confidence            899999998643222     223567789999999988777543    333 3899999976653               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|++.+.+++.++.+.   |++++++.||.|-.+.
T Consensus       150 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~  194 (253)
T PRK06172        150 -AAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM  194 (253)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence             23345679999999999999998775   7999999999986654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.73  E-value=7.2e-17  Score=143.46  Aligned_cols=164  Identities=18%  Similarity=0.109  Sum_probs=115.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCCCcccccccc-CCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      |++++||||+|+||++++++|+++|++|+++. |+.....+...... ....+..+.+|+.++.            ...+
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999998754 43221111111110 1235778889987651            3458


Q ss_pred             CEEEEccCCCCCCCc-----cCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          182 DQIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       182 D~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      |+|||+||.......     .+++...+++|+.++..+++++...        +.+||++||...+...           
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~-----------  149 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA-----------  149 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-----------
Confidence            999999986433221     1235678999999998888765432        2369999997543210           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                         + .....|+.+|...+.+++.++.+   .+++++++|||.+|++..
T Consensus       150 ---~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        150 ---P-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH  194 (247)
T ss_pred             ---C-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence               1 11135999999999999988765   389999999999999853

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.2e-17  Score=143.80  Aligned_cols=163  Identities=15%  Similarity=0.181  Sum_probs=120.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc---ccccCCCceEEEeccccchh------------ccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL---VHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++++||||+|+||++++++|+++|++|++++|+.....+..   ........+.++.+|+.++.            +.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999998754322211   11112346788899997752            346


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+.+...+++|+.++.++++++.    +.+. ++|++||...+..              .
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------~  147 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG--------------L  147 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC--------------C
Confidence            9999999986543322    22346788999999999988764    3343 8999999654311              0


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      + .+...|+.+|++.+.+.+.++.+.   ++++++++||.+.++.
T Consensus       148 ~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  191 (248)
T PRK08251        148 P-GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM  191 (248)
T ss_pred             C-CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence            1 123579999999999998888663   7999999999998763

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.6e-17  Score=145.33  Aligned_cols=164  Identities=17%  Similarity=0.155  Sum_probs=121.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.+.......... ....+.++.+|+.++.            +.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999987543222111110 1234577888887641            24


Q ss_pred             CCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|+||||||......    ..+++...+++|+.++.++++++.+    .+.++|++||...+                .
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~----------------~  149 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAF----------------V  149 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhc----------------c
Confidence            6899999998533222    1224567889999999999988754    23489999996543                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+   .|++++.++||.+.+.
T Consensus       150 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t  193 (264)
T PRK07576        150 PMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT  193 (264)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence            2233467999999999999998876   3799999999998753

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.8e-17  Score=144.90  Aligned_cols=161  Identities=12%  Similarity=0.077  Sum_probs=119.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      +|+++||||+|+||+++++.|+++|++|++++|+............ ...++.++.+|+.++            .+..+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4789999999999999999999999999999987543222111110 124678889998765            134689


Q ss_pred             EEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||......    ..+++...+++|+.++.++++++.+    .+  .++|++||...+.                +
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~  144 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD----------------A  144 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc----------------C
Confidence            9999998533212    1234678999999999999998843    22  3799999875431                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+    +|++++.++||.+.++
T Consensus       145 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        145 GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            223357999999999999998776    3899999999999854

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.73  E-value=9.7e-17  Score=144.50  Aligned_cols=165  Identities=15%  Similarity=0.090  Sum_probs=122.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc---ccccCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL---VHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      ..++++++||||+|+||++++++|+++|++|++++|+........   .......++..+.+|+.+.            .
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            356789999999999999999999999999999999754332211   1111224677888888775            2


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+||||||.......    .+++...+++|+.+...+++.+.    +.+ .++|++||...+.             
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  151 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ-------------  151 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC-------------
Confidence            3569999999996433222    22467789999999888877653    333 4899999976542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|.+.+.+++.++.+   .|++++.++||.|..+.
T Consensus       152 ---~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        152 ---PEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             ---CCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence               2223367999999999999988876   48999999999997653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=8.1e-17  Score=142.49  Aligned_cols=165  Identities=12%  Similarity=0.026  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++|+||||+|+||.++++.|++.|++|++++|+................+.++.+|+.++.            +..+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999975432211111111235788899987641            3458


Q ss_pred             CEEEEccCCCCCCCc--cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          182 DQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       182 D~Vih~A~~~~~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      |.+||+++.......  .+.+...++.|+.++..+++.+.+.   +.++|++||.....               .+....
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~---------------~~~~~~  147 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIY---------------KASPDQ  147 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcc---------------cCCCCc
Confidence            999999975332111  1235667899999999888877553   34799998864321               122334


Q ss_pred             ChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          257 SCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ..|+.+|.+.+.+++.++.+.   +++++++||++++++.
T Consensus       148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence            579999999999998888764   8999999999999863

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=7e-17  Score=143.94  Aligned_cols=162  Identities=17%  Similarity=0.151  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc---cccccccCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK---DNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      ...+|+|+||||+.+||.+++.+|+++|..++.+.|..+..+   +++.+.....++.++.+|+.+.            .
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            457889999999999999999999999999888888655433   2223333333688999999875            4


Q ss_pred             ccCCCEEEEccCCCCCCCccC-----ChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVHYKY-----NPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +.++|++|||||... ....+     +....+++|+.|+..+.+++.    +.+ .+||.+||+..+             
T Consensus        89 fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-------------  154 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-------------  154 (282)
T ss_pred             cCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-------------
Confidence            578999999999866 33222     345689999999999888763    444 599999998765             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhhCC---cEE-EEEeCceeC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGAGV---EVR-IARIFNTYG  291 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i---~~~-ivRp~~v~G  291 (335)
                         .+.+....|+.||.+.+.+...+..|..-   .+. ++-||.|-.
T Consensus       155 ---~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  155 ---MPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             ---cCCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence               34444458999999999999999988622   122 588888754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.9e-16  Score=139.81  Aligned_cols=152  Identities=18%  Similarity=0.126  Sum_probs=116.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c------cCCCE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L------LEVDQ  183 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~------~~vD~  183 (335)
                      .+|+|+||||+|+||++++++|+++|++|++++|+....          ...+++.+|+.++.     +      .++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FPGELFACDLADIEQTAATLAQINEIHPVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence            357999999999999999999999999999999875431          01246677776641     1      25899


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||+||.......    .+++...+++|+.++.++.+++.    +.+. ++|++||...|+.                 .
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------------~  134 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-----------------L  134 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-----------------C
Confidence            9999997544332    23466789999999988877653    3444 8999999876542                 1


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|...+.+++.++.+   .|+++++++||.+..+.
T Consensus       135 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        135 DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence            2357999999999999988765   38999999999998764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.73  E-value=1.1e-16  Score=141.72  Aligned_cols=156  Identities=16%  Similarity=0.103  Sum_probs=116.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~  183 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+.....+.+.    ...+.++.+|+.+.            .+..+|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR----QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            5699999999999999999999999999999987543222221    12356788888764            1345999


Q ss_pred             EEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC---CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          184 IYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG---AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       184 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|||||......    ..+++...+++|+.++..+.+.+.+    .+   .++|++||....                .+
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~----------------~~  141 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE----------------KG  141 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc----------------cC
Confidence            999998643322    1335678999999999988776644    22   379999886432                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYG  291 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~G  291 (335)
                      ......|+.+|.+.+.+++.++.+.  ++++++|+||.+.-
T Consensus       142 ~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        142 SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            2334679999999999999999875  69999999998853

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.73  E-value=9.7e-17  Score=142.44  Aligned_cols=160  Identities=13%  Similarity=0.066  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++++++||||+|+||++++++|+++|+.|++.+|+........ ... ..++.++.+|+.+.            .+.++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA-AEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45679999999999999999999999999888877543322111 111 23577888888764            13569


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccc-cCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEV-YGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v-~~~~~~~~~~E~~~~~~~  251 (335)
                      |+||||||......    ..+++...+++|+.++.++++++.+    .+ .++|++||... ++.               
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  146 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN---------------  146 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC---------------
Confidence            99999998644322    2235678899999999999887643    23 38999999644 321               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                        .....|+.+|.+.+.+++.++.+   .++++++++||.+..+
T Consensus       147 --~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~  188 (245)
T PRK12936        147 --PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA  188 (245)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence              12356999999999988888765   3899999999988664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.2e-16  Score=143.10  Aligned_cols=163  Identities=17%  Similarity=0.181  Sum_probs=120.8

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCC--------ccc--ccccc--CCCceEEEeccccchh--
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGR--------KDN--LVHHF--RNPRFELIRHDVVEPI--  177 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~--------~~~--~~~~~--~~~~~~~~~~D~~~~~--  177 (335)
                      .++++|+||||+|  +||.+++++|+++|++|++++|++...        .+.  +....  ....+.++.+|+.+..  
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4678999999995  799999999999999999998862211        000  11111  1235788899987741  


Q ss_pred             ----------ccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCC
Q 019794          178 ----------LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPL  238 (335)
Q Consensus       178 ----------~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~  238 (335)
                                +..+|+|||+||........    ++++..+++|+.++.++++++.+.    + .++|++||...+.   
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---  159 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG---  159 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC---
Confidence                      24689999999864332222    245678999999999999987542    2 3899999976652   


Q ss_pred             CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                                   +......|+.+|++.+.+++.++.+.   +++++.++||.+..+
T Consensus       160 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~  203 (256)
T PRK12748        160 -------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG  203 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence                         22334679999999999999988763   899999999988765

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=142.29  Aligned_cols=164  Identities=20%  Similarity=0.149  Sum_probs=122.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+........... ....+++++.+|+.++.            +.+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999988654322211111 01246788889987652            246


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+|||++|.......    .+.+...+++|+.++.++++++.+.    + .++|++||...+.                
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  148 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW----------------  148 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc----------------
Confidence            9999999986543221    2245677899999999999887542    2 3899999965542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|...+.+++.++.+   .+++++.++||.+..+.
T Consensus       149 ~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (250)
T PRK12939        149 GAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA  193 (250)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence            2223457999999999999988765   48999999999987764

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2e-16  Score=143.38  Aligned_cols=161  Identities=12%  Similarity=0.046  Sum_probs=118.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---c---cccc--CCCceEEEeccccchh--------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---L---VHHF--RNPRFELIRHDVVEPI--------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~---~~~~--~~~~~~~~~~D~~~~~--------  177 (335)
                      .++++++||||+|+||++++++|+++|++|++++|+.......   +   ...+  ...++.++.+|+.++.        
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999875432110   0   0111  1235778889987651        


Q ss_pred             ----ccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCC
Q 019794          178 ----LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       178 ----~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                          +.++|+|||+||........    +++...+++|+.++.++++++...     +.++|++||.....         
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  154 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------  154 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------
Confidence                24699999999965433322    245778999999999999998642     24788888753210         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCc
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFN  288 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~  288 (335)
                      .     ....+...|+.+|++.|.+++.++.+.   +++++.+.|+.
T Consensus       155 ~-----~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~  196 (273)
T PRK08278        155 P-----KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT  196 (273)
T ss_pred             c-----cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence            0     111345789999999999999998875   89999999984

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=9.9e-17  Score=143.60  Aligned_cols=161  Identities=17%  Similarity=0.092  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      .++|+++||||+  +.||.+++++|+++|++|++.+|+.. ..+.+.+ .....+..+.+|+.++            .+.
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999  79999999999999999999988622 1111211 1223577888999765            235


Q ss_pred             CCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+|++|||||....    ..    ..+++...+++|+.++..+++++.+.   +.++|++||....              
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~--------------  148 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE--------------  148 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc--------------
Confidence            69999999996532    11    12356788999999999999887653   2489999986432              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+......|+.+|++.+.+++.++.+.   |++++.|.||.|-.+
T Consensus       149 --~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~  193 (252)
T PRK06079        149 --RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL  193 (252)
T ss_pred             --ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence              122334679999999999999998874   899999999999765

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.2e-16  Score=142.00  Aligned_cols=164  Identities=17%  Similarity=0.134  Sum_probs=122.1

Q ss_pred             CCCCeEEEEcCCc-hhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGGAG-FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGatG-~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++++++||||+| .||+++++.|+++|++|++++|+.........   ......++.++.+|+.++            .
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999997 79999999999999999999886543322211   111224678888998764            1


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +..+|+||||||.......    .+++...+++|+.++..+++++.+    .+  .++|++||...+             
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~-------------  161 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW-------------  161 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc-------------
Confidence            2468999999996433222    234677899999999998887643    22  378888886443             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|++.+.+++.++.+   +|+++++++||.++.+.
T Consensus       162 ---~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~  207 (262)
T PRK07831        162 ---RAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF  207 (262)
T ss_pred             ---CCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence               22234467999999999999999876   48999999999998874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=142.86  Aligned_cols=163  Identities=12%  Similarity=0.071  Sum_probs=120.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----------ccCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----------LLEVD  182 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~vD  182 (335)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+.........++.++.+|+.++.           +..+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            3567999999999999999999999999999999875432221111112346788889987752           35689


Q ss_pred             EEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||+||........    +.+...+++|+.|+.++++.+.+    .+ .++|++||...+.                +.
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  146 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI----------------GY  146 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc----------------CC
Confidence            999999865432221    24567889999999999988754    22 3788888854331                12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|...+.+++.++.+   .+++++.+.||.+.++
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~  188 (263)
T PRK09072        147 PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA  188 (263)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence            23367999999999999888866   3799999999988664

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.1e-16  Score=148.64  Aligned_cols=164  Identities=12%  Similarity=0.081  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++|+||||+|+||++++++|+++|++|++++|+.....+...... ....+.++.+|+.++.            +..
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            456899999999999999999999999999999987543322111110 1235667888887651            256


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||......+.    +++.+.+++|+.++.++++++.    +.+ .++|++||...+.                
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~----------------  148 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA----------------  148 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC----------------
Confidence            99999999965443332    2456789999999999888764    333 4899999876552                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+.+.++.+    .+++++.+.||.+.++.
T Consensus       149 ~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~  194 (330)
T PRK06139        149 AQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG  194 (330)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence            2233467999999988888888766    27999999999998874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=142.80  Aligned_cols=162  Identities=20%  Similarity=0.177  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +|+|+||||+|+||..+++.|+++|++|+++++......+......  ...++.++.+|+.+..            +..+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999876543222111111111  1236778889987641            2469


Q ss_pred             CEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH-c-------CCeEEEEecccc-cCCCCCCCCCCCcC
Q 019794          182 DQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR-V-------GAKFLLTSTSEV-YGDPLEHPQKETYW  247 (335)
Q Consensus       182 D~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~-~-------~~r~v~iSS~~v-~~~~~~~~~~E~~~  247 (335)
                      |+|||+||......     ..+++...+++|+.++..+++++.+ .       +.++|++||... ++..          
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------  151 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----------  151 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC----------
Confidence            99999998653322     1123567799999999988765433 1       136999998644 3211          


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            .....|+.+|.+.+.+++.++.+.   |+++++++||.+..+.
T Consensus       152 ------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~  194 (248)
T PRK06947        152 ------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI  194 (248)
T ss_pred             ------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence                  112469999999999999988764   8999999999998874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.72  E-value=2.2e-16  Score=140.14  Aligned_cols=162  Identities=17%  Similarity=0.093  Sum_probs=119.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++||||+|+||++++++|+++|++|++++|+...........  ....++.++.+|+.+..            +..+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            358999999999999999999999999999998743111111111  11245788999987752            3469


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||......    ..+.+...+++|+.++.++++++    ++.+. +||++||...+.                +
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----------------~  145 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK----------------G  145 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc----------------C
Confidence            99999998653322    12346778999999999986654    44444 899999976552                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       146 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  189 (245)
T PRK12824        146 QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM  189 (245)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence            223357999999999999888764   38999999999998764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.72  E-value=8.8e-17  Score=144.53  Aligned_cols=164  Identities=13%  Similarity=0.092  Sum_probs=117.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~------------~  177 (335)
                      ..++|+++||||+++||++++++|++.|++|+++.|......+.....+   ...++.++.+|+.++            .
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999888664322211111111   124678889999775            1


Q ss_pred             ccCCCEEEEccCCCCC------CCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASP------VHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~------~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~  242 (335)
                      +..+|+||||||....      ...    .+.+...+++|+.+...+.+.+.+    .+ .++|++||...+        
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  156 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNL--------  156 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccc--------
Confidence            3569999999985421      111    124567888999888776665533    33 389999996432        


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                              .+......|+.+|++.+.+++.++.+.   |++++.+.||.+-.+
T Consensus       157 --------~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~  201 (260)
T PRK08416        157 --------VYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD  201 (260)
T ss_pred             --------cCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence                    122334579999999999999999875   899999999988654

>PRK08017 oxidoreductase; Provisional

Probab=99.72  E-value=5.9e-17  Score=144.95  Aligned_cols=155  Identities=17%  Similarity=0.125  Sum_probs=112.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-------------ccCCCE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------------LLEVDQ  183 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~vD~  183 (335)
                      ++|+||||+|+||.++++.|+++|++|++++|+.+.... .    ....++.+.+|+.+..             ...+|.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-M----NSLGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-H----HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            589999999999999999999999999999987543221 1    1124567777776541             145899


Q ss_pred             EEEccCCCCCCC----ccCChhhHHhhHHHHHHHH----HHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVH----YKYNPVKTIKTNVMGTLNM----LGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~l----l~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +||+||......    ..+++...+++|+.|+.++    ++.+++.+. ++|++||...+                .+..
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~----------------~~~~  141 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL----------------ISTP  141 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccc----------------cCCC
Confidence            999998643222    1224567899999998886    445555554 79999986443                1223


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ....|+.+|...|.+.+.++.+   .++++++++||.+..+
T Consensus       142 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  182 (256)
T PRK08017        142 GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR  182 (256)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc
Confidence            3467999999999988876543   4899999999887554

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-16  Score=148.59  Aligned_cols=163  Identities=16%  Similarity=0.122  Sum_probs=120.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++|+||||+|+||++++++|+++|++|++++|+.....+...+. ....++.++.+|+.++.            +..
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            45679999999999999999999999999999998754322211111 01245778889987751            346


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||.......    .+++...+++|+.|+.++++.+    ++.+ .+||++||...+.                
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~----------------  149 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR----------------  149 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc----------------
Confidence            9999999986433222    2345678999998888766654    3443 3899999987763                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|...+.+++.++.+.     ++++++++||.+.++
T Consensus       150 ~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~  195 (334)
T PRK07109        150 SIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP  195 (334)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence            22334679999999999998887653     699999999998776

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=1e-16  Score=142.83  Aligned_cols=164  Identities=16%  Similarity=0.087  Sum_probs=117.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc--ccCCCceEEEecccc--ch------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVV--EP------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~--~~------------  176 (335)
                      ..++++|+||||+|+||.+++++|++.|++|++++|+.........+  .....++.++.+|+.  ++            
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999975432211111  111234556666664  21            


Q ss_pred             hccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          177 ILLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      .+..+|+|||+||......     ..+.+...+++|+.++.++++++.    +.+. +||++||.....           
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------  157 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ-----------  157 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-----------
Confidence            2346999999998643321     123467889999999999988764    3344 899999865431           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                           +......|+.+|++.+.+++.++.+.   ++++++++||.+-++
T Consensus       158 -----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~  201 (247)
T PRK08945        158 -----GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA  201 (247)
T ss_pred             -----CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence                 12233579999999999999988765   799999999988654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=142.48  Aligned_cols=157  Identities=15%  Similarity=0.134  Sum_probs=117.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh---------c-------c
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---------L-------L  179 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------~-------~  179 (335)
                      ||+++||||+|+||++++++|+++|++|++++|+....   .... ...++.++.+|+.+..         +       .
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS---LAAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh---hhhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            46899999999999999999999999999999865421   1111 1235778888886641         1       2


Q ss_pred             CCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|++|||||......     ..+.+...+++|+.++..+++.+.+    .+ .++|++||...+               
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~---------------  141 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR---------------  141 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc---------------
Confidence            5899999998654321     1234577899999998877666543    33 389999997665               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh--hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~--~~i~~~ivRp~~v~Gp  292 (335)
                       .+..+...|+.+|...|.+++.++.+  .++++++++||.+-.+
T Consensus       142 -~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        142 -NAYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence             34445578999999999999998865  5899999999988554

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.8e-16  Score=139.15  Aligned_cols=157  Identities=15%  Similarity=0.116  Sum_probs=113.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc---cCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL---LEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~vD~Vih~  187 (335)
                      +|+++||||+|+||++++++|+++ ++|++++|+.....+ +...  ...++++.+|+.++     .+   .++|+|||+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDE-LAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH-HHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            579999999999999999999999 999999987433211 1111  13467888998775     22   269999999


Q ss_pred             cCCCCCCCc----cCChhhHHhhHHHHHHHHH----HHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          188 ACPASPVHY----KYNPVKTIKTNVMGTLNML----GLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       188 A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll----~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +|.......    .+++...+++|+.+..++.    +.+++.+.++|++||...+.                +..+...|
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~----------------~~~~~~~y  142 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLR----------------ANPGWGSY  142 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcC----------------cCCCCchH
Confidence            986443221    1235567899999955544    44455556899999976653                22234679


Q ss_pred             HHHHHHHHHHHHHHHhhh-C-CcEEEEEeCceeCC
Q 019794          260 DEGKRTAETLTMDYHRGA-G-VEVRIARIFNTYGP  292 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~-~-i~~~ivRp~~v~Gp  292 (335)
                      +.+|...+.+++.++.+. + ++++.++||.+.++
T Consensus       143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~  177 (227)
T PRK08219        143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTD  177 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccch
Confidence            999999999999887653 4 89999999877654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=2.1e-16  Score=140.85  Aligned_cols=163  Identities=15%  Similarity=0.100  Sum_probs=119.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++++++||||+|+||.++++.|+++|++|++++|+........... ....++.++.+|+.++.            ...
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999998754322211111 01345777888886641            245


Q ss_pred             CCEEEEccCCCCCCC-------------ccCChhhHHhhHHHHHHHHHHHHHH----c--CCeEEEEecccccCCCCCCC
Q 019794          181 VDQIYHLACPASPVH-------------YKYNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~r~v~iSS~~v~~~~~~~~  241 (335)
                      +|+|||+||......             ..+.+...+++|+.++..+++.+..    .  +.++|++||...|+.     
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----  157 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-----  157 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence            899999998543211             1124566889999999988765432    2  236899998766532     


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                                  .+...|+.+|.+.+.+++.++.+   .+++++.++||.+.++.
T Consensus       158 ------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~  200 (253)
T PRK08217        158 ------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM  200 (253)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence                        23367999999999999999876   48999999999998874

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.6e-16  Score=142.37  Aligned_cols=160  Identities=18%  Similarity=0.118  Sum_probs=115.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++|+||||+|+||.+++++|+++|++|++++|+........ ...   ...++.+|+.++.            ..++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA-DEV---GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHc---CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999998643221111 111   1246777876641            2468


Q ss_pred             CEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecc-cccCCCCCCCCCCCcCCC
Q 019794          182 DQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTS-EVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       182 D~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~-~v~~~~~~~~~~E~~~~~  249 (335)
                      |+|||+||......      ..+.+...+++|+.++..+++.+.    +.+ .++|++||. .+++.             
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-------------  147 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-------------  147 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-------------
Confidence            99999998643211      112367889999999988887654    333 389999885 34432             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|++.+.+.+.++.+   .|+++++++||.+.++.
T Consensus       148 ---~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~  191 (255)
T PRK06057        148 ---ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL  191 (255)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence               122356999999888888876654   38999999999998875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.4e-16  Score=144.24  Aligned_cols=162  Identities=12%  Similarity=0.010  Sum_probs=118.6

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|+++||||++  +||++++++|+++|++|++.+|+... .+....... ......+.+|+.+.            .+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4678999999997  99999999999999999998876321 111111100 01224678898775            23


Q ss_pred             cCCCEEEEccCCCCCC----C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      ..+|++|||||.....    .    ..++|...+++|+.++.++++++...   +.++|++||....             
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~-------------  150 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST-------------  150 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc-------------
Confidence            5699999999964321    1    22357788999999999998876532   3489999986542             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         .+......|+.+|++.+.+++.++.+.   |++++.|.||.+-.+
T Consensus       151 ---~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~  195 (271)
T PRK06505        151 ---RVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL  195 (271)
T ss_pred             ---ccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence               122234579999999999999999874   899999999998765

>PRK06484 short chain dehydrogenase; Validated

Probab=99.71  E-value=1.7e-16  Score=156.51  Aligned_cols=163  Identities=17%  Similarity=0.201  Sum_probs=124.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ...+|+++||||+|+||.+++++|+++|++|++++|+....... .... ...+..+.+|+.++            .+..
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKL-AEAL-GDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34789999999999999999999999999999999865432221 1111 23456678888765            1346


Q ss_pred             CCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|+||||||..... .    ..+++...+++|+.++.++++++...   +.+||++||...+                .+
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------~~  407 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL----------------LA  407 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc----------------CC
Confidence            99999999964321 1    12356788999999999999987653   2489999997654                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|+..+.+++.++.+.   |++++++.||.|.++.
T Consensus       408 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        408 LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            3345689999999999999998774   7999999999998763

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=1.7e-16  Score=146.21  Aligned_cols=161  Identities=17%  Similarity=0.057  Sum_probs=119.0

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch-----------h
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP-----------I  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~-----------~  177 (335)
                      ...+++|+++||||+|+||++++++|+++|++|++.++......+.....+  ...++.++.+|+.+.           .
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999998875332222221111  124677888998764           1


Q ss_pred             ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc------------CCeEEEEecccccCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV------------GAKFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~------------~~r~v~iSS~~v~~~~~~~~  241 (335)
                      +..+|+||||||......    ..+++...+++|+.++.++++++...            ..++|++||...+.      
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  160 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV------  160 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc------
Confidence            356999999999754332    22356788999999999999876421            13799999865442      


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeC
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~  287 (335)
                                +......|+.+|.+.+.+++.++.+   +|++++++.|+
T Consensus       161 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        161 ----------GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence                      1223357999999999999998876   48999999997

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=1.3e-16  Score=143.33  Aligned_cols=161  Identities=12%  Similarity=0.094  Sum_probs=116.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~V  184 (335)
                      |+++||||+|+||++++++|+++|++|++++|+.....+...+......+.++.+|+.++            .+.++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            589999999999999999999999999999987543222111111123567888998764            23569999


Q ss_pred             EEccCCCCCC--C----ccCChhhHHhhHHHHHHHHHHHH----H-HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          185 YHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLA----K-RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       185 ih~A~~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a----~-~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |||||.....  .    ..+++...+.+|+.++..+...+    . +.+ .++|++||....                .+
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~----------------~~  144 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK----------------EP  144 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC----------------CC
Confidence            9999964311  1    12245566788888876665543    2 222 489999997654                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+++.++.++   |++++.+.||.+-.+.
T Consensus       145 ~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        145 MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence            3345689999999999999999875   7999999999886653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.6e-16  Score=144.02  Aligned_cols=161  Identities=14%  Similarity=0.056  Sum_probs=118.6

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCC--CccccccccCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTG--RKDNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++|+++||||+  ++||++++++|+++|++|++.+|+...  ..+.+...... . ..+.+|+.+.            .
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHHH
Confidence            457899999997  799999999999999999999886421  11111111121 2 5678898775            2


Q ss_pred             ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +..+|++|||||....    ..    ..+++...+++|+.++..+++++...   +.++|++||....            
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~------------  148 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV------------  148 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc------------
Confidence            3569999999996432    11    12356789999999999999887542   2489999986432            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|++.+.+.+.++.+.   |++++.+.||.|..+
T Consensus       149 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (274)
T PRK08415        149 ----KYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL  193 (274)
T ss_pred             ----cCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence                122234579999999999999999764   899999999998764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2.6e-16  Score=141.34  Aligned_cols=163  Identities=12%  Similarity=0.024  Sum_probs=119.9

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++|+++||||+  ++||.+++++|+++|++|++++|......  +.+.......++..+.+|+.++            .
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            467899999997  89999999999999999999887532111  1122222234577888999775            2


Q ss_pred             ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +..+|++|||||....    ..    ..+.+...+++|+.+...+++++.+.   +.++|++||....            
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------------  152 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE------------  152 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc------------
Confidence            3569999999986431    11    11245678899999999888877643   2489999986542            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|++.+.+++.++.+.   |++++.|.||.+..+
T Consensus       153 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  197 (257)
T PRK08594        153 ----RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL  197 (257)
T ss_pred             ----cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence                122334579999999999999998764   799999999998765

>PRK05855 short chain dehydrogenase; Validated

Probab=99.71  E-value=1.7e-16  Score=158.27  Aligned_cols=164  Identities=16%  Similarity=0.084  Sum_probs=124.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ...+++++||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.++.            ..
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            356689999999999999999999999999999998754322211111 01236788899998762            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|+||||||.......    .+++...+++|+.|+.++++++..    .+  .+||++||...|.              
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------  457 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--------------  457 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--------------
Confidence            59999999997544332    235677899999999999887543    33  4899999987773              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|++.+.+++.++.+   .|+++++++||.|-.+
T Consensus       458 --~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        458 --PSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             --CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence              2334578999999999999988866   4899999999998653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.71  E-value=1.8e-16  Score=143.13  Aligned_cols=161  Identities=16%  Similarity=0.097  Sum_probs=115.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEEeccccchh----------------
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI----------------  177 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~----------------  177 (335)
                      ++++||||+|+||++++++|+++|++|++++|........+...+   ....+..+.+|+.++.                
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            379999999999999999999999999998764322221111111   1234556788887752                


Q ss_pred             ccCCCEEEEccCCCCCCCcc---------------CChhhHHhhHHHHHHHHHHHHHHcC-----------CeEEEEecc
Q 019794          178 LLEVDQIYHLACPASPVHYK---------------YNPVKTIKTNVMGTLNMLGLAKRVG-----------AKFLLTSTS  231 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~~---------------~~~~~~~~~Nv~gt~~ll~~a~~~~-----------~r~v~iSS~  231 (335)
                      +.++|+||||||........               .++...+++|+.++..+++++....           .++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            24699999999964332211               1255789999999999988764321           257777775


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       232 ~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ...                .+......|+.+|++.+.+++.++.+   .|+++++|+||.+..+.
T Consensus       162 ~~~----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~  210 (267)
T TIGR02685       162 MTD----------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD  210 (267)
T ss_pred             hcc----------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence            432                23344568999999999999999877   48999999999987653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.71  E-value=2.3e-16  Score=139.79  Aligned_cols=161  Identities=17%  Similarity=0.116  Sum_probs=116.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------ccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      |+++||||+|+||++++++|+++|++|+++.|......+.....  ....++.++.+|+.++.            ...+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            58999999999999999999999999999888322111111111  11246788889987651            34699


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||+||.......    .+++...+++|+.++..+++.+    ++.+. ++|++||.....                +.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------~~  144 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK----------------GQ  144 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------CC
Confidence            99999986543221    2245678899999988866554    44454 899999864331                12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|...+.+++.++++   .+++++.++||.+.++.
T Consensus       145 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  187 (242)
T TIGR01829       145 FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM  187 (242)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence            23457999999999998888765   38999999999998875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02415 23BDH acetoin reductases

Probab=99.71  E-value=1.7e-16  Score=141.77  Aligned_cols=161  Identities=21%  Similarity=0.106  Sum_probs=117.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCCCE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEVDQ  183 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~vD~  183 (335)
                      |+++||||+|+||.+++++|++.|++|+++.|+........... ....++.++.+|+.++.            +..+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999988643222111111 11235778889987752            246899


Q ss_pred             EEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          184 IYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       184 Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |||+||......    ..+.+...+++|+.++..+++++.+    .+  .++|++||.....                +.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  144 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE----------------GN  144 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC----------------CC
Confidence            999998643322    1234567899999999988776643    22  4799998854431                12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ...+.|+.+|++.+.+++.++.+.   ++++++++||.+..+.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       145 PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence            234679999999999999887764   7999999999886653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2.8e-16  Score=141.17  Aligned_cols=163  Identities=16%  Similarity=0.055  Sum_probs=119.7

Q ss_pred             CCCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccch-----------
Q 019794          112 IGRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEP-----------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~-----------  176 (335)
                      ...++|+++||||+  ++||.+++++|+++|++|++++|+....+  +.+....  .....+.+|+.+.           
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHH
Confidence            34578899999998  59999999999999999999988643211  1111111  2245678888765           


Q ss_pred             -hccCCCEEEEccCCCCCC----C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCC
Q 019794          177 -ILLEVDQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       177 -~~~~vD~Vih~A~~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                       .+..+|++|||||.....    .    ..+++...+++|+.++..+++++...   +.++|++||....          
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~----------  153 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE----------  153 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc----------
Confidence             235699999999964321    1    12356789999999999999987543   3479999886432          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                            .+......|+.+|++.+.+.+.++.+.   |++++.+.||.+-.+
T Consensus       154 ------~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~  198 (258)
T PRK07533        154 ------KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR  198 (258)
T ss_pred             ------cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence                  122234679999999999999998764   899999999998665

>PRK07069 short chain dehydrogenase; Validated

Probab=99.70  E-value=3.6e-16  Score=139.38  Aligned_cols=160  Identities=15%  Similarity=0.114  Sum_probs=115.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc----CCCceEEEeccccch------------hccCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      +|+||||+|+||.++++.|+++|++|++++|+.....+.+...+    ....+..+.+|+.++            .+..+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999987322221221111    112344567787664            23568


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHH----HHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVM----GTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~----gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+|||+||.......    .+++...+++|+.    ++..++.++++.+. +||++||...+.                +
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~----------------~  144 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK----------------A  144 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc----------------C
Confidence            999999986543322    1245677889998    66666777766554 899999987653                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|...+.+++.++.+.     +++++.++||.+.++.
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~  190 (251)
T PRK07069        145 EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI  190 (251)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence            2334579999999999999888763     4899999999998875

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.70  E-value=2.6e-16  Score=145.73  Aligned_cols=165  Identities=13%  Similarity=0.074  Sum_probs=119.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch----------hcc--
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP----------ILL--  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~----------~~~--  179 (335)
                      .+++++||||||+||++++++|+++|++|++++|+.+...+...   .......+..+.+|+.+.          .+.  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            46799999999999999999999999999999997654322211   111123566667776531          122  


Q ss_pred             CCCEEEEccCCCCCC--Cc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPV--HY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~--~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ++|++|||||.....  ..    .+++...+++|+.|+.++++++..    .+ .++|++||...+..            
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------  199 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVI------------  199 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC------------
Confidence            366999999975321  11    224567899999999999988643    33 48999999765421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.||+..+.+.+.++.|.   |++++++.||.|-.+-
T Consensus       200 --~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~  245 (320)
T PLN02780        200 --PSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM  245 (320)
T ss_pred             --CCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence              011234689999999999999998774   8999999999997763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.5e-16  Score=138.95  Aligned_cols=165  Identities=15%  Similarity=0.064  Sum_probs=119.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      .+++++|+||||+|+||.+++++|+++|++|+++ +|+........... .....+.++.+|+.++.            +
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999988 77643221111110 01235778889987652            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+|||++|......    ..+.+...+++|+.++.++++.+..    .+. ++|++||...+..             
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-------------  148 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-------------  148 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-------------
Confidence            37999999998753221    1224577899999999998887754    333 7999999655421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|.+.+.+++.++.+.   |+++++++||.+..+.
T Consensus       149 ---~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~  192 (247)
T PRK05565        149 ---ASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM  192 (247)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence               1223579999999999888887653   8999999999987653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.6e-16  Score=142.65  Aligned_cols=158  Identities=18%  Similarity=0.111  Sum_probs=116.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC--------CCcccccccc--CCCceEEEeccccch-------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT--------GRKDNLVHHF--RNPRFELIRHDVVEP-------  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~--------~~~~~~~~~~--~~~~~~~~~~D~~~~-------  176 (335)
                      .++|+++||||+++||.+++++|++.|++|+++++...        .........+  ...++.++.+|+.++       
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999887641        0111111111  123567788898764       


Q ss_pred             -----hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c---C----CeEEEEecccccCC
Q 019794          177 -----ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V---G----AKFLLTSTSEVYGD  236 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~---~----~r~v~iSS~~v~~~  236 (335)
                           .+..+|++|||||.......    .+++...+++|+.++..+++++..    .   +    .+||++||...+  
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--  161 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL--  161 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC--
Confidence                 23569999999997543221    235778999999999999887642    1   1    379999996543  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeC
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~  287 (335)
                                    .+......|+.+|.+.+.+++.++.+   .|++++.|.||
T Consensus       162 --------------~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        162 --------------QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             --------------cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence                          12233467999999999999999877   48999999998

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4e-16  Score=141.17  Aligned_cols=161  Identities=16%  Similarity=0.145  Sum_probs=116.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------hccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.......+.  .......++.+|+.++            .+.++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999999999999999988654322111111  1122344567787654            234689


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c--CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||.......    .+++...+++|+.++.++++++..    .  +.++|++||...+                .+
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------------~~  144 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL----------------VA  144 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc----------------CC
Confidence            99999986433222    234677899999999999998642    2  2489999986543                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+.+.++.+   .++++++++||.+.++.
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        145 LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            223457999999999888887754   48999999999998864

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.9e-16  Score=138.29  Aligned_cols=157  Identities=12%  Similarity=0.037  Sum_probs=118.5

Q ss_pred             EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEEEccCCC
Q 019794          120 VVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIYHLACPA  191 (335)
Q Consensus       120 lVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vih~A~~~  191 (335)
                      +||||+|+||++++++|+++|++|++++|+................++++.+|+.++        .+..+|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999987432221111110134678889998775        234589999999864


Q ss_pred             CCCCc----cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          192 SPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       192 ~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      .....    .+++...+++|+.++.+++++....+. ++|++||...+.                +..+...|+.+|.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~----------------~~~~~~~Y~~sK~a~  144 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR----------------PSASGVLQGAINAAL  144 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC----------------CCCcchHHHHHHHHH
Confidence            43222    235678899999999999996654443 899999987763                333456899999999


Q ss_pred             HHHHHHHHhhh-CCcEEEEEeCceeCC
Q 019794          267 ETLTMDYHRGA-GVEVRIARIFNTYGP  292 (335)
Q Consensus       267 E~l~~~~a~~~-~i~~~ivRp~~v~Gp  292 (335)
                      +.+++.++.+. +++++.++||.+-.+
T Consensus       145 ~~~~~~la~e~~~irv~~i~pg~~~t~  171 (230)
T PRK07041        145 EALARGLALELAPVRVNTVSPGLVDTP  171 (230)
T ss_pred             HHHHHHHHHHhhCceEEEEeecccccH
Confidence            99999998775 689999999987654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=6.7e-16  Score=139.06  Aligned_cols=162  Identities=15%  Similarity=0.049  Sum_probs=117.1

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~  178 (335)
                      .++|+++||||++  +||++++++|+++|++|++.+|+.. ..+...+.. .......+.+|+.++            .+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            4578999999985  9999999999999999998887621 111111111 112355788898775            23


Q ss_pred             cCCCEEEEccCCCCCCC---------ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASPVH---------YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ..+|++|||||......         ..+.+...+++|+.+...+.+++...   +.++|++||....            
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------------  150 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------  150 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC------------
Confidence            56999999999643211         12245678899999998888876542   3479999986532            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|.+.+.+++.++.+   .|++++.+.||.+..+
T Consensus       151 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (262)
T PRK07984        151 ----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  195 (262)
T ss_pred             ----CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence                12233457999999999999999987   3899999999998654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.69  E-value=4.4e-16  Score=137.95  Aligned_cols=159  Identities=14%  Similarity=0.040  Sum_probs=116.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccCCCEE
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLEVDQI  184 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~vD~V  184 (335)
                      |+||||+|+||.+++++|+++|++|++++|......+.....+  ...++.++.+|+.+.            ....+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999998875432222221111  124578889998765            13458999


Q ss_pred             EEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH-----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK-----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~-----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||+||......    ..+++...+++|+.++.++++++.     +.+ .++|++||...+.                +..
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~~  144 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM----------------GNR  144 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc----------------CCC
Confidence            99998644322    233577899999999999988752     223 3899999964331                222


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|++.+.+.+.++.+   .|++++.++||.+.++.
T Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (239)
T TIGR01831       145 GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM  186 (239)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence            3357999999999999888776   38999999999998764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.69  E-value=4.3e-16  Score=139.96  Aligned_cols=163  Identities=12%  Similarity=0.003  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCC-Cccc-ccccc-CCCceEEEeccccch------------
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTG-RKDN-LVHHF-RNPRFELIRHDVVEP------------  176 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~-~~~~~-~~~~~~~~~~D~~~~------------  176 (335)
                      .++|+++||||+  +.||++++++|++.|++|++..|+.+. +.+. +.+.. ....+.++.+|+.++            
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            467899999986  799999999999999999888765431 1111 11110 112356778888765            


Q ss_pred             hccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC
Q 019794          177 ILLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      .+..+|++|||||....    ..    ..++++..+++|+.++..+++++.+.   +.++|++||....           
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~-----------  152 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV-----------  152 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc-----------
Confidence            23569999999996431    11    12356789999999999998876532   3489999986442           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                           .+......|+.+|++.+.+++.++.+.   |++++.+.||.|-.+
T Consensus       153 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~  197 (258)
T PRK07370        153 -----RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL  197 (258)
T ss_pred             -----cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence                 222334679999999999999999874   799999999999765

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9e-16  Score=137.76  Aligned_cols=164  Identities=13%  Similarity=0.074  Sum_probs=121.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch--------hccCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP--------ILLEVD  182 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~--------~~~~vD  182 (335)
                      ..++|+++||||+|+||.+++++|++.|++|++++|+...........  ....++.++.+|+.++        .+..+|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            356789999999999999999999999999999998754322211111  1124577888888765        245699


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ++|||||.......    .+++...+++|+.+...+++.+.    +.+ .++|++||....                .+.
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~----------------~~~  147 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE----------------NPD  147 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc----------------CCC
Confidence            99999986432222    23567789999999999988763    333 379999886432                222


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|.+.+.+++.++.+   .|++++.+.||.+..+
T Consensus       148 ~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        148 ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            33467999999999999998765   4899999999998765

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.68  E-value=4.1e-16  Score=139.19  Aligned_cols=160  Identities=14%  Similarity=0.146  Sum_probs=115.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c-------c--C-
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L-------L--E-  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-------~--~-  180 (335)
                      ||+|+||||+|+||++++++|+++|++|++++|........+... ...+++++.+|+.+..     +       .  + 
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            468999999999999999999999999999998653221211111 1246778889987651     1       1  1 


Q ss_pred             -CCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          181 -VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       181 -vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                       .+++||+||...+..     ..+++...+++|+.++..+++.+..    .+  .++|++||...+              
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--------------  145 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK--------------  145 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc--------------
Confidence             127899998643321     2234667889999997777765533    22  379999997553              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp  292 (335)
                        .+..+...|+.+|++.+.+++.++.+     .+++++.++||.+-.+
T Consensus       146 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  192 (251)
T PRK06924        146 --NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN  192 (251)
T ss_pred             --CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence              34445578999999999999998866     3799999999988654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=5.9e-16  Score=140.20  Aligned_cols=161  Identities=13%  Similarity=0.017  Sum_probs=118.0

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++|+++||||+  ++||.+++++|+++|++|++++|+....+  +.+...+  .....+.+|+.++            .
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHHHh
Confidence            356899999997  89999999999999999998877521111  1111111  2245678898765            2


Q ss_pred             ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +..+|++|||||....    ..    ..+++...+++|+.++..+++++...   +.++|++||....            
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------------  153 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE------------  153 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc------------
Confidence            3569999999996532    11    12357889999999999999987653   3489999986432            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|++.+.+++.++.+.   |++++++.||.+..+
T Consensus       154 ----~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  198 (272)
T PRK08159        154 ----KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL  198 (272)
T ss_pred             ----cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence                122334679999999999999998874   799999999998654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.8e-16  Score=138.93  Aligned_cols=164  Identities=13%  Similarity=0.065  Sum_probs=121.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .++|+|+||||+|+||+.++++|+++|++ |++++|+........... .....+.++.+|+.++.            +.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999998 999988644322111111 11235677888887641            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ++|+|||+||.......    .+.+...+++|+.++.++++++.+    .+  .++|++||...++.             
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-------------  150 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG-------------  150 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-------------
Confidence            69999999986443221    223566899999999999888743    22  36999999776532             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|...|.+++.++.+.   +++++.++||.++++.
T Consensus       151 ---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~  194 (260)
T PRK06198        151 ---QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG  194 (260)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence               1223679999999999999988764   6999999999999875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.7e-16  Score=157.04  Aligned_cols=165  Identities=12%  Similarity=0.058  Sum_probs=124.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.+..            +.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            456889999999999999999999999999999998754322211111 01246788899987751            24


Q ss_pred             CCCEEEEccCCCCCCCc------cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPVHY------KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ++|+||||||.......      .+++...+++|+.|+.++++++.    +.+. ++|++||...+.             
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------  514 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT-------------  514 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-------------
Confidence            69999999996432221      13467789999999998877753    3343 899999987763             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|.+.+.+++.++.+.   |+++++++||.|..+.
T Consensus       515 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~  559 (657)
T PRK07201        515 ---NAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM  559 (657)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence               22334679999999999999988764   8999999999998764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.68  E-value=1.1e-15  Score=141.41  Aligned_cols=178  Identities=12%  Similarity=0.098  Sum_probs=121.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++++++||||+++||.+++++|+++| ++|++++|+.....+..... .....+.++.+|+.+.            ...+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999 99999998754322111111 1224577788898665            1246


Q ss_pred             CCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcC---CeEEEEecccccCCCCC----CCCC-
Q 019794          181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVG---AKFLLTSTSEVYGDPLE----HPQK-  243 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~---~r~v~iSS~~v~~~~~~----~~~~-  243 (335)
                      +|++|||||...+..     ..+.+...+++|+.|+..+++++.    +.+   .+||++||...+.....    .+.+ 
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999643221     123567789999999988877653    332   48999999866532110    0000 


Q ss_pred             C------CcC------CCCCCCCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCC
Q 019794          244 E------TYW------GNVNPIGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       244 E------~~~------~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp  292 (335)
                      +      ..|      ....+..+...|+.||++...+.+.++++    .|+.++.++||.|...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T  226 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADT  226 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCC
Confidence            0      000      00123345567999999988888888765    3799999999999643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=7.7e-16  Score=138.50  Aligned_cols=162  Identities=12%  Similarity=-0.004  Sum_probs=117.0

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC-CceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~------------~~  178 (335)
                      .++|+++||||++  +||.+++++|+++|++|++.+|+.. ..+.+...... .....+.+|+.++            .+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999997  8999999999999999998887531 11111111111 1223567888775            23


Q ss_pred             cCCCEEEEccCCCCCC----C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      ..+|++|||||.....    .    ..+++...+++|+.+...+++.+...   +.++|++||....             
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~-------------  151 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE-------------  151 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc-------------
Confidence            5699999999864311    1    12357789999999999998876432   3489999986442             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         .+......|+.+|++.+.+.+.++.+.   |++++.+.||.+-.+
T Consensus       152 ---~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  196 (260)
T PRK06603        152 ---KVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL  196 (260)
T ss_pred             ---cCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence               122234679999999999999998864   799999999998664

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.68  E-value=1e-15  Score=135.48  Aligned_cols=164  Identities=12%  Similarity=0.060  Sum_probs=127.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      ..+.+|++||||||++++|++++.+|+++|..+++.|.+.....+.....-....+....+|+.+.            ..
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            445678899999999999999999999999999999998777665544332224788899999765            35


Q ss_pred             cCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHH----Hc-CCeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RV-GAKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~-~~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      +++|++|||||........+    ..++.+++|+.|.....++..    +. ...+|.++|+..+               
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~---------------  177 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL---------------  177 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc---------------
Confidence            67999999999876555332    456799999999998887753    32 3489999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh------hCCcEEEEEeCcee
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG------AGVEVRIARIFNTY  290 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~------~~i~~~ivRp~~v~  290 (335)
                       ........|+.||.++..+-+.+..|      .|++.+.+.|+.+=
T Consensus       178 -~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~  223 (300)
T KOG1201|consen  178 -FGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN  223 (300)
T ss_pred             -cCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence             23344467999999998888887755      27999999998775

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.1e-16  Score=139.18  Aligned_cols=173  Identities=18%  Similarity=0.126  Sum_probs=117.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh-----------ccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI-----------LLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-----------~~~vD~  183 (335)
                      +|+++|||| |+||++++++|. +|++|++++|+.....+...... ...++.++.+|+.++.           +..+|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            468999998 799999999996 89999999987543222111111 1235778889987751           246999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCC-----CCCCCCCcCCCC---C-
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPL-----EHPQKETYWGNV---N-  251 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~-----~~~~~E~~~~~~---~-  251 (335)
                      ||||||...   ...++...+++|+.++.++++++.+.   +.++|++||........     ........+.+.   . 
T Consensus        80 li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         80 LVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             EEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            999998642   23568899999999999999987653   23577777754432110     000000000000   0 


Q ss_pred             --C---CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 --P---IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 --~---~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +   ......|+.+|++.+.+++.++.+.   |++++.+.||.+..+.
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence              0   0134679999999999999888764   7999999999997763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=6.8e-16  Score=138.93  Aligned_cols=162  Identities=10%  Similarity=-0.025  Sum_probs=115.7

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~------------~~  178 (335)
                      .++|+++||||  +++||++++++|+++|++|++.+|... ..+.+.+... ......+.+|+.++            .+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            46789999997  679999999999999999998877522 1111111111 12345678898775            23


Q ss_pred             cCCCEEEEccCCCCCC----C-c----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCC
Q 019794          179 LEVDQIYHLACPASPV----H-Y----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~----~-~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      ..+|++|||||.....    . .    .+.+...+++|+.+...+.+++..    .+.++|++||...+           
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~-----------  151 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAV-----------  151 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccc-----------
Confidence            5699999999975431    1 1    123566789999999888876543    22479999986543           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                           .+......|+.+|.+.+.+++.++.+   .|++++.+.||.|-.+
T Consensus       152 -----~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~  196 (261)
T PRK08690        152 -----RAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL  196 (261)
T ss_pred             -----cCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence                 12233467999999999999998865   4899999999998665

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.4e-15  Score=133.49  Aligned_cols=159  Identities=17%  Similarity=0.120  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------cc--CCCEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LL--EVDQIY  185 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~--~vD~Vi  185 (335)
                      |++++||||+|+||++++++|++.|++|++++|+.+...+ +.    ...++++.+|+.+..        +.  .+|+||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~-~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQ----ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH-HH----hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            4689999999999999999999999999999987543221 11    123567788887651        22  489999


Q ss_pred             EccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecc-cccCCCCCCCCCCCcCCCCCCCC
Q 019794          186 HLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       186 h~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~-~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |++|......      ..+++...+++|+.++.++++++.+.    +.+++++||. ..++..              +..
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  141 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA--------------TGT  141 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc--------------cCC
Confidence            9998753211      23356789999999999999988642    2478888885 344321              111


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh-CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~ivRp~~v~Gp~  293 (335)
                      +...|+.+|...+.+++.++.++ +++++.++||.+..+.
T Consensus       142 ~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        142 TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence            22369999999999999988765 7999999999998764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1e-15  Score=134.51  Aligned_cols=152  Identities=13%  Similarity=0.153  Sum_probs=114.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c----cCCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L----LEVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~----~~vD~Vih~  187 (335)
                      |+++||||+|+||++++++|+++|++|++++|+.+...... +   ...+.++.+|+.++.     +    ..+|++|||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~-~---~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAA-K---ELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---hccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            47999999999999999999999999999988643221111 1   113567788887652     1    258999999


Q ss_pred             cCCCCC---C---C---ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          188 ACPASP---V---H---YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       188 A~~~~~---~---~---~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      ||....   .   .   ..+++.+.+++|+.++.++++++.+.   +.++|++||...                    ..
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------------~~  136 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------------PA  136 (223)
T ss_pred             CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------------CC
Confidence            984211   0   1   13457889999999999999987642   348999998531                    11


Q ss_pred             CChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ...|+.+|++.+.+++.++.+   .|++++.+.||.+..+
T Consensus       137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~  176 (223)
T PRK05884        137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP  176 (223)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence            257999999999999999876   4899999999998765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=3.1e-15  Score=134.19  Aligned_cols=163  Identities=15%  Similarity=0.149  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCC-------cc---cccccc--CCCceEEEeccccch---
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGR-------KD---NLVHHF--RNPRFELIRHDVVEP---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~-------~~---~~~~~~--~~~~~~~~~~D~~~~---  176 (335)
                      .++|+|+||||+|  +||.+++++|+++|++|+++.+....+       ..   ...+.+  ....+.++.+|+.++   
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            5678999999995  899999999999999998876432111       00   111111  123577888998764   


Q ss_pred             ---------hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHc-CCeEEEEecccccCCCC
Q 019794          177 ---------ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRV-GAKFLLTSTSEVYGDPL  238 (335)
Q Consensus       177 ---------~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~-~~r~v~iSS~~v~~~~~  238 (335)
                               .+..+|+|||+||.......    .++++..+++|+.+...+.+++    ++. +.+||++||....    
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~----  159 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ----  159 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC----
Confidence                     23458999999986433221    2246678999999999886544    333 2389999997543    


Q ss_pred             CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                                  .+......|+.+|.+.+.+++.++.+   .+++++.++||.+-.+
T Consensus       160 ------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~  204 (256)
T PRK12859        160 ------------GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG  204 (256)
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence                        23344578999999999999998876   4899999999998665

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.8e-15  Score=129.21  Aligned_cols=143  Identities=20%  Similarity=0.254  Sum_probs=109.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vih~A  188 (335)
                      |+++||||+|+||.+++++|+++ ++|++++|+..                .+.+|+.++        .+.++|+|||+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a   63 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA   63 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence            48999999999999999999999 99999988532                234555443        234799999999


Q ss_pred             CCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHH
Q 019794          189 CPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       189 ~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      |.......    .+++.+.+++|+.++.++++++.+.   +.+++++||....                .+......|+.
T Consensus        64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~----------------~~~~~~~~Y~~  127 (199)
T PRK07578         64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD----------------EPIPGGASAAT  127 (199)
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC----------------CCCCCchHHHH
Confidence            86433222    2356778999999999999987653   3479999886542                23334568999


Q ss_pred             HHHHHHHHHHHHHhh--hCCcEEEEEeCceeCC
Q 019794          262 GKRTAETLTMDYHRG--AGVEVRIARIFNTYGP  292 (335)
Q Consensus       262 sK~~~E~l~~~~a~~--~~i~~~ivRp~~v~Gp  292 (335)
                      +|.+.+.+++.++.+  .|++++.+.||.+-.+
T Consensus       128 sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~  160 (199)
T PRK07578        128 VNGALEGFVKAAALELPRGIRINVVSPTVLTES  160 (199)
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEcCCcccCc
Confidence            999999999998886  4899999999988554

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.6e-15  Score=136.12  Aligned_cols=161  Identities=12%  Similarity=0.070  Sum_probs=117.2

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCC-CccccccccCCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|+++||||  +++||.+++++|+++|++|++++|+... ..+.+..... ..+.++.+|+.++            .+
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45789999999  8999999999999999999999875321 1122222222 2566788898765            23


Q ss_pred             cCCCEEEEccCCCCCC----C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~----~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      ..+|++|||||.....    .    ..+++.+.+++|+.++..+++++...   +.++|++|+....             
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-------------  150 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-------------  150 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-------------
Confidence            5699999999975321    1    12345667999999999998887542   3478888754211             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                          +......|+.+|++.+.+++.++.+   .|++++.+.||.+..+
T Consensus       151 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  194 (256)
T PRK07889        151 ----AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL  194 (256)
T ss_pred             ----cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence                1123356999999999999999887   4899999999999765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.2e-15  Score=137.20  Aligned_cols=161  Identities=12%  Similarity=-0.032  Sum_probs=116.4

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++|+++||||  ++.||.+++++|++.|++|++++|......  +.+....  .....+.+|+.++            .
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHHHH
Confidence            45789999996  679999999999999999998876421111  1111111  1223577888765            2


Q ss_pred             ccCCCEEEEccCCCCCC----C-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPV----H-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~----~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +..+|++|||||.....    .     ..+++...+++|+.++..+++++...   +.++|++||....           
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~-----------  150 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE-----------  150 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc-----------
Confidence            35699999999975321    1     12356778999999999998887653   2479999986542           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                           .+......|+.+|++.+.+.+.++.+.   |++++.+.||.|-.+
T Consensus       151 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (260)
T PRK06997        151 -----RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL  195 (260)
T ss_pred             -----cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence                 122334579999999999999998864   899999999998664

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.66  E-value=1.4e-15  Score=134.30  Aligned_cols=157  Identities=17%  Similarity=0.152  Sum_probs=115.9

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------ccCCCEE
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLEVDQI  184 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~vD~V  184 (335)
                      |+|||++|+||++++++|+++|++|++++|.............  ....+.++.+|+.++.            +..+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999886422211111111  1234778888987652            2458999


Q ss_pred             EEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEeccc-ccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSE-VYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~-v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||+||......    ..+.+...+++|+.++.++++.+.+.    +. ++|++||.. .++.                 .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~-----------------~  143 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN-----------------A  143 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-----------------C
Confidence            99999653321    12356778999999999999988652    33 899999954 4432                 2


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ....|+.+|.+.+.+++.++.+   .|+++++++||.+.++
T Consensus       144 ~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~  184 (239)
T TIGR01830       144 GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTD  184 (239)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCCh
Confidence            2357999999999998888765   4899999999988765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.66  E-value=1.3e-15  Score=150.26  Aligned_cols=161  Identities=19%  Similarity=0.211  Sum_probs=121.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++|+++||||+++||.+++++|+++|++|++++|+.....+.....  ...+..+.+|+.++            .+..+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999999999998754333222211  23456788888765            13569


Q ss_pred             CEEEEccCCCCCC------CccCChhhHHhhHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          182 DQIYHLACPASPV------HYKYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       182 D~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      |+||||||...+.      ...+++...+++|+.++..+++++...      +.++|++||....               
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~---------------  145 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL---------------  145 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC---------------
Confidence            9999999863211      122357789999999999999887543      2389999996543               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|++.+.+++.++.+.   +++++.+.||.+..+
T Consensus       146 -~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~  190 (520)
T PRK06484        146 -VALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ  190 (520)
T ss_pred             -CCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence             122334679999999999999998874   899999999988665

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.66  E-value=3.7e-16  Score=142.34  Aligned_cols=163  Identities=17%  Similarity=0.206  Sum_probs=109.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc------cC-CCEEE
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL------LE-VDQIY  185 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~------~~-vD~Vi  185 (335)
                      +|+||||||+||++++++|+++|++|++++|+++....        ..++.+.+|..|+     ++      .+ +|.||
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence            48999999999999999999999999999998654321        2334455565543     44      56 99999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      |+++...      +       ......+++++|++.|+ +||++||..++..                       ...+.
T Consensus        73 ~~~~~~~------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------------~~~~~  116 (285)
T TIGR03649        73 LVAPPIP------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------------GPAMG  116 (285)
T ss_pred             EeCCCCC------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------------CchHH
Confidence            9875311      1       12345689999999998 8999998654310                       00122


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..|.+++.   ..+++++++||+.+|+...    .   ..+...+.+...+. .+.++..++|++++|+|+
T Consensus       117 ~~~~~l~~---~~gi~~tilRp~~f~~~~~----~---~~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~  176 (285)
T TIGR03649       117 QVHAHLDS---LGGVEYTVLRPTWFMENFS----E---EFHVEAIRKENKIY-SATGDGKIPFVSADDIAR  176 (285)
T ss_pred             HHHHHHHh---ccCCCEEEEeccHHhhhhc----c---cccccccccCCeEE-ecCCCCccCcccHHHHHH
Confidence            33444332   1489999999998886431    0   01122233334443 456778899999999974

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.2e-15  Score=137.61  Aligned_cols=165  Identities=13%  Similarity=0.055  Sum_probs=117.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC------c---cccccccC--CCceEEEeccccch------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR------K---DNLVHHFR--NPRFELIRHDVVEP------  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~------~---~~~~~~~~--~~~~~~~~~D~~~~------  176 (335)
                      +++|+++||||+++||.+++++|++.|++|++++|+....      .   +...+.+.  ...+..+.+|+.++      
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            5678999999999999999999999999999999874321      1   11111111  23466788998775      


Q ss_pred             ------hccCCCEEEEcc-CCCC--C--CCc----cCChhhHHhhHHHHHHHHHHHHHH----c-CCeEEEEecccc-cC
Q 019794          177 ------ILLEVDQIYHLA-CPAS--P--VHY----KYNPVKTIKTNVMGTLNMLGLAKR----V-GAKFLLTSTSEV-YG  235 (335)
Q Consensus       177 ------~~~~vD~Vih~A-~~~~--~--~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~~r~v~iSS~~v-~~  235 (335)
                            .+..+|++|||| |...  .  ...    .+++.+.+++|+.++..+++++..    . +.+||++||... +.
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence                  235699999999 6321  0  111    224667889999999998887643    2 248999998543 21


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       236 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .              .+......|+.+|.+...+.+.++.+.   |++++.|.||.|-.+
T Consensus       166 ~--------------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        166 A--------------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             C--------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence            0              011123569999999999999998874   799999999988554

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.65  E-value=4.2e-15  Score=133.86  Aligned_cols=167  Identities=16%  Similarity=0.103  Sum_probs=125.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc----ccCCCceEEEeccccch-----------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH----HFRNPRFELIRHDVVEP-----------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~D~~~~-----------  176 (335)
                      ..+++|+++||||+.+||++++.+|++.|++|++.+|+.+...+....    .....++..+.+|+.++           
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987654332222    12245688899998754           


Q ss_pred             -h-ccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHH-HHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCC
Q 019794          177 -I-LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMG-TLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQK  243 (335)
Q Consensus       177 -~-~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~g-t~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~  243 (335)
                       . +.++|++|+|||......     ..+.|+..+++|+.| ...+..++...    + ..++++||...+..       
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~-------  156 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP-------  156 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC-------
Confidence             2 567999999999765442     233578899999996 55665555332    2 36888888754421       


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                              .......|+.+|.+.+++.+.++.+.   |++++++.||.|..+.
T Consensus       157 --------~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  157 --------GPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             --------CCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence                    11111579999999999999999874   8999999999998874

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.3e-15  Score=131.29  Aligned_cols=161  Identities=18%  Similarity=0.169  Sum_probs=116.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------c--cCCCEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------L--LEVDQIY  185 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~--~~vD~Vi  185 (335)
                      +++++||||+|+||++++++|+++|++|++++|+...... +..   ...+.+..+|+.+..        +  .++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            4689999999999999999999999999999997654321 111   124566777876641        1  2599999


Q ss_pred             EccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHHc---C-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          186 HLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKRV---G-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       186 h~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      |+||......      ..+++...+++|+.++..+++++...   + ..++++||..  +....           .+...
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~-----------~~~~~  143 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL-----------PDGGE  143 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc-----------CCCCC
Confidence            9998753321      12345678899999999998887543   2 3678887742  21100           12223


Q ss_pred             CChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ...|+.+|.+.+.+++.++.+   .+++++.++||.+-.+.
T Consensus       144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            356999999999999999876   37999999999997764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-15  Score=131.34  Aligned_cols=159  Identities=16%  Similarity=0.162  Sum_probs=107.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ..++++++||||+|+||++++++|+++|++|++++|+.........   .. ....+.+|+.+.     .+.++|++|||
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~iDilVnn   86 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND---ES-PNEWIKWECGKEESLDKQLASLDVLILN   86 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc---cC-CCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence            3467899999999999999999999999999999987522111111   11 124566777654     45679999999


Q ss_pred             cCCCCCCC-ccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          188 ACPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       188 A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      ||...... ..+++...+++|+.|+.++++++.+.        +..++..||...+                .+ .....
T Consensus        87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~----------------~~-~~~~~  149 (245)
T PRK12367         87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI----------------QP-ALSPS  149 (245)
T ss_pred             CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc----------------CC-CCCch
Confidence            98643322 23467889999999999999987542        2234444443222                11 12356


Q ss_pred             HHHHHHHHHHHH---HHHHh---hhCCcEEEEEeCceeCC
Q 019794          259 YDEGKRTAETLT---MDYHR---GAGVEVRIARIFNTYGP  292 (335)
Q Consensus       259 Y~~sK~~~E~l~---~~~a~---~~~i~~~ivRp~~v~Gp  292 (335)
                      |+.||++.+.+.   ++++.   ..++.+..+.||.+..+
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~  189 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSE  189 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccc
Confidence            999999976543   22222   24888999999887544

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-15  Score=129.88  Aligned_cols=161  Identities=7%  Similarity=0.009  Sum_probs=115.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hcc-
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILL-  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~-  179 (335)
                      .++++++||||++.||++++++|+++|++|++++|+.+...+...+. .....+..+.+|+.++            .+. 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999998765432222111 0123456677787654            235 


Q ss_pred             CCCEEEEccCCCCCC-Ccc----CChhhHHhhHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPV-HYK----YNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+|++|||||..... ...    +++.+.+++|+.++..+++.+.    +.+  ..+|++||...+              
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------  148 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence            799999999743322 111    2345577889888887766543    332  489999985322              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           .....|+.+|++.+.+.+.++.+   ++++++.|.||.+-.+.
T Consensus       149 -----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 -----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             -----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                 12357999999999999999876   48999999999987763

>PRK05599 hypothetical protein; Provisional

Probab=99.64  E-value=3.8e-15  Score=132.84  Aligned_cols=159  Identities=13%  Similarity=0.124  Sum_probs=114.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------hccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      |+++||||+++||.+++++|+ +|++|++++|+.+...+...+.  .....+.++.+|+.|+            ....+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 5999999998754332221111  1122467888998775            235699


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcC--CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      ++|||||.......    ..++.+.+++|+.+...++..+    .+.+  .++|++||...+                .+
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------------~~  143 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW----------------RA  143 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc----------------cC
Confidence            99999997543221    1224466788988887666543    3332  489999997543                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+.+.++.+.   |++++.+.||.+..+
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~  186 (246)
T PRK05599        144 RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS  186 (246)
T ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence            2334679999999999999998863   799999999999765

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.63  E-value=1.3e-15  Score=125.84  Aligned_cols=191  Identities=16%  Similarity=0.066  Sum_probs=138.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .+.+.++||||+.+||++|+..|.+.|++|.+.+++....++.....-....-..+.+|+.++            .+..+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            456789999999999999999999999999999998665444444333334555677777654            23569


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc-------CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV-------GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~-------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +++++|||+.....    ..++|.+.+.+|+.|++.+.+++.+.       +.++|++||+----               
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki---------------  156 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI---------------  156 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc---------------
Confidence            99999999765432    34579999999999999998887554       23799999963211               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCce
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQT  324 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~  324 (335)
                       ---....|+.+|...--+.+.+++|   .+|+++++-||+|-.|-    ...+.+..++.+...-|+-.+|+.+..
T Consensus       157 -GN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpM----T~~mp~~v~~ki~~~iPmgr~G~~Eev  228 (256)
T KOG1200|consen  157 -GNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPM----TEAMPPKVLDKILGMIPMGRLGEAEEV  228 (256)
T ss_pred             -ccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChh----hhhcCHHHHHHHHccCCccccCCHHHH
Confidence             0112245888887666555555554   38999999999998874    244556777888887777777776544

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.62  E-value=4.5e-15  Score=133.08  Aligned_cols=159  Identities=14%  Similarity=0.042  Sum_probs=115.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHh----CCCeEEEEecCCCCCccccccc---cCCCceEEEeccccchh--------c----
Q 019794          118 RIVVTGGAGFVGSHLVDKLID----RGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPI--------L----  178 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~----~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~--------~----  178 (335)
                      +++||||+++||.+++++|++    .|++|++++|+.....+...+.   .....+.++.+|+.+..        +    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999754332221111   12236788889987651        1    


Q ss_pred             c----CCCEEEEccCCCCCCC--c-----cCChhhHHhhHHHHHHHHHHHHHH----c-C--CeEEEEecccccCCCCCC
Q 019794          179 L----EVDQIYHLACPASPVH--Y-----KYNPVKTIKTNVMGTLNMLGLAKR----V-G--AKFLLTSTSEVYGDPLEH  240 (335)
Q Consensus       179 ~----~vD~Vih~A~~~~~~~--~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~--~r~v~iSS~~v~~~~~~~  240 (335)
                      .    +.|+||||||......  .     .+++...+++|+.++..+.+.+.+    . +  .++|++||...+      
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~------  155 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI------  155 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC------
Confidence            1    1369999998643211  1     134678999999999888876643    2 2  379999997554      


Q ss_pred             CCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                                .+......|+.+|.+.+.+++.++.+.   |++++.+.||.|-.+
T Consensus       156 ----------~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~  200 (256)
T TIGR01500       156 ----------QPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD  200 (256)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence                      233344689999999999999998773   799999999998654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.61  E-value=2e-14  Score=120.40  Aligned_cols=157  Identities=15%  Similarity=0.126  Sum_probs=113.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc--cc--cCCCceEEEeccccchh------------cc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV--HH--FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~--~~--~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ++++||||+|+||.+++++|+++|. .|+++.|+.........  ..  ....++.++.+|+.++.            ..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997 67888776443221110  11  11246677888886641            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      .+|.|||+||.......    .+++...+++|+.++.++++++++.+. ++|++||....                .+..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~----------------~~~~  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGV----------------LGNP  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHh----------------cCCC
Confidence            47999999986433221    234677899999999999999977664 78998885442                1122


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCcee
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY  290 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~  290 (335)
                      ....|+.+|...+.+++.+. ..+++++.+.||.+-
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      145 GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence            34579999999999997654 468999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=1.3e-14  Score=140.81  Aligned_cols=160  Identities=15%  Similarity=0.087  Sum_probs=117.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++++++||||+|+||.++++.|+++|++|+++++....  +.+...........+.+|+.++.            ...+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999874321  11111111122356777876641            2369


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||......    ..+.+...+++|+.++.++++++...     +.+||++||...+.                +
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~----------------g  349 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA----------------G  349 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC----------------C
Confidence            99999999654322    22346778999999999999998663     24899999975541                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~G  291 (335)
                      ......|+.+|...+.+++.++.+   .+++++++.||.+-.
T Consensus       350 ~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t  391 (450)
T PRK08261        350 NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET  391 (450)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence            123467999999999999888765   489999999998754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.60  E-value=1e-14  Score=121.83  Aligned_cols=144  Identities=18%  Similarity=0.203  Sum_probs=109.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC-CCCccccccc--cCCCceEEEeccccch------------hccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF-TGRKDNLVHH--FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      |+++||||++.||.+++++|+++|. .|+++.|+. ....+.+...  ....++.++.+|+.++            ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5899999999999999999999965 778887761 1111111111  1236788999998765            2356


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      +|+||||||........    +++.+.+++|+.+...+.+++...+. ++|++||....                .+...
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~----------------~~~~~  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV----------------RGSPG  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT----------------SSSTT
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc----------------cCCCC
Confidence            99999999976644332    24678999999999999999888444 89999997664                34455


Q ss_pred             CChHHHHHHHHHHHHHHHHhh
Q 019794          256 RSCYDEGKRTAETLTMDYHRG  276 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~  276 (335)
                      ...|+.+|++.+.+++.+++|
T Consensus       145 ~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHh
Confidence            678999999999999999876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN00015 protochlorophyllide reductase

Probab=99.60  E-value=1.6e-14  Score=133.27  Aligned_cols=174  Identities=13%  Similarity=0.112  Sum_probs=115.3

Q ss_pred             EEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCCCEEE
Q 019794          120 VVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEVDQIY  185 (335)
Q Consensus       120 lVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~vD~Vi  185 (335)
                      +||||+++||.+++++|+++| ++|++++|+.....+..... .....+.++.+|+.+..            ...+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 89999988654322111111 11235777888887651            24689999


Q ss_pred             EccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcC---CeEEEEecccccCCCC-C--CC---C-----
Q 019794          186 HLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVG---AKFLLTSTSEVYGDPL-E--HP---Q-----  242 (335)
Q Consensus       186 h~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~---~r~v~iSS~~v~~~~~-~--~~---~-----  242 (335)
                      ||||......     ..+.+...+++|+.|+..+++++.    +.+   .++|++||...+-... .  .+   .     
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            9999743211     123567899999999888877653    333   4899999975531100 0  00   0     


Q ss_pred             -----C-C--CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCCC
Q 019794          243 -----K-E--TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 -----~-E--~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp~  293 (335)
                           + +  ..+.+.....+...|+.||++.+.+.+.++++    .|++++.+.||.|....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  223 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTG  223 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcc
Confidence                 0 0  00000112234567999999977777777765    37999999999996543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.59  E-value=7.5e-14  Score=132.27  Aligned_cols=158  Identities=18%  Similarity=0.150  Sum_probs=107.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+.+........  ....+..+.+|+.++     .+.++|++|||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            45788999999999999999999999999999999865432211111  112356777887765     35789999999


Q ss_pred             cCCCCCCC-ccCChhhHHhhHHHHHHHHHHHHHH----cC----C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          188 ACPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKR----VG----A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       188 A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~----~~----~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ||...... ..+++.+.+++|+.|+.++++++.+    .+    . .+|++|++..                 .+ ....
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-----------------~~-~~~~  314 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-----------------NP-AFSP  314 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-----------------cC-CCch
Confidence            98643322 2235678999999999999998743    22    1 2445544221                 11 1124


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCcee
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY  290 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~  290 (335)
                      .|+.||++.+.+......+.++.+..+.||.+.
T Consensus       315 ~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~  347 (406)
T PRK07424        315 LYELSKRALGDLVTLRRLDAPCVVRKLILGPFK  347 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCc
Confidence            699999999987643333446667777776654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.59  E-value=4.7e-14  Score=129.20  Aligned_cols=164  Identities=15%  Similarity=0.077  Sum_probs=112.9

Q ss_pred             CCCCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCCCccc---cc-----c--ccCC----CceEEEecccc-
Q 019794          112 IGRRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LV-----H--HFRN----PRFELIRHDVV-  174 (335)
Q Consensus       112 ~~~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~-----~--~~~~----~~~~~~~~D~~-  174 (335)
                      ..+++|+++||||  +.+||.++++.|++.|++|++ .|.....+..   ..     +  ....    .....+.+|+. 
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3478999999999  799999999999999999988 5532211100   00     0  0000    01234444541 


Q ss_pred             -------c--------------h----------hccCCCEEEEccCCCCC--CC----ccCChhhHHhhHHHHHHHHHHH
Q 019794          175 -------E--------------P----------ILLEVDQIYHLACPASP--VH----YKYNPVKTIKTNVMGTLNMLGL  217 (335)
Q Consensus       175 -------~--------------~----------~~~~vD~Vih~A~~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~~  217 (335)
                             +              .          .+..+|++|||||....  ..    ..+++...+++|+.++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence                   1              1          23569999999974321  11    2346788999999999999988


Q ss_pred             HHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCce
Q 019794          218 AKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNT  289 (335)
Q Consensus       218 a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v  289 (335)
                      +...   +.++|++||....                .+.... ..|+.+|.+.+.+.+.++.+.    |++++.|.||.+
T Consensus       164 ~~p~m~~~G~II~isS~a~~----------------~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v  227 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASE----------------RIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL  227 (303)
T ss_pred             HHHHHhcCCEEEEEechhhc----------------CCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc
Confidence            7553   3589999986543                111212 369999999999999999763    699999999998


Q ss_pred             eCC
Q 019794          290 YGP  292 (335)
Q Consensus       290 ~Gp  292 (335)
                      -.+
T Consensus       228 ~T~  230 (303)
T PLN02730        228 GSR  230 (303)
T ss_pred             cCc
Confidence            665

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.59  E-value=7e-14  Score=123.53  Aligned_cols=157  Identities=17%  Similarity=0.151  Sum_probs=112.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vih  186 (335)
                      |+|+||||+|+||++++++|+++|  ..|...+|+....       ....++.++.+|+.+.        .+.++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            589999999999999999999986  4565555543211       1234677888998765        2457999999


Q ss_pred             ccCCCCCCC------cc----CChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          187 LACPASPVH------YK----YNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       187 ~A~~~~~~~------~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |||......      ..    +.+...+++|+.++..+++.+...    + .+++++||...  ....           .
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~~~-----------~  140 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SISD-----------N  140 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cccc-----------C
Confidence            999754211      11    235578999999999888877542    2 37888887321  1000           1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|++.+.+++.++.+     .+++++.+.||.+..+.
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~  187 (235)
T PRK09009        141 RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL  187 (235)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence            2223457999999999999999866     37999999999997764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=4.9e-14  Score=128.97  Aligned_cols=179  Identities=17%  Similarity=0.102  Sum_probs=131.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---cccccCCCceEEEeccccch------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEP------------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~------------  176 (335)
                      ....+++++|||||++||.+++++|+.+|.+|+...|+.....+.   +........+.++.+|+.+.            
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            345668999999999999999999999999999999987433222   22334566788899999765            


Q ss_pred             hccCCCEEEEccCCCCCCCc--cCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccc-cCCCCCCCCCCCcCC
Q 019794          177 ILLEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEV-YGDPLEHPQKETYWG  248 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~--~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v-~~~~~~~~~~E~~~~  248 (335)
                      .....|++|+|||.+.....  .+..+..+.+|..|+..+.+++    +... .|+|++||..- ..........|..  
T Consensus       111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~--  188 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKA--  188 (314)
T ss_pred             cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhc--
Confidence            23459999999998776652  3357889999999999887765    3333 59999999643 1111111111210  


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~~  294 (335)
                        ........|+.||.+...+..++++..  |+.++.+.||.+.+++.
T Consensus       189 --~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  189 --KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             --cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence              112333469999999999999998765  79999999999988754

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=9.1e-14  Score=116.08  Aligned_cols=160  Identities=18%  Similarity=0.196  Sum_probs=121.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      ..|-+||||||+.+||.+++++|++.|.+|++..|+.....+...   ..+.+....+|+.|..            ....
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh---cCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            456699999999999999999999999999999997655444333   2356667777776642            2348


Q ss_pred             CEEEEccCCCCCCCcc------CChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          182 DQIYHLACPASPVHYK------YNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +++|||||+....++.      ++..+-+.+|+.++..+..+...+     .+-+|.+||.-.|                
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf----------------  143 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF----------------  143 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc----------------
Confidence            9999999976554433      234567889999999998876543     2469999997666                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .|......|+.+|++...+...+...   .++++.-+-|+.|--+
T Consensus       144 vPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 VPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             CcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            45555567999999998877766533   4899999999999875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.54  E-value=1.9e-14  Score=122.06  Aligned_cols=157  Identities=22%  Similarity=0.220  Sum_probs=121.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      ...||++++|||.|+||.+++++|+++|..+.+++.+.+..+  ..+....+...+-++.+|+++.            .+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999998877776655432  2344555677899999999774            34


Q ss_pred             cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHH----HH-cC---CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----KR-VG---AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a----~~-~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|++||+||...    +.+++..+.+|+.|..|-..++    .+ .|   .-+|++||....                
T Consensus        82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL----------------  141 (261)
T KOG4169|consen   82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL----------------  141 (261)
T ss_pred             CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc----------------
Confidence            66999999998754    4579999999998866654443    32 22   259999996443                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHh-----hhCCcEEEEEeCce
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHR-----GAGVEVRIARIFNT  289 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~-----~~~i~~~ivRp~~v  289 (335)
                      +|......|+.||+..-.+.+.++.     +.|+++..+.||.+
T Consensus       142 ~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t  185 (261)
T KOG4169|consen  142 DPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT  185 (261)
T ss_pred             CccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence            5666667899999998888888664     35999999999986

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.54  E-value=2e-13  Score=121.72  Aligned_cols=161  Identities=17%  Similarity=0.132  Sum_probs=117.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC-cccccccc--CC-CceEEEeccccc-h------------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHF--RN-PRFELIRHDVVE-P------------  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~--~~-~~~~~~~~D~~~-~------------  176 (335)
                      .++|+|+||||+++||.+++++|++.|+.|+++.+..... .+......  .. ..+.....|+.+ .            
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999988888764431 11111110  11 356667788876 3            


Q ss_pred             hccCCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          177 ILLEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+..+|++|||||..... .    ..+.+...+++|+.|...+.+++...-.  ++|++||.... ..            
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~------------  149 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG------------  149 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC------------
Confidence            234599999999975431 2    2246788999999999998886554444  89999997653 21            


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeC
Q 019794          250 VNPIGE-RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (335)
Q Consensus       250 ~~~~~~-~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~G  291 (335)
                          .. ...|+.||++.+.+.+.++.+   .|++++.+.||.+-.
T Consensus       150 ----~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t  191 (251)
T COG1028         150 ----PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT  191 (251)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence                11 367999999999999999865   489999999995543

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=1.4e-12  Score=119.38  Aligned_cols=165  Identities=12%  Similarity=0.015  Sum_probs=110.7

Q ss_pred             CCCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCC---------CCCcc-ccccc---------------cCCC
Q 019794          112 IGRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFF---------TGRKD-NLVHH---------------FRNP  164 (335)
Q Consensus       112 ~~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~---------~~~~~-~~~~~---------------~~~~  164 (335)
                      ..+++|+++||||+  .+||++++++|+++|++|++.++.+         +..+. .....               ....
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            34678999999995  8999999999999999999976431         00000 00000               0001


Q ss_pred             ceEEEeccccc--------------------hhccCCCEEEEccCCCCC--CC----ccCChhhHHhhHHHHHHHHHHHH
Q 019794          165 RFELIRHDVVE--------------------PILLEVDQIYHLACPASP--VH----YKYNPVKTIKTNVMGTLNMLGLA  218 (335)
Q Consensus       165 ~~~~~~~D~~~--------------------~~~~~vD~Vih~A~~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~~a  218 (335)
                      ..+-+..|+.+                    ..+..+|++|||||....  ..    ..++++..+++|+.|+.++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            12222222211                    123569999999985321  11    12357889999999999999987


Q ss_pred             HHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCcee
Q 019794          219 KRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTY  290 (335)
Q Consensus       219 ~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v~  290 (335)
                      ...   +.++|++||....                .+.... ..|+.+|.+.+.+++.++.+.    |++++.|.||.+.
T Consensus       164 ~p~m~~~G~ii~iss~~~~----------------~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~  227 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASM----------------RAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLA  227 (299)
T ss_pred             HHHhhcCCeEEEEeehhhc----------------CcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCcc
Confidence            653   3478999885443                111122 269999999999999998762    7999999999986


Q ss_pred             CC
Q 019794          291 GP  292 (335)
Q Consensus       291 Gp  292 (335)
                      .+
T Consensus       228 T~  229 (299)
T PRK06300        228 SR  229 (299)
T ss_pred             Ch
Confidence            65

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.49  E-value=2.3e-13  Score=115.82  Aligned_cols=206  Identities=21%  Similarity=0.258  Sum_probs=141.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEecCCCCCccccccccCCCceEEEeccccch-----hc--cCCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL--LEVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~--~~vD~Vi  185 (335)
                      +..+||||||-|.+|..+++.|..+ |. .|+..+..  +..+...+.   .  -++-.|+.|.     ..  ..+|.+|
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~--KPp~~V~~~---G--PyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIV--KPPANVTDV---G--PYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhcc--CCchhhccc---C--CchhhhhhccccHHHhhcccccceee
Confidence            3448999999999999999888665 55 45544332  111111111   1  1333444432     22  3489999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCC-CCCCCcCCCCCCCCCCChHHHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH-PQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~-~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      |..+.-.. .-+.+.....++|+.|..|+++.|++.+-+++.-|++.+||..... +..     ++.-..|...||.||.
T Consensus       116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTP-----dltIQRPRTIYGVSKV  189 (366)
T KOG2774|consen  116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTP-----DLTIQRPRTIYGVSKV  189 (366)
T ss_pred             eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCC-----CeeeecCceeechhHH
Confidence            97653221 1233455567899999999999999999899999999999864321 211     1133456789999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC-CCcchHHHHHHHHHhCCCeEEecCCCceeeceecccc
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCL-DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL  333 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~-~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dv  333 (335)
                      .+|.+-+.+..++|+++.++|++.+....... ..+..-...+..++++++.+.+-.++....++|.+|+
T Consensus       190 HAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc  259 (366)
T KOG2774|consen  190 HAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDC  259 (366)
T ss_pred             HHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHH
Confidence            99999999888899999999998888753211 1233444556666777777777788888899999986

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.49  E-value=3.2e-14  Score=125.75  Aligned_cols=176  Identities=20%  Similarity=0.260  Sum_probs=113.1

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPASP  193 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~~~  193 (335)
                      |+||||||.+|+.+++.|++.+++|.++.|+..+..   ...+....++++.+|..++     ++.++|.||.+.+... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~---~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR---AQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH---HHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh---hhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence            799999999999999999999999999999863211   1122234567788888654     6889999998876432 


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc-cccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD  272 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~-~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~  272 (335)
                                 ..-+....+++++|++.|++.+..||. ..+..        .     ....+...+...|...|+.+++
T Consensus        77 -----------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~--------~-----~~~~p~~~~~~~k~~ie~~l~~  132 (233)
T PF05368_consen   77 -----------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDE--------S-----SGSEPEIPHFDQKAEIEEYLRE  132 (233)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTT--------T-----TTSTTHHHHHHHHHHHHHHHHH
T ss_pred             -----------hhhhhhhhhHHHhhhccccceEEEEEecccccc--------c-----ccccccchhhhhhhhhhhhhhh
Confidence                       244566779999999999944445553 33210        0     0111223345678888877755


Q ss_pred             HHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHH-HHhC--CCeEEecCCCceeece-eccccc
Q 019794          273 YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQ-AIRR--QPMTVYGDGKQTRSFQ-YVSDLV  334 (335)
Q Consensus       273 ~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~-~~~~--~~~~~~g~g~~~~~~v-~v~Dva  334 (335)
                          .+++++++|+|..+...        +..+... ..++  ..+.+.++++....++ ..+|++
T Consensus       133 ----~~i~~t~i~~g~f~e~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg  186 (233)
T PF05368_consen  133 ----SGIPYTIIRPGFFMENL--------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVG  186 (233)
T ss_dssp             ----CTSEBEEEEE-EEHHHH--------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHH
T ss_pred             ----ccccceeccccchhhhh--------hhhhcccccccccceEEEEccCCCccccccccHHHHH
Confidence                49999999999765421        1111110 1122  2367778887666675 888876

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.47  E-value=2.1e-13  Score=121.21  Aligned_cols=154  Identities=21%  Similarity=0.227  Sum_probs=116.8

Q ss_pred             cCC--chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hc-cCCCEEEEc
Q 019794          123 GGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------IL-LEVDQIYHL  187 (335)
Q Consensus       123 Gat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~-~~vD~Vih~  187 (335)
                      |++  ++||.+++++|+++|++|++++|+.+.....+.........+++.+|+.++            .+ ..+|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            667  999999999999999999999998765322232222222244699999765            35 779999999


Q ss_pred             cCCCCC----CCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          188 ACPASP----VHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       188 A~~~~~----~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      ++....    ..+    .+++...+++|+.+...+++++.+.   +.++|++||....                .+....
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~----------------~~~~~~  144 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQ----------------RPMPGY  144 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGT----------------SBSTTT
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhc----------------ccCccc
Confidence            987554    221    2356789999999999999988553   3479999987553                233444


Q ss_pred             ChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCC
Q 019794          257 SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp  292 (335)
                      ..|+.+|++.+.+++.++.+    +||++++|.||.+..+
T Consensus       145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~  184 (241)
T PF13561_consen  145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP  184 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence            68999999999999999865    4899999999998765

...

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.45  E-value=2.2e-12  Score=114.97  Aligned_cols=161  Identities=19%  Similarity=0.148  Sum_probs=122.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhc--------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--------------L  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------------~  179 (335)
                      ..+|.|||||.-.+.|..++++|.++|..|.+-...++..+ .+......++...+..|++++..              .
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae-~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE-SLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH-HHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            44568999999999999999999999999998885443322 23333336788888999987621              2


Q ss_pred             CCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLA----KRVGAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +.-.||||||+.....     ..+++...+++|+.|+..+..+.    ++...|+|++||...-                
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR----------------  169 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR----------------  169 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC----------------
Confidence            4789999999543322     12367889999999988877664    5566799999997542                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .+.+...+|+.||.+.|.+...+..|   +|+++.++-|| +|-.
T Consensus       170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T  213 (322)
T KOG1610|consen  170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT  213 (322)
T ss_pred             ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence            34455678999999999999988877   59999999999 4443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.45  E-value=4.6e-13  Score=112.40  Aligned_cols=157  Identities=17%  Similarity=0.129  Sum_probs=116.0

Q ss_pred             CCCeEEEEcC-CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-------------hccC
Q 019794          115 RRLRIVVTGG-AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGa-tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~~  180 (335)
                      +.++|+|||+ .|+||.+++++|.+.|+.|++..|..+...+..    ....+.....|+.++             ....
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~----~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA----IQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH----HhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            4568888875 589999999999999999999998655433221    122355666666554             2345


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      .|++|||||.......-    ..-++.+++|+.|..++.++..    +.+..+|++.|..+|                -|
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~----------------vp  145 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV----------------VP  145 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE----------------ec
Confidence            89999999965443321    2356789999999988888764    334489999998776                45


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~G  291 (335)
                      +.-.+.|.+||++...+.+.+..|   +|++++.+-+|.|-.
T Consensus       146 fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  146 FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            555578999999999988887755   489999888887754

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.43  E-value=3.2e-13  Score=115.66  Aligned_cols=213  Identities=26%  Similarity=0.311  Sum_probs=152.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc-cccccC------CCceEEEeccccchh-------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHFR------NPRFELIRHDVVEPI-------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-~~~~~~------~~~~~~~~~D~~~~~-------~~  179 (335)
                      ...|..||||-||.=|++|++-|+.+|++|..+.|..+..... ..+.+.      ...+.+.-+|++|..       ..
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            3456899999999999999999999999999999876654322 222222      245777888998862       24


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC----CeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      +++-|+|+|+..+...+.+-++..-++...||+.++++.+..+    +||...||+..||.....|..|.     .|+-|
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TPFyP  180 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TPFYP  180 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CCCCC
Confidence            6899999998777666666677777899999999999987764    58999999999999888999998     89999


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHH----HHHHHHh-CCCeEEecCCCceeeceec
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN----FVAQAIR-RQPMTVYGDGKQTRSFQYV  330 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~----~~~~~~~-~~~~~~~g~g~~~~~~v~v  330 (335)
                      .++|+.+|..+-=++..|.+.+++=.+---..+--.|+.   ...++..    -+..+.- +..-...|+-+..|||-|.
T Consensus       181 RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRR---GenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  181 RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRR---GENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcc---ccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence            999999998766666555555544333222222223332   2233333    3333332 3334445888889999988


Q ss_pred             cccc
Q 019794          331 SDLV  334 (335)
Q Consensus       331 ~Dva  334 (335)
                      .|-+
T Consensus       258 ~dYV  261 (376)
T KOG1372|consen  258 GDYV  261 (376)
T ss_pred             HHHH
Confidence            7754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=3.7e-12  Score=118.76  Aligned_cols=166  Identities=20%  Similarity=0.173  Sum_probs=105.5

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hc----
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------IL----  178 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~----  178 (335)
                      +.....+.++|+|+||||.+|+-+++.|+++|+.|++++|+.......+...........+..+...+      ..    
T Consensus        72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc
Confidence            33445567799999999999999999999999999999998765544433111122222222222211      11    


Q ss_pred             cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ....+++-+++-  ....+ +...-+++...|+.|++++|+..|+ +++++|++..-..+.      ..    .......
T Consensus       152 ~~~~~v~~~~gg--rp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~------~~----~~~~~~~  218 (411)
T KOG1203|consen  152 KGVVIVIKGAGG--RPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ------PP----NILLLNG  218 (411)
T ss_pred             ccceeEEecccC--CCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC------Cc----hhhhhhh
Confidence            123455555542  22221 2223346889999999999999998 899998875431110      00    0000023


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG  291 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~G  291 (335)
                      .+-..|..+|++++    +.|+++++||++...-
T Consensus       219 ~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  219 LVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             hhhHHHHhHHHHHH----hcCCCcEEEecccccc
Confidence            45577888888775    4699999999987654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.39  E-value=2.4e-13  Score=110.55  Aligned_cols=161  Identities=17%  Similarity=0.150  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc---cCCCEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL---LEVDQI  184 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~vD~V  184 (335)
                      ...|++|++||+.-+||+.++.+|.+.|.+|+++.|.+........+  ....+..+.+|+.+.     .+   .-+|.+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--TPSLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--CCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence            45788999999999999999999999999999999865433222221  122367777887553     22   238999


Q ss_pred             EEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +||||......+    .++.+..|++|+.+..++.+...+.    +  ..+|++||....                .++.
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~----------------R~~~  145 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI----------------RPLD  145 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc----------------cccC
Confidence            999997544333    2356778999999999888874332    2  259999996543                5677


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      ..+.|+.+|++.+.+.+.++.|.   .|++..+.|..|..
T Consensus       146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT  185 (245)
T KOG1207|consen  146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMT  185 (245)
T ss_pred             CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEe
Confidence            77899999999999999999886   59999999988864

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.36  E-value=4.6e-12  Score=112.62  Aligned_cols=148  Identities=16%  Similarity=0.151  Sum_probs=105.6

Q ss_pred             HHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc----cCCCEEEEccCCCCCCCccCChhh
Q 019794          132 LVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL----LEVDQIYHLACPASPVHYKYNPVK  202 (335)
Q Consensus       132 l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~----~~vD~Vih~A~~~~~~~~~~~~~~  202 (335)
                      ++++|+++|++|++++|+.....          ...++.+|+.+.     .+    .++|+||||||...    ..++..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~~   66 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVEL   66 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHHH
Confidence            47899999999999998754321          123566777654     11    36999999998642    246788


Q ss_pred             HHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC-----------cCCCCCCCCCCChHHHHHHHHHH
Q 019794          203 TIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKET-----------YWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       203 ~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~-----------~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      .+++|+.++..+++++.+.   +.+||++||...|+.....+..|.           .|....+......|+.+|.+.+.
T Consensus        67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            9999999999999998753   348999999888753221111110           00000234455789999999999


Q ss_pred             HHHHHH-hh---hCCcEEEEEeCceeCCC
Q 019794          269 LTMDYH-RG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       269 l~~~~a-~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +.+.++ .+   .|+++++++||.+.++-
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence            999888 43   48999999999998874

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.36  E-value=2.5e-11  Score=109.44  Aligned_cols=173  Identities=21%  Similarity=0.196  Sum_probs=114.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|+||||||++|++++++|+++|++|+++.|+++......      ..+++...|+.+.     .+.++|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            58999999999999999999999999999999755433221      6778888888775     568899999887532


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      . ..    . ...........+..+.+. .+. +++++|.....                  ......|..+|..+|..+
T Consensus        75 ~-~~----~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~------------------~~~~~~~~~~~~~~e~~l  129 (275)
T COG0702          75 D-GS----D-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD------------------AASPSALARAKAAVEAAL  129 (275)
T ss_pred             c-cc----c-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC------------------CCCccHHHHHHHHHHHHH
Confidence            2 11    1 222333444444444443 223 67777765431                  123367999999999998


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHH-HHhCCCeEEecCCCceeeceeccccc
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQ-AIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~-~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ..    .+++++++|+..+|....        ..+... ...+.++...+.+  ..+++..+|++
T Consensus       130 ~~----sg~~~t~lr~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a  180 (275)
T COG0702         130 RS----SGIPYTTLRRAAFYLGAG--------AAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVA  180 (275)
T ss_pred             Hh----cCCCeEEEecCeeeeccc--------hhHHHHHHhhCCceecCCCC--ceeeeEHHHHH
Confidence            65    599999999766665432        111323 3334444433443  66788888875

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.36  E-value=7.9e-12  Score=111.23  Aligned_cols=161  Identities=20%  Similarity=0.182  Sum_probs=121.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc---cCCCceEEEeccccch--------h----ccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEP--------I----LLEV  181 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~--------~----~~~v  181 (335)
                      .+|+||||+.+||.+++.++..+|++|.++.|+.++..+...+.   .....+.+..+|+.|-        .    ...+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            48999999999999999999999999999999866544332221   1222356777777332        1    2358


Q ss_pred             CEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHcC---C---eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVG---A---KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~---~---r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |.+|||||..-+..+.+    ..+..+++|..|+.|+++++...-   .   +|+++||...-                -
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~----------------~  177 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM----------------L  177 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh----------------c
Confidence            99999999766665544    246789999999999999875431   1   78888885432                3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ++...+.|+.+|.+...+...+.+|   +++.++..-|+.+-.|+
T Consensus       178 ~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG  222 (331)
T KOG1210|consen  178 GIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG  222 (331)
T ss_pred             CcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence            5666788999999988888887776   48999999999998886

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.35  E-value=2.1e-11  Score=103.65  Aligned_cols=163  Identities=18%  Similarity=0.081  Sum_probs=113.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEE-EEecCCCCCcccccc-ccCCCceEEEeccccchh--------------c
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVI-VIDNFFTGRKDNLVH-HFRNPRFELIRHDVVEPI--------------L  178 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~-~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~--------------~  178 (335)
                      .+.|+||||+.+||..|+++|++. |.+++ ...|+++....++.. .....++.+++.|+++..              .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            456999999999999999999987 44554 445545543222221 124678999999987651              3


Q ss_pred             cCCCEEEEccCCCCCCCccC-----ChhhHHhhHHHHHHHHHHHH----HHcC------------CeEEEEecccccCCC
Q 019794          179 LEVDQIYHLACPASPVHYKY-----NPVKTIKTNVMGTLNMLGLA----KRVG------------AKFLLTSTSEVYGDP  237 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a----~~~~------------~r~v~iSS~~v~~~~  237 (335)
                      .++|++|+|||.........     .+...+++|..|+..+.+.+    ++..            +.+|++||...- . 
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s-~-  160 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS-I-  160 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc-c-
Confidence            46899999999765544322     25678999999988877654    2111            248889885332 0 


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      ..           ....+..+|.+||.+...+.+.++-+.   ++-++.+.||+|--
T Consensus       161 ~~-----------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T  206 (249)
T KOG1611|consen  161 GG-----------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT  206 (249)
T ss_pred             CC-----------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence            00           223455789999999999999888653   78899999999964

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.34  E-value=4.6e-11  Score=98.34  Aligned_cols=156  Identities=15%  Similarity=0.168  Sum_probs=110.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |||.|.||||.+|+.|+++.+++||+|++++|++.+....       ..+.+++.|++|.     .+.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            6899999999999999999999999999999986654321       3455667777664     568899999876542


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecc-cccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~-~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .+     +..   ....+....+++..+..++ |++.++.+ +.|-++....  .+     .|.-|...|...+..+|.+
T Consensus        74 ~~-----~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rL--vD-----~p~fP~ey~~~A~~~ae~L  138 (211)
T COG2910          74 AS-----DND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRL--VD-----TPDFPAEYKPEALAQAEFL  138 (211)
T ss_pred             CC-----Chh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCcee--ec-----CCCCchhHHHHHHHHHHHH
Confidence            21     111   1333446678888888787 89998874 4443333111  11     3445556688888888865


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMC  295 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~  295 (335)
                       ..+..+.+++|+-+.|...|-|++.
T Consensus       139 -~~Lr~~~~l~WTfvSPaa~f~PGer  163 (211)
T COG2910         139 -DSLRAEKSLDWTFVSPAAFFEPGER  163 (211)
T ss_pred             -HHHhhccCcceEEeCcHHhcCCccc
Confidence             4455566799999999999999754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.33  E-value=1.9e-11  Score=136.73  Aligned_cols=162  Identities=17%  Similarity=0.061  Sum_probs=120.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCc---------------------------------------
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRK---------------------------------------  154 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~---------------------------------------  154 (335)
                      +++++|||||+++||.+++++|+++ |++|++++|+.....                                       
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 689999999721000                                       


Q ss_pred             ----cc----cccc-cCCCceEEEeccccchh-----------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHH
Q 019794          155 ----DN----LVHH-FRNPRFELIRHDVVEPI-----------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMG  210 (335)
Q Consensus       155 ----~~----~~~~-~~~~~~~~~~~D~~~~~-----------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~g  210 (335)
                          .+    +... .....+.++.+|++|..           ...+|.|||+||.......    .+++...+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                00    0000 01135778899998751           1259999999997544332    23577899999999


Q ss_pred             HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh-CCcEEEEEeCc
Q 019794          211 TLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFN  288 (335)
Q Consensus       211 t~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~ivRp~~  288 (335)
                      +.++++++..... +||++||...+-                .......|+.+|...+.+.+.++.+. +++++.+.||.
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~----------------G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~ 2219 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFY----------------GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGP 2219 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcC----------------CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCe
Confidence            9999999877654 799999965431                11234679999999999998888765 68999999998


Q ss_pred             eeCC
Q 019794          289 TYGP  292 (335)
Q Consensus       289 v~Gp  292 (335)
                      +-|.
T Consensus      2220 wdtg 2223 (2582)
T TIGR02813      2220 WDGG 2223 (2582)
T ss_pred             ecCC
Confidence            8664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.31  E-value=9.8e-12  Score=105.61  Aligned_cols=191  Identities=17%  Similarity=0.144  Sum_probs=130.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc-ccCCCceEEEeccccchhccCCCEEEEccCCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH-HFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH  195 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~  195 (335)
                      .+.++.|+.||.|+++++.....++.|.++.++..+.....+. ....-..+.+..+.++..+.++..++.+++-+.   
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg---  129 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG---  129 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc---
Confidence            4789999999999999999999999999999875533222211 111123344455556677888999998887433   


Q ss_pred             ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019794          196 YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH  274 (335)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a  274 (335)
                         +...+.++|-+...+-.+++.+.|+ +|+|||-.. ||.              .+..+ .+|-.+|+.+|..+..  
T Consensus       130 ---n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~--------------~~~i~-rGY~~gKR~AE~Ell~--  188 (283)
T KOG4288|consen  130 ---NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL--------------PPLIP-RGYIEGKREAEAELLK--  188 (283)
T ss_pred             ---chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC--------------CCccc-hhhhccchHHHHHHHH--
Confidence               5667778999999999999999998 899999642 221              23333 4899999999998765  


Q ss_pred             hhhCCcEEEEEeCceeCCCCCCCCcchHH---HHHHHHHhC-----CCeEEecCCCceeeceeccccc
Q 019794          275 RGAGVEVRIARIFNTYGPRMCLDDGRVVS---NFVAQAIRR-----QPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       275 ~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~---~~~~~~~~~-----~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                       .++.+-+++|||++||.+.-......+.   .-+..+.+.     .++++.|+  .....|.+++||
T Consensus       189 -~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~--l~~ppvnve~VA  253 (283)
T KOG4288|consen  189 -KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGP--LLAPPVNVESVA  253 (283)
T ss_pred             -hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccc--ccCCCcCHHHHH
Confidence             4578999999999999864222222221   122222222     23444333  566777777765

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.26  E-value=1.8e-11  Score=104.08  Aligned_cols=161  Identities=17%  Similarity=0.080  Sum_probs=114.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC-ccccccccCCCceEEEeccccchh------------ccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++.+||||++-+||..++..+.+.+.+.....+..... .+.+..... ..+....+|+++..            -.+-
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            467899999999999999999999887544333322111 122221112 34455556655442            1358


Q ss_pred             CEEEEccCCCCCCCc-------cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          182 DQIYHLACPASPVHY-------KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       182 D~Vih~A~~~~~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      |+||||||...+...       ...|..+|+.|+.....+...+.+.    .  .-+|++||....              
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--------------  149 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--------------  149 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh--------------
Confidence            999999996655331       2358889999999999888776543    2  258999996554              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                        .|+..+..|+.+|++.+.+.+.++.|-  ++++..++||.+-.+
T Consensus       150 --~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~  193 (253)
T KOG1204|consen  150 --RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ  193 (253)
T ss_pred             --ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence              688888999999999999999998763  899999999988654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.25  E-value=2.5e-11  Score=99.08  Aligned_cols=163  Identities=17%  Similarity=0.108  Sum_probs=113.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccc---hhccCCCEEEEc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE---PILLEVDQIYHL  187 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~vD~Vih~  187 (335)
                      ..++|.++|.||||-.|+.+++.+++.+.  .|+++.|......+..    .......++.|-++   ....++|+.|.+
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~----k~v~q~~vDf~Kl~~~a~~~qg~dV~Fca   90 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD----KVVAQVEVDFSKLSQLATNEQGPDVLFCA   90 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc----ceeeeEEechHHHHHHHhhhcCCceEEEe
Confidence            45678999999999999999999999985  8999988642211111    01112222333233   356789999998


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      -|..   +-....+.++++.-.-...++++|++.|+ .|+++||..+-                 + ...-.|...|...
T Consensus        91 LgTT---RgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd-----------------~-sSrFlY~k~KGEv  149 (238)
T KOG4039|consen   91 LGTT---RGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD-----------------P-SSRFLYMKMKGEV  149 (238)
T ss_pred             eccc---ccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC-----------------c-ccceeeeeccchh
Confidence            7632   22223455666777777788999999998 79999997652                 2 2234699999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHH
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS  303 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~  303 (335)
                      |+-+.++.-+   +++|+|||.+.|.+.....+.+..
T Consensus       150 E~~v~eL~F~---~~~i~RPG~ll~~R~esr~geflg  183 (238)
T KOG4039|consen  150 ERDVIELDFK---HIIILRPGPLLGERTESRQGEFLG  183 (238)
T ss_pred             hhhhhhcccc---EEEEecCcceecccccccccchhh
Confidence            9988776433   589999999999886655444433

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.24  E-value=1.9e-10  Score=97.83  Aligned_cols=154  Identities=19%  Similarity=0.247  Sum_probs=102.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc--ccccccc--CCCceEEEeccccchh------------ccC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++||||+|.||..+++.|++++. +|+++.|......  ......+  ....+.++.+|+.++.            ...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999986 8999999832111  1111111  2457899999998761            245


Q ss_pred             CCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEeccc-ccCCCCCCCCCCCcCCCCCCCC
Q 019794          181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSE-VYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~-v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ++.|||+|+........+    .....+...+.|+.++.++...... .||++||.. ++|.                 .
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~-----------------~  144 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG-----------------P  144 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT------------------T
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC-----------------c
Confidence            899999998754333222    3566788999999999999988776 678888854 4543                 2


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCce
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT  289 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v  289 (335)
                      ....|+..-...+.+.+... ..+.++..+..+..
T Consensus       145 gq~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  145 GQSAYAAANAFLDALARQRR-SRGLPAVSINWGAW  178 (181)
T ss_dssp             TBHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred             chHhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence            34679999988888887754 35899888877643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.23  E-value=3.8e-11  Score=107.03  Aligned_cols=181  Identities=15%  Similarity=0.105  Sum_probs=126.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC--CCceEEEeccccchh---------c--cCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPI---------L--LEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~---------~--~~vD  182 (335)
                      ++-.+|||||.+||++.+++|+++|.+|+++.|+.++......+..+  ...+.++..|..+..         +  .++-
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            46899999999999999999999999999999987765443333222  244666666665442         2  2477


Q ss_pred             EEEEccCCCC--CCCccC----ChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          183 QIYHLACPAS--PVHYKY----NPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       183 ~Vih~A~~~~--~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|||+|...  +..+.+    ..+..+.+|+.++..+.+....    .+ .-+|++||....                .
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----------------~  192 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----------------I  192 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------------c
Confidence            9999999755  222211    2356788999998877776433    22 269999986543                4


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcc-h---HHHHHHHHHhC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGR-V---VSNFVAQAIRR  312 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~-~---i~~~~~~~~~~  312 (335)
                      |.+..+.|+.+|...+.+...+.+|+   ||.+-.+-|..|-++-.....++ +   -..|.+.+++.
T Consensus       193 p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~t  260 (312)
T KOG1014|consen  193 PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNT  260 (312)
T ss_pred             cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhh
Confidence            66667889999999999888888774   89999999999988643322222 2   23466666653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.17  E-value=7.8e-12  Score=101.66  Aligned_cols=161  Identities=20%  Similarity=0.247  Sum_probs=114.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      .++...+||||..++|+..++.|+++|..|.+++...++-.+..++.  ..++.+...|++.+            .+...
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--g~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--GGKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--CCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            35668999999999999999999999999999987654433333322  35677888888765            34669


Q ss_pred             CEEEEccCCCCCCC----------ccCChhhHHhhHHHHHHHHHHHHHH-c--------CCe--EEEEecccccCCCCCC
Q 019794          182 DQIYHLACPASPVH----------YKYNPVKTIKTNVMGTLNMLGLAKR-V--------GAK--FLLTSTSEVYGDPLEH  240 (335)
Q Consensus       182 D~Vih~A~~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~-~--------~~r--~v~iSS~~v~~~~~~~  240 (335)
                      |..+||||......          ..++..+.+++|+.||+|+++.... .        |.|  +|++.|...|.     
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd-----  159 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD-----  159 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec-----
Confidence            99999999643221          1235677899999999999986432 1        224  66777776663     


Q ss_pred             CCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                                 ..-....|+.||.+.-.+..-.++.   .||+++.+.||.+-.|
T Consensus       160 -----------gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp  203 (260)
T KOG1199|consen  160 -----------GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP  203 (260)
T ss_pred             -----------CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh
Confidence                       2233467999998766554444433   3899999999876554

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.09  E-value=1.4e-09  Score=100.11  Aligned_cols=170  Identities=13%  Similarity=0.057  Sum_probs=113.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccC-CCceEEEec-c--ccchhccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFR-NPRFELIRH-D--VVEPILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~-D--~~~~~~~~vD~Vih~  187 (335)
                      .+|++|.|+|++|.||+.++..|+.++  .+++++++.  .......+... .....+... |  ...+.+.++|+||++
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit   83 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC   83 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence            567899999999999999999998665  489999882  22221111111 112223221 1  114688999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC--CCCCCcCCCCCCCCCCChHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH--PQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~--~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      ||...  ....++...+..|+..+.++++++++.+. ++|+++|.-+.....-.  ...+.     ..+++...||.+-.
T Consensus        84 aG~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~-----sg~p~~~viG~g~L  156 (321)
T PTZ00325         84 AGVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKA-----GVYDPRKLFGVTTL  156 (321)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhc-----cCCChhheeechhH
Confidence            98532  22346788999999999999999999998 89999986543211100  00011     23445566777645


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      -.-++-...++..++....++ +.|+|..
T Consensus       157 Ds~R~r~~la~~l~v~~~~V~-~~VlGeH  184 (321)
T PTZ00325        157 DVVRARKFVAEALGMNPYDVN-VPVVGGH  184 (321)
T ss_pred             HHHHHHHHHHHHhCcChhheE-EEEEeec
Confidence            555666667777888888888 7888864

>PRK06720 hypothetical protein; Provisional

Probab=98.95  E-value=6.6e-09  Score=87.19  Aligned_cols=120  Identities=13%  Similarity=0.050  Sum_probs=75.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ..++++++||||+|+||.++++.|++.|++|++++|+........... .....+..+.+|+.+.            .+.
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457889999999999999999999999999999998654221111111 0123466778888654            235


Q ss_pred             CCCEEEEccCCCCCCC-ccC-ChhhHHhhHHHHHHHHHHHH----HHcC--------CeEEEEeccc
Q 019794          180 EVDQIYHLACPASPVH-YKY-NPVKTIKTNVMGTLNMLGLA----KRVG--------AKFLLTSTSE  232 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~-~~~-~~~~~~~~Nv~gt~~ll~~a----~~~~--------~r~v~iSS~~  232 (335)
                      .+|++|||||...... .+. ........|+.++......+    .+.+        .||..+||..
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            6999999999654322 222 21122245566554444433    2222        3788888754

>PLN00106 malate dehydrogenase

Probab=98.93  E-value=2e-08  Score=92.58  Aligned_cols=169  Identities=10%  Similarity=-0.012  Sum_probs=113.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC-CceEEE---eccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-PRFELI---RHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~---~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +||.|||++|.||+.++..|+.++.  ++++++..+  ......+.... ....+.   ..+...+++.++|+|||+||.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            5999999999999999999987664  899999866  22211121111 111222   222234678999999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ...  ...++...+..|...+.++++.+++.+. .+|+++|.-+-+...  ...... .....+++...||.++.-.+++
T Consensus        97 ~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~--i~t~~~-~~~s~~p~~~viG~~~LDs~Rl  171 (323)
T PLN00106         97 PRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVP--IAAEVL-KKAGVYDPKKLFGVTTLDVVRA  171 (323)
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHH--HHHHHH-HHcCCCCcceEEEEecchHHHH
Confidence            332  2356788999999999999999999997 788888753311000  000000 0113445567888888888899


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      -..++++.+++...+.- .|+|..
T Consensus       172 ~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        172 NTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             HHHHHHHhCCChhheEE-EEEEeC
Confidence            88899988988888754 555543

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.80  E-value=1.5e-08  Score=86.17  Aligned_cols=191  Identities=16%  Similarity=0.081  Sum_probs=112.7

Q ss_pred             CCeEEEEcCCchhHHHHHH-----HHHhCC----CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVD-----KLIDRG----DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~-----~Ll~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih  186 (335)
                      +...++-+++|+|+..|..     ++-+.+    |+|.++.|.+.+...... ++..+.+           -..|+..++
T Consensus        12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~-el~~~Gi-----------p~sc~a~vn   79 (315)
T KOG3019|consen   12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWP-ELDFPGI-----------PISCVAGVN   79 (315)
T ss_pred             cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccc-hhcCCCC-----------ceehHHHHh
Confidence            4467778999999988877     333334    789999997654332221 1111111           113555555


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHH-----HHHHHHHHHHcC--C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMG-----TLNMLGLAKRVG--A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~g-----t~~ll~~a~~~~--~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      .+|-.. ......|...++-|+.|     |..++++..+..  . .+|++|..++|-.......+|+     .+......
T Consensus        80 a~g~n~-l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~-----~~~qgfd~  153 (315)
T KOG3019|consen   80 AVGNNA-LLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEK-----IVHQGFDI  153 (315)
T ss_pred             hhhhhc-cCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccc-----cccCChHH
Confidence            444211 11112344455666655     566777776665  2 5999999999977666666666     34333333


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHH--HHHhCCCeEEecCCCceeeceeccccc
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA--QAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~--~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ...--..=|...+.. . ...+++++|.|.|.|.+     ++.+..++.  ++-.|+++   |+|.++++|||++|+|
T Consensus       154 ~srL~l~WE~aA~~~-~-~~~r~~~iR~GvVlG~g-----GGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~  221 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKA-N-KDVRVALIRIGVVLGKG-----GGALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLV  221 (315)
T ss_pred             HHHHHHHHHHHhhcc-C-cceeEEEEEEeEEEecC-----CcchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHH
Confidence            322111112222211 1 25899999999999986     444444443  33445654   8999999999999987

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.70  E-value=7.2e-08  Score=83.50  Aligned_cols=170  Identities=15%  Similarity=0.151  Sum_probs=113.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-----eEEEEecCCCCCccc---cccccC--CCceEEEeccccch---------
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-----EVIVIDNFFTGRKDN---LVHHFR--NPRFELIRHDVVEP---------  176 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-----~V~~~~r~~~~~~~~---~~~~~~--~~~~~~~~~D~~~~---------  176 (335)
                      .|.++|||++++||.+||.+|++...     ++++..|+.++..+.   +.+..+  ...++++..|+.+-         
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            46899999999999999999999865     355566654433322   222223  34678888888653         


Q ss_pred             ---hccCCCEEEEccCCCCCCCc-------------------------------cCChhhHHhhHHHHHHHHHHHHHHc-
Q 019794          177 ---ILLEVDQIYHLACPASPVHY-------------------------------KYNPVKTIKTNVMGTLNMLGLAKRV-  221 (335)
Q Consensus       177 ---~~~~vD~Vih~A~~~~~~~~-------------------------------~~~~~~~~~~Nv~gt~~ll~~a~~~-  221 (335)
                         .+...|.|+-|||.......                               .+.....+++||.|..-+++..... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence               24569999999996533221                               1234578999999999988866543 


Q ss_pred             ----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          222 ----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       222 ----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                          ..++|.+||...-..   ...-|+    +.......+|..||++.+.+-.+..+.   .|+...++.||..-..
T Consensus       163 ~~~~~~~lvwtSS~~a~kk---~lsleD----~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKK---NLSLED----FQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             hcCCCCeEEEEeecccccc---cCCHHH----HhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence                237999999754221   111222    133445567999999988876665443   2678888888875443

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.69  E-value=2.2e-07  Score=85.93  Aligned_cols=163  Identities=13%  Similarity=0.069  Sum_probs=114.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCC--CccccccccCC-----CceEEEeccccchhccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRN-----PRFELIRHDVVEPILLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~v  181 (335)
                      .++|.|+|++|.||..++..|+..|.       ++++++.....  ......+....     ..+.+. . -..+.+.++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~-~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D-DPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c-CcHHHhCCC
Confidence            45899999999999999999998775       68888885432  22222221111     123332 2 234678999


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEec-c--cccCCCCCCCCCCCcCCCCCC-CC
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST-S--EVYGDPLEHPQKETYWGNVNP-IG  254 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iSS-~--~v~~~~~~~~~~E~~~~~~~~-~~  254 (335)
                      |+||.+||...  ....+-.+.++.|+.-...+....++.+ .  .+|.+|- .  .+|-.          | ...+ ++
T Consensus        80 DivvitaG~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----------~-k~sg~~p  146 (322)
T cd01338          80 DWALLVGAKPR--GPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----------M-KNAPDIP  146 (322)
T ss_pred             CEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----------H-HHcCCCC
Confidence            99999998532  2234567789999999999999998876 2  4555553 1  01100          0 0022 45


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      +...|+.++...+++...+++..+++...+|..+|||+.
T Consensus       147 ~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         147 PDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             hHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            556899999999999999999999999999999999986

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.66  E-value=5.6e-07  Score=83.97  Aligned_cols=164  Identities=14%  Similarity=0.110  Sum_probs=97.7

Q ss_pred             CCCCeEEEEcCCchhHHH--HHHHHHhCCCeEEEEecCCCCCcc-----------ccccccC--CCceEEEeccccch--
Q 019794          114 RRRLRIVVTGGAGFVGSH--LVDKLIDRGDEVIVIDNFFTGRKD-----------NLVHHFR--NPRFELIRHDVVEP--  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~--l~~~Ll~~g~~V~~~~r~~~~~~~-----------~~~~~~~--~~~~~~~~~D~~~~--  176 (335)
                      ..+|++|||||++.+|.+  +++.| +.|++|+++++.......           .......  ...+..+.+|++++  
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999999999999  89999 999998888753221110           1111111  12456788999775  


Q ss_pred             ----------hccCCCEEEEccCCCCCCC-----------------ccC------------------Ch-hhHHhhHHHH
Q 019794          177 ----------ILLEVDQIYHLACPASPVH-----------------YKY------------------NP-VKTIKTNVMG  210 (335)
Q Consensus       177 ----------~~~~vD~Vih~A~~~~~~~-----------------~~~------------------~~-~~~~~~Nv~g  210 (335)
                                .+.++|+|||++|......                 ...                  .. +-..-+.++|
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence                      2457999999998653221                 000                  00 0011233444


Q ss_pred             HHHH---HHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CC
Q 019794          211 TLNM---LGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GV  279 (335)
Q Consensus       211 t~~l---l~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i  279 (335)
                      ....   +++....     |+++|-.|....          |..|    |.-..+..|..|+..|..++.++.+.   |+
T Consensus       198 gedw~~Wi~al~~a~lla~g~~~va~TY~G~----------~~t~----p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gi  263 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAEGAKTVAYSYIGP----------ELTH----PIYWDGTIGKAKKDLDRTALALNEKLAAKGG  263 (398)
T ss_pred             cchHHHHHHHHHhcccccCCcEEEEEecCCc----------ceee----cccCCchHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            4222   1222222     345665554211          1111    11111467999999999999998764   78


Q ss_pred             cEEEEEeCceeCC
Q 019794          280 EVRIARIFNTYGP  292 (335)
Q Consensus       280 ~~~ivRp~~v~Gp  292 (335)
                      +++++-.+-+.-.
T Consensus       264 ran~i~~g~~~T~  276 (398)
T PRK13656        264 DAYVSVLKAVVTQ  276 (398)
T ss_pred             EEEEEecCcccch
Confidence            9999888777654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.65  E-value=6.8e-08  Score=81.59  Aligned_cols=154  Identities=12%  Similarity=0.073  Sum_probs=94.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD~V  184 (335)
                      |+++||||||++|. +++.|+++|++|++++|+................+..+.+|+.++.            ...+|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            58999999988775 9999999999999999864332211111111246778888887751            2457888


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCe-----EEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-----FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-----~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      |+.+                  .+.++.++..+|++.+++     ++++=++.+-                ++       
T Consensus        80 v~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~----------------~~-------  118 (177)
T PRK08309         80 VAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAAS----------------DP-------  118 (177)
T ss_pred             EEec------------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCC----------------ch-------
Confidence            8643                  445678999999998855     8887544331                11       


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC--CCCCcchHHHHHHHHHhCCCeEEecC
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM--CLDDGRVVSNFVAQAIRRQPMTVYGD  320 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~--~~~~~~~i~~~~~~~~~~~~~~~~g~  320 (335)
                         +...+....     ....+.-|..|++.-...  +..+.-+-...++.+..+.+..+.|.
T Consensus       119 ---~~~~~~~~~-----~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 ---RIPSEKIGP-----ARCSYRRVILGFVLEDTYSRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             ---hhhhhhhhh-----cCCceEEEEEeEEEeCCccccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence               112222221     256788888888765321  11122233445566666666655543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.62  E-value=4.6e-07  Score=83.94  Aligned_cols=112  Identities=14%  Similarity=0.079  Sum_probs=74.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCC--CccccccccCCC---ceEEEeccccchhccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG-------DEVIVIDNFFTG--RKDNLVHHFRNP---RFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~D~~~~~~~~vD~V  184 (335)
                      .+|+||||+|+||++++..|+..+       .+|+++++....  ......+..+..   .-++...+...+.+.++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            479999999999999999998854       489999986432  111111111100   00111112234678899999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEec
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST  230 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iSS  230 (335)
                      ||+||....  ...+..+.++.|+.-...+....++.. .  .+|.+|.
T Consensus        83 I~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          83 ILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999986432  234567889999999999998888873 2  4555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.44  E-value=8.2e-07  Score=78.06  Aligned_cols=74  Identities=20%  Similarity=0.489  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCC----------------chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec--cccc-
Q 019794          115 RRLRIVVTGGA----------------GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH--DVVE-  175 (335)
Q Consensus       115 ~~~~vlVTGat----------------G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~-  175 (335)
                      ++|+||||+|.                ||+|++|+++|+++|++|+++++..........   ....+..+..  |+.+ 
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~~   78 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQDK   78 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHHH
Confidence            57899999886                999999999999999999999864321111111   1122333444  4433 


Q ss_pred             --hhc--cCCCEEEEccCCC
Q 019794          176 --PIL--LEVDQIYHLACPA  191 (335)
Q Consensus       176 --~~~--~~vD~Vih~A~~~  191 (335)
                        +.+  .++|+|||+||..
T Consensus        79 l~~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         79 MKSIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHhcccCCCEEEECcccc
Confidence              234  3689999999863

>PRK05086 malate dehydrogenase; Provisional

Probab=98.38  E-value=5e-06  Score=76.67  Aligned_cols=111  Identities=18%  Similarity=0.114  Sum_probs=75.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-C--CCeEEEEecCCCCCccccccccCCC-ceEEEe--ccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLID-R--GDEVIVIDNFFTGRKDNLVHHFRNP-RFELIR--HDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~-~--g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~--~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |+|+|.||+|.||++++..|.. .  +++++++++.+. ......+..... ...+..  .+...+.+.++|+||.++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence            6899999999999999988854 2  457888887643 211111111111 122221  22224577899999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      ...  ...+....+..|.....++++++++.+. ++|.+.|
T Consensus        80 ~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         80 ARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            332  2345677899999999999999999987 6777766

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.36  E-value=9.8e-06  Score=69.59  Aligned_cols=160  Identities=13%  Similarity=0.051  Sum_probs=102.6

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~------------~  177 (335)
                      .++||++||+|-..  .|+..|++.|.++|+++...+..+. .+....+... ....-++.||+.++            .
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~-l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER-LEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH-HHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            46799999999654  8999999999999999999887652 2222222211 12345788998765            2


Q ss_pred             ccCCCEEEEccCCCCCCCcc----C----ChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASPVHYK----Y----NPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~~----~----~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ..+.|.|+|+.|........    +    ++...+++-...-..+.++|+..   |..+|-.+=...          |  
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs----------~--  149 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS----------E--  149 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc----------e--
Confidence            45699999999865422211    1    22334444444444555555542   234444332110          0  


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                          ...+..+..+..|+..|.-++.++.+.   |++++.+.-|-|
T Consensus       150 ----r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPI  191 (259)
T COG0623         150 ----RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPI  191 (259)
T ss_pred             ----eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccch
Confidence                223445789999999999999999774   788888776654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.29  E-value=9.9e-07  Score=82.60  Aligned_cols=94  Identities=24%  Similarity=0.333  Sum_probs=69.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~vD~Vih~A~  189 (335)
                      ||+|+|.|+ |+||+.++..|+++| .+|++.+|+.++..+.....  ..+++....|+.+     +.+.+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--GGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--cccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            579999998 999999999999999 69999999755433322211  1256666666655     36788899999885


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      +..                  ..+++++|.+.|+.++=+|=
T Consensus        78 ~~~------------------~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          78 PFV------------------DLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             chh------------------hHHHHHHHHHhCCCEEEccc
Confidence            321                  12789999999988887774

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.25  E-value=9.2e-06  Score=66.00  Aligned_cols=111  Identities=14%  Similarity=0.103  Sum_probs=77.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc---cCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      |||.|+|++|.+|++++..|...+.  +++++++.+........+.   ............-..+.+.++|+||-+||..
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            5899999999999999999999875  8999998754332222111   1111122222224456789999999999853


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                        .....+..+.++.|..-.+.+++...+.+.  .++.+|
T Consensus        81 --~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   81 --RKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             --SSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             --ccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence              233345778899999999999999998875  455554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.17  E-value=6.8e-06  Score=72.41  Aligned_cols=68  Identities=18%  Similarity=0.344  Sum_probs=45.6

Q ss_pred             EEEE-cCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-------hhccCCCEEEEccCC
Q 019794          119 IVVT-GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-------PILLEVDQIYHLACP  190 (335)
Q Consensus       119 vlVT-GatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-------~~~~~vD~Vih~A~~  190 (335)
                      -+|| .+|||||++|+++|+++|++|+++.+......      .....++++..+..+       ..+.++|+|||+||.
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv   91 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAV   91 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence            3444 67899999999999999999999987532111      011244444433322       245679999999987


Q ss_pred             CC
Q 019794          191 AS  192 (335)
Q Consensus       191 ~~  192 (335)
                      ..
T Consensus        92 sd   93 (229)
T PRK06732         92 SD   93 (229)
T ss_pred             CC
Confidence            43

>cd00704 MDH Malate dehydrogenase

Probab=98.15  E-value=3.1e-05  Score=71.65  Aligned_cols=108  Identities=13%  Similarity=0.077  Sum_probs=74.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCC--CCCccccccccCC-----CceEEEeccccchhccCCCE
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFF--TGRKDNLVHHFRN-----PRFELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~--~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~vD~  183 (335)
                      +|.||||+|.||+.++..|+..+.       +++++++..  +.......+....     ..+.+ . +-..+.+.++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i-~-~~~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVI-T-TDPEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEE-e-cChHHHhCCCCE
Confidence            799999999999999999987653       488998875  3222222111111     11222 2 234567899999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEe
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTS  229 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iS  229 (335)
                      |||+||..  .....+-...+..|+.-.+.+....++.+ .  .+|.+|
T Consensus        80 VVitAG~~--~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          80 AILVGAFP--RKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EEEeCCCC--CCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999853  23334667789999999999999998884 4  455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.09  E-value=7.5e-05  Score=69.20  Aligned_cols=110  Identities=15%  Similarity=0.078  Sum_probs=73.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCC--CccccccccCCC---ceEEEeccccchhccCCCEEE
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRNP---RFELIRHDVVEPILLEVDQIY  185 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~---~~~~~~~D~~~~~~~~vD~Vi  185 (335)
                      +|.|+|++|.||+.++..|...+.       +++++++.+..  ......+.....   .-..+..+-..+.+.++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            589999999999999999987543       58899885443  111111111111   001111212246789999999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEe
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTS  229 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iS  229 (335)
                      ++||...  ....+..+.+..|+.-.+.+....++.. .  .+|.+|
T Consensus        81 itAG~~~--~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        81 LVGAFPR--KEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             EcCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9998532  2234578899999999999999998884 4  455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.01  E-value=0.00011  Score=67.62  Aligned_cols=110  Identities=15%  Similarity=0.086  Sum_probs=74.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCC--CCCccccccccC-----CCceEEEe-ccccchhccCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFF--TGRKDNLVHHFR-----NPRFELIR-HDVVEPILLEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~--~~~~~~~~~~~~-----~~~~~~~~-~D~~~~~~~~vD~Vih  186 (335)
                      |+|.|+|+||++|..++..|+..|.  +|+++++..  +...........     .....+.. .|  .+.+.++|+||-
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d--~~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD--LSDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC--HHHhCCCCEEEE
Confidence            5899999999999999999999986  599999854  222211111111     01122322 23  345899999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEec
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST  230 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS  230 (335)
                      ++|..  .....+....++.|+.-...+++...+.+.  ++|.+++
T Consensus        79 tag~p--~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          79 TAGVP--RKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             ecCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99742  222234467788999999999998877753  5666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.98  E-value=0.0001  Score=58.22  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=58.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC--CCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      ||.|.||||++|+.|++.|++... ++..+..........+.....  ....++...+...+.+.++|+||.+.+     
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~-----   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALP-----   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SC-----
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCc-----
Confidence            689999999999999999999654 555544433322222221111  111222222333445689999998763     


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                   -..+..+...+.+.|+++|=.|+..
T Consensus        76 -------------~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   76 -------------HGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             -------------HHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             -------------hhHHHHHHHHHhhCCcEEEeCCHHH
Confidence                         1223456666678888777777654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.97  E-value=2.1e-05  Score=70.20  Aligned_cols=69  Identities=16%  Similarity=0.260  Sum_probs=45.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc----hhc--cCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE----PIL--LEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~--~~vD~Vih~A~~  190 (335)
                      |+|||+||||. |+.|+++|.+.|++|++..+..........    .....++.+.+..    ..+  .++|+||+.+.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            58999999999 999999999999999999887653322111    1111222222111    122  359999998754

This enzyme was found to be a monomer by gel filtration.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.96  E-value=8.4e-06  Score=75.46  Aligned_cols=73  Identities=19%  Similarity=0.315  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhC-C-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDR-G-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..++++|+||||+|+||+.++++|+++ | .+++++.|+...... +...+....  +.  | .++.+.++|+|||+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~-La~el~~~~--i~--~-l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQE-LQAELGGGK--IL--S-LEEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHH-HHHHhcccc--HH--h-HHHHHccCCEEEECCcC
Confidence            467889999999999999999999865 5 488888886442221 221111111  11  2 34577889999999975


Q ss_pred             C
Q 019794          191 A  191 (335)
Q Consensus       191 ~  191 (335)
                      .
T Consensus       226 ~  226 (340)
T PRK14982        226 P  226 (340)
T ss_pred             C
Confidence            3

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.96  E-value=1.8e-05  Score=75.35  Aligned_cols=91  Identities=29%  Similarity=0.319  Sum_probs=63.1

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|.|| |++|+.+++.|++.+.  +|++.+|+.......... +...+++.+..|+.+.     .+.++|+|||++++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK-LLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-ccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 9999999999999975  899999975543332221 1456888999998764     567899999999752


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                                        ....++++|.+.|+.+|-+|
T Consensus        79 ------------------~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   79 ------------------FGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             ------------------GHHHHHHHHHHHT-EEEESS
T ss_pred             ------------------hhHHHHHHHHHhCCCeeccc
Confidence                              12268888888888877744

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.95  E-value=1.3e-05  Score=68.84  Aligned_cols=76  Identities=16%  Similarity=0.215  Sum_probs=50.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CCceEEEeccccc-----hhccCCCEEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NPRFELIRHDVVE-----PILLEVDQIYH  186 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~-----~~~~~vD~Vih  186 (335)
                      ..++++++|+||+|.+|+.+++.|++.|++|+++.|+.+.... +...+. .....+...|..+     +.+.++|+||+
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK-AADSLRARFGEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            3567899999999999999999999999999999887532221 111111 1122233333322     46778999998


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.92  E-value=0.00018  Score=66.14  Aligned_cols=110  Identities=14%  Similarity=0.038  Sum_probs=76.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC-CceEEEe--c-cccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-PRFELIR--H-DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~-D~~~~~~~~vD~Vih~A~~  190 (335)
                      |+|.|+|++|.||+.++..|+..+.  ++++++.+  .......+.... ....+..  . |...+.+.++|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence            5899999999999999999988874  89999886  222222222111 1122322  2 2224678999999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEec
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST  230 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS  230 (335)
                      .  .....+-...++.|..-...+++..++.+.  .+|.+|-
T Consensus        79 ~--~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          79 P--RKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            3  223346778899999999999999988874  5555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.91  E-value=0.00022  Score=66.47  Aligned_cols=94  Identities=21%  Similarity=0.210  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      |++|+|.||||++|.++++.|.++++   ++..+.+....-+. +.  +.  ..++...|+.+..+.++|+||.+++.. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-l~--~~--g~~i~v~d~~~~~~~~vDvVf~A~g~g-   74 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-LS--FK--GKELKVEDLTTFDFSGVDIALFSAGGS-   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-ee--eC--CceeEEeeCCHHHHcCCCEEEECCChH-
Confidence            46899999999999999999999876   45777664322111 11  11  134444566555567899999877521 


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                       -+..++..+.+.|+++|=.|+..
T Consensus        75 -----------------~s~~~~~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         75 -----------------VSKKYAPKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             -----------------HHHHHHHHHHhCCCEEEECCchh
Confidence                             12345555556677777677654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.89  E-value=4.2e-05  Score=72.74  Aligned_cols=70  Identities=23%  Similarity=0.269  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-
Q 019794          113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-  175 (335)
Q Consensus       113 ~~~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-  175 (335)
                      .+++++|+||||                +|.+|.+++++|.++|++|+++++.....   .    . ..+.  ..|+.+ 
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~---~----~-~~~~--~~dv~~~  254 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP---T----P-AGVK--RIDVESA  254 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc---C----C-CCcE--EEccCCH
Confidence            367899999999                89999999999999999999998754211   0    0 1122  223322 


Q ss_pred             --------hhccCCCEEEEccCCCC
Q 019794          176 --------PILLEVDQIYHLACPAS  192 (335)
Q Consensus       176 --------~~~~~vD~Vih~A~~~~  192 (335)
                              ..+.++|++||+||+..
T Consensus       255 ~~~~~~v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        255 QEMLDAVLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHHHHHHhcCCCCEEEEcccccc
Confidence                    23467999999999643

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.89  E-value=0.00019  Score=66.28  Aligned_cols=111  Identities=18%  Similarity=0.220  Sum_probs=78.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC----CceEEEeccccchhccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ..++||.|+|+ |.||..++..|+..|.  ++++++++.........+....    ..+.+...|  .+.+.++|+||-+
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~--~~~~~~adivIit   80 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD--YSDCKDADLVVIT   80 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC--HHHhCCCCEEEEe
Confidence            35679999998 9999999999999886  8999998765443322222111    233343332  3568999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||...  ....+....++.|..-.+.+++..++.+.  .++.+|
T Consensus        81 ag~~~--k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         81 AGAPQ--KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             cCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            98532  22345667889999999999999888764  565555

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.85  E-value=0.00017  Score=68.23  Aligned_cols=103  Identities=17%  Similarity=0.154  Sum_probs=64.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccC-CCceEEE-eccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFR-NPRFELI-RHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++++|.|.||||++|.+|++.|+++ ..+|..+.+....- +.+..... ....+.. ..++....+.++|+||.+.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            46679999999999999999999998 45888888753321 11111100 0001111 112222335789999986631


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                                        ....+++..+ +.++++|-.|++.-+.+
T Consensus       115 ------------------~~s~~i~~~~-~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        115 ------------------GTTQEIIKAL-PKDLKIVDLSADFRLRD  141 (381)
T ss_pred             ------------------HHHHHHHHHH-hCCCEEEEcCchhccCC
Confidence                              1444666665 45779999999876644

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.80  E-value=9e-05  Score=72.00  Aligned_cols=76  Identities=20%  Similarity=0.201  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++|+|+|+|+++ +|..+++.|++.|++|+++++............+....+.++..|..+....++|+||+++|.
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~   78 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV   78 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence            4678999999877 999999999999999999988642211111112223356678888888777889999998875

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.79  E-value=5.7e-05  Score=66.46  Aligned_cols=89  Identities=12%  Similarity=0.202  Sum_probs=50.9

Q ss_pred             eEEEE-cCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-------hccCCCEEEEccC
Q 019794          118 RIVVT-GGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIYHLAC  189 (335)
Q Consensus       118 ~vlVT-GatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~vD~Vih~A~  189 (335)
                      +=+|| .++|+||.+|+++|+++|++|+++++...     +.. .....+++.+.+..+.       .+..+|++|||||
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-----l~~-~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-----LKP-EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-----ccc-ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            34555 45899999999999999999999875311     110 0112334443322221       3457999999999


Q ss_pred             CCCCCCc-cCChhhHHhhHHHHHH
Q 019794          190 PASPVHY-KYNPVKTIKTNVMGTL  212 (335)
Q Consensus       190 ~~~~~~~-~~~~~~~~~~Nv~gt~  212 (335)
                      ....... ..+.+.+.+++..++.
T Consensus        90 v~d~~~~~~~s~e~~~~~~~~~~~  113 (227)
T TIGR02114        90 VSDYTPVYMTDLEQVQASDNLNEF  113 (227)
T ss_pred             eccccchhhCCHHHHhhhcchhhh
Confidence            6432221 2233344444444433

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.77  E-value=0.00023  Score=65.58  Aligned_cols=108  Identities=19%  Similarity=0.242  Sum_probs=75.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccc---c--CCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHH---F--RNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++|.|.|+ |.+|+.++..|+..|  ++|++++++.........+.   .  ......+...+  .+.+.++|+||.++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~--~~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD--YSDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC--HHHhCCCCEEEEccC
Confidence            37999995 999999999999999  58999999765433222221   1  01122233222  235789999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ...  ....+-...++.|..-.+.+.+..++.+.  .++.+|
T Consensus        78 ~~~--~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          78 APQ--KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            532  22345667889999999999999988764  566665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.75  E-value=0.00036  Score=66.96  Aligned_cols=111  Identities=9%  Similarity=0.039  Sum_probs=79.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-------CC--eEEEEecCCCCCccccccccCC-----CceEEEeccccchhccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-------GD--EVIVIDNFFTGRKDNLVHHFRN-----PRFELIRHDVVEPILLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-------g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~v  181 (335)
                      .-+|.|+|++|.||.+++-.|+..       +.  +++.++++.+.......+..+.     ..+.+..  -..+.+.++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~--~~ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI--DPYEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec--CCHHHhCcC
Confidence            348999999999999999999887       54  7888888766554433332211     1222222  234678999


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHH-cCC--eEEEEec
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR-VGA--KFLLTST  230 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~--r~v~iSS  230 (335)
                      |+||-.||..  .....+-.+.++.|+.-...+.....+ .+.  ++|.+|-
T Consensus       178 DiVVitAG~p--rkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        178 EWALLIGAKP--RGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CEEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            9999999853  223346678899999999999999988 454  5666663

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.73  E-value=5.3e-05  Score=61.08  Aligned_cols=76  Identities=20%  Similarity=0.279  Sum_probs=58.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..++++++|.|+ |.+|+.++..|.+.|. +|+++.|+.+.. +.+.+.+....+.++..+-....+.++|+||++.+.
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra-~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA-EALAEEFGGVNIEAIPLEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH-HHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCC
Confidence            467889999996 8899999999999998 599999865432 233333445567788877777788999999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.69  E-value=0.00071  Score=62.28  Aligned_cols=109  Identities=14%  Similarity=0.016  Sum_probs=74.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC-CceEEEe--cc-ccchhccCCCEEEEccCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN-PRFELIR--HD-VVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~D-~~~~~~~~vD~Vih~A~~~  191 (335)
                      ||.|+|++|.||+.++..|+..+.  +++++|+.+  ......+.... ....+..  .+ ...+.+.++|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence            589999999999999999988875  788998865  22222221111 1123332  12 2346889999999999853


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEec
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST  230 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS  230 (335)
                      .  ....+-...++.|..-.+.+.+...+.+.  .+|.+|-
T Consensus        79 ~--~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 R--KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             C--CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            2  22345677889999999999998888764  4555553

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.68  E-value=0.00097  Score=61.82  Aligned_cols=163  Identities=12%  Similarity=0.053  Sum_probs=96.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCC--CccccccccCC-----CceEEEeccccchhccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRN-----PRFELIRHDVVEPILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~  180 (335)
                      ++++|.|+|++|.||+.++..|+..+.       +++++|..+..  ......+....     ..+.+.  .-..+.+.+
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCC
Confidence            356999999999999999999987653       68888875432  22222211111     122222  222467899


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEec-c--cccCCCCCCCCCCCcCCCCC-CC
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST-S--EVYGDPLEHPQKETYWGNVN-PI  253 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iSS-~--~v~~~~~~~~~~E~~~~~~~-~~  253 (335)
                      +|+||-+||..  .....+-.+.++.|..-.+.+....++.. .  .+|.+|- .  .+|-..      +.     . -+
T Consensus        81 aDiVVitaG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~------k~-----s~g~  147 (326)
T PRK05442         81 ADVALLVGARP--RGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAM------KN-----APDL  147 (326)
T ss_pred             CCEEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHH------HH-----cCCC
Confidence            99999999853  22334677889999999999999998844 2  5555553 1  001000      00     0 11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      ++....+.+-.-.-++-..+++..+++...++-..|+|.
T Consensus       148 p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~Ge  186 (326)
T PRK05442        148 PAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGN  186 (326)
T ss_pred             CHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEEC
Confidence            111122223334444445555666777777666566675

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.67  E-value=3.8e-05  Score=72.74  Aligned_cols=112  Identities=13%  Similarity=0.178  Sum_probs=68.0

Q ss_pred             CCCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecccc-c
Q 019794          113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-E  175 (335)
Q Consensus       113 ~~~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~  175 (335)
                      .+++++|+||||                +|.+|.+++++|..+|++|+++.+.....   ....  ...+++...+-. +
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~--~~~~~v~~~~~~~~  256 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPG--VKSIKVSTAEEMLE  256 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCC--cEEEEeccHHHHHH
Confidence            367899999999                36799999999999999999988653221   0000  011222222111 2


Q ss_pred             ----hhccCCCEEEEccCCCCCCCccC---C---hhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          176 ----PILLEVDQIYHLACPASPVHYKY---N---PVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       176 ----~~~~~vD~Vih~A~~~~~~~~~~---~---~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                          ....++|++|++||+........   .   ....+..|+.-+-.++...++...+.+.++
T Consensus       257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~lvg  320 (390)
T TIGR00521       257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVIVG  320 (390)
T ss_pred             HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEEEE
Confidence                12346899999999754322111   1   112345777778888887766543334444

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.67  E-value=0.00034  Score=65.06  Aligned_cols=97  Identities=19%  Similarity=0.192  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      ++++|.|+||||++|..+++.|.++++   ++..+... +...+.+.  +....+++...|.  ..+.++|+||-+.+. 
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~--~~~~~l~~~~~~~--~~~~~vD~vFla~p~-   76 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP--FAGKNLRVREVDS--FDFSQVQLAFFAAGA-   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec--cCCcceEEeeCCh--HHhcCCCEEEEcCCH-
Confidence            346999999999999999999998766   34444332 22111111  1112233333332  235789999986631 


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                                       .-...++..+.+.|+++|=.|+..-+
T Consensus        77 -----------------~~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         77 -----------------AVSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             -----------------HHHHHHHHHHHHCCCeEEECchhhcC
Confidence                             01224777777788888888886543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.66  E-value=0.00064  Score=62.09  Aligned_cols=110  Identities=18%  Similarity=0.133  Sum_probs=75.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCC-----ceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNP-----RFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +||.|+|+ |+||+.++..|+.++.  ++++++......+....+.....     ... +.+|-..+.+.++|+|+-.||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~-i~~~~~y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVK-ITGDGDYEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceE-EecCCChhhhcCCCEEEEeCC
Confidence            48999999 9999999999988764  89999987444433333222111     122 222222567899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      ..  ...-..-.+.++.|..-...+.+...+.+. -++++-|
T Consensus        79 ~p--rKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          79 VP--RKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CC--CCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            43  223345677889999999999999888775 3444433

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.62  E-value=0.00033  Score=55.57  Aligned_cols=97  Identities=18%  Similarity=0.280  Sum_probs=58.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-CCCeEEEE-ecCCCCCc-cccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLID-RGDEVIVI-DNFFTGRK-DNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      ++|+|.|++|.+|+.+++.+.+ .+.++... ++..+... .............+...+..++.+..+|+||.+.     
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT-----   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT-----   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC-----
Confidence            4899999999999999999999 56676554 44432111 1121111111222222344566667799999864     


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                                   +-..+...++.|.+.++.+|.-+|.
T Consensus        76 -------------~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   76 -------------NPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             --------------HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             -------------ChHHhHHHHHHHHhCCCCEEEECCC
Confidence                         3355667888888888877765553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.60  E-value=0.0019  Score=59.89  Aligned_cols=161  Identities=14%  Similarity=0.064  Sum_probs=96.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCC--CccccccccCC-----CceEEEeccccchhccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTG--RKDNLVHHFRN-----PRFELIRHDVVEPILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~vD  182 (335)
                      .+|.|+|++|+||+.++..|+..+.       ++++++.....  ......+....     ..+.+. . -..+.+.++|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~-~~~~~~~daD   81 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-T-DPEEAFKDVD   81 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-c-ChHHHhCCCC
Confidence            4899999999999999999988874       68888885422  22222111111     122222 2 2346789999


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC---eEEEEec-c--cccCCCCCCCCCCCcCCCCC-CCCC
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTST-S--EVYGDPLEHPQKETYWGNVN-PIGE  255 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~---r~v~iSS-~--~v~~~~~~~~~~E~~~~~~~-~~~~  255 (335)
                      +||.+||..  .....+-.+.+..|+.-.+.+...+++.+.   .++.+|- .  .+|-.      -+.     . -+++
T Consensus        82 vVVitAG~~--~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~------~k~-----s~g~p~  148 (323)
T TIGR01759        82 AALLVGAFP--RKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA------SKN-----APDIPP  148 (323)
T ss_pred             EEEEeCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH------HHH-----cCCCCH
Confidence            999999853  223356778899999999999999988763   3455542 0  00000      000     0 1111


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      ....|.+..-.-++-..+++..+++...++-..|+|.
T Consensus       149 ~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~Ge  185 (323)
T TIGR01759       149 KNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGN  185 (323)
T ss_pred             HHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEec
Confidence            1122223344444444555666777777766667775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.58  E-value=0.00058  Score=63.80  Aligned_cols=98  Identities=15%  Similarity=0.115  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      ..++|.|.||||++|..|++.|.++++   ++..+..... .......    ...++...++..+.+.++|+||.+++..
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs-aGk~~~~----~~~~~~v~~~~~~~~~~~D~vf~a~p~~   80 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS-AGKKVTF----EGRDYTVEELTEDSFDGVDIALFSAGGS   80 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC-CCCeeee----cCceeEEEeCCHHHHcCCCEEEECCCcH
Confidence            446899999999999999999998776   4444432211 1111111    1123333344445567899999877421


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                                        ....++..+.+.|+++|=.|+..-+.
T Consensus        81 ------------------~s~~~~~~~~~~g~~VIDlS~~fR~~  106 (344)
T PLN02383         81 ------------------ISKKFGPIAVDKGAVVVDNSSAFRME  106 (344)
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCchhhcC
Confidence                              12245555556788888888876443

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.56  E-value=0.0021  Score=52.51  Aligned_cols=136  Identities=20%  Similarity=0.099  Sum_probs=80.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc-c--------ch-----hccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-V--------EP-----ILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~--------~~-----~~~~vD  182 (335)
                      .+|+|-||-|-+|+++++.+.++++-|.-++..+....+         .-.+++++. +        .+     .-+++|
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad---------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD---------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc---------ceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            489999999999999999999999999888875432211         111222221 1        11     124599


Q ss_pred             EEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEec-ccccCCCCCCCCCCCcCCCCCCCC
Q 019794          183 QIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTST-SEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       183 ~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS-~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      .||+.||--....     ...+-+.+++-.+-...--...|..+- . -++-... ....                .+.+
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl----------------~gTP  138 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAAL----------------GGTP  138 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccccc----------------CCCC
Confidence            9999987432222     122333344433333222223333321 1 2333333 3222                3445


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA  277 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~  277 (335)
                      .+-+|+..|.+..++.+.++.+.
T Consensus       139 gMIGYGMAKaAVHqLt~SLaak~  161 (236)
T KOG4022|consen  139 GMIGYGMAKAAVHQLTSSLAAKD  161 (236)
T ss_pred             cccchhHHHHHHHHHHHHhcccc
Confidence            56789999999999999988653

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.52  E-value=0.00048  Score=64.24  Aligned_cols=106  Identities=21%  Similarity=0.315  Sum_probs=71.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc------------------------cccccccCCCceE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------------DNLVHHFRNPRFE  167 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~------------------------~~~~~~~~~~~~~  167 (335)
                      ..+.++|+|.|+ |++|+.+++.|++.|. ++.++|.+.-...                        +.+.+..+...++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            345679999996 9999999999999998 8999988631110                        0011111223455


Q ss_pred             EEeccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          168 LIRHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       168 ~~~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      .+..++..    +.+.+.|+||.+.                 .|...-..+-++|.+.++.+|+.++...||.
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~~-----------------Dn~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        100 AIVQDVTAEELEELVTGVDLIIDAT-----------------DNFETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             EEeccCCHHHHHHHHcCCCEEEEcC-----------------CCHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            55555543    3567899999875                 2333344677889899888999887666653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.51  E-value=0.00049  Score=64.20  Aligned_cols=105  Identities=19%  Similarity=0.289  Sum_probs=69.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc------------------------cccccccCCCceE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------------DNLVHHFRNPRFE  167 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~------------------------~~~~~~~~~~~~~  167 (335)
                      ..+.++|+|.|+ |.+|+++++.|++.|. +++++|++.-...                        +.+.+......++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            345679999996 7899999999999998 8888888742110                        0011111233455


Q ss_pred             EEecccc----chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          168 LIRHDVV----EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       168 ~~~~D~~----~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      .+..|+.    ++.+.++|+||.+..                 |...-..+-++|.+.++.+|+.+....+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~~D-----------------~~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        100 PVVTDVTVEELEELVKEVDLIIDATD-----------------NFDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             EEeccCCHHHHHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            6666654    335678999998751                 22222345578888888888887665554

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.49  E-value=0.00047  Score=64.34  Aligned_cols=67  Identities=16%  Similarity=0.203  Sum_probs=44.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEE---EEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVI---VIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +|+|.||||++|..|++.|.++++.++   .+.+....- ..+.  +  ...+....|+....+.++|+||-+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-~~~~--~--~~~~~~~~~~~~~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-RKVT--F--KGKELEVNEAKIESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-Ceee--e--CCeeEEEEeCChHHhcCCCEEEECCC
Confidence            589999999999999999999887543   343432211 1111  1  12345555555556688999998875

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.49  E-value=0.00086  Score=61.78  Aligned_cols=109  Identities=14%  Similarity=0.086  Sum_probs=71.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCC-----CceEEEe-ccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN-----PRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      |++|.|.|+ |.+|..++..|+..|. +|++++++++............     ....+.. .|.  +.+.++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence            579999998 9999999999998875 9999999765433222111110     1122221 232  4578999999998


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      +...  ....+-.+.+..|+.-...+++...+...  .+|+++
T Consensus        79 ~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         79 GVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            7432  22234456677888888888888877654  455554

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.48  E-value=0.00093  Score=62.73  Aligned_cols=96  Identities=16%  Similarity=0.237  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC--------C--CceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR--------N--PRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~--------~--~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +++|+|+||||++|+++++.|++... +++.+.++.+...........        .  ..+.+...|  .+.+.++|+|
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~DvV   80 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTD--PEAVDDVDIV   80 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCC--HHHhcCCCEE
Confidence            46999999999999999999998765 888875554332222211110        0  111222112  1234689999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                      |.+...                +  -...+++.+.+.|+++|..|+.
T Consensus        81 f~a~p~----------------~--~s~~~~~~~~~~G~~vIDls~~  109 (349)
T PRK08664         81 FSALPS----------------D--VAGEVEEEFAKAGKPVFSNASA  109 (349)
T ss_pred             EEeCCh----------------h--HHHHHHHHHHHCCCEEEECCch
Confidence            876521                1  1134456666778877777764

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.44  E-value=0.00055  Score=58.13  Aligned_cols=69  Identities=28%  Similarity=0.434  Sum_probs=43.1

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--
Q 019794          115 RRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--  176 (335)
Q Consensus       115 ~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--  176 (335)
                      ++|+||||+|                ||.+|.+|++++..+|++|+++.....     +.   ....++.+..+-.++  
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-----~~---~p~~~~~i~v~sa~em~   73 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-----LP---PPPGVKVIRVESAEEML   73 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-----cc---ccccceEEEecchhhhh
Confidence            4667777754                799999999999999999999976521     10   123556666544333  


Q ss_pred             -----hccCCCEEEEccCCC
Q 019794          177 -----ILLEVDQIYHLACPA  191 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~  191 (335)
                           .+.+.|++||+|++.
T Consensus        74 ~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   74 EAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             HHHHHHGGGGSEEEE-SB--
T ss_pred             hhhccccCcceeEEEecchh
Confidence                 456789999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.42  E-value=0.00094  Score=62.51  Aligned_cols=98  Identities=15%  Similarity=0.200  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccC-CC---ceEEEeccccchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFR-NP---RFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |++|+|.||||++|+.+++.|.+. +.+++++.+... ..+.+..... ..   ...+.+.|  +....++|+||-+...
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLD--PEILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCC--HHHhcCCCEEEECCCc
Confidence            579999999999999999999987 458777666322 1111111111 00   11122222  2245679999986521


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                                        .....++..+.+.|+.+|=.|+..-+
T Consensus        79 ------------------~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         79 ------------------GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             ------------------HHHHHHHHHHHhCCCEEEECCcccCC
Confidence                              12335666677778888888886554

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.42  E-value=0.0011  Score=53.34  Aligned_cols=102  Identities=20%  Similarity=0.326  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEecc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRHD  172 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D  172 (335)
                      .++|+|.|+ |.+|+.+++.|.+.|. ++.++|.+.-...+.                      +.+..+...++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            358999995 9999999999999998 788888763221111                      0111122345566555


Q ss_pred             ccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          173 VVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       173 ~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      +.+    ..+.++|+||.+..                 |......+.+.|++.+..+|..++...+|
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCVD-----------------SLAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEESS-----------------SHHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccccccccccCCCEEEEecC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            532    35568999998752                 23344467778999988888888765443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.41  E-value=0.0016  Score=60.06  Aligned_cols=108  Identities=14%  Similarity=0.125  Sum_probs=73.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC----CceEEEe-ccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIR-HDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~D~~~~~~~~vD~Vih~A~  189 (335)
                      +||.|+|+ |.||..++..|+..|.  ++++++...........+....    ....+.. .|.  +.+.++|+||-+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy--~~~~~adivvitaG   80 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY--SVTANSKVVIVTAG   80 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH--HHhCCCCEEEECCC
Confidence            48999996 9999999999988875  7899988664333222221111    1113332 333  34899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ....  ...+-...++.|..-.+.+.+..++.+.  .++.+|
T Consensus        81 ~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          81 ARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            5322  2345567889999999999999888864  455555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.39  E-value=0.0029  Score=58.66  Aligned_cols=111  Identities=11%  Similarity=0.110  Sum_probs=73.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCcccccccc-----CCCceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHF-----RNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +.++|.|.|| |.+|..++..|+..| .+|++++.+.+.......+..     ......+...+.. +.+.++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEECC
Confidence            3569999997 999999999999888 689999987654322111110     0111222221222 3779999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      |....  ........+..|..-...+++...+.+.  .+|++|
T Consensus        82 g~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         82 GVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            75322  2234566788888888888888887764  455554

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.38  E-value=0.0012  Score=63.53  Aligned_cols=166  Identities=11%  Similarity=0.042  Sum_probs=95.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC---CC----eEEEEecC--CCCCcccccccc----CC-CceEEEeccccchhccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR---GD----EVIVIDNF--FTGRKDNLVHHF----RN-PRFELIRHDVVEPILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~---g~----~V~~~~r~--~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~vD  182 (335)
                      -+|+||||+|.||.+|+-.|+.=   |.    .+++++..  .........+..    .. ..+.+.  +-..+++.++|
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~~ea~~daD  201 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDLDVAFKDAH  201 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECCHHHhCCCC
Confidence            48999999999999999888762   42    35555552  111111111111    11 123333  22356889999


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +||-+||..  .....+-...++.|..-...+.++..+.+   .+++.+.|--+--..  ...    +.....+++....
T Consensus       202 vvIitag~p--rk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t--~i~----~k~apgiP~~rVi  273 (452)
T cd05295         202 VIVLLDDFL--IKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKT--SIL----IKYAPSIPRKNII  273 (452)
T ss_pred             EEEECCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHH--HHH----HHHcCCCCHHHEE
Confidence            999999852  22334567789999999999999988776   367666652110000  000    0000012222333


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      +.+.....++...++++.+++...|+-..|+|.
T Consensus       274 g~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGe  306 (452)
T cd05295         274 AVARLQENRAKALLARKLNVNSAGIKDVIVWGN  306 (452)
T ss_pred             EecchHHHHHHHHHHHHhCcCHHHceeeEEEEc
Confidence            333344455555566677777777766677765

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.38  E-value=0.00088  Score=65.02  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=50.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc-CCCEEEEccCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL-EVDQIYHLACPA  191 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~vD~Vih~A~~~  191 (335)
                      .++++|+|||++| +|.++++.|++.|++|++.++......... ..+....+.+..++.....+. ++|+||.++|..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEA-QELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHH-HHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            4578999999977 999999999999999999987543222111 112222344444333223334 399999998753

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.35  E-value=0.0027  Score=58.45  Aligned_cols=107  Identities=20%  Similarity=0.227  Sum_probs=74.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccC------CCceEEEeccccchhccCCCEEEEccC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR------NPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ||.|.|+ |.||..++..|+..+.  ++++++...........+...      ...+.+...|  .+.+.++|+||-+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--HHHhCCCCEEEECCC
Confidence            5789997 9999999999998875  799999865544333222211      1134444333  367899999999998


Q ss_pred             CCCCCCccCC--hhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYN--PVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ....+  ..+  -.+.++.|..-...+....++.+.  .++.+|
T Consensus        78 ~~~kp--g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          78 PSIDP--GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCCCC--CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            53221  222  367889999999999999998875  344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.35  E-value=0.0022  Score=57.79  Aligned_cols=109  Identities=17%  Similarity=0.099  Sum_probs=74.9

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC----CeEEEEecCCCCCcccccc---ccCC-CceEEEeccccchhccCCCEEEEccCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRG----DEVIVIDNFFTGRKDNLVH---HFRN-PRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g----~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |.|.||+|.+|..++..|+..|    .+|+++|.+++..+....+   .... ....+...+...+++.++|+||..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5789999999999999999988    6899999876543322211   1111 123333344445788999999999875


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ...  ....-......|+.-.+.+++..++.+.  .++.+|
T Consensus        81 ~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            322  2233455778899999999999988764  555554

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.34  E-value=0.003  Score=58.24  Aligned_cols=108  Identities=17%  Similarity=0.207  Sum_probs=73.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCC----CceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |+|.|.|+ |.+|..++..|+..|  .+|.+++++.........+....    ....+...|.  +.+.++|+||.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence            47999997 999999999999999  58999998765433211111100    1223333333  458999999999874


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .  .....+.......|+.-...+++..++.+.  .++.++
T Consensus        78 ~--~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          78 N--QKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            3  223345667788999999999998888764  444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=97.33  E-value=0.0029  Score=59.21  Aligned_cols=108  Identities=15%  Similarity=0.174  Sum_probs=74.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC----CceEEEe-ccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIR-HDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++|.|+|+ |.||+.++..|+..+.  ++++++.+.........+....    ....+.. .|  -+.+.++|+||-+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d--y~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD--YAVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC--HHHhCCCCEEEECCC
Confidence            69999996 9999999999998875  7999998765433322222111    1123332 23  245899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ...  ....+-...+..|+.-...+++..++.+.  .+|.+|
T Consensus       115 ~~~--k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        115 ARQ--IPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            532  22345567889999999999999888764  566665

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.32  E-value=0.0034  Score=50.91  Aligned_cols=98  Identities=17%  Similarity=0.156  Sum_probs=64.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEecccc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRHDVV  174 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~  174 (335)
                      +|+|.|+ |.+|+++++.|++.|. ++.++|.+.-...+.                      +....+..+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5889996 9999999999999998 788887653211100                      111112234444444443


Q ss_pred             c----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          175 E----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       175 ~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      +    ..+.+.|+||.+..                 |......+.++|++.+..+|..++...
T Consensus        80 ~~~~~~~~~~~diVi~~~d-----------------~~~~~~~l~~~~~~~~i~~i~~~~~g~  125 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAID-----------------NIAVRRALNRACKELGIPVIDAGGLGL  125 (143)
T ss_pred             hhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence            3    34678999998762                 234455677889998888888877543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.26  E-value=0.00026  Score=64.63  Aligned_cols=74  Identities=16%  Similarity=0.204  Sum_probs=54.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHh----CCCeEEEEecCCCCCcccccccc-----CCCceEEEeccccch-----hccCCCE
Q 019794          118 RIVVTGGAGFVGSHLVDKLID----RGDEVIVIDNFFTGRKDNLVHHF-----RNPRFELIRHDVVEP-----ILLEVDQ  183 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~----~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~-----~~~~vD~  183 (335)
                      -++|.||+||.|.++++++++    .+..+-+..|++.+..+.+....     +....-++.+|..|+     ....+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999999    67788899998766544332211     112223778888655     4567999


Q ss_pred             EEEccCCC
Q 019794          184 IYHLACPA  191 (335)
Q Consensus       184 Vih~A~~~  191 (335)
                      |+||+|+.
T Consensus        87 ivN~vGPy   94 (423)
T KOG2733|consen   87 IVNCVGPY   94 (423)
T ss_pred             EEeccccc
Confidence            99999864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.25  E-value=0.00049  Score=62.86  Aligned_cols=76  Identities=11%  Similarity=0.131  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCC--CCccccccccC--CCceEEEeccccc-----hhccCCCE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFT--GRKDNLVHHFR--NPRFELIRHDVVE-----PILLEVDQ  183 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~~r~~~--~~~~~~~~~~~--~~~~~~~~~D~~~-----~~~~~vD~  183 (335)
                      .++++++|||| |++|++++..|++.|++ |++++|+..  .+.+.+.+.+.  ...+.+...|+.+     ..+..+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            46789999998 89999999999999985 999999752  11222222111  1122333444433     24457899


Q ss_pred             EEEccCC
Q 019794          184 IYHLACP  190 (335)
Q Consensus       184 Vih~A~~  190 (335)
                      |||+-..
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9997643

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.22  E-value=0.0022  Score=60.10  Aligned_cols=98  Identities=14%  Similarity=0.176  Sum_probs=58.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCCCccccccccC---CC-ceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVI-DNFFTGRKDNLVHHFR---NP-RFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~-~r~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ++|.|.||||++|..+++.|.+. +.+++.+ ++... ....+...+.   .. ...+...|. ++.+.++|+||.+...
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEVHPHLRGLVDLNLEPIDE-EEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHhCccccccCCceeecCCH-HHhhcCCCEEEECCCc
Confidence            48999999999999999999987 4477744 43221 1111111111   10 112222222 2233589999987631


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                                        .....++..+.+.|+++|-.|+..-+
T Consensus        79 ------------------~~s~~~~~~~~~~G~~VIDlS~~fR~  104 (346)
T TIGR01850        79 ------------------GVSAELAPELLAAGVKVIDLSADFRL  104 (346)
T ss_pred             ------------------hHHHHHHHHHHhCCCEEEeCChhhhc
Confidence                              12346667777778889989986544

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.22  E-value=0.0028  Score=58.32  Aligned_cols=109  Identities=13%  Similarity=0.118  Sum_probs=71.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC-----CCceEEE-eccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELI-RHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |+|.|.|+ |++|..++..|+..|. +|++++...............     .....+. ..|..  .+.++|+||-++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~--~~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA--DTANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH--HhCCCCEEEEcCC
Confidence            58999996 9999999999999886 899999865432211111111     0111222 23432  3789999999987


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEec
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST  230 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS  230 (335)
                      ..  .....+....+..|+.-...+++...+.+.  .+|.+|-
T Consensus        79 ~p--~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LP--RKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CC--CCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            42  222334556788999999999998877754  4555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.22  E-value=0.0022  Score=60.58  Aligned_cols=109  Identities=11%  Similarity=0.067  Sum_probs=72.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-e----EEE--E--ecCCCCCccccccccCC-----CceEEEeccccchhccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-E----VIV--I--DNFFTGRKDNLVHHFRN-----PRFELIRHDVVEPILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~vD  182 (335)
                      -+|.|+|++|.+|.+++-.|+..+. .    |.+  +  +++.+.......+..+.     ..+.+..  -..+.+.++|
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~--~~y~~~kdaD  122 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI--DPYEVFEDAD  122 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec--CCHHHhCCCC
Confidence            4899999999999999999998864 3    333  3  44443333222222111     1222222  2346789999


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEe
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTS  229 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iS  229 (335)
                      +||-+||..  .....+-.+.++.|+.-.+.+.....+.. .  ++|.+|
T Consensus       123 IVVitAG~p--rkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       123 WALLIGAKP--RGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             EEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            999999853  22334667789999999999999998844 3  566666

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.21  E-value=0.0065  Score=56.32  Aligned_cols=111  Identities=12%  Similarity=0.097  Sum_probs=73.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccc-----cCCCceEEEe-ccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH-----FRNPRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      .+||.|.| +|.+|+.++..++..|. +|++++.++........+.     .......+.. .|.  +.+.++|+||.+|
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~ta   82 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIVTA   82 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEECC
Confidence            46899999 59999999999999895 8999998766432211111     1111233332 343  4789999999999


Q ss_pred             CCCCCCCc---cCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      +.......   +.+..+.+..|+.-.+.+++...+.+.  .++++|
T Consensus        83 g~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         83 GLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             CCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            85432211   114456778898888888888887764  455555

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.19  E-value=0.0047  Score=53.12  Aligned_cols=105  Identities=16%  Similarity=0.296  Sum_probs=66.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc------------------------cccccCCCceEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN------------------------LVHHFRNPRFEL  168 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~------------------------~~~~~~~~~~~~  168 (335)
                      .+..+|+|.|++| +|.++++.|+..|. +++++|.+.-...+.                        +.+..+..+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            3456899999755 99999999999998 788887763211110                        111112234444


Q ss_pred             Eecccc------chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          169 IRHDVV------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       169 ~~~D~~------~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      +..++.      ++.+.++|+||.+.                 .+......+-+.|++.+..+|+.++...||.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~-----------------d~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATE-----------------ENYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            444442      23466789998653                 1223333566889999989999988766653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.18  E-value=0.004  Score=58.25  Aligned_cols=100  Identities=15%  Similarity=0.165  Sum_probs=57.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC------CCc--eEEEeccccchhccCCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR------NPR--FELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~------~~~--~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ++|.|+|+||++|++|++.|.++.. +|..+..+.............      ...  .++...+...+.+.++|+||.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a   80 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA   80 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence            4799999999999999999988764 877774433222111111110      000  1111112222345789999987


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                      ...                ++  +..+...+.+.|+++|..|+..-+
T Consensus        81 ~p~----------------~~--s~~~~~~~~~~G~~VIDlsg~fR~  109 (341)
T TIGR00978        81 LPS----------------EV--AEEVEPKLAEAGKPVFSNASNHRM  109 (341)
T ss_pred             CCH----------------HH--HHHHHHHHHHCCCEEEECChhhcc
Confidence            631                11  123445666778888888876544

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.17  E-value=0.0019  Score=55.73  Aligned_cols=104  Identities=14%  Similarity=0.189  Sum_probs=67.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc----------------------ccccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD----------------------NLVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (335)
                      .+.++|+|.| .|.+|+++++.|+..|. +++++|.+.-...+                      .+....+...++.+.
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            4566899999 59999999999999997 88888876321110                      011111223344444


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ..+.+    +.+.++|+||.+..                 |...-..+-+.|.+.++.+|+.+....+|
T Consensus        98 ~~i~~~~~~~~~~~~D~Vi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        98 ERVTAENLELLINNVDLVLDCTD-----------------NFATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hcCCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            44432    35678999998652                 22333356678888888888887655444

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.14  E-value=0.0038  Score=54.94  Aligned_cols=104  Identities=15%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~  170 (335)
                      .+.++|+|.| .|.+|+++++.|++.|. +++++|.+.-...+.                      +.+..+...++.+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            4556899999 59999999999999998 777776653211110                      01111122445554


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      .++..    +.+.++|+||.+..                 |...-..+-+.|.+.++.+|+.+....+|
T Consensus        98 ~~i~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757          98 ERLDAENAEELIAGYDLVLDCTD-----------------NFATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             ceeCHHHHHHHHhCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            44422    35678999998762                 22233456788888888888877655443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.14  E-value=0.0039  Score=57.28  Aligned_cols=107  Identities=19%  Similarity=0.170  Sum_probs=72.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccc---cCC-CceEEEeccccchhccCCCEEEEccCCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHH---FRN-PRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      |.|.|+ |++|..++..|+..|  .++++++++.+.......+.   ... ....+...+. .+.+.++|+||.+||.. 
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p-   77 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAP-   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCC-
Confidence            467786 889999999999988  58999998765433222111   111 1122332222 35889999999999853 


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                       .....+-...+..|+.-.+.+++..++.+.  .++.+|
T Consensus        78 -~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          78 -RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence             222345667888999999999999988764  555555

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.11  E-value=0.0047  Score=54.81  Aligned_cols=105  Identities=12%  Similarity=0.095  Sum_probs=66.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccc----------------------ccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNL----------------------VHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|+ |++|+.+++.|++.|. +++++|.+.-...+..                      .+..+...++.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            345678999995 8999999999999997 8888877643221110                      011112234444


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ...+..    +.+.+.|+||.+.                 .|......+-++|.+.++.+|+.++...+|
T Consensus       100 ~~~i~~~~~~~~~~~~DlVvd~~-----------------D~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       100 NAKLDDAELAALIAEHDIVVDCT-----------------DNVEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             eccCCHHHHHHHhhcCCEEEEcC-----------------CCHHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            433322    3567899999876                 223333456688889888888876654444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.08  E-value=0.0038  Score=53.98  Aligned_cols=76  Identities=18%  Similarity=0.155  Sum_probs=57.2

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |.....++++|+|.|| |-+|..-++.|++.|++|++++....   +.+.......++.++..+.....+.+++.||-+.
T Consensus         2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at   77 (205)
T TIGR01470         2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQGGITWLARCFDADILEGAFLVIAAT   77 (205)
T ss_pred             CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECC
Confidence            4445678899999995 99999999999999999999876433   2222222335788888887777788899988543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.06  E-value=0.0017  Score=55.99  Aligned_cols=76  Identities=21%  Similarity=0.338  Sum_probs=55.2

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |.....++++|+|.|| |-+|...++.|++.|++|+++.+...   ..+........+.+...+.....+.++|+||-+.
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~---~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT   78 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELT---ENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT   78 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC---HHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence            5556788999999996 99999999999999999999875322   2222222334566666666666778899988654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.06  E-value=0.0053  Score=54.68  Aligned_cols=104  Identities=13%  Similarity=0.088  Sum_probs=66.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+.++|+|.|+ |.+|+.+++.|+..|. +++++|.+.-...+.                      +.+..+...++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            456679999997 9999999999999997 788877653221110                      1111122344445


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                      ...+..    +.+.++|+||.+..                 |...-..+-++|.+.+..+|+.++...+
T Consensus       108 ~~~i~~~~~~~~~~~~DiVi~~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g~~  159 (245)
T PRK05690        108 NARLDDDELAALIAGHDLVLDCTD-----------------NVATRNQLNRACFAAKKPLVSGAAIRME  159 (245)
T ss_pred             eccCCHHHHHHHHhcCCEEEecCC-----------------CHHHHHHHHHHHHHhCCEEEEeeeccCC
Confidence            544433    34678999998761                 2233335667888888888876554333

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.05  E-value=0.0054  Score=55.05  Aligned_cols=67  Identities=15%  Similarity=0.244  Sum_probs=41.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +++|.|+|++|.+|+.+++.+.+. +.+++.+...........      ....+...+..++.+.++|+||.++
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~------~~~~i~~~~dl~~ll~~~DvVid~t   68 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ------GALGVAITDDLEAVLADADVLIDFT   68 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc------CCCCccccCCHHHhccCCCEEEECC
Confidence            368999999999999999988865 567776543322111111      1112222233344456799999877

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.04  E-value=0.0049  Score=57.33  Aligned_cols=97  Identities=18%  Similarity=0.171  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      +.++|.|.||||++|..+++.|.++.+   ++..+....+ ....+.  +....+.+.  ++.+..+.++|+||.+++. 
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~s-aG~~~~--~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~-   76 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEES-AGETLR--FGGKSVTVQ--DAAEFDWSQAQLAFFVAGR-   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCc-CCceEE--ECCcceEEE--eCchhhccCCCEEEECCCH-
Confidence            456899999999999999999998543   6666543311 111111  111122222  4433344789999987631 


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                                       .....++..+.+.|+++|=.|+..-+
T Consensus        77 -----------------~~s~~~~~~~~~~g~~VIDlS~~fRl  102 (336)
T PRK08040         77 -----------------EASAAYAEEATNAGCLVIDSSGLFAL  102 (336)
T ss_pred             -----------------HHHHHHHHHHHHCCCEEEECChHhcC
Confidence                             12235566666677788888876543

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=97.03  E-value=0.005  Score=55.86  Aligned_cols=105  Identities=17%  Similarity=0.235  Sum_probs=71.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc----------------------ccccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD----------------------NLVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (335)
                      .+..+|||.|. |++|.++++.|+..|. +|.++|.+.-...+                      .+.+.-+..+++...
T Consensus        17 L~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~   95 (286)
T cd01491          17 LQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST   95 (286)
T ss_pred             HhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34568999995 8899999999999998 77777765321111                      111122334566666


Q ss_pred             ccccchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          171 HDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       171 ~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      .++..+.+.+.|+||.+..                 |...-..+-++|++.++.||...+...+|.
T Consensus        96 ~~~~~~~l~~fdvVV~~~~-----------------~~~~~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491          96 GPLTTDELLKFQVVVLTDA-----------------SLEDQLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             ccCCHHHHhcCCEEEEecC-----------------CHHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence            6666677888999987651                 233333566888888888998887666553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.02  E-value=0.0075  Score=51.82  Aligned_cols=104  Identities=18%  Similarity=0.287  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~  170 (335)
                      .+.++|+|.|+ |.+|.++++.|+..|. +++++|.+.-...+.                      +.+..+...++...
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            44568999986 5599999999999998 788887653211100                      11111223344444


Q ss_pred             cccc---chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVV---EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~---~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ..+.   .+.+.++|+||.+..                 |...-..+-+.|.+.+..+|+.++...+|
T Consensus        98 ~~~~~~~~~~~~~~dvVi~~~~-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G  148 (197)
T cd01492          98 DDISEKPEEFFSQFDVVVATEL-----------------SRAELVKINELCRKLGVKFYATGVHGLFG  148 (197)
T ss_pred             cCccccHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence            3332   234678999997541                 12223345578889888898888766554

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.01  E-value=0.0096  Score=51.80  Aligned_cols=105  Identities=17%  Similarity=0.228  Sum_probs=66.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc---c------------------cccccCCCceEEEec
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD---N------------------LVHHFRNPRFELIRH  171 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~---~------------------~~~~~~~~~~~~~~~  171 (335)
                      .+..+|+|.|+ |.+|+.+++.|++.|. +++++|.+.-...+   .                  +........++.+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            45668999995 9999999999999998 68888886211110   0                  001112223444444


Q ss_pred             cccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CCeEEEEecccccCC
Q 019794          172 DVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GAKFLLTSTSEVYGD  236 (335)
Q Consensus       172 D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~r~v~iSS~~v~~~  236 (335)
                      .+.+    +.+.++|+||.+.                 .|......+.+.|.+. +..+|+.+....|+.
T Consensus       105 ~i~~~~~~~~~~~~DvVI~a~-----------------D~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~~  157 (212)
T PRK08644        105 KIDEDNIEELFKDCDIVVEAF-----------------DNAETKAMLVETVLEHPGKKLVAASGMAGYGD  157 (212)
T ss_pred             ecCHHHHHHHHcCCCEEEECC-----------------CCHHHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence            4433    3567899999864                 2233334566778887 778888876555543

>PRK04148 hypothetical protein; Provisional

Probab=96.99  E-value=0.0044  Score=49.49  Aligned_cols=90  Identities=24%  Similarity=0.340  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhc---cCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---LEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~vD~Vih~A~~~  191 (335)
                      ++++|++.|. | -|..++..|.+.|++|+++|.++......     ....++++..|++++.+   .++|.|+..=   
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-----~~~~~~~v~dDlf~p~~~~y~~a~liysir---   85 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKA-----KKLGLNAFVDDLFNPNLEIYKNAKLIYSIR---   85 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHhCCeEEECcCCCCCHHHHhcCCEEEEeC---
Confidence            3468999995 5 78899999999999999999876532211     22357899999988744   5799998642   


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEE
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT  228 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~i  228 (335)
                             .+.++       ...+++.|++.++.+++.
T Consensus        86 -------pp~el-------~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         86 -------PPRDL-------QPFILELAKKINVPLIIK  108 (134)
T ss_pred             -------CCHHH-------HHHHHHHHHHcCCCEEEE
Confidence                   22222       337899999999854443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.95  E-value=0.00066  Score=61.58  Aligned_cols=77  Identities=13%  Similarity=0.148  Sum_probs=52.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      ..++|-|||||.|..++++|.++|.+-.+-.|+..+...-...+- ....+.+..-+..++.+...++|+||+|+...
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~   84 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTR   84 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccccc
Confidence            369999999999999999999999988777776543321111110 11223333344566677889999999997653

>PRK08223 hypothetical protein; Validated

Probab=96.90  E-value=0.0048  Score=55.83  Aligned_cols=103  Identities=14%  Similarity=0.030  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|+ |++|+.+++.|++.|. ++.++|.+.-...+.                      +.+..+..+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            345678999995 8999999999999998 888887763211110                      1111122345555


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                      ...+..    +.+.++|+||.+.-         +      .++..-..+-++|.+.++.+|+.+..
T Consensus       103 ~~~l~~~n~~~ll~~~DlVvD~~D---------~------~~~~~r~~ln~~c~~~~iP~V~~~~~  153 (287)
T PRK08223        103 PEGIGKENADAFLDGVDVYVDGLD---------F------FEFDARRLVFAACQQRGIPALTAAPL  153 (287)
T ss_pred             ecccCccCHHHHHhCCCEEEECCC---------C------CcHHHHHHHHHHHHHcCCCEEEEecc
Confidence            544433    45678999996541         1      11233346677899998888886543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.89  E-value=0.0016  Score=59.15  Aligned_cols=74  Identities=20%  Similarity=0.342  Sum_probs=49.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCC-CceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ...+++++|+|+ |.+|++++..|...| .+|+++.|+.+... .+.+.+.. ..+.+ ..+ ....+.++|+||++...
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~-~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~  195 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAE-ELAKLFGALGKAEL-DLE-LQEELADFDLIINATSA  195 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhccceee-ccc-chhccccCCEEEECCcC
Confidence            356789999996 999999999999999 69999999754322 22222111 11222 112 23456789999997643

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.87  E-value=0.0035  Score=57.80  Aligned_cols=34  Identities=24%  Similarity=0.295  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++|.|+| +|.+|..++..|++.|++|+++++++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            5899999 799999999999999999999999754

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.85  E-value=0.011  Score=55.63  Aligned_cols=105  Identities=16%  Similarity=0.095  Sum_probs=67.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|+ |++|+++++.|+..|. +++++|.+.-...+.                      +.+..+...++.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            346679999996 8999999999999998 888888764211110                      1111122344555


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ...+..    +.+.++|+||.+.                 .|...-..+-++|.+.++.+|+.+....+|
T Consensus       104 ~~~i~~~~~~~~~~~~DvVvd~~-----------------d~~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        104 VRRLTWSNALDELRDADVILDGS-----------------DNFDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             EeecCHHHHHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            545443    3567899999876                 223333346678888888888876544433

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.84  E-value=0.0075  Score=50.75  Aligned_cols=101  Identities=16%  Similarity=0.137  Sum_probs=62.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc---------------------cccccCCCceEEEeccccc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN---------------------LVHHFRNPRFELIRHDVVE  175 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~---------------------~~~~~~~~~~~~~~~D~~~  175 (335)
                      +|+|.|+ |.+|+.+++.|++.|. +++++|.+.-...+.                     +.+..+..+++.+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5889995 9999999999999998 699988874111000                     0011122234444433333


Q ss_pred             ----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CCeEEEEecccccCC
Q 019794          176 ----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GAKFLLTSTSEVYGD  236 (335)
Q Consensus       176 ----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~r~v~iSS~~v~~~  236 (335)
                          +.+.++|+||.+.                 .|...-..+.+.+.+. ++.+|+-+....|+.
T Consensus        80 ~~~~~~l~~~DlVi~~~-----------------d~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~  128 (174)
T cd01487          80 NNLEGLFGDCDIVVEAF-----------------DNAETKAMLAESLLGNKNKPVVCASGMAGFGD  128 (174)
T ss_pred             hhHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence                4567899999874                 2223334566777666 777887765554443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.82  E-value=0.0099  Score=55.42  Aligned_cols=97  Identities=14%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCe---EEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLID-RGDE---VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ++++|.|.||||++|+.+++.|.+ ....   +..+..... ....+  .+....+.+...|  ...+.++|+||.+++.
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~s-aGk~~--~~~~~~l~v~~~~--~~~~~~~Divf~a~~~   78 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRS-AGKTV--QFKGREIIIQEAK--INSFEGVDIAFFSAGG   78 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECccc-CCCCe--eeCCcceEEEeCC--HHHhcCCCEEEECCCh
Confidence            346899999999999999999985 4445   555543211 11111  1122233333333  3345789999987641


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                                        ..+..+...+.+.|+.+|=.||..-+
T Consensus        79 ------------------~~s~~~~~~~~~~G~~VID~Ss~fR~  104 (347)
T PRK06728         79 ------------------EVSRQFVNQAVSSGAIVIDNTSEYRM  104 (347)
T ss_pred             ------------------HHHHHHHHHHHHCCCEEEECchhhcC
Confidence                              12235566666778788888876554

>PRK08328 hypothetical protein; Provisional

Probab=96.82  E-value=0.005  Score=54.32  Aligned_cols=105  Identities=20%  Similarity=0.238  Sum_probs=65.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc-----------------------cccccCCCceEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN-----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~~~~  169 (335)
                      .+..+|+|.|+ |++|+++++.|++.|. +++++|.+.-...+.                       +....+...++..
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~  103 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF  103 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence            45668999995 8999999999999997 788887653211100                       0011122233433


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      ...+.+    +.+.++|+||.+..                 |...-..+-++|++.++.+|+.++...+|.
T Consensus       104 ~~~~~~~~~~~~l~~~D~Vid~~d-----------------~~~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        104 VGRLSEENIDEVLKGVDVIVDCLD-----------------NFETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             eccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            433322    24678999998652                 222233455788888889998887766654

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.82  E-value=0.0092  Score=54.86  Aligned_cols=100  Identities=15%  Similarity=0.270  Sum_probs=65.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEecccc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRHDVV  174 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~  174 (335)
                      +|+|.|+ |++|.++++.|+..|. ++.++|.+.-...+.                      +.+..+...++....++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899995 9999999999999998 788877653221111                      011112234555555554


Q ss_pred             c-----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          175 E-----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       175 ~-----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      +     +.+.+.|+||.+.                 .|...-..+-+.|...++.+|..++...+|
T Consensus        80 ~~~~~~~f~~~~DvVv~a~-----------------Dn~~ar~~in~~c~~~~ip~I~~gt~G~~G  128 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNAL-----------------DNLAARRHVNKMCLAADVPLIESGTTGFLG  128 (312)
T ss_pred             CccchHHHHhcCCEEEECC-----------------CCHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence            3     4567899999765                 234444566678888888888877665544

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.81  E-value=0.0039  Score=51.53  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=52.6

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEc
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .|...+.++++|+|.|| |-+|...++.|++.|++|+++...   ..+.+..   ...+.+......+..+.+.|+||-+
T Consensus         5 ~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~---~~~~l~~---l~~i~~~~~~~~~~dl~~a~lViaa   77 (157)
T PRK06719          5 YPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE---ICKEMKE---LPYITWKQKTFSNDDIKDAHLIYAA   77 (157)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc---cCHHHHh---ccCcEEEecccChhcCCCceEEEEC
Confidence            46677889999999995 999999999999999999988422   1122221   1244555555566667888988864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.80  E-value=0.0054  Score=58.21  Aligned_cols=104  Identities=19%  Similarity=0.213  Sum_probs=65.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc------------------cc----cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DN----LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~------------------~~----~~~~~~~~~~~~~  169 (335)
                      ..+.++|+|.|+ |++|+++++.|++.|. ++++++++.-...                  +.    +.+..+...++.+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            346678999975 8899999999999998 8888888621110                  00    1111122233344


Q ss_pred             ecccc----chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          170 RHDVV----EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       170 ~~D~~----~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                      ...+.    ++.+.++|+||.+..                 |...-..+-++|.+.++.+|+.+....+
T Consensus       211 ~~~~~~~~~~~~~~~~D~Vv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~g~~  262 (376)
T PRK08762        211 QERVTSDNVEALLQDVDVVVDGAD-----------------NFPTRYLLNDACVKLGKPLVYGAVFRFE  262 (376)
T ss_pred             eccCChHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCE
Confidence            33332    235678999998762                 1222234667888998888888754433

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.79  E-value=0.039  Score=54.24  Aligned_cols=168  Identities=17%  Similarity=0.249  Sum_probs=99.7

Q ss_pred             CCCCCCCCCeEEEEcCC-chhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccccc-----CCCceEEEeccccc-----h
Q 019794          109 PVGIGRRRLRIVVTGGA-GFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF-----RNPRFELIRHDVVE-----P  176 (335)
Q Consensus       109 p~~~~~~~~~vlVTGat-G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~-----~  176 (335)
                      |......++.++||||+ |.||.+++..|+.-|..|++...+.+... +..+.++     ....+-++..+...     .
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45556788999999986 79999999999999999998765443221 1111111     11122223322211     0


Q ss_pred             ---------------------hccCCCEEEEccCCCCCCCccC-Ch--hhHHhhHHHHHHHHHHHHHHcC----C----e
Q 019794          177 ---------------------ILLEVDQIYHLACPASPVHYKY-NP--VKTIKTNVMGTLNMLGLAKRVG----A----K  224 (335)
Q Consensus       177 ---------------------~~~~vD~Vih~A~~~~~~~~~~-~~--~~~~~~Nv~gt~~ll~~a~~~~----~----r  224 (335)
                                           ..-.+|.+|-.|++.......+ ..  +..+++-+-....++...++.+    +    +
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence                                 1123789999888654443222 12  2344555555556666555543    1    3


Q ss_pred             EEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCceeCCC
Q 019794          225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPR  293 (335)
Q Consensus       225 ~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v~Gp~  293 (335)
                      +|+-.|-+-                 --+.....|+.+|...+.++..+..+.    -+..+-.++|++-|.+
T Consensus       549 VVLPgSPNr-----------------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         549 VVLPGSPNR-----------------GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             EEecCCCCC-----------------CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            555454210                 123444789999999999998887764    2555666777777765

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.78  E-value=0.0083  Score=57.24  Aligned_cols=104  Identities=16%  Similarity=0.136  Sum_probs=66.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~  170 (335)
                      .+..+|+|.|+ |++|+.+++.|+..|. +++++|.+.-...+.                      +.+..+..+++.+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            45668999995 8999999999999998 788877653211110                      01111122344444


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ..+..    +.+.++|+||.+.                 .|...-..+-++|.+.++.+|+.+....+|
T Consensus       119 ~~i~~~~~~~~~~~~D~Vvd~~-----------------d~~~~r~~ln~~~~~~~~p~v~~~~~g~~G  170 (392)
T PRK07878        119 FRLDPSNAVELFSQYDLILDGT-----------------DNFATRYLVNDAAVLAGKPYVWGSIYRFEG  170 (392)
T ss_pred             ccCChhHHHHHHhcCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            44433    3567899999865                 233333346678888888888877665555

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.77  E-value=0.012  Score=53.99  Aligned_cols=83  Identities=17%  Similarity=0.210  Sum_probs=53.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      +.+|.|.||||++|..|++.|.++.. ++..+..+...            ..     +..+..+.++|+||.+...    
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------~~-----~~~~~~~~~~DvvFlalp~----   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------DA-----AARRELLNAADVAILCLPD----   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------cc-----cCchhhhcCCCEEEECCCH----
Confidence            45899999999999999998888764 55555432211            00     1223345679999976521    


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                                    .....++..+.+.|+++|=.|+..-
T Consensus        61 --------------~~s~~~~~~~~~~g~~VIDlSadfR   85 (313)
T PRK11863         61 --------------DAAREAVALIDNPATRVIDASTAHR   85 (313)
T ss_pred             --------------HHHHHHHHHHHhCCCEEEECChhhh
Confidence                          1122455555567888988888653

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.75  E-value=0.011  Score=54.39  Aligned_cols=106  Identities=14%  Similarity=0.095  Sum_probs=68.1

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc---cccC--CCceEEEe-ccccchhccCCCEEEEccCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV---HHFR--NPRFELIR-HDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~---~~~~--~~~~~~~~-~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      |.|.|+ |.+|..++..|+..|. +|++++++++.......   +...  .....+.. .|  .+.+.++|+||.+++..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d--~~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND--YEDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC--HHHhCCCCEEEEecCCC
Confidence            468897 9999999999998876 99999998653221111   1100  11122222 33  34689999999998743


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .  ....+..+.+..|+.-.+.+++...+...  .+|++|
T Consensus        78 ~--~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          78 R--KPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             C--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            2  22233445667788888888888877764  444444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.75  E-value=0.018  Score=50.65  Aligned_cols=101  Identities=13%  Similarity=0.160  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~  170 (335)
                      .+..+|+|.| .|.+|+++++.|++.|. +++++|.+.-...+.                      +.+..+..+++.+.
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            3556899999 58999999999999998 888887653211110                      00111122344444


Q ss_pred             ccccc----hhc-cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          171 HDVVE----PIL-LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       171 ~D~~~----~~~-~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      ..+..    ..+ .++|+||.+.                 .|+..-..+.+.|.+.+..+|...+..
T Consensus        88 ~~i~~~~~~~l~~~~~D~Vvdai-----------------D~~~~k~~L~~~c~~~~ip~I~s~g~g  137 (231)
T cd00755          88 EFLTPDNSEDLLGGDPDFVVDAI-----------------DSIRAKVALIAYCRKRKIPVISSMGAG  137 (231)
T ss_pred             eecCHhHHHHHhcCCCCEEEEcC-----------------CCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence            33331    223 3689999875                 223344567888999888887765543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.71  E-value=0.0088  Score=52.52  Aligned_cols=69  Identities=19%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A~  189 (335)
                      |+++|.|+ |-+|..+++.|.+.|++|++++++++...+...   .......+.+|.+++      -+.++|+++-+.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            57888885 999999999999999999999987654333222   124667788888776      2467899986553

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.70  E-value=0.0028  Score=57.31  Aligned_cols=73  Identities=19%  Similarity=0.286  Sum_probs=48.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC-CceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++++++|+|+ |.+|++++..|++.|++|++++|+.++.. .+.+.+.. .......  ..+....++|+||++.+.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~-~la~~~~~~~~~~~~~--~~~~~~~~~DivInatp~  188 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE-ELAERFQRYGEIQAFS--MDELPLHRVDLIINATSA  188 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhcCceEEec--hhhhcccCccEEEECCCC
Confidence            35679999997 89999999999999999999988654322 12211111 1122222  222334579999998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.67  E-value=0.0087  Score=55.03  Aligned_cols=99  Identities=17%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCC----ceEEEeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNP----RFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +++||.|.||+||.|.+|++.|+.+.. ++.++..+.. ....+.......    ...+...|.......+||+||-+.-
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalP   79 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-AGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALP   79 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-cCCchHHhCcccccccccccccCChhhhhcccCCEEEEecC
Confidence            367999999999999999999998865 7665554332 222222222211    1223333333334566999997542


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                        +.                ....++......++++|=.|.+.
T Consensus        80 --hg----------------~s~~~v~~l~~~g~~VIDLSadf  104 (349)
T COG0002          80 --HG----------------VSAELVPELLEAGCKVIDLSADF  104 (349)
T ss_pred             --ch----------------hHHHHHHHHHhCCCeEEECCccc
Confidence              10                12245555556677888888764

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.64  E-value=0.015  Score=51.24  Aligned_cols=100  Identities=17%  Similarity=0.194  Sum_probs=64.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEecccc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRHDVV  174 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D~~  174 (335)
                      +|+|.| .|++|.++++.|+..|. ++.++|.+.-...+.                      +.+..+..+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            588888 58999999999999998 888887763221110                      001112223444544442


Q ss_pred             ------chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          175 ------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       175 ------~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                            +..+.+.|+||.+.                 .|+..-..+-+.|.+.++.+|..++...+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~-----------------Dn~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNAL-----------------DNIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence                  23567899999864                 345555567778888887888777654443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.61  E-value=0.015  Score=44.42  Aligned_cols=90  Identities=20%  Similarity=0.231  Sum_probs=57.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      +.++++|+|.|| |-+|..=++.|++.|++|+++....    ...     ...+.+...+.. ..+.+.+.||-+.+   
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~-----~~~i~~~~~~~~-~~l~~~~lV~~at~---   69 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFS-----EGLIQLIRREFE-EDLDGADLVFAATD---   69 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHH-----HTSCEEEESS-G-GGCTTESEEEE-SS---
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhh-----hhHHHHHhhhHH-HHHhhheEEEecCC---
Confidence            467889999996 9999999999999999999997653    000     134445555543 56788998884331   


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                            +        -.-...+.+.|++.+ .++++...
T Consensus        70 ------d--------~~~n~~i~~~a~~~~-i~vn~~D~   93 (103)
T PF13241_consen   70 ------D--------PELNEAIYADARARG-ILVNVVDD   93 (103)
T ss_dssp             ---------------HHHHHHHHHHHHHTT-SEEEETT-
T ss_pred             ------C--------HHHHHHHHHHHhhCC-EEEEECCC
Confidence                  1        112235667776655 56666543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.59  E-value=0.02  Score=54.12  Aligned_cols=102  Identities=17%  Similarity=0.217  Sum_probs=65.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|+ |.+|+.+++.|+..|. +++++|.+.-...+.                      +.+..+..+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            456679999995 8999999999999997 888888763211110                      0111122344444


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      ...+..    +.+.++|+||.+.                 .|...-..+-++|.+.+..+|+.+...
T Consensus       117 ~~~i~~~~~~~~~~~~DlVid~~-----------------Dn~~~r~~in~~~~~~~iP~v~~~~~g  166 (370)
T PRK05600        117 RERLTAENAVELLNGVDLVLDGS-----------------DSFATKFLVADAAEITGTPLVWGTVLR  166 (370)
T ss_pred             eeecCHHHHHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence            444432    3577899999876                 233444456678888887777766543

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=96.54  E-value=0.019  Score=51.76  Aligned_cols=106  Identities=20%  Similarity=0.238  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccc------cCCCc-----------eEEEecc----
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH------FRNPR-----------FELIRHD----  172 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~------~~~~~-----------~~~~~~D----  172 (335)
                      .+.=|+|.|+ |++|++++..|++.|. ++.+++-+.-+......+-      ...++           +-+...|    
T Consensus        73 ~~syVVVVG~-GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~~  151 (430)
T KOG2018|consen   73 TNSYVVVVGA-GGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARNM  151 (430)
T ss_pred             cCcEEEEEec-CchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHHh
Confidence            3445777785 8899999999999998 6666655432211100000      00000           1111111    


Q ss_pred             -----ccch-hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCC
Q 019794          173 -----VVEP-ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL  238 (335)
Q Consensus       173 -----~~~~-~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~  238 (335)
                           -.++ .+.++|.|+.|.                 .|++.-..++++|-.+|.++|-...+++-+++.
T Consensus       152 l~~~~s~edll~gnPdFvvDci-----------------DNidtKVdLL~y~~~~~l~Viss~GaaaksDPT  206 (430)
T KOG2018|consen  152 LWTSSSEEDLLSGNPDFVVDCI-----------------DNIDTKVDLLEYCYNHGLKVISSTGAAAKSDPT  206 (430)
T ss_pred             hcCCCchhhhhcCCCCeEeEhh-----------------hhhhhhhHHHHHHHHcCCceEeccCccccCCCc
Confidence                 1112 456699999887                 677777789999999987776544444444443

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.51  E-value=0.0036  Score=54.74  Aligned_cols=36  Identities=28%  Similarity=0.465  Sum_probs=32.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      |+|.|.||+|.+|+.++..|.+.|++|.+.+|+.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            589999999999999999999999999999886543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.49  E-value=0.0049  Score=50.46  Aligned_cols=74  Identities=16%  Similarity=0.277  Sum_probs=47.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++++|+|+|+ |.+|..+++.|.+.| .+|++++|+.+...... ..+....+.....| ..+.+.++|+||.+...
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~Dvvi~~~~~   91 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALA-ERFGELGIAIAYLD-LEELLAEADLIINTTPV   91 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH-HHHhhcccceeecc-hhhccccCCEEEeCcCC
Confidence            44679999997 999999999999996 78999988654332211 11111101111122 22336889999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.45  E-value=0.044  Score=49.32  Aligned_cols=102  Identities=15%  Similarity=0.103  Sum_probs=62.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc----------------------cccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV----------------------HHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~----------------------~~~~~~~~~~~~  170 (335)
                      ++..+|+|.| .|.+|+++++.|++.|. ++++++.+.-...+...                      ...+...++.+.
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            4566899998 58999999999999995 88888876322111000                      001112233332


Q ss_pred             cccc----chhc-cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          171 HDVV----EPIL-LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       171 ~D~~----~~~~-~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      .-+.    ++.+ .++|+||.+..                 ++..-..+.+.|.+.+..+|.+.++..
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD-----------------~~~~k~~L~~~c~~~~ip~I~~gGag~  157 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAID-----------------SVRPKAALIAYCRRNKIPLVTTGGAGG  157 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEECCccc
Confidence            2111    1233 36899998762                 223334678889998888887765543

>PRK07411 hypothetical protein; Validated

Probab=96.43  E-value=0.019  Score=54.69  Aligned_cols=105  Identities=14%  Similarity=0.077  Sum_probs=66.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|+ |++|+.+++.|+..|. +++++|.+.-...+.                      +.+..+..+++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            456679999995 8899999999999998 777777653211110                      1111122345555


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ...+..    +.+.++|+||.+..                 |...-..+-++|.+.++.+|+.+...-+|
T Consensus       114 ~~~~~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        114 ETRLSSENALDILAPYDVVVDGTD-----------------NFPTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             ecccCHHhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            555543    35678999998762                 22333345577888887788766544444

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.40  E-value=0.033  Score=51.11  Aligned_cols=105  Identities=17%  Similarity=0.143  Sum_probs=71.5

Q ss_pred             EEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccC-----CCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          121 VTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR-----NPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       121 VTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      |.| .|.||..++..|+..+.  ++++++...........+...     .....+...  ..+.+.++|+||-+||... 
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~--~~~~~~daDivVitag~~r-   76 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG--DYSDCKDADLVVITAGAPQ-   76 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC--CHHHHCCCCEEEECCCCCC-
Confidence            346 59999999999988875  799998865544333222211     122333322  2367899999999998532 


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEec
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTST  230 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS  230 (335)
                       ....+-...++.|+.-.+.+.+..++.+.  .++.+|-
T Consensus        77 -k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        77 -KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence             22345667899999999999999988764  5666663

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.38  E-value=0.033  Score=52.23  Aligned_cols=92  Identities=17%  Similarity=0.184  Sum_probs=54.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHH-hCCC---eEEEEecCCCCCccccccccCCCceEEEeccccch-hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLI-DRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll-~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~vD~Vih~A~~~  191 (335)
                      |+|.|.||||-+|+.+++.|. ++..   +++.+.......+   ...+.....  ...++.+. .+.++|++|.++|. 
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~---~~~f~~~~~--~v~~~~~~~~~~~vDivffa~g~-   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQA---APSFGGTTG--TLQDAFDIDALKALDIIITCQGG-   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCC---cCCCCCCcc--eEEcCcccccccCCCEEEEcCCH-
Confidence            479999999999999999998 5454   3444433211111   111111222  33344443 67899999998851 


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCe--EEEEecc
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTSTS  231 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r--~v~iSS~  231 (335)
                                       .-+..+...+.+.|..  +|=-||.
T Consensus        75 -----------------~~s~~~~p~~~~aG~~~~VIDnSSa   99 (366)
T TIGR01745        75 -----------------DYTNEIYPKLRESGWQGYWIDAASS   99 (366)
T ss_pred             -----------------HHHHHHHHHHHhCCCCeEEEECChh
Confidence                             1234667777888843  4444443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.34  E-value=0.011  Score=49.50  Aligned_cols=56  Identities=20%  Similarity=0.224  Sum_probs=44.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ...+++|+|.|+++.+|..+++.|.++|.+|+++.|..                     +-..+.+.++|+||.+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~   96 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVG   96 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCC
Confidence            46789999999866789999999999999998887741                     112345778999998775

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.047  Score=48.41  Aligned_cols=73  Identities=14%  Similarity=0.189  Sum_probs=42.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEE-EEecCCCCCc-cccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVI-VIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~-~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +++|.|.|++|-+|+.|++.+.+... ++. +++|...... ....+......+.+...|.......++|++|...
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV~IDFT   77 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDDLLLVKADADVLIDFT   77 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecchhhcccCCCEEEECC
Confidence            67999999999999999999998863 544 4555433221 1111111112222222232344556678888765

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.30  E-value=0.0061  Score=52.53  Aligned_cols=37  Identities=30%  Similarity=0.399  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      ..++|+|+|+|. |.+|+.+++.|.+.|++|++.+++.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            467889999997 7999999999999999999888764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.29  E-value=0.027  Score=51.57  Aligned_cols=81  Identities=17%  Similarity=0.182  Sum_probs=52.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHY  196 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~  196 (335)
                      +|.|.||+||.|.+|++.|+...+ ++..+.-...              ++  ..| .++.+.++|+||.+...      
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~--~~~-~~~~~~~~D~vFlalp~------   59 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KD--AAE-RAKLLNAADVAILCLPD------   59 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cC--cCC-HhHhhcCCCEEEECCCH------
Confidence            799999999999999999998754 5655532211              10  011 22344679999976521      


Q ss_pred             cCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          197 KYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                                  ..+..++..+.+.|+++|=.|+..-
T Consensus        60 ------------~~s~~~~~~~~~~g~~VIDlSadfR   84 (310)
T TIGR01851        60 ------------DAAREAVSLVDNPNTCIIDASTAYR   84 (310)
T ss_pred             ------------HHHHHHHHHHHhCCCEEEECChHHh
Confidence                        1122455555567788888887643

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.29  E-value=0.0042  Score=57.78  Aligned_cols=73  Identities=21%  Similarity=0.167  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh---c--cCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---L--LEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~--~~vD~Vih~A~  189 (335)
                      +.+|||+||+|.+|...+.-+...|+.++++..+.++.. .+.+......+++.+.|..+..   .  .++|+|+..-|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            679999999999999999888888877666665443333 3333333334555556654442   2  25999999875

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.28  E-value=0.0061  Score=52.26  Aligned_cols=67  Identities=21%  Similarity=0.141  Sum_probs=42.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ||++.| ||+|-||+.++++|.+.|++|++..|+..+........+.. .   +.+--.+++...+|+||-.
T Consensus         1 m~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~-~---i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP-L---ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc-c---cccCChHHHHhcCCEEEEe
Confidence            355666 55899999999999999999999866554433322222111 1   3333334455668888753

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.28  E-value=0.031  Score=54.82  Aligned_cols=75  Identities=21%  Similarity=0.182  Sum_probs=50.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+++|+|.|+ |++|.++++.|.++|++|+++++............+....+.+..++... ...++|.||...|.
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGW   88 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCc
Confidence            45779999996 88999999999999999999986543222222222233345555443322 34568999988775

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.24  E-value=0.0066  Score=55.33  Aligned_cols=70  Identities=14%  Similarity=0.089  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+++++|+|. |.+|+.+++.|...|.+|++.+|+....... .    ......+..+..++.+.++|+||++.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~----~~g~~~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI-T----EMGLIPFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H----HCCCeeecHHHHHHHhccCCEEEECC
Confidence            457889999996 8899999999999999999999865422111 0    11223333333455678999999965

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.24  E-value=0.042  Score=48.00  Aligned_cols=77  Identities=12%  Similarity=0.261  Sum_probs=57.9

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEc
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .|+....++++|||.|| |-++..=++.|++.|++|+++.-...   ..+........+.++..+.....+.+++.||-+
T Consensus        17 ~pi~l~~~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~---~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaA   92 (223)
T PRK05562         17 MFISLLSNKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFS---KEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIA   92 (223)
T ss_pred             eeeEEECCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCcEEEEC
Confidence            56677788999999996 99999989999999999999865322   222223344578888877777778889988854


Q ss_pred             c
Q 019794          188 A  188 (335)
Q Consensus       188 A  188 (335)
                      .
T Consensus        93 T   93 (223)
T PRK05562         93 T   93 (223)
T ss_pred             C
Confidence            3

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.22  E-value=0.033  Score=51.20  Aligned_cols=26  Identities=35%  Similarity=0.535  Sum_probs=23.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD  141 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~  141 (335)
                      +++|.|.||||-+|+.+++.|.++..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            46899999999999999999999754

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.18  E-value=0.13  Score=46.39  Aligned_cols=96  Identities=19%  Similarity=0.289  Sum_probs=53.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEec-CCCCC-ccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDN-FFTGR-KDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      ++|.|.|++|.+|+.+++.+.+. +.+++++.. ..... ..............+...+..++...++|+||.+..+   
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~~~~d~~~l~~~~DvVIdfT~p---   78 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIGKVGVPVTDDLEAVETDPDVLIDFTTP---   78 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcCcCCceeeCCHHHhcCCCCEEEECCCh---
Confidence            58999999999999999999875 667776554 22111 1111111010011111112222223568999986521   


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                                     .....++..|.+.|+.+|.-++
T Consensus        79 ---------------~~~~~~~~~al~~g~~vVigtt  100 (266)
T TIGR00036        79 ---------------EGVLNHLKFALEHGVRLVVGTT  100 (266)
T ss_pred             ---------------HHHHHHHHHHHHCCCCEEEECC
Confidence                           2234566677777766665444

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.14  E-value=0.069  Score=47.66  Aligned_cols=112  Identities=21%  Similarity=0.161  Sum_probs=69.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCC-CCccccccccCCCceEEEe-ccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFT-GRKDNLVHHFRNPRFELIR-HDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~vD~Vih~A~  189 (335)
                      .+-+|.|.||+|+||+-|. .|++..+   ++.+.|.... .-...+.+.-....+.-+. .|-...++.++|+|+--||
T Consensus        27 ~~~KVAvlGAaGGIGQPLS-LLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLS-LLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             CcceEEEEecCCccCccHH-HHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCC
Confidence            3458999999999999996 5556665   3333333211 1112222222222232222 3456668899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..-  ..-..-+..|++|..-...+..++.+...  .+.+||
T Consensus       106 VPR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  106 VPR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            532  22234567889999999999999888754  455554

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.13  E-value=0.039  Score=51.84  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-Ce---EEEEecCCCCCccccccccCCCceEEEecccc-chhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-DE---VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~vD~Vih~A~~  190 (335)
                      |++|.|.||||++|+.+++.|+++. ..   ++.+........  . ..+....  ....+.. ...+.++|+||.+++.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~--~-~~f~g~~--~~v~~~~~~~~~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGA--A-PSFGGKE--GTLQDAFDIDALKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCc--c-cccCCCc--ceEEecCChhHhcCCCEEEECCCH
Confidence            3689999999999999999666654 34   555443211111  1 1111111  1222333 2346789999987741


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCe--EEEEeccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTSTSE  232 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r--~v~iSS~~  232 (335)
                                        .-+..+...+.+.|.+  +|=.||..
T Consensus        76 ------------------~~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         76 ------------------DYTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             ------------------HHHHHHHHHHHhCCCCeEEEECChHH
Confidence                              1233566666677754  55555544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.10  E-value=0.011  Score=53.90  Aligned_cols=73  Identities=18%  Similarity=0.205  Sum_probs=48.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC--CCceEEEeccccchhccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ..+++|+|.|+ |+.|++++..|.+.|. +|++++|+..+... +.+.+.  .....+...+...+.+.++|+||++.
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~-la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAA-LADELNARFPAARATAGSDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence            45679999996 7899999999999997 89999887543322 221111  11233333333334567899999983

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.06  E-value=0.015  Score=52.85  Aligned_cols=56  Identities=16%  Similarity=0.205  Sum_probs=44.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++|+|.|++|.+|+.++..|+++|+.|+++.+..    ..                 ..+.+.++|+||++.|
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----~~-----------------L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----QN-----------------LPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----hh-----------------HHHHhccCCEEEEccC
Confidence            46889999999999999999999999999988886521    11                 1123368899999885

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.05  E-value=0.062  Score=49.32  Aligned_cols=95  Identities=13%  Similarity=0.081  Sum_probs=61.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      ++|.| ||||-+|+.+++.|.+++.   +++++.....+....  -.+  ..-++...++.+..+.++|++|. +|.   
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~--i~f--~g~~~~V~~l~~~~f~~vDia~f-ag~---   74 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQG--IRF--NNKAVEQIAPEEVEWADFNYVFF-AGK---   74 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCE--EEE--CCEEEEEEECCccCcccCCEEEE-cCH---
Confidence            47999 9999999999999998886   455554321111111  111  12345555666777899999998 752   


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                                     .........+.+.|+.+|=-||..-+.
T Consensus        75 ---------------~~s~~~ap~a~~aG~~VIDnSsa~Rmd  101 (322)
T PRK06901         75 ---------------MAQAEHLAQAAEAGCIVIDLYGICAAL  101 (322)
T ss_pred             ---------------HHHHHHHHHHHHCCCEEEECChHhhCC
Confidence                           123356666778888888778765443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.05  E-value=0.071  Score=45.90  Aligned_cols=35  Identities=23%  Similarity=0.311  Sum_probs=31.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNF  149 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~  149 (335)
                      .+.++|+|.|+ |.+|+.++..|++.|. +++++|.+
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45568999996 8899999999999998 79999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.04  E-value=0.062  Score=42.14  Aligned_cols=31  Identities=26%  Similarity=0.612  Sum_probs=26.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC-CCeEEEEec
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDN  148 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r  148 (335)
                      ++.|+|++|.+|..+++.|.+. +.++..+..
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~   32 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA   32 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence            5789999999999999999985 678877733

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.92  E-value=0.011  Score=53.77  Aligned_cols=75  Identities=16%  Similarity=0.029  Sum_probs=47.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCC-CceEEEec-cccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN-PRFELIRH-DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++++++|.|+ |+.|++++..|.+.|. +|+++.|+.++.. .+.+.+.. ..+..+.. +.....+.++|+||++...
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~-~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLS-RLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            45789999985 9999999999999997 7999988754332 22222211 11111111 1112345779999998643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.90  E-value=0.042  Score=53.62  Aligned_cols=76  Identities=16%  Similarity=0.212  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+++|+|.| .|..|..+++.|.+.|++|.+.++............+....+.+..++...+.+.++|.||...|.
T Consensus        12 ~~~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi   87 (458)
T PRK01710         12 IKNKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM   87 (458)
T ss_pred             hcCCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence            3467999998 588999999999999999999987643221111111223345555554444456789999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.87  E-value=0.15  Score=49.52  Aligned_cols=121  Identities=12%  Similarity=0.065  Sum_probs=70.1

Q ss_pred             EEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCccCCh
Q 019794          121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNP  200 (335)
Q Consensus       121 VTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~  200 (335)
                      |+||+|.+|.+++..|...|.+|+...+.....     .....               .+++.+++-+-   ..   ...
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-----~~~~~---------------~~~~~~~~d~~---~~---~~~   96 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-----AAGWG---------------DRFGALVFDAT---GI---TDP   96 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc-----ccCcC---------------CcccEEEEECC---CC---CCH
Confidence            778889999999999999999999875543211     00001               13343332221   00   111


Q ss_pred             hhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh--C
Q 019794          201 VKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA--G  278 (335)
Q Consensus       201 ~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~  278 (335)
                      ...... .......++... .+.+||+++|.....                   ....|+.+|...+.+++.+++|.  +
T Consensus        97 ~~l~~~-~~~~~~~l~~l~-~~griv~i~s~~~~~-------------------~~~~~~~akaal~gl~rsla~E~~~g  155 (450)
T PRK08261         97 ADLKAL-YEFFHPVLRSLA-PCGRVVVLGRPPEAA-------------------ADPAAAAAQRALEGFTRSLGKELRRG  155 (450)
T ss_pred             HHHHHH-HHHHHHHHHhcc-CCCEEEEEccccccC-------------------CchHHHHHHHHHHHHHHHHHHHhhcC
Confidence            111110 112222222222 234899998864421                   11359999999999999998875  6


Q ss_pred             CcEEEEEeCc
Q 019794          279 VEVRIARIFN  288 (335)
Q Consensus       279 i~~~ivRp~~  288 (335)
                      +.+..+.|+.
T Consensus       156 i~v~~i~~~~  165 (450)
T PRK08261        156 ATAQLVYVAP  165 (450)
T ss_pred             CEEEEEecCC
Confidence            7888887753

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.86  E-value=0.034  Score=48.22  Aligned_cols=75  Identities=19%  Similarity=0.279  Sum_probs=54.2

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEE
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih  186 (335)
                      .|.....++++|+|.|| |-+|..=++.|++.|.+|+++.-..   ..++.......+++++..+.....+.+++.||-
T Consensus         4 lPl~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lvia   78 (210)
T COG1648           4 LPLFLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVIA   78 (210)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEEE
Confidence            46677788999999995 9999999999999999999987644   233333334455666664444455566777764

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.84  E-value=0.018  Score=54.53  Aligned_cols=35  Identities=23%  Similarity=0.371  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      ..++|.|.||.|.+|..++..|.+.|++|++.+++
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            45799999999999999999999999999999874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.84  E-value=0.05  Score=52.82  Aligned_cols=71  Identities=23%  Similarity=0.303  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~  187 (335)
                      ..+++|+|.|+ |.+|..+++.|.+.|++|++++++++.... +...  ...+.++.+|..++      .+.++|.||-+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~-~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEE-LAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence            34679999997 999999999999999999999886543221 1111  12466788888765      34578998854


Q ss_pred             c
Q 019794          188 A  188 (335)
Q Consensus       188 A  188 (335)
                      .
T Consensus       305 ~  305 (453)
T PRK09496        305 T  305 (453)
T ss_pred             C
Confidence            4

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.83  E-value=0.069  Score=51.30  Aligned_cols=100  Identities=16%  Similarity=0.163  Sum_probs=64.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC------eEEEEecCCCCCcccc----------------------ccccCCCceEEE
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD------EVIVIDNFFTGRKDNL----------------------VHHFRNPRFELI  169 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~------~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~~~  169 (335)
                      +|+|.| .|+||.++++.|+..|.      +++++|.+.-...+..                      .+.-+..+++..
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            588998 58999999999999997      7888877532211110                      011112234444


Q ss_pred             ecccc--------chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          170 RHDVV--------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       170 ~~D~~--------~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ...+.        +..+.+.|+||.+.                 .|+..-..+-+.|...++.+|..++...+|
T Consensus        80 ~~~v~~~~~~~~~~~f~~~~DvVi~al-----------------Dn~~aR~~vn~~C~~~~iPli~~gt~G~~G  136 (435)
T cd01490          80 QNRVGPETEHIFNDEFWEKLDGVANAL-----------------DNVDARMYVDRRCVYYRKPLLESGTLGTKG  136 (435)
T ss_pred             ecccChhhhhhhhHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHhCCCEEEEeccccee
Confidence            43332        23456789998754                 455555677788988888888877765554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.82  E-value=0.0076  Score=50.07  Aligned_cols=65  Identities=20%  Similarity=0.133  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |++|.+.| .|-+|+.+++.|++.|++|++.+|+.+........     .  ...++...+...++|+||-+-
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-----g--~~~~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-----G--AEVADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-----T--EEEESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-----h--hhhhhhhhhHhhcccceEeec
Confidence            57899999 59999999999999999999998864332221111     1  444555566677889999765

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.80  E-value=0.04  Score=53.52  Aligned_cols=71  Identities=21%  Similarity=0.237  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch
Q 019794          113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP  176 (335)
Q Consensus       113 ~~~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~  176 (335)
                      +++||+||||+|                ||.+|.+|++++..+|++|+++.-...     +.   ....++++..+-.++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-----~~---~p~~v~~i~V~ta~e  324 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-----LA---DPQGVKVIHVESARQ  324 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-----CC---CCCCceEEEecCHHH
Confidence            478999999986                799999999999999999999863211     11   123345555443322


Q ss_pred             ------hccCCCEEEEccCCC
Q 019794          177 ------ILLEVDQIYHLACPA  191 (335)
Q Consensus       177 ------~~~~vD~Vih~A~~~  191 (335)
                            .....|++|++|++.
T Consensus       325 M~~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        325 MLAAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHHHhhCCCCEEEEecccc
Confidence                  112379999999864

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.76  E-value=0.016  Score=53.03  Aligned_cols=69  Identities=16%  Similarity=0.119  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ..+++++|.|. |.+|+.++..|.+.|.+|++++|+...... ..    ...+..+..+...+.+.++|+||++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~----~~G~~~~~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR-IT----EMGLSPFHLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH----HcCCeeecHHHHHHHhCCCCEEEECC
Confidence            45789999996 889999999999999999999987443211 11    11233333333445678899999975

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.72  E-value=0.018  Score=57.06  Aligned_cols=38  Identities=21%  Similarity=0.309  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ..++++++|+|+ |++|++++..|++.|++|+++.|+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e  413 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYE  413 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            356789999998 89999999999999999999888643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.70  E-value=0.06  Score=52.27  Aligned_cols=67  Identities=21%  Similarity=0.309  Sum_probs=49.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      |+|+|.|+ |.+|.++++.|.+.|++|+++++++..... +.   ....+.++.+|..++      .+.++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~-~~---~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR-LQ---DRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HH---hhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            58999997 999999999999999999999886543221 11   113567778887654      256799998765

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.66  E-value=0.016  Score=52.58  Aligned_cols=73  Identities=15%  Similarity=0.123  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEE-eccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELI-RHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~vD~Vih~A  188 (335)
                      .|+++.|+|+.| +|.-=++--.+.|.+|++++++..++++....+-.+.-++.. +.|...+...--|.++|++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v  254 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV  254 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence            678999999988 998776666667999999999876655555443222233344 4556666666566666655

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.63  E-value=0.048  Score=57.80  Aligned_cols=94  Identities=17%  Similarity=0.211  Sum_probs=57.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC-Ce-------------EEEEecCCCCCccccccccCCCceEEEeccccch---
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DE-------------VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---  176 (335)
                      ..+++|+|.|+ |+||+.+++.|++.. .+             |.+.+++..... .+....  ..++.+..|+.|.   
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~-~la~~~--~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK-ETVEGI--ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH-HHHHhc--CCCceEEeecCCHHHH
Confidence            35789999996 999999999998763 23             666655432221 122211  2444556655442   


Q ss_pred             --hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          177 --ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                        .+.++|+||++....                  -...++++|.+.|+.++-.|
T Consensus       643 ~~~v~~~DaVIsalP~~------------------~H~~VAkaAieaGkHvv~ek  679 (1042)
T PLN02819        643 LKYVSQVDVVISLLPAS------------------CHAVVAKACIELKKHLVTAS  679 (1042)
T ss_pred             HHhhcCCCEEEECCCch------------------hhHHHHHHHHHcCCCEEECc
Confidence              346799999976321                  01356666777766555444

>PRK07877 hypothetical protein; Provisional

Probab=95.61  E-value=0.058  Score=55.19  Aligned_cols=99  Identities=18%  Similarity=0.143  Sum_probs=65.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.|. | +|+.++..|++.|.  +++++|.+.-...+.                     +.......+++.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            456789999999 7 99999999999994  888887753211110                     0111122345556


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      ...+..    +.+.++|+||.+.                 .|+..-..+-++|.+.++.+|+-++
T Consensus       182 ~~~i~~~n~~~~l~~~DlVvD~~-----------------D~~~~R~~ln~~a~~~~iP~i~~~~  229 (722)
T PRK07877        182 TDGLTEDNVDAFLDGLDVVVEEC-----------------DSLDVKVLLREAARARRIPVLMATS  229 (722)
T ss_pred             eccCCHHHHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEcC
Confidence            555543    3567899999976                 2344444566788898888887775

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.61  E-value=0.058  Score=49.82  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=48.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+++|.|.| .|.||+.+++.|...|.+|++.++......         ....+...+-.++.+.++|+|+.+.
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~~~~~~l~e~l~~aDvvv~~l  198 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSFAGREELSAFLSQTRVLINLL  198 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------CceeecccccHHHHHhcCCEEEECC
Confidence            45789999999 799999999999999999999987432211         0011122344567788999998765

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=95.60  E-value=0.089  Score=50.73  Aligned_cols=76  Identities=18%  Similarity=0.093  Sum_probs=55.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      ..+|+|+|.| -|--|..+++.|.+.|+.|++.|.++.... ..........+++..+...+....++|+||-+-|+.
T Consensus         5 ~~~~kv~V~G-LG~sG~a~a~~L~~~G~~v~v~D~~~~~~~-~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~   80 (448)
T COG0771           5 FQGKKVLVLG-LGKSGLAAARFLLKLGAEVTVSDDRPAPEG-LAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIP   80 (448)
T ss_pred             ccCCEEEEEe-cccccHHHHHHHHHCCCeEEEEcCCCCccc-hhhhhhhccCceeecCccchhccccCCEEEECCCCC
Confidence            3488999999 588899999999999999999997655411 111122234566666655556778899999988753

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.59  E-value=0.0074  Score=50.95  Aligned_cols=70  Identities=17%  Similarity=0.128  Sum_probs=47.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .....+++|.|.| .|-||+.+++.|...|.+|++.+|....... .    ....+   ..+-.++.+..+|+|+.+..
T Consensus        31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~----~~~~~---~~~~l~ell~~aDiv~~~~p  100 (178)
T PF02826_consen   31 GRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-A----DEFGV---EYVSLDELLAQADIVSLHLP  100 (178)
T ss_dssp             BS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-H----HHTTE---EESSHHHHHHH-SEEEE-SS
T ss_pred             ccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhh-c----ccccc---eeeehhhhcchhhhhhhhhc
Confidence            3456789999998 6999999999999999999999986443220 0    01111   33355667888999987653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.59  E-value=0.12  Score=50.18  Aligned_cols=74  Identities=15%  Similarity=0.121  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-cccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+++|+|+|+ |.+|.++++.|.++|++|.+.+....... ..+...  ...+.+..+...+..+.++|.||...|+
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~--~~gi~~~~g~~~~~~~~~~d~vv~spgi   77 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKM--FDGLVFYTGRLKDALDNGFDILALSPGI   77 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhc--cCCcEEEeCCCCHHHHhCCCEEEECCCC
Confidence            35679999997 58999999999999999999987544211 111110  1245555554444445689999998875

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.038  Score=50.05  Aligned_cols=57  Identities=18%  Similarity=0.212  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+|++|+|+|+++.+|+.++..|.++|+.|+++.+..                     +-..+.+.++|+||.+.|.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECCCC
Confidence            46899999999999999999999999999999886521                     1123456889999988764

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.49  E-value=0.019  Score=48.78  Aligned_cols=34  Identities=35%  Similarity=0.565  Sum_probs=27.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |+|.|.| .||+|..++-.|++.|++|++++.+++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~   34 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEE   34 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChH
Confidence            6899997 799999999999999999999998754

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR01408 Ube1 ubiquitin-activating enzyme E1

Probab=95.48  E-value=0.067  Score=56.85  Aligned_cols=104  Identities=12%  Similarity=0.096  Sum_probs=70.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc----------------------cccccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~~  170 (335)
                      ....+|||.|. |++|.++++.|+..|. +++++|.+.-...                      +.+.+.-+...++...
T Consensus        22 L~~s~VLIiG~-gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~  100 (1008)
T TIGR01408        22 MAKSNVLISGM-GGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSS  100 (1008)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEec
Confidence            34468999995 7799999999999998 7777776432111                      0111122334566666


Q ss_pred             ccccchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC--CeEEEEecccccC
Q 019794          171 HDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~r~v~iSS~~v~~  235 (335)
                      .++..+.+.+.|+||.+-                 .|......+-++|++.+  +.||+.++...||
T Consensus       101 ~~l~~e~l~~fdvVV~t~-----------------~~~~~~~~in~~cr~~~~~I~fI~~~~~G~~G  150 (1008)
T TIGR01408       101 VPFNEEFLDKFQCVVLTE-----------------MSLPLQKEINDFCHSQCPPIAFISADVRGLFG  150 (1008)
T ss_pred             ccCCHHHHcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCeEEEEEeecceEE
Confidence            677777888999999753                 22333345678899998  6788887766655

This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.44  E-value=0.12  Score=45.24  Aligned_cols=100  Identities=19%  Similarity=0.230  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc---cc---------------cccc--CCCceEEEeccc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD---NL---------------VHHF--RNPRFELIRHDV  173 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~---~~---------------~~~~--~~~~~~~~~~D~  173 (335)
                      +..+|+|.|. |++|++.++.|++.|. ++.+++-+.-...+   ..               .+..  -++.+++...+.
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            4458999995 8899999999999998 78877765321111   00               0000  123333333221


Q ss_pred             ------cch-hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          174 ------VEP-ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       174 ------~~~-~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                            .++ ...+.|+||.+.                 .|+..-..|+..|.+.+..  ++||+.+-
T Consensus       108 f~t~en~~~~~~~~~DyvIDai-----------------D~v~~Kv~Li~~c~~~ki~--vIss~Gag  156 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAI-----------------DSVRAKVALIAYCRRNKIP--VISSMGAG  156 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEch-----------------hhhHHHHHHHHHHHHcCCC--EEeecccc
Confidence                  111 334699999865                 4566666899999998764  44555443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.43  E-value=0.061  Score=49.02  Aligned_cols=37  Identities=22%  Similarity=0.295  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      .++|.|.|+ |.+|..|+..|+..|++|++.+++++..
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            358999996 9999999999999999999999987653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.40  E-value=0.021  Score=55.29  Aligned_cols=66  Identities=21%  Similarity=0.206  Sum_probs=45.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|.||+|.+|..++..|.+.|++|++++|+.....+.. ..   ..+.  ..+...+.+.++|+||-+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a-~~---~gv~--~~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA-KE---LGVE--YANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH-HH---cCCe--eccCHHHHhccCCEEEEec
Confidence            58999999999999999999999999999998643321111 11   1111  1122234567789998765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.36  E-value=0.027  Score=54.06  Aligned_cols=73  Identities=12%  Similarity=0.205  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+++|+|.|+ |.+|+.+++.|.+.|. ++++..|+.... ..+...+..  ...+..|.....+.++|+||++.+.
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~~~--~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAFRN--ASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHhcC--CeEecHHHHHHHhccCCEEEECcCC
Confidence            56789999996 9999999999999996 788888865322 223222211  2344444445667889999998764

>PRK10637 cysG siroheme synthase; Provisional

Probab=95.35  E-value=0.11  Score=50.69  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=57.6

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEc
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .|...+.++++|+|.|| |-++..=++.|++.|++|+++.....   +++.......++.++..+.....+.+++.||-+
T Consensus         4 ~P~~~~l~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~~~---~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~a   79 (457)
T PRK10637          4 LPIFCQLRDRDCLLVGG-GDVAERKARLLLDAGARLTVNALAFI---PQFTAWADAGMLTLVEGPFDESLLDTCWLAIAA   79 (457)
T ss_pred             eceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCEEEEEC
Confidence            46667789999999996 89999999999999999999864322   223333344678888888777788889887753

>PRK14851 hypothetical protein; Provisional

Probab=95.25  E-value=0.13  Score=52.43  Aligned_cols=102  Identities=11%  Similarity=0.033  Sum_probs=63.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.| .|++|+.+++.|++.|. +++++|.+.-...+.                      +.+.....+++.+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            34567999999 58999999999999998 777777652211110                      0111122345565


Q ss_pred             eccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          170 RHDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       170 ~~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      ...+..    +.+.++|+||.+.-         ++      .+..-..+.+.|.+.++.+|+.+.
T Consensus       119 ~~~i~~~n~~~~l~~~DvVid~~D---------~~------~~~~r~~l~~~c~~~~iP~i~~g~  168 (679)
T PRK14851        119 PAGINADNMDAFLDGVDVVLDGLD---------FF------QFEIRRTLFNMAREKGIPVITAGP  168 (679)
T ss_pred             ecCCChHHHHHHHhCCCEEEECCC---------CC------cHHHHHHHHHHHHHCCCCEEEeec
Confidence            555543    35678999997651         11      122223566788888877777553

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=95.23  E-value=0.13  Score=49.59  Aligned_cols=104  Identities=10%  Similarity=0.111  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc----------------------ccccccCCCceEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD----------------------NLVHHFRNPRFELIRH  171 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~  171 (335)
                      +..+|+|.|+ |.+|.++++.|+..|. .++++|.+.-...+                      .+.+.-+...++++..
T Consensus        19 ~~s~VlliG~-gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e   97 (425)
T cd01493          19 ESAHVCLLNA-TATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEE   97 (425)
T ss_pred             hhCeEEEEcC-cHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4558999986 5599999999999998 77887754211110                      0111112233455554


Q ss_pred             ccc------chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          172 DVV------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       172 D~~------~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      ++.      ...+.+.|+||.+-                 .+......+.+.|.+.++.+|+++|...||.
T Consensus        98 ~~~~ll~~~~~f~~~fdiVI~t~-----------------~~~~~~~~L~~~c~~~~iPlI~~~s~G~~G~  151 (425)
T cd01493          98 SPEALLDNDPSFFSQFTVVIATN-----------------LPESTLLRLADVLWSANIPLLYVRSYGLYGY  151 (425)
T ss_pred             ccchhhhhHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEecccCEEE
Confidence            432      23456788888532                 1112223466888888889999999887763

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.17  E-value=0.048  Score=57.29  Aligned_cols=158  Identities=18%  Similarity=0.211  Sum_probs=98.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc-ccc-cccc--CCCceEEEeccccch-----------hc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK-DNL-VHHF--RNPRFELIRHDVVEP-----------IL  178 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~-~~~-~~~~--~~~~~~~~~~D~~~~-----------~~  178 (335)
                      ..|..+|+||-|+-|.+|+.-|..+|. .++...|+.-..- +.+ .+..  ...++.+-..|++..           .+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence            457899999999999999999999999 4555555432111 111 0111  122344444455433           23


Q ss_pred             cCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~~---r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      .-+--|||+|+.--..-.++    +....-+..+.||.|+=+..++...   -||.+||.+.--                
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR---------------- 1910 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR---------------- 1910 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC----------------
Confidence            44778899887433322322    3445556677888888777777653   488888865421                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCce
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT  289 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v  289 (335)
                      .-.....||.+.-+.|+++.+- +..|++-+.+.-|.|
T Consensus      1911 GN~GQtNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1911 GNAGQTNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             CCCcccccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence            1122356999999999998773 445777777765544

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.12  E-value=0.087  Score=47.65  Aligned_cols=103  Identities=17%  Similarity=0.138  Sum_probs=65.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch----hccCCCEEEE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP----ILLEVDQIYH  186 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~----~~~~vD~Vih  186 (335)
                      ....+.+|+|+||+|-+|+....--.-+|++|+.+.-.+++.+- +.+.+ -+..+++-..|....    .=.++|+.|-
T Consensus       147 qpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~-l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         147 QPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDF-LTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHH-HHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence            33568899999999999987764444458999998765433221 22211 123344444444332    2256999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCC
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDP  237 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~  237 (335)
                      |.|-                      .+++++...   .+|++.+.-++.|..+
T Consensus       226 NVGg----------------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         226 NVGG----------------------EVLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             cCCc----------------------hHHHHHHHhhccccceeeeeehhhcCCC
Confidence            8873                      455554332   3499999999888654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.11  E-value=0.15  Score=39.29  Aligned_cols=64  Identities=27%  Similarity=0.421  Sum_probs=45.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      |+|.|. |-+|..+++.|.+.+.+|+++++++......     ....+.++.+|..++      .+.+++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-----~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL-----REEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-----HHTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-----HhcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            577785 7999999999999777999998864432211     123377899999876      346789888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14852 hypothetical protein; Provisional

Probab=95.06  E-value=0.14  Score=53.68  Aligned_cols=104  Identities=14%  Similarity=0.040  Sum_probs=65.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+..+|+|.| .|++|+.+++.|+..|. +++++|.+.-...+.                      +.+.-...+++.+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            45677999999 58999999999999998 777776653211110                      0111122345555


Q ss_pred             ecccc----chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          170 RHDVV----EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       170 ~~D~~----~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      ...+.    ++.+.++|+||.+.-         +.      .+..-..+.+.|.+.++.+|..++..
T Consensus       408 ~~~I~~en~~~fl~~~DiVVDa~D---------~~------~~~~rr~l~~~c~~~~IP~I~ag~~G  459 (989)
T PRK14852        408 PEGVAAETIDAFLKDVDLLVDGID---------FF------ALDIRRRLFNRALELGIPVITAGPLG  459 (989)
T ss_pred             ecCCCHHHHHHHhhCCCEEEECCC---------Cc------cHHHHHHHHHHHHHcCCCEEEeeccc
Confidence            54443    345678999997652         10      12223356677888888888876643

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.04  E-value=0.13  Score=50.50  Aligned_cols=72  Identities=21%  Similarity=0.180  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+++|+|.| .|..|.++++.|++.|++|.+.++......    .......+.+..++-..+.+.++|.||...|+
T Consensus        13 ~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~----~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi   84 (473)
T PRK00141         13 ELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARH----KLIEVTGVADISTAEASDQLDSFSLVVTSPGW   84 (473)
T ss_pred             ccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHH----HHHHhcCcEEEeCCCchhHhcCCCEEEeCCCC
Confidence            4567899999 688999999999999999999887533211    11112244454443223345678999998775

>PRK06153 hypothetical protein; Provisional

Probab=95.04  E-value=0.064  Score=50.48  Aligned_cols=101  Identities=14%  Similarity=0.096  Sum_probs=62.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc-----------ccc----------ccccC--CCceE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK-----------DNL----------VHHFR--NPRFE  167 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~-----------~~~----------~~~~~--~~~~~  167 (335)
                      ..+++++|+|.|. |++|+.++..|++.|. +++++|.+.-...           +.+          ...+.  ...+.
T Consensus       172 ~kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~I~  250 (393)
T PRK06153        172 AKLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRGIV  250 (393)
T ss_pred             HHHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCeEE
Confidence            3467789999995 8899999999999997 8888776521110           000          00000  11233


Q ss_pred             EEeccccc---hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          168 LIRHDVVE---PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       168 ~~~~D~~~---~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      .+...+..   ..+.++|+||-|.                 .|..+-..+.++|.+.+.-+|.++-
T Consensus       251 ~~~~~I~~~n~~~L~~~DiV~dcv-----------------Dn~~aR~~ln~~a~~~gIP~Id~G~  299 (393)
T PRK06153        251 PHPEYIDEDNVDELDGFTFVFVCV-----------------DKGSSRKLIVDYLEALGIPFIDVGM  299 (393)
T ss_pred             EEeecCCHHHHHHhcCCCEEEEcC-----------------CCHHHHHHHHHHHHHcCCCEEEeee
Confidence            33333322   1467899999877                 2444445667788888777776654

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.02  E-value=0.14  Score=49.11  Aligned_cols=35  Identities=37%  Similarity=0.482  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      |+|.|.| .|++|..++..|++.|++|++++++...
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~   35 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEK   35 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHH
Confidence            4788988 6999999999999999999999987653

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.02  E-value=0.11  Score=49.96  Aligned_cols=36  Identities=25%  Similarity=0.303  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      +|+|.|.| .|++|..++..|++.|++|+++++++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            46899998 6999999999999999999999987653

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.99  E-value=0.069  Score=48.71  Aligned_cols=57  Identities=19%  Similarity=0.187  Sum_probs=45.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ....||+|.|.|.+|.+|+.++..|+++|+.|++..+...                    + ..+....+|+||-+.|
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------~-l~e~~~~ADIVIsavg  211 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------D-AKALCRQADIVVAAVG  211 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------------C-HHHHHhcCCEEEEecC
Confidence            3568999999999999999999999999999999865321                    1 2234577899998876

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.99  E-value=0.036  Score=53.32  Aligned_cols=71  Identities=17%  Similarity=0.391  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|+...... +...+..   ..+..+...+.+.++|+||.+.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~-la~~~g~---~~i~~~~l~~~l~~aDvVi~aT~  249 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAED-LAKELGG---EAVKFEDLEEYLAEADIVISSTG  249 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHcCC---eEeeHHHHHHHHhhCCEEEECCC
Confidence            56789999996 999999999999999 689999886543221 2111111   23333334456678999999865

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.92  E-value=0.037  Score=51.13  Aligned_cols=71  Identities=17%  Similarity=0.331  Sum_probs=48.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++|+|.|+ |-+|..+++.|...| .+|++++|+.....+ +...+..   ..+..+...+.+.++|+||.+.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~-la~~~g~---~~~~~~~~~~~l~~aDvVi~at~  247 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE-LAKELGG---NAVPLDELLELLNEADVVISATG  247 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHcCC---eEEeHHHHHHHHhcCCEEEECCC
Confidence            46789999996 999999999998876 478888886543222 2222221   33333334455678999999875

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=94.89  E-value=0.3  Score=43.98  Aligned_cols=67  Identities=18%  Similarity=0.284  Sum_probs=39.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEE-EecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG--DEVIV-IDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +++|.|.| .|.||+.+++.|.+.+  .++.. .+++.+. .+.+...+   ...  ..+..++.+.++|+|+.++.
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~-a~~~a~~~---~~~--~~~~~~ell~~~DvVvi~a~   70 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEK-AENLASKT---GAK--ACLSIDELVEDVDLVVECAS   70 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHH-HHHHHHhc---CCe--eECCHHHHhcCCCEEEEcCC
Confidence            36899999 5999999999998864  56544 4443221 11111111   111  12223344578999999874

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.86  E-value=0.04  Score=53.14  Aligned_cols=71  Identities=21%  Similarity=0.318  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++|+|.|+ |.+|..++..|...|. +|++++|+...... +...+.   .+.+..+.....+.++|+||.+.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~-la~~~g---~~~~~~~~~~~~l~~aDvVI~aT~  251 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEE-LAEEFG---GEAIPLDELPEALAEADIVISSTG  251 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH-HHHHcC---CcEeeHHHHHHHhccCCEEEECCC
Confidence            56789999986 9999999999999997 78888886433221 222221   123333333445678999998875

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.85  E-value=0.11  Score=47.36  Aligned_cols=34  Identities=24%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++|.|.|+ |.+|..++..|++.|++|++++++.+
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~   37 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDE   37 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence            58999985 99999999999999999999998754

>PRK06444 prephenate dehydrogenase; Provisional

Probab=94.85  E-value=0.062  Score=46.12  Aligned_cols=28  Identities=29%  Similarity=0.369  Sum_probs=26.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVI  144 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~  144 (335)
                      |+|.|.||+|.+|+.+++.|.+.|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            5899999999999999999999999886

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.83  E-value=0.034  Score=52.05  Aligned_cols=77  Identities=18%  Similarity=0.119  Sum_probs=46.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh----ccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----LLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~vD~Vih~A  188 (335)
                      ..+++.|||.||+|.+|++.+.-+...|..+++..++.+.. +.....-....+++-+.|+.+..    ..++|+|+.|.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECC
Confidence            34678999999999999999977777784333333332211 11122212233445455554443    34699999998


Q ss_pred             CC
Q 019794          189 CP  190 (335)
Q Consensus       189 ~~  190 (335)
                      |.
T Consensus       234 g~  235 (347)
T KOG1198|consen  234 GG  235 (347)
T ss_pred             CC
Confidence            73

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=94.82  E-value=0.083  Score=49.57  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      |+|-|.| +||+|....--|++.||+|+|++.++.+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~K   35 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESK   35 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            6889998 7999999999999999999999988653

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=94.81  E-value=0.16  Score=47.55  Aligned_cols=97  Identities=12%  Similarity=0.163  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccc--cC-----------CCceEEEeccccchhccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHH--FR-----------NPRFELIRHDVVEPILLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~--~~-----------~~~~~~~~~D~~~~~~~~v  181 (335)
                      +.+|.|.|. |.||+.+++.+.+.. .+|+++..........+...  ..           .....+...+..++.+.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            358999998 999999999888763 47777664321100100000  00           0000122222234455789


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                      |+||-+.+..                  .+...+..+.+.|+++|+.++.
T Consensus        80 DVVIdaT~~~------------------~~~e~a~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         80 DIVVDATPGG------------------VGAKNKELYEKAGVKAIFQGGE  111 (341)
T ss_pred             CEEEECCCch------------------hhHHHHHHHHHCCCEEEEcCCC
Confidence            9999987531                  1234566777888777777663

>cd08293 PTGR2 Prostaglandin reductase

Probab=94.77  E-value=0.031  Score=51.99  Aligned_cols=35  Identities=29%  Similarity=0.115  Sum_probs=30.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+|+|+||+|.+|..++..+...|. +|++++++.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~  191 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE  191 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence            7999999999999999987778898 7999877543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=94.76  E-value=0.66  Score=41.78  Aligned_cols=69  Identities=13%  Similarity=0.098  Sum_probs=39.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |+||.|.|. |.||+.++++|.+. +.++..+....... ......... .+. +..|+. +...++|+|+-+++
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~-~~~~~~~~~-~~~-~~~d~~-~l~~~~DvVve~t~   70 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHSI-DAVRRALGE-AVR-VVSSVD-ALPQRPDLVVECAG   70 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCCH-HHHhhhhcc-CCe-eeCCHH-HhccCCCEEEECCC
Confidence            468999997 99999999999876 45665554322111 111111111 111 122322 22356999999885

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.75  E-value=0.11  Score=47.27  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=31.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      ++|.|.|+ |.+|..++..|++.|++|++++++++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            47999996 999999999999999999999987654

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.74  E-value=0.26  Score=44.87  Aligned_cols=31  Identities=39%  Similarity=0.495  Sum_probs=26.7

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNF  149 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~  149 (335)
                      +|+|.| .|++|.++++.|+..|. ++.++|.+
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D   32 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMD   32 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            588998 58999999999999998 77777765

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.73  E-value=0.045  Score=50.89  Aligned_cols=37  Identities=16%  Similarity=0.083  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+.+|+|+||+|.+|..++..+...|.+|++++++.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~  187 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE  187 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4679999999999999999888888999988877643

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=94.70  E-value=0.45  Score=43.03  Aligned_cols=68  Identities=16%  Similarity=0.255  Sum_probs=41.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEe-cCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVID-NFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +++|.|.| .|.||+.+++.|.+.  +.+|..+. ++++. .+.....+...    ...+..++.+.++|+|+-++.
T Consensus         6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~-a~~~a~~~g~~----~~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQR-HADFIWGLRRP----PPVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHH-HHHHHHhcCCC----cccCCHHHHhcCCCEEEECCC
Confidence            46899999 699999999999874  66776554 43222 11121111110    112333445677999998874

>PRK07574 formate dehydrogenase; Provisional

Probab=94.69  E-value=0.13  Score=48.94  Aligned_cols=68  Identities=12%  Similarity=0.134  Sum_probs=48.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+|+|.|.| .|-||+.+++.|...|.+|++.+|.....  .....   ..+  ...+-.++.+..+|+|+.+.
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~--~~~~~---~g~--~~~~~l~ell~~aDvV~l~l  256 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE--EVEQE---LGL--TYHVSFDSLVSVCDVVTIHC  256 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch--hhHhh---cCc--eecCCHHHHhhcCCEEEEcC
Confidence            46889999999 59999999999999999999998754211  11111   111  12234567788999998765

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=94.65  E-value=0.036  Score=50.99  Aligned_cols=71  Identities=23%  Similarity=0.181  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch---hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~vD~Vih~A~  189 (335)
                      .+.+++|+||+|.+|..+++.+...|.+|+++.++..... .+.. +..  -.++..+....   .+.++|+|++++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~-~~~--~~~~~~~~~~~~~~~~~~~d~v~~~~g  235 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK-ILKE-LGA--DYVIDGSKFSEDVKKLGGADVVIELVG  235 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHH-cCC--cEEEecHHHHHHHHhccCCCEEEECCC
Confidence            4568999999999999999999999999999887543221 1111 111  11222211111   1237999999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.64  E-value=0.091  Score=47.96  Aligned_cols=55  Identities=18%  Similarity=0.240  Sum_probs=45.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+||+|+|.|.++.+|..++..|+++|+.|++.. |..                     + .++....+|+||-+.+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~---------------------~-l~e~~~~ADIVIsavg  210 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR---------------------D-LPAVCRRADILVAAVG  210 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC---------------------C-HHHHHhcCCEEEEecC
Confidence            56899999999999999999999999999999884 321                     1 2445678899998776

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.63  E-value=0.066  Score=51.40  Aligned_cols=68  Identities=21%  Similarity=0.113  Sum_probs=48.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ...+++|+|+|. |.||+.++..|...|.+|+++++++.........     .+++.  + .++.+.++|+||.+.|
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-----G~~v~--~-l~eal~~aDVVI~aTG  276 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-----GFRVM--T-MEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-----CCEec--C-HHHHHhCCCEEEECCC
Confidence            357889999995 8999999999999999999998875433221111     22222  1 2455678999998764

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.63  E-value=0.097  Score=37.66  Aligned_cols=35  Identities=37%  Similarity=0.584  Sum_probs=30.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      +|+|.| +|++|-.++..|.+.|.+|+++.+.+.-.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            578888 49999999999999999999999876533

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PLN00203 glutamyl-tRNA reductase

Probab=94.62  E-value=0.058  Score=53.24  Aligned_cols=74  Identities=20%  Similarity=0.314  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++|+|.|+ |.+|..+++.|...|. +|+++.|+..... .+...+....+.+...+.....+.++|+||.+.+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~-~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~  338 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVA-ALREEFPDVEIIYKPLDEMLACAAEADVVFTSTS  338 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHH-HHHHHhCCCceEeecHhhHHHHHhcCCEEEEccC
Confidence            56789999997 9999999999999997 7999988754322 2222222222334444444556788999998764

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=94.61  E-value=0.11  Score=47.62  Aligned_cols=37  Identities=22%  Similarity=0.128  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+.+++|+|+++.+|..+++.+...|.+|++++++..
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~  202 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSED  202 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4579999999999999999999999999998887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=94.56  E-value=0.15  Score=44.57  Aligned_cols=167  Identities=14%  Similarity=0.115  Sum_probs=89.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC---CC--eE--EEEecCCCCC-ccccccccCCC----ceEEEeccccchhccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR---GD--EV--IVIDNFFTGR-KDNLVHHFRNP----RFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~---g~--~V--~~~~r~~~~~-~~~~~~~~~~~----~~~~~~~D~~~~~~~~vD~V  184 (335)
                      -+|+||||+|.||.+|+-.+.+-   |.  .+  ..++..+... -+...-++.+.    -.+++..+...+++.++|+.
T Consensus         5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afkdv~~a   84 (332)
T KOG1496|consen    5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFKDVDVA   84 (332)
T ss_pred             eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhccCcEE
Confidence            38999999999999999888652   22  22  2222211100 00000001111    11223333344578899999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecc-cccCCCCCCCCCCCcCCCCCCCCCCChHH
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~-~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      |-..+.  +...-..-...+..|+.-...--.+..+.   .++++.+.-- ...    .....+..    +.++..+.-+
T Consensus        85 ilvGa~--PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTN----ali~~k~A----psIP~kNfs~  154 (332)
T KOG1496|consen   85 ILVGAM--PRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTN----ALILKKFA----PSIPEKNFSA  154 (332)
T ss_pred             EEeccc--cCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccc----hhHHhhhC----CCCchhcchh
Confidence            987753  22212234456777776655444444443   3467766531 110    00111110    1222335566


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      .++.--.+..-+++.+.|+++.-+.--.|+|..
T Consensus       155 lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNH  187 (332)
T KOG1496|consen  155 LTRLDHNRALAQLALKLGVPVSDVKNVIIWGNH  187 (332)
T ss_pred             hhhhchhhHHHHHHHhhCCchhhcceeEEeccc
Confidence            677777777777777889888888888888854

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.54  E-value=0.093  Score=48.35  Aligned_cols=35  Identities=29%  Similarity=0.262  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      .+|+|.|.| +|.+|..++..|.+.|++|.+.+|+.
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            356899998 59999999999999999999998864

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.54  E-value=0.064  Score=49.02  Aligned_cols=65  Identities=14%  Similarity=0.252  Sum_probs=43.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +|+|.|.| .|.+|..++..|++.|++|++.+|+........ .    ...  ...+..++.+.++|+||-+.
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~----~g~--~~~~~~~e~~~~~d~vi~~v   66 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVI-A----AGA--ETASTAKAVAEQCDVIITML   66 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-H----CCC--eecCCHHHHHhcCCEEEEeC
Confidence            46899998 699999999999999999999887643321111 0    111  11223344567889998765

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.53  E-value=0.054  Score=49.14  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=46.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCc--eEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPR--FELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++++|.|| |+.+++++..|++.|. +|+++.|..+... .+.+.+....  +.....+..+. ....|+|||+-.
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~-~La~~~~~~~~~~~~~~~~~~~~-~~~~dliINaTp  199 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAE-ELADLFGELGAAVEAAALADLEG-LEEADLLINATP  199 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhccccccccccccccc-ccccCEEEECCC
Confidence            345789999996 8899999999999996 8999998755432 2222222111  11111111111 116899999764


Q ss_pred             C
Q 019794          190 P  190 (335)
Q Consensus       190 ~  190 (335)
                      .
T Consensus       200 ~  200 (283)
T COG0169         200 V  200 (283)
T ss_pred             C
Confidence            3

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=94.52  E-value=0.054  Score=53.06  Aligned_cols=70  Identities=14%  Similarity=0.222  Sum_probs=45.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++++|+|+ |.+|++++..|.+.|++|++.+|+..... .+.....   ...+..+.. ..+.++|+||++..
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~-~la~~~~---~~~~~~~~~-~~l~~~DiVInatP  399 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAE-ALASRCQ---GKAFPLESL-PELHRIDIIINCLP  399 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc---cceechhHh-cccCCCCEEEEcCC
Confidence            46789999995 89999999999999999998887643222 1111111   111111111 12467999999864

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.51  E-value=0.044  Score=49.83  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC----CCceEEEeccccchhccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR----NPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .++++++|.|+ |+.|++++-.|++.|. +|+++.|+.++.. .+...+.    ...+.....+..+..+.++|+|||+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~-~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-HHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            45689999996 8999999999999997 7888888654322 2222111    11122211111123456799999875


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      .
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            4

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=94.50  E-value=0.67  Score=36.08  Aligned_cols=84  Identities=19%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGA---GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGat---G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      |+|.|.|++   +..|..+++.|.+.|++|+.+.-..    ....      .. -.-.++.+ .-..+|.++-+.     
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~----~~i~------G~-~~y~sl~e-~p~~iDlavv~~-----   63 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG----GEIL------GI-KCYPSLAE-IPEPIDLAVVCV-----   63 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTC----SEET------TE-E-BSSGGG-CSST-SEEEE-S-----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCc----eEEC------cE-EeeccccC-CCCCCCEEEEEc-----
Confidence            579999988   6789999999999999999984321    1110      00 11122332 236789888754     


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCe-EEEEec
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTST  230 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-~v~iSS  230 (335)
                                   +-..+..+++.|.+.|++ +++.++
T Consensus        64 -------------~~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   64 -------------PPDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             --------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             -------------CHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                         233455788888888884 555554

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.48  E-value=0.16  Score=41.05  Aligned_cols=58  Identities=19%  Similarity=0.197  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.+||+|+|.|.+.-+|..++..|.++|..|.+..+...                    | .++...++|+||-..|.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~--------------------~-l~~~v~~ADIVvsAtg~   81 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------------Q-LQSKVHDADVVVVGSPK   81 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------------C-HHHHHhhCCEEEEecCC
Confidence            3578899999999999999999999999999998864211                    1 22356788999987763

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.45  E-value=0.038  Score=52.30  Aligned_cols=72  Identities=18%  Similarity=0.239  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEE--EeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFEL--IRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .+.+|+|+|+ |-+|...++.|.+.|.+|++++++..... .+...+.. .+..  ...+...+.+.++|+||++++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~-~l~~~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLR-QLDAEFGG-RIHTRYSNAYEIEDAVKRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-HHHHhcCc-eeEeccCCHHHHHHHHccCCEEEEccc
Confidence            4567999986 89999999999999999999988643221 11111111 1111  111223445678999999874

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.45  E-value=0.23  Score=36.34  Aligned_cols=35  Identities=31%  Similarity=0.523  Sum_probs=29.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEec
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDN  148 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r  148 (335)
                      ...+++++|.|. |.+|+.++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            356789999998 99999999999998 457777755

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=94.43  E-value=0.41  Score=42.63  Aligned_cols=65  Identities=17%  Similarity=0.114  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc-cch----hc--cCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-VEP----IL--LEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~----~~--~~vD~Vih~A  188 (335)
                      +++|+|.|||+ =|+.|++.|.+.|+.|++..-.....       .......+..+-+ ..+    .+  .+++.||...
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~-------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDAT   73 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG-------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDAT   73 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC-------cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECC
Confidence            56899999876 59999999999999888766543322       1123445555555 222    22  4699999866

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.42  E-value=0.066  Score=50.95  Aligned_cols=72  Identities=15%  Similarity=0.303  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ++++++||.|| |=+|.-+++.|.+.|. +|++..|...... .+...+   ..+++..+-....+.++|+||.+.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~-~La~~~---~~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAE-ELAKKL---GAEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHH-HHHHHh---CCeeecHHHHHHhhhhCCEEEEecCC
Confidence            67889999995 9999999999999995 7888877543322 222222   26677777777788999999988664

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.31  E-value=0.17  Score=46.58  Aligned_cols=36  Identities=22%  Similarity=0.395  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      .++|.|.|+ |.+|..++..|++.|++|++++++.+.
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            358999985 999999999999999999999986543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=94.25  E-value=0.067  Score=49.44  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ||+|.|.|+ |.+|..++..|++.|++|.+++|++.
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~   35 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPE   35 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            468999995 99999999999999999999998643

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.20  E-value=0.097  Score=47.77  Aligned_cols=76  Identities=9%  Similarity=0.021  Sum_probs=47.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC--CCccccccccCC---CceEEEeccc---cchhccCCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT--GRKDNLVHHFRN---PRFELIRHDV---VEPILLEVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~--~~~~~~~~~~~~---~~~~~~~~D~---~~~~~~~vD~  183 (335)
                      ..++++++|.|+ |+.+++++-.|...|. +|+++.|+.+  .+.+.+.+.+..   ..+.+...+.   ....+.++|+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence            346789999996 6669999999999997 8999999753  122222222211   1122222211   1124567899


Q ss_pred             EEEccC
Q 019794          184 IYHLAC  189 (335)
Q Consensus       184 Vih~A~  189 (335)
                      |||+..
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999653

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.18  E-value=0.067  Score=44.15  Aligned_cols=70  Identities=23%  Similarity=0.229  Sum_probs=45.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ....+|+++|.| =|.+|+.+++.|...|.+|++.+.++-..-+...+     .+++..   .++++...|++|.+.|.
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-----Gf~v~~---~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-----GFEVMT---LEEALRDADIFVTATGN   88 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-----T-EEE----HHHHTTT-SEEEE-SSS
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-----CcEecC---HHHHHhhCCEEEECCCC
Confidence            456788999999 69999999999999999999998875433333322     333332   45577889999987763

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02928 oxidoreductase family protein

Probab=94.14  E-value=0.13  Score=48.28  Aligned_cols=75  Identities=16%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCC---c-e-EEEeccccchhccCCCEEEE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP---R-F-ELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~---~-~-~~~~~D~~~~~~~~vD~Vih  186 (335)
                      ....+|++.|.| .|-||+.+++.|...|.+|++.+|........... +...   . + .....+-.++.+..+|+|+.
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl  232 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLL-IPNGDVDDLVDEKGGHEDIYEFAGEADIVVL  232 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhc-cccccccccccccCcccCHHHHHhhCCEEEE
Confidence            457899999999 59999999999999999999998753211110000 0000   0 0 01133445678889999987


Q ss_pred             cc
Q 019794          187 LA  188 (335)
Q Consensus       187 ~A  188 (335)
                      +.
T Consensus       233 ~l  234 (347)
T PLN02928        233 CC  234 (347)
T ss_pred             CC
Confidence            65

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.05  E-value=0.054  Score=50.78  Aligned_cols=36  Identities=17%  Similarity=0.072  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      .+.+|+|+||+|.||...+..+...|.+|++++++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            467999999999999999988878899998887654

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=93.98  E-value=0.17  Score=41.85  Aligned_cols=57  Identities=19%  Similarity=0.268  Sum_probs=40.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+||+|+|.|.+..+|+-++..|.++|+.|.+.....    .                 -..+.....|+||-.+|.
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----~-----------------~l~~~~~~ADIVVsa~G~   89 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----K-----------------NLQEITRRADIVVSAVGK   89 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----S-----------------SHHHHHTTSSEEEE-SSS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----C-----------------cccceeeeccEEeeeecc
Confidence            47899999999999999999999999999998875421    1                 112345678889887763

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	335
4ef7_B	337	Udp-Xylose Synthase Length = 337		2e-87
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		7e-85
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-22
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		5e-18
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		3e-17
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		4e-17
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		8e-17
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		3e-16
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		1e-13
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-13
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-13
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-13
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		4e-13
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		8e-13
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		3e-12
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		4e-12
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		4e-12
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		6e-12
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		7e-12
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		2e-11
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-11
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		2e-11
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		2e-11
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		4e-11
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		9e-11
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-10
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		1e-10
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		1e-10
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-10
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		2e-10
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		2e-10
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		2e-10
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		3e-10
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		3e-10
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		4e-10
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		5e-10
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-09
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		4e-09
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		4e-09
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		4e-09
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-09
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		7e-09
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		7e-09
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		9e-09
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		9e-09
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-08
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-08
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		2e-08
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		3e-08
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		4e-07
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		5e-07
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		2e-06
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		2e-06
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		4e-06

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score =  310 bits (794), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 146/211 (69%), Positives = 169/211 (80%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
           AGFVGSHL DKL   G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+ +EVDQI
Sbjct: 36  AGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 95
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
           YHLA PASP +Y YNP+KT+KTN +GTLN LGLAKRVGA+ LL STSEVYGDP  HPQ E
Sbjct: 96  YHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRVGARLLLASTSEVYGDPEVHPQSE 155
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
            YWG+VNPIG R+CYDEGKR AET    Y +  GVEVR+ARIFNT+GPR   +DGRVVSN
Sbjct: 156 DYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEGVEVRVARIFNTFGPRXHXNDGRVVSN 215
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 216 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 246

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 111/219 (50%), Gaps = 24/219 (10%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---LEV 181
           AGF+GSHLVDKL++ G EV+V+DN  +GR++     F NP  EL   D+ +      ++ 
Sbjct: 9   AGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-----FVNPSAELHVRDLKDYSWGAGIKG 63
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDP--L 238
           D ++H A           P+     NV+ T N+L  A++ G +  +  S+S VYGD   +
Sbjct: 64  DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVI 123
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
             P++E Y     PI   S Y   K   E +   Y R  GV     R  N  GPR  L  
Sbjct: 124 PTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPR--LRH 174
Query: 299 GRVVSNFVAQAIRRQP--MTVYGDGKQTRSFQYVSDLVH 335
           G V+ +F+ + +RR P  + V GDG Q +S+ YV D V 
Sbjct: 175 G-VIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVE 211

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 22/216 (10%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
           AGF+GSHLVDKL++ G EV+V+D        +   H R+ +      D      ++ D +
Sbjct: 9   AGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSAELHVRDLK------DYSWGAGIKGDVV 62
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDP--LEHP 241
           +H A           P+     NV+ T N+L  A++ G +  +  S+S VYGD   +  P
Sbjct: 63  FHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTP 122
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRV 301
           ++E Y     PI   S Y   K   E +   Y R  GV     R  N  GPR  L  G V
Sbjct: 123 EEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPR--LRHG-V 172
Query: 302 VSNFVAQAIRRQP--MTVYGDGKQTRSFQYVSDLVH 335
           + +F+ + +RR P  + V GDG Q +S+ YV D V 
Sbjct: 173 IYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVE 207

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV----VEPILLE 180
           AGF+GSH+VDKL    +E++VIDN  +G ++     F N    L++ D+    ++  L  
Sbjct: 10  AGFIGSHVVDKL-SESNEIVVIDNLSSGNEE-----FVNEAARLVKADLAADDIKDYLKG 63
Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVYGDPLE 239
            ++++H+A          NP +  + NV+ T  +L   ++ G ++ + TSTS VYG+   
Sbjct: 64  AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKV 123
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
            P  E Y     P    S Y   K   E L   Y     ++  I R  N  G R      
Sbjct: 124 IPTPEDY-----PTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG-- 176
Query: 300 RVVSNFVAQAIRRQP--MTVYGDGKQTRSFQYVSDLV 334
            V+ +F+ + ++R P  + + G+G+Q +S+ Y+SD V
Sbjct: 177 -VIYDFIMK-LKRNPEELEILGNGEQNKSYIYISDCV 211

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 125 AGFVGSHLVDKLIDRG------DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           AGF+GSH V +L+         DEVIV+D+  + G + NL     +PR   +  D+ +  
Sbjct: 9   AGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAG 68
Query: 178 LLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTS 231
           LL      VD I H A  +             +TNV GT  +L  A   G  + +  ST 
Sbjct: 69  LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTD 128
Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           EVYG           W   +P+   S Y   K  ++ +   YHR  G++VRI R  N YG
Sbjct: 129 EVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYG 183
Query: 292 PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           P    +  +++  FV   +    + +YGDG   R + +  D
Sbjct: 184 PYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 125 AGFVGSHLVDKLIDRG------DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           AGF+GSH V +L+         DEVIV+D+  + G + NL     +PR   +  D+ +  
Sbjct: 9   AGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAG 68
Query: 178 LLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTS 231
           LL      VD I H A  +             +TNV GT  +L  A   G  + +  ST+
Sbjct: 69  LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN 128
Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           +VYG           W   +P+   S Y   K  ++ +   YHR  G++VRI R  N YG
Sbjct: 129 QVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYG 183
Query: 292 PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           P    +  +++  FV   +    + +YGDG   R + +  D
Sbjct: 184 PYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGR---KDNLVHHFRNPRFELIRHDVVEPILLEV 181
           AGF+G HL   L+  G+EV V+D+         +        P  EL   D     L +V
Sbjct: 16  AGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERD-----LSDV 70
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH 240
             +YHLA   S       P+  +  NV    ++L L   VG  K ++ ST EVYG     
Sbjct: 71  RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTL 129
Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPRMCLDDG 299
           P  E      +P+  RS Y   K   E +   + R +   EV I R FN YGP    D  
Sbjct: 130 PTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-- 182
Query: 300 RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            +V    A  + R  + V GDG+Q R F Y++D+V
Sbjct: 183 ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVV 217

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHHFRNPRFELIRHDV----- 173
           AGF+GS+L++KL+     VI +DNF TG + N      LV   +  RF  I  D+     
Sbjct: 47  AGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 106
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
            E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F   ++S 
Sbjct: 107 CEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 166
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R FN +G 
Sbjct: 167 TYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGR 221
Query: 293 RMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R   +     V+  + A  ++   + + GDG+ +R F Y+ +++ 
Sbjct: 222 RQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 266

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHHFRNPRFELIRHDV----- 173
           AGF+GS+L++KL+     VI +DNF TG + N      LV   +  RF  I  D+     
Sbjct: 34  AGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 93
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
            E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F   ++S 
Sbjct: 94  CEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 153
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R FN +G 
Sbjct: 154 TYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGR 208
Query: 293 RMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R   +     V+  + A  ++   + + GDG+ +R F Y+ +++ 
Sbjct: 209 RQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHHFRNPRFELIRHDV----- 173
           AGF+GS+L++KL+     VI +DNF TG + N      LV   +  RF  I  D+     
Sbjct: 28  AGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 87
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
            E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F   ++S 
Sbjct: 88  CEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 147
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R FN +G 
Sbjct: 148 TYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGR 202
Query: 293 RMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R   +     V+  + A  ++   + + GDG+ +R F Y+ +++ 
Sbjct: 203 RQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 247

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHHFRNPRFELIRHDV----- 173
           AGF+GS+L++KL+     VI +DNF TG + N      LV   +  RF  I  D+     
Sbjct: 34  AGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 93
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
            E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F   ++S 
Sbjct: 94  CEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 153
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R FN +G 
Sbjct: 154 TYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGR 208
Query: 293 RMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R   +     V+  + A  ++   + + GDG+ +R F Y+ +++ 
Sbjct: 209 RQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 125 AGFVGSHLVDKLIDR-GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL--- 179
           AGF+GS LV  +I+   D V+V+D   + G   +L    ++ RF   + D+ +   L   
Sbjct: 10  AGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV 69
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKF 225
               + D + HLA  +        P   I+TN++GT  +L  A          K+   +F
Sbjct: 70  FTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRF 129
Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
              ST EVYGD       + ++    P    S Y   K +++ L   + R  G+   I  
Sbjct: 130 HHISTDEVYGDL---HSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITN 186
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
             N YGP    +  +++   +  A+  + + VYG+G+Q R + YV D
Sbjct: 187 CSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 126 GFVGSHLVDKLIDR--GDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDV-----VEPI 177
           GF+GS+ +  ++++    EVI ID    G    NL     +PR+  ++ DV     V+ +
Sbjct: 13  GFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL 72
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYG 235
           + +VD + HLA  +       +P   + +NV+GT  +L   +R     +F+  ST EVYG
Sbjct: 73  VRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132
Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
           D L+    E      + +   S Y   K  ++ L + + R   +   I R  N YGP   
Sbjct: 133 DILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQF 187
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            +  +++   + +A     + +YG GK  R + YV D V
Sbjct: 188 PE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHV 224

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHHFRNPRFELIRHDV----- 173
           AGF+GS+L++ L+    +V+ +DNF TG + N      LV   +   F+ I+ D+     
Sbjct: 36  AGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDD 95
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
                  VD + H A   S      +P+ +  TN+ G LNML  A+    + F   ++S 
Sbjct: 96  CNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS 155
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YGD    P+ E   G   P+   S Y   K   E     + R  G      R FN +G 
Sbjct: 156 TYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGR 210
Query: 293 RMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R   +     V+  + +  I+   + + GDG+ +R F Y+ + V 
Sbjct: 211 RQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 255

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 125 AGFVGSHLVDKLIDRGDEV--IVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE- 180
           AGF+GS+ V  + +   +V   V+D   + G K NL       R EL+  D+ +  L++ 
Sbjct: 13  AGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDK 71
Query: 181 ----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236
                D I H A  +   +   +P   I TN +GT  +L  A++   +F   ST EVYGD
Sbjct: 72  LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGD 131
Query: 237 -PL--------EHP-QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
            PL        E P +K T   N NP    S Y   K  ++ +   + R  GV+  I+  
Sbjct: 132 LPLREDLPGHGEGPGEKFTAETNYNP---SSPYSSTKAASDLIVKAWVRSFGVKATISNC 188
Query: 287 FNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
            N YGP   ++    R ++N +A  I+ +   +YG+GK  R + + +D
Sbjct: 189 SNNYGPYQHIEKFIPRQITNILA-GIKPK---LYGEGKNVRDWIHTND 232

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHFRNPRFELI------RHDVVEPI 177
            GF+GS+L    + +G ++IV DN    G  DNL        FE +      ++DV   I
Sbjct: 10  CGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLI 69
Query: 178 LLEV-DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVY 234
              + D  +HLA   +      NP    + NV GTLN+L   ++  +    + +ST++VY
Sbjct: 70  TKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVY 129
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDE------------GKRTAETLTMDYHRGAGVEVR 282
           GD  ++   ET       + + + YDE             K  A+   +DY R  G+   
Sbjct: 130 GDLEQYKYNETE-TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTV 188
Query: 283 IARIFNTYGPR-MCLDDGRVVSNFVAQAIR-----RQPMTVYGDGKQTRSFQYVSDLV 334
           + R  + YG R     D   V  F  +A+       +P T+ G+GKQ R   +  D++
Sbjct: 189 VFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMI 246

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEV--D 182
           AGF+GSH+V+ L+ RG EV V+DN  TG+++N+       R +L   + VE    E    
Sbjct: 9   AGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPT 68
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST-SEVYGDPLEH 240
            + H A  AS      +PV   + N++G LN+L   ++ G  K +  ST   +YG+  E 
Sbjct: 69  HVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEG 128
Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM-CLDDG 299
            + E  W    P   +S Y   K   E     Y +  G++    R  N YGPR     + 
Sbjct: 129 ERAEETW----PPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEA 184
Query: 300 RVVSNFVAQAIRRQPMTVY-----GDGKQTRSFQYVSDLVH 335
            VV+ F  + ++  P+T+Y     GD    R + YV D+  
Sbjct: 185 GVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 32/227 (14%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VEPILL 179
           AGFVG +L + L ++  EV     F T R     +  + P  E+I  D+     V+ ++ 
Sbjct: 21  AGFVGKYLANHLTEQNVEV-----FGTSRN----NEAKLPNVEMISLDIMDSQRVKKVIS 71
Query: 180 EV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK--RVGAKFLLTSTSEVYG 235
           ++  D I+HLA  +S      N   T  TNV GTL++L   +   +  + L   +SE YG
Sbjct: 72  DIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 131
Query: 236 D--PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
              P E P  E      N +   S Y   K +   L   Y +  G+++   R FN  GP 
Sbjct: 132 MILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPG 186
Query: 294 MCLDDGRVVSNFVAQAI-----RRQPMTVYGDGKQTRSFQYVSDLVH 335
             L  G V  +F  Q +     +++P+   G+ +  R F  V D+V 
Sbjct: 187 QSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQ 231

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF----FTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
           AGF+GS+ V   + +  E   I NF    ++G  +N+     +P +  ++ ++    LLE
Sbjct: 33  AGFIGSNFVHYXL-QSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLE 91
Query: 181 -------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GAKFLLTSTSE 232
                  V  I + A  +       NP+    TNV+GT+ +L L K+    K +  ST E
Sbjct: 92  HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE 151
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
           VYG       K   +    P+   S Y   K +A+ + + Y++   + V + R  N YGP
Sbjct: 152 VYGSL----GKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQLPVIVTRCSNNYGP 207
Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
               +  +++   V  A+  + + +YGDG   R + +V+D
Sbjct: 208 YQYPE--KLIPLXVTNALEGKKLPLYGDGLNVRDWLHVTD 245

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL--- 179
           AGF+GS +V  +I +  D V+ ID   + G  ++L     + R+     D+ +   +   
Sbjct: 9   AGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----------KF 225
               + D + HLA  +        P   I+TN++GT  +L +A++  +          +F
Sbjct: 69  FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRF 128
Query: 226 LLTSTSEVYGDPLEHPQKET------YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV 279
              ST EVYGD L HP +         +         S Y   K +++ L   + R  G+
Sbjct: 129 HHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGL 187
Query: 280 EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
              +    N YGP    +  +++   +  A+  +P+ +YG G Q R + YV D
Sbjct: 188 PTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE---LIRHDVVEPILLEVD 182
           GF+G HL  ++++  D  +   +  T R  +LV H R   FE    I  + VE  + + D
Sbjct: 34  GFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCD 93
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG----DPL 238
            I  L   A+P  Y   P++  + +    L ++  A + G   +  STSEVYG    +  
Sbjct: 94  VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQF 153
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD- 297
           +       +G +N    R  Y   K+  + +   Y    G+   + R FN  GP   LD 
Sbjct: 154 DPDASALTYGPINK--PRWIYACSKQLMDRVIWGYGM-EGLNFTLFRPFNWIGP--GLDS 208
Query: 298 -------DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                    RVV+ F+   +R + +++   G Q R+F YV D
Sbjct: 209 IYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDD 250

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 19/224 (8%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL---EV 181
            GF+ SH+  +L   G  VI  D     + +++        F L+   V+E  L     V
Sbjct: 38  GGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 94
Query: 182 DQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD--P 237
           D +++LA     + + + N    +  N M + NM+  A+  G K F   S++ +Y +   
Sbjct: 95  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 154
Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
           LE         +  P   +  Y   K   E L   Y++  G+E RI R  N YGP     
Sbjct: 155 LETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 214
Query: 298 DGRVVSNFVAQAIRRQPMT------VYGDGKQTRSFQYVSDLVH 335
            GR  +     A  R+  T      ++GDG QTRSF ++ + V 
Sbjct: 215 GGREAA---PAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 255

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL---EV 181
            GF+ SH+  +L   G  VI  D     + +++        F L+   V+E  L     V
Sbjct: 38  GGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 94
Query: 182 DQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD--P 237
           D +++LA     + + + N    +  N M + NM+  A+  G K F   S++ +Y +   
Sbjct: 95  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 154
Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
           LE         +  P   +  Y   K   E L   Y++  G+E RI R  N YGP     
Sbjct: 155 LETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 214
Query: 298 DGR--VVSNFVAQA-IRRQPMTVYGDGKQTRSFQYVSDLVH 335
            GR    + F  +A        ++GDG QTRSF ++ + V 
Sbjct: 215 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 255

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL---EV 181
            GF+ SH+  +L   G  VI  D     + +++        F L+   V+E  L     V
Sbjct: 38  GGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 94
Query: 182 DQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD--P 237
           D +++LA     + + + N    +  N M + NM+  A+  G K F   S++ +Y +   
Sbjct: 95  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 154
Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
           LE         +  P   +  Y   +   E L   Y++  G+E RI R  N YGP     
Sbjct: 155 LETTNVSLKESDAWPAEPQDAYGLERLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 214
Query: 298 DGR--VVSNFVAQA-IRRQPMTVYGDGKQTRSFQYVSDLVH 335
            GR    + F  +A        ++GDG QTRSF ++ + V 
Sbjct: 215 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 255

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL---EV 181
            GF+ SH+  +L   G  VI  D     + +++        F L+   V+E  L     V
Sbjct: 38  GGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 94
Query: 182 DQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD--P 237
           D +++LA     + + + N    +  N M + NM+  A+  G K F   S++ +Y +   
Sbjct: 95  DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQ 154
Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
           LE         +  P   +  +   K   E L   Y++  G+E RI R  N YGP     
Sbjct: 155 LETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK 214
Query: 298 DGR--VVSNFVAQA-IRRQPMTVYGDGKQTRSFQYVSDLVH 335
            GR    + F  +A        ++GDG QTRSF ++ + V 
Sbjct: 215 GGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 255

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 23  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 77
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 78  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 137
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 138 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 197
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 198 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 240

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 23  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 77
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 78  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 137
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 138 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 197
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 198 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 240

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 23  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 77
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 78  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 137
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 138 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 197
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 198 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 240

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 23  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 77
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 78  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 137
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 138 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 197
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 198 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 240

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 10  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 64
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 65  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 124
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 125 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 184
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 185 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D       D +     +P F  +  D+      +E  
Sbjct: 325 GFIGNHLTERLL-REDHYEVYGLDI----GSDAISRFLNHPHFHFVEGDISIHSEWIEYH 379
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  STSEVYG  
Sbjct: 380 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 439
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 440 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 500 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
           GF+G+HL ++L+ R D  EV  +D    G  D +     +P F  +  D+      +E  
Sbjct: 23  GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 77
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
           + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  ST+EVYG  
Sbjct: 78  VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTAEVYGMC 137
Query: 238 LEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
            +    E +    V P+ + R  Y   K+  + +   Y    G++  + R FN  GPR+ 
Sbjct: 138 SDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 197
Query: 296 ------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                 +   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 198 NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 240

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 24/228 (10%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE--VD 182
           AG++GSH V KL+D G  V+V+DN  TG +D +    +    +L     +  +  +  ++
Sbjct: 10  AGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIE 69
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD-PLEH 240
            + H A  +        P++    NV G L +L +       KF+ +ST+  YG+  ++ 
Sbjct: 70  AVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDL 129
Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR---MCLD 297
             +ET     NP    + Y E K   E +   Y + + +  +I R FN  G     +  +
Sbjct: 130 ITEETM---TNPT---NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGE 183
Query: 298 DGRVVSNFVAQAI-----RRQPMTVYG------DGKQTRSFQYVSDLV 334
           D R  ++ +   +     +R+ + ++G      DG   R + +V DLV
Sbjct: 184 DHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 129 GSHLVDKLIDRGDEVIVI----DNFFTGRKDNLVH--HFRNPRFELIRHDVVEP-----I 177
           GS+L + L+++G EV  I     +F T R D++    H  NP+F L   D+ +      I
Sbjct: 14  GSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRI 73
Query: 178 LLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML------GLAKRVGAKFLLTS 229
           L EV  D++Y+L   +       +P  T   + MGTL +L      GL K+   +F   S
Sbjct: 74  LREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT--RFYQAS 131
Query: 230 TSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           TSE+YG   E PQKET      P   RS Y   K  A  +T++Y    G+      +FN 
Sbjct: 132 TSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNH 186
Query: 290 YGPR 293
             PR
Sbjct: 187 ESPR 190

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV-------HHFRNPRFELIRHDVVEPI 177
           AG++GSH V +LI+ G + +V DN      D++        HH      +L     +E +
Sbjct: 20  AGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKV 79
Query: 178 LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVY 234
             E  +D + H A   +       P++    N++GT+ +L L ++   +KF+ +S++ VY
Sbjct: 80  FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVY 139
Query: 235 GDPLEHPQ-----KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA--RIF 287
           GD    P      +E   G  NP G        K   E +  D +       + A  R F
Sbjct: 140 GDATRFPNMIPIPEECPLGPTNPYGHT------KYAIENILNDLYNSDKKSWKFAILRYF 193
Query: 288 NTYGPR---MCLDDGRVVSN----FVAQAI--RRQPMTVYGDGKQTRSFQYVSDLVH 335
           N  G     +  +D   + N    ++AQ    RR+ + ++GD   +R    + D +H
Sbjct: 194 NPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 250

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +ST+ VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSTATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 23/231 (9%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL---- 179
           AGFVGS+LV +L++ G ++V V+DN  +  K N+  H   P        + +  LL    
Sbjct: 41  AGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDH---PAVRFSETSITDDALLASLQ 97
Query: 180 -EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNM---LGLAKRVGAKFLLTSTSEVYG 235
            E D ++HLA         ++P+   + N + TL +   L   KR+       +   +  
Sbjct: 98  DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAE 157
Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              +  +       V+     S Y   K   E  ++ YH+   +    AR  N YGP   
Sbjct: 158 KTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEI 217
Query: 296 LDDGR-----------VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           L  GR           V   F+ +A++  P+ +   G  TR F +V D+ +
Sbjct: 218 LGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVAN 268

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 125 AGFVGSHLVDKLIDR--GDEVIVIDNF-----FTGRKDNLVHHFRNP---RFELIRHDVV 174
           AGFVGS+L     +     +V+V+D F     F+  + + + HF+N    + E+I  D+ 
Sbjct: 19  AGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN 78
Query: 175 EPI------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT 228
            P+       L  D ++H A  +       N    +KTN    LN+L +A+   AK +  
Sbjct: 79  NPLDLRRLEKLHFDYLFHQAAVSDTT--MLNQELVMKTNYQAFLNLLEIARSKKAKVIYA 136
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           S++ VYG+            N +P    + Y   K   +   +  H    V+V + R FN
Sbjct: 137 SSAGVYGNT---KAPNVVGKNESP---ENVYGFSKLCMDEFVLS-HSNDNVQVGL-RYFN 188
Query: 289 TYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
            YGPR    +    +V      A+  + + ++  G+Q R F Y+ D++ 
Sbjct: 189 VYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQ 237

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 25/179 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL------ 178
            G +GSH+ + L++RGD+V+ IDNF TGR+++L  H   P    +   + +  L      
Sbjct: 30  CGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PNLTFVEGSIADHALVNQLIG 86
Query: 179 -LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR--VGAKFLLTSTSEVYG 235
            L+ D + H A         YN      TN +G  N++  AK+  VG +F+   T+  YG
Sbjct: 87  DLQPDAVVHTAASYKDPDDWYN---DTLTNCVGGSNVVQAAKKNNVG-RFVYFQTALCYG 142
Query: 236 -DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
             P++ P +  +         R+  +     +++   DY   +G++    R+ N  GPR
Sbjct: 143 VKPIQQPVRLDH--------PRNPANSSYAISKSANEDYLEYSGLDFVTFRLANVVGPR 193

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S++ VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S++ VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S++ VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S + VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S + VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S + VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSVATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S Y + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S++ VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S + + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S + VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S + + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL--- 179
           +G++GSH   +L+  G +VI++DN    ++  L  +          +  D+    L+   
Sbjct: 9   SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
                +D + H A   +       P++    NV GTL ++   +    K F+ +S + VY
Sbjct: 69  LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP 292
           GD  + P  E++     P G  +S + + K   E +  D  +      + + R FN  G 
Sbjct: 129 GDNPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQAI--RRQPMTVYG------DGKQTRSFQYVSDLV 334
               D G     + +N   ++AQ    RR  + ++G      DG   R + +V DL 
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 38/212 (17%)
Query: 129 GSHLVDKLIDRGDEVIVI----DNFFTGRKDNLVHHFRNPRF-----------ELIRHDV 173
           GS+L + L+++G EV  I     +F TGR   + H ++NP+            +L     
Sbjct: 37  GSYLAEFLLEKGYEVHGIVRRSSSFNTGR---IEHLYKNPQAHIEGNMKLHYGDLTDSTC 93
Query: 174 VEPILLEVD--QIYHLACPASPVHYKYNPVK-TIKTNVMGTLNMLGLAKRVG----AKFL 226
           +  I+ EV   +IY+L    S V   ++  + T   + +GTL +L   K  G     KF 
Sbjct: 94  LVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFY 152
Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
             STSE+YG   E PQKET      P   RS Y   K  A  + +++     +      +
Sbjct: 153 QASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL 207
Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVY 318
           FN   PR         +NFV + I R    +Y
Sbjct: 208 FNHESPRRG-------ANFVTRKISRSVAKIY 232

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE--VD 182
           AG +GS+L++  + +G E++VIDNF TG+++ L          +I   V +  LLE   D
Sbjct: 29  AGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---PVAGLSVIEGSVTDAGLLERAFD 85
Query: 183 QI--YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT-STSEVYGDPLE 239
                H+   A+      +  +   TNV G++N+   A + G K LL   T+  YG P  
Sbjct: 86  SFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPAT 145
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL 296
            P         +P    + Y   K   E   M     + V V   R+ N  GPR+ +
Sbjct: 146 VPIPID-----SPTAPFTSYGISKTAGEAFLM----MSDVPVVSLRLANVTGPRLAI 193

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--------LVHHFRNPRFELIRHDVVEP 176
           AG++GSH V +L++ G   +VIDNF    +           V        E    D+++ 
Sbjct: 11  AGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70
Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-T 228
             L+          + H A   +       P+   + N+ GT+ +L + K  G K L+ +
Sbjct: 71  GALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFS 130
Query: 229 STSEVYGDPLEHPQKETY--WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           S++ VYG+P   P  E +   G  NP G+   + E     E +           V + R 
Sbjct: 131 SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIE-----EMIRDLCQADKTWNVVLLRY 185
Query: 287 FNTYGPRM--CL-DDGRVVSN----FVAQAI--RRQPMTVYGDGKQTRSFQYVSDLVH 335
           FN  G     C+ +D + + N    +V+Q    RR+ + V+G+   T     V D +H
Sbjct: 186 FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--------LVHHFRNPRFELIRHDVVEP 176
           AG++GSH V +L++ G   +VIDNF    +           V        E    D+++ 
Sbjct: 11  AGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70
Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-T 228
             L+          + H A   +       P+   + N+ GT+ +L + K  G K L+ +
Sbjct: 71  GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFS 130
Query: 229 STSEVYGDPLEHPQKETY--WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           S++ VYG+P   P  E +   G  NP G+   + E     E +           V + R 
Sbjct: 131 SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIE-----EMIRDLCQADKTWNVVLLRY 185
Query: 287 FNTYGPRM--CL-DDGRVVSN----FVAQAI--RRQPMTVYGDGKQTRSFQYVSDLVH 335
           FN  G     C+ +D + + N    +V+Q    RR+ + V+G+   T     V D +H
Sbjct: 186 FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--------LVHHFRNPRFELIRHDVVEP 176
           AG++GSH V +L++ G   +VIDNF    +           V        E    D+++ 
Sbjct: 11  AGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70
Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-T 228
             L+          + H A   +       P+   + N+ GT+ +L + K  G K L+ +
Sbjct: 71  GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFS 130
Query: 229 STSEVYGDPLEHPQKETY--WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           S++ VYG+P   P  E +   G  NP G+   + E +   +    D    A     + R 
Sbjct: 131 SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIE-EMIRDLCQADKTWNA----VLLRY 185
Query: 287 FNTYGPRM--CL-DDGRVVSN----FVAQAI--RRQPMTVYGDGKQTRSFQYVSDLVH 335
           FN  G     C+ +D + + N    +V+Q    RR+ + V+G+   T     V D +H
Sbjct: 186 FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-156
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-138
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-136
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-125
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-115
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-105
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-91
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-68
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-63
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-63
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-57
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	4e-57
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	5e-55
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	8e-54
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	5e-53
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-52
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	3e-52
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-49
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	5e-49
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	2e-48
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-48
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	1e-41
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-40
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-40
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-40
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	5e-37
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-31
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	2e-28
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	1e-27
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	5e-27
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	6e-25
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	1e-22
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	3e-21
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	9e-18
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	7e-17
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-16
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	1e-15
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	2e-15
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-15
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	2e-14
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-14
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	9e-14
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-12
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-12
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-12
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	5e-11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-10
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	2e-10
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	1e-09
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	2e-09
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	4e-09
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	4e-09
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	5e-08
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	8e-08
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-07
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	2e-07
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	7e-07
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	8e-05
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	1e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	4e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	6e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	9e-04

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  439 bits (1131), Expect = e-156
 Identities = 158/243 (65%), Positives = 188/243 (77%)

Query: 92  SFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT 151
           S   H   S G +       + + R RI++TGGAGFVGSHL DKL+  G EV V+DNFFT
Sbjct: 3   SSHHHHHHSSGRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62

Query: 152 GRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGT 211
           GRK N+ H   +  FELI HDVVEP+ +EVDQIYHLA PASP +Y YNP+KT+KTN +GT
Sbjct: 63  GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 122

Query: 212 LNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM 271
           LNMLGLAKRVGA+ LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+  
Sbjct: 123 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 182

Query: 272 DYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVS 331
            Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVS
Sbjct: 183 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 242

Query: 332 DLV 334
           DLV
Sbjct: 243 DLV 245

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  395 bits (1017), Expect = e-138
 Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 19/233 (8%)

Query: 117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-- 173
           +R+++ G  GF+G+HL ++L+     EV  +D       D +     +P F  +  D+  
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 174 ----VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS 229
               +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 230 TSEVYGDPLEHPQKETYWG-NVNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           TSEVYG   +    E +    V P+ + R  Y   K+  + +   Y    G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 288 NTYGPRM------CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           N  GPR+       +   R ++  +   +   P+ +   GKQ R F  + D +
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 229

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  391 bits (1005), Expect = e-136
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 22/256 (8%)

Query: 95  FHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK 154
            H     G    +       +  ++++ G  GF+G HL  ++++  D  +   +  T R 
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL 62

Query: 155 DNLVHHFRNPRFELIRHDV------VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNV 208
            +LV H    R      D+      VE  + + D I  L   A+P  Y   P++  + + 
Sbjct: 63  GDLVKH---ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDF 119

Query: 209 MGTLNMLGLAKRVGAKFLLTSTSEVYG---DPLEHPQKETY-WGNVNPIGERSCYDEGKR 264
              L ++  A + G   +  STSEVYG   D    P      +G +N    R  Y   K+
Sbjct: 120 EANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP--RWIYACSKQ 177

Query: 265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMC------LDDGRVVSNFVAQAIRRQPMTVY 318
             + +   Y    G+   + R FN  GP +           RVV+ F+   +R + +++ 
Sbjct: 178 LMDRVIWGYGM-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV 236

Query: 319 GDGKQTRSFQYVSDLV 334
             G Q R+F YV D +
Sbjct: 237 DGGSQKRAFTYVDDGI 252

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  363 bits (933), Expect = e-125
 Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 13/231 (5%)

Query: 114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV 173
              L+I +TG  GF+ SH+  +L   G  VI  D     + +++        F L+   V
Sbjct: 27  SENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRV 83

Query: 174 VE---PILLEVDQIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLT 228
           +E    +   VD +++LA     + + + N    +  N M + NM+  A+  G  +F   
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA 143

Query: 229 STSEVYGDPLEHPQKETY--WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           S++ +Y +  +           +  P   +  +   K   E L   Y++  G+E RI R 
Sbjct: 144 SSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRF 203

Query: 287 FNTYGPRMCLDDGR--VVSNFVAQAIRR-QPMTVYGDGKQTRSFQYVSDLV 334
            N YGP      GR    + F  +A        ++GDG QTRSF ++ + V
Sbjct: 204 HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 254

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  336 bits (865), Expect = e-115
 Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 26/265 (9%)

Query: 94  QFHRTSSFGAKTGRVPVGIGRRRL---RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNF 149
             H +S    +   +PV +   +L    ++V GGAGFVGS+LV +L++ G ++V V+DN 
Sbjct: 7   HHHHSSGLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66

Query: 150 FTGRKDNLVHHFRNPRFELIRHDVVEPILL-----EVDQIYHLACPASPVHYKYNPVKTI 204
            +  K N+  H   P        + +  LL     E D ++HLA         ++P+   
Sbjct: 67  LSAEKINVPDH---PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADH 123

Query: 205 KTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGD-PLEHPQKETYWGNVNPIGERSCYDE 261
           + N + TL +    K      K + ++      +   +  +       V+     S Y  
Sbjct: 124 ENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSM 183

Query: 262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR-----------VVSNFVAQAI 310
            K   E  ++ YH+   +    AR  N YGP   L  GR           V   F+ +A+
Sbjct: 184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL 243

Query: 311 RRQPMTVYGDGKQTRSFQYVSDLVH 335
           +  P+ +   G  TR F +V D+ +
Sbjct: 244 KGMPLPLENGGVATRDFIFVEDVAN 268

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  309 bits (793), Expect = e-105
 Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 18/222 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK---DNLVHHFRNPRFELIRHDVV 174
           RI++TGGAGF+G HL   L+  G+EV V+D+         +        P  EL   D+ 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS 68

Query: 175 EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
                +V  +YHLA   S       P+  +  NV    ++L L   VG  K ++ ST EV
Sbjct: 69  -----DVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGSTCEV 122

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE-VRIARIFNTYGP 292
           YG     P  E      +P+  RS Y   K   E +   + R +    V I R FN YGP
Sbjct: 123 YGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGP 177

Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
                   +V    A  + R  + V GDG+Q R F Y++D+V
Sbjct: 178 GE--RPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVV 217

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  275 bits (705), Expect = 1e-91
 Identities = 77/222 (34%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RIVVTGGAGF+GSHLVDKL++ G EV+V+DN  +GR++ +     NP  EL   D+ +  
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS 56

Query: 178 LLE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEV 233
                  D ++H A           P+     NV+ T N+L  A++ G +  +  S+S V
Sbjct: 57  WGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTV 116

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGD    P  E       P    S Y   K   E +   Y R  GV     R  N  GPR
Sbjct: 117 YGDADVIPTPEEE-----PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPR 171

Query: 294 MCLDDGRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLV 334
           +      V+ +F+ +  R    + V GDG Q +S+ YV D V
Sbjct: 172 L---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV 210

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  216 bits (552), Expect = 1e-68
 Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 24/223 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I VTGG GF+G ++V+ + + G+  I++      +  N         +E    D     
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIND--------YEYRVSDYTLED 55

Query: 178 LLE----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
           L+     VD + HLA            +     N + T N+            +  ST  
Sbjct: 56  LINQLNDVDAVVHLAATRG-SQG---KISEFHDNEILTQNLYDACYENNISNIVYASTIS 111

Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            Y D    P  E       P      Y   K   E +   Y R  G+ ++  R  + YG 
Sbjct: 112 AYSDETSLPWNEKEL--PLPD---LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF 166

Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
                +  +++ F  QA   + +T++ +    R F Y  D   
Sbjct: 167 NE--KNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK 207

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  203 bits (518), Expect = 1e-63
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
            IVVTGGAGF+GSH+VDKL +  +E++VIDN  +G ++ +     N    L++ D+    
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSE-SNEIVVIDNLSSGNEEFV-----NEAARLVKADLAADD 56

Query: 178 LLE----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
           + +     ++++H+A          NP +  + NV+ T  +L   ++ G    + TSTS 
Sbjct: 57  IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST 116

Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
           VYG+    P  E Y    +PI   S Y   K   E L   Y     ++  I R  N  G 
Sbjct: 117 VYGEAKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGR 171

Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
           R     G +    +      + + + G+G+Q +S+ Y+SD V
Sbjct: 172 RS--THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV 211

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  203 bits (518), Expect = 4e-63
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 19/231 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRH 171
             ++TG AGF+GS+L++ L+    +V+ +DNF TG + NL      V   +   F+ I+ 
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 88

Query: 172 DV-----VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-F 225
           D+            VD + H A   S      +P+ +  TN+ G LNML  A+    + F
Sbjct: 89  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 148

Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
              ++S  YGD    P+ E   G   P+   S Y   K   E     + R  G      R
Sbjct: 149 TYAASSSTYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGFSTIGLR 203

Query: 286 IFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            FN +G R   +     V+  + +  I+   + + GDG+ +R F Y+ + V
Sbjct: 204 YFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  187 bits (478), Expect = 3e-57
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 21/233 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRH 171
             ++TG AGF+GS+L++KL+     VI +DNF TG + NL      V   +  RF  I  
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG 86

Query: 172 DV-----VEPILLEVDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAK- 224
           D+      E ++  VD + H A   S V     +P+ T  TN+ G LN+L  AK    + 
Sbjct: 87  DIRDLTTCEQVMKGVDHVLHQAALGS-VPRSIVDPITTNATNITGFLNILHAAKNAQVQS 145

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
           F   ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGL 200

Query: 285 RIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R FN +G R   +     V+  + A  ++   + + GDG+ +R F Y+ +++ 
Sbjct: 201 RYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score =  194 bits (496), Expect = 4e-57
 Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 23/268 (8%)

Query: 82  HALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD 141
             +  +Q  Q+    + S   ++    P    RRR R+++ G  GF+G+HL ++L+    
Sbjct: 285 ITMQGSQLAQTLGLVQGSRLNSQ----PACTARRRTRVLILGVNGFIGNHLTERLLREDH 340

Query: 142 -EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPILLEVDQIYHLACPASPV 194
            EV  +D       D +     +P F  +  D+      +E  + + D +  L   A+P+
Sbjct: 341 YEVYGLDI----GSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPI 396

Query: 195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNV-NPI 253
            Y  NP++  + +    L ++    +   + +  STSEVYG   +    E +   +  P+
Sbjct: 397 EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV 456

Query: 254 G-ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM------CLDDGRVVSNFV 306
              R  Y   K+  + +   Y    G++  + R FN  GPR+       +   R ++  +
Sbjct: 457 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI 516

Query: 307 AQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
              +   P+ +   GKQ R F  + D +
Sbjct: 517 LNLVEGSPIKLIDGGKQKRCFTDIRDGI 544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  182 bits (464), Expect = 5e-55
 Identities = 48/219 (21%), Positives = 76/219 (34%), Gaps = 43/219 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
            IV+TG  GFVG +L   L    D  +  +                       + + +E 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELES 42

Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236
            LL+ D I HLA    P     +  +    NV    ++L +  R   K  +  +S +   
Sbjct: 43  ALLKADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQAT 98

Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL 296
             ++P                 Y E K   E L  +Y    G  V I R  N +G     
Sbjct: 99  Q-DNP-----------------YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKP 140

Query: 297 DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           +   V++ F  +  R + + V  D     +  YV D+V 
Sbjct: 141 NYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVA 178

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  178 bits (454), Expect = 8e-54
 Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 29/226 (12%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           ++ +TG  G +GSH+ + L++RGD+V+ IDNF TGR+++L  H   P    +   + +  
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PNLTFVEGSIADHA 79

Query: 178 LLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTS 229
           L+         D + H A          +      TN +G  N++  AK+     F+   
Sbjct: 80  LVNQLIGDLQPDAVVHTAASYKDPD---DWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQ 136

Query: 230 TSEVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           T+  YG  P++ P +  +    NP    S Y   K   E     Y   +G++    R+ N
Sbjct: 137 TALCYGVKPIQQPVRLDH--PRNPA--NSSYAISKSANED----YLEYSGLDFVTFRLAN 188

Query: 289 TYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
             GPR        +  F  +    +   V    K  R F +V DL 
Sbjct: 189 VVGPRNVSG---PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLA 228

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  177 bits (451), Expect = 5e-53
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 32/237 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVH-----HFRN---PRFE 167
            I++TGGAGFVGS+L     +     +V+V+D F +    +        HF+N    + E
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE 71

Query: 168 LIRHDVVEPILLE------VDQIYHL-ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR 220
           +I  D+  P+ L        D ++H  A   + +    N    +KTN    LN+L +A+ 
Sbjct: 72  VIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTML---NQELVMKTNYQAFLNLLEIARS 128

Query: 221 VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE 280
             AK +  S++ VYG+  + P       N +P    + Y   K   +   + +       
Sbjct: 129 KKAKVIYASSAGVYGNT-KAPNVVGK--NESPE---NVYGFSKLCMDEFVLSHS--NDNV 180

Query: 281 VRIARIFNTYGPRMCLDDGR---VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
               R FN YGPR      +   +V      A+  + + ++  G+Q R F Y+ D++
Sbjct: 181 QVGLRYFNVYGPREF-YKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  174 bits (444), Expect = 1e-52
 Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 23/228 (10%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP 176
           I+VTGGAGF+GS++V  L D+G  +++V+DN   G K  NLV    N    + + D +  
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLIQ 59

Query: 177 ILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231
           I+       V+ I+H    +S   +    +  +  N   +  +L         FL  S++
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYASSA 117

Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
             YG       +        P+   + Y   K   +         A  ++   R FN YG
Sbjct: 118 ATYGGRTSDFIESR--EYEKPL---NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYG 172

Query: 292 PRMCLD-DGR---VVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLV 334
           PR      G    V  +   Q    + P    G     R F YV D+ 
Sbjct: 173 PRE--GHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 218

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  175 bits (445), Expect = 3e-52
 Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 19/227 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVE 175
            I+VTGGAGF+GS++V  L D+G  +++V+DN   G K  NLV    N    + + D + 
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLI 105

Query: 176 PILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
            I+       V+ I+H    +S   +    +  +  N   +  +L         FL  S+
Sbjct: 106 QIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYASS 163

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           +  YG       +        P+   + +   K   +         A  ++   R FN Y
Sbjct: 164 AATYGGRTSDFIESRE--YEKPL---NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVY 218

Query: 291 GPRMCLDD--GRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLV 334
           GPR         V  +   Q    + P    G     R F YV D+ 
Sbjct: 219 GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 265

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  167 bits (425), Expect = 1e-49
 Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 25/228 (10%)

Query: 119 IVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           I+VTG +G +G+ LV  L ++ G + ++  +                  + I  DV    
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQR---------DTGGIKFITLDVSNRD 52

Query: 178 LLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTS 229
            ++       +D I+HLA   S    + +P    K N+ GT N+L  AK+    K ++ S
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILS-AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPS 111

Query: 230 TSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           T  V+G      +      ++     R+ +   K  AE L   Y+   G++VR  R    
Sbjct: 112 TIGVFGPETPKNKVP----SITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI 167

Query: 290 YGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
              +     G           A++R+    Y    +     Y+ D + 
Sbjct: 168 ISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALK 215

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  165 bits (420), Expect = 5e-49
 Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 22/228 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           +I++ G  G +G+ L  KL    G E ++  +      D +     +  FE++  + ++ 
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV----NSGPFEVV--NALDF 57

Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLT 228
             +E       +  IY +A   S    + NP      N+    ++L LAK     K    
Sbjct: 58  NQIEHLVEVHKITDIYLMAALLS-ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116

Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           S+  V+G          Y   + P    + Y   K+  E     YH   GV+VR  R   
Sbjct: 117 SSIAVFGPTTPKENTPQY-TIMEPS---TVYGISKQAGERWCEYYHNIYGVDVRSIRYPG 172

Query: 289 TYGPRMCLDDGR--VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
                     G      +   +AI  +    +   +      Y+ D +
Sbjct: 173 LISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI 220

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  163 bits (416), Expect = 2e-48
 Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 36/238 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R++VTGGAGF+GSH+V+ L+ RG EV V+DN  TG+++N+            R D+ +  
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKE 56

Query: 178 LLE-------VDQIYHLAC----PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KF 225
            +E          + H A       S V    +PV   + N++G LN+L   ++ G  K 
Sbjct: 57  GVERAFREFRPTHVSHQAAQASVKVS-VE---DPVLDFEVNLLGGLNLLEACRQYGVEKL 112

Query: 226 LLTSTSE-VYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           +  ST   +YG+ P     +ET+     P    S Y   K   E     Y +  G++   
Sbjct: 113 VFASTGGAIYGEVPEGERAEETW--PPRPK---SPYAASKAAFEHYLSVYGQSYGLKWVS 167

Query: 284 ARIFNTYGPRMCLDDGR--VVSNFVAQAIRRQPMTVYG-----DGKQTRSFQYVSDLV 334
            R  N YGPR     G   VV+ F  + ++  P+T+Y      D    R + YV D+ 
Sbjct: 168 LRYGNVYGPRQD-PHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA 224

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  162 bits (411), Expect = 3e-48
 Identities = 49/229 (21%), Positives = 85/229 (37%), Gaps = 39/229 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           R++VTG AG VGS +   L     EV + D    G  +           E++  D+    
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAH--------EEIVACDLADAQ 55

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPV-KTIKTNVMGTLNMLGLAKRVGAK-FLLTST 230
            V  ++ + D I HL      V     P    ++ N++G  N+   A+ +G    +  S+
Sbjct: 56  AVHDLVKDCDGIIHLG--GVSV---ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           +   G      + +T      P    S Y   K   E L   Y+    +E    RI + +
Sbjct: 111 NHTIGYYPRTTRIDTEVP-RRPD---SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCF 166

Query: 291 GPRMCLDDGRVVSNFV-----AQAIRR-------QPMTVYGDGKQTRSF 327
                  D R+++ ++      + ++R           VYG    T S+
Sbjct: 167 PKPK---DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESW 212

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  146 bits (371), Expect = 1e-41
 Identities = 59/232 (25%), Positives = 87/232 (37%), Gaps = 41/232 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RI++TGGAG +GS+L++  + +G E++VIDNF TG+++ L          +I   V +  
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---PVAGLSVIEGSVTDAG 78

Query: 178 LLE-------VDQIYHLA----CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-F 225
           LLE          + H A     P                NV G++N+   A + G K  
Sbjct: 79  LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAAT-------NVQGSINVAKAASKAGVKRL 131

Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
           L   T+  YG P   P          P    + Y   K   E   M       V V   R
Sbjct: 132 LNFQTALCYGRPATVPIPIDS--PTAPF---TSYGISKTAGEAFLMMS----DVPVVSLR 182

Query: 286 IFNTYGPRMCLDDGR--VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           + N  GPR          +  F  +    Q    +      R F  +SD + 
Sbjct: 183 LANVTGPR-----LAIGPIPTFYKRLKAGQK--CFCSD-TVRDFLDMSDFLA 226

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  146 bits (369), Expect = 1e-40
 Identities = 56/274 (20%), Positives = 80/274 (29%), Gaps = 59/274 (21%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------------------LVH 159
           R++V GG G+ G      L  +  EV ++DN      D+                     
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 160 HFRNPRFELIRHDVVEPILLE-------VDQIYHLACPASP-----VHYKYNPVKTIKTN 207
                  EL   D+ +   L         D + H            +  +   V T   N
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFG--EQRSAPYSMIDRSRAVYTQHNN 130

Query: 208 VMGTLNMLGLAKR--VGAKFLLTSTSEVYGDPLEHPQKETY---------WGNVNPIGER 256
           V+GTLN+L   K        +   T   YG P     +E Y              P    
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP-NIDIEEGYITITHNGRTDTLPYPKQAS 189

Query: 257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM---------------CLDDGRV 301
           S Y   K           +  G+          YG +                    G  
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 302 VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           ++ F  QA    P+TVYG G QTR +  + D V 
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 283

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  144 bits (365), Expect = 1e-40
 Identities = 45/238 (18%), Positives = 76/238 (31%), Gaps = 32/238 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG-------DEVIVIDNFFTGRKDNLVHHFRNPRFELIR 170
            I + G AG VG  L  +L+  G       ++  +ID F             +   +   
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----SGAVDARA 70

Query: 171 HDVVEPILLE------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA- 223
            D+  P   E       D I+HLA   S      +  K  + N+ GT  +    +     
Sbjct: 71  ADLSAPGEAEKLVEARPDVIFHLAAIVSGEAEL-DFDKGYRINLDGTRYLFDAIRIANGK 129

Query: 224 -----KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
                + + TS+  V+G PL +P  + +     P+   + Y   K   E L  DY R   
Sbjct: 130 DGYKPRVVFTSSIAVFGAPLPYPIPDEFH--TTPL---TSYGTQKAICELLLSDYSRRGF 184

Query: 279 VEVRIARIFNTYGPRMCLDDGR--VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
            +    R+          +       SN + + +  Q   +                V
Sbjct: 185 FDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAV 242

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  140 bits (356), Expect = 4e-40
 Identities = 42/229 (18%), Positives = 76/229 (33%), Gaps = 39/229 (17%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           R++VTG AG +G  + ++L    + + + D         L      P  E ++ D+    
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADL------SPLDPA--GPNEECVQCDLADAN 56

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS 231
            V  ++   D I HL      V   +  +  ++ N++G  N+   A+  G    +  S++
Sbjct: 57  AVNAMVAGCDGIVHLG--GISVEKPFEQI--LQGNIIGLYNLYEAARAHGQPRIVFASSN 112

Query: 232 EVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
              G  P              P      Y   K   E L   Y    G E  + RI +  
Sbjct: 113 HTIGYYPQTERLGPDV-----PARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCT 167

Query: 291 GPRMCLDDGRVVSNFV-----AQAIRR-------QPMTVYGDGKQTRSF 327
                 ++ R++S +         I             V+G       +
Sbjct: 168 PEP---NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW 213

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  135 bits (341), Expect = 5e-37
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 35/248 (14%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDV--- 173
           ++++TGG GF+GS+L    + +G ++IV DN    G  DNL        FE +  D+   
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62

Query: 174 --VEPILLE--VDQIYHLACPASPVHYK---YNPVKTIKTNVMGTLNMLGLAKR--VGAK 224
             V  ++ +   D  +HL   A  V       NP    + NV GTLN+L   ++      
Sbjct: 63  NDVTRLITKYMPDSCFHL---AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG------------KRTAETLTMD 272
            + +ST++VYGD LE  +          + + + YDE             K  A+   +D
Sbjct: 120 IIYSSTNKVYGD-LEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 178

Query: 273 YHRGAGVEVRIARIFNTYGPR-MCLDDGRVVSNFVAQAIRR-----QPMTVYGDGKQTRS 326
           Y R  G+   + R  + YG R     D   V  F  +A+       +P T+ G+GKQ R 
Sbjct: 179 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 238

Query: 327 FQYVSDLV 334
             +  D++
Sbjct: 239 VLHAEDMI 246

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  120 bits (303), Expect = 1e-31
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 22/237 (9%)

Query: 106 GRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR 165
              P+      ++  V G  G +G H    +   G ++++I      R  + +       
Sbjct: 3   DEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIH-----RPSSQIQRLAYLE 57

Query: 166 FELIRHDVVEPILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR 220
            E    ++++   LE     +D +   A        ++     + + +  T        +
Sbjct: 58  PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEE--VASALGQTNPFYAACLQ 115

Query: 221 VGAK-FLLTSTSEVYG-DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
                 L   ++      P   P  E  + +  P G +S Y   K   +    +  R  G
Sbjct: 116 ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG-KSSYVLCKWALDEQAREQAR-NG 173

Query: 279 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           + V I       G      D    +  V  AI    MT Y  G   R+    ++   
Sbjct: 174 LPVVIGIPGMVLGEL----DIGPTTGRVITAIGNGEMTHYVAG--QRNVIDAAEAGR 224

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score =  111 bits (280), Expect = 2e-28
 Identities = 71/242 (29%), Positives = 104/242 (42%), Gaps = 48/242 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG------DEVIVIDNF-FTGRKDNLVHHFRNPRFELIR 170
           R++VTGGAGF+GSH V +L+         DEVIV+D+  + G + NL     +PR   + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDV-----VEPILLEVDQIYHLACPA-SPV----HYKYNPVKTIKTNVMGTLNMLGLAKR 220
            D+     +   L  VD I H A  A S V              +TNV GT  +L  A  
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFA--AESHVDRSIA---GASVFTETNVQGTQTLLQCAVD 116

Query: 221 VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV 279
            G  + +  ST++VYG  ++       W   +P+   S Y   K  ++ +   YHR  G+
Sbjct: 117 AGVGRVVHVSTNQVYGS-IDSG----SWTESSPLEPNSPYAASKAGSDLVARAYHRTYGL 171

Query: 280 EVRIARIFNTYG---------PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYV 330
           +VRI R  N YG         P             V   +    + +YGDG   R + + 
Sbjct: 172 DVRITRCCNNYGPYQHPEKLIPLF-----------VTNLLDGGTLPLYGDGANVREWVHT 220

Query: 331 SD 332
            D
Sbjct: 221 DD 222

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score =  109 bits (275), Expect = 1e-27
 Identities = 66/244 (27%), Positives = 98/244 (40%), Gaps = 46/244 (18%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV- 173
            I+VTGGAGF+GS+ V  + +      V V+D   + G K NL       R EL+  D+ 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA-ILGDRVELVVGDIA 64

Query: 174 ----VEPILLEVDQIYHLACPA-SPV----HYKYNPVKTIKTNVMGTLNMLGLAKRVGAK 224
               V+ +  + D I H A  A S      +   +P   I TN +GT  +L  A++   +
Sbjct: 65  DAELVDKLAAKADAIVHYA--AESHNDNSLN---DPSPFIHTNFIGTYTLLEAARKYDIR 119

Query: 225 FLLTSTSEVYGD-PLEHPQKETYWGNV------NPIGERSCYDEGKRTAETLTMDYHRGA 277
           F   ST EVYGD PL         G              S Y   K  ++ +   + R  
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 179

Query: 278 GVEVRIARIFNTYG---------PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQ 328
           GV+  I+   N YG         PR   +            +      +YG+GK  R + 
Sbjct: 180 GVKATISNCSNNYGPYQHIEKFIPRQITN-----------ILAGIKPKLYGEGKNVRDWI 228

Query: 329 YVSD 332
           + +D
Sbjct: 229 HTND 232

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score =  107 bits (270), Expect = 5e-27
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 47/240 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV- 173
           +++VTGG GF+GS+ +  ++++    EVI ID   +     NL     +PR+  ++ DV 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVA 64

Query: 174 ----VEPILLEVDQIYHLACPA-SPV----HYKYNPVKTIKTNVMGTLNMLGLAKR--VG 222
               V+ ++ +VD + HLA  A S V        +P   + +NV+GT  +L   +R    
Sbjct: 65  DYELVKELVRKVDGVVHLA--AESHVDRSIS---SPEIFLHSNVIGTYTLLESIRRENPE 119

Query: 223 AKFLLTSTSEVYGDPLEHPQ-KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEV 281
            +F+  ST EVYGD +      E      + +   S Y   K  ++ L + + R   +  
Sbjct: 120 VRFVHVSTDEVYGD-ILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNA 173

Query: 282 RIARIFNTYG---------PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
            I R  N YG         P+  +           +A     + +YG GK  R + YV D
Sbjct: 174 SITRCTNNYGPYQFPEKLIPKTII-----------RASLGLKIPIYGTGKNVRDWLYVED 222

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score =  102 bits (256), Expect = 6e-25
 Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 47/263 (17%)

Query: 96  HRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF-FTG 152
           H   S G   G   +      + I+VTGGAGF+GS+ V  ++      ++I  D   ++G
Sbjct: 4   HHHHSSGVDLGTENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG 63

Query: 153 RKDNLVHHFRNPRFELIRHDVVEPILLE-------VDQIYHLACPA-SPV----HYKYNP 200
             +N+     +P +  ++ ++    LLE       V  I + A  A S V        NP
Sbjct: 64  NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFA--AESHVDRSIE---NP 118

Query: 201 VKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD-PLEHPQKETYWGNVNPIGERSC 258
           +    TNV+GT+ +L L K+      +  ST EVYG         E       P+   S 
Sbjct: 119 IPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPLAPNSP 173

Query: 259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR---------MCLDDGRVVSNFVAQA 309
           Y   K +A+ + + Y++   + V + R  N YGP          M              A
Sbjct: 174 YSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVT-----------NA 222

Query: 310 IRRQPMTVYGDGKQTRSFQYVSD 332
           +  + + +YGDG   R + +V+D
Sbjct: 223 LEGKKLPLYGDGLNVRDWLHVTD 245

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 96.0 bits (240), Expect = 1e-22
 Identities = 69/254 (27%), Positives = 105/254 (41%), Gaps = 56/254 (22%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-- 173
           +I++TGGAGF+GS +V  +I    D V+ ID   + G  ++L     + R+     D+  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 174 ---VEPILLE--VDQIYHLACPA-SPV----HYKYNPVKTIKTNVMGTLNML-------- 215
              +  I  +   D + HLA  A S V         P   I+TN++GT  +L        
Sbjct: 62  SAEITRIFEQYQPDAVMHLA--AESHVDRSIT---GPAAFIETNIVGTYALLEVARKYWS 116

Query: 216 --GLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE------RSCYDEGKRTAE 267
             G  K+   +F   ST EVYGD L HP +      +    E       S Y   K +++
Sbjct: 117 ALGEDKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPR---------MCLDDGRVVSNFVAQAIRRQPMTVY 318
            L   + R  G+   +    N YGP          + L            A+  +P+ +Y
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVIL-----------NALEGKPLPIY 224

Query: 319 GDGKQTRSFQYVSD 332
           G G Q R + YV D
Sbjct: 225 GKGDQIRDWLYVED 238

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 91.4 bits (228), Expect = 3e-21
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 50/230 (21%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           I++ GGAG++GSH V KL+D G  V+V+DN  TG +D +         +    D+ +   
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRDKAF 58

Query: 179 LE-------VDQIYHLACPAS---------PVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 222
           L        ++ + H A  A          P+ Y  N       NV G L +L +     
Sbjct: 59  LRDVFTQENIEAVMHFA--ADSLVGVSMEKPLQYYNN-------NVYGALCLLEVMDEFK 109

Query: 223 AK-FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEV 281
              F+ +ST+  YG+       E      NP    + Y E K   E +   Y + + +  
Sbjct: 110 VDKFIFSSTAATYGEVDVDLITEET--MTNPT---NTYGETKLAIEKMLHWYSQASNLRY 164

Query: 282 RIARIFNTYGPRMCLDDGRV------VSN---FVAQAI--RRQPMTVYGD 320
           +I R FN  G      +G +       ++    V Q    +R+ + ++GD
Sbjct: 165 KIFRYFNVAG---ATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGD 211

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 81.5 bits (202), Expect = 9e-18
 Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 26/204 (12%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R ++TG AGFVG +L + L ++  EV         +  N+         +++    V+ +
Sbjct: 14  RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMIS----LDIMDSQRVKKV 69

Query: 178 LLEV--DQIYHLACPA-SPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTS 231
           + ++  D I+HLA  A S V   + N   T  TNV GTL++L   +      + L   +S
Sbjct: 70  ISDIKPDYIFHLA--AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSS 127

Query: 232 EVYG--DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           E YG   P E P  E      N +   S Y   K +   L   Y +  G+++   R FN 
Sbjct: 128 EEYGMILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNH 182

Query: 290 YGPRMCLDDGRVVSNFVAQAIRRQ 313
            GP            FV Q   +Q
Sbjct: 183 IGPGQ----SL---GFVTQDFAKQ 199

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 79.0 bits (196), Expect = 7e-17
 Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 59/256 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVE 175
            I+VTGGAG++GSH   +L+  G +V++ DN    +++ +  +             DV +
Sbjct: 7   TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD 66

Query: 176 PILLE-------VDQIYHLA-------CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV 221
              L        +    H A         A P+ Y  N       N+   L++L + +  
Sbjct: 67  ERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRN-------NLDSLLSLLRVMRER 119

Query: 222 GAKFLLTSTS-EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE 280
             K ++ S+S  VYG P   P  ET+     P+   + Y + K  AE +  D    A   
Sbjct: 120 AVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEA-ADPS 173

Query: 281 VRIA--RIFNTYG----------PRMCLDDGRVVSN---FVAQ-AI-RRQPMTVYG---- 319
            R+A  R FN  G          P        + +N   +VAQ A+ + + + V+G    
Sbjct: 174 WRVATLRYFNPVGAHESGLIGEDPA------GIPNNLMPYVAQVAVGKLEKLRVFGSDYP 227

Query: 320 --DGKQTRSFQYVSDL 333
             DG   R + +V DL
Sbjct: 228 TPDGTGVRDYIHVVDL 243

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 78.0 bits (192), Expect = 2e-16
 Identities = 54/243 (22%), Positives = 88/243 (36%), Gaps = 38/243 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVI-------DNFFT--GRKDNLVHHFRNPRFEL 168
           R+ VTG  GF G  L   L   G  V           + F      D +     +     
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGD----- 65

Query: 169 IRH-DVVEPILLEV--DQIYHLACPASP-VHYKY-NPVKTIKTNVMGTLNMLGLAKRVGA 223
           IR  + +   + E   + ++H+A  A P V   Y  PV+T  TNVMGT+ +L   + VG 
Sbjct: 66  IRDQNKLLESIREFQPEIVFHMA--AQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG 123

Query: 224 K--FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY-------- 273
               +  ++ + Y +                +G    Y   K  AE +T  Y        
Sbjct: 124 VKAVVNITSDKCYDNKEWIWGYREN----EAMGGYDPYSNSKGCAELVTSSYRNSFFNPA 179

Query: 274 -HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
            +   G  V   R  N  G        R+V + +    + QP+ +  +    R +Q+V +
Sbjct: 180 NYGQHGTAVATVRAGNVIGGGD-WALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLE 237

Query: 333 LVH 335
            + 
Sbjct: 238 PLS 240

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 75.9 bits (188), Expect = 1e-15
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 60/257 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G +VI++DN    ++  L  +          +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PILLE-------VDQIYHLAC-------PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV 221
             L+        +D + H A           P+ Y  N       NV GTL ++   +  
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLISAMRAA 114

Query: 222 GAKFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRGAGV 279
             K  + S+S  VYGD  + P  E++     P G  +S Y + K   E +  D  + A  
Sbjct: 115 NVKNFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQK-AQP 168

Query: 280 EVRIA--RIFNTYG----------PRMCLDDGRVVSN---FVAQ-AI-RRQPMTVYG--- 319
           +  IA  R FN  G          P+       + +N   ++AQ A+ RR  + ++G   
Sbjct: 169 DWSIALLRYFNPVGAHPSGDMGEDPQ------GIPNNLMPYIAQVAVGRRDSLAIFGNDY 222

Query: 320 ---DGKQTRSFQYVSDL 333
              DG   R + +V DL
Sbjct: 223 PTEDGTGVRDYIHVMDL 239

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 75.2 bits (186), Expect = 2e-15
 Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 66/263 (25%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--------VHHFRNPRFELI 169
           +++VTGGAG++GSH V +L++ G   +VIDNF    +           V        E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPILLE-------VDQIYHLA-------CPASPVHYKYNPVKTIKTNVMGTLNML 215
             D+++   L+          + H A           P+ Y          N+ GT+ +L
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV-------NLTGTIQLL 116

Query: 216 GLAKRVGAKFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGERSC-YDEGKRTAETLTMDY 273
            + K  G K L+ S+S  VYG+P   P  E +     P G  +  Y + K   E +  D 
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDL 171

Query: 274 HRGAGVEVRIA--RIFNTYG----------PRMCLDDGRVVSN---FVAQ-AI-RRQPMT 316
            + A         R FN  G          P+       + +N   +V+Q AI RR+ + 
Sbjct: 172 CQ-ADKTWNAVLLRYFNPTGAHASGCIGEDPQ------GIPNNLMPYVSQVAIGRREALN 224

Query: 317 VYG------DGKQTRSFQYVSDL 333
           V+G      DG   R + +V DL
Sbjct: 225 VFGNDYDTEDGTGVRDYIHVVDL 247

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 75.5 bits (186), Expect = 3e-15
 Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 62/260 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVE 175
            ++VTGGAG++GSH V +LI+ G + +V DN      D++  +             D+ +
Sbjct: 13  IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72

Query: 176 PILLE-------VDQIYHLA-------CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV 221
              LE       +D + H A           P+ Y Y        N++GT+ +L L ++ 
Sbjct: 73  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRY-Y------HNNILGTVVLLELMQQY 125

Query: 222 GAKFLLTSTSE-VYGDPLEHPQK----ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG 276
                + S+S  VYGD    P      E       P+G  + Y   K   E +  D +  
Sbjct: 126 NVSKFVFSSSATVYGDATRFPNMIPIPEEC-----PLGPTNPYGHTKYAIENILNDLYNS 180

Query: 277 AGVEVRIA--RIFNTYG----------PRMCLDDGRVVSN---FVAQ-AI-RRQPMTVYG 319
                + A  R FN  G          P        + +N   ++AQ A+ RR+ + ++G
Sbjct: 181 DKKSWKFAILRYFNPIGAHPSGLIGEDPL------GIPNNLLPYMAQVAVGRREKLYIFG 234

Query: 320 ------DGKQTRSFQYVSDL 333
                 DG   R + +V DL
Sbjct: 235 DDYDSRDGTPIRDYIHVVDL 254

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 74.0 bits (181), Expect = 6e-15
 Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 20/230 (8%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---- 176
           + G  G +G+ L + L            +   R+        +     ++ D+ +P    
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR-TRPAWHEDNPINYVQCDISDPDDSQ 64

Query: 177 -ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK---FLLTSTSE 232
             L  +  + H+              +  + N     N+L              L +  +
Sbjct: 65  AKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 233 VYGDPLEHPQKETYWGNVNPIGE---RSCYDEGKRTAET-LTMDYHRGAGVEVRIARIFN 288
            Y  P E   K     +  P  E   R  Y       E  +  +  +  G+   + R  N
Sbjct: 123 HYMGPFESYGKIE--SHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGN 180

Query: 289 TYGPRMCLDDGRVVSNFVAQAIRRQ---PMTVYGDGKQTRSFQYVSDLVH 335
            +G         V +  V  AI +     +   G       +   SD   
Sbjct: 181 IFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 38/205 (18%)

Query: 118 RIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           R++V GGAG++GSH V  L+ D    V+++D+       +     R      ++      
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 177 ILLEV----------------DQIYHLACPASPV-H---YKY------NPVKTIKTNVMG 210
                                + ++    P   V H   +        +P+K    NV+G
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 211 TLNMLGLAKRVGAK-FLLTSTSEVYGDPLEHPQKETYWGNVNPIGER------SCYDEGK 263
            L +L           + +S++ ++G+    P   +   N  PI         S Y E K
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGN----PTMGSVSTNAEPIDINAKKSPESPYGESK 179

Query: 264 RTAETLTMDYHRGAGVEVRIARIFN 288
             AE +  D     G++    R FN
Sbjct: 180 LIAERMIRDCAEAYGIKGICLRYFN 204

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 26/174 (14%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI--VIDNFFTGRKDNLVHHFRNP---RFE-LIRH 171
            ++VTG  GFV SH+V++L++ G +V           +  NL   +      RFE  +  
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARS---ASKLANLQKRWDAKYPGRFETAVVE 69

Query: 172 DVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--K 224
           D+++      ++     + H+   AS V +     + +   + GTLN L  A    +  +
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHI---ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126

Query: 225 FLLT-STSEVYGDPLEHPQK---ETYWGNVNPIGERSCYDEGKRTAETLTMDYH 274
           F+LT ST                E  W   N           +   +     Y 
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSW---NLESIDKAKTLPESDPQKSLWVYA 177

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 68.6 bits (168), Expect = 9e-14
 Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 24/183 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           +IV+ G +GFVGS L+++ ++RG EV  +        + +     N   ++ + DV    
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAV----VRHPEKI--KIENEHLKVKKADVSSLD 59

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS 231
            V  +    D +     P        N        +   L ++   K+ G   FL+   +
Sbjct: 60  EVCEVCKGADAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113

Query: 232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
                       ++     N           K   E       +   ++           
Sbjct: 114 GSLFIAPGLRLMDSGEVPENI------LPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR 167

Query: 292 PRM 294
           P +
Sbjct: 168 PGV 170

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 40/186 (21%), Positives = 72/186 (38%), Gaps = 28/186 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI--VIDNFFTGRKDNLVHHFRNP---RFELIRHD 172
              V GG GFV S LV  L+ +G  V   V D      +  + H          ++ R D
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRD---PDNQKKVSHLLELQELGDLKIFRAD 67

Query: 173 VVEP-----ILLEVDQIYHLACPASPVHYKY-NPVK-TIKTNVMGTLNMLGLAKRVGA-- 223
           + +       +   D ++H+   A+PVH+   +P    IK  + G +N++    R  +  
Sbjct: 68  LTDELSFEAPIAGCDFVFHV---ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVK 124

Query: 224 KFLLT-STSEVYGDPLEHPQK---ETYWGNVNPIGERSC----YDEGKRTAETLTMDYHR 275
           + +LT S + V  + L+       E  W ++  +         Y   K  AE     +  
Sbjct: 125 RVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAE 184

Query: 276 GAGVEV 281
              +++
Sbjct: 185 ENNIDL 190

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 63.5 bits (154), Expect = 5e-12
 Identities = 27/205 (13%), Positives = 55/205 (26%), Gaps = 19/205 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I + G  G  GS ++++  +RG EV  I               RN       H  +  +
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIV--------------RNAGKITQTHKDINIL 47

Query: 178 LLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235
             ++    +  L+     V          + +V    +++ +     +  LL        
Sbjct: 48  QKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASL 107

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              E             + E   Y   +  A+ L       A            + P   
Sbjct: 108 QIDEDGNTLLESK---GLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGER 164

Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGD 320
             D ++  + +             D
Sbjct: 165 TGDYQIGKDHLLFGSDGNSFISMED 189

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 65.3 bits (159), Expect = 6e-12
 Identities = 41/206 (19%), Positives = 71/206 (34%), Gaps = 41/206 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVI-----------------DNFFTGRKDNLVH- 159
            +++TG  GF+G +LV +L+ R D    +                   F +G  + L H 
Sbjct: 75  TVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHF 134

Query: 160 -HFRNPRFELIRHDVVEP-----------ILLEVDQIYHLACPASPVHYKYNPVKTIKTN 207
                 R E++  D  EP           +   VD I      A+ V+  +   +    N
Sbjct: 135 KELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDS---AAMVNA-FPYHELFGPN 190

Query: 208 VMGTLNMLGLAKRVGAK-FLLTSTSEVYG-DPLEHPQKETYWGNVNPIGERSC-----YD 260
           V GT  ++ +A     K F   ST++V          ++     ++P           Y 
Sbjct: 191 VAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYG 250

Query: 261 EGKRTAETLTMDYHRGAGVEVRIARI 286
             K   E L  + +    + V + R 
Sbjct: 251 TSKWAGEVLLREANDLCALPVAVFRC 276

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 40/186 (21%), Positives = 65/186 (34%), Gaps = 28/186 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD----NLVHHFRN-----PRFEL 168
           R+ VTGG GF+GS ++  L++ G  V       T R D      V    N      +   
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNT-----TIRADPERKRDVSFLTNLPGASEKLHF 57

Query: 169 IRHDVVEPILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA 223
              D+  P            I+H A P              K  V G L +L        
Sbjct: 58  FNADLSNPDSFAAAIEGCVGIFHTASP-IDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 224 --KFLLTST--SEVYGDPLEHPQKETYWGNVNPIGER----SCYDEGKRTAETLTMDYHR 275
             +F+ TS+  +  +    +    E+ W +V+ +         Y   K  AE   +++  
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176

Query: 276 GAGVEV 281
             G++V
Sbjct: 177 QNGIDV 182

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVI--VIDNFFTGRKDNLVHHFRNP----RFELIRH 171
            + VTG +GF+GS LV +L++RG  V   V D         + H    P       L + 
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRD---PTNVKKVKHLLDLPKAETHLTLWKA 63

Query: 172 DVVEP-----ILLEVDQIYHLACPASPVHYKY-NPVK-TIKTNVMGTLNMLGLAKRVGA- 223
           D+ +       +     ++H+   A+P+ ++  +P    IK  + G L ++         
Sbjct: 64  DLADEGSFDEAIKGCTGVFHV---ATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTV 120

Query: 224 -KFLLT-STSEVYGDPLE-HPQKETYWGNVN 251
            + + T S   V     +     E+ W ++ 
Sbjct: 121 RRLVFTSSAGTVNIQEHQLPVYDESCWSDME 151

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVI----DNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           VTG  G  G++L   L+++G  V  +     +    R             +    D+ + 
Sbjct: 19  VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR---ELGIEGDIQYEDGDMADA 75

Query: 177 -----ILLEV--DQIYHLACPA-SPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVG--AKF 225
                 +++    ++Y+LA  A S V   +  PV T   + +G  ++L   ++     +F
Sbjct: 76  CSVQRAVIKAQPQEVYNLA--AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 133

Query: 226 LLTSTSEVYGDPLEHPQKET 245
              STSE++G      Q E 
Sbjct: 134 YQASTSEMFGLIQAERQDEN 153

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 29/176 (16%)

Query: 92  SFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID---- 147
           S   H   S G +        G  R   ++TG  G  GS+L + L+++G EV  I     
Sbjct: 3   SSHHHHHHSSGREN---KYFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 59

Query: 148 NFFTGRKDNL---VHHFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPA-SPVHY 196
           +F TGR ++L            +L   D+ +      I+ EV   +IY+L   A S V  
Sbjct: 60  SFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLG--AQSHVKI 117

Query: 197 KY-NPVKTIKTNVMGTLNML------GLAKRVGAKFLLTSTSEVYGDPLEHPQKET 245
            +     T   + +GTL +L      GL   V  KF   STSE+YG   E PQKET
Sbjct: 118 SFDLAEYTADVDGVGTLRLLDAVKTCGLINSV--KFYQASTSELYGKVQEIPQKET 171

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 25/146 (17%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVID----NFFTGRKDNLVH--HFRNPRFELIRHDVV 174
           +TG  G  GS+L + L+++G EV  I     +F T R D++    H  NP+F L   D+ 
Sbjct: 6   ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 175 EP-----ILLEV--DQIYHLACPA-SPVHYKY-NPVKTIKTNVMGTLNML------GLAK 219
           +      IL EV  D++Y+L   A S V   + +P  T   + MGTL +L      GL K
Sbjct: 66  DTSNLTRILREVQPDEVYNLG--AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 220 RVGAKFLLTSTSEVYGDPLEHPQKET 245
           +   +F   STSE+YG   E PQKET
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET 147

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVID----NFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
           +TG  G  G++L   L+++G EV   D     F + R             ++I  D++E 
Sbjct: 8   ITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK---ELGIENDVKIIHMDLLEF 64

Query: 177 -----ILLEV--DQIYHLACPA-SPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVG--AKF 225
                 + +V  D++Y+LA  A S V   +  P+ T + + +G L +L   + V    KF
Sbjct: 65  SNIIRTIEKVQPDEVYNLA--AQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKF 122

Query: 226 LLTSTSEVYGDPLEHPQKET 245
              STSE++G   E PQ E 
Sbjct: 123 YQASTSEMFGKVQEIPQTEK 142

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 25/129 (19%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGR----KDNLVHHFRNPRFELIRH 171
            I++TGG G  G   V K++D  +  ++IV       R    +  +   F +PR      
Sbjct: 23  TILITGGTGSFGKCFVRKVLDTTNAKKIIVYS-----RDELKQSEMAMEFNDPRMRFFIG 77

Query: 172 DV-----VEPILLEVDQIYHLAC----PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 222
           DV     +   L  VD   H A     P +    +YNP++ IKTN+MG  N++    +  
Sbjct: 78  DVRDLERLNYALEGVDICIHAAALKHVPIA----EYNPLECIKTNIMGASNVINACLKNA 133

Query: 223 -AKFLLTST 230
            ++ +  ST
Sbjct: 134 ISQVIALST 142

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R++V G  G V  +L+ +L ++G E +         ++           +++  ++ E  
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVA----MVRNEEQGPELRERGASDIVVANLEEDF 78

Query: 178 ---LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEV 233
                 +D +   A  + P        KTI  ++ G +  +  A++ G K F++ S+   
Sbjct: 79  SHAFASIDAVVFAAG-SGP---HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT 134

Query: 234 YGDPLEHP 241
             DP + P
Sbjct: 135 -VDPDQGP 141

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 16/129 (12%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD---VV 174
           +I V G  G  GS +V +   RG EV+ +      R               +  +   + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAV-----VRDPQKAADRLGATVATLVKEPLVLT 56

Query: 175 EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEV 233
           E  L  VD +             Y        ++    +++ L +        +  ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRGY-------LHLDFATHLVSLLRNSDTLAVFILGSASL 109

Query: 234 YGDPLEHPQ 242
                +HP 
Sbjct: 110 AMPGADHPM 118

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 25/171 (14%)

Query: 97  RTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID----NFFTG 152
           R+ S      +    +   R   ++TG  G  GS+L + L+ +G EV  +     NF T 
Sbjct: 9   RSDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQ 68

Query: 153 RKDNL---VHHFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPA-SPVHYKY-NP 200
           R +++    H+      +L   D+ +       +  +  D++Y+LA  A S V   +  P
Sbjct: 69  RINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLA--AQSHVAVSFEIP 126

Query: 201 VKTIKTNVMGTLNML------GLAKRVGAKFLLTSTSEVYGDPLEHPQKET 245
             T      G L +L       +      K+    +SE++G     PQ ET
Sbjct: 127 DYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS-TPPPQSET 176

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 18/130 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           +I + G  G  G   + + +  G EV V+      R  + +         ++  DV    
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVL-----VRDSSRLPSEGPRPAHVVVGDVLQAA 59

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS 231
            V+  +   D +  L           N +        G  N++   K  G    +  +++
Sbjct: 60  DVDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112

Query: 232 EVYGDPLEHP 241
            +  DP + P
Sbjct: 113 FLLWDPTKVP 122

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 9/73 (12%)

Query: 74  PPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLV 133
           P   L    A    Q  +  +F           R         L + +TG  G VG  L 
Sbjct: 114 PASTLTGMFAYRQTQLIEDLKFLS---------RTSTLFDGSPLTVAITGSRGLVGRALT 164

Query: 134 DKLIDRGDEVIVI 146
            +L   G EVI +
Sbjct: 165 AQLQTGGHEVIQL 177

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 18/118 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELI----RHDV 173
           +I + G  G VG  L+  L     ++         RK   V  + N +          + 
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAG-----ARKVEQVPQYNNVKAVHFDVDWTPEE 56

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTST 230
           +   L  +D I +++               +K ++ G + ++  A++   K F+L ST
Sbjct: 57  MAKQLHGMDAIINVSGSG--------GKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 34/202 (16%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEP 176
           +I++ G  G +G  L  +L  +G EV         R    +    +    ++ R D +  
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTG-----LRRSAQPMPAGVQTLIADVTRPDTLAS 58

Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYG 235
           I+    +I      AS    +Y+      + V G  N L   +    +     S++ VYG
Sbjct: 59  IVHLRPEILVYCVAAS----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP--- 292
             +E    E                +    AE L       A     I R    YGP   
Sbjct: 115 QEVEEWLDEDTP--PIAKDFSG---KRMLEAEAL------LAAYSSTILRFSGIYGPGRL 163

Query: 293 --------RMCLDDGRVVSNFV 306
                             +N +
Sbjct: 164 RMIRQAQTPEQWPARNAWTNRI 185

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 39/140 (27%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF--------ELI 169
            ++VTG +G  G  +  KL +  D+ +            LV   R+ +         ++ 
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKG---------LV---RSAQGKEKIGGEADVF 53

Query: 170 RHDVVEPILLE-----VDQIYHLA-------------CPASPVHYKYNPVKTIKTNVMGT 211
             D+ +   +      +D +  L                  P     +     + + +G 
Sbjct: 54  IGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 113

Query: 212 LNMLGLAKRVGAK-FLLTST 230
            N +  AK  G K  ++  +
Sbjct: 114 KNQIDAAKVAGVKHIVVVGS 133

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 16/121 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-- 173
            + + G +G  G  L+ +++++G   +V +I     GR+                 D   
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLI-----GRRKLTFDEEAYKNVNQEVVDFEK 74

Query: 174 ---VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTS 229
                      D  +           K      ++ +    L    LAK  G K F L S
Sbjct: 75  LDDYASAFQGHDVGFCCLG---TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLS 131

Query: 230 T 230
           +
Sbjct: 132 S 132

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 42.6 bits (100), Expect = 8e-05
 Identities = 35/170 (20%), Positives = 55/170 (32%), Gaps = 25/170 (14%)

Query: 124 GAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
           G G+    L   L  +G  +I      T R  + +   R    E +     EP L  V  
Sbjct: 12  GHGYTARVLSRALAPQGWRIIG-----TSRNPDQMEAIRASGAEPLLWPGEEPSLDGVT- 65

Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTSEVYGDPLEHPQ 242
             HL    +P              V+  L     A+    +++   ST+ VYGD      
Sbjct: 66  --HLLISTAPDSGGD--------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWV 115

Query: 243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            ET    + P   R     G+         +     + + + R+   YGP
Sbjct: 116 DETTP--LTPTAAR-----GRWRVMAEQQ-WQAVPNLPLHVFRLAGIYGP 157

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 18/96 (18%), Positives = 26/96 (27%), Gaps = 23/96 (23%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP 176
            I V G AG +G  +   L    +  V V D          +           + D  + 
Sbjct: 7   NICVVG-AGKIGQMIAALLKTSSNYSVTVAD-----HDLAALAVLNRMGVATKQVDAKDE 60

Query: 177 -----ILLEVD-----QIYHL------ACPASPVHY 196
                 L   D       + L      A  A+  HY
Sbjct: 61  AGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHY 96

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 35/175 (20%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVE 175
            I + G AG +   L   L+   D  I +   +  +    +      + R  +I      
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL---YGRQLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 176 PILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
           P  LE      + ++                     +     +++    R   + ++  +
Sbjct: 64  PGXLEQAVTNAEVVFV----------------GAMESGSDMASIVKALSRXNIRRVIGVS 107

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
               G   E P     W   N       Y +G+R A     +  R + +   I R
Sbjct: 108 M--AGLSGEFPVALEKWTFDNLPIS---YVQGERQAR----NVLRESNLNYTILR 153

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 11/60 (18%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE 175
           R+++ G  G  G HL+D+++      +VI        RK    H    PR +     + E
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP-----ARKALAEH----PRLDNPVGPLAE 57

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG----RKDNLVHHFRNPRFELIRHDV 173
           RI++ G  G++G H+    +D G    ++    T      K  L+  F+     ++   +
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65

Query: 174 VEP 176
            + 
Sbjct: 66  DDH 68

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 42/221 (19%)

Query: 99  SSFGAKTGRVPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNL 157
                 +GR  +        +++ G  G +  H++++L D+   +  +       R+   
Sbjct: 6   HHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLF-----ARQPAK 60

Query: 158 VHHFRNPRFELIRHDVVEPILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTL 212
           +H       ++I  DV+    L+      D +Y                 T +   +   
Sbjct: 61  IHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL--------------TGEDLDIQAN 106

Query: 213 NMLGLAKRVGAK-FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM 271
           +++   K    K  +   +  +Y    E P K   W N           +  R A     
Sbjct: 107 SVIAAMKACDVKRLIFVLSLGIYD---EVPGKFVEWNNAVIGE----PLKPFRRAA---- 155

Query: 272 DYHRGAGVE---VRIARIFN--TYGPRMCLDDGRVVSNFVA 307
           D    +G+E   +R A + +       +   +       V+
Sbjct: 156 DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVS 196

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.98
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.98
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.98
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.98
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.98
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.98
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.98
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.95
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.95
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.95
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.95
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.94
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.94
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.93
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.92
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.9
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.9
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.89
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.89
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.88
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.88
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.88
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.88
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.88
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.88
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.88
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.88
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.88
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.87
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.87
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.87
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.87
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.87
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.87
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.87
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.87
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.87
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.87
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.87
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.87
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.87
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.87
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.87
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.87
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.87
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.87
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.87
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.86
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.86
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.86
1spx_A	278	Short-chain reductase family member (5L265); paral	99.86
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.86
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.86
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.86
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.86
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.86
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.86
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.86
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.86
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.86
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.86
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.86
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.86
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.86
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.86
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.86
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.86
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.86
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.86
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.86
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.86
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.86
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.86
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.86
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.86
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.85
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.85
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.85
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.85
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.85
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.85
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.85
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.85
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.85
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.85
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.85
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.85
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.85
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.85
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.85
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.85
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.85
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.85
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.85
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.85
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.85
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.85
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.85
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.85
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.85
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.85
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.85
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.85
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.85
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.85
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.85
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.85
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.85
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.85
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.85
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.85
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.85
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.85
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.85
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.85
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.85
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.85
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.85
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.85
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.85
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.84
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.84
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.84
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.84
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.84
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.84
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.84
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.84
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.84
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.84
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.84
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.84
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.84
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.84
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.84
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.84
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.84
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.84
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.84
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.84
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.84
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.84
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.84
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.84
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.84
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.84
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.84
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.84
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.84
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.84
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.83
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.83
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.83
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.83
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.83
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.83
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.83
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.83
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.83
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.83
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.83
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.83
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.83
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.83
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.83
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.83
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.83
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.82
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.82
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.82
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.82
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.82
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.82
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.82
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.82
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.82
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.82
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.82
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.82
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.81
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.81
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.81
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.81
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.81
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.81
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.81
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.8
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.8
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.8
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.8
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.8
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.8
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.79
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.79
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.79
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.77
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.76
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.73
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.7
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.69
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.69
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.69
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.68
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.68
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.66
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.65
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.61
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.6
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.58
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.52
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.51
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.5
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.47
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.46
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.21
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.15
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.13
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.95
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.9
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.9
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.66
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.55
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.51
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.47
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.43
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.37
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.31
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.16
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.15
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.12
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.08
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.06
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.01
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.92
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.92
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.87
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.84
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.82
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.8
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.8
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.79
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.78
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.78
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.76
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.76
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.75
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.71
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.69
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.68
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.68
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.66
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.63
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.58
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.56
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.55
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.51
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.5
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.5
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.5
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.48
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.46
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.46
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.46
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.45
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.44
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.44
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.43
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.42
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.41
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.39
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.36
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.35
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.34
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.32
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.28
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.27
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.27
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.26
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.24
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.23
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.22
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.21
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.2
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.2
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.19
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.17
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.17
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.12
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.11
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.11
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.09
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.08
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.07
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.06
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.05
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.05
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.04
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.04
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.04
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.04
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.03
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.01
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.0
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.98
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.98
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.97
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.97
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.93
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.91
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.89
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.88
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.79
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.76
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.76
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.75
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.75
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.72
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.71
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.7
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.69
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.68
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.66
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.65
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.62
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.6
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.57
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.56
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.55
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.54
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.54
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.53
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.44
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.43
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.35
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.33
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.32
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.32
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	96.28
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.2
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.2
3cmm_A	1015	Ubiquitin-activating enzyme E1 1; UBA1, protein tu	96.16
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.15
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.11
1tt5_A	531	APPBP1, amyloid protein-binding protein 1; cell cy	96.1
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.1
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.09
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.09
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.08
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.05
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.04
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.03
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.0
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	95.99
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.98
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.96
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.94
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	95.92
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	95.91
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.89
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.8
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.79
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.78
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.77
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.75
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.73
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	95.73
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.7
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.68
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.67
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.62
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.6
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.56
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.55
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.54
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.53
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.47
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.46
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.45
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.45
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.42
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.41
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.35
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.34
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.33
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.32
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.32
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.3
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	95.27
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.25
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.22
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.19
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.17
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.14

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=4e-35  Score=272.46  Aligned_cols=222  Identities=69%  Similarity=1.164  Sum_probs=189.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      .++|+|||||||||||++|+++|+++|++|++++|........+........++++.+|+.++.+.++|+|||+||....
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~~  104 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP  104 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccCc
Confidence            46789999999999999999999999999999999755433333322234578999999999999999999999986543


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY  273 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~  273 (335)
                      .....++...+++|+.++.+++++|++.++++|++||..+|+.....+.+|+.|....+..+.+.|+.+|+.+|.+++.+
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  184 (343)
T 2b69_A          105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  184 (343)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            33445778899999999999999999988899999999999987777888988876667777889999999999999999


Q ss_pred             HhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          274 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       274 a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.+++++++||++||||+.......++..++..+.+++++.++++++..++|+|++|+|+
T Consensus       185 ~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  246 (343)
T 2b69_A          185 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN  246 (343)
T ss_dssp             HHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHH
T ss_pred             HHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHH
Confidence            88889999999999999998654446688888999999999888899999999999999974

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=8.6e-35  Score=270.80  Aligned_cols=218  Identities=30%  Similarity=0.430  Sum_probs=184.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC------CceEEEeccccch-----hccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN------PRFELIRHDVVEP-----ILLEV  181 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~-----~~~~v  181 (335)
                      ..++|+|||||||||||++|+++|+++|++|++++|...............      ..++++.+|+.+.     ++.++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            346789999999999999999999999999999999765443322211111      5789999999775     56789


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHH
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      |+|||+||.........++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..+.+.|+
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~  176 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE-----NIGNPLSPYA  176 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHH
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC-----CCCCCCChhH
Confidence            999999986544444557788999999999999999999987 8999999999998888888888     5667789999


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|..+|.+++.++.+.+++++++||++||||+....  ...+++.++..+.++.++.++++++..++|+|++|+|+
T Consensus       177 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  253 (351)
T 3ruf_A          177 VTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ  253 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence            9999999999999988899999999999999986432  13688899999999999999999999999999999974

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=7.9e-34  Score=263.75  Aligned_cols=216  Identities=27%  Similarity=0.459  Sum_probs=174.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCC-CccccccccCCCceEEEeccccch-----hccC--CC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEP-----ILLE--VD  182 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD  182 (335)
                      ..++|+|||||||||||++|+++|+++|  ++|++++|.... ....+........++++.+|+.+.     ++.+  +|
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            4567899999999999999999999999  678888776422 222233333346899999999875     3444  99


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCcCCCCCCCCCCChHH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDP-LEHPQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~-~~~~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      +|||+||.........++...+++|+.|+.+++++|++.++ +|||+||..+|+.. ...+.+|+     .+..+.+.|+
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-----~~~~p~~~Y~  175 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPLAPNSPYS  175 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-----SCCCCCSHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-----CCCCCCChhH
Confidence            99999997655555567888999999999999999999987 79999999999986 35577777     5677889999


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|..+|.+++.++.+.+++++++||++||||+..  ...+++.++..+..+.++.++++++..++|+|++|+|+
T Consensus       176 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  248 (346)
T 4egb_A          176 SSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQY--PEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCS  248 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC--TTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCC--ccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHH
Confidence            99999999999999888999999999999999863  34788899999999999999999999999999999974

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4.1e-33  Score=255.41  Aligned_cols=201  Identities=23%  Similarity=0.345  Sum_probs=172.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecccc----chhccCCCEEEEccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV----EPILLEVDQIYHLACPA  191 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~vD~Vih~A~~~  191 (335)
                      +|+|||||||||||++|+++|+++|++|++++|+.. ... +      ..++++.+|+.    ...+.++|+|||+|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~-~------~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-NKA-I------NDYEYRVSDYTLEDLINQLNDVDAVVHLAATR   73 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC-ccc-C------CceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence            579999999999999999999999999999999722 211 1      16788888886    22567899999999865


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      ...    ++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|.++
T Consensus        74 ~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~  144 (311)
T 3m2p_A           74 GSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEK-----ELPLPDLMYGVSKLACEHIG  144 (311)
T ss_dssp             CSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTT-----SCCCCSSHHHHHHHHHHHHH
T ss_pred             CCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCchhHHHHHHHHHHH
Confidence            433    6778889999999999999999987 7999999999998877788888     56777899999999999999


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.++.+.+++++++||+++|||+...  ..++..++..+..+.++.++++++..++|+|++|+|+
T Consensus       145 ~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~  207 (311)
T 3m2p_A          145 NIYSRKKGLCIKNLRFAHLYGFNEKN--NYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK  207 (311)
T ss_dssp             HHHHHHSCCEEEEEEECEEECSCC----CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHH
T ss_pred             HHHHHHcCCCEEEEeeCceeCcCCCC--CCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHH
Confidence            99998889999999999999998532  2788899999999999999899999999999999974

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=7.3e-33  Score=253.53  Aligned_cols=205  Identities=38%  Similarity=0.612  Sum_probs=171.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh----ccCCCEEEEccCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----LLEVDQIYHLACPAS  192 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~vD~Vih~A~~~~  192 (335)
                      |+|||||||||||++|+++|+++|++|++++|.........     ...++++.+|+.+..    +.+ |+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHHHHhhcCC-CEEEECCCCCC
Confidence            58999999999999999999999999999998765433222     356788889987753    334 99999999655


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHH
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM  271 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~  271 (335)
                      ......++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+++
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-----EPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-----CCCCCCChHHHHHHHHHHHHH
Confidence            5555667889999999999999999999887 8999999999998877788887     567778999999999999999


Q ss_pred             HHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhC-CCeEEecCCCceeeceecccccC
Q 019794          272 DYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRR-QPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       272 ~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~-~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .++.+.+++++++||+++|||+.   ...++..++..+..+ ..+.++++++..++|+|++|+|+
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  211 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRL---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVE  211 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTC---CSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHH
T ss_pred             HHHHHhCCCEEEEeeccccCcCC---CCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHH
Confidence            99998999999999999999985   346777888888777 45678899999999999999974

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.4e-33  Score=258.91  Aligned_cols=209  Identities=34%  Similarity=0.556  Sum_probs=175.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC---CCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT---GRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++|+|||||||||||++|+++|+++|++|++++|...   .....+........++++.+|+.     ++|+|||+|+.
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~d~vi~~a~~   79 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----DVRLVYHLASH   79 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----TEEEEEECCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----cCCEEEECCcc
Confidence            35789999999999999999999999999999999765   22333333333455666677765     89999999987


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ........++...++ |+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+
T Consensus        80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             CChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHHHHH
Confidence            554334456677778 99999999999999996 9999999999998877788888     5677789999999999999


Q ss_pred             HHHHHhhhCC-cEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGV-EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i-~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.++.+.++ +++++||+++|||+...  ..++..++..+..++++.++++++..++|+|++|+|+
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  218 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVD  218 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHH
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHH
Confidence            9999988899 99999999999998632  5678899999999999999999999999999999974

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-32  Score=252.79  Aligned_cols=206  Identities=33%  Similarity=0.537  Sum_probs=170.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch----hccCCCEEEEccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP----ILLEVDQIYHLACPA  191 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~vD~Vih~A~~~  191 (335)
                      ||+|||||||||||++|+++|+++| .++++++.........     ...++++.+|+.++    .+.++|+|||+|+..
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~   74 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAADDIKDYLKGAEEVWHIAANP   74 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTTSCCHHHHTTCSEEEECCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCChHHHHHHhcCCCEEEECCCCC
Confidence            5789999999999999999999999 5566655433222211     34678888888763    456899999999865


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      .......++...+++|+.|+.+++++|++.++ +||++||..+|+.....+.+|+     .+..+.+.|+.+|..+|.++
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A           75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED-----YPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHH
T ss_pred             ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHH
Confidence            44445668899999999999999999999887 8999999999998877788887     56777899999999999999


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhC-CCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRR-QPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~-~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.++.+++++++++||++||||+.   ...++..++..+..+ .++.++++++..++|+|++|+|+
T Consensus       150 ~~~~~~~g~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  212 (313)
T 3ehe_A          150 ESYCHTFDMQAWIYRFANVIGRRS---THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVD  212 (313)
T ss_dssp             HHHHHHTTCEEEEEECSCEESTTC---CCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHH
T ss_pred             HHHHHhcCCCEEEEeeccccCcCC---CcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHH
Confidence            999998999999999999999975   346778888888777 56778899999999999999974

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.7e-33  Score=262.79  Aligned_cols=217  Identities=24%  Similarity=0.415  Sum_probs=179.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEecccc-ch-----hccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EP-----ILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~-----~~~~vD~Vih  186 (335)
                      .++|+|||||||||||++|+++|+++ |++|++++|+......    ......++++.+|+. +.     ++.++|+|||
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD----LVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGG----GGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhh----hccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            46789999999999999999999998 9999999997543322    122368899999998 54     4567999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC-CCCC-CCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNPI-GERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~-~~~~-~~~~~Y~~sK~  264 (335)
                      +||.........++...+++|+.++.+++++|++.+.+|||+||..+|+.....+..|+.+.. ..|. .+.+.|+.+|.
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~  177 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQ  177 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHH
Confidence            998755444456778899999999999999999988899999999999987777777764321 1121 45568999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC------CCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCL------DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~------~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++.+ +++++++||++||||+...      ....++..++..+.++.++.++++++..++|+|++|+|+
T Consensus       178 ~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  253 (372)
T 3slg_A          178 LMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS  253 (372)
T ss_dssp             HHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHH
Confidence            999999999887 9999999999999998532      135588899999999999999999999999999999974

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.7e-32  Score=254.77  Aligned_cols=213  Identities=26%  Similarity=0.397  Sum_probs=174.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      ||+|||||||||||++|+++|+++  |++|++++|............+....++++.+|+.++     ++.++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999999  8999999996532221111222235788999999875     467899999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCC------------CCCCCCcCCCCCCCCCC
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE------------HPQKETYWGNVNPIGER  256 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~------------~~~~E~~~~~~~~~~~~  256 (335)
                      |.........++...+++|+.|+.+++++|.+.+++||++||..+|+....            .+.+|+     .+..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-----~~~~~~  158 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-----TNYNPS  158 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-----SCCCCC
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-----CCCCCC
Confidence            864422233467889999999999999999998889999999999986532            455665     456677


Q ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.|+.+|..+|.+++.++.+.+++++++||++||||+..  ...+++.++..+.++.++.++++++..++|+|++|+|+
T Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  235 (348)
T 1oc2_A          159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH--IEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHST  235 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC--TTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCC--ccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHH
Confidence            899999999999999998888999999999999999852  24677888888889988888899999999999999973

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=9.1e-33  Score=257.41  Aligned_cols=217  Identities=28%  Similarity=0.398  Sum_probs=178.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccC---CCceEEEeccccch-----hccCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFR---NPRFELIRHDVVEP-----ILLEVD  182 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~---~~~~~~~~~D~~~~-----~~~~vD  182 (335)
                      .++|+|||||||||||++|+++|+++|++|++++|......+.+.   ..+.   ...++++.+|+.+.     ++.++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            467899999999999999999999999999999997543222111   1111   24688899998764     457899


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      +|||+||.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+.+.|+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~-----~~~~~~~~Y~~  179 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYAV  179 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC-----CCCCCCChhHH
Confidence            99999986433223356788999999999999999999887 8999999999998766677887     45567789999


Q ss_pred             HHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       262 sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|..+|.+++.++.+.+++++++||++||||+....  ...+++.++..+.++.++.++++++..++|+|++|+|+
T Consensus       180 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (352)
T 1sb8_A          180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  255 (352)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHH
Confidence            999999999999888899999999999999986332  23577888888889998888899999999999999973

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.9e-32  Score=252.05  Aligned_cols=213  Identities=30%  Similarity=0.514  Sum_probs=171.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCC-CccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      +|+|||||||||||++|+++|+++|  ++|++++|.... ..+.+........++++.+|+.+.     ++.++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            5789999999999999999999997  899999986422 122222221235788999999875     45689999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      ||.........++...+++|+.|+.+++++|.+.+.  +||++||..+|+.....+.+|+     .+..+.+.|+.+|..
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~  157 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAA  157 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTT-----BCCCCCSHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCC-----CCCCCCCccHHHHHH
Confidence            986432223346788999999999999999998763  8999999999987766677777     456677899999999


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|.+++.++.+.+++++++||++||||+..  ...+++.++..+.++.++.++++++..++|+|++|+|+
T Consensus       158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (336)
T 2hun_A          158 SDMLVLGWTRTYNLNASITRCTNNYGPYQF--PEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR  225 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECEEESTTCC--TTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeeeeeCcCCC--cCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence            999999999888999999999999999852  24577888888888888888899999999999999873

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=2.7e-32  Score=255.28  Aligned_cols=214  Identities=26%  Similarity=0.400  Sum_probs=177.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHh--CCCeEEEEecCCCCCc------cc--cccccCCCceEEEeccccch-----
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLID--RGDEVIVIDNFFTGRK------DN--LVHHFRNPRFELIRHDVVEP-----  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~--~g~~V~~~~r~~~~~~------~~--~~~~~~~~~~~~~~~D~~~~-----  176 (335)
                      +..++|+|||||||||||++|+++|++  .|++|++++|......      +.  .........+.++.+|+.++     
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            346788999999999999999999999  9999999999754110      00  11112334678999999875     


Q ss_pred             h-ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          177 I-LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       177 ~-~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      + ..++|+|||+||....  ...++...+++|+.|+.+++++|++.+++||++||..+|+.... +.+|+     .+..+
T Consensus        86 ~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~-----~~~~p  157 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVG-----KNESP  157 (362)
T ss_dssp             HTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTT-----SCCCC
T ss_pred             hhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCC-----CCCCC
Confidence            3 5789999999985332  45678899999999999999999999889999999999998766 77787     56778


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCCeEEecCCCceeeceecccc
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL  333 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dv  333 (335)
                      .+.|+.+|.++|.+++.++.+  ++++++||+++|||+.....  ..++..++..+..+.++.++++++..++|+|++|+
T Consensus       158 ~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  235 (362)
T 3sxp_A          158 ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDV  235 (362)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHH
Confidence            899999999999999998765  89999999999999864321  26788899999999888888999999999999999


Q ss_pred             cC
Q 019794          334 VH  335 (335)
Q Consensus       334 a~  335 (335)
                      |+
T Consensus       236 a~  237 (362)
T 3sxp_A          236 IQ  237 (362)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=5e-32  Score=250.74  Aligned_cols=212  Identities=32%  Similarity=0.523  Sum_probs=174.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC---C---CeEEEEecCCCCC-ccccccccCCCceEEEeccccch-----hccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR---G---DEVIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~---g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~V  184 (335)
                      |+|||||||||||++|+++|+++   |   ++|++++|..... ...+.......+++++.+|+.++     ++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            58999999999999999999997   8   9999999865321 12222221235788999999775     45789999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHH
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      ||+||.........++...+++|+.++.+++++|.+.++ +||++||..+|+.....+.+|+     .+..+.+.|+.+|
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCC-----CCCCCCCchHHHH
Confidence            999986443223346778999999999999999999987 9999999999987665667776     4666778999999


Q ss_pred             HHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       264 ~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..+|.+++.++.+.+++++++||+++|||+..  ...+++.++..+..+.++.++++++..++|+|++|+|+
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQH--PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCC--TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCC--CCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHH
Confidence            99999999998888999999999999999853  24677888888888888888899999999999999873

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.6e-32  Score=248.32  Aligned_cols=209  Identities=33%  Similarity=0.556  Sum_probs=170.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~  189 (335)
                      |+||||||+||||++++++|+++|++|++++|........+     ...++++.+|+.++     .+.  ++|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            58999999999999999999999999999988543222211     13567888998775     344  7999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecc-cccCC-CCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS-EVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~-~v~~~-~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      .........++...+++|+.|+.+++++|++.++ +||++||. .+|+. ....+.+|+     .+..+.+.|+.+|.++
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~  150 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEET-----WPPRPKSPYAASKAAF  150 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCC-----CCCCCCChHHHHHHHH
Confidence            6443223456788999999999999999999886 89999998 89986 444566676     4556678999999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCCCeEEe-----cCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQPMTVY-----GDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~~~~~~-----g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.++++.+++++++||+++|||+..... ..+++.++..+.++.++.++     ++++..++|+|++|+|+
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            99999998888999999999999999864322 45778888888888888888     88889999999999973

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=7.7e-32  Score=247.66  Aligned_cols=207  Identities=30%  Similarity=0.443  Sum_probs=169.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC--CCEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE--VDQIY  185 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~Vi  185 (335)
                      ..++|+|||||||||||++|+++|+++|++|++++|+... ..     +   .++++.+|+.++     ++.+  +|+||
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----P---NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----T---TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----c---eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            4567899999999999999999999999999999997553 11     1   678899999775     3333  99999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccccCCC--CCCCCCCCcCCCCCCCCCCChHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDP--LEHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~~~~--~~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      |+||.........++...+++|+.|+.+++++|++. ++ +||++||..+|+..  ...+.+|+     .+..+.+.|+.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-----~~~~~~~~Y~~  154 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPYGV  154 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-----SCCBCCSHHHH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-----CCCCCCCccHH
Confidence            999865433334578889999999999999999876 44 99999999999876  56677777     45667789999


Q ss_pred             HHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHh---C--CCeEEecCCCceeeceecccccC
Q 019794          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIR---R--QPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       262 sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~---~--~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|+++|.+++.++.+.|++++++||+++|||+...  ..+++.++..+.+   +  .++..+++++..++|+|++|+|+
T Consensus       155 sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~  231 (321)
T 2pk3_A          155 SKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQ  231 (321)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC--CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHH
Confidence            99999999999988889999999999999998532  4466777777766   6  57778899999999999999974

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.6e-32  Score=255.02  Aligned_cols=207  Identities=27%  Similarity=0.340  Sum_probs=170.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ....++|+|||||||||||++|+++|+++|++|++++|....           ..++++.+|+.+.     .+.++|+||
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVL   82 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEE
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEE
Confidence            445678899999999999999999999999999999997543           3567888888765     467899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCC--CCCCCCCCCcCCCCCCCCCCChHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD--PLEHPQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~--~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      |+|+.....  ...+...+++|+.++.+++++|++.++ +|||+||..+|+.  ....+.+|+     .+..+.+.|+.+
T Consensus        83 h~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-----~~~~~~~~Y~~s  155 (347)
T 4id9_A           83 HLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-----HPLCPNSPYGLT  155 (347)
T ss_dssp             ECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-----SCCCCCSHHHHH
T ss_pred             ECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-----CCCCCCChHHHH
Confidence            999864432  234578999999999999999999987 8999999999998  456677777     566778999999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCcee-------------CCCCCCC---------CcchHHHHHHHHHhCCCeEEecC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTY-------------GPRMCLD---------DGRVVSNFVAQAIRRQPMTVYGD  320 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~-------------Gp~~~~~---------~~~~i~~~~~~~~~~~~~~~~g~  320 (335)
                      |..+|.+++.++.+.+++++++||+++|             ||+....         ...++..++..+..+.++.++++
T Consensus       156 K~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  235 (347)
T 4id9_A          156 KLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILAR  235 (347)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCC
Confidence            9999999999998889999999999999             7763221         14677788888888999899999


Q ss_pred             CCceeec----eecccccC
Q 019794          321 GKQTRSF----QYVSDLVH  335 (335)
Q Consensus       321 g~~~~~~----v~v~Dva~  335 (335)
                      ++..++|    +|++|+|+
T Consensus       236 ~~~~~~~~~~~i~v~Dva~  254 (347)
T 4id9_A          236 NENGRPFRMHITDTRDMVA  254 (347)
T ss_dssp             CTTCCBCEECEEEHHHHHH
T ss_pred             CCcccCCccCcEeHHHHHH
Confidence            9999999    99999974

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3e-32  Score=256.47  Aligned_cols=218  Identities=25%  Similarity=0.379  Sum_probs=168.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      ..++|+|||||||||||++|+++|+++| ++|++++|........+.   ....++++.+|+.++     ++.++|+|||
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih  105 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFH  105 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence            3567899999999999999999999999 999999997554322221   235788999998775     4568999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCCCCCCC--CCcCCCCCCC-CCCChHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVYGDPLEHPQK--ETYWGNVNPI-GERSCYDE  261 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~~~~~~~~~~--E~~~~~~~~~-~~~~~Y~~  261 (335)
                      +||.........++...+++|+.++.+++++|++. ++ +||++||..+|+.....+.+  |+.|.  .+. .+.+.|+.
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~--~~~~~~~~~Y~~  183 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDI--VSLHNNDSPYSM  183 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCC--CCSSCCCSHHHH
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccc--ccccCCCCchHH
Confidence            99864432233467889999999999999999998 76 89999999999877665667  77442  144 56789999


Q ss_pred             HHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC---------CCC--CcchHHHHHHHHHhCCCeEEecCCCceeeceec
Q 019794          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM---------CLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYV  330 (335)
Q Consensus       262 sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~---------~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v  330 (335)
                      +|..+|.+++.++.+.+++++++||++|||++.         ...  ...+++.++..+.++.++.++++++..++|+|+
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v  263 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV  263 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH
Confidence            999999999999888899999999999999975         110  045788888889999888888899999999999


Q ss_pred             ccccC
Q 019794          331 SDLVH  335 (335)
Q Consensus       331 ~Dva~  335 (335)
                      +|+|+
T Consensus       264 ~Dva~  268 (377)
T 2q1s_A          264 EDVAN  268 (377)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99974

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2.1e-31  Score=250.92  Aligned_cols=216  Identities=26%  Similarity=0.382  Sum_probs=174.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      ...+||+|||||||||||++|+++|+++|++|++++|+.......     ....++++.+|+.+.     ++.++|+|||
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            344678999999999999999999999999999999975432211     124678889998764     4678999999


Q ss_pred             ccCCCCCCCc-cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-----CCCCCCcCCCCCCCCCCChH
Q 019794          187 LACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE-----HPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       187 ~A~~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~-----~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +|+......+ ..++...+++|+.++.+++++|++.++ +||++||..+|+....     .+.+|+.+.   +..+.+.|
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~---~~~~~~~Y  176 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW---PAEPQDAF  176 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS---SBCCSSHH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC---CCCCCChh
Confidence            9986443222 457888999999999999999999887 9999999999986432     235555321   44566899


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.+|..+|.+++.++.+.+++++++||+++|||+.....  ..++..++..+.++.+ +.++++++..++|+|++|+|+
T Consensus       177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  255 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHH
Confidence            999999999999998888999999999999999754322  2377888888888876 888899999999999999973

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-31  Score=248.75  Aligned_cols=216  Identities=25%  Similarity=0.422  Sum_probs=172.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch-----hcc--CCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-----ILL--EVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~--~vD~Vi  185 (335)
                      ++|+|||||||||||++++++|+++|++|++++|+...........  .....+.++.+|+.++     .+.  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4579999999999999999999999999999999765443322111  1134678899999875     233  799999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      |+||.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+.+.|+.+|.
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDET-----FPLSATNPYGQTKL  158 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTT-----SCCBCSSHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCC-----CCCCCCChhHHHHH
Confidence            99987554444556778999999999999999999886 8999999999998877788888     56677889999999


Q ss_pred             HHHHHHHHHHhhhC-CcEEEEEeCceeCCCCCC----C----CcchHHHHHHHHHhC-CCeEEec------CCCceeece
Q 019794          265 TAETLTMDYHRGAG-VEVRIARIFNTYGPRMCL----D----DGRVVSNFVAQAIRR-QPMTVYG------DGKQTRSFQ  328 (335)
Q Consensus       265 ~~E~l~~~~a~~~~-i~~~ivRp~~v~Gp~~~~----~----~~~~i~~~~~~~~~~-~~~~~~g------~g~~~~~~v  328 (335)
                      ++|.+++.++.+.+ ++++++||+++|||+...    .    ...+++.+......+ .++.++|      ++++.++|+
T Consensus       159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            99999999988875 999999999999996421    1    144555444444433 5677777      889999999


Q ss_pred             ecccccC
Q 019794          329 YVSDLVH  335 (335)
Q Consensus       329 ~v~Dva~  335 (335)
                      |++|+|+
T Consensus       239 ~v~Dva~  245 (341)
T 3enk_A          239 HVVDLAR  245 (341)
T ss_dssp             EHHHHHH
T ss_pred             EHHHHHH
Confidence            9999974

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.98  E-value=1.5e-31  Score=246.59  Aligned_cols=210  Identities=27%  Similarity=0.447  Sum_probs=168.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A  188 (335)
                      ||+|||||||||||++++++|+++|++|++++|......+.+    . ..++++.+|+.+.     .+.  ++|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI----T-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS----C-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc----C-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            579999999999999999999999999999998654332211    1 2678899998775     344  899999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      |.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+.+.|+.+|..+|
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e  150 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEE-----TMTNPTNTYGETKLAIE  150 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCSSHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcC-----CCCCCCChHHHHHHHHH
Confidence            86433223346788999999999999999999886 8999999999998776778887     45567789999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCC-------CCcchHHHHHHHHHh-CCCeEEec------CCCceeeceecccc
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCL-------DDGRVVSNFVAQAIR-RQPMTVYG------DGKQTRSFQYVSDL  333 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~-------~~~~~i~~~~~~~~~-~~~~~~~g------~g~~~~~~v~v~Dv  333 (335)
                      .+++.++.+.+++++++||+++||++...       ....+++.++..+.. +..+.+++      +++..++|+|++|+
T Consensus       151 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv  230 (330)
T 2c20_A          151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL  230 (330)
T ss_dssp             HHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHH
Confidence            99999988889999999999999996321       123466666655543 34577776      67889999999999


Q ss_pred             cC
Q 019794          334 VH  335 (335)
Q Consensus       334 a~  335 (335)
                      |+
T Consensus       231 a~  232 (330)
T 2c20_A          231 VA  232 (330)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.98  E-value=1.7e-31  Score=247.52  Aligned_cols=215  Identities=24%  Similarity=0.434  Sum_probs=173.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A~  189 (335)
                      |+|||||||||||++++++|+++ |++|++++|+......    ......++++.+|+.+.      .+.++|+|||+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            58999999999999999999998 8999999997543221    12335788999999762      3457999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC-CCCC-CCCChHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNPI-GERSCYDEGKRTAE  267 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~-~~~~-~~~~~Y~~sK~~~E  267 (335)
                      ...+.....++...+++|+.++.+++++|++.+.+||++||..+|+.....+.+|+.+.. ..+. .+.+.|+.+|..+|
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e  156 (345)
T 2bll_A           77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (345)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             ccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHH
Confidence            654333345677899999999999999999888899999999999987666677775421 1111 34568999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCC------CCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCL------DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~------~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+++.++++.+++++++||++||||+...      ....++..++..+.++.++.++++++..++|+|++|+|+
T Consensus       157 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  230 (345)
T 2bll_A          157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHH
Confidence            99999988889999999999999998532      113467888888899999888899999999999999973

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.98  E-value=7.7e-32  Score=250.03  Aligned_cols=220  Identities=29%  Similarity=0.442  Sum_probs=167.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-ccccccCCCceEEEeccccch-----hccC--CCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-NLVHHFRNPRFELIRHDVVEP-----ILLE--VDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~Vih~  187 (335)
                      ||+|||||||||||++|+++|+++|++|++++|....... .........+++++.+|+.++     ++.+  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            4799999999999999999999999999999985422211 111111224588899999775     3455  9999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCC--cC---------CCCCCCC
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKET--YW---------GNVNPIG  254 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~--~~---------~~~~~~~  254 (335)
                      ||.........++...+++|+.|+.+++++|++.++  +||++||..+|+.....+..|+  .|         ....+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            986432222346788999999999999999998875  7999999999987544332221  01         0113455


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-CcchHHHHHHHHHhCC-----CeEEecCCCceeece
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQAIRRQ-----PMTVYGDGKQTRSFQ  328 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-~~~~i~~~~~~~~~~~-----~~~~~g~g~~~~~~v  328 (335)
                      +.+.|+.+|+.+|.+++.++.+.+++++++||++|||++.... ...++..++..+..+.     ++..++++++.++|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            6789999999999999999888899999999999999975322 2346777777777665     788889999999999


Q ss_pred             ecccccC
Q 019794          329 YVSDLVH  335 (335)
Q Consensus       329 ~v~Dva~  335 (335)
                      |++|+|+
T Consensus       241 ~v~Dva~  247 (347)
T 1orr_A          241 HAEDMIS  247 (347)
T ss_dssp             EHHHHHH
T ss_pred             EHHHHHH
Confidence            9999974

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.98  E-value=2e-31  Score=246.27  Aligned_cols=216  Identities=21%  Similarity=0.267  Sum_probs=170.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      .+|+|||||||||||++|+++|+++|++|++++|+...........+ ....++++.+|+.+.     .+.  ++|+|||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            46799999999999999999999999999999997654221111111 234688899999775     233  4799999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC--CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      +||.........++...+++|+.++.+++++|++.+  .+||++||..+|+.....+.+|+     .+..+.+.|+.+|.
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~  167 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKL  167 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHH
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcc-----cCCCCCChhHHHHH
Confidence            998644332345788899999999999999999887  38999999999998776677887     45667789999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++.+++++++++||+++|||+..... ...+..++..+..+.. ...+++++..++|+|++|+|+
T Consensus       168 ~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          168 YGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            9999999998888999999999999999753211 1235566667777763 455689999999999999973

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.98  E-value=6.5e-32  Score=255.89  Aligned_cols=222  Identities=26%  Similarity=0.327  Sum_probs=169.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc----------------cccc--ccCCCceEEEecccc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD----------------NLVH--HFRNPRFELIRHDVV  174 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~----------------~~~~--~~~~~~~~~~~~D~~  174 (335)
                      ..++++|||||||||||++|+++|+++|++|++++|.......                .+..  ......++++.+|+.
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            4578899999999999999999999999999999885322100                0000  011346788999998


Q ss_pred             ch-----hccC--CCEEEEccCCCCCCCccCCh---hhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCC
Q 019794          175 EP-----ILLE--VDQIYHLACPASPVHYKYNP---VKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       175 ~~-----~~~~--vD~Vih~A~~~~~~~~~~~~---~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~  242 (335)
                      ++     ++.+  +|+|||+||.........++   ...+++|+.|+.+++++|++.+.  +||++||..+|+... .+.
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~  166 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDI  166 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCB
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCC
Confidence            75     3444  99999999865432222333   34789999999999999998873  899999999998754 455


Q ss_pred             CCCcCCCC---------CCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC------------C---
Q 019794          243 KETYWGNV---------NPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD------------D---  298 (335)
Q Consensus       243 ~E~~~~~~---------~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~------------~---  298 (335)
                      +|+.|...         .+..+.+.|+.+|+++|.+++.++.+++++++++||++||||+....            .   
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  246 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF  246 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccch
Confidence            66544211         24556789999999999999999888899999999999999975320            0   


Q ss_pred             cchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       299 ~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..++..++..+..++++.+++++++.++|+||+|+|+
T Consensus       247 ~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~  283 (404)
T 1i24_A          247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ  283 (404)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHH
Confidence            3578889999999999888899999999999999974

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.98  E-value=1.1e-31  Score=245.29  Aligned_cols=206  Identities=24%  Similarity=0.322  Sum_probs=163.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC--CCEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE--VDQIY  185 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~Vi  185 (335)
                      ..++|+|||||||||||++|+++|+++|+      +.   . .      ....++.+.+|+.++     .+.+  +|+||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~---~-~------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LP---G-E------DWVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT---T-C------EEEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cc---c-c------cccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            35788999999999999999999999998      10   0 0      001223345666554     3444  99999


Q ss_pred             EccCCCCC-CCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC-hHHHH
Q 019794          186 HLACPASP-VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS-CYDEG  262 (335)
Q Consensus       186 h~A~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~-~Y~~s  262 (335)
                      |+|+.... .....++...+++|+.|+.+++++|++.++ +|||+||..+|+.....+.+|+.+... +..+.+ .|+.+
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~~~p~~~~Y~~s  145 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG-PPHNSNFGYSYA  145 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS-CCCSSSHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC-CCCCCcchHHHH
Confidence            99986432 123457788999999999999999999997 899999999999888888888854322 333444 69999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHH----HHhCCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQ----AIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~----~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|.+++.++++.+++++++||+++|||+....  ...+++.++..    +..+.++.++++++..++|+|++|+|+
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  224 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQ  224 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHH
Confidence            99999999999988999999999999999986432  24577777777    788999999999999999999999974

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.98  E-value=2.7e-31  Score=247.85  Aligned_cols=215  Identities=22%  Similarity=0.250  Sum_probs=170.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      .++|+||||||+||||++|+++|+++|++|++++|+................++++.+|+.++     .+.  ++|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            356899999999999999999999999999999997654322111111134678899999875     233  3899999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCC-CCCCCCcCCCCCCCCCCChHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      +||.........++...+++|+.|+.+++++|++.+ + +||++||..+|+.... .+..|+     .+..+.+.|+.+|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-----~~~~~~~~Y~~sK  161 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSK  161 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-----CCCCCCCccHHHH
Confidence            998533222345677899999999999999999876 5 8999999999987543 355565     4556678999999


Q ss_pred             HHHHHHHHHHHhhh---------CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          264 RTAETLTMDYHRGA---------GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       264 ~~~E~l~~~~a~~~---------~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ..+|.+++.++.++         +++++++||++||||+... ...++..++..+.++.++.+ ++++..++|+|++|+|
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~-~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva  239 (357)
T 1rkx_A          162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL  239 (357)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc-cccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence            99999999988765         9999999999999997532 24688889998888887765 5677899999999987


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       240 ~  240 (357)
T 1rkx_A          240 S  240 (357)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.98  E-value=5.4e-31  Score=245.87  Aligned_cols=212  Identities=29%  Similarity=0.509  Sum_probs=170.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCC-CccccccccCCCceEEEeccccch-----hcc--CCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~  187 (335)
                      |+||||||+||||++|+++|++. |++|++++|.... ..+.+........++++.+|+.+.     ++.  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            57999999999999999999998 7999999986521 222222221235788999999875     344  89999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc--CC--------eEEEEecccccCCCCC--C--------CCCCCcC
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV--GA--------KFLLTSTSEVYGDPLE--H--------PQKETYW  247 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~--------r~v~iSS~~v~~~~~~--~--------~~~E~~~  247 (335)
                      ||.........++...+++|+.|+.+++++|.+.  ++        +||++||..+|+....  .        +.+|+  
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~--  158 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET--  158 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT--
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC--
Confidence            9864422233567889999999999999999887  63        8999999999986532  1        45565  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeec
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSF  327 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~  327 (335)
                         .+..+.+.|+.+|..+|.+++.++.+.+++++++||++||||+..  ...++..++..+.++.++.++++++..++|
T Consensus       159 ---~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (361)
T 1kew_A          159 ---TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF--PEKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (361)
T ss_dssp             ---SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC--TTSHHHHHHHHHHHTCCEEEETTSCCEEEE
T ss_pred             ---CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCC--cccHHHHHHHHHHcCCCceEcCCCceeEee
Confidence               456677899999999999999999888999999999999999852  245778888888888888888999999999


Q ss_pred             eecccccC
Q 019794          328 QYVSDLVH  335 (335)
Q Consensus       328 v~v~Dva~  335 (335)
                      +|++|+|+
T Consensus       234 i~v~Dva~  241 (361)
T 1kew_A          234 LYVEDHAR  241 (361)
T ss_dssp             EEHHHHHH
T ss_pred             EEHHHHHH
Confidence            99999973

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=4.7e-31  Score=245.13  Aligned_cols=215  Identities=27%  Similarity=0.473  Sum_probs=168.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC------Cccccccc--cCCCceEEEeccccch-----hcc--C
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG------RKDNLVHH--FRNPRFELIRHDVVEP-----ILL--E  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~------~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~--~  180 (335)
                      +|+|||||||||||++|+++|+++|++|++++|....      ..+.....  .....++++.+|+.+.     ++.  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5799999999999999999999999999999986543      11111110  0124678899999875     344  7


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CCh
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSC  258 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~  258 (335)
                      +|+|||+||.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+ .+.
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~-----~~~~p~~~~  156 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA-----HPTGGCTNP  156 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSSH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCC-----CCCCCCCCc
Confidence            9999999986443323456788999999999999999999886 8999999999998777777887     34445 689


Q ss_pred             HHHHHHHHHHHHHHHHhh-hCCcEEEEEeCceeCCCCC----CC----CcchHHHHHHHHH-hCCCeEEec------CCC
Q 019794          259 YDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMC----LD----DGRVVSNFVAQAI-RRQPMTVYG------DGK  322 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~-~~i~~~ivRp~~v~Gp~~~----~~----~~~~i~~~~~~~~-~~~~~~~~g------~g~  322 (335)
                      |+.+|..+|.+++.++.+ .+++++++||+++|||+..    ..    ...+++.++..+. .+.++.+++      +++
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  236 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCc
Confidence            999999999999999877 2399999999999999521    11    2457777777766 567788877      678


Q ss_pred             ceeeceecccccC
Q 019794          323 QTRSFQYVSDLVH  335 (335)
Q Consensus       323 ~~~~~v~v~Dva~  335 (335)
                      ..++|+|++|+|+
T Consensus       237 ~~~~~i~v~Dva~  249 (348)
T 1ek6_A          237 GVRDYIHVVDLAK  249 (348)
T ss_dssp             CEECEEEHHHHHH
T ss_pred             eEEeeEEHHHHHH
Confidence            8999999999973

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=1.1e-30  Score=243.91  Aligned_cols=209  Identities=23%  Similarity=0.348  Sum_probs=166.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhcc-----CCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL-----EVD  182 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~-----~vD  182 (335)
                      .++|+|||||||||||++|+++|+++| ++|++++|.......  . .+.  .+. +.+|+.+     ..+.     ++|
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~-~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--V-NLV--DLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG--G-GTT--TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh--h-ccc--Cce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            456799999999999999999999999 899999987543211  1 111  111 4445543     3343     599


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      +|||+||....  ...++...+++|+.++.+++++|++.+++||++||..+|+.....+.+|+     .+..+.+.|+.+
T Consensus       118 ~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~s  190 (357)
T 2x6t_A          118 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVFGYS  190 (357)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSG-----GGCCCSSHHHHH
T ss_pred             EEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCc-----CCCCCCChhHHH
Confidence            99999986543  34578889999999999999999988779999999999988766677777     456677899999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCc-eeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQ-TRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~-~~~~v~v~Dva~  335 (335)
                      |..+|.+++.++.+.+++++++||++||||+....  ...++..++..+.++.++.++++++. .++|+|++|+|+
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  266 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  266 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHH
Confidence            99999999999888899999999999999975321  13577888888888888888899888 999999999974

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=5.8e-31  Score=248.91  Aligned_cols=215  Identities=25%  Similarity=0.417  Sum_probs=166.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCCCC--------cccccc---cc-C---CCc---eEEEeccccch
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGR--------KDNLVH---HF-R---NPR---FELIRHDVVEP  176 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll-~~g~~V~~~~r~~~~~--------~~~~~~---~~-~---~~~---~~~~~~D~~~~  176 (335)
                      +|+||||||+||||++|+++|+ ++|++|++++|.....        ...+..   .+ .   ...   ++++.+|+.++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 9999999999875432        111100   00 0   123   88899999875


Q ss_pred             -----hcc--C-CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-------CC
Q 019794          177 -----ILL--E-VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL-------EH  240 (335)
Q Consensus       177 -----~~~--~-vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~-------~~  240 (335)
                           ++.  + +|+|||+||.........++...+++|+.++.+++++|++.++ +||++||..+|+...       ..
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence                 333  5 9999999986543223456788999999999999999999887 899999999998765       45


Q ss_pred             CCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC-------CCcchHHHHH----HHH
Q 019794          241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL-------DDGRVVSNFV----AQA  309 (335)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~-------~~~~~i~~~~----~~~  309 (335)
                      +.+|+     .+..+.+.|+.+|+++|.+++.++.+++++++++||++||||+...       ....+++.++    ..+
T Consensus       162 ~~~E~-----~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  236 (397)
T 1gy8_A          162 PIDIN-----AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (397)
T ss_dssp             CBCTT-----SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             CcCcc-----CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence            67777     4556678999999999999999998889999999999999997421       1245666555    233


Q ss_pred             HhCC------------CeEEec------CCCceeeceecccccC
Q 019794          310 IRRQ------------PMTVYG------DGKQTRSFQYVSDLVH  335 (335)
Q Consensus       310 ~~~~------------~~~~~g------~g~~~~~~v~v~Dva~  335 (335)
                      ..+.            ++.+++      +++..++|+||+|+|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~  280 (397)
T 1gy8_A          237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLAS  280 (397)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred             HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHH
Confidence            3443            577777      7888999999999973

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-30  Score=237.94  Aligned_cols=205  Identities=24%  Similarity=0.352  Sum_probs=154.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhcc-----CCCEEEE
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL-----EVDQIYH  186 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~-----~vD~Vih  186 (335)
                      +|||||||||||++|+++|+++| ++|++++|............     +. +.+|+.+     ..+.     ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-----~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-----LN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-----SC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCc-----ce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            58999999999999999999999 89999998754321110111     11 3444443     3444     4999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      +||....  ...++...+++|+.++.+++++|++.+++||++||..+|+.....+.+|+     .+..+.+.|+.+|..+
T Consensus        75 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           75 EGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             CCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHH
T ss_pred             CcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHH
Confidence            9986543  44578889999999999999999988889999999999998766677777     4556778999999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCc-eeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQ-TRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~-~~~~v~v~Dva~  335 (335)
                      |.+++.++.+.+++++++||+++|||+....  ...++..++..+.+++++.++++++. .++|+|++|+|+
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            9999999888899999999999999975321  13577888888888888887888888 999999999973

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=4.4e-30  Score=241.24  Aligned_cols=214  Identities=27%  Similarity=0.299  Sum_probs=167.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-cccccc------CCCceEEEeccccch-----hcc--CCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-NLVHHF------RNPRFELIRHDVVEP-----ILL--EVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~------~~~~~~~~~~D~~~~-----~~~--~vD  182 (335)
                      |+||||||+||||++|+++|+++|++|++++|+...... .+....      ....++++.+|+.++     .+.  ++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            789999999999999999999999999999997653211 111110      234688899999775     233  479


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC----CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      +|||+||.........++...+++|+.++.+++++|.+.+    .+||++||..+|+.....+.+|+     .+..+.+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~~~~~~  179 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSP  179 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCCSH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-----CCCCCCCh
Confidence            9999998644322345678899999999999999999887    48999999999987766677777     45566789


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCC-CeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~-~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|+.+|.+++.++.+++++++++||+++|||+..... ...+..++..+..+. ....+++++..++|+|++|+|+
T Consensus       180 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  258 (375)
T 1t2a_A          180 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  258 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence            9999999999999999888999999999999999753211 123455666666765 4456689999999999999973

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=9.2e-31  Score=239.40  Aligned_cols=207  Identities=20%  Similarity=0.251  Sum_probs=162.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      +|+|||||||||||++|+++|+++  |++|++++|+.....  ..     ..++++.+|+.+.     .+.  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VV-----NSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--cc-----CCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            578999999999999999999999  899999998754321  11     2456788898764     344  8999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-CCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      +||.... ....++...+++|+.++.+++++|++.++ +||++||..+|+.... .+.+|+     .+..+.+.|+.+|.
T Consensus        75 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~Y~~sK~  148 (312)
T 2yy7_A           75 MAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY-----TIMEPSTVYGISKQ  148 (312)
T ss_dssp             CCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSS-----CBCCCCSHHHHHHH
T ss_pred             CCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCcccc-----CcCCCCchhHHHHH
Confidence            9986432 12346788999999999999999999887 9999999999987543 355565     45567789999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCc--chHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~--~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++.+.+++++++||+++||++..+...  ..+..++.....++++..+++++..++|+|++|+|+
T Consensus       149 ~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  221 (312)
T 2yy7_A          149 AGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAID  221 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHH
Confidence            99999999988889999999999999986533221  223333344455566777788889999999999973

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=8.2e-30  Score=238.83  Aligned_cols=215  Identities=29%  Similarity=0.367  Sum_probs=166.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccccc-----CCCceEEEeccccch-----hcc--CCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF-----RNPRFELIRHDVVEP-----ILL--EVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~-----~~~--~vD  182 (335)
                      ||+||||||+||||++++++|+++|++|++++|+..... ..+....     ....++++.+|+.+.     .+.  ++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999754321 1111111     124678889999775     233  479


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC----CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      +|||+||.........++...+++|+.++.+++++|++.+    .+||++||..+|+.....+.+|+     .+..+.+.
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-----~~~~~~~~  155 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  155 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-----CCCCCCCh
Confidence            9999999755444456778899999999999999999887    48999999999987766677777     45566789


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCC-CeEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~-~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|..+|.+++.++.+++++++++|++++|||+..... ...+..++..+..+. +...+++++..++|+|++|+|+
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence            9999999999999999888999999999999999753211 133555666666675 3556689999999999999873

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=5.1e-30  Score=237.29  Aligned_cols=214  Identities=27%  Similarity=0.504  Sum_probs=162.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch-----hcc--CCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-----ILL--EVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~  187 (335)
                      |+||||||+||||++++++|+++|++|++++|............  .....+.++.+|+.++     ++.  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            58999999999999999999999999999987543322211110  1123577889998875     232  59999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKRT  265 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~~  265 (335)
                      ||.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..+ .+.|+.+|.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~~Y~~sK~~  155 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVES-----FPTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTT-----SCCCCCSSHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcc-----cCCCCCCChHHHHHHH
Confidence            986433223346678899999999999999998886 8999999999987666667776     33333 6799999999


Q ss_pred             HHHHHHHHHhhh-CCcEEEEEeCceeCCCCC------CC--CcchHHHHHHHHH-hCCCeEEec------CCCceeecee
Q 019794          266 AETLTMDYHRGA-GVEVRIARIFNTYGPRMC------LD--DGRVVSNFVAQAI-RRQPMTVYG------DGKQTRSFQY  329 (335)
Q Consensus       266 ~E~l~~~~a~~~-~i~~~ivRp~~v~Gp~~~------~~--~~~~i~~~~~~~~-~~~~~~~~g------~g~~~~~~v~  329 (335)
                      +|.+++.++.+. +++++++||+++||+...      ..  ...+++.+..... .+.++.+++      +|++.++|+|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~  235 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEE
Confidence            999999998876 899999999999998421      11  2345666655555 345566665      5678899999


Q ss_pred             cccccC
Q 019794          330 VSDLVH  335 (335)
Q Consensus       330 v~Dva~  335 (335)
                      ++|+|+
T Consensus       236 v~Dva~  241 (338)
T 1udb_A          236 VMDLAD  241 (338)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999973

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.97  E-value=5.9e-30  Score=237.01  Aligned_cols=201  Identities=12%  Similarity=0.070  Sum_probs=155.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      .+|+|||||||||||++++++|+++|++|++++|+...... +    ....++++.+|+.+.     .+.++|+|||+||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-L----AYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-G----GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-h----ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            34699999999999999999999999999999997543221 1    123678899998774     5678999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC--CCCCCCcCCCCCCCCC----CChHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE--HPQKETYWGNVNPIGE----RSCYDEG  262 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~--~~~~E~~~~~~~~~~~----~~~Y~~s  262 (335)
                      ...  ....++...+++|+.++.+++++|++.++ +||++||..+|+....  .+ +|+     .+..+    .+.|+.+
T Consensus        87 ~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~-----~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           87 YYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEG-----LFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTT-----CCCSSCCTTSCHHHHH
T ss_pred             cCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCC-----CCCCccccccChHHHH
Confidence            543  23356778999999999999999999886 9999999999987554  34 666     44555    7899999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|.+++.++.+ +++++++||+++||++..  ... +..++..+..+....+   ++..++|+|++|+|+
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~--~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~  224 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDI--GPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGR  224 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCS--SCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCc--ccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHH
Confidence            99999999998877 999999999999999751  112 4567777777776654   557889999999974

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=1e-30  Score=240.14  Aligned_cols=205  Identities=23%  Similarity=0.361  Sum_probs=161.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACPASP  193 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~~~~  193 (335)
                      +|+|||||||||||++|+++|+++|++|++++|...              .++.+.+....++.  ++|+|||+|+....
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~--------------~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   68 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   68 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc--------------CCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence            579999999999999999999999999999876421              11111122233455  89999999986432


Q ss_pred             C-CccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHH
Q 019794          194 V-HYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLT  270 (335)
Q Consensus       194 ~-~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~  270 (335)
                      . ....++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+.+... +..+. +.|+.+|..+|.++
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQG-TLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSS-CCCGGGHHHHHHHHHHHHHH
T ss_pred             cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccC-CCCCCCCccHHHHHHHHHHH
Confidence            1 12346788999999999999999999887 999999999999877777888754321 33343 58999999999999


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHh----C-CCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIR----R-QPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~----~-~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.++++.+++++++||+++|||+....  ...+++.++..+.+    + .++.++++++..++|+|++|+|+
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~  219 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA  219 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHH
Confidence            999888899999999999999986422  23677788877765    3 56777899999999999999974

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=2.3e-30  Score=239.42  Aligned_cols=218  Identities=20%  Similarity=0.205  Sum_probs=167.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEE-eccccch-----hccCCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELI-RHDVVEP-----ILLEVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~-~~D~~~~-----~~~~vD~  183 (335)
                      ..++|+||||||+||||++++++|+++|++|++++|+..... .+...+   ....++++ .+|+.+.     ++.++|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            456789999999999999999999999999999998643221 111110   12467777 7888764     4567999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHH-cCC-eEEEEecccccCCCCC----CCCCCCcCCCC-------
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR-VGA-KFLLTSTSEVYGDPLE----HPQKETYWGNV-------  250 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~-r~v~iSS~~v~~~~~~----~~~~E~~~~~~-------  250 (335)
                      |||+||....   ..++...+++|+.|+.+++++|.+ .++ +||++||..+|+....    .+.+|+.|...       
T Consensus        87 vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            9999986432   246788999999999999999985 454 8999999999864322    46677765311       


Q ss_pred             ----CCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCCCCCCCc-chHHHHHHHHHhCCCeEEecCCCc
Q 019794          251 ----NPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG-RVVSNFVAQAIRRQPMTVYGDGKQ  323 (335)
Q Consensus       251 ----~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~~~~~~~-~~i~~~~~~~~~~~~~~~~g~g~~  323 (335)
                          .+..+.+.|+.+|.++|.+++.++.++  +++++++||+++||+....... ..+..++..+.++.+..+++++ .
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-P  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-C
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-C
Confidence                123455789999999999999998775  7899999999999998643322 3788888888888887666665 6


Q ss_pred             eeeceecccccC
Q 019794          324 TRSFQYVSDLVH  335 (335)
Q Consensus       324 ~~~~v~v~Dva~  335 (335)
                      .++|+|++|+|+
T Consensus       243 ~~~~v~v~Dva~  254 (342)
T 1y1p_A          243 PQYYVSAVDIGL  254 (342)
T ss_dssp             SEEEEEHHHHHH
T ss_pred             cCCEeEHHHHHH
Confidence            789999999974

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=8.3e-30  Score=235.99  Aligned_cols=216  Identities=25%  Similarity=0.297  Sum_probs=168.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-ccccccCCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-NLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      ++|+|||||||||||++++++|+++|++|++++|+...... .+........++++.+|+.+.     .+.  ++|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            46799999999999999999999999999999997654321 111111234688899999775     233  4799999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC--CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      +||.........++...+++|+.|+.+++++|.+.+  .+||++||..+||.....+.+|+     .+..+.+.|+.+|.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-----TPFYPRSPYAVAKL  156 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-----CCCCCCChhHHHHH
Confidence            998654322345788899999999999999999887  48999999999998776677777     45667789999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++.+++++++++|+.++|||+..... ...+..++..+..+.. ...+++++..++|+|++|+|+
T Consensus       157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  229 (345)
T 2z1m_A          157 FGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVE  229 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHH
Confidence            9999999999888999999999999999853211 1223445555566653 345688888999999999973

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=1.1e-30  Score=236.38  Aligned_cols=188  Identities=22%  Similarity=0.270  Sum_probs=156.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCCCCCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACPASPVH  195 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~~~~~~  195 (335)
                      +|||||||||||++++++|+++|++|++++|..               .++.+.+.....+.  ++|+|||+||......
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~   71 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQ   71 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhcCCCEEEECCcccChHH
Confidence            899999999999999999999999999998821               11111122223444  6999999998765444


Q ss_pred             ccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 019794          196 YKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHR  275 (335)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~  275 (335)
                      ...++...+++|+.++.+++++|++.++||||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+++.++ 
T Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~~~~-  145 (287)
T 3sc6_A           72 AEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEF-----HNPAPINIYGASKYAGEQFVKELH-  145 (287)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTT-----SCCCCCSHHHHHHHHHHHHHHHHC-
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHHHHhC-
Confidence            45678899999999999999999999999999999999998877888888     566778999999999999998764 


Q ss_pred             hhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          276 GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       276 ~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                         .+++++||+++|||+.    ..++..++..+.++.++.++++  ..++|+|++|+|+
T Consensus       146 ---~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~  196 (287)
T 3sc6_A          146 ---NKYFIVRTSWLYGKYG----NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNV  196 (287)
T ss_dssp             ---SSEEEEEECSEECSSS----CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHH
T ss_pred             ---CCcEEEeeeeecCCCC----CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHH
Confidence               4789999999999974    5678888888888888887665  7899999999974

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=2.6e-29  Score=252.86  Aligned_cols=218  Identities=25%  Similarity=0.435  Sum_probs=176.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih  186 (335)
                      .++|+|||||||||||++++++|+++ |++|++++|+......    ......++++.+|+.+.      .+.++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            46789999999999999999999998 8999999997543221    12245788999998763      3457999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC-CCC-CCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN-VNP-IGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~-~~~-~~~~~~Y~~sK~  264 (335)
                      +||.........++...+++|+.|+.+++++|++.+.+||++||..+|+.....+.+|+.+.. ..| ..+.+.|+.+|+
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            998755433445778899999999999999999888899999999999887666777775321 011 144568999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC------CCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCL------DDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~------~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.++++.+++++++||++|||++...      ....++..++..+.++.++.++++++..++|+|++|+|+
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~  545 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  545 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHH
Confidence            99999999988889999999999999998531      124577888889999999888899999999999999973

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=3.5e-29  Score=231.31  Aligned_cols=202  Identities=27%  Similarity=0.416  Sum_probs=159.6

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQ  183 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~  183 (335)
                      ...+++|+||||||+||||++|+++|+++|++|++++|+......... .+  ..++++.+|+.+.     ++.  ++|+
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-PV--AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-SC--TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-cc--CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            445678899999999999999999999999999999996543321111 11  4688899999775     355  8999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC--CCCCCcCCCCCCCCCCChHH
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH--PQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~--~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      |||+||..... ...++.  +++|+.++.+++++|.+.++ +||++||..+|+.....  +.+|+.       .+.+.|+
T Consensus        92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~-------~~~~~Y~  161 (330)
T 2pzm_A           92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT-------APFTSYG  161 (330)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC-------CCCSHHH
T ss_pred             EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC-------CCCChHH
Confidence            99999865432 222333  89999999999999998887 99999999999865443  666662       4567999


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|+.+|.+++.+    +++++++||+++|||+.   ...++..++..+..+.  ..++++. .++|+|++|+|+
T Consensus       162 ~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~  226 (330)
T 2pzm_A          162 ISKTAGEAFLMMS----DVPVVSLRLANVTGPRL---AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLA  226 (330)
T ss_dssp             HHHHHHHHHHHTC----SSCEEEEEECEEECTTC---CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHc----CCCEEEEeeeeeECcCC---CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHH
Confidence            9999999998774    89999999999999984   3567777777777765  4456777 889999999974

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=4.7e-29  Score=231.20  Aligned_cols=212  Identities=21%  Similarity=0.236  Sum_probs=170.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCC-------CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc-c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG-------DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL-L  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~-~  179 (335)
                      .+++|+||||||+||||++|+++|+++|       ++|++++|.......     .....++++.+|+.++     ++ .
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHhc
Confidence            4577899999999999999999999999       899999997543221     1234678899999775     34 4


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-----C-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-----A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-----~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ++|+|||+||.... ....++...+++|+.|+.+++++|++.+     + +||++||..+|+.....+.+|+     .+.
T Consensus        86 ~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~  159 (342)
T 2hrz_A           86 RPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-----FHT  159 (342)
T ss_dssp             CCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-----CCC
T ss_pred             CCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-----CCC
Confidence            89999999986431 1234678899999999999999998875     4 8999999999987655677777     456


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeC-CCCCCC-CcchHHHHHHHHHhCCCeEEecCCCceeeceecc
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG-PRMCLD-DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVS  331 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~G-p~~~~~-~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~  331 (335)
                      .+.+.|+.+|.++|.+++.++.+.+++.+++|++.+|| |+.... ...++..++..+.++.+..+.++++..++++|++
T Consensus       160 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  239 (342)
T 2hrz_A          160 TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR  239 (342)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehH
Confidence            67789999999999999999888889999999999999 664211 1346777888888888877767777788899999


Q ss_pred             cccC
Q 019794          332 DLVH  335 (335)
Q Consensus       332 Dva~  335 (335)
                      |+|+
T Consensus       240 Dva~  243 (342)
T 2hrz_A          240 SAVG  243 (342)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9873

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=9.2e-30  Score=231.50  Aligned_cols=187  Identities=21%  Similarity=0.179  Sum_probs=154.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC--CCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE--VDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~Vih~A~  189 (335)
                      |+|||||||||||++++++|+ +|++|++++|+..                .+.+|+.+.     .+.+  +|+|||+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~   63 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence            589999999999999999999 8999999998641                234555443     3444  999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .........++...+++|+.++.+++++|++.++||||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|.+
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  138 (299)
T 1n2s_A           64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEKA  138 (299)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHHH
T ss_pred             cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCC-----CCCCCccHHHHHHHHHHHH
Confidence            64433345678889999999999999999998889999999999998776677787     5667778999999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.++    .+++++||+++||++.    ..++..++..+..+.++..+++  ..++|+|++|+|+
T Consensus       139 ~~~~~----~~~~ilRp~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~  194 (299)
T 1n2s_A          139 LQDNC----PKHLIFRTSWVYAGKG----NNFAKTMLRLAKERQTLSVIND--QYGAPTGAELLAD  194 (299)
T ss_dssp             HHHHC----SSEEEEEECSEECSSS----CCHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHH
T ss_pred             HHHhC----CCeEEEeeeeecCCCc----CcHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHH
Confidence            98764    3899999999999974    3577788888888888777654  7899999999974

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=4.8e-29  Score=228.62  Aligned_cols=202  Identities=25%  Similarity=0.313  Sum_probs=159.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEcc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLA  188 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A  188 (335)
                      +||||||+||||++++++|+++  |++|++++|......          .++++.+|+.++     ++.  ++|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            5899999999999999999999  899999998643221          356788888765     344  799999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL-EHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~-~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      +.... ....++...+++|+.++.+++++|++.++ +||++||..+|+... ..+.+|+     .+..+.+.|+.+|..+
T Consensus        71 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~p~~~Y~~sK~~~  144 (317)
T 3ajr_A           71 GILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSI-----TITRPRTMFGVTKIAA  144 (317)
T ss_dssp             CCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSS-----SCCCCCSHHHHHHHHH
T ss_pred             cccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCcccc-----ccCCCCchHHHHHHHH
Confidence            86332 12346778999999999999999999887 999999999998643 2344555     4566778999999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.++++.+++++++||+.+||+...+..  ...+..++.....++++..+++++..++|+|++|+|+
T Consensus       145 e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  215 (317)
T 3ajr_A          145 ELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALK  215 (317)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHH
Confidence            99999998888999999999999998643221  1233333444556667777788888999999999873

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=1.5e-29  Score=235.33  Aligned_cols=200  Identities=24%  Similarity=0.316  Sum_probs=162.7

Q ss_pred             CCCCCCCCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCC
Q 019794          110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDR-GD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVD  182 (335)
Q Consensus       110 ~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD  182 (335)
                      .....++|+|||||||||||++++++|+++ |+ +|++++|+..... .+...+....+.++.+|+.+.     ++.++|
T Consensus        15 ~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D   93 (344)
T 2gn4_A           15 HQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS-EMAMEFNDPRMRFFIGDVRDLERLNYALEGVD   93 (344)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH-HHHHHHCCTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             HHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH-HHHHHhcCCCEEEEECCCCCHHHHHHHHhcCC
Confidence            344467899999999999999999999999 97 9999999643221 112222345788999999875     467899


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHH
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      +|||+||.......+.++...+++|+.|+.+++++|.+.++ +||++||..++                   .+.+.|+.
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~-------------------~p~~~Y~~  154 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA-------------------NPINLYGA  154 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS-------------------SCCSHHHH
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC-------------------CCccHHHH
Confidence            99999987543333456788999999999999999999987 89999997654                   23478999


Q ss_pred             HHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCC-CeEEecCCCceeeceecccccC
Q 019794          262 GKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQ-PMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       262 sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~-~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|+++|.+++.++.+   .+++++++|||+|||++     +++++.+..++.+++ ++.+ .+++..++|+|++|+|+
T Consensus       155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-----~~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~  226 (344)
T 2gn4_A          155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVS  226 (344)
T ss_dssp             HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT-----TSHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC-----CCHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHH
Confidence            999999999998764   58999999999999986     467888888888888 7776 57888999999999873

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=6.4e-29  Score=229.82  Aligned_cols=200  Identities=25%  Similarity=0.389  Sum_probs=154.7

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC--CCE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE--VDQ  183 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--vD~  183 (335)
                      ....+||+|||||||||||++|+++|+++|++|++++|......+.+..   ...++++.+|+.+.     ++.+  +|+
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            4456789999999999999999999999999999999975433222221   14788899999875     3445  999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccC----CCCCCCCCCCcCCCCCCCCCC-C
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYG----DPLEHPQKETYWGNVNPIGER-S  257 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~----~~~~~~~~E~~~~~~~~~~~~-~  257 (335)
                      |||+||..... ...++.  +++|+.++.+++++|.+.++ +||++||..+|+    .... +.+|+.       .+. +
T Consensus        93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-------~p~~~  161 (333)
T 2q1w_A           93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR-------NPANS  161 (333)
T ss_dssp             EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-------CCTTC
T ss_pred             EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-------CCCCC
Confidence            99999865432 222333  89999999999999999887 999999999998    5444 666662       445 7


Q ss_pred             hHHHHHHHHHHHHHH-HHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          258 CYDEGKRTAETLTMD-YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~-~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .|+.+|.++|.+++. ++     +++++||+++|||+.   ...+++.++..+.++.  .+++ ++..++|+|++|+|+
T Consensus       162 ~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~  229 (333)
T 2q1w_A          162 SYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN---VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLAR  229 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC---CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHH
T ss_pred             chHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC---cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHH
Confidence            899999999999987 54     899999999999982   3567788888877766  3345 677899999999973

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=7.9e-29  Score=233.19  Aligned_cols=213  Identities=23%  Similarity=0.291  Sum_probs=164.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-ccccccC-----CC-ceEEEeccccch-----hcc--CCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-NLVHHFR-----NP-RFELIRHDVVEP-----ILL--EVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~-----~~-~~~~~~~D~~~~-----~~~--~vD  182 (335)
                      |+||||||+||||++|+++|+++|++|++++|+...... .+.....     .. .++++.+|+.+.     ++.  ++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            799999999999999999999999999999997653211 1111110     12 678899999775     233  479


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC------CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG------AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~------~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      +|||+||.........++...+++|+.++.+++++|.+.+      .+||++||..+|+.... +.+|+     .+..+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~-----~~~~~~  182 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSET-----TPFHPR  182 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTT-----SCCCCC
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCC-----CCCCCC
Confidence            9999998644322345678899999999999999998765      28999999999997665 77777     456677


Q ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCCC-eEEecCCCceeeceeccccc
Q 019794          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva  334 (335)
                      +.|+.+|..+|.+++.++.+++++++++|++++|||+..... ...+..++..+..+.. ...+++++..++|+|++|+|
T Consensus       183 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva  262 (381)
T 1n7h_A          183 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  262 (381)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHH
Confidence            899999999999999999888999999999999999853211 1234555666666653 44568889999999999997


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       263 ~  263 (381)
T 1n7h_A          263 E  263 (381)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=7.4e-29  Score=240.52  Aligned_cols=219  Identities=20%  Similarity=0.193  Sum_probs=163.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhC---CCeEEEEecCCCCCc--cccccccC--------------CCceEEEeccc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDR---GDEVIVIDNFFTGRK--DNLVHHFR--------------NPRFELIRHDV  173 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~---g~~V~~~~r~~~~~~--~~~~~~~~--------------~~~~~~~~~D~  173 (335)
                      ..++|+|||||||||||++|+++|+++   |++|++++|+.....  ..+...+.              ..+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            456889999999999999999999999   899999999765321  11111111              25789999999


Q ss_pred             cch-----------hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCC
Q 019794          174 VEP-----------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       174 ~~~-----------~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~  241 (335)
                      .++           .+.++|+|||+||....    .++...+++|+.|+.+++++|++.++ +|||+||..+|+.....+
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~  225 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSA  225 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTT
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCC
Confidence            743           34579999999987543    56678899999999999999999887 899999999998876666


Q ss_pred             CCCCcCCCC-CC-----CCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC---CCcchHHHHHHHHHhC
Q 019794          242 QKETYWGNV-NP-----IGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL---DDGRVVSNFVAQAIRR  312 (335)
Q Consensus       242 ~~E~~~~~~-~~-----~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~---~~~~~i~~~~~~~~~~  312 (335)
                      ..|+..... .+     ....+.|+.+|+.+|.+++.++.+.+++++++||++|||++...   ....++..++......
T Consensus       226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~  305 (478)
T 4dqv_A          226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT  305 (478)
T ss_dssp             CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHH
T ss_pred             cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHc
Confidence            676632100 00     01125599999999999999988889999999999999985411   2244666666665554


Q ss_pred             CCeEE--ecC------CCceeeceecccccC
Q 019794          313 QPMTV--YGD------GKQTRSFQYVSDLVH  335 (335)
Q Consensus       313 ~~~~~--~g~------g~~~~~~v~v~Dva~  335 (335)
                      +..+.  ++.      ++..++|+||+|+|+
T Consensus       306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~  336 (478)
T 4dqv_A          306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAE  336 (478)
T ss_dssp             CEEESCSBCCCTTSCCCCCCCCEEEHHHHHH
T ss_pred             CcccccccccccccccccceeeeeeHHHHHH
Confidence            43321  111      257889999999974

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=5.6e-29  Score=225.64  Aligned_cols=184  Identities=21%  Similarity=0.283  Sum_probs=151.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhcc--CCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL--EVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~--~vD~Vih~A  188 (335)
                      .|+|||||||||||++|+++|+++|++|++++|.                    .+|+.+     ..+.  ++|+|||+|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            4699999999999999999999999999999884                    134433     3444  799999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      |.........++...+++|+.++.+++++|++.+++||++||..+|+.....+.+|+     .+..+.+.|+.+|..+|.
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~E~  146 (292)
T 1vl0_A           72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGEN  146 (292)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCC-----CCCCCccHHHHHHHHHHH
Confidence            864332234577889999999999999999998889999999999988766677787     456677899999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.++    .+++++||++|||++     ..++..++..+..+.++...++  ..++|+|++|+|+
T Consensus       147 ~~~~~~----~~~~~lR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~  202 (292)
T 1vl0_A          147 FVKALN----PKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLAR  202 (292)
T ss_dssp             HHHHHC----SSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHH
T ss_pred             HHHhhC----CCeEEEeeeeeeCCC-----cChHHHHHHHHhcCCcEEeecC--eeeCCccHHHHHH
Confidence            998763    479999999999982     3567777788888877776654  7889999999974

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=2.1e-28  Score=219.69  Aligned_cols=163  Identities=20%  Similarity=0.249  Sum_probs=139.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      +||+||||||+||||++++++|+++|++|++++|+.....        ...++++.+|+.+.     .+.++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            3578999999999999999999999999999999754322        35788999999875     4678999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDP-LEHPQKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      ..    ...++...+++|+.|+.+++++|++.+. +||++||..+|+.. ...+.+|+     .+..+.+.|+.+|..+|
T Consensus        74 ~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           74 IS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD-----VPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             CC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             Cc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            63    3457889999999999999999999886 99999999999743 34456666     56677789999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      .+++.++.+++++++++||+.|||+..
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIGSCTPEPN  171 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEECBCSSSCC
T ss_pred             HHHHHHHHHhCCeEEEEEeecccCCCC
Confidence            999999989999999999999999753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=2.3e-28  Score=223.95  Aligned_cols=194  Identities=19%  Similarity=0.233  Sum_probs=132.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A  188 (335)
                      +|+|||||||||||++|+++|+++|++|++++|+...           ..  ++.+|+.++     .+.  ++|+|||+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            5799999999999999999999999999999986432           01  455565543     344  499999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      |.........++...+++|+.++.+++++|.+.+++||++||..+|+. ...+.+|+     .+..+.+.|+.+|..+|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~-----~~~~~~~~Y~~sK~~~e~  142 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREE-----DIPAPLNLYGKTKLDGEK  142 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCC-----CCCCCcCHHHHHHHHHHH
Confidence            875443345577889999999999999999998889999999999987 45567777     455667899999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHH-hCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAI-RRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~-~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.+    +++++++||+.|||+..... ..++..++..+. .+.++...  ++..++|+|++|+|+
T Consensus       143 ~~~~~----~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~  203 (315)
T 2ydy_A          143 AVLEN----NLGAAVLRIPILYGEVEKLE-ESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVAT  203 (315)
T ss_dssp             HHHHH----CTTCEEEEECSEECSCSSGG-GSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHH
T ss_pred             HHHHh----CCCeEEEeeeeeeCCCCccc-ccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHH
Confidence            99875    56789999999999975311 145555666666 67666654  357789999999973

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.96  E-value=6.9e-29  Score=224.62  Aligned_cols=184  Identities=20%  Similarity=0.212  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC-CCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE-VDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~-vD~Vih~A  188 (335)
                      ++|+||||| +||||++|+++|+++|++|++++|+....         ...++++.+|+.+.     ++.+ +|+|||+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a   71 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYCV   71 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence            367999999 59999999999999999999999975431         24677888888765     3445 99999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      |..     ..++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..+.+.|+.+|..+|
T Consensus        72 ~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E  141 (286)
T 3gpi_A           72 AAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED-----TPPIAKDFSGKRMLEAE  141 (286)
T ss_dssp             HHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC-----CCCCCCChhhHHHHHHH
Confidence            852     245677889999999999999998886 8999999999998877777888     56777899999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+ +.+     ++++++||+++|||+.    .    .++..+.+ ...  .++++..++|+|++|+|+
T Consensus       142 ~~-~~~-----~~~~ilR~~~v~G~~~----~----~~~~~~~~-~~~--~~~~~~~~~~i~v~Dva~  192 (286)
T 3gpi_A          142 AL-LAA-----YSSTILRFSGIYGPGR----L----RMIRQAQT-PEQ--WPARNAWTNRIHRDDGAA  192 (286)
T ss_dssp             HH-GGG-----SSEEEEEECEEEBTTB----C----HHHHHTTC-GGG--SCSSBCEECEEEHHHHHH
T ss_pred             HH-Hhc-----CCeEEEecccccCCCc----h----hHHHHHHh-ccc--CCCcCceeEEEEHHHHHH
Confidence            98 552     8999999999999974    2    34444444 222  377888999999999974

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.95  E-value=4.4e-29  Score=231.01  Aligned_cols=216  Identities=20%  Similarity=0.266  Sum_probs=145.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--cccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      +|+|||||||||||++|+++|+++|++|++++|+.......  +........++++.+|+.++     ++.++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            67999999999999999999999999999999875432111  00110124678888998764     567899999999


Q ss_pred             CCCCCCCccCCh-hhHHhhHHHHHHHHHHHHHHcC-C-eEEEEeccc-ccCCCC---CCCCCCCcCCCCCCC---CCC-C
Q 019794          189 CPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSE-VYGDPL---EHPQKETYWGNVNPI---GER-S  257 (335)
Q Consensus       189 ~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~-v~~~~~---~~~~~E~~~~~~~~~---~~~-~  257 (335)
                      +....  ...++ ...+++|+.|+.+++++|++.+ + +|||+||.. +|+...   ..+.+|+.|....+.   .+. .
T Consensus        89 ~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           89 TPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            86421  12233 3488999999999999999985 5 899999976 443211   136778766543322   211 2


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCC------Cceeeceecc
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDG------KQTRSFQYVS  331 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g------~~~~~~v~v~  331 (335)
                      .|+.+|..+|.+++.+++++|++++++||++||||+........+..+. ....+.+. .++..      ...++|+|++
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~  244 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEF-LINGMKGMQMLSGSVSIAHVE  244 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHH-HHHHHHHHHHHHSSEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCcc-ccccccccccccCcccEEEHH
Confidence            5999999999999998877899999999999999975432222222222 22344322 11211      1234899999


Q ss_pred             cccC
Q 019794          332 DLVH  335 (335)
Q Consensus       332 Dva~  335 (335)
                      |+|+
T Consensus       245 Dva~  248 (338)
T 2rh8_A          245 DVCR  248 (338)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9873

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=2.4e-28  Score=213.47  Aligned_cols=190  Identities=17%  Similarity=0.130  Sum_probs=143.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~  190 (335)
                      +|+|+|||||||||++++++|+++|++|++++|+.......      ...++++.+|+.++     .+.++|+|||+||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence            57999999999999999999999999999999975433211      25788999999775     56789999999975


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ..      .....+++|+.++.+++++|++.++ +||++||..+|....... .|+     .+..+.+.|+.+|..+|.+
T Consensus        78 ~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~-----~~~~p~~~Y~~sK~~~e~~  145 (227)
T 3dhn_A           78 GW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR-LMD-----SGEVPENILPGVKALGEFY  145 (227)
T ss_dssp             ------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE-GGG-----TTCSCGGGHHHHHHHHHHH
T ss_pred             CC------CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc-ccc-----CCcchHHHHHHHHHHHHHH
Confidence            32      1223778999999999999999987 899999988775433322 222     3456678999999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.++++.+++++++||+++||++....  .+        ..+....+. .++. ++|+|++|+|+
T Consensus       146 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~--~~--------~~~~~~~~~-~~~~-~~~i~~~Dva~  199 (227)
T 3dhn_A          146 LNFLMKEKEIDWVFFSPAADMRPGVRTG--RY--------RLGKDDMIV-DIVG-NSHISVEDYAA  199 (227)
T ss_dssp             HHTGGGCCSSEEEEEECCSEEESCCCCC--CC--------EEESSBCCC-CTTS-CCEEEHHHHHH
T ss_pred             HHHHhhccCccEEEEeCCcccCCCcccc--ce--------eecCCCccc-CCCC-CcEEeHHHHHH
Confidence            9998877899999999999999975321  11        112222221 2222 78999999974

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=4.5e-28  Score=224.20  Aligned_cols=215  Identities=20%  Similarity=0.273  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc--ccccccC--CCceEEEeccccch-----hccCCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD--NLVHHFR--NPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ++|+||||||+||||++|+++|+++|++|++++|+......  .+.. +.  ...++++.+|+.++     ++.++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            56899999999999999999999999999999987542111  1101 11  12578889998764     467899999


Q ss_pred             EccCCCCCCCccCCh-hhHHhhHHHHHHHHHHHHHHcC-C-eEEEEeccc-ccCCCC-CCCCCCCcCCCCCC----CCCC
Q 019794          186 HLACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSE-VYGDPL-EHPQKETYWGNVNP----IGER  256 (335)
Q Consensus       186 h~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~-v~~~~~-~~~~~E~~~~~~~~----~~~~  256 (335)
                      |+|+...  ....++ ...+++|+.|+.+++++|++.+ + +||++||.. +|+... ..+.+|+.|.....    ..+.
T Consensus        83 h~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (337)
T 2c29_D           83 HVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTA  160 (337)
T ss_dssp             ECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCcc
Confidence            9998642  122233 3589999999999999999877 5 899999987 454322 23456665432111    0134


Q ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +.|+.+|.++|.+++.++++++++++++||++||||+........+.... ....+... .++.+ ....|+|++|+|+
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~-~~~~~-~~~~~i~v~Dva~  236 (337)
T 2c29_D          161 WMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL-SPITGNEA-HYSII-RQGQFVHLDDLCN  236 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT-HHHHTCGG-GHHHH-TEEEEEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCCc-ccccc-CCCCEEEHHHHHH
Confidence            57999999999999998877899999999999999975322111111111 12333322 12222 2345999999873

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.95  E-value=1e-27  Score=242.86  Aligned_cols=218  Identities=26%  Similarity=0.458  Sum_probs=162.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc--ccCCCceEEEeccccch-----hcc--CCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVVEP-----ILL--EVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~-----~~~--~vD~  183 (335)
                      ..++|+||||||+||||++|+++|+++|++|++++|...........  ......+.++.+|+.++     ++.  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            45678999999999999999999999999999999875433211111  11234677889998775     344  7999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC----CCCCCCCcCCCCCCCCCCCh
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL----EHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~----~~~~~E~~~~~~~~~~~~~~  258 (335)
                      |||+||.........++...+++|+.++.+++++|++.++ +||++||..+|+...    ..+.+|+     .+..+.+.
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-----~~~~p~~~  162 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNP  162 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-----CCCCCCCh
Confidence            9999986443223345677899999999999999998886 899999999998643    2345565     45566789


Q ss_pred             HHHHHHHHHHHHHHHHhh--hCCcEEEEEeCceeCCCCCC----C----CcchHHHHHHHHHh-CCCeEEec------CC
Q 019794          259 YDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYGPRMCL----D----DGRVVSNFVAQAIR-RQPMTVYG------DG  321 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~--~~i~~~ivRp~~v~Gp~~~~----~----~~~~i~~~~~~~~~-~~~~~~~g------~g  321 (335)
                      |+.+|+++|.+++.++.+  .+++++++||+++||++...    +    ...+++.+...+.. +.++.+++      ++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  242 (699)
T 1z45_A          163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  242 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence            999999999999998876  69999999999999986321    1    13455544443332 24566666      67


Q ss_pred             CceeeceecccccC
Q 019794          322 KQTRSFQYVSDLVH  335 (335)
Q Consensus       322 ~~~~~~v~v~Dva~  335 (335)
                      +..++||||+|+|+
T Consensus       243 ~~~~~~i~v~Dva~  256 (699)
T 1z45_A          243 TPIRDYIHVVDLAK  256 (699)
T ss_dssp             SCEECEEEHHHHHH
T ss_pred             CeeEeeEEHHHHHH
Confidence            88999999999873

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=7.3e-28  Score=221.08  Aligned_cols=213  Identities=19%  Similarity=0.286  Sum_probs=143.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCCCc--cccccccC--CCceEEEeccccch-----hccCCCEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN-FFTGRK--DNLVHHFR--NPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r-~~~~~~--~~~~~~~~--~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      +|+|||||||||||++++++|+++|++|++++| +.....  ..+. .+.  ...++++.+|+.++     ++.++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            479999999999999999999999999999988 542211  1111 111  12567888888764     467899999


Q ss_pred             EccCCCCCCCccCC-hhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEeccccc-CCCC-CCCCCCCcCCCCC---CCCCCC
Q 019794          186 HLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEVY-GDPL-EHPQKETYWGNVN---PIGERS  257 (335)
Q Consensus       186 h~A~~~~~~~~~~~-~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v~-~~~~-~~~~~E~~~~~~~---~~~~~~  257 (335)
                      |+|+..  .....+ +..++++|+.|+.+++++|.+. ++ +||++||..++ +... ..+.+|+.|....   +..+..
T Consensus        80 h~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           80 HTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            999743  112223 3458999999999999999987 65 89999998754 3321 2345666543211   112223


Q ss_pred             -hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          258 -CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 -~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                       .|+.+|..+|.++++++.+++++++++||++||||.........+..+ .....+....+ ++  ..++|+|++|+|+
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~-~~~~~g~~~~~-~~--~~~~~i~v~Dva~  232 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKA-LVLVLGKKEQI-GV--TRFHMVHVDDVAR  232 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHH-THHHHSCGGGC-CE--EEEEEEEHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHH-HHHHhCCCccC-cC--CCcCEEEHHHHHH
Confidence             699999999999999887789999999999999997532211222222 22344443322 22  3348999999973

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.4e-27  Score=214.81  Aligned_cols=193  Identities=18%  Similarity=0.209  Sum_probs=148.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCC-
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH-  195 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~-  195 (335)
                      |||||||||||||++|+++|+++|++|++++|++...             ++...++....+.++|.|||+|+...... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------~~~~~~~~~~~l~~~d~vihla~~~i~~~~   67 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------RITWDELAASGLPSCDAAVNLAGENILNPL   67 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------EEEHHHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------eeecchhhHhhccCCCEEEEeccCcccchh
Confidence            6899999999999999999999999999999864321             11111233456789999999997422111 


Q ss_pred             --c-cCChhhHHhhHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          196 --Y-KYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       196 --~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~---r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                        + ......+++.|+.+|.+++++++..+.   ++|++||..+|+.....+.+|+     .|..+.+.|+..|...|..
T Consensus        68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~-----~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED-----SPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTT-----CCCSCSSHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCccccc-----CCccccchhHHHHHHHHHH
Confidence              1 123456789999999999999998774   4889999999999888888888     5777778888888877765


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..  ....+++++++||+.||||+     ++.+..+......+... .++++++.++||||+|+|+
T Consensus       143 ~~--~~~~~~~~~~~r~~~v~g~~-----~~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~  200 (298)
T 4b4o_A          143 AR--LPGDSTRQVVVRSGVVLGRG-----GGAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAG  200 (298)
T ss_dssp             HC--CSSSSSEEEEEEECEEECTT-----SHHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHH
T ss_pred             HH--hhccCCceeeeeeeeEEcCC-----CCchhHHHHHHhcCCcc-eecccCceeecCcHHHHHH
Confidence            32  34568999999999999996     45556666666555443 4599999999999999974

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.95  E-value=2.8e-27  Score=226.17  Aligned_cols=214  Identities=20%  Similarity=0.173  Sum_probs=158.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc------cccccc-------cCCCceEEEeccccch----
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK------DNLVHH-------FRNPRFELIRHDVVEP----  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~------~~~~~~-------~~~~~~~~~~~D~~~~----  176 (335)
                      ..+|+|||||||||||++|+++|++.|++|++++|+.....      +.+...       ....++.++.+|+.++    
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45779999999999999999999999999999999865211      001000       1125788999999873    


Q ss_pred             hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCC-----CCCCCCCCcCCCCC
Q 019794          177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP-----LEHPQKETYWGNVN  251 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~-----~~~~~~E~~~~~~~  251 (335)
                      .+.++|+|||+||...   ...++...+++|+.|+.+++++|.+.+.+||++||..+ |..     ...+.+|+.+.  .
T Consensus       147 ~~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~--~  220 (427)
T 4f6c_A          147 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVY--K  220 (427)
T ss_dssp             CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC--S
T ss_pred             CcCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccc--c
Confidence            3468999999998643   33567889999999999999999994459999999988 442     23456666432  1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-----CcchHHHHHHHHHhCCCeEEecCCCceee
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-----DGRVVSNFVAQAIRRQPMTVYGDGKQTRS  326 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-----~~~~i~~~~~~~~~~~~~~~~g~g~~~~~  326 (335)
                      +..+.+.|+.+|+.+|.+++.+++ .|++++++|||+|||+.....     ....+..++..+..++.+.. ++++..++
T Consensus       221 ~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  298 (427)
T 4f6c_A          221 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVD  298 (427)
T ss_dssp             SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEEC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEE
Confidence            234678999999999999999764 699999999999999975322     12457788888888877664 55678999


Q ss_pred             ceecccccC
Q 019794          327 FQYVSDLVH  335 (335)
Q Consensus       327 ~v~v~Dva~  335 (335)
                      |+|++|+|+
T Consensus       299 ~v~v~DvA~  307 (427)
T 4f6c_A          299 FSFVDTTAR  307 (427)
T ss_dssp             CEEHHHHHH
T ss_pred             EeeHHHHHH
Confidence            999999974

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.95  E-value=2.3e-27  Score=214.40  Aligned_cols=184  Identities=18%  Similarity=0.103  Sum_probs=145.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      ++|+|||||| ||||++|+++|+++|++|++++|+......     +....++++.+|+.+..+.++|+|||+|+.....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~   77 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-----IRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGG   77 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-----HHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTB
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-----HhhCCCeEEEecccccccCCCCEEEECCCccccc
Confidence            4689999998 999999999999999999999996532211     1124688899998775578899999999854321


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHH--cCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHH
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKR--VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM  271 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~  271 (335)
                          +         ..+.+++++|++  .++ +|||+||..+|+.....+.+|+     .+..+.+.|+.+|+.+|++++
T Consensus        78 ----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~  139 (286)
T 3ius_A           78 ----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET-----TPLTPTAARGRWRVMAEQQWQ  139 (286)
T ss_dssp             ----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             ----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHHHH
Confidence                1         135689999988  565 8999999999998877778888     567778899999999999998


Q ss_pred             HHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          272 DYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       272 ~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+   .+++++++||+++||++...         +..+.++....+.++ +..++|+|++|+|+
T Consensus       140 ~~---~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~  190 (286)
T 3ius_A          140 AV---PNLPLHVFRLAGIYGPGRGP---------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQ  190 (286)
T ss_dssp             HS---TTCCEEEEEECEEEBTTBSS---------STTSSSSCCCEEECT-TCCBCEEEHHHHHH
T ss_pred             hh---cCCCEEEEeccceECCCchH---------HHHHhcCCccccCCC-CcccceEEHHHHHH
Confidence            86   58999999999999997532         233455666776555 57889999999974

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.94  E-value=1.6e-27  Score=223.39  Aligned_cols=175  Identities=27%  Similarity=0.370  Sum_probs=149.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH  195 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~  195 (335)
                      |+|||||||||||++|+++|+++|+ +|++++|+                   .+.+..+.++.++|+|||+||....  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~--   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRP--   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCC--
Confidence            5899999999999999999999999 99998874                   1122233455679999999986543  


Q ss_pred             ccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019794          196 YKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY  273 (335)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~  273 (335)
                        .++...+++|+.++.+++++|++.++  +||++||..+|+                    .+.|+.+|..+|.+++.+
T Consensus        60 --~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------------~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           60 --EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             --TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------------CSHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------------CCCchHHHHHHHHHHHHH
Confidence              35667788999999999999999884  799999999985                    367999999999999999


Q ss_pred             HhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          274 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       274 a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.+++++++||+++||++..+..++++..++..+..+.++.+ ++++..++|+|++|+|+
T Consensus       118 ~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~  178 (369)
T 3st7_A          118 AEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVA  178 (369)
T ss_dssp             HHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHH
T ss_pred             HHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHH
Confidence            98899999999999999998755556789999999999888776 68889999999999974

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=3.8e-27  Score=211.15  Aligned_cols=160  Identities=23%  Similarity=0.273  Sum_probs=134.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~  190 (335)
                      ||+|||||||||||++|+++|+++|++|++++|+.....        ...++++.+|+.++     .+.++|+|||+||.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            468999999999999999999999999999999754311        13567888998764     46789999999986


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPL-EHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~-~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      .    ...++...+++|+.++.+++++|++.++ +||++||..+|+... ..+.+|+     .+..+.+.|+.+|+.+|.
T Consensus        74 ~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~  144 (267)
T 3ay3_A           74 S----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-----VPRRPDSLYGLSKCFGED  144 (267)
T ss_dssp             C----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             C----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHHH
Confidence            4    2346788999999999999999999886 899999999998643 4567777     466677899999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      +++.++.+.+++++++||+++|+.
T Consensus       145 ~~~~~~~~~gi~~~~lrp~~v~~~  168 (267)
T 3ay3_A          145 LASLYYHKFDIETLNIRIGSCFPK  168 (267)
T ss_dssp             HHHHHHHTTCCCEEEEEECBCSSS
T ss_pred             HHHHHHHHcCCCEEEEeceeecCC
Confidence            999988888999999999999953

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.94  E-value=6.9e-27  Score=228.73  Aligned_cols=194  Identities=22%  Similarity=0.189  Sum_probs=148.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc---cchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---VEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~vD~Vih~A~~~~  192 (335)
                      +|+|||||||||||++|+++|+++|++|++++|+......             +.+|+   ....+.++|+|||+||...
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-------------v~~d~~~~~~~~l~~~D~Vih~A~~~~  213 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-------------RFWDPLNPASDLLDGADVLVHLAGEPI  213 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-------------EECCTTSCCTTTTTTCSEEEECCCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-------------eeecccchhHHhcCCCCEEEECCCCcc
Confidence            7899999999999999999999999999999997653211             22333   3456788999999998654


Q ss_pred             CCC-ccCChhhHHhhHHHHHHHHHHH-HHHcCC-eEEEEecccccC-CCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          193 PVH-YKYNPVKTIKTNVMGTLNMLGL-AKRVGA-KFLLTSTSEVYG-DPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       193 ~~~-~~~~~~~~~~~Nv~gt~~ll~~-a~~~~~-r~v~iSS~~v~~-~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      ... ...++..++++|+.|+.+++++ +++.++ +||++||..+|+ .....+.+|+.     +. +.+.|+.+|...|.
T Consensus       214 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~-----~~-~~~~y~~~~~~~E~  287 (516)
T 3oh8_A          214 FGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEES-----ES-GDDFLAEVCRDWEH  287 (516)
T ss_dssp             ---CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTS-----CC-CSSHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCC-----CC-CcChHHHHHHHHHH
Confidence            332 2345677899999999999999 555666 899999999998 44455667763     33 56789999999998


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.. +.+.|++++++||++|||++     .+++..+...+..+... .++++++.++|+|++|+|+
T Consensus       288 ~~~~-~~~~gi~~~ilRp~~v~Gp~-----~~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~  347 (516)
T 3oh8_A          288 ATAP-ASDAGKRVAFIRTGVALSGR-----GGMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTD  347 (516)
T ss_dssp             TTHH-HHHTTCEEEEEEECEEEBTT-----BSHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHH
T ss_pred             HHHH-HHhCCCCEEEEEeeEEECCC-----CChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHH
Confidence            7655 35579999999999999997     35666666655555443 4689999999999999973

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.94  E-value=5.6e-27  Score=229.00  Aligned_cols=214  Identities=20%  Similarity=0.176  Sum_probs=158.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc------cccc-------cccCCCceEEEeccccc-h---
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK------DNLV-------HHFRNPRFELIRHDVVE-P---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~------~~~~-------~~~~~~~~~~~~~D~~~-~---  176 (335)
                      ..+|+|||||||||||++|+++|++.|++|++++|......      +.+.       ......+++++.+|+.+ +   
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            34679999999999999999999999999999999765211      0000       01123578999999988 3   


Q ss_pred             hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCC-----CCCCCCCCcCCCCC
Q 019794          177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP-----LEHPQKETYWGNVN  251 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~-----~~~~~~E~~~~~~~  251 (335)
                      ...++|+|||+||...   ...++...+++|+.++.+++++|++.+.+|||+||..+ |..     ...+.+|+.+.  .
T Consensus       228 ~~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~--~  301 (508)
T 4f6l_B          228 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVY--K  301 (508)
T ss_dssp             CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSC--S
T ss_pred             CccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCccccccccc--c
Confidence            3458999999998643   34567788999999999999999985559999999988 432     23455666432  1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC-----CcchHHHHHHHHHhCCCeEEecCCCceee
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD-----DGRVVSNFVAQAIRRQPMTVYGDGKQTRS  326 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~-----~~~~i~~~~~~~~~~~~~~~~g~g~~~~~  326 (335)
                      +..+.+.|+.+|+.+|.+++.+++ .|++++++||++|||+.....     ....+..++..+...+.+.. ++++..++
T Consensus       302 ~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~  379 (508)
T 4f6l_B          302 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVD  379 (508)
T ss_dssp             SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEE
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEE
Confidence            234678999999999999999754 699999999999999975322     12346777777777665553 55788999


Q ss_pred             ceecccccC
Q 019794          327 FQYVSDLVH  335 (335)
Q Consensus       327 ~v~v~Dva~  335 (335)
                      |+|++|+|+
T Consensus       380 ~v~v~DvA~  388 (508)
T 4f6l_B          380 FSFVDTTAR  388 (508)
T ss_dssp             CEEHHHHHH
T ss_pred             EEcHHHHHH
Confidence            999999874

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.94  E-value=2.8e-26  Score=214.01  Aligned_cols=200  Identities=14%  Similarity=0.100  Sum_probs=152.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-----CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccC---CC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-----DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLE---VD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~---vD  182 (335)
                      +|+|||||||||||++|+++|+++|     ++|++++|......      .....++++.+|+.+.     ++.+   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            4689999999999999999999999     99999999755432      1235678899998775     3556   99


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc--CC-eEE-------EEecccccCCC--CCCCCCCCcCCCC
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV--GA-KFL-------LTSTSEVYGDP--LEHPQKETYWGNV  250 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--~~-r~v-------~iSS~~v~~~~--~~~~~~E~~~~~~  250 (335)
                      +|||+||...     .++...+++|+.++.+++++|++.  ++ ++|       |+||..+||..  ...+.+|+.    
T Consensus        75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~----  145 (364)
T 2v6g_A           75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL----  145 (364)
T ss_dssp             EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS----
T ss_pred             EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccc----
Confidence            9999998642     467889999999999999999987  55 776       79999999875  235667763    


Q ss_pred             CCCCC-CChHHHHHHHHHHHHHHHHhhhC-CcEEEEEeCceeCCCCCCCCcchHHHH-HHHH--HhCCCeEEecCCCc--
Q 019794          251 NPIGE-RSCYDEGKRTAETLTMDYHRGAG-VEVRIARIFNTYGPRMCLDDGRVVSNF-VAQA--IRRQPMTVYGDGKQ--  323 (335)
Q Consensus       251 ~~~~~-~~~Y~~sK~~~E~l~~~~a~~~~-i~~~ivRp~~v~Gp~~~~~~~~~i~~~-~~~~--~~~~~~~~~g~g~~--  323 (335)
                       +..+ .+.|    +.+|++++.++++.+ ++++++||++||||+.......+++.+ +..+  ..+.++.+++++++  
T Consensus       146 -~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  220 (364)
T 2v6g_A          146 -PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWD  220 (364)
T ss_dssp             -CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHH
T ss_pred             -cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccc
Confidence             2222 4577    458999988887776 999999999999998643223445553 3444  36777776788744  


Q ss_pred             -eeeceecccccC
Q 019794          324 -TRSFQYVSDLVH  335 (335)
Q Consensus       324 -~~~~v~v~Dva~  335 (335)
                       ..+++|++|+|+
T Consensus       221 ~~~~~~~v~Dva~  233 (364)
T 2v6g_A          221 GYSDCSDADLIAE  233 (364)
T ss_dssp             SCBCCEEHHHHHH
T ss_pred             ccCCCCcHHHHHH
Confidence             466777788863

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=4.4e-26  Score=200.53  Aligned_cols=182  Identities=17%  Similarity=0.215  Sum_probs=137.4

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCce-EEEecccc---chhccCCCEEEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF-ELIRHDVV---EPILLEVDQIYH  186 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~---~~~~~~vD~Vih  186 (335)
                      ...+++|+|+|||||||||++++++|+++|++|++++|+...... +    ....+ +++.+|+.   .+.+.++|+|||
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~----~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~   90 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-L----RERGASDIVVANLEEDFSHAFASIDAVVF   90 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-H----HHTTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-H----HhCCCceEEEcccHHHHHHHHcCCCEEEE
Confidence            345678999999999999999999999999999999997543221 1    11356 78888886   345678999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      +||...    ..++...+++|+.++.+++++|++.++ +||++||...+..       +.     .+ .+...|+.+|..
T Consensus        91 ~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~-----~~-~~~~~Y~~sK~~  153 (236)
T 3e8x_A           91 AAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQ-----GP-MNMRHYLVAKRL  153 (236)
T ss_dssp             CCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GG-----SC-GGGHHHHHHHHH
T ss_pred             CCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CC-----Ch-hhhhhHHHHHHH
Confidence            998643    256888999999999999999999886 8999999544321       11     11 345789999999


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|.+++    +.+++++++||+.+||+..                 ...+....++...++++|++|+|+
T Consensus       154 ~e~~~~----~~gi~~~~lrpg~v~~~~~-----------------~~~~~~~~~~~~~~~~i~~~Dva~  202 (236)
T 3e8x_A          154 ADDELK----RSSLDYTIVRPGPLSNEES-----------------TGKVTVSPHFSEITRSITRHDVAK  202 (236)
T ss_dssp             HHHHHH----HSSSEEEEEEECSEECSCC-----------------CSEEEEESSCSCCCCCEEHHHHHH
T ss_pred             HHHHHH----HCCCCEEEEeCCcccCCCC-----------------CCeEEeccCCCcccCcEeHHHHHH
Confidence            999886    4699999999999999853                 112333345555678888888863

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=4.6e-26  Score=204.20  Aligned_cols=184  Identities=17%  Similarity=0.154  Sum_probs=146.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc--CCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~  189 (335)
                      |+|+|||||||||++++++|++ |++|++++|+....          ..   +.+|+.++     .+.  ++|+|||+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            5899999999999999999995 89999999975321          11   67787764     334  3999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .........++...+++|+.++.+++++|++.+++||++||..+|+.... +.+|+     .+..+.+.|+.+|..+|.+
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~-----~~~~~~~~Y~~sK~~~e~~  140 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEE-----DIPNPINYYGLSKLLGETF  140 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTT-----SCCCCSSHHHHHHHHHHHH
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCC-----CCCCCCCHHHHHHHHHHHH
Confidence            64432234578889999999999999999998889999999999976543 56666     4556678999999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.      ++++++||+.+||+      ..+...++..+..+.++..+++   .++++|++|+|+
T Consensus       141 ~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~  191 (273)
T 2ggs_A          141 ALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLAS  191 (273)
T ss_dssp             HCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHH
T ss_pred             HhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHH
Confidence            865      67899999999983      4556666677777877776554   789999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=2e-25  Score=194.03  Aligned_cols=150  Identities=16%  Similarity=0.190  Sum_probs=122.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-h-----hccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-P-----ILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~-----~~~~vD~Vih~A~~  190 (335)
                      |+|+|||||||||++++++|+++|++|++++|+.......       ..++++.+|+.+ +     .+.++|+|||+||.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            5899999999999999999999999999999975433221       578999999988 4     56789999999986


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ..        ...+++|+.++.+++++|++.++ +||++||..++...   +..|      .+..+.+.|+.+|..+|.+
T Consensus        74 ~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e------~~~~~~~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           74 GG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG------AGFDALKDYYIAKHFADLY  136 (219)
T ss_dssp             TT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS------HHHHHTHHHHHHHHHHHHH
T ss_pred             CC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc------cccccccHHHHHHHHHHHH
Confidence            43        22667999999999999999986 89999998776432   1122      1223457899999999999


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      ++   +..+++++++||+.+||+.
T Consensus       137 ~~---~~~~i~~~ilrp~~v~g~~  157 (219)
T 3dqp_A          137 LT---KETNLDYTIIQPGALTEEE  157 (219)
T ss_dssp             HH---HSCCCEEEEEEECSEECSC
T ss_pred             HH---hccCCcEEEEeCceEecCC
Confidence            86   4579999999999999985

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.93  E-value=1.3e-25  Score=194.93  Aligned_cols=186  Identities=16%  Similarity=0.224  Sum_probs=122.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch---hccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---ILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~vD~Vih~A~~~~~  193 (335)
                      |+|+|||||||||++++++|+++|++|++++|+......    . . ..++++.+|+.++   .+.++|+|||+||....
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~-~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ----T-H-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPD   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH----H-C-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh----c-c-CCCeEEeccccChhhhhhcCCCEEEECCcCCcc
Confidence            589999999999999999999999999999997543221    1 1 5678999999875   67889999999986321


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEeccccc-CCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHH
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY-GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM  271 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~-~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~  271 (335)
                               ..+.|+.++.+++++|++.+. ++|++||..++ +.....+..|+     .+..+.+.|+.+|...|.+ .
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-----~~~~~~~~y~~~k~~~e~~-~  139 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLES-----KGLREAPYYPTARAQAKQL-E  139 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC------------------------CCCSCCHHHHHHHH-H
T ss_pred             ---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcccccc-----CCCCCHHHHHHHHHHHHHH-H
Confidence                     246799999999999999875 99999997654 33333334444     3445567799999999997 3


Q ss_pred             HHHh-hhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          272 DYHR-GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       272 ~~a~-~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+.. +.+++++++||+.+||++...  +.    +   ...+..+...+++.   ++++++|+|+
T Consensus       140 ~~~~~~~gi~~~ivrp~~v~g~~~~~--~~----~---~~~~~~~~~~~~~~---~~i~~~Dva~  192 (221)
T 3ew7_A          140 HLKSHQAEFSWTYISPSAMFEPGERT--GD----Y---QIGKDHLLFGSDGN---SFISMEDYAI  192 (221)
T ss_dssp             HHHTTTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHH
T ss_pred             HHHhhccCccEEEEeCcceecCCCcc--Cc----e---EeccccceecCCCC---ceEeHHHHHH
Confidence            3433 679999999999999984311  11    1   11233344434432   6899999873

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.92  E-value=2.1e-25  Score=194.25  Aligned_cols=188  Identities=13%  Similarity=0.067  Sum_probs=134.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch---hccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP---ILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~vD~Vih~A~~~~~  193 (335)
                      |+|||||||||||++++++|+++|++|++++|+......     +....++++.+|+.++   .+.++|+|||+||....
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD-----RLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWG   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----HTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc-----ccCCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence            589999999999999999999999999999996543221     1235788999999875   57889999999986421


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC-CCCC--CCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD-PLEH--PQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~-~~~~--~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      .       ...+.|+.++.+++++|++.+.++|++||..++.. ....  +.+|.     ....+.+.|+.+|..+|.+ 
T Consensus        76 ~-------~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~-----~~~~~~~~y~~sK~~~e~~-  142 (224)
T 3h2s_A           76 S-------GRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFP-----ESAASQPWYDGALYQYYEY-  142 (224)
T ss_dssp             S-------SCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCC-----GGGGGSTTHHHHHHHHHHH-
T ss_pred             c-------chhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCC-----CCCccchhhHHHHHHHHHH-
Confidence            1       12468999999999999998889999999755433 2221  22222     1223357899999999954 


Q ss_pred             HHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          271 MDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..+.++.+++++++||+.+||++...   .+.       .....+.   .+...++++|++|+|+
T Consensus       143 ~~~~~~~~i~~~ivrp~~v~g~~~~~---~~~-------~~~~~~~---~~~~~~~~i~~~DvA~  194 (224)
T 3h2s_A          143 QFLQMNANVNWIGISPSEAFPSGPAT---SYV-------AGKDTLL---VGEDGQSHITTGNMAL  194 (224)
T ss_dssp             HHHTTCTTSCEEEEEECSBCCCCCCC---CEE-------EESSBCC---CCTTSCCBCCHHHHHH
T ss_pred             HHHHhcCCCcEEEEcCccccCCCccc---Cce-------ecccccc---cCCCCCceEeHHHHHH
Confidence            55555679999999999999985321   110       0111111   1234467899999873

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-24  Score=188.24  Aligned_cols=177  Identities=19%  Similarity=0.212  Sum_probs=133.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccchh-ccC--CCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-LLE--VDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~--vD~Vih~A~  189 (335)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+...         ....++++.+|+.+.. +..  +|+|||+||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~   74 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLG   74 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhhhcEEEECee
Confidence            467999999999999999999999998  99999997543         1246777888887642 111  899999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      ....  ...++...+++|+.++.+++++|++.+. +||++||..+|+.                  +.+.|+.+|..+|.
T Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------------~~~~y~~sK~~~e~  134 (215)
T 2a35_A           75 TTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQ  134 (215)
T ss_dssp             CCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHH
T ss_pred             eccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------------CccHHHHHHHHHHH
Confidence            5321  2356788999999999999999999887 7999999988742                  23689999999999


Q ss_pred             HHHHHHhhhCCc-EEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVE-VRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~-~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.    .+++ ++++||+.+||+...   ..++..+    . +..... +++  .++++|++|+|+
T Consensus       135 ~~~~----~~~~~~~~vrp~~v~g~~~~---~~~~~~~----~-~~~~~~-~~~--~~~~i~~~Dva~  187 (215)
T 2a35_A          135 ALQE----QGWPQLTIARPSLLFGPREE---FRLAEIL----A-APIARI-LPG--KYHGIEACDLAR  187 (215)
T ss_dssp             HHTT----SCCSEEEEEECCSEESTTSC---EEGGGGT----T-CCCC-----C--HHHHHHHHHHHH
T ss_pred             HHHH----cCCCeEEEEeCceeeCCCCc---chHHHHH----H-Hhhhhc-cCC--CcCcEeHHHHHH
Confidence            8865    4899 999999999999742   2222211    1 222222 333  568999999873

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.90  E-value=1.5e-23  Score=184.65  Aligned_cols=183  Identities=15%  Similarity=0.088  Sum_probs=135.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|+........     ...+.++.+|+.++     .+.++|+||||
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   91 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFCC   91 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhcCCCEEEEC
Confidence            467999999999999999999999999  9999999765432211     13567888898764     45689999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      ||....   ..++...+++|+.++.++++++++.+. +||++||..+|+.                  +...|+.+|..+
T Consensus        92 ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~Y~~sK~~~  150 (242)
T 2bka_A           92 LGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYLQVKGEV  150 (242)
T ss_dssp             CCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHH
T ss_pred             CCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------------CcchHHHHHHHH
Confidence            985321   124567899999999999999999886 8999999988742                  235799999999


Q ss_pred             HHHHHHHHhhhCC-cEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGV-EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i-~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.    .++ +++++|||.+||+...   ......+........+.. ++    ...+++++|+|+
T Consensus       151 e~~~~~----~~~~~~~~vrpg~v~~~~~~---~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~dva~  208 (242)
T 2bka_A          151 EAKVEE----LKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSLPDS-WA----SGHSVPVVTVVR  208 (242)
T ss_dssp             HHHHHT----TCCSEEEEEECCEEECTTGG---GSHHHHHHHHHHCSCCTT-GG----GGTEEEHHHHHH
T ss_pred             HHHHHh----cCCCCeEEEcCceecCCCCC---CcHHHHHHHHhhcccCcc-cc----CCcccCHHHHHH
Confidence            999865    467 5999999999999642   122333333333322211 11    124899999873

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.90  E-value=1e-24  Score=196.96  Aligned_cols=163  Identities=18%  Similarity=0.111  Sum_probs=126.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.....+... . ....+.++.+|+.+..            +.++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA-A-YPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH-H-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-h-ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999997554332221 1 1347889999998751            2379


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGL----AKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~----a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||......    ..+++...+++|+.|+.+++++    +++.+. +||++||...+                .+
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------------~~  144 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ----------------LS  144 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------CC
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc----------------CC
Confidence            99999999654322    2235677899999995555554    455565 89999998765                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                      ..+...|+.+|++.|.+++.++.+   .|+++++++||.|+++..
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (281)
T 3m1a_A          145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLF  189 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccc
Confidence            445678999999999999999988   699999999999988753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-23  Score=185.21  Aligned_cols=192  Identities=18%  Similarity=0.134  Sum_probs=138.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQI  184 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~V  184 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+.....+.. ..  ...++++.+|+.++.        +..+|+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-KE--CPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH--STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hh--ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            356789999999999999999999999999999998653322111 11  124567788987752        2358999


Q ss_pred             EEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||||.......    .+++...+++|+.++.++++++.+.    +  .+||++||...|.                +..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~  144 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TFP  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCT
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC----------------CCC
Confidence            999996543322    2346779999999999999887653    4  4899999988763                223


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecc
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVS  331 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~  331 (335)
                      ....|+.+|++.|.+++.++.+   .+++++++|||.++++....  ....+.++..+.++.+         .++|++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~  213 (244)
T 1cyd_A          145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK--VSADPEFARKLKERHP---------LRKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH--HTCCHHHHHHHHHHST---------TSSCBCHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc--cccCHHHHHHHHhcCC---------ccCCCCHH
Confidence            4468999999999999999877   48999999999999974210  0001233344443322         24678888


Q ss_pred             ccc
Q 019794          332 DLV  334 (335)
Q Consensus       332 Dva  334 (335)
                      |+|
T Consensus       214 dva  216 (244)
T 1cyd_A          214 DVV  216 (244)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.90  E-value=7.4e-24  Score=189.17  Aligned_cols=163  Identities=18%  Similarity=0.119  Sum_probs=128.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....+.... + ...+.++.+|+.++.            +.+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE-I-GPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-h-CCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999865433222222 1 246788999998751            237


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV------GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+.      +.++|++||...+                
T Consensus        83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------  146 (259)
T 4e6p_A           83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR----------------  146 (259)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc----------------
Confidence            9999999997544332    2356788999999999999987543      3489999998765                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       147 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  192 (259)
T 4e6p_A          147 RGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH  192 (259)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence            233445789999999999999999875   8999999999999985

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.90  E-value=1.3e-23  Score=189.73  Aligned_cols=172  Identities=13%  Similarity=0.143  Sum_probs=131.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      |+|||||||||||++++++|+++  |++|++++|+...... +    ....++++.+|+.++     ++.++|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-L----ADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-H----HHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-H----hhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            57999999999999999999999  9999999997543221 1    123578889998774     5678999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      .. .     .  .  ++|+.++.+++++|++.++ +||++||..+|.               .+    ..|+.+|..+|.
T Consensus        76 ~~-~-----~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------------~~----~~y~~~K~~~E~  126 (287)
T 2jl1_A           76 PH-Y-----D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE---------------SI----IPLAHVHLATEY  126 (287)
T ss_dssp             CC-S-----C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG---------------CC----STHHHHHHHHHH
T ss_pred             CC-c-----C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---------------CC----CchHHHHHHHHH
Confidence            42 1     1  1  5799999999999999987 899999988762               11    369999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.    .+++++++||+.++|+..    ..    ++......+... .+.++..++|+|++|+|+
T Consensus       127 ~~~~----~~~~~~ilrp~~~~~~~~----~~----~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~  180 (287)
T 2jl1_A          127 AIRT----TNIPYTFLRNALYTDFFV----NE----GLRASTESGAIV-TNAGSGIVNSVTRNELAL  180 (287)
T ss_dssp             HHHH----TTCCEEEEEECCBHHHHS----SG----GGHHHHHHTEEE-ESCTTCCBCCBCHHHHHH
T ss_pred             HHHH----cCCCeEEEECCEeccccc----hh----hHHHHhhCCcee-ccCCCCccCccCHHHHHH
Confidence            8854    689999999999888641    11    222333333333 466778899999999873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.89  E-value=2.9e-23  Score=184.24  Aligned_cols=165  Identities=15%  Similarity=0.094  Sum_probs=127.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.++.            +.
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999999754322111110 01346788899997751            23


Q ss_pred             CCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|+||||||.......   .+++...+++|+.++.++++++.    +.+. +||++||...+.                
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  151 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------  151 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------
Confidence            79999999997544222   23467889999999999999875    3454 899999987763                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|.+.|.+++.++.+.   +++++++|||.++++.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~  196 (255)
T 1fmc_A          152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence            23345789999999999999998775   8999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.89  E-value=3.5e-22  Score=179.48  Aligned_cols=165  Identities=19%  Similarity=0.111  Sum_probs=131.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+.....  ...+.++.+|+.++            .+.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999999765433322222  34677888999875            234


Q ss_pred             CCCEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ++|+||||||......      ..+++...+++|+.|+.++++++    ++.+. +||++||...+              
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~--------------  150 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAH--------------  150 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT--------------
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHc--------------
Confidence            7999999999753311      23356789999999999999988    44554 89999998776              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                        .+......|+.+|.+.+.+++.++.+   +|+++++++||.|+++..
T Consensus       151 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  197 (271)
T 3tzq_B          151 --AAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL  197 (271)
T ss_dssp             --SBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             --CCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence              23344578999999999999999987   589999999999999864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.89  E-value=2.3e-23  Score=193.48  Aligned_cols=183  Identities=16%  Similarity=0.244  Sum_probs=137.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc--cccCCCceEEEeccccch-----hcc--CCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV--HHFRNPRFELIRHDVVEP-----ILL--EVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih  186 (335)
                      +|+|||||||||||++|+++|++.|++|++++|+.........  ..+....++++.+|+.|.     ++.  ++|+|||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            5799999999999999999999999999999997633221111  112235788999999775     456  8999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKR  264 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (335)
                      +|+.               .|+.++.+++++|++.+ + +||+ |   +||..    .+|.     .+..+...|+.+|+
T Consensus        90 ~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~-----~~~~p~~~y~~sK~  141 (346)
T 3i6i_A           90 TVGG---------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRA-----DPVEPGLNMYREKR  141 (346)
T ss_dssp             CCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTC-----CCCTTHHHHHHHHH
T ss_pred             CCch---------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCcc-----CcCCCcchHHHHHH
Confidence            9974               38899999999999999 7 5654 4   45422    2333     45566688999999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.    .+++++++||+.+||....    .+... ......++.+.++++++..++|+|++|+|+
T Consensus       142 ~~e~~l~~----~g~~~tivrpg~~~g~~~~----~~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~  203 (346)
T 3i6i_A          142 RVRQLVEE----SGIPFTYICCNSIASWPYY----NNIHP-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGK  203 (346)
T ss_dssp             HHHHHHHH----TTCCBEEEECCEESSCCCS----CC------CCCCSSCEEEETTSCCCEEEECHHHHHH
T ss_pred             HHHHHHHH----cCCCEEEEEecccccccCc----ccccc-ccccCCCceEEEccCCCceEEecCHHHHHH
Confidence            99998865    5899999999999996531    11111 112225667888999999999999999974

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.88  E-value=7.5e-23  Score=182.63  Aligned_cols=165  Identities=17%  Similarity=0.066  Sum_probs=125.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--------CCCceEEEeccccchh--------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--------RNPRFELIRHDVVEPI--------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~--------  177 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.....+......        ...++.++.+|+.+..        
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999997543221111110        1146788999998751        


Q ss_pred             ----ccCC-CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCC
Q 019794          178 ----LLEV-DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       178 ----~~~v-D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~  242 (335)
                          +..+ |+||||||......    ..+++...+++|+.|+.++++++.+.    +  .+||++||...+.       
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------  157 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------  157 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------
Confidence                2345 99999999754332    22356789999999999999987653    3  4899999976542       


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                               +..+...|+.+|.+.+.+++.++.+   .|++++++|||.++++..
T Consensus       158 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  203 (264)
T 2pd6_A          158 ---------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT  203 (264)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred             ---------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence                     2234468999999999999999877   689999999999999853

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.88  E-value=1.3e-21  Score=167.63  Aligned_cols=146  Identities=15%  Similarity=0.169  Sum_probs=116.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |+|+||||||+||++++++|+++|++|++++|+.......     ....++++.+|+.++     .+.++|+|||+||..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            7999999999999999999999999999999975433211     134678899998774     467899999999864


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLT  270 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~  270 (335)
                      ..    .++   .++|+.++.+++++|++.++ +||++||..+|+.....           + .+...|+.+|..+|.++
T Consensus        79 ~~----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~-----------~-~~~~~y~~~K~~~e~~~  139 (206)
T 1hdo_A           79 ND----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-----------P-PRLQAVTDDHIRMHKVL  139 (206)
T ss_dssp             TC----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-----------C-GGGHHHHHHHHHHHHHH
T ss_pred             CC----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-----------c-ccchhHHHHHHHHHHHH
Confidence            33    122   25899999999999999887 89999999988643211           1 14468999999999988


Q ss_pred             HHHHhhhCCcEEEEEeCcee
Q 019794          271 MDYHRGAGVEVRIARIFNTY  290 (335)
Q Consensus       271 ~~~a~~~~i~~~ivRp~~v~  290 (335)
                      +    +.+++++++||+.++
T Consensus       140 ~----~~~i~~~~lrp~~~~  155 (206)
T 1hdo_A          140 R----ESGLKYVAVMPPHIG  155 (206)
T ss_dssp             H----HTCSEEEEECCSEEE
T ss_pred             H----hCCCCEEEEeCCccc
Confidence            4    368999999999973

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.88  E-value=1.5e-22  Score=182.93  Aligned_cols=165  Identities=15%  Similarity=0.075  Sum_probs=127.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc---cCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~------------~  177 (335)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....+.....   .....+.++.+|+.++            .
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            457789999999999999999999999999999998533222222111   1235788899999875            2


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +.++|+||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+              
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~--------------  167 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL--------------  167 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT--------------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccc--------------
Confidence            3479999999997554432    2356789999999999999987    33444 89999998765              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       168 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  213 (281)
T 3v2h_A          168 --VASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL  213 (281)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             --cCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence              233345689999999999999999874   8999999999999875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.88  E-value=1.5e-22  Score=180.98  Aligned_cols=167  Identities=14%  Similarity=0.074  Sum_probs=118.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.+..            +
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3467889999999999999999999999999999998654322211111 01246788899987651            1


Q ss_pred             -cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 -LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 -~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                       .++|+||||||......    ..+++...+++|+.++.++++++    ++.+ .++|++||...+.             
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------  156 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-------------  156 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc-------------
Confidence             57999999999654322    22356778999999999999988    3444 4999999987652             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                         +......|+.+|++.+.+++.++.+.   |++++++|||.++++..
T Consensus       157 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  202 (266)
T 1xq1_A          157 ---SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA  202 (266)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence               22334789999999999999998774   89999999999999853

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.88  E-value=7.7e-22  Score=175.80  Aligned_cols=163  Identities=19%  Similarity=0.188  Sum_probs=125.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+...+.  ...+.++.+|+.++            .+.+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457889999999999999999999999999999999866443332222  34678899999875            1247


Q ss_pred             CCEEEEccCCCCCCCc--------cCChhhHHhhHHHHHHHHHHHHHHc----------C-CeEEEEecccccCCCCCCC
Q 019794          181 VDQIYHLACPASPVHY--------KYNPVKTIKTNVMGTLNMLGLAKRV----------G-AKFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~----------~-~r~v~iSS~~v~~~~~~~~  241 (335)
                      +|+||||||.......        .+++...+++|+.|+.++++++.+.          + .++|++||...+.      
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~------  155 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD------  155 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH------
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc------
Confidence            9999999997643321        2457789999999999999988653          2 3799999987662      


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                                +......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       156 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  200 (257)
T 3tpc_A          156 ----------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM  200 (257)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred             ----------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence                      3334578999999999999999887   58999999999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.88  E-value=1.4e-21  Score=174.47  Aligned_cols=160  Identities=18%  Similarity=0.146  Sum_probs=128.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ..++|+||||||+|+||++++++|+++|++|++++|+.....        ...+.++.+|+.++.            +.+
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            356789999999999999999999999999999999754322        236888999998752            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++    ++.+. ++|++||...+..              .
T Consensus        97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------------~  162 (260)
T 3un1_A           97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP--------------M  162 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC--------------B
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC--------------C
Confidence            9999999997654332    2356788999999999999987    34454 8999999766532              1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                      +..+...|+.+|++.+.+++.++.+.   |+++++++||.|+++..
T Consensus       163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  208 (260)
T 3un1_A          163 VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH  208 (260)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTS
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCC
Confidence            22344689999999999999999886   89999999999999853

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.88  E-value=2.9e-22  Score=178.01  Aligned_cols=192  Identities=10%  Similarity=0.033  Sum_probs=137.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC-CCCCcccccccc--CCCceEEEeccccchh-----c-------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF-FTGRKDNLVHHF--RNPRFELIRHDVVEPI-----L-------  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~-~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~-------  178 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+ ..... .....+  ...++.++.+|+.++.     +       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID-ETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999997 33222 111111  1346888999998751     2       


Q ss_pred             cCCCEEEEccCC-CCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC------CeEEEEecccccCCCCCCCCC
Q 019794          179 LEVDQIYHLACP-ASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG------AKFLLTSTSEVYGDPLEHPQK  243 (335)
Q Consensus       179 ~~vD~Vih~A~~-~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~------~r~v~iSS~~v~~~~~~~~~~  243 (335)
                      .++|+||||||. ......    .+.+...+++|+.++.++++++.+    .+      .++|++||...+..       
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------  156 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence            379999999986 322221    224677899999999999887642    22      58999999766531       


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGD  320 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~  320 (335)
                              +..+...|+.+|.+.|.+++.++.+.   |++++++|||.++++....    ....+...+.++.+      
T Consensus       157 --------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~------  218 (258)
T 3afn_B          157 --------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD----KTQDVRDRISNGIP------  218 (258)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT----CCHHHHHHHHTTCT------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc----cCHHHHHHHhccCC------
Confidence                    22344689999999999999988775   8999999999999985321    12333344443322      


Q ss_pred             CCceeeceeccccc
Q 019794          321 GKQTRSFQYVSDLV  334 (335)
Q Consensus       321 g~~~~~~v~v~Dva  334 (335)
                         ...+++++|+|
T Consensus       219 ---~~~~~~~~dva  229 (258)
T 3afn_B          219 ---MGRFGTAEEMA  229 (258)
T ss_dssp             ---TCSCBCGGGTH
T ss_pred             ---CCcCCCHHHHH
Confidence               23577888876

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.88  E-value=1.8e-22  Score=181.92  Aligned_cols=171  Identities=18%  Similarity=0.060  Sum_probs=130.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC--------ccccc---cc--cCCCceEEEeccccchh-
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR--------KDNLV---HH--FRNPRFELIRHDVVEPI-  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~~-  177 (335)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+....        .+.+.   ..  ....++.++.+|+.++. 
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            356789999999999999999999999999999999873211        11110   00  11357889999998751 


Q ss_pred             -----------ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHH----c--CCeEEEEecccccCCCCCC
Q 019794          178 -----------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEVYGDPLEH  240 (335)
Q Consensus       178 -----------~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~r~v~iSS~~v~~~~~~~  240 (335)
                                 +..+|+||||||........+++...+++|+.|+.++++++..    .  +.+||++||...+....  
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  166 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--  166 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--
Confidence                       2479999999997655444567889999999999999998743    2  24899999976652110  


Q ss_pred             CCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                                .+......|+.+|++.+.+++.++.+.   |+++++++||.|+++..
T Consensus       167 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  213 (278)
T 3sx2_A          167 ----------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI  213 (278)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             ----------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence                      111234579999999999999998774   79999999999999863

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=6.5e-23  Score=175.82  Aligned_cols=144  Identities=17%  Similarity=0.196  Sum_probs=116.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc---cCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL---LEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~vD~Vih~A  188 (335)
                      |+|+||||+|+||++++++|+ +|++|++++|+..                .+.+|+.++     .+   .++|+|||+|
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~a   66 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVSAT   66 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEECC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEECC
Confidence            489999999999999999999 9999999998643                355676654     22   3589999999


Q ss_pred             CCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHH
Q 019794          189 CPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE  261 (335)
Q Consensus       189 ~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (335)
                      |........    +++...+++|+.++.++++++.+.   +.++|++||...+.                +..+...|+.
T Consensus        67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y~~  130 (202)
T 3d7l_A           67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----------------PIVQGASAAM  130 (202)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----------------CCTTCHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----------------CCCccHHHHH
Confidence            965433222    245678899999999999999876   45899999986652                3344578999


Q ss_pred             HHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          262 GKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       262 sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                      +|...|.+++.++.+.  |++++++|||.++++.
T Consensus       131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence            9999999999998764  8999999999999873

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.88  E-value=3.4e-22  Score=176.96  Aligned_cols=181  Identities=17%  Similarity=0.096  Sum_probs=134.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++|+++||||+|+||++++++|+++|++|+++++......+.....+  ...++.++.+|+.++            .+.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999998875432222222111  234678899999875            1247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .++++..+++|+.|+.++++++    ++.+. ++|++||...+.                
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV----------------  146 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----------------
Confidence            9999999997544332    2356789999999999999988    44454 899999976652                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCe
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPM  315 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~  315 (335)
                      +..+...|+.+|.+.+.+++.++.+   .|+++++++||.|+++...    .....+...+..+.++
T Consensus       147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~p~  209 (246)
T 3osu_A          147 GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD----ALSDELKEQMLTQIPL  209 (246)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS----CSCHHHHHHHHTTCTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc----ccCHHHHHHHHhcCCC
Confidence            2334578999999999999999885   4899999999999987532    2223444444444443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.88  E-value=6.4e-22  Score=176.85  Aligned_cols=165  Identities=13%  Similarity=0.080  Sum_probs=127.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC--CCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR--NPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------~  178 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+.......  ..++.++.+|+.++.            +
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999999875432211111100  246788999998751            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+.              
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  149 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ--------------  149 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC--------------
Confidence            47999999999754332    223567899999999999998874    3444 899999988763              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++.+   .|+++++++||.|+++.
T Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  194 (263)
T 3ai3_A          150 --PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD  194 (263)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence              2233468999999999999999887   58999999999999974

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.88  E-value=5.5e-22  Score=175.23  Aligned_cols=157  Identities=16%  Similarity=0.172  Sum_probs=119.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      ++|+|+||||+|+||++++++|+++  |++|++++|+...... +     ...+.++.+|+.+.     .+.++|+|||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----GGEADVFIGDITDADSINPAFQGIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            5789999999999999999999999  8999999996432211 1     23567888888774     46789999999


Q ss_pred             cCCCCCCC-------------ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          188 ACPASPVH-------------YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       188 A~~~~~~~-------------~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ||......             ..+.+...+++|+.++.+++++|++.+. +||++||..++...             .+.
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~-------------~~~  143 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD-------------HPL  143 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT-------------CGG
T ss_pred             ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC-------------Ccc
Confidence            98643211             1123345789999999999999999887 89999998765211             111


Q ss_pred             CC--CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          254 GE--RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       254 ~~--~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      .+  ...|+.+|..+|.+++.    .+++++++||+.+||+..
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCS
T ss_pred             ccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCc
Confidence            11  13588899999998753    689999999999999863

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.88  E-value=2.8e-22  Score=182.19  Aligned_cols=167  Identities=17%  Similarity=0.094  Sum_probs=130.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~  177 (335)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|+.....+......  ...++.++.+|+.++            .
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999997654433222211  124788999999875            2


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+||||||.......    .+++...+++|+.|+.++++++.    +.+ .+||++||...+.             
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~-------------  183 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV-------------  183 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT-------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc-------------
Confidence            3579999999997554332    23577899999999999999873    444 4999999976421             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+++.++.+   .|+++++++||.|+++.
T Consensus       184 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  229 (293)
T 3rih_A          184 --TGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG  229 (293)
T ss_dssp             --BBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             --CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence              12233468999999999999999887   48999999999999864

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.87  E-value=9.9e-22  Score=176.68  Aligned_cols=168  Identities=17%  Similarity=0.173  Sum_probs=128.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ...++|+|+||||+|+||++++++|+++|++|++++|+................+.++.+|+.++.            +.
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346788999999999999999999999999999999864322211111111236889999998752            23


Q ss_pred             CCCEEEEccCCCCCC--C----ccCChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ++|+||||||.....  .    ..+++...+++|+.++.++++++.+.    +. +||++||..+|...           
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  160 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-----------  160 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-----------
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-----------
Confidence            799999999965321  1    12356789999999999999988663    44 89999998877421           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                          ..+...|+.+|.+.|.+++.++.+   .|++++++|||.++|+..
T Consensus       161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (278)
T 2bgk_A          161 ----EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL  205 (278)
T ss_dssp             ----TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCC
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhh
Confidence                013467999999999999999876   589999999999999864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.87  E-value=2e-22  Score=181.71  Aligned_cols=168  Identities=15%  Similarity=0.154  Sum_probs=125.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACP  190 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~  190 (335)
                      +|+|||||||||++++++|+++  |++|++++|+...... +    ....++++.+|+.++     ++.++|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~----~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-L----AAQGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-H----HHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-h----hcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999999  9999999997543221 1    123577889998774     56789999999974


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ..            ..|+.++.+++++|++.++ +||++||..+|.               .+    ..|+.+|..+|.+
T Consensus        76 ~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------------~~----~~y~~sK~~~e~~  124 (286)
T 2zcu_A           76 EV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT---------------SP----LGLADEHIETEKM  124 (286)
T ss_dssp             ------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---------------CC----STTHHHHHHHHHH
T ss_pred             Cc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---------------Cc----chhHHHHHHHHHH
Confidence            20            2588999999999999887 899999988761               11    3699999999998


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++.    .+++++++||+.++++.         ..++....+++.+. +++++..++|+|++|+|+
T Consensus       125 ~~~----~~~~~~ilrp~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~  176 (286)
T 2zcu_A          125 LAD----SGIVYTLLRNGWYSENY---------LASAPAALEHGVFI-GAAGDGKIASATRADYAA  176 (286)
T ss_dssp             HHH----HCSEEEEEEECCBHHHH---------HTTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHH
T ss_pred             HHH----cCCCeEEEeChHHhhhh---------HHHhHHhhcCCcee-ccCCCCccccccHHHHHH
Confidence            864    58999999998766542         12233334444444 577788899999999873

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.87  E-value=2.8e-23  Score=178.60  Aligned_cols=155  Identities=14%  Similarity=0.187  Sum_probs=121.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hcc---CCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILL---EVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~---~vD~Vih~A  188 (335)
                      |+|+||||+|+||++++++|+++  +|++++|+...... .......   .++.+|+.++     .+.   ++|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~-~~~~~~~---~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAE-LAREVGA---RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHH-HHHHHTC---EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHH-HHHhccC---cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999999999998  99999986432221 1111111   7788888775     233   899999999


Q ss_pred             CCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHH
Q 019794          189 CPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       189 ~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      |......    ..+++...+++|+.++.++++++++.+. +||++||..+|.                +..+...|+.+|
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y~~sK  138 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV----------------QVPGFAAYAAAK  138 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH----------------SSTTBHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc----------------CCCCcchHHHHH
Confidence            9654322    2345778999999999999999966554 899999988773                334457899999


Q ss_pred             HHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          264 RTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       264 ~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+.|.+++.++.+   .|++++++|||.++++.
T Consensus       139 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          139 GALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             HHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            9999999999887   59999999999999874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.87  E-value=3.8e-21  Score=170.63  Aligned_cols=156  Identities=19%  Similarity=0.165  Sum_probs=122.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+....      .   ..+..+.+|+.++.            +.+
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------Q---YPFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS------C---CSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------c---CCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999875421      1   12677888987751            247


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.++.++++++    ++.+ .++|++||...+                .
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~----------------~  138 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH----------------T  138 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT----------------S
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhC----------------C
Confidence            999999999754332    22357789999999999999987    3344 499999998775                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  183 (250)
T 2fwm_X          139 PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM  183 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence            33445789999999999999998774   8999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=1e-21  Score=175.57  Aligned_cols=167  Identities=16%  Similarity=0.078  Sum_probs=129.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.  ....++.++.+|+.++.            
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999754332222111  12257889999998751            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +.++|+||||||.......    .+++...+++|+.|+.++++++.+.    + .++|++||.....             
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  152 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI-------------  152 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-------------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-------------
Confidence            3479999999997544332    2356778999999999999987654    4 4999999975421             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+++.++.+   .|+++++++||.|+++.
T Consensus       153 --~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  198 (262)
T 3pk0_A          153 --TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG  198 (262)
T ss_dssp             --BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             --CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence              12234468999999999999999988   58999999999999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.87  E-value=5.7e-22  Score=176.91  Aligned_cols=173  Identities=16%  Similarity=0.064  Sum_probs=128.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+............  ...++.++.+|+.++.            
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            34667899999999999999999999999999999996543322211110  1346888999997751            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +..+|+||||||.......    .+++...+++|+.++.++++++.+.    +  .+||++||...+......    .  
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~--  163 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L--  163 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T--
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----c--
Confidence            2459999999997544322    2346778999999999999987543    2  489999997765321100    0  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         .+..+...|+.+|++.+.+++.++.+.   |++++++|||.|+++.
T Consensus       164 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (265)
T 1h5q_A          164 ---NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ  209 (265)
T ss_dssp             ---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             ---cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence               122335789999999999999998764   8999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.87  E-value=1.8e-21  Score=175.17  Aligned_cols=165  Identities=13%  Similarity=0.029  Sum_probs=128.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh-----------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI-----------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----------~~  179 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|... ..+..... .....+.++.+|+.+..           ..
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            4577899999999999999999999999999999996532 11111111 12356888999998752           24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+                
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~----------------  169 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSF----------------  169 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhc----------------
Confidence            79999999997654332    23577899999999999999873    3444 89999998776                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       170 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  215 (273)
T 3uf0_A          170 QGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN  215 (273)
T ss_dssp             SCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            23344578999999999999999987   58999999999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1.8e-21  Score=173.97  Aligned_cols=163  Identities=15%  Similarity=0.019  Sum_probs=126.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+....... ...+. ..+.++.+|+.++.            +.+
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAV-VAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999875432211 11111 25778889997751            237


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+.    +  .++|++||...+.               
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  151 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV---------------  151 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc---------------
Confidence            9999999997543322    2356789999999999999987542    3  5899999987652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.++++.
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (263)
T 3ak4_A          152 -GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM  196 (263)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence             22334689999999999999998774   8999999999998864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.87  E-value=9.7e-22  Score=177.46  Aligned_cols=167  Identities=17%  Similarity=0.084  Sum_probs=128.3

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc----CCCceEEEeccccchh---------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEPI---------  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~---------  177 (335)
                      .+.+++|+++||||+|+||++++++|+++|++|++++|+.....+......    ....+.++.+|+.++.         
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999987543322211111    1126888999998751         


Q ss_pred             ---ccCCCEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCC
Q 019794          178 ---LLEVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       178 ---~~~vD~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                         +.++|+||||||.... ..    ..+++...+++|+.|+.++++++.+.    + .+||++||...+.         
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  156 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN---------  156 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS---------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC---------
Confidence               3479999999996322 11    22356789999999999999987542    3 3899999987762         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                             +......|+.+|.+.+.+++.++.++   |+++++++||.|+++.
T Consensus       157 -------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  201 (281)
T 3svt_A          157 -------THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL  201 (281)
T ss_dssp             -------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             -------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence                   33445789999999999999999875   6999999999999874

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.87  E-value=1.2e-22  Score=184.72  Aligned_cols=183  Identities=18%  Similarity=0.171  Sum_probs=133.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      +|+|+||||||+||++++++|+++| ++|++++|+......   ..+....++++.+|+.++     ++.++|+|||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA---KELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            4799999999999999999999999 999999997653211   111124578889998775     5678999999996


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      ...        ....+.|+.++.+++++|++.++ +||++|+..+|+...      .        .+...|+.+|..+|.
T Consensus        82 ~~~--------~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~--------~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           82 YWE--------SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------G--------RLAAAHFDGKGEVEE  139 (299)
T ss_dssp             HHH--------HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------T--------SCCCHHHHHHHHHHH
T ss_pred             CCc--------cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------C--------cccCchhhHHHHHHH
Confidence            321        01245789999999999999987 899988877774211      0        123679999999999


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHH-HhCCCeE-EecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQA-IRRQPMT-VYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~-~~~~~~~-~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++.    .+++++++||+.+||+...        .++... ..+.... .+..++..++|+|++|+|+
T Consensus       140 ~~~~----~gi~~~ilrp~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~  196 (299)
T 2wm3_A          140 YFRD----IGVPMTSVRLPCYFENLLS--------HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGP  196 (299)
T ss_dssp             HHHH----HTCCEEEEECCEEGGGGGT--------TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHH
T ss_pred             HHHH----CCCCEEEEeecHHhhhchh--------hcCCcccCCCCEEEEEecCCCCccceecHHHHHH
Confidence            8865    5899999999999997421        111111 1232222 2344677889999999873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.87  E-value=2.3e-21  Score=175.22  Aligned_cols=172  Identities=15%  Similarity=0.222  Sum_probs=124.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~  190 (335)
                      |+|||||||||||++++++|++. |++|++++|+......     +....++++.+|+.|+     ++.++|+|||+|+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            58999999999999999999998 9999999997653322     1235788999999875     57889999999975


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      ...          ...|+.++.+++++|++.++ +||++||....   .      .     .+.    .+...+..+|..
T Consensus        76 ~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---~------~-----~~~----~~~~~~~~~e~~  127 (289)
T 3e48_A           76 IHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---H------N-----NPF----HMSPYFGYASRL  127 (289)
T ss_dssp             CCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---T------T-----CCS----TTHHHHHHHHHH
T ss_pred             Ccc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---C------C-----CCC----ccchhHHHHHHH
Confidence            321          13589999999999999997 89999994321   0      0     111    122222334444


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +    .+.+++++++||+.+||+.         ..++..+..+.. ..++.++..++|+|++|+|+
T Consensus       128 ~----~~~g~~~~ilrp~~~~~~~---------~~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~  179 (289)
T 3e48_A          128 L----STSGIDYTYVRMAMYMDPL---------KPYLPELMNMHK-LIYPAGDGRINYITRNDIAR  179 (289)
T ss_dssp             H----HHHCCEEEEEEECEESTTH---------HHHHHHHHHHTE-ECCCCTTCEEEEECHHHHHH
T ss_pred             H----HHcCCCEEEEecccccccc---------HHHHHHHHHCCC-EecCCCCceeeeEEHHHHHH
Confidence            3    3469999999999999973         233444444333 34567888999999999974

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.87  E-value=1.5e-21  Score=174.19  Aligned_cols=164  Identities=14%  Similarity=0.037  Sum_probs=127.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c-
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L-  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~-  178 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            + 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999998754322211111 01346788999998751            2 


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+.              
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  151 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--------------  151 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--------------
Confidence            579999999997543221    23567899999999999999884    3444 899999987652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.++++
T Consensus       152 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (260)
T 2ae2_A          152 --AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS  195 (260)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence              22344689999999999999998875   899999999999876

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.87  E-value=1.5e-21  Score=172.86  Aligned_cols=163  Identities=18%  Similarity=0.111  Sum_probs=125.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+...........  ....++.++.+|+.++.            +.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998754322111111  01246888999998751            2379


Q ss_pred             CEEEEccCCCCCCC-------ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          182 DQIYHLACPASPVH-------YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       182 D~Vih~A~~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      |+||||||......       ..+++...+++|+.++.++++++.    +.+. ++|++||...+.              
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------------  147 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV--------------  147 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc--------------
Confidence            99999999754322       123567889999999988877664    3454 899999987653              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                        +..+...|+.+|.+.+.+++.++.+.   |++++++|||.++++..
T Consensus       148 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  193 (250)
T 2cfc_A          148 --AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMT  193 (250)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTT
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcc
Confidence              22345689999999999999998775   89999999999999863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.87  E-value=2.7e-21  Score=171.48  Aligned_cols=162  Identities=17%  Similarity=0.152  Sum_probs=123.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+. ....+.+..  ...++.++.+|+.++.            +.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN--LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999975 222221111  1246788999998751            357


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+.                
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----------------  146 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----------------
Confidence            9999999997543322    2356789999999999888874    44454 899999987763                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.|.++.
T Consensus       147 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  191 (249)
T 2ew8_A          147 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  191 (249)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence            23345689999999999999998874   8999999999998874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.87  E-value=1.9e-21  Score=171.51  Aligned_cols=162  Identities=18%  Similarity=0.144  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQI  184 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~V  184 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+...... +....  ...+++.+|+.++.        +.++|+|
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS-LVREC--PGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            3567899999999999999999999999999999986432221 11111  24567788987752        2369999


Q ss_pred             EEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||||.......    .+++...+++|+.++.++++++.+.    +  .++|++||...+.                +..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~  144 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AVT  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCT
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc----------------CCC
Confidence            999996543322    2346789999999999999887653    4  3899999987663                233


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +...|+.+|++.|.+++.++.+   .++++++++||.++++.
T Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~  186 (244)
T 3d3w_A          145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence            4578999999999999999877   48999999999999975

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.87  E-value=1.9e-21  Score=173.70  Aligned_cols=162  Identities=17%  Similarity=0.110  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----h-------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I-------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~-------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+.. ..+. ..+.++.+|+.++     .       +.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA-AELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998754322211 1111 2477888999775     1       2379


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||.......    .+++...+++|+.|+.++++++    ++.+. ++|++||...+.                +
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  146 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------------G  146 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC----------------C
Confidence            999999997543322    2356789999999998777665    34454 899999987762                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ..+...|+.+|.+.+.+++.++.+   .|+++++++||.++++.
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (260)
T 1nff_A          147 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM  190 (260)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence            233468999999999999999877   58999999999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.87  E-value=6.9e-22  Score=176.30  Aligned_cols=166  Identities=14%  Similarity=0.091  Sum_probs=123.2

Q ss_pred             CCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------
Q 019794          110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       110 ~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------  177 (335)
                      ..+..++|+++||||+|+||++++++|+++|++|++++|+.....+... .+ ...+.++.+|+.+..            
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG-EI-GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            3456788999999999999999999999999999999997543322222 11 346888999997751            


Q ss_pred             ccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---------CCeEEEEecccccCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---------GAKFLLTSTSEVYGDPLEHPQK  243 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---------~~r~v~iSS~~v~~~~~~~~~~  243 (335)
                      +.++|+||||||......     ..+++...+++|+.++.++++++.+.         +.++|++||...+         
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~---------  151 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG---------  151 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT---------
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc---------
Confidence            247999999999754222     22356788999999999998887432         2269999997665         


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                             .+......|+.+|++.+.+++.++.+   .++++++++||.+.++.
T Consensus       152 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  197 (261)
T 3n74_A          152 -------RPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPL  197 (261)
T ss_dssp             -------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred             -------CCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChh
Confidence                   23344567999999999999999987   48999999999998874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.87  E-value=1.5e-21  Score=177.21  Aligned_cols=166  Identities=14%  Similarity=0.129  Sum_probs=131.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~  177 (335)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.....+.....  ....++.++.+|+.++            .
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999754322222211  1235788899999875            1


Q ss_pred             ccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          178 LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      +..+|+||||||......     ..+++...+++|+.|+.++++++.+.   +.+||++||...+.              
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------  188 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE--------------  188 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH--------------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC--------------
Confidence            347999999999654322     23457889999999999999999764   34899999987763              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       189 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  233 (291)
T 3ijr_A          189 --GNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL  233 (291)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence              23344689999999999999999875   8999999999998873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=6.6e-21  Score=167.27  Aligned_cols=185  Identities=17%  Similarity=0.176  Sum_probs=138.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vi  185 (335)
                      ++||+++||||+++||++++++|+++|++|++++|+.+.....     ...++..+.+|++++        .+.++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----RHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999999999999999999999976544322     235678889999876        457799999


Q ss_pred             EccCCCCCCC--ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          186 HLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       186 h~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      ||||...+..  ..++|++.+++|+.|+..+.+++..    .+.++|++||....                .+......|
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~----------------~~~~~~~~Y  147 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST----------------FGSADRPAY  147 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT----------------SCCSSCHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc----------------CCCCCCHHH
Confidence            9999754322  2236888999999999999887643    34599999997654                233344689


Q ss_pred             HHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCC
Q 019794          260 DEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDG  321 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  321 (335)
                      +.||.....+.+.++.++   ||+++.|.||.|..|-......  -....+.+.+..|+..++.+
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~--~~~~~~~~~~~~PlgR~g~p  210 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA--DVEATRRIMQRTPLARWGEA  210 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC--CHHHHHHHHHTCTTCSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC--CHHHHHHHHhcCCCCCCcCH
Confidence            999999999999999874   8999999999998764211111  12334455555555444443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.87  E-value=5.3e-22  Score=175.36  Aligned_cols=165  Identities=13%  Similarity=0.017  Sum_probs=124.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+............  ....+.++.+|+.++.            +
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999996432221111100  1246788999987751            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||......    ..+++...+++|+.++.++++++    ++.+. +||++||...+.              
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------  149 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT--------------  149 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH--------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC--------------
Confidence            37999999999654322    12356788999999998777765    34454 899999975442              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++.+.   ++++++++||.++++.
T Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~  194 (248)
T 2pnf_A          150 --GNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM  194 (248)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence              11234679999999999999988764   8999999999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.87  E-value=1.8e-21  Score=173.25  Aligned_cols=168  Identities=15%  Similarity=0.077  Sum_probs=127.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.++.            +.
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999998754322111111 01346889999998752            23


Q ss_pred             CCCEEEEccCCCC-CCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPAS-PVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~-~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ++|+||||||... ....    .+++...+++|+.++.++++++.+    .+. ++|++||...+..             
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------  156 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV-------------  156 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc-------------
Confidence            7999999999654 2221    224577899999999999998764    344 8999999766521             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                       .+..+...|+.+|.+.|.+++.++.+   .|++++++|||.++++..
T Consensus       157 -~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  203 (260)
T 3awd_A          157 -NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT  203 (260)
T ss_dssp             -CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred             -CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence             12222368999999999999999887   689999999999999863

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.87  E-value=4e-21  Score=172.43  Aligned_cols=158  Identities=16%  Similarity=0.106  Sum_probs=125.9

Q ss_pred             CCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------h
Q 019794          110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       110 ~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      ....+++|+||||||+|+||++++++|+++|++|++++|+.....         .....+.+|+.++            .
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHHH
Confidence            455678999999999999999999999999999999998654321         2456788898775            1


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+||||||.......    .+++...+++|+.|+.++++++..    .+. +||++||...+.             
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------  145 (269)
T 3vtz_A           79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA-------------  145 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-------------
Confidence            3479999999997554332    234677899999999999998654    344 899999987763             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                         +......|+.+|.+.+.+++.++.+.  ++++++++||.|+++
T Consensus       146 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~  188 (269)
T 3vtz_A          146 ---ATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP  188 (269)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence               33445789999999999999999887  899999999999886

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.87  E-value=1.4e-21  Score=174.88  Aligned_cols=167  Identities=14%  Similarity=0.057  Sum_probs=129.3

Q ss_pred             CCCCCCCeEEEEcCCc-hhHHHHHHHHHhCCCeEEEEecCCCCCcccccc--ccCCCceEEEeccccchh----------
Q 019794          111 GIGRRRLRIVVTGGAG-FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVVEPI----------  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG-~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~----------  177 (335)
                      ....++|+++||||+| +||++++++|+++|++|++++|+.....+....  .....++.++.+|+.++.          
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            3346789999999997 699999999999999999999975433222211  112357899999998751          


Q ss_pred             --ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----CC-eEEEEecccccCCCCCCCCCCC
Q 019794          178 --LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----GA-KFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 --~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~-r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                        +..+|+||||||.......    .+++...+++|+.++.++++++...     +. ++|++||...+           
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-----------  165 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW-----------  165 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT-----------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc-----------
Confidence              2479999999997554332    2356789999999999999987653     33 79999997765           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           .+..+...|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       166 -----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  211 (266)
T 3o38_A          166 -----RAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF  211 (266)
T ss_dssp             -----CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             -----CCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence                 23345578999999999999999887   58999999999998764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=3.1e-21  Score=170.78  Aligned_cols=160  Identities=15%  Similarity=0.056  Sum_probs=125.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~Vi  185 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+. . .  ..++.++.+|+.++.        +.++|+||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~-~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-E-K--YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG-G-G--STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H-h--ccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            4678999999999999999999999999999999875432221 1 1  126788899998752        45799999


Q ss_pred             EccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC-C
Q 019794          186 HLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG-E  255 (335)
Q Consensus       186 h~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~-~  255 (335)
                      ||||.......    .+++...+++|+.++.++++++.+    .+. ++|++||...+.                +.. .
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~  143 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV----------------KGVVN  143 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT----------------BCCTT
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc----------------CCCCC
Confidence            99997544322    235678899999999999998753    344 899999976652                112 3


Q ss_pred             CChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ...|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       144 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  184 (246)
T 2ag5_A          144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence            4689999999999999998774   8999999999999974

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.86  E-value=8.6e-22  Score=174.40  Aligned_cols=163  Identities=16%  Similarity=0.085  Sum_probs=120.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc----cCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL----LEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~----~~vD~Vih  186 (335)
                      ||+||||||+||||++++++|+++|++|++++|+......            .+.+|+.+.     .+    .++|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            4689999999999999999999999999999997543211            145666543     22    38999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCC-CCCCcCC-C--------CC
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHP-QKETYWG-N--------VN  251 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~-~~E~~~~-~--------~~  251 (335)
                      |||....   ..++...+++|+.++.++++++.+.    + .++|++||..+|+...... ..|..+. +        ..
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           69 CAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence            9986432   3468899999999999999987664    4 4899999998886431110 0000000 0        00


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|.+.|.+++.++.+   .+++++++|||.++|+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~  190 (255)
T 2dkn_A          146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL  190 (255)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence            0124468999999999999998876   59999999999999974

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.86  E-value=3.7e-21  Score=172.36  Aligned_cols=161  Identities=15%  Similarity=0.151  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.+...+     .....+.++.+|+.++            .+.+
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-----LNLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-----TCCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----hhcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4567899999999999999999999999999999986432221     1223678899999875            1247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.    +.+ .+||++||...+                .
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~----------------~  151 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK----------------K  151 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT----------------S
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhC----------------C
Confidence            9999999997544332    23567889999999999887764    344 499999998776                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                      +......|+.+|.+.+.+++.++.+   .|+++++++||.|.++..
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (266)
T 3p19_A          152 TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELL  197 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGG
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchh
Confidence            3344578999999999999999887   489999999999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=1.3e-21  Score=176.14  Aligned_cols=164  Identities=13%  Similarity=0.059  Sum_probs=124.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----cCCCceEEEeccccch-----h-------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEP-----I-------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~-----~-------  177 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+.....    ....++.++.+|+.++     .       
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999754322111111    1123678899999875     1       


Q ss_pred             ccCCCEEEEccCCCCCCC--------ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccc-cCCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEV-YGDPLEHPQKE  244 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v-~~~~~~~~~~E  244 (335)
                      +.++|+||||||......        ..+++...+++|+.|+.++++++.+.    +.++|++||... +.         
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------  154 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------  154 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc---------
Confidence            237999999999654322        23356788999999999999987653    569999999765 42         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                             +......|+.+|.+.+.+++.++.+   .|+++++++||.|+++.
T Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  199 (278)
T 1spx_A          155 -------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  199 (278)
T ss_dssp             -------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence                   2234467999999999999998876   48999999999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.86  E-value=3.8e-21  Score=170.85  Aligned_cols=160  Identities=17%  Similarity=0.134  Sum_probs=125.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCC-CccccccccCCCceEEEeccccch-h------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEP-I------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-~------------~  178 (335)
                      +++|+|+||||+|+||++++++|+++|++ |++++|+... ..+.+.......++.++.+|+.++ .            +
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            56789999999999999999999999996 9999987532 111122222234678899999864 1            2


Q ss_pred             cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|+||||||..    ..+++...+++|+.|+.++++++.+.        +.++|++||...+.               
T Consensus        83 g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  143 (254)
T 1sby_A           83 KTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN---------------  143 (254)
T ss_dssp             SCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred             CCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc---------------
Confidence            3799999999863    23578899999999999999988642        23799999987762               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          144 -AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             -CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence             2334468999999999999998876   58999999999999863

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.86  E-value=2.5e-21  Score=172.29  Aligned_cols=161  Identities=17%  Similarity=0.137  Sum_probs=123.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ..+ ...+.++.+|+.++.            +.++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-REL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999998753322211 111 235778889987751            2379


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGL----AKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~----a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||......    ..+++...+++|+.|+.+++++    +++.+. +||++||...+.                +
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  144 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------G  144 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----------------C
Confidence            99999999754322    2235678999999999866554    444554 999999987652                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+.   |+++++++||.++++
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1hdc_A          145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence            2344689999999999999998774   899999999999885

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.86  E-value=1.5e-21  Score=172.85  Aligned_cols=165  Identities=14%  Similarity=0.031  Sum_probs=122.1

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCC
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVD  182 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD  182 (335)
                      ....++|+||||||+|+||++++++|+++|++|++++|+.....+.. ..+ ...+.++.+|+.+.        ...++|
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG-NAL-KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHh-ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            44567899999999999999999999999999999998654322211 111 24678888998765        224799


Q ss_pred             EEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||......    ..+++...+++|+.|+.++++++..    .+. +||++||...+.                +.
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  150 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA----------------GN  150 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------------------CC
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc----------------CC
Confidence            9999999754322    3456889999999999999887743    343 899999987652                33


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  193 (249)
T 3f9i_A          151 PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM  193 (249)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence            44578999999999999999876   48999999999998875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.86  E-value=3.2e-21  Score=173.42  Aligned_cols=166  Identities=14%  Similarity=0.082  Sum_probs=126.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.++.            +
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467889999999999999999999999999999999754322211111 01346788999997751            2


Q ss_pred             -cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 -LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 -~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                       .++|+||||||.......    .+++...+++|+.++.++++++.    +.+ .+||++||...+.             
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  163 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-------------  163 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC-------------
Confidence             679999999997543322    23567889999999999999874    334 4899999987763             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       164 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (273)
T 1ae1_A          164 ---ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL  208 (273)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence               22344689999999999999998775   8999999999999985

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.86  E-value=2.2e-21  Score=174.85  Aligned_cols=162  Identities=17%  Similarity=0.071  Sum_probs=128.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+.....  ...+.++.+|+.++.            +.+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999998754332222221  346788999998762            347


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+    .+. +||++||...+                .
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~----------------~  167 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQ----------------V  167 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT----------------S
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc----------------c
Confidence            9999999997644332    335778999999999999998754    333 89999997765                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+   .|+++++++||.|+++
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  211 (277)
T 3gvc_A          168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP  211 (277)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence            3344578999999999999999877   4899999999999886

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.86  E-value=6.6e-21  Score=170.53  Aligned_cols=153  Identities=18%  Similarity=0.155  Sum_probs=124.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+|+||||+|+||++++++|+++|++|++++|+...          ..++.++.+|+.++.            +.++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999986543          235678889987751            2479


Q ss_pred             CEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||......    ..+++...+++|+.|+.++++++.+.    + .+||++||...+.                +
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  139 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----------------I  139 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc----------------C
Confidence            99999999754332    22357789999999999999987642    3 4899999987762                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhhC--CcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~~--i~~~ivRp~~v~Gp  292 (335)
                      ..+...|+.+|.+.+.+++.++.+.+  +++++++||.+.++
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~  181 (264)
T 2dtx_A          140 TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP  181 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence            33457899999999999999998765  99999999999775

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.86  E-value=1.7e-21  Score=173.52  Aligned_cols=165  Identities=16%  Similarity=0.133  Sum_probs=129.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999998754332211111 12357888999998752            2


Q ss_pred             cCCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|+||||||.......   .++++..+++|+.|+.++++++.    +.+. ++|++||...+                
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~----------------  151 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE----------------  151 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT----------------
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc----------------
Confidence            479999999997654332   23577899999999999999874    3343 89999998765                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|.+.+.+++.++.+.   |+++++++||.|.++
T Consensus       152 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~  196 (256)
T 3gaf_A          152 NTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD  196 (256)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCc
Confidence            233445789999999999999999874   899999999999876

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.86  E-value=4.6e-21  Score=171.11  Aligned_cols=163  Identities=19%  Similarity=0.207  Sum_probs=127.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.....+... .+ ..++.++.+|+.++.            +.+
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-KL-GNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4678899999999999999999999999999999997654332221 11 246888999997751            237


Q ss_pred             CCEEEEccCCCCCCC----------ccCChhhHHhhHHHHHHHHHHHHHHc----------CC-eEEEEecccccCCCCC
Q 019794          181 VDQIYHLACPASPVH----------YKYNPVKTIKTNVMGTLNMLGLAKRV----------GA-KFLLTSTSEVYGDPLE  239 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~~----------~~-r~v~iSS~~v~~~~~~  239 (335)
                      +|+||||||......          ..+++...+++|+.++.++++++.+.          +. +||++||...+.    
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----  162 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----  162 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC----
Confidence            999999999754322          22346789999999999999998764          44 899999987762    


Q ss_pred             CCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                                  +......|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       163 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  207 (265)
T 2o23_A          163 ------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL  207 (265)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence                        2234468999999999999998876   38999999999998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.86  E-value=3.1e-21  Score=173.92  Aligned_cols=163  Identities=18%  Similarity=0.146  Sum_probs=128.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+.... . ..++..+.+|+.++            .+.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE-I-GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-h-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999999875432222221 1 34678899999875            124


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++.+    .+. +||++||...+                
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------  164 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT----------------  164 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT----------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC----------------
Confidence            79999999997544332    235678899999999999988743    333 89999998776                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++
T Consensus       165 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  209 (277)
T 4dqx_A          165 SAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP  209 (277)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence            334455789999999999999998875   899999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.86  E-value=5.8e-21  Score=170.18  Aligned_cols=164  Identities=10%  Similarity=0.038  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++            .+.+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999999754332221111 1234688899999875            1247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH-----Hc-CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK-----RV-GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~-----~~-~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.     +. +.++|++||...+                
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------  147 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW----------------  147 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc----------------
Confidence            9999999996543322    23577899999999999999873     33 2489999998765                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++.+    .|+++++++||.|+++.
T Consensus       148 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~  194 (257)
T 3imf_A          148 DAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG  194 (257)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence            23344568999999999999998865    38999999999999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.86  E-value=3.1e-21  Score=171.88  Aligned_cols=163  Identities=16%  Similarity=0.084  Sum_probs=125.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN-FFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++| +.... +.....+  ....+.++.+|+.++.            +
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA-NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999998 43221 1111111  1246788899997751            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .++|+||||||.......    .+++...+++|+.++.++++++.+.    +  .+||++||...+              
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~--------------  149 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK--------------  149 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc--------------
Confidence            379999999997543222    2356788999999999998876543    3  499999997665              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        .+..+...|+.+|.+.+.+++.++.+.   +++++++|||.++++.
T Consensus       150 --~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  195 (261)
T 1gee_A          150 --IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence              233445789999999999999988764   8999999999999974

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.86  E-value=4.6e-21  Score=171.20  Aligned_cols=163  Identities=15%  Similarity=0.054  Sum_probs=124.6

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      .+.+++|+||||||+|+||++++++|+++|++|++++|+.....+.+..    ..+.++.+|+.++            .+
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----AGAVALYGDFSCETGIMAFIDLLKTQT   97 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----HTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----cCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4557789999999999999999999999999999999976543222221    2367889999875            13


Q ss_pred             cCCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|+||||||.......   .+++...+++|+.|+.++++++..    .+ .++|++||...+                
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~----------------  161 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR----------------  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG----------------
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc----------------
Confidence            479999999996544332   234667999999999999998754    23 489999998766                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+.  ++++++++||.|.++.
T Consensus       162 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~  206 (260)
T 3gem_A          162 KGSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP  206 (260)
T ss_dssp             TCCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence            233445789999999999999999876  5999999999998764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.86  E-value=6.3e-22  Score=180.57  Aligned_cols=163  Identities=17%  Similarity=0.086  Sum_probs=127.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|+|+||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.+..            +.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            57889999999999999999999999999999999754332221111 12357889999998751            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++..    .+  .+||++||...+                
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----------------  172 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL----------------  172 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT----------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc----------------
Confidence            9999999997644332    235678999999999999998743    33  489999998765                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.||.+.+.+++.++.+.   |+++++++||.|..+
T Consensus       173 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  217 (301)
T 3tjr_A          173 VPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK  217 (301)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence            233455789999999999999998774   899999999999765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.86  E-value=3.5e-21  Score=175.29  Aligned_cols=166  Identities=13%  Similarity=0.009  Sum_probs=126.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|+............  ...++.++.+|+.+..            
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999987543221111110  0346889999998752            


Q ss_pred             ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR-----VG-AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~-~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +..+|+||||||......    ..+++...+++|+.++.++++++.+     .+ .++|++||...+.            
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~------------  169 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET------------  169 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc------------
Confidence            246899999999644322    2235678999999999999888753     23 3899999987652            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                          +..+...|+.+|++.+.+++.++.+   .|++++++|||.+++++
T Consensus       170 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          170 ----GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  214 (302)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence                2234568999999999999999887   68999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=6.5e-21  Score=169.73  Aligned_cols=158  Identities=18%  Similarity=0.176  Sum_probs=123.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+...  +.....+.  . .++.+|+.++            .+.++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999997654  22222222  3 7788998775            12479


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||.......    .+++...+++|+.|+.++++++.+    .+. ++|++||...+.                +
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  142 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------A  142 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------B
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC----------------C
Confidence            999999997544332    224678999999999999998754    344 899999976642                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|++.+.+++.++.+.   |+++++++||.+.++
T Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  185 (256)
T 2d1y_A          143 EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  185 (256)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence            2334689999999999999998774   899999999999764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.86  E-value=2.8e-21  Score=175.32  Aligned_cols=175  Identities=14%  Similarity=0.069  Sum_probs=134.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------ccCCCEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------LLEVDQI  184 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~vD~V  184 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+...........  ..++.++.+|+.+..        +.++|+|
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--AGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--SSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--cCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            467889999999999999999999999999999999754333222211  357889999998752        2468999


Q ss_pred             EEccCCCCCCC--ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-CCCCCCcCCCCCCCCCCChHH
Q 019794          185 YHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE-HPQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       185 ih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~-~~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      |||||...+..  ..++++..+++|+.|+.++++++.+... ++|++||...+..... ....+.    ..+..+...|+
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~----~~~~~~~~~Y~  166 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWR----SRRYSPWLAYS  166 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCS----SSCCCHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccccccc----ccCCCCcchHH
Confidence            99999765332  3456889999999999999999988765 8999999877643211 111111    13445557899


Q ss_pred             HHHHHHHHHHHHHHhhh---C--CcEEEEEeCceeCCC
Q 019794          261 EGKRTAETLTMDYHRGA---G--VEVRIARIFNTYGPR  293 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~---~--i~~~ivRp~~v~Gp~  293 (335)
                      .||++.+.+++.++.+.   |  +++++++||.|..+.
T Consensus       167 ~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~  204 (291)
T 3rd5_A          167 QSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL  204 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence            99999999999998775   4  999999999998764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.86  E-value=2.4e-21  Score=171.38  Aligned_cols=166  Identities=11%  Similarity=-0.009  Sum_probs=128.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+........... ....++.++.+|+.++.            ..
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999999754322211111 11357888999998751            24


Q ss_pred             CCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+||||||......    ..+++...+++|+.++.++++++.+    .+. ++|++||...+.               
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA---------------  146 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc---------------
Confidence            6999999999765433    2235678999999999999988744    333 899999976652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                       +......|+.+|.+.+.+++.++.+   .|+++++++||.|.++..
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  192 (247)
T 3lyl_A          147 -GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT  192 (247)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccc
Confidence             3334578999999999999999876   489999999999988753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.86  E-value=1.2e-21  Score=174.94  Aligned_cols=167  Identities=17%  Similarity=0.188  Sum_probs=126.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|......+.+.+..  ...++.++.+|+.++.            +
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999886543322222221  1246889999998751            2


Q ss_pred             cCCCEEEEccCCC--CCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPA--SPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~--~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .++|+||||||..  ....    ..+++...+++|+.|+.++++++    ++.+. ++|++||...++.           
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------  152 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA-----------  152 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC-----------
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc-----------
Confidence            4799999999942  2222    12356788999999999999987    44554 8999998755421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       153 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  198 (264)
T 3i4f_A          153 ---PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM  198 (264)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence               23344578999999999999999887   58999999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.86  E-value=6.8e-21  Score=171.57  Aligned_cols=166  Identities=14%  Similarity=0.104  Sum_probs=126.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+.........++.++.+|+.++.            +.
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            346788999999999999999999999999999999875432221111111126788889997751            24


Q ss_pred             CCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-----CeEEEEecccccCCCCCCCCCCCc
Q 019794          180 EVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-----AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-----~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ++|+||||||......    ..+++...+++|+.|+.++++++.+    .+     .+||++||...+..          
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~----------  174 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA----------  174 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC----------
Confidence            7999999999654432    2235678999999999988887642    23     48999999877631          


Q ss_pred             CCCCCCCCCCC-hHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERS-CYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~-~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            ..... .|+.+|.+.+.+++.++.+.   |+++++++||.+.++.
T Consensus       175 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  219 (276)
T 2b4q_A          175 ------MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM  219 (276)
T ss_dssp             ------CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred             ------CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence                  12234 79999999999999998774   8999999999998874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=2.6e-21  Score=173.31  Aligned_cols=165  Identities=13%  Similarity=0.105  Sum_probs=129.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.....+...+..  ...++.++.+|+.++.            
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999997543322211110  2357889999998762            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +.++|+||||||.......    .+++...+++|+.++.++++++.+    .+  .++|++||...+             
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-------------  162 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL-------------  162 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc-------------
Confidence            2479999999997654332    234678999999999999988743    22  489999998776             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         .+......|+.+|.+.+.+++.++.+.   |+++++++||.|.++
T Consensus       163 ---~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  207 (266)
T 4egf_A          163 ---APLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE  207 (266)
T ss_dssp             ---SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred             ---cCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence               233445789999999999999999874   899999999999876

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.86  E-value=5.1e-21  Score=169.72  Aligned_cols=165  Identities=17%  Similarity=0.043  Sum_probs=125.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCce-EEEeccccchh-----------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF-ELIRHDVVEPI-----------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~-----------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+........ ..+ ...+ .++.+|+.+..           +.+
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA-QEL-GAAVAARIVADVTDAEAMTAAAAEAEAVAP   85 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-cccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence            467789999999999999999999999999999999754322111 111 1245 78889987751           257


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||........    +++...+++|+.|+.++++++.    +.+. +||++||...+..              .
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------~  151 (254)
T 2wsb_A           86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV--------------N  151 (254)
T ss_dssp             CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------C
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC--------------C
Confidence            99999999975443222    2457789999999888877653    3444 8999999876532              1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +..+...|+.+|++.|.+++.++.+.   |++++++|||.++++.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~  196 (254)
T 2wsb_A          152 RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM  196 (254)
T ss_dssp             SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence            22233689999999999999998775   8999999999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.86  E-value=2.8e-21  Score=174.81  Aligned_cols=165  Identities=12%  Similarity=-0.031  Sum_probs=124.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+............ ...++.++.+|+.++.            +.
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999998876432221111110 1346788999997751            24


Q ss_pred             CCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||......    ..+++...+++|+.|+.++++++.    +.+. +||++||...+.               
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  185 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT---------------  185 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc---------------
Confidence            7999999999754332    223567889999999888888765    3454 899999976552               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       186 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  230 (285)
T 2c07_A          186 -GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  230 (285)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence             22234679999999999999998764   8999999999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.86  E-value=3.3e-21  Score=172.64  Aligned_cols=166  Identities=16%  Similarity=0.149  Sum_probs=125.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc---ccCCCceEEEeccccchh-----------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HFRNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~-----------  177 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+....   .....++.++.+|+.++.           
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            346788999999999999999999999999999999975432211111   111356888999998751           


Q ss_pred             -ccCCCEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCc
Q 019794          178 -LLEVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                       +.++|+||||||.... ..    ..+++...+++|+.|+.++++++    ++.+ .+||++||...+.           
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  157 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-----------  157 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-----------
Confidence             2479999999997543 22    22357789999999999777665    3444 4999999987652           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.+|.+.+.+++.++.+   .|+++++++||.++++.
T Consensus       158 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          158 -----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             -----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             -----CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence                 2234468999999999999998876   48999999999998763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.86  E-value=2.2e-21  Score=172.72  Aligned_cols=164  Identities=18%  Similarity=0.180  Sum_probs=130.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ..+ ..++.++.+|+.++            .+..
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR-EEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            357889999999999999999999999999999998754322211 111 24678899999875            2347


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|+||||||......    ..+++...+++|+.|+.++++++.+.   +.++|++||...+.                +.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  146 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG----------------GH  146 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS----------------BC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC----------------CC
Confidence            999999999765433    23357789999999999999998764   24899999987652                33


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                      .....|+.+|.+.+.+++.++.+.   |+++++++||.|.++..
T Consensus       147 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  190 (255)
T 4eso_A          147 PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTK  190 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSST
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccc
Confidence            445789999999999999999874   89999999999998753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.86  E-value=6.1e-21  Score=172.15  Aligned_cols=166  Identities=19%  Similarity=0.125  Sum_probs=129.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC--------ccccc---cc--cCCCceEEEeccccch---
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR--------KDNLV---HH--FRNPRFELIRHDVVEP---  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~---  176 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+....        .+.+.   ..  ....++.++.+|+.++   
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            46789999999999999999999999999999999974321        11110   00  1235788899999875   


Q ss_pred             ---------hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCC
Q 019794          177 ---------ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPL  238 (335)
Q Consensus       177 ---------~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~  238 (335)
                               .+.++|+||||||.......    .+++...+++|+.|+.++++++.    +.+ .++|++||...+    
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----  162 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH----  162 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG----
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc----
Confidence                     13479999999997654332    23577899999999999999863    334 389999998776    


Q ss_pred             CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                                  .+......|+.+|.+.+.+++.++.+   +|+++++++||.|+++..
T Consensus       163 ------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  209 (281)
T 3s55_A          163 ------------SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT  209 (281)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred             ------------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence                        23344578999999999999999987   489999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.86  E-value=3.3e-21  Score=171.34  Aligned_cols=162  Identities=20%  Similarity=0.203  Sum_probs=125.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+ ....+ ..++.++.+|+.++.            +..+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999986533221 11111 246788999998752            2468


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |+||||||.......    .+++...+++|+.++.++++++.+    .+.+||++||...+.                +.
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  145 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------PI  145 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------CC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC----------------CC
Confidence            999999997543322    235678999999999888776543    345899999987762                33


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.+.+.+++.++.+.     |+++++++||.++++.
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          146 EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence            345689999999999999998773     8999999999999863

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.86  E-value=4e-21  Score=171.41  Aligned_cols=164  Identities=12%  Similarity=0.037  Sum_probs=125.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC---CCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR---NPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~------------~  178 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+.....+.   ..++.++.+|+.++.            +
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999875430111111111   246788899998752            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||......    ..+++...+++|+.|+.++++++.+    .+ .+||++||...+.              
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  147 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------  147 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc--------------
Confidence            47999999999754332    2235678999999999999988743    34 4999999987652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.|.++.
T Consensus       148 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T 1x1t_A          148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL  192 (260)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence              22344689999999999999998774   8999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.86  E-value=4.8e-21  Score=172.80  Aligned_cols=163  Identities=14%  Similarity=0.034  Sum_probs=126.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .++|++|||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.++.            +..
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999754332222111 12357888999998752            347


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH------cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR------VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~------~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+      .+. +||++||...+               
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~---------------  166 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK---------------  166 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGT---------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhc---------------
Confidence            9999999997654332    234678899999999999998755      343 89999998765               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|.+.+.+++.++.+   .|+++++++||.|.++
T Consensus       167 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  211 (279)
T 3sju_A          167 -QGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP  211 (279)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred             -cCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence             23344578999999999999999987   4899999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.86  E-value=7.2e-21  Score=169.28  Aligned_cols=161  Identities=13%  Similarity=0.008  Sum_probs=124.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+..   +.....+  ...++.++.+|+.++.            +.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999998754   1111111  1246788889987751            23


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+.               
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  143 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV---------------  143 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc---------------
Confidence            79999999997543322    2356789999999888877765    45554 899999987652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       +......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (255)
T 2q2v_A          144 -GSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL  188 (255)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence             22334689999999999999998874   7999999999998874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.86  E-value=3.2e-21  Score=173.47  Aligned_cols=162  Identities=18%  Similarity=0.128  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCCCcccccccc---CCCceEEEeccccch----h--------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN-FFTGRKDNLVHHF---RNPRFELIRHDVVEP----I--------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~D~~~~----~--------  177 (335)
                      +++|+++||||+|+||++++++|+++|++|++++| +.....+ ....+   ...++.++.+|+.+.    .        
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQR-LVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHH-HHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            46789999999999999999999999999999998 5332211 11111   024678889998775    2        


Q ss_pred             ----ccCCCEEEEccCCCCCCCc----c-----------CChhhHHhhHHHHHHHHHHHHHHc---C-------CeEEEE
Q 019794          178 ----LLEVDQIYHLACPASPVHY----K-----------YNPVKTIKTNVMGTLNMLGLAKRV---G-------AKFLLT  228 (335)
Q Consensus       178 ----~~~vD~Vih~A~~~~~~~~----~-----------~~~~~~~~~Nv~gt~~ll~~a~~~---~-------~r~v~i  228 (335)
                          +.++|+||||||.......    .           +++...+++|+.|+.++++++.+.   +       .+||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                2379999999996543322    1           456679999999999999998763   2       489999


Q ss_pred             ecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       229 SS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ||...+.                +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++
T Consensus       168 sS~~~~~----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          168 CDAMTDL----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             CCGGGGS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             CchhhcC----------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            9987762                33345689999999999999998775   899999999999998

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.86  E-value=7.3e-21  Score=175.24  Aligned_cols=165  Identities=18%  Similarity=0.126  Sum_probs=123.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc----cccc--CCCceEEEeccccchh----------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL----VHHF--RNPRFELIRHDVVEPI----------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~----~~~~--~~~~~~~~~~D~~~~~----------  177 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+...+....    ....  ...++.++.+|++++.          
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999754332211    1110  1356889999998751          


Q ss_pred             --ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          178 --LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 --~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                        +.++|+||||||.......    .+++...+++|+.|+.++++++    ++.+. ++|++||...+..          
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------  152 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------  152 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------
Confidence              2479999999996543332    2356788999999999999988    44554 8999999876521          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.||.+.|.+++.++.+   .|+++++|+||.|.++.
T Consensus       153 -----~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          153 -----TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             -----CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence                 1122367999999999999999987   48999999999998653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.85  E-value=3.8e-21  Score=173.71  Aligned_cols=166  Identities=16%  Similarity=0.096  Sum_probs=127.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~  177 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+.....+  ...++.++.+|+.+.            .
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999987533212111111  134678889998765            1


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc--C-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV--G-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~--~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +.++|+||||||.......    .+++...+++|+.|+.++++++.+.  + .++|++||...+..              
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------  170 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK--------------  170 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS--------------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC--------------
Confidence            3479999999997543322    2357789999999999999999875  3 49999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       .......|+.+|.+.+.+++.++.+   .|+++++++||.|.++
T Consensus       171 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          171 -AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             -SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence             1112468999999999999999876   4899999999999886

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.85  E-value=5.1e-21  Score=172.46  Aligned_cols=165  Identities=15%  Similarity=0.066  Sum_probs=126.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+...... ...++.++.+|+.++.            +.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999997543221111110 1246788999997751            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc------C-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV------G-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~------~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++.+.      + .+||++||...+.             
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~-------------  165 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ-------------  165 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc-------------
Confidence            79999999997543322    2346789999999999999987654      4 4899999976542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       166 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          166 ---GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence               22344689999999999999998774   7999999999998863

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=6.5e-21  Score=170.88  Aligned_cols=167  Identities=16%  Similarity=0.079  Sum_probs=126.7

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh-----------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----------  177 (335)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+...........  .....+.++.+|+.++.           
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999998754322211110  01246778899998751           


Q ss_pred             -ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEeccc-ccCCCCCCCCCCCc
Q 019794          178 -LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSE-VYGDPLEHPQKETY  246 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~-v~~~~~~~~~~E~~  246 (335)
                       +.++|+||||||.......    .+++...+++|+.|+.++++++.+    .+ .+||++||.. .+            
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------  163 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE------------  163 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC------------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc------------
Confidence             2479999999997543322    234678899999999999988743    33 3899999976 32            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                          .+......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       164 ----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  209 (267)
T 1vl8_A          164 ----VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM  209 (267)
T ss_dssp             ----CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred             ----cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence                12234468999999999999999877   48999999999998864

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.85  E-value=5.3e-21  Score=168.70  Aligned_cols=163  Identities=12%  Similarity=0.057  Sum_probs=125.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCCCccccccc-cCCCceEEEeccccchh----------
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI----------  177 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------  177 (335)
                      +|+|+||||+|+||++++++|+++|+       +|++++|+........... ....++.++.+|+.++.          
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       9999998643222111111 01346888999998751          


Q ss_pred             --ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          178 --LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 --~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                        +.++|+||||||......    ..+++...+++|+.++.++++++.+    .+. +||++||...+.           
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  150 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK-----------  150 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC-----------
Confidence              247999999999754332    2235678899999999999998743    344 899999987763           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                           +..+...|+.+|.+.+.+++.++.+   .|++++++|||.++++..
T Consensus       151 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  196 (244)
T 2bd0_A          151 -----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW  196 (244)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh
Confidence                 3344578999999999999888765   489999999999999853

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.85  E-value=4.1e-21  Score=171.28  Aligned_cols=165  Identities=16%  Similarity=0.039  Sum_probs=126.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+..... .....+..+.+|+.++.            +.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999999754322111111 01246778889987651            24


Q ss_pred             CCCEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ++|+||||||.... ..    ..+++...+++|+.++.++++++.    +.+. +||++||...+.              
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  156 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH--------------  156 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC--------------
Confidence            79999999996431 11    223567899999999999998874    3444 899999988763              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.+.++.
T Consensus       157 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (260)
T 2zat_A          157 --PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF  201 (260)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence              33445689999999999999998774   8999999999998874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.85  E-value=2.2e-21  Score=173.30  Aligned_cols=164  Identities=13%  Similarity=0.036  Sum_probs=126.3

Q ss_pred             CCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------
Q 019794          113 GRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       113 ~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------  177 (335)
                      .+++|+++||||+  |+||++++++|+++|++|++++|+.. ..+.+.+.. ....+.++.+|+.++.            
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            3567899999999  99999999999999999999998753 111111110 0123678899998751            


Q ss_pred             ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +.++|+||||||....    ..    ..+++...+++|+.|+.++++++.+.   +.+||++||...+.           
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  152 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK-----------  152 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-----------
Confidence            2379999999996542    11    23357789999999999999999765   34899999976652           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       153 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  197 (261)
T 2wyu_A          153 -----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA  197 (261)
T ss_dssp             -----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence                 22334679999999999999998875   8999999999999975

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.85  E-value=5.6e-21  Score=172.37  Aligned_cols=166  Identities=17%  Similarity=0.108  Sum_probs=128.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC---------cc---ccccc--cCCCceEEEeccccchh-
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR---------KD---NLVHH--FRNPRFELIRHDVVEPI-  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~---------~~---~~~~~--~~~~~~~~~~~D~~~~~-  177 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|.....         .+   .....  ....++.++.+|+.++. 
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46789999999999999999999999999999999853210         11   11111  12356788999998751 


Q ss_pred             -----------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c--CCeEEEEecccccCC
Q 019794          178 -----------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEVYGD  236 (335)
Q Consensus       178 -----------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~r~v~iSS~~v~~~  236 (335)
                                 +.++|+||||||.......    .++++..+++|+.|+.++++++..    .  +.+||++||...+  
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--  169 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL--  169 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT--
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc--
Confidence                       3479999999997654332    235678999999999999998743    3  3489999998765  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                                    .+......|+.+|.+.+.+++.++.+   .|+++++++||.|+++..
T Consensus       170 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  216 (280)
T 3pgx_A          170 --------------KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI  216 (280)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence                          23344578999999999999999987   589999999999999863

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.85  E-value=7.3e-21  Score=171.98  Aligned_cols=168  Identities=14%  Similarity=0.062  Sum_probs=127.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~  178 (335)
                      +..++|+++||||+|+||++++++|+++|++|++++|+.....+...... ...++.++.+|+.++            .+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34567899999999999999999999999999999997543322221111 234688899999875            23


Q ss_pred             cCCCEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .++|+||||||.... ..    ..+++...+++|+.|+.++++++    ++.+. ++|++||...+..            
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~------------  171 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT------------  171 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB------------
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC------------
Confidence            479999999997533 11    22357789999999999999987    44444 9999999765421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       172 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  217 (283)
T 3v8b_A          172 --FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI  217 (283)
T ss_dssp             --CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence              12334568999999999999999987   47999999999998874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=9e-21  Score=169.70  Aligned_cols=165  Identities=14%  Similarity=0.058  Sum_probs=129.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc---ccCCCceEEEeccccch------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HFRNPRFELIRHDVVEP------------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------------  176 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+....   .....++..+.+|+.++            
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999975433222111   12234588999999875            


Q ss_pred             hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcC
Q 019794          177 ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .+..+|+||||||.......    .+++...+++|+.++.++++++...    + .+||++||...+             
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------------  150 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS-------------  150 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT-------------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC-------------
Confidence            23479999999997544332    2357789999999999999988542    3 379999997765             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         .+......|+.+|.+.+.+++.++.+.   |+++++++||.|.++
T Consensus       151 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  195 (265)
T 3lf2_A          151 ---QPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG  195 (265)
T ss_dssp             ---SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             ---CCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence               233445789999999999999999875   899999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.85  E-value=1.8e-21  Score=171.65  Aligned_cols=161  Identities=14%  Similarity=0.046  Sum_probs=121.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCcccccccc--CCCceEEEeccccchh------------ccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+..... .....+  ...++.++.+|+.++.            +.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999985 56532211 111111  1246788899997751            237


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.++.++++++.+.    +. +||++||...+.                
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  143 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC----------------
Confidence            999999999754332    22356778999999999999987653    44 899999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+   .|+++++++||.++++.
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (244)
T 1edo_A          144 GNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             CCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence            1223467999999999999998877   48999999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.85  E-value=1.1e-20  Score=164.15  Aligned_cols=147  Identities=14%  Similarity=0.220  Sum_probs=112.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCC-CCccccccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFT-GRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      +|+|+||||+|+||++++++|+ +.|++|++++|+.. ...+..   .....+.++.+|+.++     .+.++|+|||+|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a   81 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA   81 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence            4569999999999999999999 89999999999754 222110   0235788999999875     567899999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC-hHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS-CYDEGKRTA  266 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~  266 (335)
                      |..               |+. +.++++++++.+. +||++||..+|+.....   ...|..    .... .|+.+|..+
T Consensus        82 g~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~---~~~~~~----~~~~~~y~~~K~~~  138 (221)
T 3r6d_A           82 MES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA---LEKWTF----DNLPISYVQGERQA  138 (221)
T ss_dssp             CCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH---HHHHHH----HTSCHHHHHHHHHH
T ss_pred             CCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc---cccccc----cccccHHHHHHHHH
Confidence            742               455 8999999999886 89999999888642211   000100    0112 799999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      |.+++.    .+++++++|||.++++
T Consensus       139 e~~~~~----~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          139 RNVLRE----SNLNYTILRLTWLYND  160 (221)
T ss_dssp             HHHHHH----SCSEEEEEEECEEECC
T ss_pred             HHHHHh----CCCCEEEEechhhcCC
Confidence            998854    6999999999999997

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.85  E-value=4.4e-21  Score=169.99  Aligned_cols=162  Identities=17%  Similarity=0.147  Sum_probs=127.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+.....  ..++..+.+|+.++.            +.+
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            457889999999999999999999999999999998754332222221  356788899998751            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++    ++.+  .++|++||...+.               
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  145 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA---------------  145 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH---------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc---------------
Confidence            9999999997544332    2357789999999999999884    4444  3899999976652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++.+   .|+++++++||.|..+
T Consensus       146 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  189 (247)
T 3rwb_A          146 -GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD  189 (247)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence             3334578999999999999999987   5899999999999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=5.2e-21  Score=172.61  Aligned_cols=165  Identities=14%  Similarity=0.047  Sum_probs=126.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccC-CC---ceEEEeccccchh------------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFR-NP---RFELIRHDVVEPI------------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~------------  177 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+....... ..   ++.++.+|+.++.            
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999975432221111111 12   6888999998751            


Q ss_pred             ccCCCEEEEccCCCCCCC--------ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +..+|+||||||......        ..+++...+++|+.++.++++++.+.    +.++|++||...+...        
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  155 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--------  155 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--------
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC--------
Confidence            247999999999754322        12346789999999999999987642    3689999998765311        


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                             ......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       156 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          156 -------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             -------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence                   133468999999999999999876   48999999999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.85  E-value=1e-21  Score=173.21  Aligned_cols=162  Identities=10%  Similarity=0.020  Sum_probs=118.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCccccccc-cCCCceEE-Eeccccchh------------ccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHH-FRNPRFEL-IRHDVVEPI------------LLE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~-~~~D~~~~~------------~~~  180 (335)
                      ||+|+||||+|+||++++++|+++|++|+++ +|+........... .....+.. +.+|+.+..            +.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 66533221111110 01234555 888987751            347


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.|+.++++++    ++.+. +||++||...+.                
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  144 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL----------------  144 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc----------------
Confidence            999999999754322    22356788999999966666554    44554 899999975542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   +++++++|||.++++.
T Consensus       145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  189 (245)
T 2ph3_A          145 GNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM  189 (245)
T ss_dssp             CCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence            11234679999999999999998775   8999999999999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=1e-20  Score=166.99  Aligned_cols=168  Identities=12%  Similarity=-0.024  Sum_probs=124.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCCCceEEEeccccchh-----c-------c-
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----L-------L-  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-------~-  179 (335)
                      ++|+|+||||+|+||++++++|+++|  ++|++++|+...... +... ...++.++.+|+.++.     +       . 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999  999999997554322 2221 2457889999998751     1       2 


Q ss_pred             -CCCEEEEccCCCC-CCC----ccCChhhHHhhHHHHHHHHHHHHHHc----------------CCeEEEEecccccCCC
Q 019794          180 -EVDQIYHLACPAS-PVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----------------GAKFLLTSTSEVYGDP  237 (335)
Q Consensus       180 -~vD~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----------------~~r~v~iSS~~v~~~~  237 (335)
                       ++|+||||||... ...    ..+++...+++|+.++.++++++.+.                ..+||++||...+...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999999755 222    22346788999999999999887542                3489999998665322


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ..    +.     .+..+...|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       160 ~~----~~-----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (250)
T 1yo6_A          160 NT----SG-----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             CC----ST-----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             cc----cc-----cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence            10    00     122345789999999999999998875   8999999999998864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.85  E-value=2.5e-21  Score=171.85  Aligned_cols=164  Identities=16%  Similarity=0.098  Sum_probs=113.0

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------  177 (335)
                      .+.+++|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.++.            
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999998754332221111 12356888999998751            


Q ss_pred             ccCCCEEEEccCCCCCCC-------ccCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVH-------YKYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~-------~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +.++|+||||||......       ..+++...+++|+.|+.++++++    ++.+. +||++||...|.          
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  153 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----------  153 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC----------
Confidence            247999999999732111       22356789999999977777765    33444 899999987652          


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                               ....|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       154 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  195 (253)
T 3qiv_A          154 ---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA  195 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence                     12469999999999999999885   7999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.85  E-value=6.7e-21  Score=170.98  Aligned_cols=166  Identities=14%  Similarity=0.056  Sum_probs=128.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|......+.....+  ....+.++.+|+.++.            
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999885332222221111  2346888999998751            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|+||||||.......    .+++...+++|+.|+.++++++.+    .+ .+||++||...+.             
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------  170 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM-------------  170 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH-------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-------------
Confidence            2479999999997654332    235778999999999999998743    33 4899999976652             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       171 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  215 (269)
T 4dmm_A          171 ---GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM  215 (269)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence               2234468999999999999999886   48999999999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.85  E-value=1.3e-20  Score=166.99  Aligned_cols=164  Identities=15%  Similarity=0.085  Sum_probs=126.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.........+. ....++.++.+|+.++.            +.+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999998754322111111 01346788999998751            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+    .+.++|++||...+.                +
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  148 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV----------------N  148 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTC----------------C
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcC----------------C
Confidence            9999999997543322    234678899999999999998753    236899999977652                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+.+.++.+.   |+++++++||.+.++.
T Consensus       149 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          149 VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence            3344689999999999999988764   8999999999998864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.85  E-value=8.3e-21  Score=170.10  Aligned_cols=155  Identities=20%  Similarity=0.155  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.......          ..+.+|+.+.            .+.+
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~----------~~~~~Dv~~~~~~~~~~~~~~~~~g~   94 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD----------LHLPGDLREAAYADGLPGAVAAGLGR   94 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS----------EECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh----------hccCcCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999999865433221          2235676654            2357


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++    ++.+. ++|++||...+                .
T Consensus        95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~----------------~  158 (266)
T 3uxy_A           95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL----------------R  158 (266)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------------B
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC----------------C
Confidence            9999999997654332    2356788999999999999987    44444 99999998765                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       159 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  203 (266)
T 3uxy_A          159 PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM  203 (266)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence            33455789999999999999998875   8999999999998863

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.85  E-value=1.5e-20  Score=169.40  Aligned_cols=168  Identities=18%  Similarity=0.043  Sum_probs=129.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +.
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999999999755433221111 12346788999998751            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ++|+||||||.......    .++++..+++|+.|+.++++++.+    .+  .++|++||...+..             
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~-------------  175 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII-------------  175 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc-------------
Confidence            79999999997654432    235677889999999999998754    22  48999999766421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                       ........|+.+|.+.+.+++.++.+   .|+++++++||.|..+..
T Consensus       176 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  222 (276)
T 3r1i_A          176 -NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV  222 (276)
T ss_dssp             -CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence             11123467999999999999999987   589999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.6e-20  Score=168.73  Aligned_cols=168  Identities=20%  Similarity=0.142  Sum_probs=130.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      ..+++|+++||||+|+||++++++|+++|++|+++++......+.....+  ...++.++.+|+.++.            
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999775432222222111  2356788999998751            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +.++|+||||||.......    .+++...+++|+.|+.++++++.+.   +.++|++||.....               
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~---------------  171 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL---------------  171 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC---------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc---------------
Confidence            2479999999997554332    2357889999999999999998765   34899999864421               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                      .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++..
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  218 (271)
T 3v2g_A          172 VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN  218 (271)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSS
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcc
Confidence            123445789999999999999999875   89999999999998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.85  E-value=4.8e-21  Score=169.83  Aligned_cols=164  Identities=15%  Similarity=0.075  Sum_probs=128.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +..++|+++||||+|+||++++++|+++|++|++++|+.....+... .+ ......+.+|+.++            .+.
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-YL-GDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HH-GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            34678999999999999999999999999999999987543322111 11 12467888999875            134


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++.+    .+. ++|++||...+                
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~----------------  146 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT----------------  146 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH----------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc----------------
Confidence            79999999997654332    335778999999999999998754    343 89999997665                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++.+.   |+++++++||.|..+.
T Consensus       147 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  192 (248)
T 3op4_A          147 MGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM  192 (248)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence            233445789999999999999998874   8999999999998875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.85  E-value=8e-21  Score=171.15  Aligned_cols=164  Identities=12%  Similarity=0.056  Sum_probs=128.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~~  178 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+...+.  ....++.++.+|+.++            .+
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999754332222111  1135688999999876            13


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----c-CCeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----V-GAKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~-~~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||......    ..+++...+++|+.|+.++++++..    . +.+||++||...+.              
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  169 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR--------------  169 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH--------------
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--------------
Confidence            47999999999654332    2235778999999999999998743    2 34899999976652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  213 (277)
T 4fc7_A          170 --GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT  213 (277)
T ss_dssp             --TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence              23344689999999999999999874   899999999999886

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.85  E-value=3.1e-21  Score=173.36  Aligned_cols=166  Identities=14%  Similarity=0.051  Sum_probs=129.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+...+. ....++.++.+|+.++.            +
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4567899999999999999999999999999999998654332222111 12346888999998751            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||.......    .+++...+++|+.|+.++++++.+    .+. +||++||...+               
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~---------------  166 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE---------------  166 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT---------------
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC---------------
Confidence            479999999997554332    235778999999999999887654    343 89999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       167 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (271)
T 4ibo_A          167 -LARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM  212 (271)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence             23344578999999999999999887   48999999999998874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.85  E-value=4.5e-21  Score=171.11  Aligned_cols=166  Identities=12%  Similarity=0.067  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceEEEeccccchh-----cc-----
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFELIRHDVVEPI-----LL-----  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~-----~~-----  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+......   ...++.++.+|+.++.     +.     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999987543221111110   1226788999997751     21     


Q ss_pred             -CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 -EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 -~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                       ++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+.              
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  149 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR--------------  149 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC--------------
Confidence             49999999996543222    23577899999999988877664    4454 899999987762              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                        +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++..
T Consensus       150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (260)
T 2z1n_A          150 --PWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV  195 (260)
T ss_dssp             --CCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence              23345689999999999999998775   89999999999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.85  E-value=6.7e-21  Score=170.42  Aligned_cols=165  Identities=13%  Similarity=0.121  Sum_probs=128.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999999754332221111 12357889999998761            34


Q ss_pred             CCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+||||||..... .    ..+++...+++|+.++.++++++..    .+.++|++||...+                
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------  151 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVR----------------  151 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGG----------------
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhc----------------
Confidence            799999999864221 1    2235778999999999999988643    34699999998765                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       152 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  197 (264)
T 3ucx_A          152 HSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT  197 (264)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred             cCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence            23344568999999999999999987   58999999999998864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.85  E-value=6.6e-21  Score=169.95  Aligned_cols=163  Identities=13%  Similarity=0.036  Sum_probs=125.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-ecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-DNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++|++|||||+|+||++++++|+++|++|+++ +|+.....+..... ....++.++.+|+.++            .+..
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999987 55433221111111 1234788999999876            2347


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+    .+. +||++||...+                .
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~----------------~  146 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI----------------R  146 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT----------------S
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC----------------C
Confidence            8999999996544332    234677899999999999998743    343 89999998765                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       147 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  191 (258)
T 3oid_A          147 YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA  191 (258)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence            33455789999999999999999874   8999999999998874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.85  E-value=2.2e-20  Score=169.81  Aligned_cols=166  Identities=16%  Similarity=0.121  Sum_probs=129.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC-ccccccc--cCCCceEEEeccccchh-----------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR-KDNLVHH--FRNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~~~D~~~~~-----------  177 (335)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.... .+.+...  ....++.++.+|+.++.           
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999998863311 1111111  12356888999998751           


Q ss_pred             -ccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 -LLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                       +.++|+||||||......     ..+++...+++|+.|+.++++++...   +.+||++||...+.             
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-------------  191 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-------------  191 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS-------------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc-------------
Confidence             357999999999644221     23357889999999999999998765   24899999988763             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         +......|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       192 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          192 ---PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence               33445789999999999999999875   8999999999998863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.85  E-value=1.8e-20  Score=165.16  Aligned_cols=157  Identities=14%  Similarity=0.094  Sum_probs=122.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----------hccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----------ILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~~vD~V  184 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+...    ..+.+   .+..+.+|+.++           .+.++|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----AAQSL---GAVPLPTDLEKDDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHH---TCEEEECCTTTSCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHhh---CcEEEecCCchHHHHHHHHHHHHHcCCCCEE
Confidence            5799999999999999999999999999999997543    11112   266778888653           13479999


Q ss_pred             EEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          185 YHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       185 ih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      |||||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+...              ...+
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------~~~~  140 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG--------------GPVP  140 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------TTSC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC--------------CCCC
Confidence            99999654322    223577899999999999998874    3454 99999998776321              0133


Q ss_pred             CChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ...|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       141 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  181 (239)
T 2ekp_A          141 IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF  181 (239)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence            4689999999999999998875   8999999999998874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=168.63  Aligned_cols=169  Identities=14%  Similarity=0.053  Sum_probs=126.8

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCCCcccccccc-CCCceEEEeccccchh-----c---
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRG---DEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI-----L---  178 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-----~---  178 (335)
                      ....++|+|+||||+|+||++++++|+++|   ++|++++|+...... +.+.. ...++.++.+|+.+..     +   
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            445678899999999999999999999999   999999997654321 11110 1346889999997751     1   


Q ss_pred             ----c--CCCEEEEccCCCC-CCC----ccCChhhHHhhHHHHHHHHHHHHHHc----------------CCeEEEEecc
Q 019794          179 ----L--EVDQIYHLACPAS-PVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----------------GAKFLLTSTS  231 (335)
Q Consensus       179 ----~--~vD~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----------------~~r~v~iSS~  231 (335)
                          .  ++|+||||||... ...    ..+++...+++|+.++.++++++.+.                +.+||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                2  7999999999754 221    22356778999999999999987543                3589999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       232 ~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ..+...             .+..+...|+.+|++.+.+++.++.+   .++++++++||.|..+.
T Consensus       175 ~~~~~~-------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  226 (267)
T 1sny_A          175 LGSIQG-------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  226 (267)
T ss_dssp             GGCSTT-------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             cccccC-------------CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC
Confidence            776321             11124467999999999999999877   58999999999997764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.85  E-value=9.2e-21  Score=167.38  Aligned_cols=161  Identities=14%  Similarity=0.104  Sum_probs=114.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++ |+.... +.....+  ...++.++.+|+.++.            +
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSL-DATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHH-HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999994 443221 1111111  1346888999998752            2


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEeccc-ccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSE-VYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~-v~~~~~~~~~~E~~~~  248 (335)
                      .++|+||||||......    ..+++...+++|+.++.++++++.+    .+. +||++||.. .|+             
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------  148 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG-------------  148 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-------------
Confidence            37999999999754322    2346788999999999999887754    344 899999964 332             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                          ......|+.+|.+.|.+++.++.+.   ++++++++||.+.++
T Consensus       149 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (247)
T 2hq1_A          149 ----NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD  191 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             ----CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEecc
Confidence                1234679999999999999998774   899999999999775

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.85  E-value=5.3e-21  Score=171.39  Aligned_cols=164  Identities=9%  Similarity=0.001  Sum_probs=122.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+.... . ..++.++.+|+.++.            +.
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD-L-GKDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-H-CSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-h-CCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999999999865433222211 1 346888999998762            24


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+                
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~----------------  164 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGV----------------  164 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHc----------------
Confidence            79999999997544322    23578899999999888777653    3444 89999997655                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++.+.   |+++++++||.|.++.
T Consensus       165 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          165 VGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence            223344689999999999999998874   8999999999998863

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.85  E-value=4.9e-21  Score=171.68  Aligned_cols=166  Identities=16%  Similarity=0.111  Sum_probs=126.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (335)
                      +..++|+|+||||+|+||++++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            44678899999999999999999999999999999983221111111111  1346788999998751            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEeccccc-CCCCCCCCCCCcCCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVY-GDPLEHPQKETYWGN  249 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~-~~~~~~~~~E~~~~~  249 (335)
                      +.++|+||||||.......    .+++...+++|+.++.++++++.+.   +.+||++||...+ ..             
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  163 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-------------  163 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-------------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-------------
Confidence            2379999999996543221    2345788999999999999998765   4589999998776 21             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         ......|+.+|++.|.+++.++.+.   ++++++++||.++++.
T Consensus       164 ---~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          164 ---IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             ---CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence               1234679999999999999998775   8999999999998863

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=9.6e-21  Score=166.48  Aligned_cols=153  Identities=20%  Similarity=0.165  Sum_probs=122.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------c--cC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------L--LE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~--~~  180 (335)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.....         ....++.+|+.++.            +  .+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999999754322         12456778887641            2  47


Q ss_pred             CCEEEEccCCCCCCCc-----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|+||||||.......     .+++...+++|+.++.++++++.+.   +.++|++||...+                .+
T Consensus        73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~----------------~~  136 (236)
T 1ooe_A           73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM----------------GP  136 (236)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------SC
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc----------------cC
Confidence            9999999996543222     2356789999999999999998764   2489999998776                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+.     |+++++++||.+.++
T Consensus       137 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~  181 (236)
T 1ooe_A          137 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP  181 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence            3445789999999999999998775     499999999999886

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.85  E-value=2.8e-21  Score=174.63  Aligned_cols=177  Identities=15%  Similarity=0.105  Sum_probs=131.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc-----------ccc--ccCCCceEEEeccccchh--
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-----------LVH--HFRNPRFELIRHDVVEPI--  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-----------~~~--~~~~~~~~~~~~D~~~~~--  177 (335)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.......           ...  .....++.++.+|+.++.  
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            46789999999999999999999999999999999874322110           000  012357889999998751  


Q ss_pred             ----------ccCCCEEEEccCCCCCC--CccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCC
Q 019794          178 ----------LLEVDQIYHLACPASPV--HYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       178 ----------~~~vD~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~  242 (335)
                                +.++|+||||||.....  ...+++...+++|+.|+.++++++...   +.++|++||...+......+.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence                      24799999999975443  223467889999999999999998764   248999999776543222222


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                      .+.     .+......|+.+|.+.+.+++.++.+.   |+++++++||.|.++..
T Consensus       167 ~~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          167 AGG-----PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             ccc-----cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            222     222334679999999999999999885   89999999999998753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.85  E-value=6.8e-21  Score=167.01  Aligned_cols=160  Identities=16%  Similarity=0.027  Sum_probs=117.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      ++|+|+||||+|+||++++++|+++|++|++++|+...... +....  .++.++.+|+.+..            +.++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA-LAAEL--EGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999986432221 11111  26788889987751            24799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +||||||.......    .+++...+++|+.++.++++.+    ++.+. +||++||...+.                +.
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  144 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----------------PF  144 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----------------CC
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC----------------CC
Confidence            99999996543322    2356789999999998776654    44454 899999987652                23


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .+...|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  187 (234)
T 2ehd_A          145 KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF  187 (234)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            34568999999999999988876   48999999999997753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=165.91  Aligned_cols=151  Identities=21%  Similarity=0.176  Sum_probs=121.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc------cCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL------LEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~------~~vD~V  184 (335)
                      +|+|+||||+|+||++++++|+++|++|++++|+..  .         ..+.++.+|+.++     .+      .++|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            579999999999999999999999999999998754  1         1346788888765     22      279999


Q ss_pred             EEccCCCCCCCccC--------ChhhHHhhHHHHHHHHHHHHHHc----C-------CeEEEEecccccCCCCCCCCCCC
Q 019794          185 YHLACPASPVHYKY--------NPVKTIKTNVMGTLNMLGLAKRV----G-------AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       185 ih~A~~~~~~~~~~--------~~~~~~~~Nv~gt~~ll~~a~~~----~-------~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      |||||........+        ++...+++|+.++.++++++.+.    +       .+||++||...+.          
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------  140 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE----------  140 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----------
Confidence            99999654432221        56788999999999999988653    1       1899999987763          


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            +..+...|+.+|.+.+.+++.++.+.   |++++++|||.++++.
T Consensus       141 ------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  185 (242)
T 1uay_A          141 ------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL  185 (242)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred             ------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence                  22344689999999999999988774   8999999999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=8.6e-21  Score=172.71  Aligned_cols=165  Identities=14%  Similarity=0.047  Sum_probs=126.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCC---ceEEEeccccchh-----------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNP---RFELIRHDVVEPI-----------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~---~~~~~~~D~~~~~-----------  177 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+...... ...   ++.++.+|+.++.           
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999997543222111110 112   6788999998751           


Q ss_pred             -ccCCCEEEEccCCCCCCC--c----cCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 -LLEVDQIYHLACPASPVH--Y----KYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~~~--~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                       +.++|+||||||......  .    .+++...+++|+.|+.++++++.+.    +.+||++||...+.           
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~-----------  171 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-----------  171 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-----------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhcc-----------
Confidence             247999999999654322  1    2356789999999999999987543    35899999987653           


Q ss_pred             CCCCCCC-CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPI-GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~-~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                           +. .....|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       172 -----~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          172 -----QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             -----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence                 11 33468999999999999999876   48999999999998863

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.85  E-value=7.9e-21  Score=169.13  Aligned_cols=161  Identities=20%  Similarity=0.085  Sum_probs=123.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------ccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~vD  182 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +.++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998754322111111 01246788999998751            24799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +||||||.......    .+++...+++|+.|+.++++++.+    .+  .++|++||...+.                +
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  145 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------------G  145 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------C
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----------------C
Confidence            99999996543322    235678999999999998887654    34  4899999976542                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+   .|+++++++||.|.++
T Consensus       146 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  188 (256)
T 1geg_A          146 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  188 (256)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence            233468999999999999999876   4899999999999876

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.85  E-value=6.2e-21  Score=171.64  Aligned_cols=163  Identities=12%  Similarity=-0.006  Sum_probs=126.4

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (335)
                      +++|+|+||||+  |+||++++++|+++|++|++++|+.. ..+.+.... ....+.++.+|+.++.            +
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999  99999999999999999999999764 211111110 0123678889997751            3


Q ss_pred             cCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .++|+||||||....    ..    ..+++...+++|+.|+.++++++.+.   +.+||++||...+.            
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  150 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------  150 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC------------
Confidence            479999999997543    11    22356789999999999999999775   45899999976542            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          +......|+.+|.+.+.+++.++.+.   |+++++++||.|.++.
T Consensus       151 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  195 (275)
T 2pd4_A          151 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA  195 (275)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence                22344679999999999999998875   8999999999999874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=9.4e-21  Score=170.11  Aligned_cols=160  Identities=21%  Similarity=0.213  Sum_probs=123.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+...... +....  ..+.++.+|+.++.            +.++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA-LEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh--cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999986543221 11111  24788899997751            2479


Q ss_pred             CEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||..... .    ..+++...+++|+.|+.++++++.+    .+.++|++||...+.                +
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~  147 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------------G  147 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----------------C
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC----------------C
Confidence            9999999965321 1    1234678999999999999998853    346999999975431                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+   .|+++++++||.|+++
T Consensus       148 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~  190 (270)
T 1yde_A          148 QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP  190 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence            123467999999999999999876   4899999999999986

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=1.4e-20  Score=171.53  Aligned_cols=163  Identities=14%  Similarity=0.096  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc------cCCCceEEEeccccchh---------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH------FRNPRFELIRHDVVEPI---------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~---------  177 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.........+.      ....++.++.+|+.++.         
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999998754322111110      02356889999997751         


Q ss_pred             ---ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCC
Q 019794          178 ---LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 ---~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                         +.++|+||||||.......    .+++...+++|+.|+.++++++.+.     +.++|++||...+           
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------  163 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-----------  163 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-----------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc-----------
Confidence               2369999999996433222    2346778999999999999987652     3489999997632           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                            +......|+.+|...+.+.+.++.+.   |++++++|||.|+|+
T Consensus       164 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  207 (303)
T 1yxm_A          164 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ  207 (303)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred             ------CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccc
Confidence                  22334679999999999999998874   899999999999998

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.85  E-value=6.1e-21  Score=175.41  Aligned_cols=165  Identities=18%  Similarity=0.094  Sum_probs=124.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc---ccCCCceEEEeccccchh------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HFRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~------------  177 (335)
                      .+++|+||||||+|+||++++++|+++|++|++++|+..........   ......+.++.+|+.++.            
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999975533222111   111237889999998752            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----------CCeEEEEecccccCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----------GAKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----------~~r~v~iSS~~v~~~~~~~~~  242 (335)
                      +..+|+||||||.......    .+++...+++|+.|+.++++++...           +.+||++||...+.       
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~-------  157 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL-------  157 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc-------
Confidence            2478999999997544332    2356789999999999999987542           34799999987763       


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                               +......|+.||.+.+.+.+.++.+   .|+++++++||.|.++.
T Consensus       158 ---------~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          158 ---------AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             ---------CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             ---------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence                     2334468999999888888877765   38999999999998864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=5.1e-21  Score=172.76  Aligned_cols=165  Identities=16%  Similarity=0.096  Sum_probs=120.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            +
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999864322222111111  2357889999998752            2


Q ss_pred             cCCCEEEEccCCCC--CCC----ccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCC
Q 019794          179 LEVDQIYHLACPAS--PVH----YKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       179 ~~vD~Vih~A~~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                      .++|+||||||...  ...    ..+++...+++|+.|+.++++++.+.        +.+||++||...+          
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------  175 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV----------  175 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc----------
Confidence            47999999999732  111    23457789999999999999887543        2389999997665          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                            .+......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       176 ------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  221 (280)
T 4da9_A          176 ------MTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM  221 (280)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             ------cCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence                  23334468999999999999999987   48999999999998874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.85  E-value=9.6e-21  Score=169.98  Aligned_cols=167  Identities=17%  Similarity=0.107  Sum_probs=129.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~  177 (335)
                      ..+++|+++||||+|+||++++++|+++|++|+++++......+.....+  ...++.++.+|+.++            .
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999998875433222222111  235688899999875            2


Q ss_pred             ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +..+|+||||||......    ..+++...+++|+.|+.++++++.+.   +.++|++||.....               
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  158 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---------------  158 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---------------
Confidence            347999999999765433    23357889999999999999998765   34899999975211               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.++   |++++.++||.|.++.
T Consensus       159 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  204 (270)
T 3is3_A          159 FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM  204 (270)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            233445789999999999999999874   8999999999998874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.85  E-value=8.3e-21  Score=168.07  Aligned_cols=164  Identities=15%  Similarity=0.104  Sum_probs=124.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+|+||||+|+||++++++|+++|++|++++|+................+.++.+|+.++.            +..+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999999999999875432221111111256889999997752            2369


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      |+||||||.......    .+++...+++|+.++.++++++.    +.+  .+||++||...+.                
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------  147 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc----------------
Confidence            999999996543322    23467899999999988777654    334  4899999987763                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+     .+++++++|||.++++.
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~  194 (251)
T 1zk4_A          148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence            2234468999999999999988764     47999999999999874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.85  E-value=3e-20  Score=165.29  Aligned_cols=155  Identities=15%  Similarity=0.137  Sum_probs=120.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.....          .+.++.+|+.++            .+..
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIEETHGP   87 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            456789999999999999999999999999999998643221          267788898775            1346


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.|+.++++++.+    .+. +||++||...+.                
T Consensus        88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------  151 (253)
T 2nm0_A           88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL----------------  151 (253)
T ss_dssp             CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----------------
Confidence            899999999754322    3456889999999999999987654    344 899999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.|.++.
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  196 (253)
T 2nm0_A          152 GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDM  196 (253)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence            11223579999999999999998874   7999999999997764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.85  E-value=5.8e-20  Score=166.14  Aligned_cols=167  Identities=19%  Similarity=0.119  Sum_probs=129.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC------------ccccc---cc--cCCCceEEEecccc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR------------KDNLV---HH--FRNPRFELIRHDVV  174 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~------------~~~~~---~~--~~~~~~~~~~~D~~  174 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+....            .+.+.   ..  ....++.++.+|+.
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            346789999999999999999999999999999999873211            11111   11  12357888999998


Q ss_pred             ch------------hccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecc
Q 019794          175 EP------------ILLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTS  231 (335)
Q Consensus       175 ~~------------~~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~  231 (335)
                      ++            .+..+|+||||||......     ..+++...+++|+.|+.++++++...    +  .+||++||.
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            75            2347999999999755433     23357789999999999999987542    2  489999998


Q ss_pred             cccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCC
Q 019794          232 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       232 ~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~  294 (335)
                      ..+                .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+..
T Consensus       167 ~~~----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (286)
T 3uve_A          167 GGL----------------KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML  216 (286)
T ss_dssp             GGT----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred             hhc----------------cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence            765                23344578999999999999999987   489999999999998753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.85  E-value=1.8e-20  Score=166.53  Aligned_cols=165  Identities=10%  Similarity=0.021  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh-----c------cC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI-----L------LE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~------~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.     +      .+
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            456789999999999999999999999999999999765433222111 11357889999998751     1      47


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.    +.+ .++|++||...+                .
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------~  147 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL----------------R  147 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT----------------C
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHc----------------C
Confidence            8999999997654332    23567899999999999988763    344 389999997665                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcE-EEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEV-RIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~-~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.+.   |+++ +++.||.|..+.
T Consensus       148 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~  193 (252)
T 3h7a_A          148 GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAW  193 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChh
Confidence            33445789999999999999998874   8999 899999997764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.85  E-value=1.8e-20  Score=166.93  Aligned_cols=161  Identities=19%  Similarity=0.106  Sum_probs=124.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC--Cccccccc-cCCCceEEEeccccchh------------ccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG--RKDNLVHH-FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +|+++||||+|+||++++++|+++|++|++++|+...  ..+..... ....++.++.+|+.++.            +.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999987543  21111111 01346788999998751            247


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+.    +  .+||++||...+.               
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ---------------  146 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc---------------
Confidence            9999999997544322    2356789999999999999987652    3  5899999987652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++.+.   |+++++++||.+.++
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  190 (258)
T 3a28_C          147 -GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG  190 (258)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence             23344689999999999999998764   899999999999765

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.84  E-value=1.3e-20  Score=167.09  Aligned_cols=165  Identities=12%  Similarity=0.001  Sum_probs=129.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+...+...+. ....++..+.+|+.++            .+.
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999755433222211 1235788899999876            346


Q ss_pred             CCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|++|||||..... .    ..++|++.+++|+.|+..+++++.+    .+. ++|++||...+               
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~---------------  148 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI---------------  148 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT---------------
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc---------------
Confidence            799999999965432 2    2336889999999999999887643    343 99999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+...+.+.++.+.   ||+++.|.||.|-.+.
T Consensus       149 -~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  194 (254)
T 4fn4_A          149 -RGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI  194 (254)
T ss_dssp             -CSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence             233344689999999999999999874   8999999999997763

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.84  E-value=5.4e-21  Score=168.17  Aligned_cols=161  Identities=14%  Similarity=0.059  Sum_probs=123.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      .+|+++||||+|+||++++++|+++|++|++++|+.....+... ... ..+.++.+|+.++            .+..+|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL-LLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            36799999999999999999999999999999997543322211 111 2588899999875            124699


Q ss_pred             EEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          183 QIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       183 ~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +||||||......    ..+++...+++|+.|+.++++++...    +.++|++||...+                .+..
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~----------------~~~~  143 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ----------------VGKA  143 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECC----------------SSCS
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhc----------------CCCC
Confidence            9999999754332    23457789999999999999987542    2389999997654                2233


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+++.++.+.   |+++++++||.|..+.
T Consensus       144 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  185 (235)
T 3l6e_A          144 NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF  185 (235)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence            44689999999999999999874   7999999999997764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.84  E-value=6.1e-21  Score=172.26  Aligned_cols=166  Identities=14%  Similarity=0.034  Sum_probs=128.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      +++|++|||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++            .+.+
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999998754332221111 1235688899999875            1347


Q ss_pred             CCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||..... .    ..+++...+++|+.|+.++++++..    .+. ++|++||...+.               
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  150 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT---------------  150 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT---------------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc---------------
Confidence            99999999965331 1    2235778999999999999998754    233 899999977652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                      .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++..
T Consensus       151 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  197 (280)
T 3tox_A          151 AGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPAN  197 (280)
T ss_dssp             BCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTS
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchh
Confidence            122345689999999999999999875   89999999999998753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.84  E-value=1.3e-20  Score=170.48  Aligned_cols=164  Identities=10%  Similarity=-0.040  Sum_probs=125.9

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (335)
                      +++|+|+||||+  |+||++++++|+++|++|++++|+.. ..+.+.... ....+.++.+|+.++.            +
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999999753 111111110 0123678889997751            2


Q ss_pred             cCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      .++|+||||||....    ..    ..+++...+++|+.|+.++++++.+.    +.+||++||...+.           
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------  166 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK-----------  166 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS-----------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc-----------
Confidence            479999999997542    11    22356789999999999999998664    24899999976652           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                           +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++..
T Consensus       167 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (285)
T 2p91_A          167 -----VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA  212 (285)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence                 22344689999999999999998774   89999999999999853

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.84  E-value=2.9e-20  Score=165.38  Aligned_cols=166  Identities=16%  Similarity=0.163  Sum_probs=130.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+.............++..+.+|+.++            .+.
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999997654221111111235678899999876            346


Q ss_pred             CCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          180 EVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      .+|++|||||.......   .++|...+++|+.++..+++++.    +.+.++|++||...+                .+
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~----------------~~  146 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAV----------------TG  146 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHH----------------HC
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhc----------------cC
Confidence            79999999997543332   33578899999999999988764    335699999997665                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|.+.+.+.+.++.+.   ||+++.|.||.|..+.
T Consensus       147 ~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  190 (258)
T 4gkb_A          147 QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL  190 (258)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence            3344689999999999999999874   8999999999997764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.84  E-value=2.7e-20  Score=164.70  Aligned_cols=159  Identities=15%  Similarity=0.123  Sum_probs=123.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+. ....   .+.++.+|+.++.            +..+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-AEAV---GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999864322211 1111   2678889987751            2469


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||.......    .+++...+++|+.|+.++++++.+.    +. ++|++||...++                 
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------------  141 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----------------  141 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC-----------------
Confidence            999999997543322    2356788999999999999987653    43 899999976432                 


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|...+.+++.++.+.   |+++++++||.+.++.
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  185 (245)
T 1uls_A          142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM  185 (245)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence            1234679999999999999988764   8999999999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.84  E-value=8.9e-21  Score=171.75  Aligned_cols=167  Identities=19%  Similarity=0.109  Sum_probs=126.2

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CCCccccccc--cCCCceEEEeccccc----h-------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHH--FRNPRFELIRHDVVE----P-------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~~~D~~~----~-------  176 (335)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+. ....+.....  ....++.++.+|+.+    +       
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3446788999999999999999999999999999999975 3221111111  113468889999988    4       


Q ss_pred             -----hccCCCEEEEccCCCCCCCc--------------cCChhhHHhhHHHHHHHHHHHHHHc-----------CCeEE
Q 019794          177 -----ILLEVDQIYHLACPASPVHY--------------KYNPVKTIKTNVMGTLNMLGLAKRV-----------GAKFL  226 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~~~~~~--------------~~~~~~~~~~Nv~gt~~ll~~a~~~-----------~~r~v  226 (335)
                           .+.++|+||||||.......              .+++...+++|+.++.++++++...           +.+||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence                 12479999999997543222              1245678999999999999987542           23899


Q ss_pred             EEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       227 ~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ++||...+.                +......|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       178 ~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          178 NLCDAMVDQ----------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             EECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             EEecccccC----------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            999987652                33445789999999999999998774   8999999999999885

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.84  E-value=7.1e-21  Score=170.27  Aligned_cols=164  Identities=15%  Similarity=0.019  Sum_probs=125.8

Q ss_pred             CCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (335)
                      +++|+|+||||+  |+||++++++|+++|++|++++|+. ...+.+.... ......++.+|+.++.            +
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457899999999  9999999999999999999999976 2211111110 0122367889987751            2


Q ss_pred             cCCCEEEEccCCCCC----C-----CccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASP----V-----HYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~----~-----~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      .++|+||||||....    .     ...+++...+++|+.|+.++++++.+.   +.+||++||...+.           
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  154 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------  154 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-----------
Confidence            369999999997542    1     223357789999999999999999764   34899999976652           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                           +......|+.+|.+.+.+++.++.+.   |+++++++||.|+++..
T Consensus       155 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (265)
T 1qsg_A          155 -----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  200 (265)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence                 22344689999999999999998875   89999999999999853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.84  E-value=2.3e-20  Score=167.99  Aligned_cols=165  Identities=16%  Similarity=0.087  Sum_probs=129.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh-----------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI-----------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----------~~  179 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+..+.+|+.+..           ..
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999999999765443322211 12356888999997751           14


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|+||||||.......    .+++...+++|+.|+.++++++.    +.+ .+||++||...+.               
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~---------------  173 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR---------------  173 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC---------------
Confidence            79999999997544332    23567889999999999999873    334 3899999987652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.|..+
T Consensus       174 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  217 (275)
T 4imr_A          174 -PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD  217 (275)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence             33344679999999999999999875   899999999999775

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.84  E-value=5.2e-21  Score=171.79  Aligned_cols=165  Identities=13%  Similarity=0.010  Sum_probs=127.5

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~  178 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+..+.+|+.++            .+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999999654322211111 0124677888999775            23


Q ss_pred             cCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||......    ..+++...+++|+.|+.++++++.+    .+ .+||++||...+.              
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  169 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA--------------  169 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--------------
Confidence            47999999999755433    2335778999999999999998753    33 4899999976652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                        +......|+.+|++.+.+++.++.+   .|+++++++||.|.++
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  213 (270)
T 3ftp_A          170 --GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTD  213 (270)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence              3334578999999999999999887   4899999999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.84  E-value=1.1e-20  Score=168.83  Aligned_cols=165  Identities=15%  Similarity=0.013  Sum_probs=124.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------cc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ..++|+||||||+|+||++++++|+++|++|++++|+........... .....+.++.+|+.+..            +.
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            367889999999999999999999999999999999754332211111 12356888999997752            24


Q ss_pred             CCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|+||||||..... .    ..+++...+++|+.|+.++++++..    .+ .+||++||...+               
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------------  170 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK---------------  170 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS---------------
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc---------------
Confidence            699999999973221 1    2235678999999999999998644    33 489999998765               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       171 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~  216 (262)
T 3rkr_A          171 -NPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF  216 (262)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             -CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence             33445578999999999999999877   48999999999997753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.84  E-value=7.2e-21  Score=171.07  Aligned_cols=163  Identities=17%  Similarity=0.153  Sum_probs=123.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.....+.... + ..++.++.+|+.++            .+.+
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE-I-GDDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-H-TSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-h-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999875433222221 1 25678899999875            1347


Q ss_pred             CCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----cC---CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          181 VDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----VG---AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       181 vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~---~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +|+||||||..... .    ..+++...+++|+.|+.++++++.+    .+   .+||++||...+              
T Consensus       103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~--------------  168 (272)
T 4dyv_A          103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT--------------  168 (272)
T ss_dssp             CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT--------------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc--------------
Confidence            99999999975432 1    2235678999999999999887643    22   489999997765              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       169 --~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (272)
T 4dyv_A          169 --SPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM  214 (272)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence              23344578999999999999999887   48999999999998764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.84  E-value=3.7e-20  Score=164.22  Aligned_cols=160  Identities=16%  Similarity=0.125  Sum_probs=121.3

Q ss_pred             CCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCE
Q 019794          110 VGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQ  183 (335)
Q Consensus       110 ~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~  183 (335)
                      .....++|+|+||||+|+||++++++|+++|++|++++|+...    ... .  ..+.++ +|+.+.      .+.++|+
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~-~--~~~~~~-~D~~~~~~~~~~~~~~iD~   84 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKR-S--GHRYVV-CDLRKDLDLLFEKVKEVDI   84 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHH-T--CSEEEE-CCTTTCHHHHHHHSCCCSE
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHh-h--CCeEEE-eeHHHHHHHHHHHhcCCCE
Confidence            3456788999999999999999999999999999999986421    111 1  245566 787321      2337999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      ||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+.                +..
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  148 (249)
T 1o5i_A           85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----------------PIE  148 (249)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------CCT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC----------------CCC
Confidence            9999996543322    2356788999999988776654    44554 999999988763                233


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+++.++.+   .|+++++++||.++++.
T Consensus       149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  190 (249)
T 1o5i_A          149 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  190 (249)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence            4578999999999999999876   48999999999999875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.84  E-value=1.5e-20  Score=170.94  Aligned_cols=166  Identities=13%  Similarity=-0.022  Sum_probs=129.0

Q ss_pred             CCCCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch-----------
Q 019794          111 GIGRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP-----------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~-----------  176 (335)
                      ...+++|+++||||+|  +||++++++|+++|++|++++|+..... .+... .....+.++.+|+.++           
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK-RVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            4456789999999998  9999999999999999999999753211 11111 0113457889999876           


Q ss_pred             -hccCCCEEEEccCCCCC----C----CccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCC
Q 019794          177 -ILLEVDQIYHLACPASP----V----HYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       177 -~~~~vD~Vih~A~~~~~----~----~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                       .+.++|+||||||....    .    ...+++...+++|+.++.++++++...   +.+||++||...+          
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~----------  173 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE----------  173 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT----------
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc----------
Confidence             12579999999997542    1    123357889999999999999998764   2389999998765          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       174 ------~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  219 (296)
T 3k31_A          174 ------KVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA  219 (296)
T ss_dssp             ------SCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred             ------cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence                  233445789999999999999999875   8999999999999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.84  E-value=4.1e-20  Score=163.09  Aligned_cols=159  Identities=17%  Similarity=0.186  Sum_probs=126.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~  183 (335)
                      .|+|+||||+++||++++++|+++|++|++++|+.+...+...   ...++..+.+|+.++            .+.++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999997543322221   235678899999876            3467999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      +|||||.......    .++|+..+++|+.|+..+.+++.+    .+.++|++||...+                .+...
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~----------------~~~~~  142 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAF----------------QSEPD  142 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGT----------------SCCTT
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccc----------------cCCCC
Confidence            9999997654443    236888999999999999887643    35699999997665                23334


Q ss_pred             CChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                      ...|+.+|.+...+.+.++.+.  +++++.|.||.|-.+.
T Consensus       143 ~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~  182 (247)
T 3ged_A          143 SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTE  182 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence            4689999999999999999875  7999999999997653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.84  E-value=2e-20  Score=170.40  Aligned_cols=167  Identities=19%  Similarity=0.070  Sum_probs=129.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC--------ccccc---cc--cCCCceEEEeccccch--
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR--------KDNLV---HH--FRNPRFELIRHDVVEP--  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~--  176 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+....        .+.+.   ..  ....++.++.+|+.++  
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            346789999999999999999999999999999999874311        11110   11  1235788999999875  


Q ss_pred             ----------hccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc----C--CeEEEEecccccC
Q 019794          177 ----------ILLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV----G--AKFLLTSTSEVYG  235 (335)
Q Consensus       177 ----------~~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~--~r~v~iSS~~v~~  235 (335)
                                .+..+|+||||||......     ..+++...+++|+.|+.++++++...    +  .+||++||...+ 
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~-  182 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL-  182 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT-
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc-
Confidence                      2347999999999754432     23357889999999999999987543    2  389999998765 


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       236 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                                     .+......|+.+|++.+.+++.++.+.   |+++++|+||.|.++..
T Consensus       183 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  229 (299)
T 3t7c_A          183 ---------------RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML  229 (299)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             ---------------cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence                           233445789999999999999999875   89999999999998753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.84  E-value=3e-20  Score=164.98  Aligned_cols=155  Identities=19%  Similarity=0.158  Sum_probs=119.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      ...+++|+|+||||+|+||++++++|+++|++|++++|+......           ..+.+|+.+.            .+
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----------HSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----------EEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----------cceEEEeCCHHHHHHHHHHHHHHc
Confidence            445678899999999999999999999999999999997653321           2344555443            23


Q ss_pred             cCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|+||||||......     ..+++...+++|+.|+.++++++.+.   +.+||++||...+                
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~----------------  149 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL----------------  149 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc----------------
Confidence            46899999999654322     23356789999999999999998764   2389999998766                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|.+.+.+++.++.+     .++++++++||.|.++
T Consensus       150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~  196 (251)
T 3orf_A          150 NRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP  196 (251)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence            23445578999999999999999987     4799999999999875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.84  E-value=2.3e-21  Score=180.72  Aligned_cols=181  Identities=15%  Similarity=0.132  Sum_probs=129.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecc-ccch-----hccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD-VVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-~~~~-----~~~~vD~Vih~A~  189 (335)
                      +|+|+|||||||||++++++|+++|++|++++|+......  ........++++.+| +.++     ++.++|+|||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            5789999999999999999999999999999997553210  111112467889999 8664     4678999999986


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEeccc--ccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSE--VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~--v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      ...           .+.|..+ .+++++|++.+ + +||++||..  .|+.                 .+...|+.+|..
T Consensus        83 ~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------------~~~~~y~~sK~~  133 (352)
T 1xgk_A           83 SQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------------WPAVPMWAPKFT  133 (352)
T ss_dssp             STT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------------CCCCTTTHHHHH
T ss_pred             CCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------------CCCccHHHHHHH
Confidence            421           1357776 99999999998 7 899999975  3321                 122569999999


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCe--EEecCCCceeeceec-ccccC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPM--TVYGDGKQTRSFQYV-SDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~--~~~g~g~~~~~~v~v-~Dva~  335 (335)
                      +|++++.    .+++++++||+ +||++...   .+...+.......+.+  .++++++..++++|+ +|+|+
T Consensus       134 ~E~~~~~----~gi~~~ivrpg-~~g~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~  198 (352)
T 1xgk_A          134 VENYVRQ----LGLPSTFVYAG-IYNNNFTS---LPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGP  198 (352)
T ss_dssp             HHHHHHT----SSSCEEEEEEC-EEGGGCBS---SSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHH
T ss_pred             HHHHHHH----cCCCEEEEecc-eecCCchh---cccccccccccCCCceEEeeccCCCCceeeEecHHHHHH
Confidence            9999865    48999999987 78886421   1111110011122333  346778888999999 89873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=9.9e-21  Score=168.04  Aligned_cols=164  Identities=13%  Similarity=0.050  Sum_probs=123.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc---cc-CCCceEEEeccccch------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH---HF-RNPRFELIRHDVVEP------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~~~D~~~~------------  176 (335)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.....+....   .. ....+.++.+|+.+.            
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999975433222111   11 125678899999875            


Q ss_pred             hccCCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          177 ILLEVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+..+|+||||||.......   .+++...+++|+.|+.++++++.    +.+. ++|++||...+.             
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------  150 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-------------  150 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-------------
Confidence            13479999999997544333   23467899999999999999873    3343 899999976541             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         +..+...|+.+|.+.+.+++.++.+.   |+++++++||.|..+
T Consensus       151 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  194 (250)
T 3nyw_A          151 ---GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD  194 (250)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence               22335789999999999999998874   899999999999764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.84  E-value=4.2e-20  Score=163.62  Aligned_cols=154  Identities=18%  Similarity=0.141  Sum_probs=118.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.....+          +..+.+|+.++            .+..
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG----------LFGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----------SEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------hcCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            4578899999999999999999999999999999997543221          11367788764            1246


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||......    ..+++...+++|+.|+.++++++.+    .+. ++|++||...+.                
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  145 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----------------  145 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc----------------
Confidence            899999999754322    2235778999999999999998754    444 899999976541                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+   .|+++++++||.+.++
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  189 (247)
T 1uzm_A          146 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD  189 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence            2233468999999999999999877   4899999999999765

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.84  E-value=1.6e-20  Score=170.15  Aligned_cols=163  Identities=12%  Similarity=0.113  Sum_probs=127.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccc---cccCCCceEEEeccccchh----------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPI----------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~----------  177 (335)
                      +++|+++||||+|+||++++++|+++|+   +|++++|+.+...+...   ......++.++.+|+.++.          
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999998   99999987543322111   1112457889999998752          


Q ss_pred             --ccCCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCC
Q 019794          178 --LLEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 --~~~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                        +.++|+||||||..... .    ..+++...+++|+.|+.++++++.    +.+ .+||++||...+           
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~-----------  179 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR-----------  179 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-----------
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc-----------
Confidence              34699999999965421 1    233578899999999999999873    334 499999998765           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                           .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+
T Consensus       180 -----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~  224 (287)
T 3rku_A          180 -----DAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE  224 (287)
T ss_dssp             -----SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred             -----CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence                 23344578999999999999999988   4899999999999886

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.84  E-value=1.7e-20  Score=168.65  Aligned_cols=161  Identities=13%  Similarity=0.029  Sum_probs=121.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~vD~V  184 (335)
                      |+++||||+|+||++++++|+++|++|++++|+.....+.........++.++.+|+.++            .+..+|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            799999999999999999999999999999997543222111111114688899999775            12458999


Q ss_pred             EEccCCCCC-CCc----cCChhhHHhhHHHHHHHHHHHHH----Hc-CC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          185 YHLACPASP-VHY----KYNPVKTIKTNVMGTLNMLGLAK----RV-GA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       185 ih~A~~~~~-~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~-~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |||||.... ...    .+++...+++|+.|+.++++++.    +. .. +||++||...+.                +.
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----------------~~  165 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----------------PY  165 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS----------------CC
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc----------------CC
Confidence            999997532 221    23577899999999998887764    33 35 999999987652                23


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       166 ~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~  208 (272)
T 2nwq_A          166 PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF  208 (272)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence            34468999999999999999876   38999999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.6e-20  Score=168.03  Aligned_cols=164  Identities=12%  Similarity=0.034  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....+..... .....+.++.+|+.++            .+..
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999998754332211111 1134678888999875            2347


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++..    .+ .+||++||...+                .
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~----------------~  145 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL----------------S  145 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHc----------------c
Confidence            9999999997544332    235778999999999999887643    34 489999998765                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh-CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.+. |+++++++||.|..+.
T Consensus       146 ~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~  188 (264)
T 3tfo_A          146 VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL  188 (264)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred             cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence            33445689999999999999999875 8999999999998763

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2e-20  Score=168.10  Aligned_cols=166  Identities=10%  Similarity=-0.013  Sum_probs=125.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccchh------------c
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ...++|+|+||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3467889999999999999999999999999999998754322111111 01346888999997752            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+.              
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--------------  172 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--------------  172 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--------------
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC--------------
Confidence            479999999997544332    23466889999999888887764    3444 899999987652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh------CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA------GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~------~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|++.+.+++.++.+.      |+++++++||.+.++.
T Consensus       173 --~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          173 --SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence              22234679999999999999998764      8999999999998764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.84  E-value=1.4e-20  Score=167.37  Aligned_cols=161  Identities=17%  Similarity=0.153  Sum_probs=125.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +|+++||||+|+||++++++|+++|  +.|++++|+.....+ +.... ..++.++.+|+.++.            +..+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK-LKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHH-HHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHH-HHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            5799999999999999999999985  688888886443222 11111 246888999998762            3479


Q ss_pred             CEEEEccCCCCC-CC----ccCChhhHHhhHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          182 DQIYHLACPASP-VH----YKYNPVKTIKTNVMGTLNMLGLA----KRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       182 D~Vih~A~~~~~-~~----~~~~~~~~~~~Nv~gt~~ll~~a----~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      |+||||||.... ..    ..+++...+++|+.|+.++++++    ++.+.++|++||...+                .+
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~----------------~~  143 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACN----------------MY  143 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCC----------------CS
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhc----------------cC
Confidence            999999997433 21    22357789999999999999988    4445799999997765                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh-CCcEEEEEeCceeCCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~ivRp~~v~Gp~~  294 (335)
                      ......|+.+|.+.+.+++.++.+. +++++.++||.|.++..
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~  186 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQ  186 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhH
Confidence            3455789999999999999999885 89999999999998753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.84  E-value=1.9e-20  Score=165.99  Aligned_cols=157  Identities=16%  Similarity=0.136  Sum_probs=122.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~vD~V  184 (335)
                      |+++||||+|+||++++++|+++|++|++++|+.....+ ....+. .++.++.+|+.++.            +.++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            589999999999999999999999999999986533221 111111 46788999997751            2469999


Q ss_pred             EEccCCCC-CCC----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPAS-PVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||||... ...    ..+++...+++|+.|+.++++++.    +.+ .+||++||...+.                +..
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~~  142 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PYA  142 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------CCT
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc----------------CCC
Confidence            99999652 111    223577899999999999998875    334 4999999987652                333


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      ....|+.+|.+.+.+++.++.+.   |+++++++||.|.|
T Consensus       143 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g  182 (248)
T 3asu_A          143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG  182 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence            45689999999999999998774   89999999999995

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.84  E-value=1.3e-20  Score=164.22  Aligned_cols=146  Identities=16%  Similarity=0.091  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vi  185 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+..                   +|+.++        .+.++|+||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            46789999999999999999999999999999988643                   444443        235799999


Q ss_pred             EccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          186 HLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       186 h~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ||||..... .    ..+++...+++|+.++.++++++.+.   +.++|++||...+.                +.....
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~~~  128 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK----------------VVANTY  128 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----------------CCTTCH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----------------CCCCch
Confidence            999965222 1    22356788999999999999998765   23899999987652                334457


Q ss_pred             hHHHHHHHHHHHHHHHHhhhC-CcEEEEEeCceeCCCC
Q 019794          258 CYDEGKRTAETLTMDYHRGAG-VEVRIARIFNTYGPRM  294 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~-i~~~ivRp~~v~Gp~~  294 (335)
                      .|+.+|.+.+.+++.++.+.+ ++++.++||.+.++..
T Consensus       129 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~  166 (223)
T 3uce_A          129 VKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAY  166 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhh
Confidence            899999999999999998875 9999999999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=1.1e-20  Score=168.55  Aligned_cols=166  Identities=14%  Similarity=0.058  Sum_probs=125.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      .+++|+++||||+|+||++++++|+++|++|+++++......+.....+  ...++.++.+|+.++.            +
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999998654332222211111  1346788999998751            2


Q ss_pred             cCCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|+||||||..... .    ..+++...+++|+.|+.++++++.+.   +.++|++||...+.               
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  149 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD---------------  149 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH---------------
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc---------------
Confidence            4799999999865222 2    12346789999999999999999765   23899999987651               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhhC--CcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~~--i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+.+  ++++++.||.|..+.
T Consensus       150 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~  194 (259)
T 3edm_A          150 GGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTF  194 (259)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcc
Confidence            1223346899999999999999998853  999999999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.84  E-value=1.5e-20  Score=166.33  Aligned_cols=163  Identities=15%  Similarity=0.054  Sum_probs=123.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec-CCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN-FFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      +++|+++||||+|+||++++++|+++|++|++++| +..... .....+  ...++.++.+|+.++.            +
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN-EVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999998 432211 111111  1346788899998751            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. +||++||...+.              
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  146 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT--------------  146 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC--------------
Confidence            479999999997543322    23567899999999888877654    3454 899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.
T Consensus       147 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  191 (246)
T 2uvd_A          147 --GNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM  191 (246)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence              1223467999999999999998876   38999999999998874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.84  E-value=3.1e-20  Score=163.02  Aligned_cols=163  Identities=15%  Similarity=0.029  Sum_probs=124.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------ccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +||+++||||+|+||++++++|+++|++|++++|+.+...+.....  ....++.++.+|+.++.            +.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999999754332221111  12357889999998752            237


Q ss_pred             CCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|+||||||......    ..+++...+++|+.|+.++++++.+    .+.++|++||...+                .+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~----------------~~  144 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA----------------RL  144 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS----------------SC
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhc----------------cc
Confidence            999999999765443    2335778999999999999998754    34578888776543                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhh-hCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~-~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|++.+.+++.+..+ .++++++++||.|..+.
T Consensus       145 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~  186 (235)
T 3l77_A          145 IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF  186 (235)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred             CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence            233467999999999999998655 38999999999997753

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.84  E-value=1.4e-20  Score=166.87  Aligned_cols=165  Identities=16%  Similarity=0.034  Sum_probs=130.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.. ...++..+.+|+.++            .+.
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            5789999999999999999999999999999999987554332222111 235678889999876            346


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR-----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~-----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|++|||||.......    .++|+..+++|+.|+..+++++.+     .+ .++|++||...+               
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~---------------  150 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ---------------  150 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT---------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc---------------
Confidence            79999999997655443    236888999999999999887632     23 489999997664               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+...+.+.++.+.   ||+++.|.||.|..+.
T Consensus       151 -~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  196 (255)
T 4g81_D          151 -AARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM  196 (255)
T ss_dssp             -SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence             233344679999999999999999874   8999999999997663

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.84  E-value=1.6e-20  Score=168.28  Aligned_cols=165  Identities=15%  Similarity=0.178  Sum_probs=128.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch--------hccC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP--------ILLE  180 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~--------~~~~  180 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+...   .......+..+.+|+.++        .+.+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            45678999999999999999999999999999999997543322211   112235677888998775        2357


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+    .+. ++|++||...+                .
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------------~  149 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI----------------M  149 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT----------------S
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc----------------c
Confidence            9999999997654432    235677899999998888777643    343 89999998776                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+.   |+++++++||.+.++
T Consensus       150 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          150 PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence            34455789999999999999999875   699999999999775

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.84  E-value=3.1e-20  Score=165.85  Aligned_cols=163  Identities=14%  Similarity=0.076  Sum_probs=124.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+............ ...++.++.+|+.++.            +.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            567899999999999999999999999999999987543221111110 1246788999997752            347


Q ss_pred             CCEEEEccCCC-CCCC----ccCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPA-SPVH----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|+||||||.. ....    ..+++...+++|+.++.++++++.+.    + .+||++||...+.               
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  149 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------------  149 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS---------------
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc---------------
Confidence            99999999965 2222    22356789999999999999987543    4 3899999977652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++.+   .|+++++++||.+..+
T Consensus       150 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          150 -GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence             2233468999999999999998876   3899999999998665

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.84  E-value=1e-21  Score=179.44  Aligned_cols=184  Identities=18%  Similarity=0.251  Sum_probs=129.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-cc--ccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-NL--VHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~--~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      +|+|+||||||+||++++++|+++|++|++++|+...... ..  ...+....++++.+|+.++     ++.++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            5789999999999999999999999999999997543211 11  0111235688899998774     56789999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKR  264 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~  264 (335)
                      ++....           ..|+.++.+++++|++.+ + +||+ |   +|+......  +      .+..+ ...| .+|.
T Consensus        84 a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~--~------~~~~p~~~~y-~sK~  139 (313)
T 1qyd_A           84 LAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM--E------HALQPGSITF-IDKR  139 (313)
T ss_dssp             CCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC--C------CCCSSTTHHH-HHHH
T ss_pred             Cccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc--c------cCCCCCcchH-HHHH
Confidence            985322           137888999999999998 7 6764 3   455322111  1      12222 3568 9999


Q ss_pred             HHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHH----HHhCCCeEEecCCCceeeceecccccC
Q 019794          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQ----AIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       265 ~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~----~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.+++.    .+++++++||+.++|+...        .+...    ...++.+.++++++..++|+|++|+|+
T Consensus       140 ~~e~~~~~----~g~~~~ilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~  202 (313)
T 1qyd_A          140 KVRRAIEA----ASIPYTYVSSNMFAGYFAG--------SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT  202 (313)
T ss_dssp             HHHHHHHH----TTCCBCEEECCEEHHHHTT--------TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             HHHHHHHh----cCCCeEEEEeceecccccc--------ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence            99998853    5899999999998874321        11110    123344556788888999999999873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.84  E-value=1.7e-20  Score=166.61  Aligned_cols=166  Identities=15%  Similarity=0.044  Sum_probs=125.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccc--cch----------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDV--VEP----------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~--~~~----------  176 (335)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.....+.....  .....+.++.+|+  .++          
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            34578899999999999999999999999999999998754332211111  1123567888888  554          


Q ss_pred             --hccCCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCC
Q 019794          177 --ILLEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                        .+..+|+||||||..... .    ..+++...+++|+.|+.++++++.    +.+ .++|++||...+          
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~----------  156 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR----------  156 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT----------
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc----------
Confidence              234799999999974321 1    223467899999999999999874    334 489999997765          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhC--CcEEEEEeCceeCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGP  292 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~--i~~~ivRp~~v~Gp  292 (335)
                            .+......|+.+|.+.+.+++.++.+++  ++++.+.||.|..+
T Consensus       157 ------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~  200 (252)
T 3f1l_A          157 ------QGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA  200 (252)
T ss_dssp             ------SCCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred             ------cCCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence                  2334456899999999999999998863  99999999998653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.84  E-value=1.7e-20  Score=168.44  Aligned_cols=167  Identities=10%  Similarity=0.001  Sum_probs=129.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh-----------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----------  177 (335)
                      .+.+++|+|+||||+|+||++++++|+++|++|++++|+.....+.+...+  ...++.++.+|+.++.           
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999996443322222211  2357889999998751           


Q ss_pred             -ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          178 -LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                       ..++|+||||||.......    .+++...+++|+.++.++++++.+    .+. ++|++||...+             
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------------  170 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGE-------------  170 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-------------
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhc-------------
Confidence             2479999999997654332    235678999999999999887743    343 89999997665             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         .+..+...|+.+|.+.+.+++.++.+   .++++++++||.|..+.
T Consensus       171 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (271)
T 4iin_A          171 ---RGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM  216 (271)
T ss_dssp             ---HCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred             ---CCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence               23344578999999999999999887   58999999999998764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.84  E-value=7e-21  Score=169.57  Aligned_cols=162  Identities=20%  Similarity=0.218  Sum_probs=121.7

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----------cc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----------LL  179 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~  179 (335)
                      .+.+++|+++||||+|+||++++++|+++|++|++++|.....    .... ...+.++.+|+.++.           +.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV----VADL-GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH----HHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH----HHhc-CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4557789999999999999999999999999999999843221    1111 356888999997751           24


Q ss_pred             CCCEEEEccCCCCCC--------CccCChhhHHhhHHHHHHHHHHHHHHc------------C-CeEEEEecccccCCCC
Q 019794          180 EVDQIYHLACPASPV--------HYKYNPVKTIKTNVMGTLNMLGLAKRV------------G-AKFLLTSTSEVYGDPL  238 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~~a~~~------------~-~r~v~iSS~~v~~~~~  238 (335)
                      .+|+||||||.....        ...+++...+++|+.++.++++++...            + .++|++||...+.   
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  155 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD---  155 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C---
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC---
Confidence            799999999964321        223457889999999999999988642            2 2799999986652   


Q ss_pred             CCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                   +......|+.+|.+.+.+++.++.+.   |+++++++||.|..+.
T Consensus       156 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~  200 (257)
T 3tl3_A          156 -------------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL  200 (257)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             -------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence                         22334679999999999999998874   8999999999998874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.84  E-value=3.5e-20  Score=166.84  Aligned_cols=165  Identities=19%  Similarity=0.131  Sum_probs=127.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC---------Ccccc---ccc--cCCCceEEEeccccch--
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG---------RKDNL---VHH--FRNPRFELIRHDVVEP--  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~---------~~~~~---~~~--~~~~~~~~~~~D~~~~--  176 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|....         ..+.+   ...  .....+.++.+|+.++  
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4678999999999999999999999999999999985321         11111   111  1235788899999875  


Q ss_pred             ----------hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCC
Q 019794          177 ----------ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGD  236 (335)
Q Consensus       177 ----------~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~  236 (335)
                                .+..+|+||||||.......    .++++..+++|+.|+.++++++..    .+  .+||++||...+. 
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-  166 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK-  166 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC-
Confidence                      23569999999997654332    235778999999999999988643    23  4899999987652 


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                     +......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       167 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  211 (277)
T 3tsc_A          167 ---------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM  211 (277)
T ss_dssp             ---------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred             ---------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence                           33345689999999999999999874   8999999999998874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.83  E-value=1.7e-20  Score=167.90  Aligned_cols=167  Identities=14%  Similarity=-0.060  Sum_probs=126.4

Q ss_pred             CCCCCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch----------
Q 019794          110 VGIGRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP----------  176 (335)
Q Consensus       110 ~~~~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~----------  176 (335)
                      .....++|+|+||||+  |+||++++++|+++|++|++++|+.... +.+... .....+.++.+|+.++          
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3456788999999999  9999999999999999999999874321 111111 1123477899999875          


Q ss_pred             --hccCCCEEEEccCCCCC----C-----CccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCC
Q 019794          177 --ILLEVDQIYHLACPASP----V-----HYKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~----~-----~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~  242 (335)
                        .+..+|+||||||....    .     ...+++...+++|+.++.++++++...   +.++|++||...+        
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~--------  158 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE--------  158 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT--------
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc--------
Confidence              12479999999997543    1     223356789999999999999998765   3489999997765        


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                              .+......|+.+|++.+.+++.++.+.   |+++++++||.|..+.
T Consensus       159 --------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  204 (271)
T 3ek2_A          159 --------RAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA  204 (271)
T ss_dssp             --------SBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred             --------cCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence                    233445789999999999999998874   8999999999998864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.83  E-value=6e-20  Score=161.52  Aligned_cols=165  Identities=13%  Similarity=0.055  Sum_probs=128.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-------ccCCCEE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------LLEVDQI  184 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------~~~vD~V  184 (335)
                      .++++|+++||||+++||+++++.|+++|++|++.+|+.......... ....++..+.+|+.++.       ..++|++
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            357899999999999999999999999999999999864321111111 12356788999998762       2459999


Q ss_pred             EEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          185 YHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       185 ih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |||||.......    .++|++.+++|+.|+..+++++.    +.+  .++|++||...+                .+..
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~----------------~g~~  147 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF----------------QGGI  147 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT----------------SCCS
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC----------------CCCC
Confidence            999997655443    33688999999999999998753    233  489999997654                2333


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.||.....+.+.++.|+   ||+++.|.||.|..+.
T Consensus       148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~  189 (247)
T 4hp8_A          148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN  189 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence            34689999999999999999874   8999999999997653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=2.6e-20  Score=167.85  Aligned_cols=167  Identities=15%  Similarity=0.061  Sum_probs=124.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccchh------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPI------------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------  177 (335)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.........   .......+.++.+|+.++.            
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3578899999999999999999999999999999986532221111   1111245788899997752            


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHH----HHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMG----TLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~g----t~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +.++|+||||||.......    .+++...+++|+.+    +..+++.+++.+   .+||++||...+..          
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~----------  178 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  178 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc----------
Confidence            2379999999996543332    23567899999999    566666666665   58999999877632          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp~  293 (335)
                          .+..+...|+.+|.+.+.+++.++.+     .++++++++||.|.++.
T Consensus       179 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          179 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             ----CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence                12233467999999999999988765     37999999999998763

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.83  E-value=4.7e-20  Score=162.62  Aligned_cols=154  Identities=18%  Similarity=0.091  Sum_probs=121.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------c--c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------L--L  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~--~  179 (335)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.....         .....+.+|+.++.            +  .
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999999999999999999754322         12456778887641            2  4


Q ss_pred             CCCEEEEccCCCCCCCc-----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|+||||||.......     .+++...+++|+.++.++++++.+.   +.++|++||...+.                
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  139 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------------  139 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc----------------
Confidence            79999999997543222     2346788999999999999998764   34899999987762                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+.     |+++++++||.+..+
T Consensus       140 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~  185 (241)
T 1dhr_A          140 GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP  185 (241)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence            23345689999999999999998764     599999999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-20  Score=168.55  Aligned_cols=161  Identities=20%  Similarity=0.184  Sum_probs=125.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------ccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~v  181 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ..+. .++.++.+|+.++.            +..+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV-AALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999998754322211 1111 46788899997751            2468


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |+||||||.......    .+++...+++|+.|+.++++++.+.   +.+||++||...++.                 .
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------------~  144 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-----------------F  144 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-----------------H
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-----------------C
Confidence            999999997543322    2346778999999999999998764   358999999876521                 1


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       145 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  186 (263)
T 2a4k_A          145 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  186 (263)
T ss_dssp             HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence            23579999999999999988764   8999999999999874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.83  E-value=4.9e-20  Score=164.81  Aligned_cols=165  Identities=12%  Similarity=0.007  Sum_probs=128.1

Q ss_pred             CCCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCCCCCc--cccccccCCCceEEEeccccchh-----------
Q 019794          113 GRRRLRIVVTGGAGF--VGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHFRNPRFELIRHDVVEPI-----------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~--IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (335)
                      .+++|+++||||+|+  ||++++++|+++|++|++++|+.....  ..+.......++.++.+|+.++.           
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            467889999999988  999999999999999999998743211  11122223347889999998751           


Q ss_pred             -ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC
Q 019794          178 -LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       178 -~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                       +..+|+||||||....    ..    ..+++...+++|+.++.++++++...   +.+||++||...+           
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------  152 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE-----------  152 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT-----------
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc-----------
Confidence             2479999999997542    11    12346778999999999999998765   2389999998765           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                           .+......|+.+|++.+.+++.++.+.   |+++++++||.|..+.
T Consensus       153 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (266)
T 3oig_A          153 -----LVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS  198 (266)
T ss_dssp             -----SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred             -----ccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence                 233445789999999999999998874   8999999999998864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.83  E-value=6e-20  Score=160.75  Aligned_cols=160  Identities=12%  Similarity=0.033  Sum_probs=121.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----cc----CCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----LL----EVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~----~vD~Vih  186 (335)
                      ||+|+||||+|+||++++++|+++|++|++++|+.....+... .+ ..++.++.+|+.+..     +.    ..|+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN-CL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            5689999999999999999999999999999997543322221 11 346778889987752     22    2499999


Q ss_pred             ccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          187 LACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       187 ~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      |||.......    .+++...+++|+.|+.++++++.+.    +.++|++||...+                .+......
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~----------------~~~~~~~~  142 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ----------------QPKAQEST  142 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT----------------SCCTTCHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC----------------CCCCCCch
Confidence            9997554332    2356789999999999999987653    3389999998776                23344578


Q ss_pred             HHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          259 YDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      |+.+|++.+.+++.++.+.   |++++.++||.|..+.
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  180 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF  180 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence            9999999999999999875   8999999999998763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.83  E-value=3.1e-20  Score=166.18  Aligned_cols=163  Identities=15%  Similarity=0.108  Sum_probs=129.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.  ..++..+.+|+.++            .+..
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999999765443332222  34667889999775            3467


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|++|||||.......    .++|+..+++|+.|+..+++++.+.   +.++|++||...+                .+.
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~----------------~~~  167 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS----------------TGT  167 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG----------------SCC
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc----------------cCC
Confidence            9999999997554443    2368899999999999999988653   2379999997654                233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.+...+.+.++.++   ||+++.|.||.|..+.
T Consensus       168 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~  210 (273)
T 4fgs_A          168 PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG  210 (273)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence            445689999999999999999875   7999999999997764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=8.5e-20  Score=165.11  Aligned_cols=163  Identities=12%  Similarity=0.034  Sum_probs=124.6

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---c---cccc--CCCceEEEeccccch------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---L---VHHF--RNPRFELIRHDVVEP------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~---~~~~--~~~~~~~~~~D~~~~------  176 (335)
                      .+.+++|+++||||+|+||++++++|+++|++|++++|+.....+.   +   ...+  ...++.++.+|+.++      
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4567889999999999999999999999999999999986543221   1   1111  134688999999875      


Q ss_pred             ------hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCC
Q 019794          177 ------ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       177 ------~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~  241 (335)
                            .+..+|+||||||.......    .+++...+++|+.|+.++++++.+.    + .++|++||...+..     
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----  158 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP-----  158 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC-----
Confidence                  13479999999997654332    2346788999999999999988654    3 38999999765421     


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCc
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFN  288 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~  288 (335)
                                .......|+.+|++.+.+++.++.+   .|+++++++||.
T Consensus       159 ----------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~  198 (285)
T 3sc4_A          159 ----------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT  198 (285)
T ss_dssp             ----------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence                      1123468999999999999999987   489999999994

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.83  E-value=3e-20  Score=164.19  Aligned_cols=159  Identities=19%  Similarity=0.167  Sum_probs=109.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----------hccCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----------ILLEVD  182 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~~vD  182 (335)
                      .++|+++||||+|+||++++++|++ |+.|++++|+....... .   ....+.++.+|+.++           .+.++|
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~-~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL-A---EIEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-H---TSTTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH-H---hhcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            4678999999999999999999988 99999999864332211 1   134678888888765           123699


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +||||||.......    .+++...+++|+.++.++++++.    +.+.++|++||...+.                +..
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  141 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----------------PHP  141 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------------------
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----------------CCC
Confidence            99999997554332    23467889999999998888764    3456899999987663                334


Q ss_pred             CCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       142 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  183 (245)
T 3e9n_A          142 GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM  183 (245)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence            4578999999999999999886   48999999999998864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.83  E-value=3.9e-20  Score=165.80  Aligned_cols=165  Identities=19%  Similarity=0.127  Sum_probs=124.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      ..++|+++||||+|+||++++++|+++|++|+++++......+.+....  ...++.++.+|+.++            .+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999998664433222222111  234688899999875            13


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      .++|+||||||........    ++++..+++|+.|+.++++++.+.   +.++|++||...+.                
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  167 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL----------------  167 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH----------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc----------------
Confidence            4799999999975443322    246788999999999999988764   24899999976652                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.+.   |++++++.||.|..+.
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (267)
T 3u5t_A          168 LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL  212 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence            23344689999999999999999885   8999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.83  E-value=4.1e-20  Score=164.28  Aligned_cols=167  Identities=17%  Similarity=0.100  Sum_probs=124.3

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------  176 (335)
                      ....++|+||||||+|+||++++++|+++|++|+++++............  .....+.++.+|+.+.            
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            33467789999999999999999999999999999885433322221111  1234688899999775            


Q ss_pred             hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          177 ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      .+.++|+||||||.......    .+++...+++|+.|+.++++++.    +.+. ++|++||...+             
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------------  154 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ-------------  154 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG-------------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc-------------
Confidence            23479999999997654332    23567899999999998887763    4454 89999997665             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       155 ---~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  200 (256)
T 3ezl_A          155 ---KGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM  200 (256)
T ss_dssp             ---GSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence               23344578999999999999999877   48999999999998763

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.83  E-value=3e-20  Score=167.28  Aligned_cols=166  Identities=15%  Similarity=0.061  Sum_probs=123.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+...... .....  ...++.++.+|+.+..            +
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK-AEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH-HHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999999997543221 11111  1246788999987751            2


Q ss_pred             cCCCEEEEccCCCCC-CCc-----cCChhhHHhhHHHHH----HHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASP-VHY-----KYNPVKTIKTNVMGT----LNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~-~~~-----~~~~~~~~~~Nv~gt----~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      ..+|+||||||.... ...     .+++...+++|+.|+    +++++.+++.+. +||++||...+..           
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  178 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV-----------  178 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC-----------
Confidence            359999999996544 221     234677899999995    456666666554 9999999765421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                         .+..+...|+.+|++.|.+++.++.+.   + ++++++||.+.++..
T Consensus       179 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~  224 (279)
T 3ctm_A          179 ---NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDIT  224 (279)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTT
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccc
Confidence               012344689999999999999998874   6 999999999988753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.83  E-value=2.5e-20  Score=166.93  Aligned_cols=166  Identities=13%  Similarity=-0.013  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+|+||||+|+||++++++|+++|++|+++++......+.....  .....+.++.+|+.++.            +
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999987765432221111111  12357889999998751            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH-----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK-----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~-----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|+||||||.......    .+++...+++|+.++.++++++.     +.+ .++|++||...+.             
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  169 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-------------  169 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-------------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-------------
Confidence            479999999997654332    23577899999999999999873     333 4899999976652             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                         +......|+.+|++.+.+.+.++.+.   |+++++++||.|.++..
T Consensus       170 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  215 (267)
T 4iiu_A          170 ---GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI  215 (267)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc
Confidence               23345789999999999999988775   89999999999998754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.83  E-value=2.8e-20  Score=169.01  Aligned_cols=164  Identities=12%  Similarity=-0.025  Sum_probs=125.8

Q ss_pred             CCCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGF--VGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~--IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~  177 (335)
                      .+++|+++||||+|+  ||++++++|+++|++|++++|+.... +.+... .....+.++.+|+.++            .
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999988  99999999999999999999873211 111111 0113578899999875            2


Q ss_pred             ccCCCEEEEccCCCCC----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASP----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +..+|+||||||....    ..    ..+++...+++|+.++.++++++.+.   +.+||++||...+.           
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------  175 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK-----------  175 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS-----------
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc-----------
Confidence            3479999999997541    11    23357789999999999999998764   23899999987652           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                           +......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       176 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  220 (293)
T 3grk_A          176 -----VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA  220 (293)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence                 33445789999999999999999874   8999999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.83  E-value=1.6e-20  Score=169.60  Aligned_cols=165  Identities=16%  Similarity=0.094  Sum_probs=122.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|++|||||+|+||++++++|+++|++|++++|+.....+.....  .....+.++.+|+.++.            +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457889999999999999999999999999999999754322211111  11223588999998752            3


Q ss_pred             cCCCEEEEccCCCCCC-C----ccCChhhHHhhHHHHHHHHHHHHHH----c---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASPV-H----YKYNPVKTIKTNVMGTLNMLGLAKR----V---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~-~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ..+|+||||||..... .    ..+++...+++|+.|+.++++++.+    .   +.+||++||...+            
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~------------  177 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ------------  177 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT------------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC------------
Confidence            4799999999975432 1    2335778999999999998887643    2   2489999997765            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                          .+......|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       178 ----~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  223 (281)
T 4dry_A          178 ----TPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM  223 (281)
T ss_dssp             ----CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred             ----CCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence                23445578999999999999999877   48999999999997753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.83  E-value=3.3e-20  Score=166.58  Aligned_cols=164  Identities=18%  Similarity=0.113  Sum_probs=121.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++|+|+||||+|+||++++++|+++|++|+++++......+.....+  ...++.++.+|+.+.            .+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999999887443222222211111  235788899999875            1247


Q ss_pred             CCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          181 VDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +|+||||||......     ..+++...+++|+.|+.++++++.+.        +.+||++||...+..           
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  173 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-----------  173 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC-----------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC-----------
Confidence            999999999754322     23356789999999999999987653        237999999766521           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          .......|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       174 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  218 (272)
T 4e3z_A          174 ----SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL  218 (272)
T ss_dssp             ----CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence                11123569999999999999998875   8999999999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=4.4e-20  Score=169.53  Aligned_cols=165  Identities=14%  Similarity=0.109  Sum_probs=127.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc--------ccccc---c--cCCCceEEEeccccchh--
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--------DNLVH---H--FRNPRFELIRHDVVEPI--  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--------~~~~~---~--~~~~~~~~~~~D~~~~~--  177 (335)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....        +.+..   .  ....++.++.+|+.++.  
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            467889999999999999999999999999999988633211        11110   0  12356888999998751  


Q ss_pred             ----------ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCC
Q 019794          178 ----------LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDP  237 (335)
Q Consensus       178 ----------~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~  237 (335)
                                +..+|+||||||......    ..+++...+++|+.|+.++++++..    .+  .+||++||...+   
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~---  199 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL---  199 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS---
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc---
Confidence                      347999999999765433    2235778999999999999998743    22  379999998765   


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                   .+......|+.+|.+.+.+++.++.+.   |+++++++||.|+++.
T Consensus       200 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          200 -------------RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence                         233445789999999999999999874   8999999999998863

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.83  E-value=1.1e-19  Score=164.17  Aligned_cols=163  Identities=17%  Similarity=0.089  Sum_probs=125.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+.. .. ...++.++.+|+.++            .+..
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE-VA-HGGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH-TBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-HH-cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            357889999999999999999999999999999998654322211 11 135788899999875            2357


Q ss_pred             CCEEEEccCCCCCCCc---------cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcC
Q 019794          181 VDQIYHLACPASPVHY---------KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +|+||||||.......         .+.+...+++|+.|+.++++++.+    .+.++|++||...+             
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~-------------  146 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGF-------------  146 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT-------------
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhc-------------
Confidence            9999999997533221         113677899999999999998754    34589999997765             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|.+.+.+++.++.+.  .++++.+.||.|..+.
T Consensus       147 ---~~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          147 ---YPNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             ---SSSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             ---cCCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence               233344679999999999999999875  3999999999998763

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.83  E-value=8.1e-20  Score=161.40  Aligned_cols=154  Identities=16%  Similarity=0.126  Sum_probs=122.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCccccccccCCCceEEEeccccchh----------ccCCCE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI----------LLEVDQ  183 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------~~~vD~  183 (335)
                      ++|+++||||+|+||++++++|++ .|+.|++++|.....         ...+.++.+|+.++.          ..++|+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~   73 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFDG   73 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999 788999988864321         234578889987751          127999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      ||||||.......    .+++...+++|+.|+.++++++.+.-   .++|++||...+                .+....
T Consensus        74 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~----------------~~~~~~  137 (244)
T 4e4y_A           74 IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF----------------IAKPNS  137 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT----------------CCCTTB
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc----------------cCCCCC
Confidence            9999997544332    23567899999999999999987642   379999998776                233445


Q ss_pred             ChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          257 SCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ..|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       138 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          138 FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence            68999999999999999875   48999999999998763

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.82  E-value=1.6e-19  Score=158.61  Aligned_cols=151  Identities=13%  Similarity=0.113  Sum_probs=103.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      ..++|+||||||+|+||++|+++|+++| ++|++++|+......     .....++++.+|+.++     ++.++|+|||
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----PYPTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----SCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----cccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            3457899999999999999999999999 899999997544322     1234788999999875     5678999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      +|+..       .       ....+.++++++++.+. +||++||..+|+..........   ...+    ..+...+..
T Consensus        95 ~a~~~-------~-------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~  153 (236)
T 3qvo_A           95 NLTGE-------D-------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN---NAVI----GEPLKPFRR  153 (236)
T ss_dssp             ECCST-------T-------HHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------------CGGGHHHHH
T ss_pred             cCCCC-------c-------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch---hhcc----cchHHHHHH
Confidence            99741       1       12356789999999887 8999999999875433221111   0011    123333444


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      +|..+    .+.+++++++|||.++++.
T Consensus       154 ~~~~l----~~~gi~~~~vrPg~i~~~~  177 (236)
T 3qvo_A          154 AADAI----EASGLEYTILRPAWLTDED  177 (236)
T ss_dssp             HHHHH----HTSCSEEEEEEECEEECCS
T ss_pred             HHHHH----HHCCCCEEEEeCCcccCCC
Confidence            45444    3469999999999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=7.3e-20  Score=163.80  Aligned_cols=159  Identities=18%  Similarity=0.185  Sum_probs=119.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---cccccCCCceEEEeccccchh------------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------~  178 (335)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....+.   +........+.++.+|+.++.            +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999875432211   111111246788999998751            2


Q ss_pred             cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHH----HHc----CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----KRV----GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|+||||||...    .+++...+++|+.++..+.+.+    ++.    +.+||++||...+.               
T Consensus        85 g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  145 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM---------------  145 (267)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred             CCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC---------------
Confidence            46899999998642    3578899999999877665554    333    23899999987763               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHH--hh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYH--RG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a--~~---~~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++  .+   .|+++++++||.+.++
T Consensus       146 -~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~  191 (267)
T 2gdz_A          146 -PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA  191 (267)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence             22334679999999999998753  33   4899999999999876

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.82  E-value=5.5e-20  Score=169.71  Aligned_cols=164  Identities=13%  Similarity=0.018  Sum_probs=125.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCCCccccccc--cCCCceEEEeccccchh-------------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHH--FRNPRFELIRHDVVEPI-------------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-------------  177 (335)
                      +++|++|||||+|+||++++++|+++|++|++++ |+.....+.....  ....++.++.+|+.+..             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5678999999999999999999999999999999 7643222111111  01246788888887643             


Q ss_pred             ----------------ccCCCEEEEccCCCCCCCc------------------cCChhhHHhhHHHHHHHHHHHHHH---
Q 019794          178 ----------------LLEVDQIYHLACPASPVHY------------------KYNPVKTIKTNVMGTLNMLGLAKR---  220 (335)
Q Consensus       178 ----------------~~~vD~Vih~A~~~~~~~~------------------~~~~~~~~~~Nv~gt~~ll~~a~~---  220 (335)
                                      +..+|+||||||.......                  .+++...+++|+.++.++++++..   
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                            2379999999997543322                  334567899999999999998753   


Q ss_pred             -cC-------CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          221 -VG-------AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       221 -~~-------~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                       .+       .+||++||...+.                +......|+.+|++.+.+++.++.+.   |+++++|+||.|
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v  267 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  267 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hcCCcCCCCCcEEEEECchhhcc----------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence             23       3899999987652                33445689999999999999998874   899999999999


Q ss_pred             eCCC
Q 019794          290 YGPR  293 (335)
Q Consensus       290 ~Gp~  293 (335)
                      .++.
T Consensus       268 ~T~~  271 (328)
T 2qhx_A          268 VLVD  271 (328)
T ss_dssp             SCCC
T ss_pred             cCCc
Confidence            8875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.82  E-value=2e-20  Score=167.20  Aligned_cols=165  Identities=13%  Similarity=0.055  Sum_probs=122.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc--ccccccc--CCCceEEEeccccch-----------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEP-----------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~-----------  176 (335)
                      ..+++|+++||||+|+||++++++|+++|++|++++|......  +.+...+  ...++.++.+|+.++           
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999987543211  1111111  135688899999875           


Q ss_pred             -hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          177 -ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       177 -~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                       .+.++|+||||||.......    .+++...+++|+.|+.++++++.+.   +.++|++||...+.             
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-------------  153 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-------------  153 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-------------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-------------
Confidence             12479999999997654432    2356788999999999999999874   24899999976653             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                         +......|+.+|++.+.+++.++.+.   |++++++.||.|..+
T Consensus       154 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (262)
T 3ksu_A          154 ---YTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS  197 (262)
T ss_dssp             ---HHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence               22234579999999999999999885   899999999998664

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.82  E-value=4.4e-20  Score=165.54  Aligned_cols=165  Identities=16%  Similarity=0.097  Sum_probs=126.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+++||||+|+||++++++|+++|++|+++++............  ....++.++.+|+.+..            +
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999985433222211111  12357889999998752            2


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|+||||||.......    .+++...+++|+.++.++++++..    .+ .++|++||...+               
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~---------------  166 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGS---------------  166 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH---------------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhc---------------
Confidence            479999999997654332    235678999999999999988743    34 389999997665               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|++.+.+++.++.+.   |+++++++||.|..+.
T Consensus       167 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  212 (269)
T 3gk3_A          167 -RGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAM  212 (269)
T ss_dssp             -HCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             -cCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence             233445789999999999999998774   8999999999998864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.82  E-value=8.4e-21  Score=173.96  Aligned_cols=178  Identities=19%  Similarity=0.310  Sum_probs=127.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~~  190 (335)
                      +++|+||||||+||++++++|+++|++|++++|+.......+. .+....++++.+|+.|+     ++.++|+|||+++.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-HhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            4589999999999999999999999999999997642221111 11224678899998774     56789999999974


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAE  267 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~~~E  267 (335)
                      .               ++.++.+++++|++.+ + +||+ |   +|+...    +|.     .+..+ ...| .+|..+|
T Consensus        90 ~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~sK~~~e  140 (318)
T 2r6j_A           90 P---------------QILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRI-----NALPPFEALI-ERKRMIR  140 (318)
T ss_dssp             G---------------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTC-----CCCHHHHHHH-HHHHHHH
T ss_pred             h---------------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccc-----cCCCCcchhH-HHHHHHH
Confidence            2               1456789999999998 7 6663 3   354321    111     12222 2468 9999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+++.    .+++++++||+.+++.        +++.++.....++.+.++++++..++|+|++|+|+
T Consensus       141 ~~~~~----~~~~~~~lr~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  196 (318)
T 2r6j_A          141 RAIEE----ANIPYTYVSANCFASY--------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGL  196 (318)
T ss_dssp             HHHHH----TTCCBEEEECCEEHHH--------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHH
T ss_pred             HHHHh----cCCCeEEEEcceehhh--------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHH
Confidence            88754    5899999999887653        23333333334556777888889999999999873

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.82  E-value=1.9e-19  Score=162.40  Aligned_cols=163  Identities=11%  Similarity=-0.002  Sum_probs=126.8

Q ss_pred             CCCCCeEEEEcCCch--hHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGF--VGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~--IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~  177 (335)
                      ..++|+|+||||+|+  ||++++++|+++|++|++++|+.  ..+.+... .....+.++.+|+.++            .
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            467889999999966  99999999999999999999975  11111111 0123578899999875            2


Q ss_pred             ccCCCEEEEccCCCCCC---------CccCChhhHHhhHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCC
Q 019794          178 LLEVDQIYHLACPASPV---------HYKYNPVKTIKTNVMGTLNMLGLAKRV----GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~---------~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                      +..+|+||||||.....         ...+++...+++|+.++.++++++...    +.++|++||...+          
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~----------  170 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE----------  170 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT----------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc----------
Confidence            34699999999975431         223356779999999999999988653    3489999998765          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                            .+......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       171 ------~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  216 (280)
T 3nrc_A          171 ------KAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA  216 (280)
T ss_dssp             ------SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred             ------cCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence                  23445578999999999999999877   48999999999999875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.82  E-value=6.3e-20  Score=163.12  Aligned_cols=161  Identities=14%  Similarity=0.104  Sum_probs=116.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch-------hccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP-------ILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~-------~~~~vD~Vih~  187 (335)
                      ||+++||||+|+||++++++|+++|++|++++|+....... ... ....++..++.+..+.       .+.++|+||||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-HHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            46899999999999999999999999999999875432211 110 0012222222222222       23579999999


Q ss_pred             cCCC-CCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          188 ACPA-SPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       188 A~~~-~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ||.. ....    ..+++...+++|+.|+.++++++.    +.+ .++|++||...+.                +.....
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~~  143 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----------------PWKELS  143 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----------------CCTTCH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc----------------CCCCch
Confidence            9975 3222    123567899999999999998874    333 4999999976652                223446


Q ss_pred             hHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          258 CYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .|+.+|.+.+.+++.++.+.   |+++++++||.|+|+.
T Consensus       144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~  182 (254)
T 1zmt_A          144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            89999999999999998774   8999999999998765

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.82  E-value=2.7e-20  Score=166.56  Aligned_cols=179  Identities=15%  Similarity=0.006  Sum_probs=127.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh------------ccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI------------LLE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (335)
                      ++|+|+||||+|+||++++++|++ .|++|++++|+............ ...++.++.+|+.+..            +.+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999999999 99999999997543221111110 1246788999998751            237


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCC-CC----------CCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGD-PL----------EHPQ  242 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~-~~----------~~~~  242 (335)
                      +|+||||||.......    .+++...+++|+.|+.++++++.+..   .+||++||...+.. ..          ....
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            9999999996543322    23567789999999999999998752   38999999766521 00          0111


Q ss_pred             CCCcCC--------------CCCCCCCCChHHHHHHHHHHHHHHHHhh-------hCCcEEEEEeCceeCCC
Q 019794          243 KETYWG--------------NVNPIGERSCYDEGKRTAETLTMDYHRG-------AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 ~E~~~~--------------~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-------~~i~~~ivRp~~v~Gp~  293 (335)
                      .|+.+.              ...+..+...|+.+|++.+.+++.++.+       .++++++++||.|.++.
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence            111100              0011123478999999999999998876       48999999999998875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.82  E-value=1e-20  Score=172.22  Aligned_cols=182  Identities=17%  Similarity=0.258  Sum_probs=126.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC-CCc--ccc--ccccCCCceEEEeccccch-----hccCCCEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT-GRK--DNL--VHHFRNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~-~~~--~~~--~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ||+|+||||||+||++|+++|+++|++|++++|+.. ...  +..  ...+....++++.+|+.++     ++.++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            678999999999999999999999999999999751 111  110  0111224678899998774     567899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEG  262 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~s  262 (335)
                      |+|+...               +.++.+++++|++.+ + +||+ |   +||...    +|.     .+..+ ...| .+
T Consensus        82 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~s  132 (307)
T 2gas_A           82 CAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRH-----DAVEPVRQVF-EE  132 (307)
T ss_dssp             ECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-HH
T ss_pred             ECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccc-----cCCCcchhHH-HH
Confidence            9997521               456789999999998 7 6763 3   454321    111     12222 3578 99


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|.+++.    .+++++++||+.+++....    .+... ......++.+.++++++..++|+|++|+|+
T Consensus       133 K~~~e~~~~~----~~i~~~~lrp~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  196 (307)
T 2gas_A          133 KASIRRVIEA----EGVPYTYLCCHAFTGYFLR----NLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGT  196 (307)
T ss_dssp             HHHHHHHHHH----HTCCBEEEECCEETTTTGG----GTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHH
T ss_pred             HHHHHHHHHH----cCCCeEEEEcceeeccccc----ccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHH
Confidence            9999988754    5899999999998886421    11000 001123445677788888999999999873

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.82  E-value=6.7e-20  Score=161.98  Aligned_cols=164  Identities=16%  Similarity=0.101  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc--ccCCCceEEEeccc--cch------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDV--VEP------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~--~~~------------  176 (335)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+....  ........++..|+  .+.            
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999975433221111  11223455666655  443            


Q ss_pred             hccCCCEEEEccCCCCCCC-----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          177 ILLEVDQIYHLACPASPVH-----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      .+.++|+||||||......     ..+++...+++|+.|+.++++++.    +.+. ++|++||...+            
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------  158 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR------------  158 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT------------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc------------
Confidence            2347999999999743322     223577899999999999999884    3333 89999997665            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh----CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~----~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|.+.+.+++.++.+.    +++++.++||.+..+
T Consensus       159 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~  204 (247)
T 3i1j_A          159 ----KGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG  204 (247)
T ss_dssp             ----SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred             ----CCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence                233445789999999999999998773    799999999988653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.82  E-value=1.1e-19  Score=161.45  Aligned_cols=163  Identities=13%  Similarity=0.053  Sum_probs=114.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----h---c-cCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I---L-LEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~---~-~~vD~Vih  186 (335)
                      ||+|+||||+|+||++++++|+++|++|++++|+......           + +.+|+.+.     .   + .++|+|||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            4689999999999999999999999999999997543221           1 45566543     2   2 56799999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCC-----cCC-------C
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKET-----YWG-------N  249 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~-----~~~-------~  249 (335)
                      |||....   ...++..+++|+.|+.++++++.+    .+ .++|++||...+.........+.     .+.       .
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           69 CAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence            9986431   245889999999999999998853    33 48999999887732111100000     000       0


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      ..+..+...|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  192 (257)
T 1fjh_A          146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence            012223468999999999999998876   48999999999998874

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.82  E-value=5e-21  Score=175.59  Aligned_cols=180  Identities=18%  Similarity=0.300  Sum_probs=127.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC-CCCcc-cc--ccccCCCceEEEeccccch-----hccCCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKD-NL--VHHFRNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~-~~~~~-~~--~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ++|+|+||||||+||++++++|+++|++|++++|+. ..... ..  ...+....++++.+|+.++     ++.++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            467899999999999999999999999999999975 21111 10  0111234678999998774     567899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEG  262 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~s  262 (335)
                      |+|+..               ++.++.+++++|++.+ + +|| .|   +|+...    +|.     .+..+ .+.| .+
T Consensus        83 ~~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~~----~~~-----~~~~p~~~~y-~s  133 (321)
T 3c1o_A           83 SALPFP---------------MISSQIHIINAIKAAGNIKRFL-PS---DFGCEE----DRI-----KPLPPFESVL-EK  133 (321)
T ss_dssp             ECCCGG---------------GSGGGHHHHHHHHHHCCCCEEE-CS---CCSSCG----GGC-----CCCHHHHHHH-HH
T ss_pred             ECCCcc---------------chhhHHHHHHHHHHhCCccEEe-cc---ccccCc----ccc-----ccCCCcchHH-HH
Confidence            999742               1566789999999998 7 676 22   454321    121     12222 3568 99


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHH---HHHhCCCeEEecCCCceeeceecccccC
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA---QAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~---~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |..+|.+++.    .+++++++||+.+++..        .+.+..   ....++.+..+++++..++|+|++|+|+
T Consensus       134 K~~~e~~~~~----~~~~~~~lrp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (321)
T 3c1o_A          134 KRIIRRAIEA----AALPYTYVSANCFGAYF--------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAK  197 (321)
T ss_dssp             HHHHHHHHHH----HTCCBEEEECCEEHHHH--------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHH
T ss_pred             HHHHHHHHHH----cCCCeEEEEeceecccc--------ccccccccccccccCceEEecCCCcceeEeeHHHHHH
Confidence            9999998854    58999999999887742        222222   1124556777889999999999999873

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.82  E-value=2.3e-19  Score=161.32  Aligned_cols=164  Identities=11%  Similarity=0.027  Sum_probs=124.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---ccc---c--cCCCceEEEeccccchh------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVH---H--FRNPRFELIRHDVVEPI------  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~---~--~~~~~~~~~~~D~~~~~------  177 (335)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.......   +..   .  ....++.++.+|+.++.      
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            346789999999999999999999999999999999986542211   110   0  01356788999998762      


Q ss_pred             ------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCC
Q 019794          178 ------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       178 ------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~  242 (335)
                            +..+|+||||||.......    .+++...+++|+.|+.++++++..    .+ .++|++||...+...     
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  156 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-----  156 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-----
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----
Confidence                  3479999999997544332    235678999999999999998754    23 489999997654210     


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                               +......|+.+|.+.+.+++.++.+.   |++++++.||.+
T Consensus       157 ---------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~  197 (274)
T 3e03_A          157 ---------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTV  197 (274)
T ss_dssp             ---------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBC
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcc
Confidence                     02234679999999999999998874   899999999953

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.81  E-value=1e-19  Score=165.11  Aligned_cols=164  Identities=13%  Similarity=0.018  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEe-cCCCCCccccccc--cCCCceEEEeccccchh-------------
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHH--FRNPRFELIRHDVVEPI-------------  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-------------  177 (335)
                      +++|+++||||+|+||++++++|+++|++|++++ |+...........  ....++.++.+|+.+..             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            5678999999999999999999999999999999 7643222111111  11346788888887643             


Q ss_pred             ----------------ccCCCEEEEccCCCCCCCc------------------cCChhhHHhhHHHHHHHHHHHHHH---
Q 019794          178 ----------------LLEVDQIYHLACPASPVHY------------------KYNPVKTIKTNVMGTLNMLGLAKR---  220 (335)
Q Consensus       178 ----------------~~~vD~Vih~A~~~~~~~~------------------~~~~~~~~~~Nv~gt~~ll~~a~~---  220 (335)
                                      +..+|+||||||.......                  .+++...+++|+.++.++++++.+   
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                            2379999999997543222                  334567899999999999998753   


Q ss_pred             -cC-------CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          221 -VG-------AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       221 -~~-------~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                       .+       .+||++||...+.                +......|+.+|.+.+.+.+.++.+.   |+++++++||.|
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  230 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  230 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hcCCCCCCCCcEEEEEechhhcC----------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCc
Confidence             33       4899999987652                33445789999999999999998774   899999999998


Q ss_pred             eCCC
Q 019794          290 YGPR  293 (335)
Q Consensus       290 ~Gp~  293 (335)
                      ..+.
T Consensus       231 ~T~~  234 (291)
T 1e7w_A          231 VLVD  234 (291)
T ss_dssp             CCGG
T ss_pred             cCCc
Confidence            7653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.81  E-value=1.3e-19  Score=163.90  Aligned_cols=164  Identities=12%  Similarity=0.078  Sum_probs=124.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc--ccCCCceEEEeccccchh------------c
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVVEPI------------L  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~------------~  178 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+..........  ......+.++.+|+.+..            +
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35688999999999999999999999999999999975432221111  112236788999998751            2


Q ss_pred             cCCCEEEEc-cCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHL-ACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~-A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .++|+|||| ||.......   .+++...+++|+.|+.++++++.+    .+.++|++||...+.               
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------------  169 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV---------------  169 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS---------------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc---------------
Confidence            479999999 564332211   234577899999999999988754    345999999987652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                       +......|+.+|.+.+.+++.++.+.     ++++++++||.+.++
T Consensus       170 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~  215 (286)
T 1xu9_A          170 -AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  215 (286)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence             23345789999999999999988765     899999999999775

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.81  E-value=6.4e-19  Score=157.09  Aligned_cols=156  Identities=17%  Similarity=0.170  Sum_probs=121.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +++++|+++||||+++||++++++|+++|++|++.+|+....   .      .....+.+|+.++            .+.
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---L------PEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---S------CTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---C------CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999964321   1      1123577888765            356


Q ss_pred             CCCEEEEccCCCCCC--C----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          180 EVDQIYHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+|++|||||.....  .    ..++|...+++|+.++..+++++.    +.+. ++|++||...+              
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~--------------  143 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV--------------  143 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT--------------
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc--------------
Confidence            799999999964322  1    234678899999999999988764    3343 89999997654              


Q ss_pred             CCCCCC-CCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIG-ERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~-~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+.. ....|+.+|.+.+.+.+.++.+.   ||+++.|.||.|..+
T Consensus       144 --~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~  189 (261)
T 4h15_A          144 --LPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE  189 (261)
T ss_dssp             --SCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             --cCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence              2222 24679999999999999999874   899999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.81  E-value=8.5e-19  Score=162.74  Aligned_cols=165  Identities=12%  Similarity=0.005  Sum_probs=126.8

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc------cccc--cCCCceEEEeccccchh-----
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN------LVHH--FRNPRFELIRHDVVEPI-----  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~------~~~~--~~~~~~~~~~~D~~~~~-----  177 (335)
                      ...+++|+||||||+|+||++++++|+++|++|++++|+.......      ....  ....++.++.+|+.++.     
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            3457889999999999999999999999999999999986643221      1111  12346888999998761     


Q ss_pred             -------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCC
Q 019794          178 -------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHP  241 (335)
Q Consensus       178 -------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~  241 (335)
                             +.++|+||||||.......    .+++...+++|+.|+.++++++..    .+ .+||++||...+..     
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~-----  194 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP-----  194 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC-----
Confidence                   3479999999997554332    234678999999999999999854    23 48999999765421     


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCce
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNT  289 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v  289 (335)
                               .+......|+.+|++.+.+++.++.+.  +++++++.||.+
T Consensus       195 ---------~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~  235 (346)
T 3kvo_A          195 ---------VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTA  235 (346)
T ss_dssp             ---------GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBC
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence                     113345689999999999999999885  799999999963

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.81  E-value=2.3e-19  Score=165.47  Aligned_cols=162  Identities=19%  Similarity=0.131  Sum_probs=122.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc--cc-----cCCCceEEEeccccchh-----c-----
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV--HH-----FRNPRFELIRHDVVEPI-----L-----  178 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~--~~-----~~~~~~~~~~~D~~~~~-----~-----  178 (335)
                      +|+|+||||+|+||++++++|+++|++|++++|+.........  ..     ....++.++.+|+.++.     +     
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            5789999999999999999999999999888886543322111  00     01246889999998751     2     


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+.              
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~--------------  147 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--------------  147 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--------------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc--------------
Confidence            359999999996543322    2356789999999999999986    33444 899999987652              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|++.+.+++.++.+   .|+++++|+||.|..+.
T Consensus       148 --~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          148 --GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence              2233468999999999999999876   58999999999998764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.81  E-value=9.5e-21  Score=172.55  Aligned_cols=182  Identities=18%  Similarity=0.308  Sum_probs=127.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC--cccc--ccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR--KDNL--VHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~--~~~~--~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      +|+|+||||||+||++++++|+++|++|++++|+....  ....  ...+....++++.+|+.++     ++.++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999975432  1111  1112245688999998774     5678999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCC-CChHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGK  263 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK  263 (335)
                      +|+..               ++.++.+++++|++.+ + +||+ |   +||...    +|.     .+..+ ...| .+|
T Consensus        84 ~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~sK  134 (308)
T 1qyc_A           84 TVGSL---------------QIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNV-----HAVEPAKSVF-EVK  134 (308)
T ss_dssp             CCCGG---------------GSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-HHH
T ss_pred             CCcch---------------hhhhHHHHHHHHHhcCCCceEee-c---ccccCc----ccc-----ccCCcchhHH-HHH
Confidence            99742               2456789999999998 7 6663 3   344221    111     22223 3468 999


Q ss_pred             HHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       264 ~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..+|.+++.    .+++++++||+.++|....    .+.. .......++.+.++++++..++|+|++|+|+
T Consensus       135 ~~~e~~~~~----~~~~~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  197 (308)
T 1qyc_A          135 AKVRRAIEA----EGIPYTYVSSNCFAGYFLR----SLAQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGT  197 (308)
T ss_dssp             HHHHHHHHH----HTCCBEEEECCEEHHHHTT----TTTC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred             HHHHHHHHh----cCCCeEEEEeceecccccc----cccc-ccccCCCCCceEEecCCCceEEEecHHHHHH
Confidence            999988864    5899999999999885321    0000 0001123456777889999999999999873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.81  E-value=5e-19  Score=157.59  Aligned_cols=166  Identities=13%  Similarity=0.062  Sum_probs=128.1

Q ss_pred             CCCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCcccc--ccccCCCceEEEeccccch-----------
Q 019794          112 IGRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEP-----------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~-----------  176 (335)
                      +++++|+++||||+|  +||.+++++|+++|++|++.+|+.+...+..  .......++..+.+|+.++           
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            357899999999887  8999999999999999999999765433221  1223445788899999875           


Q ss_pred             -hccCCCEEEEccCCCCCCCc--------cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCC
Q 019794          177 -ILLEVDQIYHLACPASPVHY--------KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       177 -~~~~vD~Vih~A~~~~~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                       .+..+|++|||||.......        .+++...+++|+.++..+.+++...   +.++|++||....          
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~----------  151 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----------  151 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT----------
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc----------
Confidence             34679999999996543221        1234567889999999888887654   2389999997654          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                            .+......|+.+|.+.+.+.+.++.|.   ||+++.|.||.|..+.
T Consensus       152 ------~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~  197 (256)
T 4fs3_A          152 ------FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLS  197 (256)
T ss_dssp             ------SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred             ------cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChh
Confidence                  233445789999999999999999874   8999999999987754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.80  E-value=2.4e-19  Score=161.59  Aligned_cols=163  Identities=21%  Similarity=0.163  Sum_probs=124.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----------ccC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----------LLE  180 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~  180 (335)
                      ...++|+++||||+|+||++++++|+++|++|++++|+.....+... .+ ..++.++.+|+.+..           +.+
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~-~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD-EL-GNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            34678899999999999999999999999999999987543322221 12 356889999997751           236


Q ss_pred             CCEEEEc-cCCCCCCCc---------cCChhhHHhhHHHHHHHHHHHHHHc----------C-CeEEEEecccccCCCCC
Q 019794          181 VDQIYHL-ACPASPVHY---------KYNPVKTIKTNVMGTLNMLGLAKRV----------G-AKFLLTSTSEVYGDPLE  239 (335)
Q Consensus       181 vD~Vih~-A~~~~~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~----------~-~r~v~iSS~~v~~~~~~  239 (335)
                      +|+|||| |+.......         .+++...+++|+.++.++++++...          + .+||++||...+     
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  178 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY-----  178 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT-----
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc-----
Confidence            8999999 443322211         1236789999999999999987531          2 389999998776     


Q ss_pred             CCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                                 .+......|+.+|++.+.+++.++.+.   |+++++++||.|..+
T Consensus       179 -----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  223 (281)
T 3ppi_A          179 -----------EGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP  223 (281)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             -----------CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence                       233445789999999999999998874   899999999999775

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.80  E-value=1.7e-19  Score=159.31  Aligned_cols=159  Identities=15%  Similarity=0.112  Sum_probs=116.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEE-e--cCCCCCccccccccCCCceEEEeccccch-------hccCCCEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVI-D--NFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIY  185 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~vD~Vi  185 (335)
                      +|+++||||+|+||++++++|+++|++|+++ +  |+....... ...+  ...++.+.+..+.       .+.++|+||
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~-~~~~--~~~~~~~~~~v~~~~~~~~~~~g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF-ESEN--PGTIALAEQKPERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHS--TTEEECCCCCGGGHHHHHGGGSSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHH-HHHh--CCCcccCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4799999999999999999999999999999 5  764322211 1111  1233333322222       235799999


Q ss_pred             EccCCCCC---CCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          186 HLACPASP---VHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       186 h~A~~~~~---~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ||||....   ...    .+++...+++|+.++.++++++.    +.+ .+||++||...+.                +.
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~  141 (244)
T 1zmo_A           78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK----------------PL  141 (244)
T ss_dssp             ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------------CC
T ss_pred             ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC----------------CC
Confidence            99997544   222    23567899999999999998875    344 3899999987652                23


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .....|+.+|.+.+.+++.++.+.   |+++++++||.|..+.
T Consensus       142 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  184 (244)
T 1zmo_A          142 AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT  184 (244)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence            344679999999999999998774   8999999999997764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.80  E-value=1.8e-19  Score=165.77  Aligned_cols=163  Identities=16%  Similarity=0.066  Sum_probs=123.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC---------CCcccccccc--CCCceEEEeccccchh----
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT---------GRKDNLVHHF--RNPRFELIRHDVVEPI----  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~---------~~~~~~~~~~--~~~~~~~~~~D~~~~~----  177 (335)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..         ...+.....+  ...++.++.+|+.++.    
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            467889999999999999999999999999999998621         0111111111  2346788899998751    


Q ss_pred             --------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----------CCeEEEEeccccc
Q 019794          178 --------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----------GAKFLLTSTSEVY  234 (335)
Q Consensus       178 --------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----------~~r~v~iSS~~v~  234 (335)
                              +..+|+||||||.......    .+++...+++|+.|+.++++++...           +.+||++||...+
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence                    2479999999997654332    2357789999999999999987432           1489999997665


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       235 ~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .                +......|+.+|++.+.+++.++.+   .|+++++|+|| +..+
T Consensus       184 ~----------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~  227 (322)
T 3qlj_A          184 Q----------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR  227 (322)
T ss_dssp             H----------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred             c----------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence            2                2334468999999999999999987   58999999999 6443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.80  E-value=1.5e-19  Score=164.73  Aligned_cols=176  Identities=15%  Similarity=0.044  Sum_probs=126.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch-h------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP-I------------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-~------------  177 (335)
                      ..++|+|+||||+|+||++++++|+++|++|++++|+.....+.....  ....++.++.+|+.+. .            
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999765433222211  1234788999999875 1            


Q ss_pred             ccCCCEEEEccCCCCCC----------------------------------CccCChhhHHhhHHHHHHHHHHHHHH---
Q 019794          178 LLEVDQIYHLACPASPV----------------------------------HYKYNPVKTIKTNVMGTLNMLGLAKR---  220 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~----------------------------------~~~~~~~~~~~~Nv~gt~~ll~~a~~---  220 (335)
                      +..+|+||||||.....                                  ...+.+...+++|+.|+.++++++..   
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            24799999999975321                                  01223567799999999999998754   


Q ss_pred             -cC-CeEEEEecccccCCCCCC--------------------------------CCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          221 -VG-AKFLLTSTSEVYGDPLEH--------------------------------PQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       221 -~~-~r~v~iSS~~v~~~~~~~--------------------------------~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                       .+ .+||++||...+......                                ...+.     ........|+.||++.
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Y~~SK~a~  243 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETN-----GWPSFGAAYTTSKACL  243 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTT-----TCCSSCHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccc-----cCcccchhhHHHHHHH
Confidence             23 489999997654221000                                00001     1112346799999999


Q ss_pred             HHHHHHHHhhh-CCcEEEEEeCceeCCC
Q 019794          267 ETLTMDYHRGA-GVEVRIARIFNTYGPR  293 (335)
Q Consensus       267 E~l~~~~a~~~-~i~~~ivRp~~v~Gp~  293 (335)
                      +.+++.++.++ ++++++++||.|..+-
T Consensus       244 ~~~~~~la~e~~~i~v~~v~PG~v~T~~  271 (311)
T 3o26_A          244 NAYTRVLANKIPKFQVNCVCPGLVKTEM  271 (311)
T ss_dssp             HHHHHHHHHHCTTSEEEEECCCSBCSGG
T ss_pred             HHHHHHHHhhcCCceEEEecCCceecCC
Confidence            99999999885 7999999999998764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.80  E-value=5.9e-19  Score=157.76  Aligned_cols=168  Identities=12%  Similarity=0.029  Sum_probs=128.2

Q ss_pred             CCCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCCCCCccc-cccc--cCCCceEEEeccccch----------
Q 019794          112 IGRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHH--FRNPRFELIRHDVVEP----------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-~~~~--~~~~~~~~~~~D~~~~----------  176 (335)
                      ...++|+++||||+  |+||++++++|+++|++|++++|+....... ..+.  ....++.++.+|+.+.          
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            35678999999999  8999999999999999999999876543121 1111  1135788889999775          


Q ss_pred             --hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCC
Q 019794          177 --ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVG-AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~-~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                        .+..+|+||||||.......    .+++...+++|+.|+.++++++    ++.+ .++|++||...+..         
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------  166 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA---------  166 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccccc---------
Confidence              23478999999997654332    2356789999999999999987    3334 48999999765421         


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhC--CcEEEEEeCceeCCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGPR  293 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~--i~~~ivRp~~v~Gp~  293 (335)
                           ........|+.+|++.+.+++.++.+.+  ++++.+.||.|..+.
T Consensus       167 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~  211 (267)
T 3gdg_A          167 -----NFPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL  211 (267)
T ss_dssp             -----CSSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC
T ss_pred             -----CCCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch
Confidence                 1112346899999999999999998863  899999999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.80  E-value=3.6e-19  Score=157.91  Aligned_cols=165  Identities=13%  Similarity=0.065  Sum_probs=125.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccchh------------c-
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEPI------------L-  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~-  178 (335)
                      .++|+++||||+|+||++++++|+++|++|+++++......+.....+  ....+..+.+|+.+..            + 
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            567899999999999999999999999999987554332222211111  2346778888987651            1 


Q ss_pred             -----cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          179 -----LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 -----~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                           ..+|+||||||.......    .+.++..+++|+.|+.++++++.+.   +.++|++||...+            
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~------------  152 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR------------  152 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT------------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc------------
Confidence                 139999999997544332    2246778999999999999998764   3489999998765            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~  294 (335)
                          .+......|+.+|++.+.+++.++.+.   |+++++++||.+..+..
T Consensus       153 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  199 (255)
T 3icc_A          153 ----ISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN  199 (255)
T ss_dssp             ----SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred             ----cCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence                233445789999999999999998874   89999999999988753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.79  E-value=8e-19  Score=156.46  Aligned_cols=163  Identities=13%  Similarity=0.004  Sum_probs=122.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccchh-------------cc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEPI-------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-------------~~  179 (335)
                      +++|+++||||+|+||++++++|+++|++|++++|+............ ...++.++.+|+.++.             +.
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999999986543221111110 1246788899997751             45


Q ss_pred             CCCEEEEccCC--C-------CC--CCccCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCC
Q 019794          180 EVDQIYHLACP--A-------SP--VHYKYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQK  243 (335)
Q Consensus       180 ~vD~Vih~A~~--~-------~~--~~~~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~  243 (335)
                      .+|+||||||.  .       .+  ....+.+...+++|+.++.++.+++.    +.+ .++|++||...+..       
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  155 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY-------  155 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence            68999999952  1       11  11233567899999999988887764    334 48999999876521       


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                                .+...|+.+|.+.+.+++.++.+   .|+++++++||.|..+.
T Consensus       156 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          156 ----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                      12367999999999999999876   48999999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.79  E-value=4.2e-19  Score=159.15  Aligned_cols=161  Identities=13%  Similarity=0.072  Sum_probs=123.3

Q ss_pred             CCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          114 RRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       114 ~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      +++|+++||||  +|+||++++++|+++|++|++++|+.....+.+...+ ..++.++.+|+.++.            +.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46789999999  9999999999999999999999987543212222222 235678889997751            23


Q ss_pred             ---CCCEEEEccCCCCC-----CC----ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCC
Q 019794          180 ---EVDQIYHLACPASP-----VH----YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       180 ---~vD~Vih~A~~~~~-----~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                         ++|+||||||....     ..    ..+++...+++|+.++.++++++.+.   +.++|++||...++         
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~---------  154 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA---------  154 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC---------
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc---------
Confidence               89999999997541     11    12356778999999999999998764   24899999865432         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                              ......|+.+|.+.+.+++.++.+.   |+++++++||.|..+
T Consensus       155 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          155 --------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             --------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             --------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence                    2234679999999999999998874   899999999998664

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.79  E-value=4.9e-19  Score=157.71  Aligned_cols=163  Identities=13%  Similarity=-0.020  Sum_probs=124.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCCCccccccc---cCCCceEEEeccccchh---------c
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLID---RGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEPI---------L  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~---------~  178 (335)
                      +++|+++||||+|+||++++++|++   +|++|++++|+.....+.....   ....++.++.+|+.++.         .
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999   8999999999754322211111   11346888999998751         1


Q ss_pred             -----cCCC--EEEEccCCCCC--C-----CccCChhhHHhhHHHHHHHHHHHHHHc------C-CeEEEEecccccCCC
Q 019794          179 -----LEVD--QIYHLACPASP--V-----HYKYNPVKTIKTNVMGTLNMLGLAKRV------G-AKFLLTSTSEVYGDP  237 (335)
Q Consensus       179 -----~~vD--~Vih~A~~~~~--~-----~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~-~r~v~iSS~~v~~~~  237 (335)
                           ..+|  +||||||....  .     ...+++...+++|+.|+.++++++.+.      + .+||++||...+   
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~---  160 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL---  160 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT---
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc---
Confidence                 2478  99999997532  1     122457789999999999999998653      2 379999998776   


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh-CCcEEEEEeCceeCC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGP  292 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~ivRp~~v~Gp  292 (335)
                                   .+......|+.+|.+.+.+++.++.+. +++++.+.||.+-.+
T Consensus       161 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          161 -------------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             -------------CCCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence                         233445789999999999999999886 599999999988543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.77  E-value=1.3e-17  Score=151.57  Aligned_cols=165  Identities=14%  Similarity=0.036  Sum_probs=116.1

Q ss_pred             CCCCCeEEEEcCC--chhHHHHHHHHHhCCCeEEEEecCC----------CCCccccccccCCC----ceEEEec-----
Q 019794          113 GRRRLRIVVTGGA--GFVGSHLVDKLIDRGDEVIVIDNFF----------TGRKDNLVHHFRNP----RFELIRH-----  171 (335)
Q Consensus       113 ~~~~~~vlVTGat--G~IG~~l~~~Ll~~g~~V~~~~r~~----------~~~~~~~~~~~~~~----~~~~~~~-----  171 (335)
                      .+++|+++||||+  |+||++++++|+++|++|++++|+.          ....+... .+...    ....+..     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSR-VLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhh-hhccccccccccccccceecc
Confidence            4578899999999  9999999999999999999998642          01111111 11110    0122221     


Q ss_pred             -------cccc--------h------------hccCCCEEEEccCCCC--CCC----ccCChhhHHhhHHHHHHHHHHHH
Q 019794          172 -------DVVE--------P------------ILLEVDQIYHLACPAS--PVH----YKYNPVKTIKTNVMGTLNMLGLA  218 (335)
Q Consensus       172 -------D~~~--------~------------~~~~vD~Vih~A~~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~~a  218 (335)
                             |+.+        +            .+.++|+||||||...  ...    ..+++...+++|+.|+.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                   1111        1            2346999999998532  111    22357789999999999999999


Q ss_pred             HHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCcee
Q 019794          219 KRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTY  290 (335)
Q Consensus       219 ~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~  290 (335)
                      .+.   +.++|++||...+.                +.... ..|+.+|.+.+.+++.++.+    .|+++++++||.|.
T Consensus       164 ~~~m~~~g~iv~isS~~~~~----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~  227 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASER----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHhccCceEEEEecccccc----------------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence            764   34899999976542                12222 47999999999999998876    58999999999999


Q ss_pred             CCCC
Q 019794          291 GPRM  294 (335)
Q Consensus       291 Gp~~  294 (335)
                      ++..
T Consensus       228 T~~~  231 (297)
T 1d7o_A          228 SRAA  231 (297)
T ss_dssp             CCCS
T ss_pred             cchh
Confidence            9863

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.76  E-value=3.1e-18  Score=157.26  Aligned_cols=160  Identities=14%  Similarity=0.097  Sum_probs=113.9

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC----C-c---cccccccCCCceEEEeccccch-------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG----R-K---DNLVHHFRNPRFELIRHDVVEP-------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~----~-~---~~~~~~~~~~~~~~~~~D~~~~-------  176 (335)
                      +.+++|+++||||+|+||++++++|+++|++|+++++....    + .   +.....+..... ...+|+.+.       
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHH
Confidence            34678999999999999999999999999999998764210    0 0   111111110000 112444332       


Q ss_pred             -----hccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEeccc-ccCCCCCCC
Q 019794          177 -----ILLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSE-VYGDPLEHP  241 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~-v~~~~~~~~  241 (335)
                           .+..+|+||||||......    ..++++..+++|+.|+.++++++.    +.+. +||++||.. .++.     
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~-----  158 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-----  158 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----
Confidence                 2357999999999755432    223577899999999999998873    3444 999999964 4432     


Q ss_pred             CCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCce
Q 019794          242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNT  289 (335)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v  289 (335)
                                  .....|+.+|.+.+.+++.++.+   .|+++++++||.+
T Consensus       159 ------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          159 ------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence                        23467999999999999999877   4899999999987

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.76  E-value=7.3e-18  Score=161.85  Aligned_cols=164  Identities=14%  Similarity=-0.002  Sum_probs=124.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------------cc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------------LL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (335)
                      ...++++++||||+|+||.++++.|+++|++|++++|+...  +.+........+.++.+|+.+..            +.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--HHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            34578999999999999999999999999999999885321  11111111224568889987751            23


Q ss_pred             C-CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 E-VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~-vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      + +|+||||||.......    .+++...+++|+.|+.++.+++...    + .+||++||...+.              
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~--------------  352 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA--------------  352 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH--------------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC--------------
Confidence            4 9999999997654332    2356789999999999999998775    3 3899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +......|+.+|...+.+++.++.+.   |++++++.||.|..+.
T Consensus       353 --g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  397 (454)
T 3u0b_A          353 --GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM  397 (454)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence              22344689999999999999988764   8999999999998764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.73  E-value=6.3e-18  Score=155.80  Aligned_cols=169  Identities=12%  Similarity=0.059  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCC-C-CccccccccCC-Cc--eEEEeccccchhccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFT-G-RKDNLVHHFRN-PR--FELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~-~-~~~~~~~~~~~-~~--~~~~~~D~~~~~~~~vD~  183 (335)
                      .|+|+||||+||||++++..|++.|+       +|+++++... . ........... ..  .++...+...+++.++|+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~   83 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence            46899999999999999999999986       8999987531 0 01000011000 01  123322333456789999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEeccc-ccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iSS~~-v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      |||+||.....  ..+....++.|+.++.++++++++.+ .  +++++|+.. +..     +..++.   .....+...|
T Consensus        84 Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~---~~~~~p~~~y  153 (327)
T 1y7t_A           84 ALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKN---APGLNPRNFT  153 (327)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHT---CTTSCGGGEE
T ss_pred             EEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHH---cCCCChhhee
Confidence            99999964322  35677899999999999999999875 3  677766532 110     011110   0123455679


Q ss_pred             HHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      +.+|...|++...+++..|++++++|+++|||+..
T Consensus       154 g~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          154 AMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             ECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             ccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            99999999999999988999999999999999863

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.70  E-value=1.2e-16  Score=154.66  Aligned_cols=163  Identities=20%  Similarity=0.302  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc--ccccccc--CCCceEEEeccccch-----hc-----
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEP-----IL-----  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~-----~~-----  178 (335)
                      ..+++||||||+|+||.+++++|+++|+ +|++++|+.....  +.+...+  ...++.++.+|+.|.     .+     
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999 5999998753211  1111111  134688899999875     12     


Q ss_pred             -cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccc-cCCCCCCCCCCCcCCCCC
Q 019794          179 -LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV-YGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       179 -~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v-~~~~~~~~~~E~~~~~~~  251 (335)
                       ..+|+|||+||.......    .+.+...+++|+.|+.++.+++...+. +||++||... ++.               
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~---------------  368 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA---------------  368 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC---------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC---------------
Confidence             246999999997544322    224567889999999999999988775 8999999654 332               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                        .....|+.+|...+.+.+.+. ..|+++++++||.++++++
T Consensus       369 --~g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm  408 (486)
T 2fr1_A          369 --PGLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGM  408 (486)
T ss_dssp             --TTCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC----
T ss_pred             --CCCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcc
Confidence              223679999999999988765 4599999999999988753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.69  E-value=2e-16  Score=153.89  Aligned_cols=162  Identities=17%  Similarity=0.218  Sum_probs=121.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc--ccccccc--CCCceEEEeccccch-----hc--cCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEP-----IL--LEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~-----~~--~~v  181 (335)
                      ..+++||||||+|+||.+++++|+++|+ +|++++|+.....  ..+...+  ...++.++.+|+.|.     .+  ..+
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            4578999999999999999999999999 6889988753211  1111111  134688899999885     23  349


Q ss_pred             CEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-CC-eEEEEecccc-cCCCCCCCCCCCcCCCCCCCC
Q 019794          182 DQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-GA-KFLLTSTSEV-YGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       182 D~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~-r~v~iSS~~v-~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      |+||||||.......    .+.+...+++|+.|+.++.+++... +. +||++||... ++.                 .
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~-----------------~  399 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN-----------------A  399 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-----------------T
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-----------------C
Confidence            999999997554322    2245678899999999999998766 54 8999999644 432                 2


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      ....|+.+|...+.+.+.+. ..|+++++++||.+.+.+
T Consensus       400 g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tg  437 (511)
T 2z5l_A          400 GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGG  437 (511)
T ss_dssp             TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCc
Confidence            34689999999999998764 469999999999885444

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.69  E-value=1.8e-16  Score=145.25  Aligned_cols=164  Identities=14%  Similarity=0.030  Sum_probs=113.8

Q ss_pred             CCCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCCC----------CCccccccccCCC---ceEEEe-------
Q 019794          113 GRRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFFT----------GRKDNLVHHFRNP---RFELIR-------  170 (335)
Q Consensus       113 ~~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~~----------~~~~~~~~~~~~~---~~~~~~-------  170 (335)
                      .+++|+++||||  +|+||++++++|+++|++|++++|+..          ...+.........   ...++.       
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            357889999999  899999999999999999999986420          0001111100000   012222       


Q ss_pred             -----ccccc-------------h-------hccCCCEEEEccCCCC--CCC----ccCChhhHHhhHHHHHHHHHHHHH
Q 019794          171 -----HDVVE-------------P-------ILLEVDQIYHLACPAS--PVH----YKYNPVKTIKTNVMGTLNMLGLAK  219 (335)
Q Consensus       171 -----~D~~~-------------~-------~~~~vD~Vih~A~~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~~a~  219 (335)
                           +|+.+             .       .+.++|+||||||...  ...    ..+++...+++|+.|+.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                 22222             1       2347999999998642  111    123567899999999999999986


Q ss_pred             Hc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeC
Q 019794          220 RV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYG  291 (335)
Q Consensus       220 ~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~G  291 (335)
                      ..   +.+||++||...+.                +.... ..|+.+|.+.+.+++.++.+    .|+++++|+||.|..
T Consensus       166 ~~m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  229 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAER----------------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS  229 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTS----------------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCC
T ss_pred             HHHhcCCEEEEEecccccc----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccc
Confidence            54   34899999976542                11222 36999999999999998876    489999999999876


Q ss_pred             C
Q 019794          292 P  292 (335)
Q Consensus       292 p  292 (335)
                      +
T Consensus       230 ~  230 (315)
T 2o2s_A          230 R  230 (315)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.69  E-value=4.3e-16  Score=150.66  Aligned_cols=162  Identities=15%  Similarity=0.182  Sum_probs=122.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc--ccccccc--CCCceEEEeccccchh-----c------c
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEPI-----L------L  179 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~-----~------~  179 (335)
                      ++++|||||+|+||.++++.|+++|+ +|++++|+.....  ..+...+  ...++.++.+|+.|+.     +      .
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            48999999999999999999999998 7888888643221  1111111  2357889999998751     1      3


Q ss_pred             CCCEEEEccCCC-CCCCc----cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          180 EVDQIYHLACPA-SPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       180 ~vD~Vih~A~~~-~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      .+|+||||||.. .....    .+.+...+++|+.|+.++.+++...+. +||++||...+                ...
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~----------------~g~  382 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAV----------------WGS  382 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHH----------------TTC
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhc----------------CCC
Confidence            589999999975 22221    224678999999999999999988775 89999996544                122


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      .....|+.+|...+.+.+.+. ..|+++++|.||.+.+.++
T Consensus       383 ~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          383 GGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCcc
Confidence            334689999999999988765 4699999999999987765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.68  E-value=1.4e-16  Score=146.14  Aligned_cols=165  Identities=13%  Similarity=0.001  Sum_probs=101.3

Q ss_pred             CCCCCeEEEEcC--CchhHHHHHHHHHhCCCeEEEEecCC-----------CCCcc----------ccccccCCC-----
Q 019794          113 GRRRLRIVVTGG--AGFVGSHLVDKLIDRGDEVIVIDNFF-----------TGRKD----------NLVHHFRNP-----  164 (335)
Q Consensus       113 ~~~~~~vlVTGa--tG~IG~~l~~~Ll~~g~~V~~~~r~~-----------~~~~~----------~~~~~~~~~-----  164 (335)
                      .+++|+++||||  +|+||++++++|+++|++|++++|++           ....+          .....+...     
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            356789999999  89999999999999999999998642           10000          000010000     


Q ss_pred             ceEEEecc------------ccc-------------h-------hccCCCEEEEccCCCC--CCC----ccCChhhHHhh
Q 019794          165 RFELIRHD------------VVE-------------P-------ILLEVDQIYHLACPAS--PVH----YKYNPVKTIKT  206 (335)
Q Consensus       165 ~~~~~~~D------------~~~-------------~-------~~~~vD~Vih~A~~~~--~~~----~~~~~~~~~~~  206 (335)
                      ...++..|            +.+             .       .+..+|+||||||...  ...    ..+++...+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            01233222            222             1       1347999999998642  111    22356789999


Q ss_pred             HHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhh----hC
Q 019794          207 NVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRG----AG  278 (335)
Q Consensus       207 Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~l~~~~a~~----~~  278 (335)
                      |+.|+.++++++...   +.+||++||...+.                +.... ..|+.+|++.+.+++.++.+    .|
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~l~~~la~el~~~~g  229 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEK----------------VIPGYGGGMSSAKAALESDCRTLAFEAGRARA  229 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEecccccc----------------ccCccchhhHHHHHHHHHHHHHHHHHhccccC
Confidence            999999999998764   34899999976542                22222 46999999999999998876    48


Q ss_pred             CcEEEEEeCceeCCC
Q 019794          279 VEVRIARIFNTYGPR  293 (335)
Q Consensus       279 i~~~ivRp~~v~Gp~  293 (335)
                      +++++|+||.|..+.
T Consensus       230 Irvn~v~PG~v~T~~  244 (319)
T 2ptg_A          230 VRVNCISAGPLKSRA  244 (319)
T ss_dssp             CEEEEEEECCCC---
T ss_pred             eeEEEEeeCCccChh
Confidence            999999999997753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.68  E-value=1.3e-16  Score=158.63  Aligned_cols=162  Identities=17%  Similarity=0.046  Sum_probs=108.3

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC--------CCccccccccC--CCceEEEeccccch--
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT--------GRKDNLVHHFR--NPRFELIRHDVVEP--  176 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~--------~~~~~~~~~~~--~~~~~~~~~D~~~~--  176 (335)
                      .....+++|+++||||+|+||++++++|+++|++|++++|...        ...+.....+.  ...+   .+|+.+.  
T Consensus        12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~   88 (613)
T 3oml_A           12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVID   88 (613)
T ss_dssp             ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGG
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHH
Confidence            3456788999999999999999999999999999999987211        01111111111  1111   1344332  


Q ss_pred             ----------hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHH----HHcCC-eEEEEecccccCCC
Q 019794          177 ----------ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLA----KRVGA-KFLLTSTSEVYGDP  237 (335)
Q Consensus       177 ----------~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~-r~v~iSS~~v~~~~  237 (335)
                                .+..+|+||||||.......    .+++...+++|+.|+.++++++    ++.+. +||++||...+.  
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~--  166 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY--  166 (613)
T ss_dssp             HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH--
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC--
Confidence                      23469999999997654332    2357889999999999999987    33443 899999965541  


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                                    +......|+.+|++.+.+++.++.+.   |++++++.||.+
T Consensus       167 --------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          167 --------------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             --------------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence                          22334679999999999999999874   899999999864

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.66  E-value=1.8e-15  Score=139.40  Aligned_cols=161  Identities=8%  Similarity=-0.001  Sum_probs=115.5

Q ss_pred             CCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCC---------CCCc---ccccc-ccCCCceEEEeccccch----
Q 019794          116 RLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFF---------TGRK---DNLVH-HFRNPRFELIRHDVVEP----  176 (335)
Q Consensus       116 ~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~---------~~~~---~~~~~-~~~~~~~~~~~~D~~~~----  176 (335)
                      +|+++||||++  +||.+++++|+++|++|++.++.+         ....   ..... ......+.++.+|+.+.    
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            67999999875  999999999999999999777543         1111   11110 11123356666666433    


Q ss_pred             ----------------------------hccCCCEEEEccCCCC--CCC----ccCChhhHHhhHHHHHHHHHHHHHHc-
Q 019794          177 ----------------------------ILLEVDQIYHLACPAS--PVH----YKYNPVKTIKTNVMGTLNMLGLAKRV-  221 (335)
Q Consensus       177 ----------------------------~~~~vD~Vih~A~~~~--~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~-  221 (335)
                                                  .+..+|++|||||...  ...    ..+++...+++|+.|+..+++++... 
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                                        1246999999999632  111    12357789999999999999998654 


Q ss_pred             --CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeCC
Q 019794          222 --GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS-CYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       222 --~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~Gp  292 (335)
                        +.++|++||...+.                +..... .|+.+|++.+.+.+.++.+    .|++++.+.||.|..+
T Consensus       162 ~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          162 KPQSSIISLTYHASQK----------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             hhCCeEEEEeCccccC----------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence              24899999976542                223333 7999999999999998865    4899999999998754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.65  E-value=2e-15  Score=147.35  Aligned_cols=162  Identities=12%  Similarity=0.114  Sum_probs=118.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEE-ecCCCC------------Ccccccccc--CCCceEEEeccccchh
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVI-DNFFTG------------RKDNLVHHF--RNPRFELIRHDVVEPI  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~-~r~~~~------------~~~~~~~~~--~~~~~~~~~~D~~~~~  177 (335)
                      ..++++|||||+|+||.++++.|+++|++ |+++ +|+...            ..+.+...+  ...++.++.+|+.|..
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46789999999999999999999999997 5555 676422            111111111  1346889999998751


Q ss_pred             -----------ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcC-----C-eEEEEecccccCC
Q 019794          178 -----------LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVG-----A-KFLLTSTSEVYGD  236 (335)
Q Consensus       178 -----------~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~-----~-r~v~iSS~~v~~~  236 (335)
                                 +..+|+||||||.......    .+++...+++|+.|+.++.+++....     . +||++||...+  
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~--  406 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI--  406 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT--
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc--
Confidence                       2458999999997654332    22467789999999999999987754     4 89999997654  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                                    ........|+.+|...+.+.+.+. ..|+++++|.||.+ +.+
T Consensus       407 --------------~g~~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tg  447 (525)
T 3qp9_A          407 --------------WGGAGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGS  447 (525)
T ss_dssp             --------------TCCTTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTS
T ss_pred             --------------CCCCCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-ccc
Confidence                          122334689999999998876653 35999999999998 443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.61  E-value=4.5e-15  Score=147.17  Aligned_cols=157  Identities=15%  Similarity=0.108  Sum_probs=117.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccc-cch---------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDV-VEP---------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~-~~~---------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.++..  . +.....+  ....+..+.+|+ .+.         .+..
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~-~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--A-TKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--C-HHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--H-HHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999987631  1 1111111  123456677787 332         2467


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||......+    .++|+..+++|+.|+.++.+++..    .+ .+||++||...+                .
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~----------------~  459 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI----------------Y  459 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH----------------S
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc----------------c
Confidence            9999999997543322    235788999999999999888643    33 489999996553                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCc
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFN  288 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~  288 (335)
                      +......|+.||++...+.+.++.+   +|++++.|.||.
T Consensus       460 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          460 GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence            2223467999999999999999987   489999999983

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.60  E-value=1.2e-14  Score=135.36  Aligned_cols=165  Identities=12%  Similarity=0.026  Sum_probs=119.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCccc-----------cccc--cCCCceEEEeccccch---
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDN-----------LVHH--FRNPRFELIRHDVVEP---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~-----------~~~~--~~~~~~~~~~~D~~~~---  176 (335)
                      ..+|++|||||+++||.++++.|++ .|++|++++++.......           ....  .....+..+.+|++++   
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4578999999999999999999999 999999998865543211           1111  1234677889999875   


Q ss_pred             ---------hccCCCEEEEccCCC---------------CCC-----------------------CccCChhhHHhhHHH
Q 019794          177 ---------ILLEVDQIYHLACPA---------------SPV-----------------------HYKYNPVKTIKTNVM  209 (335)
Q Consensus       177 ---------~~~~vD~Vih~A~~~---------------~~~-----------------------~~~~~~~~~~~~Nv~  209 (335)
                               .+..+|++|||||..               .+.                       ...++|...+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence                     346799999999863               111                       122356778889988


Q ss_pred             HHH-HHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---h-CC
Q 019794          210 GTL-NMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---A-GV  279 (335)
Q Consensus       210 gt~-~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~-~i  279 (335)
                      +.. .+++++...     +.++|++||....-.              .+......|+.+|...+.+.+.++.+   . |+
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~--------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GI  270 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT--------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGG  270 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCe
Confidence            876 566655432     348999999754310              12112268999999999999999987   4 89


Q ss_pred             cEEEEEeCceeCC
Q 019794          280 EVRIARIFNTYGP  292 (335)
Q Consensus       280 ~~~ivRp~~v~Gp  292 (335)
                      +++++.||.|-.+
T Consensus       271 RVNaVaPG~i~T~  283 (405)
T 3zu3_A          271 DARVSVLKAVVSQ  283 (405)
T ss_dssp             EEEEEECCCCCCH
T ss_pred             EEEEEEeCCCcCc
Confidence            9999999998765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.59  E-value=7.5e-15  Score=137.84  Aligned_cols=166  Identities=13%  Similarity=0.009  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCccc-----------cccc--cCCCceEEEeccccch---
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDN-----------LVHH--FRNPRFELIRHDVVEP---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~-----------~~~~--~~~~~~~~~~~D~~~~---  176 (335)
                      ..+|++|||||+++||.++++.|++ .|++|++++|+.......           ....  .....+..+.+|++++   
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3478999999999999999999999 999999999876543321           1011  1234677889999875   


Q ss_pred             ---------hc-cCCCEEEEccCCC-------------C--CC-----------------------CccCChhhHHhhHH
Q 019794          177 ---------IL-LEVDQIYHLACPA-------------S--PV-----------------------HYKYNPVKTIKTNV  208 (335)
Q Consensus       177 ---------~~-~~vD~Vih~A~~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (335)
                               .+ ..+|++|||||..             .  +.                       ...+++...+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence                     35 7799999999862             1  11                       11224566777777


Q ss_pred             HHHH-HHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CC
Q 019794          209 MGTL-NMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GV  279 (335)
Q Consensus       209 ~gt~-~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i  279 (335)
                      .+.. .+++++...     +.++|++||....-.              .|......|+.+|.+.+.+.+.++.+.   |+
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~--------------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GI  284 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEIT--------------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGG  284 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG--------------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCccCE
Confidence            7765 666665432     347999999754310              111112579999999999999999874   89


Q ss_pred             cEEEEEeCceeCCC
Q 019794          280 EVRIARIFNTYGPR  293 (335)
Q Consensus       280 ~~~ivRp~~v~Gp~  293 (335)
                      +++++.||.|-.+.
T Consensus       285 RVNaVaPG~i~T~~  298 (422)
T 3s8m_A          285 GANVAVLKSVVTQA  298 (422)
T ss_dssp             EEEEEEECCCCCTT
T ss_pred             EEEEEEcCCCcChh
Confidence            99999999997764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.58  E-value=8.8e-15  Score=145.11  Aligned_cols=159  Identities=13%  Similarity=0.059  Sum_probs=111.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC--------CCccccccccC--CCceEEEeccccc-------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT--------GRKDNLVHHFR--NPRFELIRHDVVE-------  175 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~--------~~~~~~~~~~~--~~~~~~~~~D~~~-------  175 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|...        ...+.....+.  .........|+.+       
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET   84 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence            467889999999999999999999999999999987541        11111111111  1122222222221       


Q ss_pred             --hhccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCC
Q 019794          176 --PILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       176 --~~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E  244 (335)
                        +.+..+|++|||||......+    .++|+..+++|+.|+..+++++.    +.+ .+||++||....-         
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~---------  155 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY---------  155 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC---------
Confidence              134679999999997543322    23578899999999999988764    334 4999999965431         


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~  287 (335)
                             +......|+.+|.+...+.+.++.+   +||+++.|.|+
T Consensus       156 -------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          156 -------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                   1223467999999999999999987   48999999997

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.52  E-value=9.9e-14  Score=149.22  Aligned_cols=162  Identities=18%  Similarity=0.172  Sum_probs=119.6

Q ss_pred             CCCCCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEe-cCCCCCcc---ccccccC--CCceEEEeccccch--------
Q 019794          112 IGRRRLRIVVTGGAGF-VGSHLVDKLIDRGDEVIVID-NFFTGRKD---NLVHHFR--NPRFELIRHDVVEP--------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~-IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~---~~~~~~~--~~~~~~~~~D~~~~--------  176 (335)
                      +.+++|+++||||+|+ ||.++++.|++.|++|++++ |+.....+   .+.....  ...+.++.+|+.+.        
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3467899999999998 99999999999999999985 44322211   1111111  34678899999775        


Q ss_pred             ----h-----cc-CCCEEEEccCCCCCC-Cc------cCChhhHHhhHHHHHHHHHHHHHHc------C-CeEEEEeccc
Q 019794          177 ----I-----LL-EVDQIYHLACPASPV-HY------KYNPVKTIKTNVMGTLNMLGLAKRV------G-AKFLLTSTSE  232 (335)
Q Consensus       177 ----~-----~~-~vD~Vih~A~~~~~~-~~------~~~~~~~~~~Nv~gt~~ll~~a~~~------~-~r~v~iSS~~  232 (335)
                          .     +. .+|+||||||..... ..      .+.+...+++|+.++.+++++++..      + .+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                1     22 699999999975443 22      2346789999999999999987432      1 3799999975


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH-HHHHHhhhC--CcEEEEEeCceeC
Q 019794          233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL-TMDYHRGAG--VEVRIARIFNTYG  291 (335)
Q Consensus       233 v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l-~~~~a~~~~--i~~~ivRp~~v~G  291 (335)
                      .+.                +  ....|+.+|++.+.+ .+.++.+.+  ++++.+.||.|.|
T Consensus       831 g~~----------------g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t  874 (1887)
T 2uv8_A          831 GTF----------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  874 (1887)
T ss_dssp             TCS----------------S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred             hcc----------------C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence            431                1  235799999999998 777766543  9999999999985

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.51  E-value=2.3e-13  Score=128.47  Aligned_cols=165  Identities=8%  Similarity=-0.092  Sum_probs=116.3

Q ss_pred             CCCCeEEEEcCCchhHHH--HHHHHHhCCCeEEEEecCCCCCcc-----------ccccc--cCCCceEEEeccccch--
Q 019794          114 RRRLRIVVTGGAGFVGSH--LVDKLIDRGDEVIVIDNFFTGRKD-----------NLVHH--FRNPRFELIRHDVVEP--  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~--l~~~Ll~~g~~V~~~~r~~~~~~~-----------~~~~~--~~~~~~~~~~~D~~~~--  176 (335)
                      ..+|+++||||+++||.+  ++..|++.|++|++++|+......           .+...  .....+..+.+|+.++  
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            467899999999999999  999999999999999997544321           11111  1234678899999875  


Q ss_pred             ----------hccCCCEEEEccCCC-------------C--CC-----------------------CccCChhhHHhhHH
Q 019794          177 ----------ILLEVDQIYHLACPA-------------S--PV-----------------------HYKYNPVKTIKTNV  208 (335)
Q Consensus       177 ----------~~~~vD~Vih~A~~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (335)
                                .+..+|++|||||..             .  +.                       ...+++...+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence                      235699999999863             1  11                       01223556677776


Q ss_pred             HHHH-HHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh----hC
Q 019794          209 MGTL-NMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG----AG  278 (335)
Q Consensus       209 ~gt~-~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~----~~  278 (335)
                      .+.. .+++++...     +.++|++||....-.              .|......|+.+|.+.+.+.+.++.+    .|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~--------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~G  283 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT--------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIG  283 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC--------------CCccccHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            6655 556655443     247999998654210              12222278999999999999999876    58


Q ss_pred             CcEEEEEeCceeCC
Q 019794          279 VEVRIARIFNTYGP  292 (335)
Q Consensus       279 i~~~ivRp~~v~Gp  292 (335)
                      ++++++.||.|-.+
T Consensus       284 IrVN~V~PG~v~T~  297 (418)
T 4eue_A          284 GRAFVSVNKALVTK  297 (418)
T ss_dssp             CEEEEEECCCCCCH
T ss_pred             eEEEEEECCcCcCh
Confidence            99999999998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.50  E-value=3.1e-14  Score=148.82  Aligned_cols=162  Identities=18%  Similarity=0.153  Sum_probs=117.3

Q ss_pred             CCCCCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEe-cCCCCCccccc---cccC--CCceEEEeccccch--------
Q 019794          112 IGRRRLRIVVTGGAGF-VGSHLVDKLIDRGDEVIVID-NFFTGRKDNLV---HHFR--NPRFELIRHDVVEP--------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~-IG~~l~~~Ll~~g~~V~~~~-r~~~~~~~~~~---~~~~--~~~~~~~~~D~~~~--------  176 (335)
                      +.+++|+++||||+|+ ||.+++++|++.|++|++++ |+.....+...   ....  ..++.++.+|+.+.        
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            3467899999999998 99999999999999999984 54433222111   1111  24678899999775        


Q ss_pred             ----h-----cc-CCCEEEEccCCCCCC-Cc------cCChhhHHhhHHHHHHHHHHHHHH--c----C-CeEEEEeccc
Q 019794          177 ----I-----LL-EVDQIYHLACPASPV-HY------KYNPVKTIKTNVMGTLNMLGLAKR--V----G-AKFLLTSTSE  232 (335)
Q Consensus       177 ----~-----~~-~vD~Vih~A~~~~~~-~~------~~~~~~~~~~Nv~gt~~ll~~a~~--~----~-~r~v~iSS~~  232 (335)
                          .     +. .+|+||||||..... ..      .+.+...+++|+.++.+++++++.  .    + .+||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                1     23 699999999975443 22      234678999999999999998732  2    1 3799999965


Q ss_pred             ccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH-HHHHHhhhC--CcEEEEEeCceeC
Q 019794          233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL-TMDYHRGAG--VEVRIARIFNTYG  291 (335)
Q Consensus       233 v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l-~~~~a~~~~--i~~~ivRp~~v~G  291 (335)
                      ...                +  ....|+.+|++.+.+ .+.++.+.+  ++++.|.||.|.|
T Consensus       632 G~~----------------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          632 GTF----------------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             TTS----------------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             hcc----------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            431                1  235799999999998 555554433  8999999999985

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.47  E-value=1.8e-13  Score=139.70  Aligned_cols=162  Identities=18%  Similarity=0.194  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHH-hCCC-eEEEEecCCCCCc--ccccccc--CCCceEEEeccccchh-----c----
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLI-DRGD-EVIVIDNFFTGRK--DNLVHHF--RNPRFELIRHDVVEPI-----L----  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll-~~g~-~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~-----~----  178 (335)
                      ..+++++||||+|+||.++++.|+ ++|+ +|++++|+.....  +.....+  ...++.++.+|+.++.     +    
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            467899999999999999999999 7998 5899998743221  1111111  2356889999998751     1    


Q ss_pred             --cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          179 --LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       179 --~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                        ..+|+||||||.......    .+++...+++|+.|+.++.+++... -+||++||...+-                .
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~-l~iV~~SS~ag~~----------------g  670 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD-VALVLFSSVSGVL----------------G  670 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT-SEEEEEEETHHHH----------------T
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEccHHhcC----------------C
Confidence              158999999997654332    2357889999999999999987332 2899999965541                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~  293 (335)
                      ......|+.+|...+.+.++++. .|++++.|.||.+-.++
T Consensus       671 ~~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          671 SGGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcch
Confidence            23346899999988888877654 59999999999887654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.46  E-value=3.8e-13  Score=144.47  Aligned_cols=161  Identities=17%  Similarity=0.116  Sum_probs=116.6

Q ss_pred             CCCCCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEecC-CCCCcc---ccccccC--CCceEEEeccccch--------
Q 019794          112 IGRRRLRIVVTGGAGF-VGSHLVDKLIDRGDEVIVIDNF-FTGRKD---NLVHHFR--NPRFELIRHDVVEP--------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~-IG~~l~~~Ll~~g~~V~~~~r~-~~~~~~---~~~~~~~--~~~~~~~~~D~~~~--------  176 (335)
                      +.+++|++|||||+|+ ||.++++.|++.|++|+++++. .....+   .+...+.  ...+.++.+|+.+.        
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3467899999999999 9999999999999999998643 222111   1111111  34678899999775        


Q ss_pred             ----h---cc-CCCEEEEccCCCCCC-Cc------cCChhhHHhhHHHHHHHHHHHHH--Hc----C-CeEEEEeccccc
Q 019794          177 ----I---LL-EVDQIYHLACPASPV-HY------KYNPVKTIKTNVMGTLNMLGLAK--RV----G-AKFLLTSTSEVY  234 (335)
Q Consensus       177 ----~---~~-~vD~Vih~A~~~~~~-~~------~~~~~~~~~~Nv~gt~~ll~~a~--~~----~-~r~v~iSS~~v~  234 (335)
                          .   +. .+|+||||||..... ..      .+.+...+++|+.|+.+++++++  ..    + .+||++||...+
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                1   33 699999999975443 21      23467899999999999987742  21    2 379999996543


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh-h--CCcEEEEEeCcee
Q 019794          235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG-A--GVEVRIARIFNTY  290 (335)
Q Consensus       235 ~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-~--~i~~~ivRp~~v~  290 (335)
                      .                +  ....|+.+|++.+.+++.+..+ .  .++++.|.||.+.
T Consensus       808 ~----------------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~  848 (1878)
T 2uv9_A          808 F----------------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR  848 (1878)
T ss_dssp             S----------------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred             c----------------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence            1                1  1357999999999998765543 2  3999999999998

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.21  E-value=6e-11  Score=133.51  Aligned_cols=162  Identities=15%  Similarity=0.086  Sum_probs=113.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCe-EEEEecCCCCCcc--cccccc--CCCceEEEeccccch-----------h
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDE-VIVIDNFFTGRKD--NLVHHF--RNPRFELIRHDVVEP-----------I  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~-V~~~~r~~~~~~~--~~~~~~--~~~~~~~~~~D~~~~-----------~  177 (335)
                      ..+|+++||||+|+||.++++.|+++|++ |++++|+......  .....+  ...++.++.+|+.+.           .
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            46789999999999999999999999996 7778887543321  111111  234677888999775           1


Q ss_pred             ccCCCEEEEccCCCCCCC----ccCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          178 LLEVDQIYHLACPASPVH----YKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +..+|+||||||......    ..+++...+++|+.|+.++.+++...-   .+||++||....-               
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~--------------- 2026 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR--------------- 2026 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT---------------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC---------------
Confidence            346999999999654322    234678899999999999988876542   3899999965541               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                       .......|+.+|...+.+++.... .|++...+..|.+-+.
T Consensus      2027 -g~~g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         2027 -GNAGQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTT
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCc
Confidence             222346799999999999987654 4899999888766443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.15  E-value=2.8e-10  Score=128.35  Aligned_cols=164  Identities=16%  Similarity=0.130  Sum_probs=112.6

Q ss_pred             CCCCCeEEEEcCCch-hHHHHHHHHHhCCCeEEEEecCCCCC----ccccccccC--CCceEEEeccccch---------
Q 019794          113 GRRRLRIVVTGGAGF-VGSHLVDKLIDRGDEVIVIDNFFTGR----KDNLVHHFR--NPRFELIRHDVVEP---------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~-IG~~l~~~Ll~~g~~V~~~~r~~~~~----~~~~~~~~~--~~~~~~~~~D~~~~---------  176 (335)
                      .+++|+++||||+++ ||.++++.|++.|++|++++|+....    .+.+...+.  ...+..+.+|+.++         
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999999875541    111111111  23577888998764         


Q ss_pred             -------hccCCCEEEEccCC----CCC-----CCccCChh----hHHhhHHHHHHHHHHHHHHc----CC--e--EEEE
Q 019794          177 -------ILLEVDQIYHLACP----ASP-----VHYKYNPV----KTIKTNVMGTLNMLGLAKRV----GA--K--FLLT  228 (335)
Q Consensus       177 -------~~~~vD~Vih~A~~----~~~-----~~~~~~~~----~~~~~Nv~gt~~ll~~a~~~----~~--r--~v~i  228 (335)
                             .+..+|++|||||.    ...     ....+++.    ..+++|+.++..+++.+...    +.  +  +|..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                   23469999999996    111     00122343    34899999999888876542    21  2  2222


Q ss_pred             ecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh--h--CCcEEEEEeCceeCCC
Q 019794          229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG--A--GVEVRIARIFNTYGPR  293 (335)
Q Consensus       229 SS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~--~--~i~~~ivRp~~v~Gp~  293 (335)
                      .|. ..+                .......|+.||.+.+.+++.++.+  .  +++++.+.||.|-+..
T Consensus      2293 ~ss-~~g----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~ 2344 (3089)
T 3zen_D         2293 GSP-NRG----------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTG 2344 (3089)
T ss_dssp             ECS-STT----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECST
T ss_pred             CCc-ccc----------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCc
Confidence            221 111                1112347999999999999999988  3  6899999999998543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.13  E-value=9.3e-11  Score=107.77  Aligned_cols=165  Identities=10%  Similarity=0.042  Sum_probs=106.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecC----CCCCcc---ccccccCCCceEEEeccccchhccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNF----FTGRKD---NLVHHFRNPRFELIRHDVVEPILLEV  181 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~----~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~v  181 (335)
                      .+||+||||+||||++++..|+..|.       +|++++++    ......   .+.+.......++...+...+++.++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA   84 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence            46999999999999999999999885       78888775    211111   11111001112232223345678999


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C--eEEEEec-ccc--cCCCCCCCCCCCcCCCCCCCCC
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A--KFLLTST-SEV--YGDPLEHPQKETYWGNVNPIGE  255 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~--r~v~iSS-~~v--~~~~~~~~~~E~~~~~~~~~~~  255 (335)
                      |+|||+||...  ....+....+..|+.++.++++++.+.+ .  ++|++|. ..+  |-..      +.    ...+++
T Consensus        85 D~Vi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~------~~----~~~~p~  152 (329)
T 1b8p_A           85 DVALLVGARPR--GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAM------KS----APSLPA  152 (329)
T ss_dssp             SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH------HT----CTTSCG
T ss_pred             CEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHH------HH----cCCCCH
Confidence            99999998532  2233556788999999999999999884 3  7888875 211  1000      00    001122


Q ss_pred             CChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       256 ~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      ...|+.++....++...+++..|++...++...|+|.
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence            2346667777777777788888888777776677884

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.95  E-value=2e-09  Score=98.69  Aligned_cols=112  Identities=13%  Similarity=0.016  Sum_probs=77.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccc---cccccCCCceEEEec-cccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDN---LVHHFRNPRFELIRH-DVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~-D~~~~~~~~vD~Vih~A  188 (335)
                      ++|+|+||||+|+||..++..|+..|  .+|+++++++.  ...   +.+......+..+.. +...+++.++|+|||+|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence            34699999999999999999999998  68999987653  111   111111112222222 12345789999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      |....  ........+..|+.++.++++++.+.+. .+|+++|
T Consensus        85 g~~~~--~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           85 GVPRK--PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCCC--SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            85322  2233456789999999999999999886 5777776

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.90  E-value=3.9e-09  Score=96.22  Aligned_cols=165  Identities=12%  Similarity=0.062  Sum_probs=97.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEec--CCCCCcc---ccccc--cCCCceEEEecc-ccchhccCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDN--FFTGRKD---NLVHH--FRNPRFELIRHD-VVEPILLEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r--~~~~~~~---~~~~~--~~~~~~~~~~~D-~~~~~~~~vD~Vih  186 (335)
                      |||+||||+|+||+.++..|+..|.  ++.++++  +......   .+.+.  +....+++...+ ...+++.++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            5899999999999999999998885  6777876  3221110   11111  111234444433 24667899999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHH-HHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE-GKRT  265 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~-sK~~  265 (335)
                      +||...  .........+..|+.++.++++++++.+..+|+++|.-+...      .+..|.. ..+++...+|. +..-
T Consensus        81 ~Ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~------t~~~~k~-~~~p~~rviG~gt~LD  151 (313)
T 1hye_A           81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVM------TYKALVD-SKFERNQVFGLGTHLD  151 (313)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHH------HHHHHHH-HCCCTTSEEECTTHHH
T ss_pred             CCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHH------HHHHHHh-hCcChhcEEEeCccHH
Confidence            998532  222345678999999999999999988744666666322100      0000000 11222234444 4444


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYG  291 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~G  291 (335)
                      ..++...+++..|++..-++. .++|
T Consensus       152 ~~r~~~~la~~lgv~~~~v~~-~v~G  176 (313)
T 1hye_A          152 SLRFKVAIAKFFGVHIDEVRT-RIIG  176 (313)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEC-CEEE
T ss_pred             HHHHHHHHHHHhCcCHHHeEE-EEee
Confidence            555555555556665544543 4454

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.90  E-value=3e-09  Score=81.96  Aligned_cols=92  Identities=21%  Similarity=0.132  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      ++++|+|+|+ |++|+.+++.|++.| ++|++++|+.......     ....+..+..|+.+.     .+.++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVL-----NRMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH-----HTTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH-----HhCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4579999999 999999999999999 8999999864322211     123566777777653     467899999998


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      +..                  .+.+++++|.+.+++++.+++
T Consensus        78 ~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            421                  135788999999987666554

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.87  E-value=5.9e-09  Score=94.59  Aligned_cols=111  Identities=14%  Similarity=0.053  Sum_probs=77.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEec--CCCCCcc---cccccc-CCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDN--FFTGRKD---NLVHHF-RNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r--~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||+||||+|++|+.++..|+..+.  ++.++++  +......   .+.+.. ....+.+...|  .+++.++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~--~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC--HHHhCCCCEEEEcC
Confidence            5899999999999999999998876  6888877  4321111   111110 01233444333  56789999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecc
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS  231 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~  231 (335)
                      +...  .........+..|+.++.++++++++.+. .+|+++|.
T Consensus        79 g~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             CCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            8532  22234456789999999999999999876 67777663

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.66  E-value=1.3e-07  Score=87.28  Aligned_cols=165  Identities=10%  Similarity=-0.005  Sum_probs=102.0

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHH-hCCCeEEEEecCCCCCcccc-----------cc--ccCCCceEEEeccccch---
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNL-----------VH--HFRNPRFELIRHDVVEP---  176 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll-~~g~~V~~~~r~~~~~~~~~-----------~~--~~~~~~~~~~~~D~~~~---  176 (335)
                      ..+|++|||||+.+||.+++..|+ +.|..|+++.+.........           .+  .........+.+|+.++   
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457899999999999999999998 67999999888654433211           00  11234678899999775   


Q ss_pred             ---------hccCCCEEEEccCCCCCCCcc------------------------CC-h-----hhHHhhHHHHHHHH---
Q 019794          177 ---------ILLEVDQIYHLACPASPVHYK------------------------YN-P-----VKTIKTNVMGTLNM---  214 (335)
Q Consensus       177 ---------~~~~vD~Vih~A~~~~~~~~~------------------------~~-~-----~~~~~~Nv~gt~~l---  214 (335)
                               .+.++|+|||++|........                        .+ +     ...-+-++.+|..+   
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence                     356799999999854211100                        00 0     00112233444433   


Q ss_pred             ------HHHHHHc-----CCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh-CCcEE
Q 019794          215 ------LGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-GVEVR  282 (335)
Q Consensus       215 ------l~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~-~i~~~  282 (335)
                            +.+....     |.+++-+|+...          |..|    |.-....+|..|+..|..++.++.+. ++++.
T Consensus       208 s~~s~w~~al~~a~lla~G~siva~SYiGs----------e~t~----P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~  273 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEGCITLAYSYIGP----------EATQ----ALYRKGTIGKAKEHLEATAHRLNKENPSIRAF  273 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCC----------GGGH----HHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             hHHHHHHHHHHhhhcccCCceEEEEeccCc----------ceee----cCCCccHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence                  2233333     346777776421          1101    11112468999999999999999885 56777


Q ss_pred             EEEeCceeCC
Q 019794          283 IARIFNTYGP  292 (335)
Q Consensus       283 ivRp~~v~Gp  292 (335)
                      ++-++.+.-+
T Consensus       274 v~v~~a~vT~  283 (401)
T 4ggo_A          274 VSVNKGLVTR  283 (401)
T ss_dssp             EEECCCCCCT
T ss_pred             EEEcCccccc
Confidence            7766665543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.55  E-value=3.8e-07  Score=82.98  Aligned_cols=109  Identities=14%  Similarity=0.067  Sum_probs=76.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCcc---ccccccCCCceEEEec-cccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKD---NLVHHFRNPRFELIRH-DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~-D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.|+||+|++|..++..|+..|  .+|+++++++  ...   .+.+.....++....+ +..++++.++|+||++||.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            589999999999999999999888  6899999875  111   1112111112333322 3344578999999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  .........+..|+..+..+++.+.+...  ++|++|
T Consensus        79 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           79 PR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            32  22234456789999999999999888764  666654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.51  E-value=3.9e-08  Score=88.42  Aligned_cols=76  Identities=13%  Similarity=0.203  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC-CceEEEeccccc-----hhccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVE-----PILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~-----~~~~~vD~Vih~  187 (335)
                      .++++++||||+|++|++++..|++.|++|++++|+.....+ +...+.. ..+.++.+|+.+     ..+.++|+|||+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~-l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-AADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            567899999999999999999999999999999986432221 1111100 123455566644     356779999999


Q ss_pred             cCC
Q 019794          188 ACP  190 (335)
Q Consensus       188 A~~  190 (335)
                      ++.
T Consensus       196 ag~  198 (287)
T 1lu9_A          196 GAI  198 (287)
T ss_dssp             CCT
T ss_pred             CCc
Confidence            975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.47  E-value=5.5e-07  Score=77.75  Aligned_cols=71  Identities=18%  Similarity=0.336  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--
Q 019794          115 RRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--  176 (335)
Q Consensus       115 ~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--  176 (335)
                      +||+||||||                +|++|.+++++|+++|++|+++.+.......      ....++.+..+..++  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~~~~~~~~~v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------PHPNLSIREITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------CCTTEEEEECCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------CCCCeEEEEHhHHHHHH
Confidence            4789999999                9999999999999999999999986432110      013466666654332  


Q ss_pred             -----hccCCCEEEEccCCC
Q 019794          177 -----ILLEVDQIYHLACPA  191 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~  191 (335)
                           .+.++|++||+||..
T Consensus        76 ~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           76 IEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHhcCCCCEEEEcCccc
Confidence                 356799999999864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.43  E-value=3.7e-07  Score=83.60  Aligned_cols=112  Identities=15%  Similarity=0.096  Sum_probs=74.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--e-----EEEEecCCC--CCc---cccccccCCCceEEEeccccchhccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--E-----VIVIDNFFT--GRK---DNLVHHFRNPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~-----V~~~~r~~~--~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      ++|+||||+|+||++++..|+..+.  +     ++++++...  ...   .++.+......-.+...+-..+.+.++|+|
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvV   83 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA   83 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCEE
Confidence            5899999999999999999998775  5     888887532  111   111111000111222223334578999999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC---eEEEEec
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA---KFLLTST  230 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~---r~v~iSS  230 (335)
                      |++||..  .....+....++.|+..++++++++++.+.   +++.+|-
T Consensus        84 vitAg~p--rkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           84 ILVGSMP--RRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EECCSCC--CCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEeCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999843  222345667889999999999999998874   4555553

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.37  E-value=1.6e-06  Score=74.68  Aligned_cols=71  Identities=17%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch
Q 019794          113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP  176 (335)
Q Consensus       113 ~~~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~  176 (335)
                      .+++|+||||||                +|.||.+++++|+++|++|+++++.... .  .     ...++.++....++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~-----~~g~~~~dv~~~~~   76 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P--T-----PPFVKRVDVMTALE   76 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C--C-----CTTEEEEECCSHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c--c-----CCCCeEEccCcHHH
Confidence            367899999999                6999999999999999999998875421 1  0     11234433322221


Q ss_pred             -------hccCCCEEEEccCCC
Q 019794          177 -------ILLEVDQIYHLACPA  191 (335)
Q Consensus       177 -------~~~~vD~Vih~A~~~  191 (335)
                             .+.++|++|||||..
T Consensus        77 ~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           77 MEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHHhcCCCCEEEECCccc
Confidence                   356799999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.31  E-value=2e-06  Score=68.15  Aligned_cols=95  Identities=16%  Similarity=0.165  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|++++++...... +    .......+.+|..+.      .+.++|+||+++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~-~----~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-Y----ASYATHAVIANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT-T----TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence            4678999998 999999999999999999999886432211 1    112234566666543      256799999987


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecc
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTS  231 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~  231 (335)
                      +.        +    .+.|.    .++..+++.+. ++|..++.
T Consensus        79 ~~--------~----~~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           79 GA--------N----IQAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             CS--------C----HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             CC--------c----hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            52        1    02232    35666777776 55555544

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.22  E-value=4.9e-06  Score=79.38  Aligned_cols=104  Identities=20%  Similarity=0.194  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~vD~Vih~A~  189 (335)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+...... +...+  ..+..+.+|+.+     +.+.++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~-la~~~--~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKK-LSAGV--QHSTPISLDVNDDAALDAEVAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHH-TTTTC--TTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHH-HHHhc--CCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence            367999998 7999999999999999999999986432221 11111  235667777764     34678999999997


Q ss_pred             CCCCCCccCChhhHHh--hH-------HHHHHHHHHHHHHcCCeE
Q 019794          190 PASPVHYKYNPVKTIK--TN-------VMGTLNMLGLAKRVGAKF  225 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~--~N-------v~gt~~ll~~a~~~~~r~  225 (335)
                      .......   ....++  .|       ...+.+++++|++.|+++
T Consensus        78 ~~~~~~i---~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~  119 (450)
T 1ff9_A           78 YTFHATV---IKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV  119 (450)
T ss_dssp             --CHHHH---HHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEE
T ss_pred             cccchHH---HHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeE
Confidence            5321100   111111  11       245778999999988763

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.16  E-value=8.8e-06  Score=64.59  Aligned_cols=69  Identities=22%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      ++++|+|+|+ |++|+.+++.|.+.|++|++++++++.... +    ....+.++.+|..++.      +.++|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~----~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-L----EDEGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-H----HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-H----HHCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            4578999997 999999999999999999999986442211 1    1124677888887752      35799999866


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      +
T Consensus        79 ~   79 (141)
T 3llv_A           79 S   79 (141)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.15  E-value=4e-06  Score=74.62  Aligned_cols=75  Identities=9%  Similarity=0.160  Sum_probs=43.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCCC-ccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVI-DNFFTGR-KDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++++|.|+|++|.+|+.+++.+.+. +++|+++ ++..... ...+..........+...+..++.+.++|+||+++.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence            3469999999999999999998854 6677744 4433211 111111111111111112233455568999998773

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.12  E-value=1.7e-06  Score=81.51  Aligned_cols=94  Identities=15%  Similarity=0.274  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccC---CCceEEEeccccch-----hccC--CC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFR---NPRFELIRHDVVEP-----ILLE--VD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~-----~~~~--vD  182 (335)
                      |++|+|+|| |+||+.+++.|++.|.   +|++.+|+.+...... ..+.   ..++..+..|+.+.     .+.+  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la-~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA-QSIKAKGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH-HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH-HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            468999998 9999999999999983   8999998754332221 1111   13577788888653     3444  89


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                      +|||++++..                  ...++++|.+.|+.++-++
T Consensus        79 vVin~ag~~~------------------~~~v~~a~l~~g~~vvD~a  107 (405)
T 4ina_A           79 IVLNIALPYQ------------------DLTIMEACLRTGVPYLDTA  107 (405)
T ss_dssp             EEEECSCGGG------------------HHHHHHHHHHHTCCEEESS
T ss_pred             EEEECCCccc------------------ChHHHHHHHHhCCCEEEec
Confidence            9999986310                  1367888888888776543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.08  E-value=4.3e-06  Score=76.70  Aligned_cols=112  Identities=15%  Similarity=0.191  Sum_probs=73.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccc---cccc-cCCCceEEEeccccchhccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDN---LVHH-FRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ..++||.|+|++|+||+.++..|+..|  .+|+++|.+....+..   +.+. +...++.+ ..| ..+++.++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t~d-~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-TSD-IKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-ESC-HHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-cCC-HHHHhCCCCEEEEc
Confidence            456799999999999999999999988  4899998864322211   1111 11122322 122 23468899999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--e-EEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--K-FLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r-~v~iS  229 (335)
                      ||..  ......-...++.|+.....+++.+.+.+.  . ++.+|
T Consensus        84 aG~p--~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           84 GGAP--RKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             cCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            9842  222234566789999999999999988764  3 44554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.06  E-value=1.8e-05  Score=62.26  Aligned_cols=69  Identities=20%  Similarity=0.229  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A~  189 (335)
                      +|+|+|+|+ |++|+.+++.|.+.|++|+++++++.... .+...   ..+..+.+|..+.      .+.++|+||++..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-KASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHHh---cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            468999986 99999999999999999999988643221 11111   1344566665432      2567999999863

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.01  E-value=2.1e-05  Score=71.67  Aligned_cols=110  Identities=19%  Similarity=0.164  Sum_probs=75.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---cccccCC--CceEEEeccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHFRN--PRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~~~--~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ..++|.|+|+ |++|..++..|+..|.  +|++++++.......   +.+....  ..+.+...|  .+++.++|+||.+
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--~~a~~~aDvVvi~   80 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--YEDCKDADIVCIC   80 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--HHHhCCCCEEEEe
Confidence            4579999996 9999999999999886  899998864332211   2211111  233444333  3578999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||..  .....+-...++.|+.....+++.+.+.+.  .++.+|
T Consensus        81 ag~p--~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           81 AGAN--QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             CSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             cccC--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9842  222234566789999999999999988764  455555

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.92  E-value=2.1e-05  Score=75.32  Aligned_cols=75  Identities=20%  Similarity=0.241  Sum_probs=50.9

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhccCCCEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQI  184 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~vD~V  184 (335)
                      ....++++|+|+|+ |++|+.++..|++. |++|++++|+.+.... +...   ..+..+..|+.+     +.+.++|+|
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~-la~~---~~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA-LAKP---SGSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH-HHGG---GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH-HHHh---cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence            34456789999997 99999999999998 6799999986443221 1111   134555666543     345789999


Q ss_pred             EEccCC
Q 019794          185 YHLACP  190 (335)
Q Consensus       185 ih~A~~  190 (335)
                      ||+++.
T Consensus        93 In~tp~   98 (467)
T 2axq_A           93 ISLIPY   98 (467)
T ss_dssp             EECSCG
T ss_pred             EECCch
Confidence            999864

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.92  E-value=5.6e-05  Score=68.42  Aligned_cols=110  Identities=15%  Similarity=0.076  Sum_probs=74.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-C--CeEEEEecCCCCCccccccccCC-CceEEE--eccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-G--DEVIVIDNFFTGRKDNLVHHFRN-PRFELI--RHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.|+||+|.||..++..|... +  .++++++..+ .......+.... ....+.  ..+-..+.+.++|+||-+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence            58999999999999999998775 4  4889998865 222111111111 122222  123345678999999999984


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .  .....+-...++.|..-...+.+.+.+.+.  .++.+|
T Consensus        80 ~--rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           80 A--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             S--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            2  223345677889999999999999988764  555554

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.87  E-value=2.4e-05  Score=72.61  Aligned_cols=90  Identities=13%  Similarity=0.138  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      -+.|||+|.|| |++|+.+++.|.+ .++|.+.+++.+.... +     ...+..+..|+.|.     .+.++|+||+++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~-~-----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK-V-----KEFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH-H-----TTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH-H-----hccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            34568999998 9999999988865 5799998886432221 1     12344556666543     568899999987


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                      ++.              .    ...++++|.+.|+.+|=+|
T Consensus        86 p~~--------------~----~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--------------L----GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--------------G----HHHHHHHHHHHTCEEEECC
T ss_pred             CCc--------------c----cchHHHHHHhcCcceEeee
Confidence            531              0    1368899999998887765

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.84  E-value=3e-05  Score=71.34  Aligned_cols=97  Identities=8%  Similarity=0.115  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-----C-eEEEEecCCCC-C-ccccccccCC-CceEEEeccccchhccCCCEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-----D-EVIVIDNFFTG-R-KDNLVHHFRN-PRFELIRHDVVEPILLEVDQIY  185 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-----~-~V~~~~r~~~~-~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~vD~Vi  185 (335)
                      ++++|+|.||||++|+.|++.|++++     . +|+.+.+.... . .......+.. ..+.+.+.|  .+.+.++|+||
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvVf   85 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAVF   85 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEEE
Confidence            35799999999999999999999987     5 77777543221 1 1111111111 122222222  23456899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      .+.+...                  +..++..+ +.|+++|-+|+..
T Consensus        86 ~alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~  113 (352)
T 2nqt_A           86 LALPHGH------------------SAVLAQQL-SPETLIIDCGADF  113 (352)
T ss_dssp             ECCTTSC------------------CHHHHHHS-CTTSEEEECSSTT
T ss_pred             ECCCCcc------------------hHHHHHHH-hCCCEEEEECCCc
Confidence            9876321                  23566777 7788999999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.82  E-value=0.00036  Score=56.14  Aligned_cols=71  Identities=20%  Similarity=0.194  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~  187 (335)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|+++++++..... +..   ......+.+|..+.      .+.++|+||.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~-~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR-LNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG-SCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            44679999995 999999999999999999999987543322 110   22345566665432      25679999987


Q ss_pred             cC
Q 019794          188 AC  189 (335)
Q Consensus       188 A~  189 (335)
                      .+
T Consensus        92 ~~   93 (155)
T 2g1u_A           92 TN   93 (155)
T ss_dssp             SS
T ss_pred             eC
Confidence            64

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.80  E-value=2e-05  Score=71.79  Aligned_cols=111  Identities=15%  Similarity=0.205  Sum_probs=65.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcc---ccccccC-CCceEEEeccccchhccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKD---NLVHHFR-NPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ..+++|.|+|+ |.||+.++..|+..|.  +|++++++......   .+.+... ...+.+...|  .+++.++|+||.+
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--~~a~~~aDiVvi~   83 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--YSDAKDADLVVIT   83 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--HHHhcCCCEEEEC
Confidence            45679999996 9999999999999887  89999886432221   1111111 0233444332  4578999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||...  .....-...++.|+.-...+++.+.+.+.  .++.+|
T Consensus        84 ag~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           84 AGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CCCCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            98422  22233456778899999999999888764  455554

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.80  E-value=7.4e-05  Score=67.97  Aligned_cols=110  Identities=12%  Similarity=0.061  Sum_probs=73.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc---ccccc--CCCceEEE-eccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN---LVHHF--RNPRFELI-RHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~-~~D~~~~~~~~vD~Vih~  187 (335)
                      ++++|.|+|+ |.+|..++..|+..|. +|++++++++.....   +.+..  ......+. ..|.  +++.++|+||.+
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--~a~~~aDiVIia   82 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--AAIEGADVVIVT   82 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--GGGTTCSEEEEC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--HHHCCCCEEEEc
Confidence            4679999998 9999999999999998 999999876543211   11110  01122232 2343  678999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||..  ......-...+..|+.-...+++.+.+.+.  .++.+|
T Consensus        83 ag~p--~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           83 AGVP--RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             CSCC--CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCcC--CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            8742  222233456778899999999999888764  555555

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.79  E-value=4.1e-05  Score=68.76  Aligned_cols=108  Identities=17%  Similarity=0.093  Sum_probs=75.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcc---cccccc--CCCceEEEe-ccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKD---NLVHHF--RNPRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~---~~~~~~--~~~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|+|+ |.+|..++..|+..|.  +|.+++++++..+.   .+.+..  -.....+.. .|  .+++.++|+||.+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDiVViaa   77 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--HHHhCCCCEEEECC
Confidence            58999998 9999999999999987  89999987643221   111111  012223332 34  67889999999998


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      |..  .....+-...+..|..-...+++.+.+.+.  .++.+|
T Consensus        78 g~~--~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           78 GLA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             CCC--CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             CCC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            743  222234567789999999999999988764  555555

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.78  E-value=0.00011  Score=66.37  Aligned_cols=110  Identities=15%  Similarity=0.163  Sum_probs=70.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC-----CCceEEEe-ccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      +++|.|+|| |++|..++..|+..|+ +|++++++++..+........     .....+.. .|.  +++.++|+||.++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~a~   78 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--ADTANSDVIVVTS   78 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--HHHCCCCEEEEcC
Confidence            368999998 9999999999999997 888888875433221111111     11222222 443  5689999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      |....  ....-......|+.....+.+.+.+.+. .+|++.|
T Consensus        79 g~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           79 GAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            74321  1122234567888888889988888764 3444444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.78  E-value=0.00018  Score=65.40  Aligned_cols=110  Identities=14%  Similarity=0.080  Sum_probs=75.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC-----CCceEEE-eccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELI-RHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~D~~~~~~~~vD~Vih~  187 (335)
                      ++++|.|+|+ |.+|..++..|+..|. +|+++++++........+...     .....+. ..|  .+++.++|+||.+
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--~~a~~~aDvVIi~   80 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--YKDLENSDVVIVT   80 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--HHHHCCCCEEEEc
Confidence            3579999995 9999999999999887 999999876543211111111     1122232 233  3678999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||..  ......-...+..|+.-...+++.+.+.+.  .++.+|
T Consensus        81 ag~p--~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           81 AGVP--RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCcC--CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            8742  222234566788999999999999888764  555554

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.76  E-value=0.00023  Score=64.67  Aligned_cols=109  Identities=18%  Similarity=0.165  Sum_probs=69.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC----CceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ++++|.|+|+ |++|..++..|+..+.  +|+++|.+.+............    ..+.+.. + ..+++.++|+||.++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~~   82 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-G-DYSDVKDCDVIVVTA   82 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CGGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-C-CHHHhCCCCEEEEcC
Confidence            3468999998 9999999999999987  8999998765433211111110    2333333 2 245789999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEE
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLT  228 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~i  228 (335)
                      +...  .....-......|+.....+++.+.+.+.  .++.+
T Consensus        83 g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           83 GANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            7422  22223456778999999999999887653  44443

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.76  E-value=0.00012  Score=67.08  Aligned_cols=113  Identities=12%  Similarity=0.009  Sum_probs=74.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCCC--c---cccccccCCCceEEEeccccchhccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTGR--K---DNLVHHFRNPRFELIRHDVVEPILLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~~--~---~~~~~~~~~~~~~~~~~D~~~~~~~~vD  182 (335)
                      +.-||.|+||+|.||+.++-.|.....       ++.+++..+...  +   .++.+..-.........+-..+++.++|
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~ad  102 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVA  102 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCC
Confidence            345999999999999999988876532       677777643211  1   1111111111223344444556789999


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEe
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTS  229 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iS  229 (335)
                      +||-+||..  ......-.+.++.|..-.+.+.+...+..   ++++.+|
T Consensus       103 vVvi~aG~p--rkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A          103 IAIMCGAFP--RKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             EEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEECCCCC--CCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            999999853  33334567889999999999999988754   2455555

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.75  E-value=0.00014  Score=58.49  Aligned_cols=71  Identities=20%  Similarity=0.272  Sum_probs=51.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++++.....+.+.... ...+.++.+|..++      .+.++|+||-+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            357999995 999999999999999999999986321111222111 23467888887664      267899999865

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.71  E-value=6.6e-05  Score=68.87  Aligned_cols=94  Identities=18%  Similarity=0.170  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      +++|+|.||||+||+.+++.|+++++   +++.+...... .....  +....+.+.+.|  .+.+.++|+||.+.+.  
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~-g~~~~--~~g~~i~~~~~~--~~~~~~~DvV~~a~g~--   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG--FAESSLRVGDVD--SFDFSSVGLAFFAAAA--   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE--ETTEEEECEEGG--GCCGGGCSEEEECSCH--
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCccc--cCCcceEEecCC--HHHhcCCCEEEEcCCc--
Confidence            36899999999999999999997654   55555422111 01111  111122222222  2335789999988752  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                      ..+..++..+.+.|+++|.+|+..
T Consensus        79 ----------------~~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           79 ----------------EVSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ----------------HHHHHHHHHHHHCCCEEEEeCCCC
Confidence                            123467777778888888778754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.69  E-value=0.00021  Score=65.22  Aligned_cols=109  Identities=15%  Similarity=0.058  Sum_probs=71.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccc---ccc---cC-CCceEEEeccccchhccCCCE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNL---VHH---FR-NPRFELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~---~~~---~~-~~~~~~~~~D~~~~~~~~vD~  183 (335)
                      +..+.|+|.|+|| |.+|..++..|+..|+ +|++++++++......   .+.   .. ..++.. ..|. ++++.++|+
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~-~ea~~~aDi   81 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSY-EAALTGADC   81 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSH-HHHHTTCSE
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCH-HHHhCCCCE
Confidence            3445579999998 9999999999999998 9999998765333211   111   11 112221 1333 346899999


Q ss_pred             EEEccCCCCCCCccC---ChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          184 IYHLACPASPVHYKY---NPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       184 Vih~A~~~~~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      ||-++|.......+.   .-......|+.-...+.+.+.+...
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p  124 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP  124 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            999987432211100   3345577888888888888887754

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.68  E-value=9.7e-05  Score=66.20  Aligned_cols=109  Identities=16%  Similarity=0.062  Sum_probs=73.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---ccccc--CCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHF--RNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |||.|+|| |.||+.++..|+.++.  ++.++|..+...+..   +.+..  -.....+...+ ..+.+.++|+||-.||
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~-d~~~~~~aDvVvitAG   78 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-DYSLLKGSEIIVVTAG   78 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES-CGGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC-CHHHhCCCCEEEEecC
Confidence            68999995 9999999999988874  899988764322211   11110  01112222222 1246899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  ......-.+.++.|..-.+.+.+.+.+.+.  .++.+|
T Consensus        79 ~p--rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           79 LA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             CC--CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             CC--CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            43  333356778899999999999999988875  344444

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.68  E-value=8.3e-05  Score=67.40  Aligned_cols=109  Identities=15%  Similarity=0.104  Sum_probs=74.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC--CCCccc---ccccc----CCCceEEEeccccchhccCCCEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF--TGRKDN---LVHHF----RNPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~--~~~~~~---~~~~~----~~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +.++|.|+|+ |.+|..++..|+..|. +|+++++++  ...+..   +.+..    ...++.. ..|  .+.+.++|+|
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d--~~a~~~aDvV   82 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD--YADTADSDVV   82 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC--GGGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC--HHHhCCCCEE
Confidence            4569999996 9999999999999999 999999873  211111   11110    1112221 122  3578999999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      |-+||...  .....-...++.|+.-...+.+.+.+.+.  .++.+|
T Consensus        83 Iiaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           83 VITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            99988432  22334567889999999999999888764  555555

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.66  E-value=0.00015  Score=66.12  Aligned_cols=110  Identities=17%  Similarity=0.165  Sum_probs=75.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---cccc--cCCCceEEE-eccccchhccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHH--FRNPRFELI-RHDVVEPILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~-~~D~~~~~~~~vD~Vi  185 (335)
                      ...++|.|+|+ |.+|..++..|+..|.  +|++++++....+..   +.+.  +. ....++ ..|.  +.+.++|+||
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~-~~~~i~~~~d~--~~~~~aDiVv   92 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL-KTPKIVSSKDY--SVTANSKLVI   92 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC-SCCEEEECSSG--GGGTTEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc-CCCeEEEcCCH--HHhCCCCEEE
Confidence            45679999997 9999999999999987  899998864322211   1111  11 112233 2333  3589999999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .+||...  .....-...++.|+.-...+.+.+.+...  .++.+|
T Consensus        93 i~aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           93 ITAGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             ECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998532  22345567889999999999999988764  555555

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.63  E-value=0.00031  Score=64.82  Aligned_cols=94  Identities=15%  Similarity=0.195  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      +++|.|.||||++|..|++.|.++++   ++..+.... .......  +..  .++...+.....+.++|+||-+++.  
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-saG~~~~--~~~--~~~~~~~~~~~~~~~~Dvvf~a~~~--   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-SAGKSLK--FKD--QDITIEETTETAFEGVDIALFSAGS--   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-TTTCEEE--ETT--EEEEEEECCTTTTTTCSEEEECSCH--
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-cCCCcce--ecC--CCceEeeCCHHHhcCCCEEEECCCh--
Confidence            45899999999999999998888765   444443211 1111111  111  2333333333456889999988741  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                      ..+...+..+.+.|+++|-.|+..
T Consensus        75 ----------------~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           75 ----------------STSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------HhHHHHHHHHHHCCCEEEEcCCcc
Confidence                            123356666677888988888864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.60  E-value=6.3e-05  Score=66.75  Aligned_cols=74  Identities=18%  Similarity=0.246  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC-CceEEEeccccchhc-cCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPIL-LEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~-~~vD~Vih~A~~  190 (335)
                      ..++++++|+|+ |.+|+.++..|++.|.+|++++|+.+...+ +...+.. ..++.  .|. +... .++|+||++++.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~-la~~~~~~~~~~~--~~~-~~~~~~~~DivVn~t~~  190 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEE-LAKLFAHTGSIQA--LSM-DELEGHEFDLIINATSS  190 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHH-HHHHTGGGSSEEE--CCS-GGGTTCCCSEEEECCSC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHhhccCCeeE--ecH-HHhccCCCCEEEECCCC
Confidence            346789999998 789999999999999999999887543221 1111111 12322  222 1111 589999999875


Q ss_pred             C
Q 019794          191 A  191 (335)
Q Consensus       191 ~  191 (335)
                      .
T Consensus       191 ~  191 (271)
T 1nyt_A          191 G  191 (271)
T ss_dssp             G
T ss_pred             C
Confidence            3

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.58  E-value=1.5e-05  Score=67.02  Aligned_cols=37  Identities=16%  Similarity=0.112  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+||||+|.||..+++.+...|++|++++++++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~   74 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA   74 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4679999999999999999999999999999988643

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.56  E-value=0.00055  Score=63.20  Aligned_cols=114  Identities=15%  Similarity=0.051  Sum_probs=72.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--e---EEEEecCCCCC----ccccccccCCC--c-eEEEeccccchhccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--E---VIVIDNFFTGR----KDNLVHHFRNP--R-FELIRHDVVEPILLEVD  182 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~---V~~~~r~~~~~----~~~~~~~~~~~--~-~~~~~~D~~~~~~~~vD  182 (335)
                      +.+||.|+||+|.||.+++-.|+..+.  +   |.+.+.+....    +....+.....  - -.+...+-..+.+.++|
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daD  110 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  110 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCC
Confidence            345899999999999999999988764  2   66655433221    11111111111  1 12222333356789999


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc-C--CeEEEEec
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-G--AKFLLTST  230 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~r~v~iSS  230 (335)
                      +||-.||.  +.....+-...++.|+.-...+.+.+.+. +  +.++.+|-
T Consensus       111 vVVitag~--prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          111 WALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             EEEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            99999874  22233456778999999999999998875 3  35666553

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.55  E-value=0.00029  Score=64.18  Aligned_cols=110  Identities=15%  Similarity=0.169  Sum_probs=72.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC----CceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN----PRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +.+||.|+|| |.+|..++..|+..+.  +|++++++....+....+....    ..+.+.. | ..+++.++|+||..+
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~a   84 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A-EYSDAKDADLVVITA   84 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGGGCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEEcC
Confidence            3469999998 9999999999988875  8999988643322111111111    2333433 3 356789999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      +...  .....-...+..|+.....+++.+.+.+.  .++.+|
T Consensus        85 g~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           85 GAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            7532  22233456778899999999998888764  555553

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.51  E-value=0.00014  Score=65.78  Aligned_cols=109  Identities=10%  Similarity=0.024  Sum_probs=72.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---cccc--cCCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHH--FRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++......   +.+.  .......+...+ ..+++.++|+||.+||
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~-~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN-DYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES-SSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC-CHHHhCCCCEEEECCC
Confidence            58999996 9999999999999886  899999876533211   1111  001122332122 2467899999999987


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  .....+-...++.|+.-...+.+.+.+.+.  .++.+|
T Consensus        79 ~~--~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           79 LP--RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             CC--CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            42  222234567789999999999999988764  455555

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.50  E-value=0.00028  Score=65.52  Aligned_cols=100  Identities=11%  Similarity=0.026  Sum_probs=59.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCC----------CceEEEeccccch-hccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN----------PRFELIRHDVVEP-ILLEV  181 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~-~~~~v  181 (335)
                      .++++|.|.||||++|..|++.|.++.. ++..+.-+.+..-..+.+.+..          ....+.+  .... .+.++
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~--~~~~~~~~~~   94 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE--CKPEGNFLEC   94 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE--SSSCTTGGGC
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEe--CchhhhcccC
Confidence            3456899999999999999998877654 6755532222111111111000          1122222  2222 46789


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      |+||-+.+.                  ..+..++..+.+.|+++|-.|+..=
T Consensus        95 Dvvf~alp~------------------~~s~~~~~~~~~~G~~VIDlSa~fR  128 (381)
T 3hsk_A           95 DVVFSGLDA------------------DVAGDIEKSFVEAGLAVVSNAKNYR  128 (381)
T ss_dssp             SEEEECCCH------------------HHHHHHHHHHHHTTCEEEECCSTTT
T ss_pred             CEEEECCCh------------------hHHHHHHHHHHhCCCEEEEcCCccc
Confidence            999987641                  1233566666778889998888653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.50  E-value=0.00037  Score=63.04  Aligned_cols=108  Identities=14%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccccC----CCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHFR----NPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.|+|| |.+|..++..|+..+  .+|++++++.+..+....+...    ...+.+.. + ..+++.++|+||..++.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~-~~~a~~~aD~Vii~ag~   77 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G-SYGDLEGARAVVLAAGV   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGTTEEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C-CHHHhCCCCEEEECCCC
Confidence            58999998 999999999999887  4899999875322211111111    12334433 3 25678999999999975


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  .....-......|+.-...+++.+.+.+.  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           78 AQ--RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             CC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CC--CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            32  22234456778899999999998888764  555553

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.50  E-value=0.00039  Score=63.20  Aligned_cols=110  Identities=15%  Similarity=0.031  Sum_probs=74.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---cccccC-CCceEEE-eccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHFR-NPRFELI-RHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~-~~D~~~~~~~~vD~Vih~  187 (335)
                      ..++|.|+|+ |.+|..++..|+..|.  +|++++.+.+..+..   +.+... .....+. ..|..  .+.++|+||-+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~--~~~daDiVIit   96 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS--VSAGSKLVVIT   96 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC--SCSSCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH--HhCCCCEEEEe
Confidence            4579999998 9999999999999986  899998865432211   111100 1112222 23442  38999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||...  ....+-.+.+..|+.-...+++.+.+.+.  .++.+|
T Consensus        97 aG~p~--kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           97 AGARQ--QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             CSCCC--CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            98532  22234556778999999999999888764  455555

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.48  E-value=0.00029  Score=64.73  Aligned_cols=94  Identities=11%  Similarity=0.124  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccccc---ccCC-CceEEEeccccchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVH---HFRN-PRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +++|.|.||||+||+.+++.|.++.. +++.+.+.... ...+..   .+.. ..+.+.  +. ++ +.++|+||.+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~-g~~~~~~~~~~~g~~~~~~~--~~-~~-~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFA-GEPVHFVHPNLRGRTNLKFV--PP-EK-LEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTT-TSBGGGTCGGGTTTCCCBCB--CG-GG-CCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhh-CchhHHhCchhcCccccccc--ch-hH-hcCCCEEEEcCCc
Confidence            46899999999999999999998765 77777653221 111111   1111 122222  22 22 5789999998753


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      .                  .+..++..+.+.|+++|-.|+..
T Consensus        79 ~------------------~s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           79 G------------------VFAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             T------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence            1                  13356666777888988888853

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.46  E-value=0.00048  Score=63.46  Aligned_cols=97  Identities=14%  Similarity=0.123  Sum_probs=58.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCC----------CceEEEeccccchhcc-CCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN----------PRFELIRHDVVEPILL-EVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~-~vD~V  184 (335)
                      ++|.|.||+|+||+.+++.|.+.+. +|+.+.++.......+......          ..+.+...|. ++.+. ++|+|
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~DvV   87 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDP-KHEEFEDVDIV   87 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCT-TSGGGTTCCEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCH-HHHhcCCCCEE
Confidence            5899999999999999999988754 8887765332221111111000          1111222232 22335 89999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      |.+.+.                  ..+..++..+.+.|+++|-.|+..
T Consensus        88 ~~atp~------------------~~~~~~a~~~~~aG~~VId~s~~~  117 (354)
T 1ys4_A           88 FSALPS------------------DLAKKFEPEFAKEGKLIFSNASAY  117 (354)
T ss_dssp             EECCCH------------------HHHHHHHHHHHHTTCEEEECCSTT
T ss_pred             EECCCc------------------hHHHHHHHHHHHCCCEEEECCchh
Confidence            987641                  123346666677888877777653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.46  E-value=0.00029  Score=63.99  Aligned_cols=108  Identities=16%  Similarity=0.155  Sum_probs=69.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---ccccc-CCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHF-RNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +||.|+|| |.+|..++..|+..+.  +|++++++.......   +.+.. -...+.+.. | ..+++.++|+||..++.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~-~~~a~~~aDvVii~ag~   82 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G-EYSDCKDADLVVITAGA   82 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C-CGGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEECCCC
Confidence            69999998 9999999999998876  899998864332211   11110 012333433 3 35678999999999975


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ...  ....-...+..|+.....+++.+.+.+.  .++.+|
T Consensus        83 ~~~--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           83 PQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            321  1223345678899999999999888764  555553

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.46  E-value=1.9e-05  Score=76.78  Aligned_cols=108  Identities=13%  Similarity=0.091  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      .++++++|||| |++|++++..|++.|++|+++.|+.+...+ +...+.. .+..+ .|+.+-....+|+|||+++....
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~-la~~~~~-~~~~~-~dl~~~~~~~~DilVN~agvg~~  437 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALE-LAEAIGG-KALSL-TDLDNYHPEDGMVLANTTSMGMQ  437 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHH-HHHHTTC--CEET-TTTTTC--CCSEEEEECSSTTCT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHcCC-ceeeH-HHhhhccccCceEEEECCCCCCC
Confidence            46789999999 799999999999999999999886433221 2222211 11111 12211123458999999986321


Q ss_pred             C-----Cc----cCChhhHHhhHHHHHH-HHHHHHHHcCCeE
Q 019794          194 V-----HY----KYNPVKTIKTNVMGTL-NMLGLAKRVGAKF  225 (335)
Q Consensus       194 ~-----~~----~~~~~~~~~~Nv~gt~-~ll~~a~~~~~r~  225 (335)
                      .     ..    ...+...+++|+.+.. .+++.+++.|.++
T Consensus       438 ~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~~~  479 (523)
T 2o7s_A          438 PNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAIT  479 (523)
T ss_dssp             TCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTCEE
T ss_pred             CCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCCEE
Confidence            1     11    1123445566665422 4566666666554

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.45  E-value=0.0004  Score=63.41  Aligned_cols=98  Identities=12%  Similarity=0.155  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCC--CCcccccc---ccCC-CceEEEec-cccchhccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFT--GRKDNLVH---HFRN-PRFELIRH-DVVEPILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~--~~~~~~~~---~~~~-~~~~~~~~-D~~~~~~~~vD~Vih~  187 (335)
                      |++|.|.||||++|..|++.|.+.. .++..+.....  .....+.+   .+.. ..+.+... |. +....++|+||-+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~-~~~~~~~Dvvf~a   82 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDI-SEFSPGVDVVFLA   82 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSG-GGTCTTCSEEEEC
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCH-HHHhcCCCEEEEC
Confidence            5799999999999999999998854 47777755431  11111111   1111 12222222 22 1223789999987


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      .+.                  ..+..++..+.+.|+++|-.|+..
T Consensus        83 ~p~------------------~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           83 TAH------------------EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             SCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCh------------------HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            641                  123356666677889999999864

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.44  E-value=0.00038  Score=64.07  Aligned_cols=96  Identities=10%  Similarity=0.128  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCC----------CceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRN----------PRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +++|.|.||+|++|+.+++.|.+... +|+.+..+.......+......          ..+.+.+.|.  +.+.++|+|
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~vDvV   81 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNY--EDHKDVDVV   81 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSG--GGGTTCSEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCH--HHhcCCCEE
Confidence            46899999999999999999987754 7777752211111111111110          1222322232  334789999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                      |-+.+.                  ..+..++..+.+.|+++|-.|+.
T Consensus        82 f~atp~------------------~~s~~~a~~~~~aG~~VId~s~~  110 (350)
T 2ep5_A           82 LSALPN------------------ELAESIELELVKNGKIVVSNASP  110 (350)
T ss_dssp             EECCCH------------------HHHHHHHHHHHHTTCEEEECSST
T ss_pred             EECCCh------------------HHHHHHHHHHHHCCCEEEECCcc
Confidence            977641                  12446777788889897777765

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.44  E-value=0.0011  Score=60.55  Aligned_cols=94  Identities=15%  Similarity=0.187  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC---CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG---DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      +++|.|.||+|+||+.+++.|++++   .+++.+...... .....  +....+.+.+.|  ...+.++|+||-+.+.  
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~--~~~~~i~~~~~~--~~~~~~vDvVf~a~g~--   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR--FNGKTVRVQNVE--EFDWSQVHIALFSAGG--   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE--ETTEEEEEEEGG--GCCGGGCSEEEECSCH--
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee--ecCceeEEecCC--hHHhcCCCEEEECCCc--
Confidence            5689999999999999999999884   266666532111 11111  111223333222  2345689999987752  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                      ..+...+..+.+.|+++|-.|+..
T Consensus        76 ----------------~~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           76 ----------------ELSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------hHHHHHHHHHHHcCCEEEEcCCcc
Confidence                            124456677778888888888864

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.43  E-value=0.0011  Score=59.94  Aligned_cols=108  Identities=14%  Similarity=0.082  Sum_probs=69.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecCCCCCcccc---cccc--CCCceEEEe-ccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNL---VHHF--RNPRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~---~~~~--~~~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|+|+ |.+|..++..|+..  |++|+++++++.......   .+..  ......+.. .|. + .+.++|+||-++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~-~l~~aDvViiav   77 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY-A-DTANSDIVIITA   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG-G-GGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCH-H-HHCCCCEEEEeC
Confidence            58999998 99999999999985  789999999765332211   1100  001222222 343 3 388999999988


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      +.  +..........+..|+.-...+++.+.+...  .++.++
T Consensus        78 ~~--p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           78 GL--PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             SC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             CC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            63  2111223456777888888888888877653  455543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.42  E-value=0.001  Score=60.36  Aligned_cols=108  Identities=13%  Similarity=0.134  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccc---cccc--CCCceEEEe-ccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNL---VHHF--RNPRFELIR-HDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~---~~~~--~~~~~~~~~-~D~~~~~~~~vD~Vih~A  188 (335)
                      +++|.|+|| |.+|..++..|+..|. +|++++++++......   .+..  ......+.. .|.  +++.++|+||-++
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~--~al~~aD~Vi~a~   80 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--DDLAGADVVIVTA   80 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH--HHhCCCCEEEEeC
Confidence            468999998 9999999999999998 9888888754332111   1110  011222222 343  5689999999998


Q ss_pred             CCCCCCCccCC-----hhhHHhhHHHHHHHHHHHHHHcCC--eEEEE
Q 019794          189 CPASPVHYKYN-----PVKTIKTNVMGTLNMLGLAKRVGA--KFLLT  228 (335)
Q Consensus       189 ~~~~~~~~~~~-----~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~i  228 (335)
                      +...  .....     -......|+.-...+.+.+.+...  .+|++
T Consensus        81 g~p~--k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  125 (322)
T 1t2d_A           81 GFTK--APGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  125 (322)
T ss_dssp             SCSS--CTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCCC--CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            7422  11111     344567788888888888777653  44444

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.41  E-value=0.00056  Score=61.66  Aligned_cols=102  Identities=16%  Similarity=0.160  Sum_probs=63.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccC----CCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFR----NPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++............    .....+...|  .+++.++|+||.+++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~--~~a~~~aDvVIi~~~~   77 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG--HSELADAQVVILTAGA   77 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC--GGGGTTCSEEEECC--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC--HHHhCCCCEEEEcCCC
Confidence            58999998 9999999999999998  999999875422211111100    0122332223  3568899999998864


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      ...  ....-...+..|+.....+++.+.+...
T Consensus        78 ~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p  108 (304)
T 2v6b_A           78 NQK--PGESRLDLLEKNADIFRELVPQITRAAP  108 (304)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHCS
T ss_pred             CCC--CCCcHHHHHHhHHHHHHHHHHHHHHhCC
Confidence            221  1122335667888888899888887653

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.39  E-value=5.7e-05  Score=68.93  Aligned_cols=37  Identities=22%  Similarity=0.138  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+||||+|.||..++..+...|++|++++++.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~  181 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE  181 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5689999999999999999999999999999988643

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.36  E-value=0.00055  Score=62.46  Aligned_cols=93  Identities=20%  Similarity=0.131  Sum_probs=56.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEec--CCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN--FFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      ++|.|.||+|++|+.+++.|.++++.+..+..  +.+.....+.  +....+++...|.. + + ++|+||-+.|.    
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~--~~g~~i~v~~~~~~-~-~-~~DvV~~a~g~----   71 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA--FRGEEIPVEPLPEG-P-L-PVDLVLASAGG----   71 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE--ETTEEEEEEECCSS-C-C-CCSEEEECSHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE--EcCceEEEEeCChh-h-c-CCCEEEECCCc----
Confidence            47999999999999999999977664322211  1111111111  11123444444432 2 4 89999988752    


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                    ..+...+..+.+.|+++|-.|+..
T Consensus        72 --------------~~s~~~a~~~~~~G~~vId~s~~~   95 (331)
T 2yv3_A           72 --------------GISRAKALVWAEGGALVVDNSSAW   95 (331)
T ss_dssp             --------------HHHHHHHHHHHHTTCEEEECSSSS
T ss_pred             --------------cchHHHHHHHHHCCCEEEECCCcc
Confidence                          123345566667788888888863

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.35  E-value=0.0018  Score=59.24  Aligned_cols=94  Identities=19%  Similarity=0.111  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      +++|.|.||||++|..|++.|.++.+   ++..+..... .-..+.  +..  .++...+.....+.++|+||-+.+.  
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~-aG~~~~--~~~--~~~~~~~~~~~~~~~~Dvvf~a~~~--   73 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS-QGRKLA--FRG--QEIEVEDAETADPSGLDIALFSAGS--   73 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-SSCEEE--ETT--EEEEEEETTTSCCTTCSEEEECSCH--
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc-CCCcee--ecC--CceEEEeCCHHHhccCCEEEECCCh--
Confidence            35899999999999999998888743   4555542211 111111  111  2333333444556889999988751  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                      ..+...+..+.+.|+++|-.|+..
T Consensus        74 ----------------~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           74 ----------------AMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------HHHHHHHHHHHhCCCEEEECCCcc
Confidence                            123355666677788888888864

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.34  E-value=9.2e-05  Score=62.85  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=46.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc----CCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF----RNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|+|+||+|++|+.+++.|++.|++|++++|+.+.... +.+..    ....+.   .+..++.+.++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KAAEYRRIAGDASIT---GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HHHHHHHHHSSCCEE---EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhccccccCCCC---hhhHHHHHhcCCEEEEeC
Confidence            589999999999999999999999999999986543221 11110    001122   122334567899999976

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.32  E-value=0.00055  Score=58.34  Aligned_cols=67  Identities=15%  Similarity=0.241  Sum_probs=50.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++++++.... +..   ...+.++.+|.+++      .+.++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-l~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEE-FAK---KLKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHH---HSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHH---HcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            58999996 999999999999999999999986443221 111   12456788888765      256799999765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.28  E-value=0.00023  Score=58.95  Aligned_cols=69  Identities=19%  Similarity=0.239  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccch-----h--ccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----I--LLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~--~~~vD~Vi  185 (335)
                      ..+++|+|.| .|.+|..+++.|.+. |++|++++++++.... +.    ...+..+.+|..++     +  +.++|+||
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~----~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ-HR----SEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HH----HTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HH----HCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            3466899998 599999999999999 9999999986543221 11    12345566665442     2  56799999


Q ss_pred             Ecc
Q 019794          186 HLA  188 (335)
Q Consensus       186 h~A  188 (335)
                      .+.
T Consensus       111 ~~~  113 (183)
T 3c85_A          111 LAM  113 (183)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            865

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.27  E-value=0.00011  Score=68.21  Aligned_cols=75  Identities=19%  Similarity=0.245  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEE--EeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFEL--IRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ...+++|+|+|+ |.||..+++.|...|++|++++++...... +...+.. .+..  ...+..++.+.++|+||++++.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~-~~~~~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY-LDDVFGG-RVITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTTT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHhcCc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            356789999999 999999999999999999999986543221 1111111 1211  1222233456789999999874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.27  E-value=0.00011  Score=65.66  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC----C---ceEEEeccccchhccCCCEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN----P---RFELIRHDVVEPILLEVDQIY  185 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~----~---~~~~~~~D~~~~~~~~vD~Vi  185 (335)
                      ..++++++|||++ .+|++++..|++.| +|++.+|+.+...+ +...+..    .   .+++.  |+ .+.+.++|+||
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~-l~~~~~~~~~~~~~~~~d~~--~~-~~~~~~~DilV  198 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEA-LAKEIAEKLNKKFGEEVKFS--GL-DVDLDGVDIII  198 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHH-HHHHHHHHHTCCHHHHEEEE--CT-TCCCTTCCEEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHH-HHHHHhhhcccccceeEEEe--eH-HHhhCCCCEEE
Confidence            3567899999985 99999999999999 99999886432211 1111110    0   12222  22 34567899999


Q ss_pred             EccCCCC
Q 019794          186 HLACPAS  192 (335)
Q Consensus       186 h~A~~~~  192 (335)
                      ++++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.26  E-value=0.00069  Score=59.22  Aligned_cols=101  Identities=11%  Similarity=0.063  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc------------------cccc----cccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK------------------DNLV----HHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~------------------~~~~----~~~~~~~~~~~~  170 (335)
                      .++++|+|.|+ |.+|+++++.|++.|. +|++++++.-...                  +.+.    ...+...++.+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            45679999995 8999999999999997 8999988752110                  0011    111122455555


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      .++.+    +.+.++|+||.+..                 |...-..+.++|++.++.+|..+...
T Consensus       108 ~~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          108 ALLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             ccCCHhHHHHHHhCCCEEEEeCC-----------------CHHHHHHHHHHHHHcCCCEEEeeecc
Confidence            54442    35678999998652                 12223456677888887777766543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.24  E-value=0.0022  Score=58.44  Aligned_cols=107  Identities=14%  Similarity=0.077  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc---ccccc----CCCceEEEeccccchhccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN---LVHHF----RNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~---~~~~~----~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .++|.|+|| |.+|..++..|+..|+ +|++++++++.....   +.+..    ...++... .|.  +++.++|+||-+
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--~al~~aD~VI~a   89 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY--EYLQNSDVVIIT   89 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH--HHHCCCCEEEEc
Confidence            358999998 9999999999999998 999999876533321   11110    11223221 443  578999999998


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEE
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLT  228 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~i  228 (335)
                      ++...  .....-......|+.-...+.+.+.+...  .++++
T Consensus        90 vg~p~--k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  130 (328)
T 2hjr_A           90 AGVPR--KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI  130 (328)
T ss_dssp             CSCCC--CTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCCC--CCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence            87422  11112234566788888888887777643  34444

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.23  E-value=0.0016  Score=59.08  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=72.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---ccccc--CCCceEEEeccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHF--RNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      ++++|.|+|| |.+|..++..|+..+.  +|.+++.++......   +.+..  ....+.+.. | ..+++.++|+||.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~-~~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G-EYSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C-CGGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C-CHHHhCCCCEEEEC
Confidence            3469999998 9999999999998884  899998764322211   11111  112333333 3 25668999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEE
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLT  228 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~i  228 (335)
                      ++...  .....-...+..|+.-...+++.+.+...  .++.+
T Consensus        82 ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           82 AGAAQ--KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            97532  22234456678899988999988888754  44443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.22  E-value=0.00061  Score=60.33  Aligned_cols=73  Identities=14%  Similarity=0.268  Sum_probs=43.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCCCc-cccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVI-DNFFTGRK-DNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +++||.|.|++|.+|+.+++.+.+. +.+++.+ ++...... ........... .+...+..++.+.++|+||.+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~-gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT-GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC-SCBCBCCHHHHHHHCSEEEECS
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC-CceecCCHHHHhcCCCEEEEcC
Confidence            3579999999999999999999876 4477664 54422111 11111111011 1112233344556789999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.21  E-value=8.8e-05  Score=67.72  Aligned_cols=74  Identities=19%  Similarity=0.148  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eEEEeccccch----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FELIRHDVVEP----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~----~~~~vD~Vih~A~  189 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++++.... +...+.... ++....|..+.    .-.++|+||+++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRF-LVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            57799999999999999999999999999999986543221 101111111 11111122111    1136999999986

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.20  E-value=0.00019  Score=65.81  Aligned_cols=38  Identities=26%  Similarity=0.203  Sum_probs=34.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++...
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~  206 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK  206 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH
Confidence            46799999999999999999999999999999987543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.20  E-value=0.00032  Score=62.17  Aligned_cols=73  Identities=14%  Similarity=0.301  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCC-CceEEEeccccchhc-cCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPIL-LEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~-~~vD~Vih~A~~  190 (335)
                      ..++++++|+|+ |.+|++++..|++.|.+|++..|+.++..+ +...+.. ..++..  |. +... .++|+||++++.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~-l~~~~~~~~~~~~~--~~-~~~~~~~~DivIn~t~~  190 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKE-LAERFQPYGNIQAV--SM-DSIPLQTYDLVINATSA  190 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHH-HHHHHGGGSCEEEE--EG-GGCCCSCCSEEEECCCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHccccCCeEEe--eH-HHhccCCCCEEEECCCC
Confidence            356789999997 789999999999999999999987543222 2111111 123222  22 1111 489999999864

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.19  E-value=0.00057  Score=63.05  Aligned_cols=95  Identities=17%  Similarity=0.260  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccccc---ccCCCc-eEEEeccccchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVH---HFRNPR-FELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~-~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +++|.|.||+|+||+.+++.|.++.. +++.+.+.... ...+..   .+.... .++...+  ++.+.++|+||.+++.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~-g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp~   92 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKA-GQSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLPH   92 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTT-TSCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhc-CCCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCCc
Confidence            35899999999999999999998865 77777654221 111111   111100 1111112  3345689999998753


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      ..                  +...+..+ +.|+++|-.|+..
T Consensus        93 ~~------------------s~~~a~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A           93 GT------------------TQEIIKEL-PTALKIVDLSADF  115 (359)
T ss_dssp             TT------------------HHHHHHTS-CTTCEEEECSSTT
T ss_pred             hh------------------HHHHHHHH-hCCCEEEECCccc
Confidence            21                  23455666 6778888888753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.00012  Score=67.44  Aligned_cols=37  Identities=16%  Similarity=0.108  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~  206 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE  206 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh
Confidence            4679999999999999999999999999999998654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.17  E-value=0.0001  Score=67.95  Aligned_cols=35  Identities=29%  Similarity=0.153  Sum_probs=32.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      ++|+|+||+|.||..++..+...|+ +|++++++..
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~  197 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE  197 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH
Confidence            7999999999999999999999999 9999988643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.12  E-value=0.002  Score=50.82  Aligned_cols=66  Identities=21%  Similarity=0.196  Sum_probs=50.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      ++|+|.|+ |.+|..+++.|.+.|++|++++++++.... +    ....+.++.+|..++.      +.++|+||-+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~----~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-L----RERGVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-H----HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-H----HHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            47999996 999999999999999999999987543221 1    1235677888887652      45789998765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.11  E-value=0.0002  Score=56.90  Aligned_cols=70  Identities=13%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +++|+|.|+ |.+|+.++..|.+.|++|++.+|+...... +...+.   .+....+...+.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a~~~~---~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FAEKYE---YEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HHHHHT---CEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HHHHhC---CceEeecCHHHHhcCCCEEEEeCCC
Confidence            679999995 999999999999999998888886543222 122211   3444444455667889999998753

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.11  E-value=9.6e-05  Score=67.21  Aligned_cols=37  Identities=16%  Similarity=0.033  Sum_probs=33.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+||||+|.||..++..+...|++|+++++++.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~  176 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ  176 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4679999999999999999999999999999988643

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.09  E-value=0.00013  Score=67.31  Aligned_cols=37  Identities=14%  Similarity=0.072  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~  198 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK  198 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            4679999999999999999999999999999998644

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.08  E-value=0.00037  Score=62.63  Aligned_cols=77  Identities=18%  Similarity=0.130  Sum_probs=50.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      ..++++|+|+|+ |.+|+.++..|++.|. +|++..|+.++.. .+.+.+....-+.+..+...+.+.++|+||++.+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~-~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAE-RLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH-HHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            356789999997 7899999999999998 9999988653322 122211110002222233334567899999988643

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.07  E-value=0.0021  Score=58.18  Aligned_cols=104  Identities=18%  Similarity=0.187  Sum_probs=69.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---cccccC--CCceEEEeccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHFR--NPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~~--~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      +.++|.|+|+ |.+|..++..|+..|.  +|++++++....+..   +.+...  ...+.+.. + ..+++.++|+||-+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~-~~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G-DYDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C-CGGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C-cHHHhCCCCEEEEc
Confidence            3469999998 9999999999988774  899999875422211   111111  11333433 2 23568999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      ++......  ......+..|..-...+++.+.+...
T Consensus        82 ~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p  115 (316)
T 1ldn_A           82 AGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGF  115 (316)
T ss_dssp             CSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCC
Confidence            87543222  23345677888888888888877754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.07  E-value=0.00035  Score=63.20  Aligned_cols=76  Identities=9%  Similarity=0.062  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCC--CccccccccC---CCceEEEeccc---cchhccCCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG--RKDNLVHHFR---NPRFELIRHDV---VEPILLEVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~--~~~~~~~~~~---~~~~~~~~~D~---~~~~~~~vD~  183 (335)
                      ..++++++|+|+ |.+|++++..|.+.|. +|+++.|+.+.  +.+.+...+.   ...+..+..+.   ..+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            457899999997 8999999999999998 89999997321  1111111111   12234444332   2235678999


Q ss_pred             EEEccC
Q 019794          184 IYHLAC  189 (335)
Q Consensus       184 Vih~A~  189 (335)
                      ||++..
T Consensus       230 IINaTp  235 (315)
T 3tnl_A          230 FTNATG  235 (315)
T ss_dssp             EEECSS
T ss_pred             EEECcc
Confidence            999764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.06  E-value=0.00039  Score=62.04  Aligned_cols=76  Identities=14%  Similarity=0.122  Sum_probs=51.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc---cccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ..++++++|+|+ |.+|++++..|.+.|. +|++++|+.++..+...   .......+.....+...+.+.++|+||++.
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT  202 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence            356889999997 8999999999999998 79999887543221111   111122344444334445667899999976


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      .
T Consensus       203 p  203 (283)
T 3jyo_A          203 P  203 (283)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.05  E-value=0.00019  Score=65.73  Aligned_cols=37  Identities=16%  Similarity=0.032  Sum_probs=33.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++..
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~  191 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE  191 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            5689999999999999999999999999999988643

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.05  E-value=0.00083  Score=57.60  Aligned_cols=76  Identities=18%  Similarity=0.263  Sum_probs=59.6

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEc
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .|...+.++++|||.|| |-+|...++.|++.|++|++++....   ..+........+.++..+..+..+.++|.||-+
T Consensus        23 ~Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~---~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaA   98 (223)
T 3dfz_A           23 YTVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS---AEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVA   98 (223)
T ss_dssp             CEEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC---HHHHHHHHTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred             cccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHcCCcEEEECCCCHhHhCCCCEEEEC
Confidence            57777889999999996 89999999999999999999976432   222222234567888888877788999999854

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.04  E-value=0.003  Score=57.10  Aligned_cols=108  Identities=15%  Similarity=0.087  Sum_probs=68.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc---cc---c-CCCceEEEeccccchhccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV---HH---F-RNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~---~~---~-~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      .++|.|.|+ |.+|..++..|+..|+ +|++++++++.......   +.   . ...++.. ..|.  +.+.++|+||-+
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~--~a~~~aDiVi~a   79 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDDY--ADISGSDVVIIT   79 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCCH--HHhCCCCEEEEe
Confidence            468999997 9999999999999998 99999987643322110   00   0 0112222 1343  567899999998


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ++....  ....-.+....|......+++.+.+...  .++.+|
T Consensus        80 vg~p~~--~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           80 ASIPGR--PKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             CCCSSC--CSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CCCCCC--CCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            874322  2223334556677777777777766543  344444

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.04  E-value=0.0011  Score=60.96  Aligned_cols=97  Identities=14%  Similarity=0.118  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC------C----CceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR------N----PRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +.+|.|.||||++|..|++.|.+... ++..+..... .-..+...++      .    ....+..  ...+.+.++|+|
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~--~~~~~~~~vDvv   83 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKP--TDPKLMDDVDII   83 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEE--CCGGGCTTCCEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEe--CCHHHhcCCCEE
Confidence            45899999999999999998777654 6666643222 1111111100      0    0112222  222345789999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      |.+.+...                  +..++..+.+.|+++|-.|+..-
T Consensus        84 f~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpl_A           84 FSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EECCCTTT------------------HHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EECCChHH------------------HHHHHHHHHHCCCEEEEcCCCcc
Confidence            98875311                  12455566677889999998743

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.04  E-value=0.0011  Score=60.96  Aligned_cols=97  Identities=14%  Similarity=0.118  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC------C----CceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR------N----PRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +.+|.|.||||++|..|++.|.+... ++..+..... .-..+...++      .    ....+..  ...+.+.++|+|
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~--~~~~~~~~vDvv   83 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKP--TDPKLMDDVDII   83 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEE--CCGGGCTTCCEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEe--CCHHHhcCCCEE
Confidence            45899999999999999998777654 6666643222 1111111100      0    0112222  222345789999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      |.+.+...                  +..++..+.+.|+++|-.|+..-
T Consensus        84 f~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~R  114 (359)
T 4dpk_A           84 FSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDHR  114 (359)
T ss_dssp             EECCCTTT------------------HHHHHHHHHHTTCEEEECSSTTT
T ss_pred             EECCChHH------------------HHHHHHHHHHCCCEEEEcCCCcc
Confidence            98875311                  12455566677889999998743

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.04  E-value=0.00013  Score=66.47  Aligned_cols=37  Identities=19%  Similarity=0.081  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~  181 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE  181 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4679999999999999999999999999999998643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.01  E-value=0.00088  Score=59.32  Aligned_cols=73  Identities=15%  Similarity=0.253  Sum_probs=49.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++++|+|+ |.+|+.++..|.+.|. +|++..|+.++..+ +...+....+.....+....  .++|+||++..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~~~~~~~~~~~l~~--~~~DivInaTp  190 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALA-LRNELDHSRLRISRYEALEG--QSFDIVVNATS  190 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHH-HHHHHCCTTEEEECSGGGTT--CCCSEEEECSS
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhccCCeeEeeHHHhcc--cCCCEEEECCC
Confidence            457889999997 8999999999999996 99999886543222 22222212344443332222  67999999754

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.00  E-value=0.0035  Score=56.53  Aligned_cols=103  Identities=19%  Similarity=0.171  Sum_probs=64.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcc-c--cccccC-CCceEEEeccccchhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKD-N--LVHHFR-NPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~-~--~~~~~~-~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +|+|.|.|+ |.+|..++..|+..|+  +|++++++...... .  +.+... .....+...+. .+.+.++|+||-+++
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~   84 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAG   84 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCC
Confidence            469999997 9999999999999998  99999987532210 0  111110 01222222211 246788999999886


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG  222 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~  222 (335)
                      ....  ........+..|+.....+++...+.+
T Consensus        85 ~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           85 PRQK--PGQSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             CCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3221  123344566777777777777766554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.98  E-value=0.00071  Score=60.08  Aligned_cols=70  Identities=17%  Similarity=0.141  Sum_probs=49.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++++|+|+ |.+|+.++..|.+.|. +|++..|+.+...+.. .     .+.....+...+.+.++|+||++..
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-~-----~~~~~~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS-L-----NINKINLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-S-----CCEEECHHHHHHTGGGCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-H-----hcccccHhhHHHHhcCCCEEEECcc
Confidence            356789999996 8999999999999998 8999988754322211 1     2233333333445678999998754

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.98  E-value=0.0024  Score=57.89  Aligned_cols=107  Identities=17%  Similarity=0.133  Sum_probs=68.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcccc---ccccC-CCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNL---VHHFR-NPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |+|.|.|+ |.+|..++..|++.|+  +|+++++++.......   .+... .....+...|  .+.+.++|+||-+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d--~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC--HHHhCCCCEEEEccCC
Confidence            58999998 9999999999999998  9999998754222111   11000 0112222234  3467899999998864


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEE
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLT  228 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~i  228 (335)
                      ...  ...........|+.....+++.+.+...  .+|.+
T Consensus        78 ~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           78 PQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             CCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            221  1122445677788888888888877643  44444

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.97  E-value=0.0032  Score=56.76  Aligned_cols=107  Identities=13%  Similarity=0.108  Sum_probs=71.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccC-----CCceEEEe-ccccchhccCCCEEEEccCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFR-----NPRFELIR-HDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ||.|+|| |.+|..++..|+..+. +|++++++.+..+....+...     .....+.. .|.  +++.++|+||-.++.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~~ag~   77 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--EDMRGSDIVLVTAGI   77 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEECCSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--HHhCCCCEEEEeCCC
Confidence            5889998 9999999999988887 799999875433221111110     11223333 443  578999999999875


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  .....-......|+.-...+++.+.+...  .+|++|
T Consensus        78 ~~--k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           78 GR--KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             CC--CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            32  22234456678899999999998887653  555554

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.97  E-value=0.0017  Score=60.00  Aligned_cols=92  Identities=16%  Similarity=0.094  Sum_probs=52.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLID-RGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~-~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      |++|.|.||+|++|+.++++|+. +++   .++.+..+....  ... .+....+.+...+.. +.+.++|+||.+.+  
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~-~~~g~~i~~~~~~~~-~~~~~~DvVf~a~g--   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAP-SFGGTTGTLQDAFDL-EALKALDIIVTCQG--   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCC-GGGTCCCBCEETTCH-HHHHTCSEEEECSC--
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--Ccc-ccCCCceEEEecCCh-HHhcCCCEEEECCC--
Confidence            46899999999999999995544 443   555554432111  111 111112222322211 22568999998875  


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                                      ...+...+..+.+.|++.+.++
T Consensus        75 ----------------~~~s~~~a~~~~~~G~k~vVID   96 (367)
T 1t4b_A           75 ----------------GDYTNEIYPKLRESGWQGYWID   96 (367)
T ss_dssp             ----------------HHHHHHHHHHHHHTTCCCEEEE
T ss_pred             ----------------chhHHHHHHHHHHCCCCEEEEc
Confidence                            1233456666777887544444

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.93  E-value=0.00085  Score=59.72  Aligned_cols=73  Identities=12%  Similarity=0.120  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++++|+|+ |.+|+.++..|++.|. +|++..|+.+...+..........+.....+   +...++|+||++..
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~---~l~~~aDiIInaTp  196 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE---QLKQSYDVIINSTS  196 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---GCCSCEEEEEECSC
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH---HhcCCCCEEEEcCc
Confidence            357889999997 7899999999999996 9999998754322211111111123333322   22267999999764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.91  E-value=0.0032  Score=56.74  Aligned_cols=105  Identities=17%  Similarity=0.145  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCcccccc---c--cCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVH---H--FRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ||+|.|.| +|.+|..++..|++.|  ++|++++++.+........   .  +....+.+...|.  +.+.++|+||-++
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~--~~~~~aDvViiav   77 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW--AALADADVVISTL   77 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH--HHhCCCCEEEEec
Confidence            36899999 7999999999999999  7999999875432211110   0  0111233333454  5678999999987


Q ss_pred             CCCCCCC--ccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          189 CPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       189 ~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      +......  ...........|+.-...+++.+.+...
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~  114 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF  114 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            6422100  1112234566788777888887776543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.89  E-value=0.0059  Score=56.10  Aligned_cols=102  Identities=19%  Similarity=0.174  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELI  169 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~  169 (335)
                      ..+.++|+|.|+ |.+|+++++.|+..|. ++.+++++.-...+.                      +....+...++.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            345679999996 8899999999999998 888888764221111                      0111122345555


Q ss_pred             eccccchh----ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          170 RHDVVEPI----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       170 ~~D~~~~~----~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                      ..++.+..    +.++|+||.+..         ++..       .-..+-++|.+.++.+|..+..
T Consensus       194 ~~~i~~~~~~~~~~~~DlVvd~~D---------n~~~-------~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          194 ALNINDYTDLHKVPEADIWVVSAD---------HPFN-------LINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             ECCCCSGGGGGGSCCCSEEEECCC---------CSTT-------HHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ecccCchhhhhHhccCCEEEEecC---------ChHH-------HHHHHHHHHHHhCCCEEEEEEe
Confidence            55543322    788999998652         1110       1224557888888888876543

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.88  E-value=0.0039  Score=56.03  Aligned_cols=101  Identities=15%  Similarity=0.160  Sum_probs=67.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc--cCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+++|.|+|| |.+|..++..|+..|.  +|++++.+.+ ......+.  ....++... .|.  +.+.++|+||-.+|.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t-~d~--~~l~~aD~Vi~aag~   87 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS-KDL--SASAHSKVVIFTVNS   87 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEE-SCG--GGGTTCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe-CCH--HHHCCCCEEEEcCCC
Confidence            3469999996 9999999999999998  9999998764 22111111  222344442 454  568999999999986


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      ..   ....-......|+.-...+++.+.+...
T Consensus        88 ~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p  117 (303)
T 2i6t_A           88 LG---SSQSYLDVVQSNVDMFRALVPALGHYSQ  117 (303)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            32   1233455677888888888888777543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.79  E-value=0.0097  Score=54.49  Aligned_cols=104  Identities=14%  Similarity=0.149  Sum_probs=67.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~  170 (335)
                      .+..+|+|.|+ |++|.++++.|+..|. +++++|.+.-...+.                      +.+..+...++.+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            34569999995 8899999999999998 888887643111100                      11111223455555


Q ss_pred             ccc---cchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDV---VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~---~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      .++   .++.+.++|+||.+.                 .|...-..+-++|.+.++.+|..++...+|
T Consensus       113 ~~~~~~~~~~~~~~dvVv~~~-----------------d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          113 EDIEKKPESFFTQFDAVCLTC-----------------CSRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             SCGGGCCHHHHTTCSEEEEES-----------------CCHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             cccCcchHHHhcCCCEEEEcC-----------------CCHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            555   234567899999864                 233344467778888888888876655544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.76  E-value=0.00037  Score=63.52  Aligned_cols=71  Identities=20%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchh-----ccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPI-----LLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~-----~~~vD~Vih  186 (335)
                      .+++|+|+||+|.||...+..+...|++|++++++.+... .+. .+...  .+++.   |..+..     -.++|+||+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~-~~ga~--~~~~~~~~~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAK-EYGAE--YLINASKEDILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-HTTCS--EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-HcCCc--EEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence            4679999999999999999999999999999998644322 111 12211  12222   222211     136999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      ++|
T Consensus       224 ~~g  226 (334)
T 3qwb_A          224 SVG  226 (334)
T ss_dssp             CCG
T ss_pred             CCC
Confidence            986

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.76  E-value=0.0014  Score=55.89  Aligned_cols=66  Identities=15%  Similarity=0.157  Sum_probs=45.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .+|+|.|.| +|.+|+.+++.|.+.|++|++++|+.+.... +..    ..+...  + ..+.+.++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~-~~~----~g~~~~--~-~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR-LFP----SAAQVT--F-QEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH-HSB----TTSEEE--E-HHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----cCCcee--c-HHHHHhCCCEEEECCC
Confidence            457899999 7999999999999999999999886432211 111    123332  2 2345678999998763

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.75  E-value=0.00077  Score=62.25  Aligned_cols=74  Identities=23%  Similarity=0.315  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec--cccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH--DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++++|+|+|+ |.+|+.++..+...|++|++++|+...... +..... ..+..+..  +...+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhhC-ceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            44579999998 999999999999999999999987543221 111111 11222221  1223455689999998864

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.75  E-value=0.0077  Score=52.31  Aligned_cols=32  Identities=22%  Similarity=0.291  Sum_probs=27.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEec
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDN  148 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r  148 (335)
                      ++|.|.|++|.+|+.+++.+.+. +++|+.+..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d   33 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELD   33 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc
Confidence            48999999999999999999876 788886654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.73  E-value=0.00038  Score=63.99  Aligned_cols=73  Identities=15%  Similarity=0.136  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eEEEeccccch----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FELIRHDVVEP----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~----~~~~vD~Vih~A~  189 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++++.... +.+ +.... ++....|..+.    .-.++|+||+++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~-lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  244 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA-CER-LGAKRGINYRSEDFAAVIKAETGQGVDIILDMIG  244 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHH-HTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHh-cCCCEEEeCCchHHHHHHHHHhCCCceEEEECCC
Confidence            56799999999999999999999999999999986543221 111 11111 11111122111    1236999999987

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.72  E-value=0.011  Score=51.63  Aligned_cols=103  Identities=9%  Similarity=0.066  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc------------------c----ccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN------------------L----VHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~------------------~----~~~~~~~~~~~~~  170 (335)
                      .+.++|+|.|+ |.+|+++++.|++.|. ++.+++.+.-...+.                  +    ........++.+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45679999997 6699999999999998 788887653211100                  0    0011122345554


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY  234 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~  234 (335)
                      .++.+    +.+.++|+||.+..                 |...-..+-++|.+.+..+|..+....+
T Consensus       105 ~~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~~p~i~~~~~g~~  155 (251)
T 1zud_1          105 QRLTGEALKDAVARADVVLDCTD-----------------NMATRQEINAACVALNTPLITASAVGFG  155 (251)
T ss_dssp             SCCCHHHHHHHHHHCSEEEECCS-----------------SHHHHHHHHHHHHHTTCCEEEEEEEBTE
T ss_pred             ccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccc
Confidence            44432    34567999998651                 2222335667788888788887654433

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.71  E-value=0.00071  Score=61.90  Aligned_cols=71  Identities=15%  Similarity=0.149  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecc--ccch---hc--cCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD--VVEP---IL--LEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--~~~~---~~--~~vD~Vih~  187 (335)
                      .+++|+|+||+|.||...+..+...|++|++++++.+... .+.. +...  .+++.+  ..+.   ..  .++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~-~ga~--~v~~~~~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FVKS-VGAD--IVLPLEEGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHH-HTCS--EEEESSTTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHh-cCCc--EEecCchhHHHHHHHHhCCCCceEEEEC
Confidence            4679999999999999999999999999999998654332 1111 2222  122222  2111   11  269999999


Q ss_pred             cC
Q 019794          188 AC  189 (335)
Q Consensus       188 A~  189 (335)
                      +|
T Consensus       235 ~g  236 (342)
T 4eye_A          235 IG  236 (342)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.70  E-value=0.0031  Score=54.21  Aligned_cols=65  Identities=9%  Similarity=0.038  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      .++|+|.|+ |.+|+.+++.|.+.|+ |++++++++....     .. ..+.++.+|.+++      .+.++|.||.+.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~-----~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKV-----LR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH-----HH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH-----Hh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence            358999997 9999999999999999 9999876432211     11 3477888988764      256799999765

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.69  E-value=0.0048  Score=55.03  Aligned_cols=100  Identities=16%  Similarity=0.215  Sum_probs=64.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc---------------------cccccccCCCceEEEe
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK---------------------DNLVHHFRNPRFELIR  170 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~---------------------~~~~~~~~~~~~~~~~  170 (335)
                      ..+.++|+|.|+ |.+|+.+++.|++.|. ++.++|.+.-...                     +.+....+...++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            456679999995 8999999999999997 8888887642110                     0011111233455565


Q ss_pred             ccccc-----hhc-----------cCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          171 HDVVE-----PIL-----------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       171 ~D~~~-----~~~-----------~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      .++.+     ..+           .++|+||.+.                 .|...-..+-++|.+.+..+|+.+.
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~-----------------Dn~~~R~~in~~c~~~~~Pli~~gv  170 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV-----------------DNFEARMTINTACNELGQTWMESGV  170 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC-----------------SSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC-----------------cchhhhhHHHHHHHHhCCCEEEeee
Confidence            55543     121           5799999865                 2333344667788888888887654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.68  E-value=0.00084  Score=60.21  Aligned_cols=70  Identities=13%  Similarity=0.032  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc---cchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---VEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~vD~Vih~A~  189 (335)
                      .+++|+|+||+|.+|..++..+...|++|+++++++..... +. .+...  .+++.+.   ..+.+.++|+||+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~-~~ga~--~~~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PL-ALGAE--EAATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HH-HTTCS--EEEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-hcCCC--EEEECCcchhHHHHhcCceEEEE-CC
Confidence            46799999999999999999988899999999986544322 11 12211  1222211   1122368999999 86

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.66  E-value=0.0063  Score=54.11  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=42.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEE-ecCCCCC-ccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVI-DNFFTGR-KDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ++.||.|.|++|.+|+.+++.+.+. +.+++.+ ++..... .....+........+...+..++.+.++|+||.+.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT   96 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS   96 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC
Confidence            4468999999999999999998866 4576655 4432211 11111111111122222233445567899998865

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.65  E-value=0.00067  Score=61.98  Aligned_cols=73  Identities=10%  Similarity=0.075  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCC-ceEEEeccccchh---c--cCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP-RFELIRHDVVEPI---L--LEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~---~--~~vD~Vih~A  188 (335)
                      .+++|+|+||+|.||...+..+...|++|++++++.+.... +.+ +... .++....|..+..   .  .++|+||+++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~-lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  221 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE-LLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSI  221 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHH-HTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHh-CCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence            46799999999999999998888889999999987653321 221 1111 1111112222211   1  3699999998


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      |
T Consensus       222 g  222 (340)
T 3gms_A          222 G  222 (340)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.62  E-value=0.00097  Score=60.20  Aligned_cols=77  Identities=10%  Similarity=0.017  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCC--CccccccccC---CCceEEEecccc---chhccCCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG--RKDNLVHHFR---NPRFELIRHDVV---EPILLEVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~--~~~~~~~~~~---~~~~~~~~~D~~---~~~~~~vD~  183 (335)
                      ..++++++|+|+ |.+|++++..|.+.|. +|+++.|+.+.  +.+.+.+.+.   ...+..+..+..   .+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            457889999997 8999999999999998 89999987321  1111111111   112333333221   334678999


Q ss_pred             EEEccCC
Q 019794          184 IYHLACP  190 (335)
Q Consensus       184 Vih~A~~  190 (335)
                      ||++...
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9997643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.60  E-value=0.00044  Score=62.76  Aligned_cols=71  Identities=18%  Similarity=0.058  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchh---c--cCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPI---L--LEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~---~--~~vD~Vih  186 (335)
                      .+++|+|+||+|.||...+..+...|++|++++++++... .+.+ +...  ..++.   |..+..   .  .++|+||+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~-~Ga~--~~~~~~~~~~~~~~~~~~~~~g~Dvvid  215 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKA-LGAW--ETIDYSHEDVAKRVLELTDGKKCPVVYD  215 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHH-HTCS--EEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH-cCCC--EEEeCCCccHHHHHHHHhCCCCceEEEE
Confidence            4679999999999999999998889999999998644322 1111 1111  12222   222211   1  36999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      ++|
T Consensus       216 ~~g  218 (325)
T 3jyn_A          216 GVG  218 (325)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            986

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.57  E-value=0.0022  Score=57.00  Aligned_cols=65  Identities=20%  Similarity=0.284  Sum_probs=46.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +|+|.|.|+||.+|..++..|.+.|++|++++|+...... +.. .   .+..  .+ ..+.+.++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~-~---g~~~--~~-~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR-LQG-M---GIPL--TD-GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH-HHH-T---TCCC--CC-SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHh-c---CCCc--CC-HHHHhcCCCEEEEcC
Confidence            5799999999999999999999999999999886433221 111 1   1111  12 234567899999865

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.56  E-value=0.00061  Score=62.32  Aligned_cols=37  Identities=14%  Similarity=-0.021  Sum_probs=33.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|+++++++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~  202 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED  202 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            4679999999999999999999999999999988644

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.55  E-value=0.0008  Score=61.64  Aligned_cols=37  Identities=22%  Similarity=0.236  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+... |++|++++++++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~  207 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE  207 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence            4679999999999999999999998 999999988643

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.54  E-value=0.011  Score=54.45  Aligned_cols=68  Identities=22%  Similarity=0.264  Sum_probs=39.7

Q ss_pred             CeEEEEcCCchhHHHHHH-HHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccc-hhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVD-KLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-PILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~-~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~vD~Vih~A~  189 (335)
                      ++|.|.||||++|..+++ .|.++..   ++..+.......+  +.. +......+.  +..+ ..+.++|+||-+.+
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~--~~~-~~~~~~~~~--~~~~~~~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--APN-FGKDAGMLH--DAFDIESLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB--CCC-SSSCCCBCE--ETTCHHHHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcC--HHH-hCCCceEEE--ecCChhHhccCCEEEECCC
Confidence            489999999999999999 6665552   5555543221111  111 111112222  2322 34678999998875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.54  E-value=0.0013  Score=61.12  Aligned_cols=76  Identities=18%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCC-ceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP-RFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ...+++|+|+|+ |.||..+++.+...|.+|++++++...... +...+... .......+..++.+.++|+||.+++.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~-~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQ-LDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence            456889999998 999999999999999999999986543211 11111111 11111122234456789999998763

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.53  E-value=0.0084  Score=52.92  Aligned_cols=80  Identities=20%  Similarity=0.234  Sum_probs=55.6

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccccc----------------------CCC
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHF----------------------RNP  164 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~----------------------~~~  164 (335)
                      .|.....++|+|+|.|| |-+|...++.|++.|++|++++....... ..+....                      ...
T Consensus         5 lpl~~~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g   83 (274)
T 1kyq_A            5 LQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKN   83 (274)
T ss_dssp             EEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSC
T ss_pred             eeEEEEcCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccC
Confidence            45666788999999995 89999999999999999999886543110 1111111                      223


Q ss_pred             ce-EEEeccccchhcc------CCCEEEEcc
Q 019794          165 RF-ELIRHDVVEPILL------EVDQIYHLA  188 (335)
Q Consensus       165 ~~-~~~~~D~~~~~~~------~vD~Vih~A  188 (335)
                      .+ .++..+.....+.      ++|.||-+.
T Consensus        84 ~i~~~i~~~~~~~dL~~l~~~~~adlViaat  114 (274)
T 1kyq_A           84 EIYEYIRSDFKDEYLDLENENDAWYIIMTCI  114 (274)
T ss_dssp             CCSEEECSSCCGGGGCCSSTTCCEEEEEECC
T ss_pred             CeeEEEcCCCCHHHHhhcccCCCeEEEEEcC
Confidence            45 7777766666666      888888544

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.44  E-value=0.00081  Score=62.03  Aligned_cols=37  Identities=19%  Similarity=0.066  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||..++..+...|++|++++++++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~  199 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDE  199 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            4679999999999999999999899999999988643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.43  E-value=0.0053  Score=54.11  Aligned_cols=64  Identities=16%  Similarity=0.105  Sum_probs=45.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      +++++|+|+ |.+|++++..|.+.|.+|+++.|+.++..+..  .+.   +.....+.    +.++|+||++..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la--~~~---~~~~~~~~----l~~~DiVInaTp  181 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ--RLG---CDCFMEPP----KSAFDLIINATS  181 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH--HHT---CEEESSCC----SSCCSEEEECCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HCC---CeEecHHH----hccCCEEEEccc
Confidence            789999996 99999999999999999999998765433222  221   23332221    238999999754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.35  E-value=0.002  Score=59.46  Aligned_cols=72  Identities=17%  Similarity=0.171  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecc---ccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD---VVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.+|+|+|+ |.||...+..+...|++|+++++++..... +.+.+...  .+++.+   ...+...++|+||.++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~lGa~--~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE-ALKNFGAD--SFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH-HHHTSCCS--EEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCc--eEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            5779999996 999999999888899999999886543322 11111111  122221   122233579999999873

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.33  E-value=0.015  Score=53.67  Aligned_cols=69  Identities=22%  Similarity=0.212  Sum_probs=40.1

Q ss_pred             CCeEEEEcCCchhHHHHHH-HHHhCC---CeEEEEecCCCCCccccccccCCCceEEEeccccc-hhccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVD-KLIDRG---DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-PILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~-~Ll~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~vD~Vih~A~  189 (335)
                      .++|.|.||||++|..|++ .|.++.   .++..+.......+  +.. +......+.  +..+ ..+.++|+||.+.+
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~--~~~-~~~~~~~v~--~~~~~~~~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGK--APS-FAKNETTLK--DATSIDDLKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSB--CCT-TCCSCCBCE--ETTCHHHHHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCC--HHH-cCCCceEEE--eCCChhHhcCCCEEEECCC
Confidence            3589999999999999999 555555   25555543211111  111 111112222  2322 34578999998875

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.32  E-value=0.0065  Score=54.38  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      .+++|.|.||.|.||..++..|.+.|++|++++|+.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            356899999999999999999999999999998754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.32  E-value=0.0032  Score=58.25  Aligned_cols=70  Identities=17%  Similarity=0.239  Sum_probs=45.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchh--ccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPI--LLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~--~~~vD~Vih~A~  189 (335)
                      .+.+|+|+||+|.||...+..+...|.+|+++++ .. +.+.+ ..+...  .+++.   |..+..  ..++|+||.++|
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~-~~~~~-~~lGa~--~v~~~~~~~~~~~~~~~~g~D~vid~~g  257 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD-ASELV-RKLGAD--DVIDYKSGSVEEQLKSLKPFDFILDNVG  257 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GG-GHHHH-HHTTCS--EEEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hH-HHHHH-HHcCCC--EEEECCchHHHHHHhhcCCCCEEEECCC
Confidence            5679999999999999999888888999988874 22 22222 222211  12222   222211  247999999987

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=96.28  E-value=0.018  Score=54.76  Aligned_cols=76  Identities=17%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |...+.++|+|+|.|| |-+|...++.|++.|++|++++.....   .+........+.++..+..+..+.++|.||-+.
T Consensus         5 P~~~~l~~~~vlVvGg-G~va~~k~~~L~~~ga~V~vi~~~~~~---~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at   80 (457)
T 1pjq_A            5 PIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP---QFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT   80 (457)
T ss_dssp             EEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH---HHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred             eeEEECCCCEEEEECC-CHHHHHHHHHHHhCcCEEEEEcCCCCH---HHHHHHhcCCEEEEECCCCccccCCccEEEEcC
Confidence            5566778899999995 899999999999999999999864322   222222335678888887777788999998643

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.20  E-value=0.035  Score=54.69  Aligned_cols=100  Identities=12%  Similarity=0.176  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRH  171 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~  171 (335)
                      +..+|+|.|+ |++|.++++.|+..|. ++.+++.+.-...+.                      +....+...++.+..
T Consensus        16 ~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~   94 (640)
T 1y8q_B           16 AGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHD   94 (640)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEES
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEec
Confidence            4468999996 8899999999999998 888888764211110                      011112234555655


Q ss_pred             cccc-----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          172 DVVE-----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       172 D~~~-----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                      ++.+     ..+.++|+||.+.                 .|+..-..+-++|.+.++.+|..++..
T Consensus        95 ~i~~~~~~~~~~~~~DlVvda~-----------------Dn~~aR~~ln~~c~~~~iPlI~~g~~G  143 (640)
T 1y8q_B           95 SIMNPDYNVEFFRQFILVMNAL-----------------DNRAARNHVNRMCLAADVPLIESGTAG  143 (640)
T ss_dssp             CTTSTTSCHHHHTTCSEEEECC-----------------SCHHHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             ccchhhhhHhhhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence            5532     3567899999864                 234444567778888888888766544

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.20  E-value=0.0054  Score=54.47  Aligned_cols=68  Identities=19%  Similarity=0.183  Sum_probs=47.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++++|+|+ |.+|++++..|.+.|. +|+++.|+.++.. .+..     .+..+..+..+. + ++|+||++..
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~-~La~-----~~~~~~~~~l~~-l-~~DivInaTp  187 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTS-EIYG-----EFKVISYDELSN-L-KGDVIINCTP  187 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHH-HHCT-----TSEEEEHHHHTT-C-CCSEEEECSS
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHH-----hcCcccHHHHHh-c-cCCEEEECCc
Confidence            356889999996 7899999999999998 8999988654322 1221     122233332233 4 8999999764

>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}

Probab=96.16  E-value=0.024  Score=58.99  Aligned_cols=105  Identities=11%  Similarity=0.147  Sum_probs=70.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc----------------------ccccccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD----------------------NLVHHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (335)
                      .+..+|+|.|+ |++|.++++.|+..|. ++.++|.+.-...+                      .+.+..+...++.+.
T Consensus        25 L~~s~VlIvG~-GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lNP~v~v~~~~  103 (1015)
T 3cmm_A           25 MQTSNVLILGL-KGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLD  103 (1015)
T ss_dssp             HTTCEEEEECC-SHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSCTTSCEEECC
T ss_pred             HhcCEEEEECC-ChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHCCCCeEEEec
Confidence            45669999996 8899999999999998 88888765321110                      011111233566666


Q ss_pred             ccccchhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      .++..+.+.+.|+||.+..                .|...-..+.++|.+.++.+|..++...+|
T Consensus       104 ~~l~~~~l~~~DvVv~~~d----------------~~~~~r~~ln~~c~~~~iplI~~~~~G~~G  152 (1015)
T 3cmm_A          104 SLDDVTQLSQFQVVVATDT----------------VSLEDKVKINEFCHSSGIRFISSETRGLFG  152 (1015)
T ss_dssp             CCCCSTTGGGCSEEEECTT----------------SCHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred             CCCCHHHHhcCCEEEEcCC----------------CCHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            6666667788999997531                144455577788988888888877655443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.15  E-value=0.0097  Score=55.86  Aligned_cols=67  Identities=15%  Similarity=0.187  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      .++|+|.|. |.+|+.+++.|.+.|++|+++++++......     ....+.++.+|.+++.      +.++|+||-+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-----~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL-----RKFGMKVFYGDATRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-----HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-----HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence            457999996 9999999999999999999999875432211     1234667888887752      46789998765

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.11  E-value=0.0017  Score=58.69  Aligned_cols=70  Identities=19%  Similarity=0.226  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc---cchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---VEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~vD~Vih~A~  189 (335)
                      .+.+|+|+||+|.||...+..+...|++|+++++...  . .....+...  .+++.+-   ..+.+.++|+||.+.|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~-~~~~~lGa~--~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN--H-AFLKALGAE--QCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH--H-HHHHHHTCS--EEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch--H-HHHHHcCCC--EEEeCCCcchhhhhccCCCEEEECCC
Confidence            5679999999999999999988889999998875321  1 122222222  1232221   2334578999999886

>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*

Probab=96.10  E-value=0.019  Score=55.56  Aligned_cols=103  Identities=10%  Similarity=0.109  Sum_probs=67.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc----------------------cccccccCCCceEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------------------DNLVHHFRNPRFELIRH  171 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~----------------------~~~~~~~~~~~~~~~~~  171 (335)
                      +..+|+|.|+ |++|.++++.|+..|. ++.++|.+.-...                      +.+....+...++.+..
T Consensus        31 ~~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~~  109 (531)
T 1tt5_A           31 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  109 (531)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeCC
Confidence            4458999996 8899999999999998 8888876531110                      00111112234555555


Q ss_pred             ccc------chhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          172 DVV------EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       172 D~~------~~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ++.      .+.+.++|+||.+.                 .|...-..+.++|.+.++.+|..++...+|
T Consensus       110 ~~~~~~~~~~~~~~~~DvVi~~~-----------------d~~~~r~~ln~~c~~~~iplI~~~~~G~~G  162 (531)
T 1tt5_A          110 SPENLLDNDPSFFCRFTVVVATQ-----------------LPESTSLRLADVLWNSQIPLLICRTYGLVG  162 (531)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEES-----------------CCHHHHHHHHHHHHHTTCCEEEEEEETTEE
T ss_pred             CcchhhhhhHHHhcCCCEEEEeC-----------------CCHHHHHHHHHHHHHcCCCEEEEEecCCeE
Confidence            543      24567899999864                 233344466678888888888887765544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.10  E-value=0.007  Score=55.04  Aligned_cols=36  Identities=22%  Similarity=0.400  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      .+.++|+|.|+ |++|+++++.|+..|. ++++++++.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            45679999995 8999999999999998 888888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.09  E-value=0.0034  Score=57.85  Aligned_cols=70  Identities=13%  Similarity=0.105  Sum_probs=46.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC---CCCccccccccCCCceEEEec-cccchh---ccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF---TGRKDNLVHHFRNPRFELIRH-DVVEPI---LLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~-D~~~~~---~~~vD~Vih  186 (335)
                      .++++|+|+|| |.||..++..+...|++|++++++.   +.. +.+. .+.   .+.++. |+.+..   -.++|+||+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~-~~g---a~~v~~~~~~~~~~~~~~~~d~vid  252 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIE-ETK---TNYYNSSNGYDKLKDSVGKFDVIID  252 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHH-HHT---CEEEECTTCSHHHHHHHCCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHH-HhC---CceechHHHHHHHHHhCCCCCEEEE
Confidence            34789999999 9999999998888999999999875   222 1111 111   222211 222111   146999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      ++|
T Consensus       253 ~~g  255 (366)
T 2cdc_A          253 ATG  255 (366)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.09  E-value=0.022  Score=54.00  Aligned_cols=76  Identities=13%  Similarity=0.013  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccC-CCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE-VDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-vD~Vih~A~~  190 (335)
                      ..++|+|+|.|. |..|..+++.|.++|++|.+.++....... ....+....+.+..+...+..+.+ +|.||...|.
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~-~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi   82 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENP-TAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI   82 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCH-HHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCCh-HHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence            356789999998 889999999999999999999986432111 111222235566655544445566 9999998764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.08  E-value=0.0062  Score=58.02  Aligned_cols=38  Identities=26%  Similarity=0.093  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ...+|+++|||++ .||+.+++.|.+.|.+|++.++++.
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~  299 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPI  299 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4678999999975 9999999999999999999988643

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.05  E-value=0.0096  Score=52.80  Aligned_cols=36  Identities=22%  Similarity=0.197  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      .++|.|.|+ |.+|..++..|++.|++|++.+++++.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            468999985 999999999999999999999987553

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.04  E-value=0.0026  Score=58.18  Aligned_cols=69  Identities=13%  Similarity=0.079  Sum_probs=46.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchh---c--cCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPI---L--LEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~---~--~~vD~Vih~A  188 (335)
                      ++|+|+||+|.||...+..+...|++|++++++.+.... +. .+...  .+++.   |..+..   .  .++|+||+++
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~-~~Ga~--~~~~~~~~~~~~~v~~~~~~~g~D~vid~~  241 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL-LK-DIGAA--HVLNEKAPDFEATLREVMKAEQPRIFLDAV  241 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH-HH-HHTCS--EEEETTSTTHHHHHHHHHHHHCCCEEEESS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-HcCCC--EEEECCcHHHHHHHHHHhcCCCCcEEEECC
Confidence            699999999999999998888889999999986543221 21 12211  12222   222211   1  3799999998


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      |
T Consensus       242 g  242 (349)
T 3pi7_A          242 T  242 (349)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.04  E-value=0.0084  Score=53.66  Aligned_cols=71  Identities=13%  Similarity=0.074  Sum_probs=50.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ...+++|+|.|+ |.||+.+++.|...|.+|++.+|+...... +..    ..++.+..+..++.+.++|+||.+..
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~-~~~----~g~~~~~~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR-ITE----MGLVPFHTDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHH----TTCEEEEGGGHHHHSTTCSEEEECCS
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHH----CCCeEEchhhHHHHhhCCCEEEECCC
Confidence            467889999995 999999999999999999999986532111 111    12333333445567789999998764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.03  E-value=0.0045  Score=57.99  Aligned_cols=71  Identities=23%  Similarity=0.350  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++++|+..... .+...+.   .+.+..+...+.+.++|+||.+.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~-~la~~~g---~~~~~~~~l~~~l~~aDvVi~at~  236 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDLG---GEAVRFDELVDHLARSDVVVSATA  236 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHHT---CEECCGGGHHHHHHTCSEEEECCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHcC---CceecHHhHHHHhcCCCEEEEccC
Confidence            46789999997 9999999999999998 8999988643221 1111111   223333333445678999999875

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.00  E-value=0.017  Score=54.52  Aligned_cols=34  Identities=41%  Similarity=0.562  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |+|.|.| +|++|..++..|++.|++|++++++++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~   34 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSST   34 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            5799998 699999999999999999999998654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.00  E-value=0.014  Score=49.35  Aligned_cols=37  Identities=19%  Similarity=0.174  Sum_probs=30.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      ...+++|.|.| +|.+|..++..|.+.|++|++++|++
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            35567999999 69999999999999999999998754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=95.99  E-value=0.0029  Score=57.89  Aligned_cols=37  Identities=24%  Similarity=0.193  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+.+|+|+||+|.||...+..+...|++|++++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~  186 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE  186 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            5779999999999999999988889999999987543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.98  E-value=0.0025  Score=58.21  Aligned_cols=71  Identities=14%  Similarity=0.211  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh---c--cCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI---L--LEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~--~~vD~Vih~A~  189 (335)
                      .+.+|||+||+|.||...+..+...|++|+++ ++.... +.+. .+....++ ...|..+..   .  .++|+||.++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~-~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVR-DLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHH-HHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHH-HcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            46799999999999999999999999999988 543321 1122 12211122 111221111   1  36999999986

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.96  E-value=0.0086  Score=52.31  Aligned_cols=68  Identities=15%  Similarity=0.326  Sum_probs=47.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .++ +++|.|+ |.+|++++..|++.|. +|++..|+.++..+ +..     .+.....+...+.+.++|+||++..
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~-la~-----~~~~~~~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA-LDF-----PVKIFSLDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT-CCS-----SCEEEEGGGHHHHHHTCSEEEECSS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHH-----HcccCCHHHHHhhhcCCCEEEECCC
Confidence            356 8999996 9999999999999998 89999986543221 211     1122233333455778999999753

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.94  E-value=0.017  Score=50.93  Aligned_cols=69  Identities=17%  Similarity=0.140  Sum_probs=45.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eE-EEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FE-LIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|.|+ |.+|..++..|.+.|++|++++|+...... +........ +. -+..+. .+.+.++|+||-+.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v   71 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS-VNLVETDGSIFNESLTAND-PDFLATSDLLLVTL   71 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE-EEEECTTSCEEEEEEEESC-HHHHHTCSEEEECS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceee-EEEEcCCCceeeeeeeecC-ccccCCCCEEEEEe
Confidence            58999996 999999999999999999999987653322 211110111 10 011122 23567899999865

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=95.92  E-value=0.047  Score=52.12  Aligned_cols=36  Identities=22%  Similarity=0.169  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDR-GD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~-g~-~V~~~~r~~~  151 (335)
                      ..|+|.|.| +|++|..++..|++. |+ +|++++++++
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            346899998 699999999999999 99 9999999876

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=95.91  E-value=0.0071  Score=55.34  Aligned_cols=34  Identities=21%  Similarity=0.459  Sum_probs=28.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN  148 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r  148 (335)
                      .|.+|.|.||||++|..|++.|.++.. ++..+..
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S   46 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   46 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeC
Confidence            456899999999999999999998865 6666653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.89  E-value=0.005  Score=56.56  Aligned_cols=71  Identities=23%  Similarity=0.137  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec----cccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH----DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.+|+|+|+ |.||...+..+...|++|+++++++..... +.+ +...  .+++.    |..+....++|+||.++|.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~-~~~-lGa~--~v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-AMK-MGAD--HYIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHH-HTCS--EEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHH-cCCC--EEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            4679999999 999999998887889999999987554322 211 2211  12222    2222223579999999873

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.80  E-value=0.012  Score=52.44  Aligned_cols=70  Identities=19%  Similarity=0.105  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+++|+|.| .|.||+.+++.|...|.+|++.+|....... .. .   ..++.+..+..++.+.++|+|+.+.
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-~~-~---~g~~~~~~~~l~~~l~~aDvVi~~~  221 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLAR-IA-E---MGMEPFHISKAAQELRDVDVCINTI  221 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HH-H---TTSEEEEGGGHHHHTTTCSEEEECC
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HH-H---CCCeecChhhHHHHhcCCCEEEECC
Confidence            45788999999 5999999999999999999999886432111 11 1   1233343344456678999999876

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.78  E-value=0.033  Score=50.70  Aligned_cols=65  Identities=20%  Similarity=0.179  Sum_probs=48.9

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .....+|+|.|.| .|.||+.+++.|...|.+|++.+|......          .+  ...+..++.+.++|+|+.+.
T Consensus       166 ~~~l~gktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------~~--~~~~sl~ell~~aDvVil~v  230 (340)
T 4dgs_A          166 GHSPKGKRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSGV----------DW--IAHQSPVDLARDSDVLAVCV  230 (340)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTTS----------CC--EECSSHHHHHHTCSEEEECC
T ss_pred             cccccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCccccc----------Cc--eecCCHHHHHhcCCEEEEeC
Confidence            3467899999999 599999999999999999999988643210          11  12334556788999998765

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.77  E-value=0.054  Score=48.96  Aligned_cols=72  Identities=13%  Similarity=-0.051  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCchhHHH-HHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhc-cCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSH-LVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-LEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~-l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~vD~Vih~A~~  190 (335)
                      .+|+|.|.|. |.+|.. +++.|.++|++|.+.|+......   ...+....+++..+...+... .++|.||...|.
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~~V~~~D~~~~~~~---~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGFEVSGCDAKMYPPM---STQLEALGIDVYEGFDAAQLDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTCEEEEEESSCCTTH---HHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTC
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEcCCCCcHH---HHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCc
Confidence            4679999996 678884 99999999999999998643211   111222345555553333333 479999998765

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.75  E-value=0.017  Score=54.77  Aligned_cols=34  Identities=32%  Similarity=0.410  Sum_probs=31.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |+|.|.| +|++|..++..|++.|++|++++++++
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~   36 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRN   36 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence            6899998 599999999999999999999998754

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.73  E-value=0.0057  Score=58.31  Aligned_cols=67  Identities=16%  Similarity=0.384  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~  187 (335)
                      .|+|+|.|+ |-+|+.|++.|.+.|++|++++.+++... .+..   ...+..+.+|.+++.      +.++|++|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~-~~~~---~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLR-ELQD---KYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHH-HHHH---HSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHH---hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            579999996 99999999999999999999998644322 1111   235678889987762      4679998854

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=95.73  E-value=0.018  Score=49.92  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIV-IDNF  149 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~-~~r~  149 (335)
                      |+||.|+|+ |.+|+.+++.+.+.+.+++. +++.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            679999999 99999999999998777665 4443

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.70  E-value=0.014  Score=51.46  Aligned_cols=71  Identities=18%  Similarity=0.267  Sum_probs=48.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..++++|+|.|+ |.+|+.++..|.+.|++|++.+|+.+.... +...+   .++.  .+...+.+.++|+||++...
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~-l~~~~---g~~~--~~~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIK-LAQKF---PLEV--VNSPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHH-HTTTS---CEEE--CSCGGGTGGGCSEEEECSST
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHHc---CCee--ehhHHhhhcCCCEEEEeCCC
Confidence            346789999995 899999999999999999998886432221 11111   2322  22233456789999998753

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.68  E-value=0.0064  Score=55.80  Aligned_cols=71  Identities=18%  Similarity=0.134  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecc---ccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHD---VVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~vD~Vih~A~  189 (335)
                      .+.+|+|+|+ |.||...+..+...|.+|++++++++.... +.+.+....  +++.+   ...+...++|+||.++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~-~~~~lGa~~--vi~~~~~~~~~~~~~g~D~vid~~g  253 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREE-ALQDLGADD--YVIGSDQAKMSELADSLDYVIDTVP  253 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHH-HHTTSCCSC--EEETTCHHHHHHSTTTEEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHcCCce--eeccccHHHHHHhcCCCCEEEECCC
Confidence            5679999995 999999998887789999999986543322 111122111  22221   11222357999999987

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.67  E-value=0.01  Score=53.32  Aligned_cols=39  Identities=21%  Similarity=0.388  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      ..++|+|.|.| .|.+|..++..|++.|++|++.+|+++.
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            34568999998 6999999999999999999999987654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.62  E-value=0.0048  Score=58.46  Aligned_cols=37  Identities=14%  Similarity=0.168  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+++|+|+||+|.||...+..+...|.+|++++++..
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~  256 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ  256 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            5679999999999999999988889999999987543

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.60  E-value=0.0076  Score=53.84  Aligned_cols=35  Identities=31%  Similarity=0.555  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      +|+|.|.|+ |.+|..++..|.+.|++|++++|+++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            469999995 99999999999999999999988653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.56  E-value=0.0038  Score=56.87  Aligned_cols=70  Identities=14%  Similarity=-0.002  Sum_probs=45.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccch---hccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEP---ILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~---~~~~vD~Vih~A  188 (335)
                      .+++|+|+|| |.||..++..+...|++|+++++++..... +. .+...  .+++.   |+.+.   ...++|+||+++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~-~lGa~--~~~d~~~~~~~~~~~~~~~~~d~vid~~  238 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AK-ELGAD--LVVNPLKEDAAKFMKEKVGGVHAAVVTA  238 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HH-HTTCS--EEECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH-HCCCC--EEecCCCccHHHHHHHHhCCCCEEEECC
Confidence            4679999999 779999999998899999999876443221 11 11111  12221   21111   115799999998


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      |
T Consensus       239 g  239 (339)
T 1rjw_A          239 V  239 (339)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.55  E-value=0.018  Score=54.60  Aligned_cols=91  Identities=21%  Similarity=0.302  Sum_probs=56.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-C---eEEEEecCCCCCccccccccCCCceEEEeccc------cchhccCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG-D---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPILLEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~------~~~~~~~vD~Vih  186 (335)
                      ++|+|.| .|.||+.++..|+++. .   +|++++......  .+..... .++.....|.      .++.+.+.|+|||
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~--~~~~~~g-~~~~~~~Vdadnv~~~l~aLl~~~DvVIN   89 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV--DVAQQYG-VSFKLQQITPQNYLEVIGSTLEENDFLID   89 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC--CHHHHHT-CEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh--hHHhhcC-CceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence            3799999 6999999999999875 3   688776543332  2221111 2233222222      2234555699998


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                      ++-+.                  ....++++|.+.|+.++-++
T Consensus        90 ~s~~~------------------~~l~Im~acleaGv~YlDTa  114 (480)
T 2ph5_A           90 VSIGI------------------SSLALIILCNQKGALYINAA  114 (480)
T ss_dssp             CCSSS------------------CHHHHHHHHHHHTCEEEESS
T ss_pred             CCccc------------------cCHHHHHHHHHcCCCEEECC
Confidence            55211                  12378999999987766555

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.54  E-value=0.015  Score=56.83  Aligned_cols=36  Identities=22%  Similarity=0.400  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      .+.++|+|.|+ |++|.++++.|+..|. ++.++|.+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            46789999996 8999999999999998 888888764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.53  E-value=0.0095  Score=52.84  Aligned_cols=64  Identities=13%  Similarity=0.156  Sum_probs=43.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|.| .|.+|..++..|++.|++|++.+|+++........     .+  ...+...+.+.++|+||-+.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~--~~~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-----GA--ERAATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-----TC--EECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-----CC--eecCCHHHHHhcCCEEEEEc
Confidence            6899998 59999999999999999999999875543221111     11  12223334556678887654

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.47  E-value=0.12  Score=48.57  Aligned_cols=73  Identities=18%  Similarity=0.145  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc----------------------cccccCCCceEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN----------------------LVHHFRNPRFELIRH  171 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~  171 (335)
                      +..+|+|.|+ |++|+++++.|+..|. ++.++|.+.-...+.                      +....+...++.+..
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~  117 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  117 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence            4568999996 8899999999999998 888887653211110                      011112234556655


Q ss_pred             cccc---hhccCCCEEEEcc
Q 019794          172 DVVE---PILLEVDQIYHLA  188 (335)
Q Consensus       172 D~~~---~~~~~vD~Vih~A  188 (335)
                      ++.+   +.+.++|+||.+.
T Consensus       118 ~i~~~~~~~~~~~DlVi~~~  137 (434)
T 1tt5_B          118 KIQDFNDTFYRQFHIIVCGL  137 (434)
T ss_dssp             CGGGBCHHHHTTCSEEEECC
T ss_pred             ccchhhHHHhcCCCEEEECC
Confidence            5433   4567899999865

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.46  E-value=0.031  Score=49.36  Aligned_cols=57  Identities=19%  Similarity=0.153  Sum_probs=45.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+|++++|.|+++-+|+.++..|++.|+.|+++.+..                     ....+.+..+|+||...|.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------------------~~L~~~~~~ADIVI~Avg~  213 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------------------KDLSLYTRQADLIIVAAGC  213 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------------SCHHHHHTTCSEEEECSSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHhhcCCEEEECCCC
Confidence            46899999999999999999999999999999886521                     1123456788999987763

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.45  E-value=0.039  Score=49.95  Aligned_cols=68  Identities=16%  Similarity=0.173  Sum_probs=50.6

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .....+++|.|.| .|.||+.+++.|...|.+|++.+|+...... .        ......+..++.+.++|+|+.+.
T Consensus       132 ~~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~--------~~~~~~~~l~ell~~aDvV~l~l  199 (324)
T 3evt_A          132 TSTLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADH-F--------HETVAFTATADALATANFIVNAL  199 (324)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-C--------SEEEEGGGCHHHHHHCSEEEECC
T ss_pred             CccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHh-H--------hhccccCCHHHHHhhCCEEEEcC
Confidence            3457889999999 6999999999999999999999986543211 1        11233445566788899998765

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.45  E-value=0.0058  Score=55.69  Aligned_cols=36  Identities=19%  Similarity=0.230  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+.+|+|+|| |.||...+..+...|+ +|++++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~  200 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPY  200 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            5679999999 9999999988888999 9999987643

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.42  E-value=0.027  Score=50.70  Aligned_cols=79  Identities=15%  Similarity=0.142  Sum_probs=51.6

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEE--Ee-c--cccchhccCCCEEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFEL--IR-H--DVVEPILLEVDQIY  185 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~-~--D~~~~~~~~vD~Vi  185 (335)
                      .....+++++|.|++.-+|+.+++.|+..|.+|++++|+.....+.... +.......  +. .  +-..+.+.++|+||
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~-la~~~~~~t~~~~t~~~~L~e~l~~ADIVI  250 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGES-LKLNKHHVEDLGEYSEDLLKKCSLDSDVVI  250 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCC-SSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHH-HhhhcccccccccccHhHHHHHhccCCEEE
Confidence            3367889999999888889999999999999999998753221111111 11111111  11 1  33445678899999


Q ss_pred             EccCC
Q 019794          186 HLACP  190 (335)
Q Consensus       186 h~A~~  190 (335)
                      .+.+.
T Consensus       251 sAtg~  255 (320)
T 1edz_A          251 TGVPS  255 (320)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            88764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.41  E-value=0.0039  Score=57.02  Aligned_cols=36  Identities=22%  Similarity=0.199  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+.+|+|+|+ |.||...+..+...|+ +|+++++++.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~  203 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDF  203 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            5679999999 9999999998888999 9999988643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.35  E-value=0.0071  Score=53.66  Aligned_cols=37  Identities=19%  Similarity=0.216  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      ||+|.|.| .|.+|..++..|++.|++|++.+|+++..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKC   37 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGG
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            46899998 79999999999999999999999876543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.34  E-value=0.029  Score=50.55  Aligned_cols=69  Identities=12%  Similarity=0.082  Sum_probs=46.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccch-hccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-ILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~vD~Vih~A  188 (335)
                      ...++|.|.| .|.||..++..|.+.|+  +|++.+|+++.......    ...++....|. ++ .+.++|+||-+.
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~~~~~~~-~~~~~~~aDvVilav  102 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIIDEGTTSI-AKVEDFSPDFVMLSS  102 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCSEEESCT-TGGGGGCCSEEEECS
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcchhcCCH-HHHhhccCCEEEEeC
Confidence            3457999999 79999999999999999  99999886543222111    11111112222 34 578899999865

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.33  E-value=0.034  Score=49.68  Aligned_cols=65  Identities=12%  Similarity=0.154  Sum_probs=40.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .+||-+.| .|.+|..+++.|++.|++|++.+|+++.......     ...  ..++...+...++|+||-+-
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-----~G~--~~~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK-----LGA--TVVENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT-----TTC--EECSSGGGGCCTTCEEEECC
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----cCC--eEeCCHHHHHhcCCceeeec
Confidence            35899998 7999999999999999999999987654433221     111  22334445566788887654

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.32  E-value=0.13  Score=40.19  Aligned_cols=86  Identities=20%  Similarity=0.255  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGA---GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGat---G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ++.++|.|.|++   |.+|..+++.|++.|++|+.+....    +..      ..+.  ..+..++....+|+++-+.. 
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~----~~i------~G~~--~~~s~~el~~~vDlvii~vp-   78 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY----DEI------EGLK--CYRSVRELPKDVDVIVFVVP-   78 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC----SEE------TTEE--CBSSGGGSCTTCCEEEECSC-
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC----CeE------CCee--ecCCHHHhCCCCCEEEEEeC-
Confidence            455689999997   8999999999999999977765431    111      1111  11222233457899987541 


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iS  229 (335)
                                       -.....+++.|.+.|++.+.+.
T Consensus        79 -----------------~~~v~~v~~~~~~~g~~~i~~~  100 (138)
T 1y81_A           79 -----------------PKVGLQVAKEAVEAGFKKLWFQ  100 (138)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred             -----------------HHHHHHHHHHHHHcCCCEEEEc
Confidence                             1233456666777777544443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.32  E-value=0.01  Score=53.67  Aligned_cols=67  Identities=13%  Similarity=0.140  Sum_probs=46.1

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .++|+|.|.| .|.+|..++..|++.|++|++.+|+++.......     ..+.  ..+..++.+.++|+||-+.
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----~g~~--~~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----LGAT--IHEQARAAARDADIVVSML   95 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----TTCE--EESSHHHHHTTCSEEEECC
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----CCCE--eeCCHHHHHhcCCEEEEEC
Confidence            3567999998 5999999999999999999999886543222111     1121  1233344567889888765

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.30  E-value=0.0093  Score=50.79  Aligned_cols=67  Identities=15%  Similarity=0.123  Sum_probs=44.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEE-EecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIV-IDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ++|+|.|.| +|.+|..++..|.+.|++|++ .+|+++.... +.....   +.... +. .+.+.++|+||-+.
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~-l~~~~g---~~~~~-~~-~~~~~~aDvVilav   89 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSS-VTDRFG---ASVKA-VE-LKDALQADVVILAV   89 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHH-HHHHHT---TTEEE-CC-HHHHTTSSEEEEES
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHH-HHHHhC---CCccc-Ch-HHHHhcCCEEEEeC
Confidence            467999999 799999999999999999998 7665443222 111111   11111 21 23467899998765

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=95.27  E-value=0.17  Score=44.81  Aligned_cols=89  Identities=17%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACPAS  192 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~~~  192 (335)
                      +.++|+|.|++|..|+.+++.|.+.|++++.-... ......   .   ..+.++  +..++...  ++|++|-+.-   
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP-~~~g~~---i---~G~~vy--~sl~el~~~~~~Dv~Ii~vp---   73 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTP-GKGGME---V---LGVPVY--DTVKEAVAHHEVDASIIFVP---   73 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT-TCTTCE---E---TTEEEE--SSHHHHHHHSCCSEEEECCC---
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECC-CCCCce---E---CCEEee--CCHHHHhhcCCCCEEEEecC---
Confidence            45689999999999999999999999985533322 111011   0   112222  11223334  7999986541   


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCe-EEEEec
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTST  230 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-~v~iSS  230 (335)
                                     -..+..+++.|.+.|++ +|.+++
T Consensus        74 ---------------~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           74 ---------------APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             ---------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence                           23355788888889987 555554

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.25  E-value=0.025  Score=51.56  Aligned_cols=68  Identities=21%  Similarity=0.163  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .+.+|+|+|+ |.||...+..+...|.+|++++++++... .+ ..+....  ++ .|. +....++|+||.+.|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~-~~lGa~~--v~-~~~-~~~~~~~D~vid~~g  243 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DA-LSMGVKH--FY-TDP-KQCKEELDFIISTIP  243 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HH-HHTTCSE--EE-SSG-GGCCSCEEEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HH-HhcCCCe--ec-CCH-HHHhcCCCEEEECCC
Confidence            4679999997 99999999888888999999988755432 12 2222222  22 221 222238999999886

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.22  E-value=0.016  Score=51.87  Aligned_cols=36  Identities=14%  Similarity=0.099  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++|+|.|.| .|.+|..++..|++.|++|++.+|+++
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~   41 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQ   41 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            346899997 699999999999999999999988754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.19  E-value=0.011  Score=54.58  Aligned_cols=71  Identities=17%  Similarity=0.160  Sum_probs=46.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.+|||+|+ |.||...+..+...|++|++++++++.... +.+ +...  .+++.   |..+....++|+||.++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a~~-lGa~--~vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKA-LGAD--EVVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHH-HTCS--EEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH-cCCc--EEeccccHHHHHHhhcCCCEEEECCCC
Confidence            4679999997 889999998888889999999886543321 111 2211  12222   2122223579999999873

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.17  E-value=0.036  Score=49.35  Aligned_cols=58  Identities=17%  Similarity=0.150  Sum_probs=46.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecccc-chhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~vD~Vih~A~~  190 (335)
                      ..+|++++|.|+++-+|+.++..|++.|++|+++.+...                    |+. .+.+..+|+||...+.
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~Avg~  220 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAAMGQ  220 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEECSCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------------CchhhhhhccCCEEEECCCC
Confidence            468999999999999999999999999999999865211                    111 2457889999988763

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.15  E-value=0.027  Score=50.11  Aligned_cols=64  Identities=11%  Similarity=-0.011  Sum_probs=48.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ....+|+|.|.| .|.||+.+++.|...|.+|++.+|+......          ++  ..+..++.+.++|+|+.+.
T Consensus       118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----------~~--~~~~l~ell~~aDiV~l~~  181 (290)
T 3gvx_A          118 TLLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV----------DV--ISESPADLFRQSDFVLIAI  181 (290)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC----------SE--ECSSHHHHHHHCSEEEECC
T ss_pred             eeeecchheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc----------cc--ccCChHHHhhccCeEEEEe
Confidence            346789999999 6999999999999999999999886543211          11  2334456778899998765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.14  E-value=0.018  Score=53.02  Aligned_cols=71  Identities=14%  Similarity=0.083  Sum_probs=45.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEe---ccccchh----ccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIR---HDVVEPI----LLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~D~~~~~----~~~vD~Vih  186 (335)
                      ..+.+|+|+||+|.||...+..+...|++|+++. +++ +.+ ....+...  .+++   .|..+..    -.++|+||.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~-~~~-~~~~lGa~--~vi~~~~~~~~~~v~~~t~g~~d~v~d  237 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH-NFD-LAKSRGAE--EVFDYRAPNLAQTIRTYTKNNLRYALD  237 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG-GHH-HHHHTTCS--EEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH-HHH-HHHHcCCc--EEEECCCchHHHHHHHHccCCccEEEE
Confidence            4577999999999999999988888999998886 322 222 22222221  2232   2222211    135999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +.|
T Consensus       238 ~~g  240 (371)
T 3gqv_A          238 CIT  240 (371)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	9e-92
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-63
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-59
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-57
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-49
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-48
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-47
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-46
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-44
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-41
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-40
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-39
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-35
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-34
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-32
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-22
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-19
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-17
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-15
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-15
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-14
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	7e-14
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	8e-14
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-13
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	7e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-09
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-09
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-05
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	3e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  274 bits (701), Expect = 9e-92
 Identities = 153/218 (70%), Positives = 181/218 (83%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           RI++TGGAGFVGSHL DKL+  G EV V+DNFFTGRK N+ H   +  FELI HDVVEP+
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP
Sbjct: 63  YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 122

Query: 238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 123 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 182

Query: 298 DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 183 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 220

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  203 bits (518), Expect = 1e-63
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 26/242 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVE 175
           +I++TGGAGF+GS +V  +I    + +V ID   + G  ++L     + R+     D+ +
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 176 PILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----- 223
              +         D + HLA  +        P   I+TN++GT  +L +A++  +     
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 224 -----KFLLTSTSEVYGDPLEHPQKET-----YWGNVNPIGERSCYDEGKRTAETLTMDY 273
                +F   ST EVYGD     + E       +         S Y   K +++ L   +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 274 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
            R  G+   +    N YGP    +  +++   +  A+  +P+ +YG G Q R + YV D 
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239

Query: 334 VH 335
             
Sbjct: 240 AR 241

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  190 bits (483), Expect = 8e-59
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 20/231 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRG------DEVIVIDNF-FTGRKDNLVHHFRNPRFELIR 170
           R++VTGGAGF+GSH V +L+         DEVIV+D+  + G + NL     +PR   + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDVVEPILLEV-----DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AK 224
            D+ +  LL       D I H A  +             +TNV GT  +L  A   G  +
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 225 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
            +  ST++VYG        E+     +P+   S Y   K  ++ +   YHR  G++VRI 
Sbjct: 122 VVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 285 RIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           R  N YGP       +++  FV   +    + +YGDG   R + +  D   
Sbjct: 177 RCCNNYGPYQ--HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  187 bits (475), Expect = 2e-57
 Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 24/237 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVH--HFRNPRFELIRH 171
             ++TG  G  GS+L + L+++G EV  I      F T R D++    H  NP+F L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 172 DVVEPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-- 222
           D+ +   L         D++Y+L   +       +P  T   + MGTL +L   + +G  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 223 --AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE 280
              +F   STSE+YG   E PQKET      P   RS Y   K  A  +T++Y    G+ 
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMY 177

Query: 281 VRIARIFNTYGPRM--CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
                +FN   PR        ++       A   +     G+    R + +  D V 
Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  165 bits (419), Expect = 2e-49
 Identities = 50/227 (22%), Positives = 77/227 (33%), Gaps = 21/227 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R+ + G  G VGS +  +L  RGD  +V+       +D L         +    +     
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-----RDELNLLDSRAVHDFFASE----- 53

Query: 178 LLEVDQIYHLACPASP-VHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVYG 235
              +DQ+Y  A      V     P   I  N+M   N++  A +    K L   +S +Y 
Sbjct: 54  --RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 111

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              + P  E+             Y   K     L   Y+R  G + R     N YGP   
Sbjct: 112 KLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN 171

Query: 296 LDDGR-------VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
                       +     A A +   + V+G G   R F +V D+  
Sbjct: 172 FHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (412), Expect = 4e-48
 Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 25/235 (10%)

Query: 121 VTGGAGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVHHFR---NPRFELIRHDV 173
           +TG  G  GS+L + L+++G EV  I      F TGR ++L  + +       +L   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 174 VEPIL-------LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---- 222
            +          ++  +IY+L   +           T   + +GTL +L   K  G    
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 223 AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVR 282
            KF   STSE+YG   E PQKET      P   RS Y   K  A  + +++     +   
Sbjct: 126 VKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 180

Query: 283 IARIFNTYGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
              +FN   PR   +    ++  +     + +      G+    R + +  D V 
Sbjct: 181 NGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  161 bits (407), Expect = 2e-47
 Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 19/232 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRH 171
             ++TG AGF+GS+L++ L+    +V+ +DNF TG + NL      V   +   F+ I+ 
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 172 DVVEPILL-----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKF 225
           D+            VD + H A   S      +P+ +  TN+ G LNML  A+      F
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 137

Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
              ++S  YGD    P+ E   G        S Y   K   E     + R  G      R
Sbjct: 138 TYAASSSTYGDHPGLPKVEDTIGK-----PLSPYAVTKYVNELYADVFSRCYGFSTIGLR 192

Query: 286 IFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
            FN +G R   +     V+  + +  I+   + + GDG+ +R F Y+ + V 
Sbjct: 193 YFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 244

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  157 bits (398), Expect = 4e-46
 Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 16/229 (6%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDE--VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE 175
            I+VTGGAGF+GS+ V  + +   +  V V+D          +      R EL+  D+ +
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 176 PILLE-----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
             L++      D I H A  +   +   +P   I TN +GT  +L  A++   +F   ST
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 231 SEVYGD-PLEHPQKETYWGNVNPIGE------RSCYDEGKRTAETLTMDYHRGAGVEVRI 283
            EVYGD PL         G              S Y   K  ++ +   + R  GV+  I
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATI 183

Query: 284 ARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
           +   N YGP   ++  + +   +   +      +YG+GK  R + + +D
Sbjct: 184 SNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND 230

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  152 bits (385), Expect = 3e-44
 Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 30/244 (12%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G +VI++DN    ++  L  +          +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLL 227
             L+        +D + H A   +       P++    NV GTL ++   +    K F+ 
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMD-YHRGAGVEVRIARI 286
           +S++ VYGD  + P  E++         +S Y + K   E +  D         + + R 
Sbjct: 122 SSSATVYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177

Query: 287 FNTYGPRMCLDDG-------RVVSNFVAQAI--RRQPMTVYG------DGKQTRSFQYVS 331
           FN  G     D G         +  ++AQ    RR  + ++G      DG   R + +V 
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237

Query: 332 DLVH 335
           DL  
Sbjct: 238 DLAD 241

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  146 bits (368), Expect = 1e-41
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 22/238 (9%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH--HFRNPRFELIRHDVVEP 176
           ++VTGGAG++GSH V +LI+ G + +V DN      D++                D+ + 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLT 228
             LE       +D + H A   +       P++    N++GT+ +L L ++     F+ +
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARI 286
           S++ VYGD    P          P+G  + Y   K   E +  D +       +  I R 
Sbjct: 124 SSATVYGDATRFPNMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 287 FNTYGPRMCLDDG--------RVVSNFVAQAI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
           FN  G       G         ++      A+ RR+ + ++GD   +R    + D +H
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  141 bits (355), Expect = 4e-40
 Identities = 44/230 (19%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDVVEP 176
             +VTG  G  G++L   L+++G  V  +     +  +  L         +    D+ + 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 177 ILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLL 227
             +       +  ++Y+LA  +        PV T   + +G  ++L   ++     +F  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            STSE++G      Q E       P   RS Y   K     +T++Y    G+      +F
Sbjct: 122 ASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

Query: 288 NTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           N   P   ++    +V        + +Q     G+    R + +  D V 
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE 226

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  138 bits (348), Expect = 7e-39
 Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 27/245 (11%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF-TGRKDNLVHHFRNPRFELIRHDVVEP 176
           ++++TGG GF+GS+L    + +G ++IV DN    G  DNL        FE +  D+   
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 177 ILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA--KRVGAKFLL 227
             +         D  +HLA   +      NP    + NV GTLN+L            + 
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 228 TSTSEVYGDPLEHPQKETYWGNVN-----------PIGERSCYDEGKRTAETLTMDYHRG 276
           +ST++VYGD  ++   ET                  +   S Y   K  A+   +DY R 
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181

Query: 277 AGVEVRIARIFNTYGPRMCLDDGRVVSNFV------AQAIRRQPMTVYGDGKQTRSFQYV 330
            G+   + R  + YG R      +    +        +    +P T+ G+GKQ R   + 
Sbjct: 182 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241

Query: 331 SDLVH 335
            D++ 
Sbjct: 242 EDMIS 246

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  130 bits (328), Expect = 1e-35
 Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 13/228 (5%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I +TG  GF+ SH+  +L   G  VI  D     + +++        F L+   V+E  
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIASDWK---KNEHMTEDMFCDEFHLVDLRVMENC 73

Query: 178 LLEVDQIYHLACPASP----VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK---FLLTST 230
           L   + + H+   A+        + N    +  N M + NM+  A+  G K   +  ++ 
Sbjct: 74  LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSAC 133

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
                  LE         +  P   +  +   K   E L   Y++  G+E RI R  N Y
Sbjct: 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIY 193

Query: 291 GPR---MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           GP        +    +             ++GDG QTRSF ++ + V 
Sbjct: 194 GPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 241

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  127 bits (318), Expect = 1e-34
 Identities = 49/239 (20%), Positives = 83/239 (34%), Gaps = 26/239 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLV---HHFRNPRFELIR 170
             ++TG  G  GS+L + L+ +G EV  +      F T R +++    H+      +L  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 171 HDVVEPILLE-------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA 223
            D+ +   L         D++Y+LA  +        P  T      G L +L   +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 224 KF-----LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
                     + S         PQ ET      P   RS Y   K  A   T++Y    G
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYG 177

Query: 279 VEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           +      +FN   PR   +    ++        +  Q     G+ + +R + +  D V 
Sbjct: 178 LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (300), Expect = 5e-32
 Identities = 58/249 (23%), Positives = 95/249 (38%), Gaps = 34/249 (13%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--------VHHFRNPRFELI 169
           +++VTGGAG++GSH V +L++ G   +VIDNF    +           V        E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPILLEVDQ-------IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 223 AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY-HRGAGVEV 281
            K L+ S+S        +PQ           G  + Y + K   E +  D          
Sbjct: 124 VKNLVFSSSATVYG---NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180

Query: 282 RIARIFNTYGPRMCLDDG-------RVVSNFVAQAI--RRQPMTVYG------DGKQTRS 326
            + R FN  G       G         +  +V+Q    RR+ + V+G      DG   R 
Sbjct: 181 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240

Query: 327 FQYVSDLVH 335
           + +V DL  
Sbjct: 241 YIHVVDLAK 249

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 94.1 bits (232), Expect = 3e-22
 Identities = 53/276 (19%), Positives = 92/276 (33%), Gaps = 59/276 (21%)

Query: 118 RIVVTGGAGFVGSHLVDKLI-DRGDEVIVIDNFFTG------------------RKDNLV 158
           R++V GGAG++GSH V  L+ D    V+++D+                      + D   
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 159 HHFRNPRFELIRHDVVEPILLE--------VDQIYHLACPASPVHYKYNPVKTIKTNVMG 210
             + +    L   DV     L         +D + H+    +      +P+K    NV+G
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 211 TLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE---RSCYDEGKRTAE 267
            L +L          ++ S+S             T    ++   +    S Y E K  AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG-------RVVSNFVAQAIR--------- 311
            +  D     G++    R FN  G     D G        ++   + + +          
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLT 243

Query: 312 -------RQPMTVYG------DGKQTRSFQYVSDLV 334
                   + M ++G      DG   R + +V DL 
Sbjct: 244 IHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLA 279

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 84.2 bits (206), Expect = 5e-19
 Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 19/227 (8%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV--- 173
           R+++ G  GF+G+HL ++L+     EV  +D         L     +P F  +  D+   
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----NHPHFHFVEGDISIH 57

Query: 174 ---VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   + +  ST
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117

Query: 231 SEVYGDPLEHPQKETYWGNVNPIGE--RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           SEVYG   +    E +   +       R  Y   K+  + +   Y    G++  + R FN
Sbjct: 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 177

Query: 289 TYG------PRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQY 329
             G          +   R ++  +   +   P+ +   GKQ R F  
Sbjct: 178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 224

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 78.4 bits (191), Expect = 7e-17
 Identities = 40/215 (18%), Positives = 68/215 (31%), Gaps = 15/215 (6%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R+ VTG  GF G  L   L   G  V                       +    D+ +  
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 178 LLEVDQ-------IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK----FL 226
            L           ++H+A           PV+T  TNVMGT+ +L   + VG       +
Sbjct: 70  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129

Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM---DYHRGAGVEVRI 283
            +       + +   ++    G  +P        E   ++   +      +   G  V  
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189

Query: 284 ARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVY 318
            R  N  G      D R+V + +    + QP+ + 
Sbjct: 190 VRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIR 223

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 73.7 bits (179), Expect = 2e-15
 Identities = 29/221 (13%), Positives = 62/221 (28%), Gaps = 27/221 (12%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG---RKDNLVHHFRNPRFELIRHDVV 174
           R+++ GG G++G  +V+  I  G    V+          K  ++ +F+    +LI   + 
Sbjct: 5   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64

Query: 175 EPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVY 234
           +   L           ++      +     +  +     +  + +    K  L S   + 
Sbjct: 65  DHQRLVDALKQVDVVISALAGGVLSHHILEQLKL-----VEAIKEAGNIKRFLPSEFGMD 119

Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
            D +EH  +                       +         A +           G   
Sbjct: 120 PDIMEHALQPGSI---------------TFIDKRKVRRAIEAASIPYTYVSSNMFAGYF- 163

Query: 295 CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
               G +          R  + +YGDG     +    D+  
Sbjct: 164 ---AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT 201

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 73.3 bits (178), Expect = 3e-15
 Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 26/243 (10%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP----RFELIRHDV 173
            ++VTG  GFV SH+V++L++ G +V         +  NL   +           +  D+
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 174 VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231
           ++    +  +     +A  AS V +     + +   + GTLN L  A    +      TS
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 232 EVYGDPLEHPQKETYWGNV-----------------NPIGERSCYDEGKRTAETL--TMD 272
                 +  P  E  + +                  +P      Y   K  AE       
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 273 YHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
                   +       T G     +     ++    ++    ++        + +    D
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD 251

Query: 333 LVH 335
           +  
Sbjct: 252 IGL 254

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (167), Expect = 2e-14
 Identities = 19/148 (12%), Positives = 49/148 (33%), Gaps = 8/148 (5%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I + G  G  G   + + +  G EV V+    +               ++++   V+  
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD 236
           +   D +  L    + +               G  N++   K  G    +  +++ +  D
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVACTSAFLLWD 117

Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKR 264
           P + P +     + +    +   + G +
Sbjct: 118 PTKVPPRLQAVTDDHIRMHKVLRESGLK 145

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 68.9 bits (166), Expect = 7e-14
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 119 IVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           I+VTGGAGF+GS++V  L D+G  +++V+DN   G K   +    N    + + D +  I
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 178 LLEVDQIYHLACPASPVHYKYNP 200
           +   +     A            
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTE 83

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 69.6 bits (168), Expect = 8e-14
 Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 18/81 (22%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------------------VH 159
           R++V GG G+ G      L  +  EV ++DN      D+                     
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 160 HFRNPRFELIRHDVVEPILLE 180
                  EL   D+ +   L 
Sbjct: 63  ALTGKSIELYVGDICDFEFLA 83

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 68.3 bits (165), Expect = 1e-13
 Identities = 27/222 (12%), Positives = 59/222 (26%), Gaps = 34/222 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG----RKDNLVHHFRNPRFELIRHDV 173
           RI++ G  G++G H+    +D G    ++    T      K  L+  F+     ++    
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS- 63

Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV 233
                  +D    L      V    + V +++      +           +F  +     
Sbjct: 64  -------IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116

Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
             +       ++ +     +                        G+           G  
Sbjct: 117 VDNVHAVEPAKSVFEVKAKV-----------------RRAIEAEGIPYTYVSSNCFAGYF 159

Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
           +     R ++     A  R  + + GDG     F    D+  
Sbjct: 160 L-----RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT 196

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 62.5 bits (150), Expect = 7e-12
 Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 31/205 (15%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           +I++TG  G +G  +  +L  +  EVI  D      +D           ++     V   
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTD-----VQD----------LDITNVLAVNKF 47

Query: 178 LLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235
             E   + + + A   +    +       K N +G  N+   A  VGA+ +  ST  V+ 
Sbjct: 48  FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFD 107

Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              + P  E    N      ++  +            + +    +  I R    YG    
Sbjct: 108 GEAKEPITEFDEVNPQSAYGKTKLEGEN---------FVKALNPKYYIVRTAWLYGDGNN 158

Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGD 320
                     +        + V  D
Sbjct: 159 FVK-----TMINLGKTHDELKVVHD 178

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 60.6 bits (145), Expect = 3e-11
 Identities = 22/201 (10%), Positives = 55/201 (27%), Gaps = 2/201 (0%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP 176
            ++VTG +G  G  +  KL +  D+ +      + +  + +         ++   D + P
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 64

Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236
               +D +  L      +   ++P K  +   +              +      ++V G 
Sbjct: 65  AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 124

Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL 296
                       N +        +      +     Y   +G    I R          +
Sbjct: 125 KHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV 183

Query: 297 DDGRVVSNFVAQAIRRQPMTV 317
            +  V  +        + +  
Sbjct: 184 RELLVGKDDELLQTDTKTVPR 204

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 55.4 bits (132), Expect = 3e-09
 Identities = 22/209 (10%), Positives = 44/209 (21%), Gaps = 9/209 (4%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
            I V G  G  G+ L+      G  V    +  + +          P   L +  +    
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVH--SLKGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 174 --VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231
             ++ +       +      +                 GT+     +            +
Sbjct: 63  PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPA 122

Query: 232 EVYGDPLEHPQKETYWGNVNPIGER-SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
                P    +       +         Y+    +                     F+  
Sbjct: 123 VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPD 182

Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYG 319
            P   LD    V   + Q  +  P    G
Sbjct: 183 IPLPWLDAEHDVGPALLQIFKDGPQKWNG 211

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 54.6 bits (129), Expect = 4e-09
 Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 14/144 (9%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
            I++ G  G VG  L   L   G  +I +D        +      NP         V   
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKEFCGDF----SNP-------KGVAET 49

Query: 178 LLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG 235
           + ++  D I + A   +    +  P      N      +   A   GA  +  ST  V+ 
Sbjct: 50  VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109

Query: 236 DPLEHPQKETYWGNVNPIGERSCY 259
              + P +ET   +   +  ++  
Sbjct: 110 GTGDIPWQETDATSPLNVYGKTKL 133

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.8 bits (112), Expect = 3e-07
 Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 4/92 (4%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI 177
           R+++ G  G  G HL+D+++       VI       +  L  H R         +++  +
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVI----APARKALAEHPRLDNPVGPLAELLPQL 59

Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVM 209
              +D  +                + +  ++ 
Sbjct: 60  DGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLP 91

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 6/29 (20%), Positives = 15/29 (51%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVI 146
            + + G +G  G  L+ +++++G    V 
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVT 44

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 12/112 (10%), Positives = 27/112 (24%), Gaps = 5/112 (4%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---- 173
           + VV  G G VG      L   G EV++        +       +  +  +   +     
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA 84

Query: 174 -VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK 224
                +     ++        +  +          ++   N        G  
Sbjct: 85  SRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGID 136

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 120 VVTGGAGFVGSHLVDKLIDRGDEVIVID-NFFTGRKDNLVHHFRNPRFELIRHDVVEPIL 178
           V+  G+GFV    +D L D G +V V      + +K +       P    +  D      
Sbjct: 5   VLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE 64

Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNV 208
           +    +     P +            K +V
Sbjct: 65  VAKHDLVISLIPYTFHATVIKSAIRQKKHV 94

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVID 147
           +++V GG G +GS +++     G  V+ ID
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNID 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.98
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.98
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.98
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.96
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.95
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.92
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.91
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.9
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.88
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.86
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.85
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.85
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.84
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.84
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.84
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.84
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.84
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.84
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.84
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.84
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.84
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.84
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.83
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.83
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.83
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.83
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.83
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.83
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.83
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.83
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.82
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.82
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.82
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.82
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.81
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.81
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.81
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.81
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.8
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.8
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.8
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.8
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.8
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.8
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.8
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.8
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.8
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.79
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.79
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.78
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.78
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.78
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.78
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.77
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.77
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.76
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.76
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.74
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.74
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.73
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.73
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.73
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.72
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.71
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.7
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.66
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.66
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.6
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.57
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.57
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.57
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.56
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.53
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.51
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.45
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.21
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.28
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.26
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.25
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.17
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.16
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.13
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.04
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.0
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.0
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.95
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.95
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.95
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.92
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.9
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.89
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.85
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.84
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.83
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.83
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.77
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.75
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.75
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.75
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.68
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.66
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.65
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.55
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.53
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.45
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.41
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.26
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.25
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.17
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.14
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.11
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.08
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.08
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.06
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.01
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.91
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.91
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.87
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.86
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.8
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.74
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.7
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.62
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.6
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.6
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.59
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.49
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.4
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.36
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.26
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.25
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.21
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.18
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.11
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.1
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.09
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.09
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.09
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.84
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.81
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.81
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.73
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.71
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.69
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	95.62
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.58
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.58
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.54
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.5
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.49
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.49
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.42
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.41
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.38
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.22
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.16
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.15
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.11
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.09
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.07
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.05
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.03
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.03
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.0
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.0
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.93
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.89
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.84
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.79
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.75
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.67
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.61
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	94.56
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.53
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.41
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.33
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.29
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.27
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.12
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.1
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.1
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.1
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.98
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.94
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	93.85
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.85
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.8
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.8
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	93.77
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.76
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.73
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.73
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.56
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.54
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.49
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.38
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.3
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.28
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.15
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.03
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.01
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.0
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.96
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.94
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.91
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.89
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.86
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.85
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.85
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.83
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.82
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.58
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.54
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.37
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.33
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.27
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	91.66
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.43
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.32
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.2
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.19
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.18
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.02
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.0
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.86
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	90.78
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.68
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	90.57
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.69
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.5
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.32
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	89.29
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	88.93
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	88.93
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.63
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.41
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.38
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.15
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	88.13
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.03
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.61
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.56
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	87.47
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.04
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.78
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.77
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.19
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	86.19
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.84
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.32
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	84.31
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.83
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.68
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.52
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	82.88
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.24
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.07
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	82.02
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	81.4
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	81.37
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.54
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.37
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.35

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-40  Score=298.16  Aligned_cols=219  Identities=70%  Similarity=1.169  Sum_probs=198.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHY  196 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~  196 (335)
                      |||||||||||||++|+++|+++|++|+++++................++++.+.|+.+..+.++|+|||+||......+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~~   81 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNY   81 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchhH
Confidence            79999999999999999999999999999998666555555555566789999999999999999999999997665555


Q ss_pred             cCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh
Q 019794          197 KYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG  276 (335)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~  276 (335)
                      ..++...+++|+.|+.+++++|++.++|+||+||+.+|+.....+.+|+.+....|..|.+.|+.+|.++|.+++.+++.
T Consensus        82 ~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  161 (312)
T d2b69a1          82 MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ  161 (312)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            67888999999999999999999999999999999999998888899988877788888999999999999999999999


Q ss_pred             hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          277 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       277 ~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++++++++||++||||++....+.+++.++.++..++++.++++|++.++|+|++|+|+
T Consensus       162 ~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~  220 (312)
T d2b69a1         162 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN  220 (312)
T ss_dssp             HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHH
T ss_pred             hCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHH
Confidence            99999999999999998876667899999999999999999999999999999999974

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.1e-35  Score=271.40  Aligned_cols=215  Identities=29%  Similarity=0.355  Sum_probs=171.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc----cc--cccCCCceEEEeccccch-----hcc--CCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN----LV--HHFRNPRFELIRHDVVEP-----ILL--EVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~~~~~D~~~~-----~~~--~vD  182 (335)
                      .|+|||||||||||++|+++|+++|++|++++|........    +.  ......+++++.+|+.|.     .+.  ++|
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            37899999999999999999999999999999964422111    11  112345789999999875     233  469


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~----r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      +|||+||..+......++...+++|+.||.||+++|++.++    |||++||+.+||.+...+.+|+     .+..|.+.
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~-----~~~~P~~~  155 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  155 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSH
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC-----CCCCCCCh
Confidence            99999998777777788999999999999999999998753    6999999999998888889998     56778899


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHhCCC-eEEecCCCceeeceecccccC
Q 019794          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIRRQP-MTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~~~~-~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |+.+|.++|.+++.+++.++++++++||++||||+..... ...+..++.++..+++ ...+|++++.++|+||+|+|+
T Consensus       156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~  234 (357)
T d1db3a_         156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHH
Confidence            9999999999999999999999999999999999753321 2345555555555544 566799999999999999873

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=3.2e-35  Score=268.74  Aligned_cols=212  Identities=31%  Similarity=0.505  Sum_probs=180.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCe------EEEEecCCCCC-ccccccccCCCceEEEeccccch-----hccCCCEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDE------VIVIDNFFTGR-KDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~------V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~V  184 (335)
                      |||||||||||||++|+++|+++|++      |+.+++..... ...+........++++.+|..+.     ....+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            68999999999999999999999874      45555433222 22233333456899999998765     45679999


Q ss_pred             EEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHH
Q 019794          185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      +|+|+.........++...+++|+.|+.+++++|.+.++ +||++||..+|+.....+.+|+     .+..|.+.|+.+|
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~-----~~~~p~~~Y~~sK  155 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCC-----CCCCCCCHHHHHH
Confidence            999987655555667888999999999999999999987 8999999999999888888888     6778889999999


Q ss_pred             HHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       264 ~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ..+|.+++.++++++++++++||++||||++.  ..++++.+++++.+++++.++++|++.++|+|++|+|+
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~--~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~  225 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQH--PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCC--TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCC--cCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHH
Confidence            99999999999999999999999999999863  35789999999999999999999999999999999974

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.8e-34  Score=268.12  Aligned_cols=217  Identities=26%  Similarity=0.482  Sum_probs=176.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeE-EEEecCCCC-CccccccccCCCceEEEeccccchh-----c--cCCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEV-IVIDNFFTG-RKDNLVHHFRNPRFELIRHDVVEPI-----L--LEVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V-~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~vD~Vih~  187 (335)
                      |+|||||||||||++|+++|++.|++| +++++.... ....+.......+++++.+|+++..     +  .++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            689999999999999999999999975 445543222 2233344445578999999998762     2  268999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC----------CeEEEEecccccCCCCCCCCCCCc-----CCCCCC
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG----------AKFLLTSTSEVYGDPLEHPQKETY-----WGNVNP  252 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----------~r~v~iSS~~v~~~~~~~~~~E~~-----~~~~~~  252 (335)
                      ||.........++..++++|+.||.+++++|++.+          .+||++||+.+||.....+..|..     +....+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            99766555566888999999999999999998753          279999999999976654443321     122356


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccc
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD  332 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~D  332 (335)
                      ..|.+.|+.+|.++|.+++.++++.+++++++||++||||+..  ..++++.++.++.+++++.++++|++.|+|+||+|
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~--~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D  238 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF--PEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED  238 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC--TTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC--cCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence            6788999999999999999999999999999999999999863  35689999999999999999999999999999999


Q ss_pred             ccC
Q 019794          333 LVH  335 (335)
Q Consensus       333 va~  335 (335)
                      +|+
T Consensus       239 ~a~  241 (361)
T d1kewa_         239 HAR  241 (361)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            974

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.8e-34  Score=262.84  Aligned_cols=215  Identities=29%  Similarity=0.411  Sum_probs=184.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc------ccccCCCceEEEeccccch-----hccCCCE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRHDVVEP-----ILLEVDQ  183 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~D~~~~-----~~~~vD~  183 (335)
                      +.|+|||||||||||++|+++|+++|++|++++|.........      ........++++.+|..|.     ....++.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            4679999999999999999999999999999998554332221      1111235688999999775     4567999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHH
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      |+|+++.........++...+++|+.|+.+++++|.+.++ +||++||..+||.....+.+|+     .+..|.+.|+.+
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~s  169 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYAVT  169 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHHHH
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-----CCCCCCCcchHH
Confidence            9999986655556678888999999999999999999998 9999999999999888889998     677888999999


Q ss_pred             HHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       263 K~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      |.++|++++.+++..+++++++||++|||++..+.  ...+++.++.++++++++.++++|++.++|+||+|+|
T Consensus       170 K~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~  243 (341)
T d1sb8a_         170 KYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV  243 (341)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccc
Confidence            99999999999998999999999999999986544  2458899999999999999999999999999999986

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=7.5e-33  Score=255.38  Aligned_cols=219  Identities=25%  Similarity=0.353  Sum_probs=174.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC--CCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF--TGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      +||+|||||||||||++|+++|++.|++|.++.++.  ..............+++++.+|+.|.     ++.++|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            478999999999999999999999998765555432  22222222233456899999999765     56789999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCC---C----CCCCCcCCCCCCCCCCChHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE---H----PQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~---~----~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      |+.........++...+++|+.|+.+++++|+..+.++|++||+.+||....   .    ......+....+..|.+.|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            9876555555678899999999999999999999999999999999975311   0    00111111224567778999


Q ss_pred             HHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+|.++|.+++.++++++++++++||++||||+.  .....+..++..+..+.++.++++|++.++|+|++|+|+
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~--~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~  233 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ--HIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHST  233 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC--CTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC--CccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHH
Confidence            9999999999999998999999999999999975  235678888889999999999999999999999999874

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-33  Score=254.71  Aligned_cols=214  Identities=24%  Similarity=0.292  Sum_probs=171.6

Q ss_pred             CeE-EEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc-ccc---c---cCCCceEEEeccccchh-----c--cCC
Q 019794          117 LRI-VVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVH---H---FRNPRFELIRHDVVEPI-----L--LEV  181 (335)
Q Consensus       117 ~~v-lVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-~~~---~---~~~~~~~~~~~D~~~~~-----~--~~v  181 (335)
                      ||| ||||||||||++|+++|+++|++|++++|........ +..   .   .....++++.+|+.+..     +  .++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            577 9999999999999999999999999999975432211 111   1   12246889999998752     2  358


Q ss_pred             CEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCC
Q 019794          182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA----KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  257 (335)
Q Consensus       182 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~----r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~  257 (335)
                      ++|+|+|+.........++..++++|+.||.+++++|++.+.    +||++||+.+||.....+.+|+     .+..|.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~P~~  155 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRS  155 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCCS
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-----CCCCCCC
Confidence            899999986555555567788899999999999999998763    6999999999998888888888     6778889


Q ss_pred             hHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC--cchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       258 ~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~--~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .|+.+|.++|++++.++++++++++++||+++|||+.....  ..+...+......+.++..++++++.++|+|++|+|+
T Consensus       156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            99999999999999999889999999999999999754321  2233444555566778888899999999999999873

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=6.6e-32  Score=248.31  Aligned_cols=215  Identities=23%  Similarity=0.407  Sum_probs=177.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A~  189 (335)
                      |||||||||||||++|+++|+++|+ +|+++++....    ........+++++.+|+++.      .+.++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~----~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA----ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG----GGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc----hhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            6899999999999999999999995 89999875322    22233457899999998653      4557999999999


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCC--CCCCCCCChHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGN--VNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~--~~~~~~~~~Y~~sK~~~E  267 (335)
                      .........++...+.+|+.|+.+++++|.+.+.+++++||..+|+........|..+..  .+...|...|+.+|.++|
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E  156 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence            766555566778899999999999999999999999999999999987776665543321  123345688999999999


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCCCCCCC------CcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCLD------DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~------~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      ++++.++++++++++++|++.+||++....      ....+..++.++++|+++.++++|++.++|+|++|+|+
T Consensus       157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~  230 (342)
T d2blla1         157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE  230 (342)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHH
T ss_pred             hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccc
Confidence            999999999999999999999999865322      24468889999999999999999999999999999973

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=1.1e-31  Score=244.32  Aligned_cols=214  Identities=22%  Similarity=0.255  Sum_probs=172.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc-cccccCCCceEEEeccccchh-------ccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHFRNPRFELIRHDVVEPI-------LLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~-------~~~vD~Vih~A  188 (335)
                      |+|||||||||||++|+++|+++|++|++++|........ +.......++.++.+|+.+..       ....++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            6899999999999999999999999999999976543322 222233457899999998752       13478999988


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      +.........++..+++.|+.|+.+++++|++.+.  +|+++||..+|+.......+|+     .+..+.+.|+.+|.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  155 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYG  155 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCC-----CCccccChhHHHHHHH
Confidence            76555556667889999999999999999999885  6888899999988888888887     6778889999999999


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHHHh-CCCeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~~~-~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      |.+++.++++++++++++||+++|||...... .+.+..++.++.. +.+...+++|++.++|+|++|+|+
T Consensus       156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~  226 (321)
T d1rpna_         156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  226 (321)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHH
Confidence            99999999999999999999999999753321 2234444555444 455666799999999999999974

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=1.3e-31  Score=246.31  Aligned_cols=214  Identities=25%  Similarity=0.477  Sum_probs=170.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc--cccCCCceEEEeccccchh-----cc--CCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV--HHFRNPRFELIRHDVVEPI-----LL--EVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~-----~~--~vD~Vih~  187 (335)
                      |||||||||||||++|++.|+++|++|++++|..........  +......++++.+|+.+..     +.  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            689999999999999999999999999999986655443322  2234568999999998762     33  69999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      ||.........++...+++|+.||.+++++|++.++ ++|++||..+|+.....+..|..    .+..+.+.|+.+|..+
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~p~~~Y~~sK~~~  156 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF----PTGTPQSPYGKSKLMV  156 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS----CCCCCSSHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccccccc----ccCCCcchHHHHHhhh
Confidence            987554455567889999999999999999999997 89999999999877666555542    4556788999999999


Q ss_pred             HHHHHHHHhh-hCCcEEEEEeCceeCCCCCCC--------CcchHHHHHHHHHhC-CCeEEecC------CCceeeceec
Q 019794          267 ETLTMDYHRG-AGVEVRIARIFNTYGPRMCLD--------DGRVVSNFVAQAIRR-QPMTVYGD------GKQTRSFQYV  330 (335)
Q Consensus       267 E~l~~~~a~~-~~i~~~ivRp~~v~Gp~~~~~--------~~~~i~~~~~~~~~~-~~~~~~g~------g~~~~~~v~v  330 (335)
                      |.++..+..+ .+++++++|++++||++....        ...+++.++..+..+ .++.++|+      |.+.+||+|+
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v  236 (338)
T d1udca_         157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV  236 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred             hHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence            9999876665 489999999999999864321        134666676666554 46777765      7788999999


Q ss_pred             cccc
Q 019794          331 SDLV  334 (335)
Q Consensus       331 ~Dva  334 (335)
                      +|++
T Consensus       237 ~D~~  240 (338)
T d1udca_         237 MDLA  240 (338)
T ss_dssp             HHHH
T ss_pred             eehh
Confidence            9986

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=4.8e-31  Score=244.54  Aligned_cols=216  Identities=24%  Similarity=0.361  Sum_probs=169.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      +.|||||||||||||++|+++|+++|++|+++++.......   ...  ...++..+|+.+.     .+.++|.|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---~~~--~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---EDM--FCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---GGG--TCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhc--ccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            57799999999999999999999999999999875443221   111  2335555666543     5678999999997


Q ss_pred             CCCCCCc-cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCc--CCCCCCCCCCChHHHHHHH
Q 019794          190 PASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETY--WGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       190 ~~~~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~--~~~~~~~~~~~~Y~~sK~~  265 (335)
                      ....... ...+...+..|+.++.+++++|++.++ +||++||..+|+.....+.+|..  +....+..|.+.|+.+|..
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence            6544332 456788999999999999999999998 89999999999987766665542  2334566778999999999


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC---cchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD---GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~---~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|.+++.+.++++++++++||+++||++.....   ......+........+...+++|.+.|+|+|++|+|+
T Consensus       169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~  241 (363)
T d2c5aa1         169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  241 (363)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHH
Confidence            999999999999999999999999999754321   2234445555666778888899999999999999873

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-30  Score=236.85  Aligned_cols=205  Identities=24%  Similarity=0.339  Sum_probs=157.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--ccCCCEEEEccCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--LLEVDQIYHLACPASP  193 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~vD~Vih~A~~~~~  193 (335)
                      .|||||||||||||++|+++|+++|+.|+++++..+              +++.+.+..+..  ...+|.|||+|+....
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            468999999999999999999999999887654321              111111111122  2358999999875432


Q ss_pred             CC-ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHH
Q 019794          194 VH-YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM  271 (335)
Q Consensus       194 ~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~  271 (335)
                      .. ...+....++.|+.||.+++++|++.++ +|||+||+++|+.....+.+|+......+..+.+.|+.+|.++|++++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~  147 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE  147 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            22 2345677889999999999999999997 899999999999888888888755444455555789999999999999


Q ss_pred             HHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHH-----HHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          272 DYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSN-----FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       272 ~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~-----~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      .+.++.|++++++||++||||+....  ...+...     +......+.++.+++++...++|+|++|++
T Consensus       148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~  217 (315)
T d1e6ua_         148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA  217 (315)
T ss_dssp             HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHH
T ss_pred             HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhH
Confidence            99999999999999999999976433  2223222     334455677889899999999999999986

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.2e-30  Score=244.40  Aligned_cols=219  Identities=26%  Similarity=0.304  Sum_probs=165.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc----------c--c------cccccCCCceEEEeccccch-
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK----------D--N------LVHHFRNPRFELIRHDVVEP-  176 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~----------~--~------~~~~~~~~~~~~~~~D~~~~-  176 (335)
                      ||||||||||||||++|+++|++.|++|+++|.......          .  .      ........+++++.+|+.|. 
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            689999999999999999999999999999974211100          0  0      00111235789999999875 


Q ss_pred             ----hcc--CCCEEEEccCCCCCCCccCC---hhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCC
Q 019794          177 ----ILL--EVDQIYHLACPASPVHYKYN---PVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       177 ----~~~--~vD~Vih~A~~~~~~~~~~~---~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                          ++.  ++|+|||+||.........+   +...+++|+.||.+++++|++.+.  ++++.||..+|+.... +..|.
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~  159 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEG  159 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccc
Confidence                233  57999999986554333333   456789999999999999999885  5777777777765332 22222


Q ss_pred             cC---------CCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCC---------------Ccch
Q 019794          246 YW---------GNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLD---------------DGRV  301 (335)
Q Consensus       246 ~~---------~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~---------------~~~~  301 (335)
                      .+         ....+..|.+.|+.+|..+|.+++.++++++++++++||++||||+....               ...+
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence            11         11235567789999999999999999999999999999999999974321               1346


Q ss_pred             HHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          302 VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       302 i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +..++.++..++++.++|++.+.|||+||+|+|+
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~  273 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ  273 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHH
Confidence            8889999999999999999999999999999873

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=5.6e-30  Score=236.06  Aligned_cols=213  Identities=25%  Similarity=0.444  Sum_probs=161.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc--cccCCCceEEEeccccchh-----c--cCCCEEEEc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV--HHFRNPRFELIRHDVVEPI-----L--LEVDQIYHL  187 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~-----~--~~vD~Vih~  187 (335)
                      |.|||||||||||++|+++|+++|++|+++++..........  .......++++.+|+.+..     +  .++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            689999999999999999999999999999876554433221  2223457889999997752     2  379999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC----CCCCCcCCCCCCCCCCChHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH----PQKETYWGNVNPIGERSCYDEG  262 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~----~~~E~~~~~~~~~~~~~~Y~~s  262 (335)
                      ||...+.....++..++.+|+.|+.+++++|++.++ ++|++||..+||.....    +.+|+     .+..+.+.|+.+
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~-----~~~~p~~~Y~~s  156 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNPYGHT  156 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccc-----cCCCCCChhHhH
Confidence            997655556667888999999999999999999997 89999999999876543    34444     566778999999


Q ss_pred             HHHHHHHHHHHHhh--hCCcEEEEEeCceeCCCCCC--------CCcchHHHHHHHHH-hCCCeEEecCCCceeeceecc
Q 019794          263 KRTAETLTMDYHRG--AGVEVRIARIFNTYGPRMCL--------DDGRVVSNFVAQAI-RRQPMTVYGDGKQTRSFQYVS  331 (335)
Q Consensus       263 K~~~E~l~~~~a~~--~~i~~~ivRp~~v~Gp~~~~--------~~~~~i~~~~~~~~-~~~~~~~~g~g~~~~~~v~v~  331 (335)
                      |.++|++++.+.+.  .+++++++||+++||+....        ..+.+++.++..+. ++.++.++|++...++++|++
T Consensus       157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~  236 (347)
T d1z45a2         157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR  236 (347)
T ss_dssp             HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred             HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence            99999999998754  58999999999999975321        12345666665554 356678888888888888888


Q ss_pred             ccc
Q 019794          332 DLV  334 (335)
Q Consensus       332 Dva  334 (335)
                      |++
T Consensus       237 d~~  239 (347)
T d1z45a2         237 DYI  239 (347)
T ss_dssp             CEE
T ss_pred             eee
Confidence            865

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=2.4e-29  Score=230.36  Aligned_cols=213  Identities=23%  Similarity=0.317  Sum_probs=162.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc----cc---ccccCCCceEEEeccccchh-------ccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD----NL---VHHFRNPRFELIRHDVVEPI-------LLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~~~~~~D~~~~~-------~~~vD  182 (335)
                      |++||||||||||++|+++|+++|++|++++|.......    .+   ........+.++.+|+.+..       -.++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            689999999999999999999999999999996442111    11   11123456788999997752       24689


Q ss_pred             EEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC------CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG------AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       183 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~------~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      +|||+|+........+++...+..|+.|+.++++++++..      .++++.||+.+|+.. ....+|+     .|..|.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~-----~~~~p~  155 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSET-----TPFHPR  155 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTT-----SCCCCC
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCC-----CCCCCc
Confidence            9999998765555556888999999999999999987642      257777777777654 3456777     577888


Q ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-cchHHHHHHHH-HhCCCeEEecCCCceeeceeccccc
Q 019794          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-GRVVSNFVAQA-IRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-~~~i~~~~~~~-~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      +.|+.+|..+|.++..+++.++++++++||++||||+..... ...+..++... ..+.+..+.|++.+.|+|+|++|+|
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a  235 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  235 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence            999999999999999999999999999999999999753221 12233333333 3445566679999999999999987


Q ss_pred             C
Q 019794          335 H  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       236 ~  236 (339)
T d1n7ha_         236 E  236 (339)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=2.9e-28  Score=227.40  Aligned_cols=219  Identities=23%  Similarity=0.350  Sum_probs=162.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCccc------------------cccccCCCceEEEeccccch
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDN------------------LVHHFRNPRFELIRHDVVEP  176 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~------------------~~~~~~~~~~~~~~~D~~~~  176 (335)
                      .|||||||||||||++|+++|++ .|++|+++|+........                  .........+.++.+|+.|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57999999999999999999996 689999998632211100                  00111234678999999875


Q ss_pred             h--------ccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCC--CC
Q 019794          177 I--------LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQK--ET  245 (335)
Q Consensus       177 ~--------~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~--E~  245 (335)
                      .        ..++|+|||+|+.........++...+++|+.++.++++++++.++ +++++||..+|+........  +.
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            2        2468999999987665555567788899999999999999999997 79999998888765443221  11


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCC-------cchHHHHHHHHH--------
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD-------GRVVSNFVAQAI--------  310 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~-------~~~i~~~~~~~~--------  310 (335)
                      ......+..|.+.|+.+|...|.+++.+.+.+|++++++||+++|||+.....       ..+++.++..+.        
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence            11122566788999999999999999999989999999999999999865332       344555544433        


Q ss_pred             --------hCCCeEEec------CCCceeeceeccccc
Q 019794          311 --------RRQPMTVYG------DGKQTRSFQYVSDLV  334 (335)
Q Consensus       311 --------~~~~~~~~g------~g~~~~~~v~v~Dva  334 (335)
                              .+.++.++|      +|.+.|||+||+|+|
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~  279 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLA  279 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHH
Confidence                    345666665      478889999999987

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.3e-28  Score=223.81  Aligned_cols=215  Identities=26%  Similarity=0.410  Sum_probs=165.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc--------ccccCCCceEEEeccccchh-----c--cC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--------VHHFRNPRFELIRHDVVEPI-----L--LE  180 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~~D~~~~~-----~--~~  180 (335)
                      .|||||||||||||++|+++|+++|++|+++++.........        .......++.++.+|++|..     +  .+
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            468999999999999999999999999999987433221111        11234568899999998762     2  34


Q ss_pred             CCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChH
Q 019794          181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCY  259 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y  259 (335)
                      +++++|+||..+......++...+++|+.|+.+++++|++.++ +||++||+.+|+........+..    ....+.+.|
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~----~~~~~~~~Y  157 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH----PTGGCTNPY  157 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCSSHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccc----cccccCChH
Confidence            7789999997665555667889999999999999999999997 89999999999887655444331    234556789


Q ss_pred             HHHHHHHHHHHHHHHhh-hCCcEEEEEeCceeCCCCCC--------CCcchHHHHHHHHHh-CCCeEEec------CCCc
Q 019794          260 DEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMCL--------DDGRVVSNFVAQAIR-RQPMTVYG------DGKQ  323 (335)
Q Consensus       260 ~~sK~~~E~l~~~~a~~-~~i~~~ivRp~~v~Gp~~~~--------~~~~~i~~~~~~~~~-~~~~~~~g------~g~~  323 (335)
                      +.+|..+|+.++.+++. .+++.+++||+++||++...        ....+++.++..+.. +.++.+++      ++.+
T Consensus       158 ~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~  237 (346)
T d1ek6a_         158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG  237 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCe
Confidence            99999999999988765 58999999999999986421        124456666665554 55666655      4667


Q ss_pred             eeeceeccccc
Q 019794          324 TRSFQYVSDLV  334 (335)
Q Consensus       324 ~~~~v~v~Dva  334 (335)
                      .|||+|++|+|
T Consensus       238 ~Rdfi~v~D~a  248 (346)
T d1ek6a_         238 VRDYIHVVDLA  248 (346)
T ss_dssp             EECEEEHHHHH
T ss_pred             eEeEEEEEecc
Confidence            89999999987

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=1e-27  Score=218.82  Aligned_cols=218  Identities=29%  Similarity=0.435  Sum_probs=164.6

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-cccccccCCCceEEEeccccch-----hcc--CCCEEEEccC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVHHFRNPRFELIRHDVVEP-----ILL--EVDQIYHLAC  189 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~--~vD~Vih~A~  189 (335)
                      ||||||||||||++|+++|+++|++|+++++...... ..+.......+++++.+|+.+.     ++.  ++|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999999999999986433322 2222223456889999999875     232  4799999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec-ccccCCCCCCCCCCC-----------cCCCCCCCCCC
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST-SEVYGDPLEHPQKET-----------YWGNVNPIGER  256 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS-~~v~~~~~~~~~~E~-----------~~~~~~~~~~~  256 (335)
                      .........++...+++|+.||.+|+++|.+.++ ++|++|| ..+++.....+..+.           .+....+..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            7655445557889999999999999999999987 6666555 444444332221111           11122445667


Q ss_pred             ChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCCCC-CCcchHHHHHHHHHh-----CCCeEEecCCCceeeceec
Q 019794          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL-DDGRVVSNFVAQAIR-----RQPMTVYGDGKQTRSFQYV  330 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~-~~~~~i~~~~~~~~~-----~~~~~~~g~g~~~~~~v~v  330 (335)
                      +.|+.+|...|.+...+.+.+++...++|+.++||+.... .....++.++..+.+     ++++.++|+|++.++|+|+
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v  241 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA  241 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence            8999999999999999999999999999999999875432 245567777776654     6789999999999999999


Q ss_pred             ccccC
Q 019794          331 SDLVH  335 (335)
Q Consensus       331 ~Dva~  335 (335)
                      +|+|+
T Consensus       242 ~D~~~  246 (338)
T d1orra_         242 EDMIS  246 (338)
T ss_dssp             HHHHH
T ss_pred             cchhh
Confidence            99873

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.95  E-value=4.6e-27  Score=216.48  Aligned_cols=214  Identities=22%  Similarity=0.259  Sum_probs=165.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-------ccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-------LLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------~~~vD~Vih  186 (335)
                      .++|||||||||||||++|+++|+++|++|++++|.................++++.+|+.|..       ...+|+|+|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            4789999999999999999999999999999999976654443322223457899999998752       235899999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-e-EEEEecccccCCCC-CCCCCCCcCCCCCCCCCCChHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-K-FLLTSTSEVYGDPL-EHPQKETYWGNVNPIGERSCYDEGK  263 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r-~v~iSS~~v~~~~~-~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (335)
                      +|+.........++...+.+|+.|+.+++++|++.+. + +++.|+..++.... ..+.+|+     .+..+.+.|+.+|
T Consensus        86 ~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-----~~~~p~~~y~~~k  160 (356)
T d1rkxa_          86 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSK  160 (356)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHH
T ss_pred             hhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccc-----cccCCCCcccccc
Confidence            9987555445667889999999999999999999875 4 45555554444333 3344444     4566778999999


Q ss_pred             HHHHHHHHHHHhh---------hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          264 RTAETLTMDYHRG---------AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       264 ~~~E~l~~~~a~~---------~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ...|..+..++.+         .++.++++||+++|||++.. ...+++.+++.+..+.++ .++++.+.++|+|++|+|
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~  238 (356)
T d1rkxa_         161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPL  238 (356)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHH
T ss_pred             ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch-hhHHHHHHHHHHhCCCce-EEeecccccccccccccc
Confidence            9999999887653         47899999999999998532 356777787777665554 568999999999999987

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.95  E-value=1.7e-27  Score=219.03  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=160.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--ccc-ccCCCceEEEeccccch-----hccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVH-HFRNPRFELIRHDVVEP-----ILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~-~~~~~~~~~~~~D~~~~-----~~~~vD~Vi  185 (335)
                      ..||+|||||||||||++|+++|+++|++|++++|+.......  ... .........+.+|+.+.     ++.++|+|+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            3588999999999999999999999999999999865322111  011 11223344577787653     678899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCC----CCCCCCCcCC-----------
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-KFLLTSTSEVYGDPL----EHPQKETYWG-----------  248 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-r~v~iSS~~v~~~~~----~~~~~E~~~~-----------  248 (335)
                      |+|+..   ....++...+..|+.||.+++++|.+.+ + +|||+||..++....    ....+|+.|.           
T Consensus        89 ~~a~~~---~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  165 (342)
T d1y1pa1          89 HIASVV---SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             ECCCCC---SCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             hhcccc---cccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence            999753   3445677888999999999999999874 4 899999976543221    2233444332           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCCCCCCC-CcchHHHHHHHHHhCCCeEEecCCCcee
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCLD-DGRVVSNFVAQAIRRQPMTVYGDGKQTR  325 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp~~~~~-~~~~i~~~~~~~~~~~~~~~~g~g~~~~  325 (335)
                      ...+..+.+.|+.+|..+|.+++.+++++  +++++++||+++|||...+. ....+..++..+.+++.... ..++..+
T Consensus       166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~  244 (342)
T d1y1pa1         166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQ  244 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCCSE
T ss_pred             ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCccce
Confidence            22344556789999999999999998775  57788999999999975443 34567788888888776544 4456678


Q ss_pred             eceecccccC
Q 019794          326 SFQYVSDLVH  335 (335)
Q Consensus       326 ~~v~v~Dva~  335 (335)
                      +|+||+|+|+
T Consensus       245 ~~v~v~Dva~  254 (342)
T d1y1pa1         245 YYVSAVDIGL  254 (342)
T ss_dssp             EEEEHHHHHH
T ss_pred             eeeeHHHHHH
Confidence            9999999873

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.5e-25  Score=199.69  Aligned_cols=208  Identities=24%  Similarity=0.314  Sum_probs=149.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEec-cccch-----hccCCCEEEEccCCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRH-DVVEP-----ILLEVDQIYHLACPA  191 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~~-----~~~~vD~Vih~A~~~  191 (335)
                      |||||||||||++|+++|+++|+ +|+++++.....+..  ........+.... |..+.     .+..+++|+|+|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV--NLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH--HHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh--cccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            89999999999999999999996 788887543332221  1112223333332 22222     346689999999743


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHH
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTM  271 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~  271 (335)
                      .  ....+.......|+.++.+++++++..++++++.||..++.........|+     .+..+.+.|+.+|..+|.+++
T Consensus        80 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~-----~~~~~~~~Y~~~K~~~e~~~~  152 (307)
T d1eq2a_          80 S--TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLFDEYVR  152 (307)
T ss_dssp             C--TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHHHHHHH
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccchhhhhcc
Confidence            3  233466778899999999999999999999999999888877666555555     455677899999999999999


Q ss_pred             HHHhhhCCcEEEEEeCceeCCCCCCC--CcchHHHHHHHHHhCCCeE-EecCCCceeeceecccccC
Q 019794          272 DYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQAIRRQPMT-VYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       272 ~~a~~~~i~~~ivRp~~v~Gp~~~~~--~~~~i~~~~~~~~~~~~~~-~~g~g~~~~~~v~v~Dva~  335 (335)
                      .++++.+++++++||+++|||+....  ...++..+..++..++... ..|++...++|+|++|+|+
T Consensus       153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~  219 (307)
T d1eq2a_         153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (307)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             ccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHH
Confidence            99999999999999999999986433  2346677777787776544 3478888999999999873

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.92  E-value=2.2e-25  Score=198.24  Aligned_cols=188  Identities=21%  Similarity=0.257  Sum_probs=154.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACPASPV  194 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~~~~~  194 (335)
                      |||||||||||||++|+++|.++|++|++++|..-               ++.+.+..+..+.  ++|+|||+|+.....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~---------------D~~d~~~~~~~l~~~~~d~vih~a~~~~~~   66 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDL---------------DITNVLAVNKFFNEKKPNVVINCAAHTAVD   66 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTC---------------CTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechhc---------------cCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence            68999999999999999999999999999987421               1111111223333  689999999876555


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYH  274 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a  274 (335)
                      .....+......|+..+.++.+.+...+..++++||..+|+.....+..|.     ++..+...|+.+|...|.+++.  
T Consensus        67 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~-----~~~~~~~~~~~~k~~~e~~~~~--  139 (281)
T d1vl0a_          67 KCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGENFVKA--  139 (281)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHHHHHHH--
T ss_pred             cccccchhhcccccccccccccccccccccccccccceeeecccccccccc-----ccccchhhhhhhhhHHHHHHHH--
Confidence            555677888899999999999999998889999999999998888888887     5667788999999999988754  


Q ss_pred             hhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          275 RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       275 ~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                        .+.+++++||+++||++     .++...++..+.++.++.++++  ..++|+|++|+|+
T Consensus       140 --~~~~~~i~R~~~vyG~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~  191 (281)
T d1vl0a_         140 --LNPKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLAR  191 (281)
T ss_dssp             --HCSSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHH
T ss_pred             --hCCCccccceeEEeCCC-----cccccchhhhhccCCceeecCC--ceeccchhhhhhh
Confidence              57899999999999997     4677888889999888887664  7899999999873

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4e-24  Score=185.75  Aligned_cols=184  Identities=15%  Similarity=0.066  Sum_probs=133.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccc-----hhccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~vD~Vih  186 (335)
                      .++|+|||||||||||++|+++|+++|.  +|++++|++.......     ...++...+|..+     .++.++|+|||
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeecccccccccccccccccccc
Confidence            3557999999999999999999999995  8999999764433222     1345555566543     36788999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      ++|..   ....++..+.++|+.++.+++++|++.++ +||++||..++.                  .+.+.|+.+|..
T Consensus        87 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~------------------~~~~~Y~~~K~~  145 (232)
T d2bkaa1          87 CLGTT---RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK------------------SSNFLYLQVKGE  145 (232)
T ss_dssp             CCCCC---HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT------------------TCSSHHHHHHHH
T ss_pred             ccccc---ccccchhhhhhhcccccceeeecccccCccccccCCcccccc------------------CccchhHHHHHH
Confidence            99742   22335667889999999999999999998 799999987753                  223679999999


Q ss_pred             HHHHHHHHHhhhCC-cEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          266 AETLTMDYHRGAGV-EVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i-~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +|..+..    .++ +++|+||+.+||++..   .+....+........     ..+......|+++|+|+
T Consensus       146 ~E~~l~~----~~~~~~~IlRP~~i~G~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~  204 (232)
T d2bkaa1         146 VEAKVEE----LKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVR  204 (232)
T ss_dssp             HHHHHHT----TCCSEEEEEECCEEECTTGG---GSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHH
T ss_pred             hhhcccc----ccccceEEecCceeecCCCc---CcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHH
Confidence            9998754    465 4899999999998742   233333334443321     22223335689999874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-23  Score=174.98  Aligned_cols=176  Identities=15%  Similarity=0.139  Sum_probs=134.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~A~  189 (335)
                      .||||+||||||+||++++++|+++|++|++++|++.+....     ....++++.+|+.+.     ++.++|+|||++|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g   76 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhcCCCEEEEEec
Confidence            478999999999999999999999999999999976543322     235688999998775     5789999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  268 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (335)
                      .....       ...+++..++.++++++++.++ |||++||..++.+....            ......|...|..+|+
T Consensus        77 ~~~~~-------~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------------~~~~~~~~~~~~~~e~  137 (205)
T d1hdoa_          77 TRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------PPRLQAVTDDHIRMHK  137 (205)
T ss_dssp             CTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------CGGGHHHHHHHHHHHH
T ss_pred             cCCch-------hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------------cccccccchHHHHHHH
Confidence            53221       1225788999999999999998 89999998887543221            1112468888988888


Q ss_pred             HHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          269 LTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       269 l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +++    +.+++++++||+.+++....                 +...+..++.....+++++|+|+
T Consensus       138 ~l~----~~~~~~tiirp~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~DvA~  183 (205)
T d1hdoa_         138 VLR----ESGLKYVAVMPPHIGDQPLT-----------------GAYTVTLDGRGPSRVISKHDLGH  183 (205)
T ss_dssp             HHH----HTCSEEEEECCSEEECCCCC-----------------SCCEEESSSCSSCSEEEHHHHHH
T ss_pred             HHH----hcCCceEEEecceecCCCCc-----------------ccEEEeeCCCCCCCcCCHHHHHH
Confidence            774    36999999999999875321                 23344566667778899998863

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.88  E-value=4.9e-23  Score=183.91  Aligned_cols=186  Identities=20%  Similarity=0.173  Sum_probs=142.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhcc--CCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL--EVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~--~vD~Vih~A~  189 (335)
                      |||||||||||||++|+++|.+.|+. +++++....                +.+|+.+     ..+.  ++|+|||+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence            68999999999999999999998864 444443211                1234433     2333  5799999999


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .........++...++.|+.++.+++++|++.+.+++++||+.+|+.....+.+|.     .+..+.+.|+.+|..+|..
T Consensus        64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~-----~~~~p~~~y~~~k~~~e~~  138 (298)
T d1n2sa_          64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEKA  138 (298)
T ss_dssp             CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHHH
T ss_pred             cccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccc-----cccCCCchHhhhhhhhhhh
Confidence            76665667788899999999999999999999999999999999988888888888     5677889999999999998


Q ss_pred             HHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceeccccc
Q 019794          270 TMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV  334 (335)
Q Consensus       270 ~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva  334 (335)
                      ++.+    .....++|++..|+..    .......+...+..+..+...+  +..++++|++|++
T Consensus       139 ~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~  193 (298)
T d1n2sa_         139 LQDN----CPKHLIFRTSWVYAGK----GNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLA  193 (298)
T ss_dssp             HHHH----CSSEEEEEECSEECSS----SCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHH
T ss_pred             HHhh----hcccccccccceeecc----CCccchhhhhhhcccceeeccc--ceeecccccchHH
Confidence            8664    3456677777666543    1344555666677776666543  4688999999876

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.4e-22  Score=173.21  Aligned_cols=146  Identities=19%  Similarity=0.255  Sum_probs=110.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccc---cchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV---VEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~vD~Vih~A~~  190 (335)
                      .|+|||||||||||++|+++|+++|+  +|+++.|+....         ...++....|+   .+.....+|+|||++|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------cccccccccchhhhhhccccchheeeeeeee
Confidence            37999999999999999999999998  666666643221         12233333333   33345668999999874


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHH
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  269 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l  269 (335)
                      .  .........+.+.|+.++.+++++|++.++ +++++||..+++.                  ..+.|..+|..+|+.
T Consensus        73 ~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------------------~~~~y~~~K~~~E~~  132 (212)
T d2a35a1          73 T--IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQA  132 (212)
T ss_dssp             C--HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHHH
T ss_pred             e--ccccccccccccchhhhhhhcccccccccccccccccccccccc------------------cccchhHHHHHHhhh
Confidence            2  222334567889999999999999999997 8999999877632                  236799999999988


Q ss_pred             HHHHHhhhCC-cEEEEEeCceeCCCC
Q 019794          270 TMDYHRGAGV-EVRIARIFNTYGPRM  294 (335)
Q Consensus       270 ~~~~a~~~~i-~~~ivRp~~v~Gp~~  294 (335)
                      ++.    .+. +++++||+.|||+..
T Consensus       133 l~~----~~~~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         133 LQE----QGWPQLTIARPSLLFGPRE  154 (212)
T ss_dssp             HTT----SCCSEEEEEECCSEESTTS
T ss_pred             ccc----cccccceeeCCcceeCCcc
Confidence            753    455 599999999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.85  E-value=1.2e-20  Score=164.98  Aligned_cols=164  Identities=16%  Similarity=0.173  Sum_probs=127.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.....+...+. ...++..+.+|+.++            .+..
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHH-cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999999754322222222 235788999999876            2467


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||........    ++|...+++|+.++..+++++.    +.+ .++|++||....                .
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~----------------~  144 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW----------------L  144 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG----------------S
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc----------------c
Confidence            99999999976554432    4688999999999999998764    334 489999997664                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  189 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  189 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence            33445689999999999999999874   8999999999987653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=7.2e-21  Score=166.02  Aligned_cols=163  Identities=16%  Similarity=0.102  Sum_probs=129.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+..++...+ + ..++..+.+|+.++            .+..
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE-L-ADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-T-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-h-hCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            46889999999999999999999999999999999976443322222 2 24677889999876            2457


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||........    ++|.+.+++|+.++..+++.+.    +.+ .++|++||...+                .
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~----------------~  144 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL----------------A  144 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------S
T ss_pred             CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc----------------c
Confidence            99999999976554432    3578899999999999988653    333 389999997664                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      +......|+.+|++.+.+++.++.++   ||+++.|.||.|..+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  189 (244)
T d1nffa_         145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM  189 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence            33445789999999999999999874   8999999999997653

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.84  E-value=7.7e-21  Score=166.79  Aligned_cols=161  Identities=16%  Similarity=0.105  Sum_probs=128.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.  ..++..+.+|+.++            .+..
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999765433322222  24678899999875            2457


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||.......    .++|...+++|+.++..+++++.+    .+ .++|++||...+                .
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~----------------~  143 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL----------------M  143 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------S
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc----------------c
Confidence            9999999997655443    235778999999999999987643    34 499999997664                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      +......|+.+|.+.+.+.+.++.+.   |++++.|.||.|..
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T  186 (254)
T d1hdca_         144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT  186 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccC
Confidence            33445789999999999999999874   89999999999965

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.84  E-value=1.7e-20  Score=163.08  Aligned_cols=155  Identities=17%  Similarity=0.129  Sum_probs=121.0

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +++++|+++||||+++||++++++|+++|++|++++|+....          ..+..+.+|++++            .+.
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999999975432          2345678888775            245


Q ss_pred             CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|++|||||.......    .++|++.+++|+.++..+++.+.    +.+. ++|++||....                
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~----------------  136 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL----------------  136 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc----------------
Confidence            79999999997655443    34678899999999998887653    3444 89999997654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|.+.+.+++.++.+   +||+++.|.||.|..+
T Consensus       137 ~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~  181 (237)
T d1uzma1         137 WGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD  181 (237)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCCh
Confidence            23334568999999999999999987   4899999999999654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=9e-21  Score=165.32  Aligned_cols=184  Identities=15%  Similarity=0.120  Sum_probs=134.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+..++..    .......+.+|+.++            .+..
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA----EAVGAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HHcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            468899999999999999999999999999999999754332222    233567889999775            2457


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV----GA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||.......    .++|...+++|+.++..+.+++.+.    +. .++++||....                 
T Consensus        78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~-----------------  140 (242)
T d1ulsa_          78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-----------------  140 (242)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG-----------------
T ss_pred             ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc-----------------
Confidence            9999999997655443    2357889999999999999887543    33 56666765432                 


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDG  321 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g  321 (335)
                      +......|+.+|.+.+.+.+.++.++   |++++.|.||.|-.+...    .....+.....+..++..++.+
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~pl~R~~~p  209 (242)
T d1ulsa_         141 GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA----KVPEKVREKAIAATPLGRAGKP  209 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS----SSCHHHHHHHHHTCTTCSCBCH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh----cCCHHHHHHHHhcCCCCCCCCH
Confidence            22334689999999999999999874   899999999999876432    2223344444444444333333

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4.9e-21  Score=167.10  Aligned_cols=162  Identities=15%  Similarity=0.098  Sum_probs=128.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ++++|+++||||+++||++++++|+++|++|++.+|+++..++.. +.+ ..++..+.+|++++            .+..
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~-~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAIS-DYL-GANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHH-GGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHh-CCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            368999999999999999999999999999999999754333222 222 23567888999775            2457


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||........    ++|...+++|+.++..+++++.    +.+ .++|++||...+                .
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~----------------~  142 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGT----------------M  142 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH----------------H
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhc----------------C
Confidence            99999999976554432    3678899999999999998874    334 489999997655                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+.   |++++.|.||.+-.+
T Consensus       143 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~  186 (243)
T d1q7ba_         143 GNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD  186 (243)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEech
Confidence            33445689999999999999999874   899999999998654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.84  E-value=8.3e-21  Score=166.46  Aligned_cols=164  Identities=15%  Similarity=0.119  Sum_probs=128.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+..++.........++..+.+|+.++            .+..
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999999997554333222222345788999999876            3467


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|++|||||........    ++|...+++|+.++..+++++..    .+  .++|++||...+                
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~----------------  146 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF----------------  146 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT----------------
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee----------------
Confidence            99999999976554432    35778999999999999998643    23  378999997654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp  292 (335)
                      .+......|+.+|.+.+.+.+.++.+     +||+++.|.||.|..+
T Consensus       147 ~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~  193 (251)
T d1zk4a1         147 VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP  193 (251)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred             ccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence            23334468999999999999988865     3799999999999654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.84  E-value=1.2e-20  Score=166.01  Aligned_cols=163  Identities=16%  Similarity=0.160  Sum_probs=128.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---cccccCCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|+++||||+++||++++++|+++|++|++.+|+.+...+.   +.......++..+.+|+.++            .+
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999999999976543322   12222345788899999876            34


Q ss_pred             cCCCEEEEccCCCCCCC-c----cCChhhHHhhHHHHHHHHHHHHHH----c-CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKR----V-GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|++|||||...... .    .++|...+++|+.++..+++++..    . +.++|++||...+              
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~--------------  147 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI--------------  147 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT--------------
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc--------------
Confidence            67999999999654322 2    235788999999999999987633    2 3489999997654              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       148 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~  192 (258)
T d1iy8a_         148 --RGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP  192 (258)
T ss_dssp             --SBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred             --cCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence              233445789999999999999999874   899999999998654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=5.9e-21  Score=167.41  Aligned_cols=165  Identities=12%  Similarity=-0.013  Sum_probs=128.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~~  179 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+...+...+.. ...++..+.+|++++            .+.
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999997554332222111 124688899999876            346


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      .+|++|||||........    ++|...+++|+.++..+++++.    +.+ .++|++||...+                
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~----------------  150 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL----------------  150 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH----------------
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhc----------------
Confidence            799999999976554432    3678899999999999988763    334 499999997654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|++.+.+++.++.+.   ||+++.|.||.|..+.
T Consensus       151 ~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~  196 (251)
T d2c07a1         151 TGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM  196 (251)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence            233344689999999999999999874   8999999999997764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.8e-20  Score=163.44  Aligned_cols=162  Identities=15%  Similarity=0.091  Sum_probs=127.3

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQ  183 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~  183 (335)
                      ++++||++|||||+++||++++++|+++|++|++++|+.+...+... .  ...+..+.+|+.++        .+.++|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-~--~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-E--CPGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-H--STTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-h--cCCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            35789999999999999999999999999999999987543322222 2  23577888999776        3467999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c-C-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V-G-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||||.......    .++|...+++|+.++..+.+++.+    . + .++|++||...+                .+.
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~----------------~~~  141 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH----------------VTF  141 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT----------------SCC
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc----------------ccC
Confidence            9999997655443    235788999999999999887643    2 2 389999997654                233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|.+.+.+++.++.+.   ||+++.|.||.+..+
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~  183 (242)
T d1cyda_         142 PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD  183 (242)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred             CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence            445789999999999999999874   899999999998654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.84  E-value=1.4e-20  Score=165.58  Aligned_cols=163  Identities=18%  Similarity=0.139  Sum_probs=129.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.  ..++..+.+|++++            .+..
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999999754433322222  35678899999876            2457


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c--CCeEEEEecccccCCCCCCCCCCCcCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V--GAKFLLTSTSEVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~r~v~iSS~~v~~~~~~~~~~E~~~~~~  250 (335)
                      +|++|||||.......    .++|...+++|+.|+..+++++..    .  +.++|++||...+                
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------------  143 (256)
T d1k2wa_          80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR----------------  143 (256)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------------
T ss_pred             ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc----------------
Confidence            9999999997654432    235788999999999999886432    2  2389999997664                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.+-.+.
T Consensus       144 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         144 RGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             cccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence            334445789999999999999999774   8999999999987663

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.2e-20  Score=165.20  Aligned_cols=161  Identities=20%  Similarity=0.216  Sum_probs=126.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+..++ +.+.  ......+.+|++++            .+..
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA-LEQE--LPGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHh--cCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999999987543322 2222  23577889999775            3467


Q ss_pred             CCEEEEccCCCCCCC-c----cCChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||...... .    .++|.+.+++|+.++.++++++.    +.+.++|++||....                .
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~----------------~  143 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA----------------I  143 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH----------------H
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccc----------------c
Confidence            999999999654322 2    23578899999999999998764    334699999997654                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+.+.++.+.   ||+++.|.||.|..+
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~  187 (250)
T d1ydea1         144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP  187 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence            33344689999999999999999874   899999999998543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.84  E-value=4.5e-22  Score=178.56  Aligned_cols=190  Identities=18%  Similarity=0.198  Sum_probs=134.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc---cccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      .+||||||||||||++|+++|+++|++|++++|+.......   ....+....++++.+|+.+.     .+.+++.+|++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            46899999999999999999999999999999976543321   11223456789999998765     56789999998


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHH
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA  266 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (335)
                      ++....           ..|..++.+++++|.+.+. ++++.||..++.....           .+..+...|...|..+
T Consensus        83 ~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~-----------~~~~~~~~~~~~~~~~  140 (312)
T d1qyda_          83 LAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME-----------HALQPGSITFIDKRKV  140 (312)
T ss_dssp             CCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC-----------CCCSSTTHHHHHHHHH
T ss_pred             hhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc-----------cccchhhhhhHHHHHH
Confidence            864221           3566677788999988875 8888887655432211           2334445676666666


Q ss_pred             HHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       267 E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      +...    .+.+++++++||+.+||+....    +...+......++++.++++++..++|+|++|+|+
T Consensus       141 ~~~~----~~~~~~~~i~r~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  201 (312)
T d1qyda_         141 RRAI----EAASIPYTYVSSNMFAGYFAGS----LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT  201 (312)
T ss_dssp             HHHH----HHTTCCBCEEECCEEHHHHTTT----SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             HHhh----cccccceEEeccceeecCCccc----hhhHHHHhhhcccccccccccccccceeeHHHHHH
Confidence            6543    5568999999999999975321    11111122234566777899999999999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-20  Score=162.74  Aligned_cols=162  Identities=16%  Similarity=0.119  Sum_probs=128.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCE
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQ  183 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~  183 (335)
                      +.++||++|||||+++||++++++|+++|++|++++|+.+...+.. ...  ..+..+.+|+.++        .+..+|+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-~~~--~~~~~~~~Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-REC--PGIEPVCVDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHS--TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-Hhc--CCCeEEEEeCCCHHHHHHHHHHhCCceE
Confidence            4578999999999999999999999999999999999754333222 222  3567888899775        3567999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR-----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~-----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||||.......    .++|...+++|+.++..+.+++.+     .+ .++|++||....                .+.
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------------~~~  143 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ----------------RAV  143 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT----------------SCC
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc----------------ccc
Confidence            9999997655443    246788999999999999887643     22 389999997664                233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       144 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~  185 (244)
T d1pr9a_         144 TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTS  185 (244)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred             cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence            445689999999999999999874   899999999999765

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2.3e-20  Score=163.28  Aligned_cols=159  Identities=18%  Similarity=0.159  Sum_probs=126.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .++||++|||||+++||++++++|+++|++|++.+|+.+..+  ..+.   ....++.+|++++            .+..
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~--~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE--VAEA---IGGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH--HHHH---HTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHH---cCCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999999999999999754321  1111   2346788999875            3467


Q ss_pred             CCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          181 VDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      +|++|||||...+....    ++|.+.+++|+.++.++.+++.+    .+. ++|++||...+                .
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~----------------~  140 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL----------------F  140 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT----------------S
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc----------------c
Confidence            99999999976554432    35788999999999999988743    333 89999998765                2


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|++.+.+++.++.+.   ||+++.|.||.|-.+
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  184 (248)
T d2d1ya1         141 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  184 (248)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence            33445789999999999999999874   899999999998654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.83  E-value=2.1e-20  Score=164.75  Aligned_cols=164  Identities=16%  Similarity=0.087  Sum_probs=128.3

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.+  ...++..+.+|++++            .+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999997543322222221  234678899999876            24


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-C-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-A-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      ..+|++|||||.......    .++|.+.+++|+.++..+.+++.+    .+ . .+|++||....              
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~--------------  149 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK--------------  149 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT--------------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc--------------
Confidence            579999999997665443    236788999999999999887643    33 2 58889997654              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       150 --~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~  194 (261)
T d1geea_         150 --IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP  194 (261)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred             --ccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCH
Confidence              233445689999999999999999874   899999999999765

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.4e-20  Score=165.41  Aligned_cols=166  Identities=15%  Similarity=0.100  Sum_probs=130.0

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------h
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~  177 (335)
                      .+.+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.. ...++..+.+|+.++            .
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999987543332221111 234688899999875            2


Q ss_pred             ccCCCEEEEccCCCCCCCc---cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          178 LLEVDQIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      +..+|++|||||.......   .++|...+++|+.++..+++.+.+    .+. ++|++||...+               
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~---------------  150 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE---------------  150 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT---------------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh---------------
Confidence            4679999999997654433   235788999999999999887643    333 89999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       151 -~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~  195 (255)
T d1fmca_         151 -NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD  195 (255)
T ss_dssp             -CCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred             -ccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence             333445789999999999999999874   899999999999664

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=3e-20  Score=162.80  Aligned_cols=166  Identities=17%  Similarity=0.093  Sum_probs=128.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.+...+...+..  ...++..+.+|+.++            .+
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999997654433222211  134678899999875            34


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|++|||||.......    .++|...+++|+.++..+++++.+    .+ .++|+++|.....              
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~--------------  147 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE--------------  147 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc--------------
Confidence            579999999997554443    236788999999999999998654    23 3899999865421              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+.+.+++.++.+.   |++++.|.||.|-.+.
T Consensus       148 -~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~  193 (251)
T d1vl8a_         148 -VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM  193 (251)
T ss_dssp             -CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred             -ccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence             122334679999999999999999874   8999999999997664

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.83  E-value=1e-20  Score=166.75  Aligned_cols=163  Identities=12%  Similarity=0.047  Sum_probs=127.9

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc---cCCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|++|||||+++||++++++|+++|++|++.+|+.....+.+...   ....++.++.+|+.++            .+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999998753322222211   1235788899999875            24


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .++|++|||||........    ++|...+++|+.++..+++++.    +.+. ++|++||...+               
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~---------------  146 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL---------------  146 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT---------------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce---------------
Confidence            6799999999976654432    3578899999999999888763    3343 99999997664               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|.+.+.+++.++.+.   |++++.|.||.|-.+
T Consensus       147 -~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~  191 (260)
T d1x1ta1         147 -VASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP  191 (260)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred             -eccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence             233445689999999999999999874   899999999998665

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=2.4e-20  Score=164.27  Aligned_cols=165  Identities=14%  Similarity=0.086  Sum_probs=119.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc-
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL-  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~-  178 (335)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+...+...+. ....++..+.+|+.++            .+ 
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            568999999999999999999999999999999999755433322221 1234688899999765            23 


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|++|||||.......    .++|...+++|+.++..+++++.+    .+ .++|++||....               
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~---------------  149 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV---------------  149 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc---------------
Confidence            359999999997654443    235788999999999999987643    34 499999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+.
T Consensus       150 -~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~  195 (259)
T d1xq1a_         150 -VSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL  195 (259)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred             -ccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence             233345789999999999999999874   8999999999987653

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.83  E-value=5.2e-20  Score=162.95  Aligned_cols=165  Identities=16%  Similarity=0.166  Sum_probs=128.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+..++...+......+.++.+|+.++            .+..
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999997654433333332345677889999875            3457


Q ss_pred             CCEEEEccCCCCCCC--c----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          181 VDQIYHLACPASPVH--Y----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       181 vD~Vih~A~~~~~~~--~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      +|++|||||......  .    .++|...+++|+.|+..+++++.+    .+. ++|++||...+.              
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~--------------  148 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--------------  148 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--------------
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc--------------
Confidence            999999999654332  1    235778999999999999987743    333 899999876542              


Q ss_pred             CCCCCC-CChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGE-RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~-~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                        +..+ ...|+.+|.+.+.+++.++.++   ||+++.|.||.|..+.
T Consensus       149 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  194 (268)
T d2bgka1         149 --AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL  194 (268)
T ss_dssp             --CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred             --cccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence              1122 2379999999999999999774   8999999999998764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.82  E-value=3.2e-20  Score=163.52  Aligned_cols=164  Identities=14%  Similarity=0.086  Sum_probs=128.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+...+..... ....++..+.+|+.++            .+.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999999754433222111 1234678899999875            346


Q ss_pred             CCCEEEEccCCCCCC-Cc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          180 EVDQIYHLACPASPV-HY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      .+|++|||||..... ..    .++|...+++|+.++..+++++.+    .+ .++|++||...+               
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~---------------  146 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV---------------  146 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH---------------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhc---------------
Confidence            799999999965432 22    235788999999999999887643    23 389999997665               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|-.+
T Consensus       147 -~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         147 -KGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             -SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             -cCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence             233445689999999999999999874   899999999998664

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.82  E-value=9.1e-20  Score=159.99  Aligned_cols=161  Identities=18%  Similarity=0.122  Sum_probs=128.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccc--cccccCCCceEEEecccc-ch------------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN--LVHHFRNPRFELIRHDVV-EP------------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~-~~------------  176 (335)
                      +++++|+||||||+++||.+++++|+++|++|+++.|+.+.....  +........+.++.+|+. +.            
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999998876543221  122334557888888886 32            


Q ss_pred             hccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCcCC
Q 019794          177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV--------GAKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~--------~~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      .+..+|++|||||...    .+.+++.+++|+.|+.++.+++.+.        +.++|++||...+              
T Consensus        81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~--------------  142 (254)
T d1sbya1          81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF--------------  142 (254)
T ss_dssp             HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT--------------
T ss_pred             HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc--------------
Confidence            2357999999998543    4678999999999999999877442        1379999997765              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+......|+.+|.+...+++.++.+.   |++++.|.||.|..+
T Consensus       143 --~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         143 --NAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             --SCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             --cCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence              344555789999999999999999774   899999999999865

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.82  E-value=8.4e-20  Score=160.72  Aligned_cols=165  Identities=14%  Similarity=0.039  Sum_probs=128.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc-CCCceEEEeccccch------------hc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF-RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~  178 (335)
                      .++++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.. ...++..+.+|+.++            .+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999997554433222211 235677889999775            23


Q ss_pred             c-CCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCC
Q 019794          179 L-EVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       179 ~-~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      . .+|++|||||.......    .++|...+++|+.++..+.+++.+    .+. ++|++||....              
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~--------------  149 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA--------------  149 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT--------------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc--------------
Confidence            3 59999999997654443    235788999999999999887643    333 89999997654              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                        .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       150 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~  194 (259)
T d2ae2a_         150 --LAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS  194 (259)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred             --cccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCH
Confidence              233445789999999999999999874   899999999998654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.82  E-value=3.7e-21  Score=171.44  Aligned_cols=184  Identities=17%  Similarity=0.233  Sum_probs=128.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc----ccccCCCceEEEeccccch-----hccCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL----VHHFRNPRFELIRHDVVEP-----ILLEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih  186 (335)
                      .|||||||||||||++++++|+++|++|++++|+........    ........++++.+|+.+.     .+.+++.|||
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            578999999999999999999999999999999765433211    1122345688899998765     4578999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHH
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT  265 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (335)
                      +++.               .+..++.+++++++..+. ++++.|+...+..       +.     ........|...+..
T Consensus        83 ~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~-----~~~~~~~~~~~~~~~  135 (307)
T d1qyca_          83 TVGS---------------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NV-----HAVEPAKSVFEVKAK  135 (307)
T ss_dssp             CCCG---------------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SC-----CCCTTHHHHHHHHHH
T ss_pred             cccc---------------cccchhhHHHHHHHHhccccceeeeccccccc-------cc-----ccccccccccccccc
Confidence            8853               345566688888888887 6777666433211       11     111222334444544


Q ss_pred             HHHHHHHHHhhhCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCCceeeceecccccC
Q 019794          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH  335 (335)
Q Consensus       266 ~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~~~~v~v~Dva~  335 (335)
                      .+..+    .+.+++++++||+++||+...     .+..+.....++....++++++..++|+|++|+|+
T Consensus       136 ~~~~~----~~~~~~~~i~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  196 (307)
T d1qyca_         136 VRRAI----EAEGIPYTYVSSNCFAGYFLR-----SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT  196 (307)
T ss_dssp             HHHHH----HHHTCCBEEEECCEEHHHHTT-----TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred             ccchh----hccCCCceecccceecCCCcc-----chhhhhhhhhhcccceeeecccccccCCcHHHHHH
Confidence            44443    456999999999999997532     12223334455677888899999999999999873

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.82  E-value=3.7e-20  Score=162.40  Aligned_cols=162  Identities=20%  Similarity=0.187  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+..++.. ..+ ..+...+.+|+.++            .+..
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA-AEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999998654333222 222 24567888998775            3467


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|++|||||.......    .++|.+.+++|+.++..+++++.+    .+.++|++||...+                .+
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~----------------~~  144 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW----------------LP  144 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT----------------SC
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh----------------cC
Confidence            9999999997655433    235788999999999999888654    33489999997664                23


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.+|.+.+.+++.++.+.     +|+++.|.||.|..+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~  189 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence            4445789999999999999888763     599999999999653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.82  E-value=5.8e-20  Score=161.64  Aligned_cols=161  Identities=16%  Similarity=0.069  Sum_probs=126.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      +|++|||||+++||++++++|+++|++|++.+|+.+...+...+. ....++..+.+|+.++            .+..+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999754433222211 1234688899999876            346799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH------cC-CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR------VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~------~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      ++|||||.......    .++|...+++|+.++..+++++.+      .+ .++|++||...+                .
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~----------------~  145 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK----------------Q  145 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT----------------S
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc----------------c
Confidence            99999997655443    235788999999999999998754      23 379999987654                3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.+|.+.+.+++.++.+.   ||+++.|.||.|-.+
T Consensus       146 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  189 (257)
T d2rhca1         146 GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP  189 (257)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence            34445789999999999999999884   799999999998543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5e-20  Score=160.61  Aligned_cols=165  Identities=10%  Similarity=-0.007  Sum_probs=128.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~  178 (335)
                      .+..||+++||||+++||++++++|+++|++|++++|+.+..++...+. ....++..+.+|++++            .+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999765433222211 1235788899999876            34


Q ss_pred             cCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|++|||||........+    .++.++++|+.|+.++++++.    +.+. ++|++||...+               
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~---------------  147 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH---------------  147 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C---------------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc---------------
Confidence            57999999999766544332    467899999999999988763    3344 89999997664               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhh------hCCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRG------AGVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~------~~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|++.+.+.+.++.+      .|++++++.||.|-.+
T Consensus       148 -~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~  195 (244)
T d1yb1a_         148 -VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG  195 (244)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence             23333467999999999999999876      3799999999988654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.81  E-value=1.2e-19  Score=159.29  Aligned_cols=160  Identities=20%  Similarity=0.089  Sum_probs=124.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccCCCE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLEVDQ  183 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~vD~  183 (335)
                      |+++||||+++||++++++|+++|++|++.+|+.+..++...+. ....++..+.+|++++            .+..+|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            45799999999999999999999999999999765433222111 1234688899999876            3467999


Q ss_pred             EEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          184 IYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG--AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       184 Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|||||.......    .++|...+++|+.|+.++++++.+    .+  .++|++||...+                .+.
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------------~~~  145 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------------VGN  145 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------------SCC
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc----------------ccC
Confidence            9999997654443    235788999999999999887633    23  369999987654                334


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|.+.+.+++.++.+.   ||+++.|.||.|-.+
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         146 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence            445789999999999999999774   899999999998543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=1.8e-19  Score=159.72  Aligned_cols=164  Identities=14%  Similarity=0.078  Sum_probs=124.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----cCCCceEEEeccccch------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEP------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~------------  176 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.    ....++..+.+|+.++            
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999765433222111    1234688999999875            


Q ss_pred             hccCCCEEEEccCCCCCCCcc-----C---ChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEecc-cccCCCCCCCCC
Q 019794          177 ILLEVDQIYHLACPASPVHYK-----Y---NPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTS-EVYGDPLEHPQK  243 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~~-----~---~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~-~v~~~~~~~~~~  243 (335)
                      .+.++|++|||||...+....     .   .|...+++|+.++..+++++.+    .+..+|+++|+ ...         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~---------  152 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP---------  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS---------
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc---------
Confidence            345799999999976543321     1   3778899999999999987644    34466666553 322         


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                             .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|-.+
T Consensus       153 -------~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  197 (272)
T d1xkqa_         153 -------QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  197 (272)
T ss_dssp             -------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             -------cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence                   233445679999999999999999774   899999999998654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.81  E-value=3.5e-20  Score=161.74  Aligned_cols=160  Identities=14%  Similarity=0.044  Sum_probs=124.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------ILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~vD  182 (335)
                      ++||||||+++||++++++|+++|++|++.+++.....+.+.+.+  ...++..+.+|+.++            .+..+|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            389999999999999999999999999987764332222222221  134678899999876            246799


Q ss_pred             EEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          183 QIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       183 ~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ++|||||.......    .++|++.+++|+.++..+.+++.+    .+ .++|++||...+                .+.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~----------------~~~  145 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL----------------IGN  145 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH----------------HCC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc----------------CCC
Confidence            99999997655443    236788999999999999887643    34 499999997654                233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|.+.+.+.+.++.++   |++++.|.||.+-.+
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~  187 (244)
T d1edoa_         146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD  187 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred             CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccH
Confidence            445789999999999999999874   899999999998654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.80  E-value=3.9e-19  Score=154.10  Aligned_cols=156  Identities=15%  Similarity=0.108  Sum_probs=122.5

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHL  187 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~  187 (335)
                      +++|++|||||+++||++++++|+++|++|++.+|+.+..++        ...+++.+|+.+.      .+.++|++|||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            578999999999999999999999999999999986432211        2334567777653      46789999999


Q ss_pred             cCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCCh
Q 019794          188 ACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSC  258 (335)
Q Consensus       188 A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~  258 (335)
                      ||.......    .++|.+.+++|+.++..+++++.    +.+. ++|+++|....                .+......
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~----------------~~~~~~~~  137 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI----------------SPIENLYT  137 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----------------SCCTTBHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc----------------cccccccc
Confidence            996544432    23578899999999999988763    3343 89999987654                33444568


Q ss_pred             HHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          259 YDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      |+.+|.+.+.+++.++.+.   ||+++.|.||.+..+.
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  175 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  175 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence            9999999999999999874   8999999999987664

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.80  E-value=3e-19  Score=158.57  Aligned_cols=162  Identities=17%  Similarity=0.125  Sum_probs=125.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+...+...+ . ..++..+.+|+.++            .+..
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD-H-GDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-H-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-c-CCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999975433322221 1 24678889998775            3467


Q ss_pred             CCEEEEccCCCCCCCc-----cC----ChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcC
Q 019794          181 VDQIYHLACPASPVHY-----KY----NPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~-----~~----~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +|++|||||.......     .+    .|.+.+++|+.++..+++++.    +.+.++|+++|...+             
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~-------------  146 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGF-------------  146 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT-------------
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhc-------------
Confidence            9999999996543221     11    377899999999999988763    345688998886543             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh--CCcEEEEEeCceeCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~--~i~~~ivRp~~v~Gp  292 (335)
                         .+......|+.+|.+.+.+++.++.+.  +|+++.|.||.|-.+
T Consensus       147 ---~~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~  190 (276)
T d1bdba_         147 ---YPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSD  190 (276)
T ss_dssp             ---STTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred             ---cCCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence               233344679999999999999999875  599999999998654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.6e-19  Score=157.09  Aligned_cols=157  Identities=18%  Similarity=0.175  Sum_probs=123.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc---ccccCCCceEEEeccccch------------hcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL---VHHFRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      +||++|||||+++||++++++|+++|++|++++|+.+...+..   .+.....++..+.+|++++            .+.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999765433222   2222345788899999875            346


Q ss_pred             CCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc------C--CeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV------G--AKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~------~--~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      .+|++|||||...    ..++++.+++|+.++.++.+++.+.      +  .++|++||...+                .
T Consensus        82 ~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~----------------~  141 (254)
T d2gdza1          82 RLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL----------------M  141 (254)
T ss_dssp             CCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT----------------S
T ss_pred             CcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc----------------c
Confidence            7999999998643    3578899999999999888876432      1  369999997664                3


Q ss_pred             CCCCCChHHHHHHHHHHHHHH--HHhh---hCCcEEEEEeCceeC
Q 019794          252 PIGERSCYDEGKRTAETLTMD--YHRG---AGVEVRIARIFNTYG  291 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~--~a~~---~~i~~~ivRp~~v~G  291 (335)
                      +......|+.+|.+.+.+++.  ++.+   +|++++.|.||.|-.
T Consensus       142 ~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T  186 (254)
T d2gdza1         142 PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT  186 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCC
Confidence            444457899999999999885  4443   489999999999854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.3e-20  Score=163.47  Aligned_cols=163  Identities=14%  Similarity=0.115  Sum_probs=126.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc---cccc---CCCceEEEeccccch----------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL---VHHF---RNPRFELIRHDVVEP----------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~---~~~~---~~~~~~~~~~D~~~~----------  176 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+..   ...+   ...++..+.+|+.++          
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999765433221   1111   235788899999876          


Q ss_pred             --hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCC
Q 019794          177 --ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRV-----GAKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-----~~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                        .+..+|++|||||.......    .++|...+++|+.++..+++++.+.     +.++|++|+....           
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-----------  157 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-----------  157 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-----------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-----------
Confidence              24579999999996554433    2357889999999999999887542     2368877664332           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                            .......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       158 ------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  201 (297)
T d1yxma1         158 ------GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ  201 (297)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred             ------cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence                  22334679999999999999999874   899999999999765

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.80  E-value=1.1e-19  Score=160.06  Aligned_cols=199  Identities=15%  Similarity=0.082  Sum_probs=138.5

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------  176 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------  176 (335)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.....+...+..  ...++..+.+|+.++            
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999998765443322211  135688899999876            


Q ss_pred             hccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----c-CC-eEEEEecccccCCCCCCCCCCCc
Q 019794          177 ILLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----V-GA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~-~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      .+..+|++|||||.......    .++|++.+++|+.|+..+.+++.+    . +. +++.++|...+......      
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~------  157 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------  157 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc------
Confidence            34579999999997554433    235788999999999999887543    2 33 56666665543211000      


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCCCCCCCcchHHHHHHHHHhCCCeEEecCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGK  322 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~  322 (335)
                         ..+......|+.+|.+.+.+++.++.+   +|++++.|.||.|-.+..    ......+.....+.-++..++.++
T Consensus       158 ---~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~----~~~~~~~~~~~~~~~pl~R~g~pe  229 (260)
T d1h5qa_         158 ---LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT----AHMDKKIRDHQASNIPLNRFAQPE  229 (260)
T ss_dssp             ---TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG----GGSCHHHHHHHHHTCTTSSCBCGG
T ss_pred             ---cccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch----hccCHHHHHHHHhcCCCCCCcCHH
Confidence               011123467999999999999999976   489999999999976532    122234444455544443334443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.80  E-value=1.9e-19  Score=158.89  Aligned_cols=164  Identities=12%  Similarity=0.055  Sum_probs=122.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----cCCCceEEEeccccch------------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEP------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~------------  176 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+.    ....++..+.+|+.++            
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999755433222211    2234688999999775            


Q ss_pred             hccCCCEEEEccCCCCCCC--------ccCChhhHHhhHHHHHHHHHHHHHH----cCCeEEEEeccc-ccCCCCCCCCC
Q 019794          177 ILLEVDQIYHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKR----VGAKFLLTSTSE-VYGDPLEHPQK  243 (335)
Q Consensus       177 ~~~~vD~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~r~v~iSS~~-v~~~~~~~~~~  243 (335)
                      .+.++|++|||||...+..        ..++|+..+++|+.++..+++++.+    .+..+|+++|+. .+         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~---------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL---------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS---------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc---------
Confidence            2467999999999643221        2235788999999999999887643    345677766643 22         


Q ss_pred             CCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                             .+......|+.+|.+.+.+++.++.+.   |++++.|.||.|-.+
T Consensus       153 -------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~  197 (264)
T d1spxa_         153 -------HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG  197 (264)
T ss_dssp             -------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred             -------ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence                   233344679999999999999999874   899999999999665

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.80  E-value=2.4e-19  Score=159.10  Aligned_cols=163  Identities=14%  Similarity=0.049  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc----cCCCceEEEeccccch------------h
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~------------~  177 (335)
                      +++|+++||||+++||++++++|+++|++|++.+|+.+..++...+.    ....++..+.+|+.++            .
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999999754333222111    1234688999999876            2


Q ss_pred             ccCCCEEEEccCCCCCCC--c----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASPVH--Y----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~--~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +..+|++|||||......  .    .++|...+++|+.++..+.+++.+    .+. +++++||....            
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~------------  149 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP------------  149 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS------------
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc------------
Confidence            457999999999643322  1    234788999999999999888754    333 67777765433            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                          .+......|+.+|.+.+.+++.++.+.   ||+++.|.||.|..+
T Consensus       150 ----~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~  194 (274)
T d1xhla_         150 ----QAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG  194 (274)
T ss_dssp             ----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred             ----ccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence                233344679999999999999999874   899999999999754

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.80  E-value=4.6e-19  Score=155.81  Aligned_cols=165  Identities=14%  Similarity=0.092  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc-
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL-  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~-  178 (335)
                      ++++|++|||||+++||++++++|+++|++|++++|++....+..... .....+.++.+|+.++            .+ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999999764333222111 1235677889999775            22 


Q ss_pred             cCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|+||||||.......    .++|...+++|+.++..+.+++..    .+. ++|++||....               
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~---------------  147 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF---------------  147 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT---------------
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc---------------
Confidence            348999999997655443    236788999999999999887643    233 89999997764               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                       .+......|+.+|.+.+.+++.++.++   ||++++|.||.+..+.
T Consensus       148 -~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~  193 (258)
T d1ae1a_         148 -SALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL  193 (258)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred             -cccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence             233445789999999999999999874   8999999999998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4e-19  Score=156.16  Aligned_cols=166  Identities=14%  Similarity=0.046  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccch------------h
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .+++|++|||||+++||.+++++|+++|++|++.+|+.+...+...   ......++..+.+|+.++            .
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4889999999999999999999999999999999997544333222   222235788899999876            3


Q ss_pred             ccCCCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHH----HcC---CeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG---AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~---~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +.++|++|||||.......    .+.|+..+++|+.++..+.+++.    +.+   .++|++||...+..          
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------  156 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  156 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC----------
Confidence            4679999999997654443    33578899999999999877763    333   48999999765421          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhh-----hCCcEEEEEeCceeCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-----~~i~~~ivRp~~v~Gp  292 (335)
                          .|......|+.+|...+.+++.++.+     .+++++.|.||.+-.+
T Consensus       157 ----~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         157 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence                22333356999999999999999865     4799999999987543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.79  E-value=4.7e-19  Score=154.07  Aligned_cols=160  Identities=13%  Similarity=0.075  Sum_probs=124.4

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCe-------EEEEecCCCCCccccccc-cCCCceEEEeccccch------------h
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDE-------VIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~-------V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~  177 (335)
                      +||||||+++||++++++|+++|++       |++.+|+.+...+...+. ....++..+.+|++++            .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999987       888888654332222211 1235678899999876            3


Q ss_pred             ccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCC
Q 019794          178 LLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWG  248 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~  248 (335)
                      +..+|++|||||........    ++|...+++|+.|+..+++++.    +.+ .++|++||...+              
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~--------------  148 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT--------------  148 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT--------------
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc--------------
Confidence            46799999999976554432    3678899999999999988764    334 489999997665              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          249 NVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                        .+......|+.+|.+.+.+.+.++.+   .|++++.+.||.|-.+.
T Consensus       149 --~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~  194 (240)
T d2bd0a1         149 --KAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  194 (240)
T ss_dssp             --SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             --CCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence              33444578999999999999999877   48999999999997753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.79  E-value=1.6e-19  Score=158.61  Aligned_cols=166  Identities=14%  Similarity=0.046  Sum_probs=123.5

Q ss_pred             CCCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~  177 (335)
                      .++++|+++||||+|  +||++++++|+++|++|++.+|++..................+.+|+.++            .
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            357899999999998  89999999999999999998886433222111111234567888998775            2


Q ss_pred             ccCCCEEEEccCCCCCCC--------ccCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCc
Q 019794          178 LLEVDQIYHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      +.++|++|||||......        ..+++...+++|+.++..+++++...   +.++|++||....            
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~------------  151 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------------  151 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------------
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc------------
Confidence            457999999998643211        12246678999999999999987653   2379999997654            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          .+......|+.+|.+.+.+++.++.+.   |++++.|.||.+..+.
T Consensus       152 ----~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~  197 (256)
T d1ulua_         152 ----KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA  197 (256)
T ss_dssp             ----SBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             ----CCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence                233445789999999999999999874   8999999999987764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=7.6e-19  Score=157.75  Aligned_cols=163  Identities=12%  Similarity=0.022  Sum_probs=119.7

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcc-----ccc---cccCCCceEEEeccccch-------
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD-----NLV---HHFRNPRFELIRHDVVEP-------  176 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~-----~~~---~~~~~~~~~~~~~D~~~~-------  176 (335)
                      +.+++|+++||||+++||++++++|+++|++|++.+++.+....     .+.   ..... ......+|+.+.       
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCEEEEECCCGGGHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-cccccccccchHHHHHHHH
Confidence            46789999999999999999999999999999999887543211     111   11110 111222232221       


Q ss_pred             -----hccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCC
Q 019794          177 -----ILLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQ  242 (335)
Q Consensus       177 -----~~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~  242 (335)
                           .+.++|++|||||......+.    ++|...+++|+.|+..+++++.    +.+ .++|++||...+        
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~--------  153 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI--------  153 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH--------
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc--------
Confidence                 356799999999976655432    3578899999999999998763    334 499999997654        


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                              .+......|+.+|.+.+.+.+.++.+.   ||+++.|.||.+-.
T Consensus       154 --------~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t  197 (302)
T d1gz6a_         154 --------YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR  197 (302)
T ss_dssp             --------HCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred             --------CCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence                    223344689999999999999999874   89999999997744

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.2e-18  Score=150.27  Aligned_cols=161  Identities=16%  Similarity=0.078  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIY  185 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vi  185 (335)
                      +++|++|||||+++||+++++.|+++|++|++.+|++...++    ......++....|+.++        .+.++|++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhccCCceeeeeccccccccccccccccceeEE
Confidence            789999999999999999999999999999999997543222    22234566666676544        346799999


Q ss_pred             EccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCC
Q 019794          186 HLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKR----VG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  256 (335)
Q Consensus       186 h~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~  256 (335)
                      ||||........    ++|...+++|+.++..+.+++..    .+ .++|++||...-               ..+....
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~---------------~~~~~~~  144 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS---------------VKGVVNR  144 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT---------------TBCCTTB
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc---------------cCCccch
Confidence            999976654432    35788999999999999887643    33 389999885431               0233445


Q ss_pred             ChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          257 SCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       257 ~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      ..|+.+|.+.+.+++.++.+.   ||+++.|.||.|-.+.
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  184 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence            789999999999999999874   8999999999997653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=4.5e-19  Score=152.62  Aligned_cols=159  Identities=15%  Similarity=0.116  Sum_probs=110.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCe--EEEEecCCCCCccccccccCCCceEEEeccccch-----hccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDE--VIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----ILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~vD~Vih~  187 (335)
                      .+++|||||||||||++++++|+++|++  |+++.|+++...    .  ....++++.+|+.+.     ++.++|+|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~----~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE----K--IGGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH----H--TTCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH----h--ccCCcEEEEeeeccccccccccccceeeEEE
Confidence            4679999999999999999999999975  556666543211    1  123567888887664     57889999999


Q ss_pred             cCCCCCCCc-------------cCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          188 ACPASPVHY-------------KYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       188 A~~~~~~~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      |+.......             ...+.....+|+.++.+++..+..... .+.+.|+...+.....           ...
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----------~~~  144 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----------LNK  144 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----------GGG
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----------ccc
Confidence            985432211             123456778999999999999988877 6777777665432110           011


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      .....|...+...+.+    ..+.+++++++||+++||+..
T Consensus       145 ~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         145 LGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             GGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCT
T ss_pred             ccccchhhhhhhhhhh----hhcccccceeecceEEECCCc
Confidence            1123455555544433    455799999999999999974

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.78  E-value=3.3e-19  Score=155.19  Aligned_cols=161  Identities=19%  Similarity=0.144  Sum_probs=123.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      .+++|+++||||+++||++++++|+++|++|++.+|+.+...+...+ + ..++..+.+|+.++            .+.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA-L-EAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-C-CSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-c-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999999976544333222 2 34677889999775            3467


Q ss_pred             CCEEEEccCCCCCCCc----cCChhhHHhhHHHHHHHHHHHHHHcC--Ce-EEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          181 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAKRVG--AK-FLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~--~r-~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      +|++|||||.......    .++|...+++|+.+..++.+++...-  .+ ++++||....                 +.
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----------------~~  142 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----------------GA  142 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----------------CH
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----------------cc
Confidence            9999999987554432    23577899999999999999887653  23 4444444321                 11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      .....|+.+|++.|.+++.++++.   |+++++|.||.+-.+
T Consensus       143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~  184 (241)
T d2a4ka1         143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTP  184 (241)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCG
T ss_pred             cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCH
Confidence            234579999999999999999885   799999999999654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=1.2e-17  Score=145.83  Aligned_cols=165  Identities=13%  Similarity=0.007  Sum_probs=122.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCCCccccccccCCCceEEEeccccchh--------------c
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLID---RGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI--------------L  178 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------------~  178 (335)
                      ||+||||||+++||.+++++|++   .|++|++.+|+.+..++.........++.++.+|+.++.              .
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            78999999999999999999974   689999999987654332111112457889999997751              2


Q ss_pred             cCCCEEEEccCCCCCCC-cc----CChhhHHhhHHHHHHHHHHHHHHc----------------CCeEEEEecccccCCC
Q 019794          179 LEVDQIYHLACPASPVH-YK----YNPVKTIKTNVMGTLNMLGLAKRV----------------GAKFLLTSTSEVYGDP  237 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~-~~----~~~~~~~~~Nv~gt~~ll~~a~~~----------------~~r~v~iSS~~v~~~~  237 (335)
                      ..+|++|||||...... ..    ++++..+++|+.|+..+++++...                +.++|++||....-..
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            45999999999754432 21    236779999999999998875321                2379999986432100


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                   .+......|+.||++...+.+.++.+.   |++++.+.||.|-.+-
T Consensus       162 -------------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         162 -------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             -------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             -------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence                         233344689999999999999988764   8999999999997764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=3e-18  Score=151.79  Aligned_cols=168  Identities=17%  Similarity=0.139  Sum_probs=128.4

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch----------
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP----------  176 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~----------  176 (335)
                      |....+++|++|||||+++||++|+++|+++|++|++.+++.....+...+.+  ....+..+.+|+.++          
T Consensus        11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            34556889999999999999999999999999999999886543322222211  235688899999875          


Q ss_pred             --hccCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcC
Q 019794          177 --ILLEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       177 --~~~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                        .+..+|++||+++........    +++...+++|+.++..+++++...   +.++++++|.....            
T Consensus        91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~------------  158 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA------------  158 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC------------
T ss_pred             HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc------------
Confidence              346799999999976554432    357789999999999999998764   23788887754321            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                         .+......|+.+|++.+.+++.++.++   ||+++.|.||.|-.
T Consensus       159 ---~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T  202 (272)
T d1g0oa_         159 ---KAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKT  202 (272)
T ss_dssp             ---SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             ---ccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCC
Confidence               123344679999999999999999874   89999999999854

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.76  E-value=1e-18  Score=153.73  Aligned_cols=163  Identities=17%  Similarity=0.105  Sum_probs=124.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------hc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++||+||||||+++||++++++|+++|++|++.++......+.....+  ...++..+.+|+.++            .+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999988775443322222222  234678899999875            34


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecc-cccCCCCCCCCCCCcCCCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTS-EVYGDPLEHPQKETYWGNV  250 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~-~v~~~~~~~~~~E~~~~~~  250 (335)
                      ..+|++|||||........    +.++..+++|+.+..++++++.+.-   .++++++|. ..+                
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~----------------  146 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM----------------  146 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC----------------
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc----------------
Confidence            5799999999976554432    3577899999999999999887642   256666654 322                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeC
Q 019794          251 NPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (335)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~G  291 (335)
                      .+......|+.+|.+.+.+++.++.++   |++++.|.||.+-.
T Consensus       147 ~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T  190 (259)
T d1ja9a_         147 TGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKT  190 (259)
T ss_dssp             CSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccC
Confidence            223344679999999999999999874   89999999999864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.7e-18  Score=150.23  Aligned_cols=163  Identities=11%  Similarity=0.101  Sum_probs=125.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc--cCCCceEEEeccccch------------hcc
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH--FRNPRFELIRHDVVEP------------ILL  179 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~------------~~~  179 (335)
                      ++||+++||||+++||++++++|+++|++|++++|+.+..++...+.  ........+.+|+.+.            ...
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999999765443332221  2334566777777553            345


Q ss_pred             CCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCcCCCCC
Q 019794          180 EVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVGAKFLLTSTSEVYGDPLEHPQKETYWGNVN  251 (335)
Q Consensus       180 ~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~  251 (335)
                      .+|++++|||........    +++...+++|+.++..+.+.+.    +.+.++|++||...+                .
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~----------------~  155 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK----------------V  155 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT----------------S
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc----------------C
Confidence            699999999876554432    2456789999999998888764    345589999997654                3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          252 PIGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      +......|+.||++.+.+.+.++.|.     +++++.+.||.|-.+
T Consensus       156 ~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~  201 (269)
T d1xu9a_         156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  201 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence            44455789999999999999998763     689999999998654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=4.2e-18  Score=149.13  Aligned_cols=160  Identities=13%  Similarity=0.112  Sum_probs=117.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-------hccCCCEEEEccCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-------ILLEVDQIYHLACP  190 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~vD~Vih~A~~  190 (335)
                      +++||||+++||++++++|+++|++|++.+|+.+...+..........+++.+.+..+.       .+..+|++|||||.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            79999999999999999999999999999987554322111111122334333322211       34679999999986


Q ss_pred             CCCC-Cc----cCChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHH
Q 019794          191 ASPV-HY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD  260 (335)
Q Consensus       191 ~~~~-~~----~~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (335)
                      .... ..    .++|...+++|+.++..+++++.    +.+ .++|++||...+                .+......|+
T Consensus        82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~----------------~~~~~~~~Y~  145 (252)
T d1zmta1          82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF----------------GPWKELSTYT  145 (252)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT----------------SCCTTCHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc----------------cccccccccc
Confidence            4332 22    23578899999999999988763    333 499999997664                2334446899


Q ss_pred             HHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          261 EGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       261 ~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      .+|.+.+.+++.++.+.   ||+++.|.||.|..+.
T Consensus       146 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~  181 (252)
T d1zmta1         146 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSED  181 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred             cccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcc
Confidence            99999999999999874   8999999999997654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-17  Score=148.25  Aligned_cols=161  Identities=19%  Similarity=0.146  Sum_probs=120.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc--cccc---cc--cCCCceEEEeccccchh----------c
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK--DNLV---HH--FRNPRFELIRHDVVEPI----------L  178 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~~---~~--~~~~~~~~~~~D~~~~~----------~  178 (335)
                      .|+||||||+++||++++++|+++|++|+.+++......  ..+.   ..  ....++..+.+|++++.          .
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            357899999999999999999999998666554322211  1111   11  13457889999998761          2


Q ss_pred             cCCCEEEEccCCCCCCCcc----CChhhHHhhHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCcCCC
Q 019794          179 LEVDQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-AKFLLTSTSEVYGDPLEHPQKETYWGN  249 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~----~~~~~~~~~Nv~gt~~ll~~a~----~~~-~r~v~iSS~~v~~~~~~~~~~E~~~~~  249 (335)
                      ..+|++|||||........    +++...+++|+.|+.++++++.    +.+ .++|++||....               
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~---------------  146 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL---------------  146 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT---------------
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc---------------
Confidence            4599999999976554432    3577899999999999988763    344 489999997654               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          250 VNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                       .+......|+.+|++.+.+.+.++.+.   |+++++|.||.|-.+
T Consensus       147 -~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         147 -MGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence             344445789999999999999999874   899999999998654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=2.5e-17  Score=142.70  Aligned_cols=153  Identities=18%  Similarity=0.126  Sum_probs=114.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEecccc-----c-------hhc--cC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-----E-------PIL--LE  180 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-----~-------~~~--~~  180 (335)
                      ++|+||||||+|+||++++++|+++|++|+++++.........         .....+..     +       ..+  .+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS---------VIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEE---------EECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccc---------ceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999988654322111         11111111     1       011  24


Q ss_pred             CCEEEEccCCCCCCCc-----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCC
Q 019794          181 VDQIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNP  252 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~  252 (335)
                      +|++|||||.......     .++++..+++|+.++.++.+++.+.   +.++|++||...+                .+
T Consensus        72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~----------------~~  135 (236)
T d1dhra_          72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL----------------DG  135 (236)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------SC
T ss_pred             ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc----------------CC
Confidence            8999999985332221     2346778999999999999988653   2489999997665                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          253 IGERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       253 ~~~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      ......|+.||++.+.+.+.++.+.     |++++.+.||.+..+
T Consensus       136 ~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~  180 (236)
T d1dhra_         136 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP  180 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC
Confidence            4445789999999999999999763     799999999999775

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=8.3e-18  Score=147.80  Aligned_cols=164  Identities=15%  Similarity=0.029  Sum_probs=126.6

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCCCccc---cccccCCCceEEEeccccchh---------
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLID---RGDEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEPI---------  177 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~---~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~---------  177 (335)
                      .+++|+++||||+++||.+++++|++   +|++|++++|+.+...+.   +.......++..+.+|+.++.         
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            46789999999999999999999986   699999999976543322   222233457889999998751         


Q ss_pred             -------ccCCCEEEEccCCCCCCC---cc----CChhhHHhhHHHHHHHHHHHHHHc----C---CeEEEEecccccCC
Q 019794          178 -------LLEVDQIYHLACPASPVH---YK----YNPVKTIKTNVMGTLNMLGLAKRV----G---AKFLLTSTSEVYGD  236 (335)
Q Consensus       178 -------~~~vD~Vih~A~~~~~~~---~~----~~~~~~~~~Nv~gt~~ll~~a~~~----~---~r~v~iSS~~v~~~  236 (335)
                             ...+|++|||||......   ..    ++|...+++|+.++..+.+++.+.    +   .++|++||...+  
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~--  160 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL--  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT--
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc--
Confidence                   124789999998654322   11    247789999999999999988653    2   279999997664  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh-hCCcEEEEEeCceeCC
Q 019794          237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP  292 (335)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~-~~i~~~ivRp~~v~Gp  292 (335)
                                    .+......|+.+|.+.+.+++.++.+ .|++++.|.||.|..+
T Consensus       161 --------------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         161 --------------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             --------------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence                          34455678999999999999999877 4899999999999764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.3e-17  Score=142.93  Aligned_cols=163  Identities=19%  Similarity=0.204  Sum_probs=123.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------------hccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ..+||+++||||+++||.+++++|+++|++|++++|+.+.......+.  .........|+.+.            ....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCCccccccccccccccccccccccccccc
Confidence            468999999999999999999999999999999999866544333222  23455556655442            2345


Q ss_pred             CCEEEEccCCCCCCCc----------cCChhhHHhhHHHHHHHHHHHHHHc----------C-CeEEEEecccccCCCCC
Q 019794          181 VDQIYHLACPASPVHY----------KYNPVKTIKTNVMGTLNMLGLAKRV----------G-AKFLLTSTSEVYGDPLE  239 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~----------~-~r~v~iSS~~v~~~~~~  239 (335)
                      .|.++++++.......          .+.+...+++|+.++.++.+++.+.          + .++|++||...+     
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-----  154 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF-----  154 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH-----
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc-----
Confidence            8999888765433221          1246788999999999999987542          2 279999997765     


Q ss_pred             CCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                                 .+......|+.+|.+.+.+++.++.+.   |++++.|.||.+..+.
T Consensus       155 -----------~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~  200 (248)
T d2o23a1         155 -----------EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL  200 (248)
T ss_dssp             -----------HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred             -----------cCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence                       233445789999999999999999874   8999999999987654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.73  E-value=1.6e-17  Score=148.66  Aligned_cols=166  Identities=13%  Similarity=0.025  Sum_probs=122.8

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc--CCCceEEEeccccch------------h
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF--RNPRFELIRHDVVEP------------I  177 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~  177 (335)
                      .++++|+++||||+|+||++++++|+++|++|++++|+.....+...+..  ....+..+.+|+.++            .
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            47899999999999999999999999999999999997654333222211  235677888999775            2


Q ss_pred             ccCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHH----c-CC-eEEEEecccccCCCCCCCCCCCcC
Q 019794          178 LLEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKR----V-GA-KFLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       178 ~~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~----~-~~-r~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      +.++|++|||||.........    ++...+.+|+.+...+...+..    . +. .+++++|....             
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~-------------  167 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE-------------  167 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH-------------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh-------------
Confidence            457999999999765544322    4667888899998877665422    1 23 56777765443             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|.+.+.+++.++.+.   ||++++|.||.|..+.
T Consensus       168 ---~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  213 (294)
T d1w6ua_         168 ---TGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  213 (294)
T ss_dssp             ---HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ---hcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence               122334679999999999999999774   8999999999997653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.73  E-value=1.3e-17  Score=144.33  Aligned_cols=151  Identities=21%  Similarity=0.168  Sum_probs=112.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc------------h--hccCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE------------P--ILLEVD  182 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~------------~--~~~~vD  182 (335)
                      .|||||||+|+||++++++|+++|++|++++|+........         ..+.+|..+            .  ....+|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN---------ILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE---------EECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccccc---------ceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            47999999999999999999999999999999754322211         112222211            1  235699


Q ss_pred             EEEEccCCCCCCC-c----cCChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCcCCCCCCCC
Q 019794          183 QIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG  254 (335)
Q Consensus       183 ~Vih~A~~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~  254 (335)
                      +||||||...... .    .+.++..+++|+.++..+++++...   +.++|++||...+                .+..
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~----------------~~~~  137 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM----------------GPTP  137 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG----------------SCCT
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc----------------CCcc
Confidence            9999999643322 1    1245678999999999999988664   2489999997655                3444


Q ss_pred             CCChHHHHHHHHHHHHHHHHhhh-----CCcEEEEEeCceeCC
Q 019794          255 ERSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (335)
Q Consensus       255 ~~~~Y~~sK~~~E~l~~~~a~~~-----~i~~~ivRp~~v~Gp  292 (335)
                      ....|+.+|.+.+.+++.++.+.     +++++.+.||.+..+
T Consensus       138 ~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~  180 (235)
T d1ooea_         138 SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP  180 (235)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred             cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence            55789999999999999998763     788999999998764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.72  E-value=4.5e-17  Score=142.94  Aligned_cols=163  Identities=18%  Similarity=0.225  Sum_probs=120.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcc--ccccc--cCCCceEEEeccccchh-----------c
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKD--NLVHH--FRNPRFELIRHDVVEPI-----------L  178 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~--~~~~~--~~~~~~~~~~~D~~~~~-----------~  178 (335)
                      .+.+||||||+|+||.+++++|+++|+ +|+++.|+......  .....  ....++.++.+|+.++.           .
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            345999999999999999999999998 68888886432211  11111  12357889999998751           1


Q ss_pred             cCCCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCC
Q 019794          179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPI  253 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~  253 (335)
                      ..+|.|||++|........+    ++...+++|+.|+.++.+++...+. ++|++||....                .+.
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~----------------~g~  151 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASA----------------FGA  151 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHH----------------TCC
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhc----------------cCC
Confidence            25899999999766554332    3567889999999999998877665 89999997654                233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHhhhCCcEEEEEeCceeCCCC
Q 019794          254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (335)
Q Consensus       254 ~~~~~Y~~sK~~~E~l~~~~a~~~~i~~~ivRp~~v~Gp~~  294 (335)
                      .....|+.+|...+.+.+.++. .|++++.|.||.+.++++
T Consensus       152 ~~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         152 PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGM  191 (259)
T ss_dssp             TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC----
T ss_pred             cccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCcc
Confidence            3446799999999999888765 599999999999877653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2e-17  Score=146.61  Aligned_cols=178  Identities=15%  Similarity=0.021  Sum_probs=124.0

Q ss_pred             CCeE-EEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hccC
Q 019794          116 RLRI-VVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------ILLE  180 (335)
Q Consensus       116 ~~~v-lVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~  180 (335)
                      ||+| +||||+++||.+++++|+++ |++|++.+|+.+..++...+. ....++.++.+|+.+.            .+..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            5565 99999999999999999986 899999999866443322221 1235678899999775            2356


Q ss_pred             CCEEEEccCCCCCCCccC----ChhhHHhhHHHHHHHHHHHHHHc---CCeEEEEecccccCC-CCCC----------CC
Q 019794          181 VDQIYHLACPASPVHYKY----NPVKTIKTNVMGTLNMLGLAKRV---GAKFLLTSTSEVYGD-PLEH----------PQ  242 (335)
Q Consensus       181 vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~gt~~ll~~a~~~---~~r~v~iSS~~v~~~-~~~~----------~~  242 (335)
                      +|++|||||........+    +++..+++|+.|+..+++++...   ..++|++||...... ....          ..
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            999999999765544332    46678999999999999998653   238999999643210 0000          00


Q ss_pred             CC--------------CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh-------CCcEEEEEeCceeCCC
Q 019794          243 KE--------------TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA-------GVEVRIARIFNTYGPR  293 (335)
Q Consensus       243 ~E--------------~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~-------~i~~~ivRp~~v~Gp~  293 (335)
                      .+              .......+..+...|+.||.....+.+.++.+.       +++++.+.||.|-.+-
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence            00              000001223345689999999999888776553       8999999999987653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=2e-16  Score=138.07  Aligned_cols=167  Identities=13%  Similarity=0.005  Sum_probs=117.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccch------------hcc-
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------------ILL-  179 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~-  179 (335)
                      ++|+||||||+++||.+++++|+++|+  .|++..|+.+...+ +.+ ....++.++.+|+.++            .+. 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~-l~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKS-IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHT-CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH-HHH-hhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            347999999999999999999999996  68888887654332 222 2345789999999775            112 


Q ss_pred             -CCCEEEEccCCCCCCC-c----cCChhhHHhhHHHHHHHHHHHHHH----c------------CCeEEEEecccccCCC
Q 019794          180 -EVDQIYHLACPASPVH-Y----KYNPVKTIKTNVMGTLNMLGLAKR----V------------GAKFLLTSTSEVYGDP  237 (335)
Q Consensus       180 -~vD~Vih~A~~~~~~~-~----~~~~~~~~~~Nv~gt~~ll~~a~~----~------------~~r~v~iSS~~v~~~~  237 (335)
                       ++|++|||||...... .    .+++++.+++|+.|+..+.+++..    .            ..+++.+|+...+-..
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             4999999999754322 1    124678999999999999887532    1            1257777775443111


Q ss_pred             CCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          238 LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                      ...         ..+..+...|+.||++...+++.++.+.   |++++.+.||.|-.+
T Consensus       160 ~~~---------~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~  208 (250)
T d1yo6a1         160 NTS---------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN  208 (250)
T ss_dssp             CCS---------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred             Ccc---------cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence            000         0122334579999999999999999764   899999999998543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.66  E-value=6.8e-17  Score=147.66  Aligned_cols=146  Identities=14%  Similarity=0.062  Sum_probs=108.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      +.|+|+|||||||||++|+++|+++|++|+++.|+.++....  .......++++.+|+.+.      ++.++|.++++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            457999999999999999999999999999999976543321  122345789999998764      467899998875


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHH
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  267 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (335)
                      ...            ...|+..+.+++++|++.|+ ++++.||......              ........|..+|...+
T Consensus        80 ~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~--------------~~~~~~~~~~~~k~~~~  133 (350)
T d1xgka_          80 TSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL--------------YGPWPAVPMWAPKFTVE  133 (350)
T ss_dssp             CST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG--------------TSSCCCCTTTHHHHHHH
T ss_pred             ccc------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc--------------CCcccchhhhhhHHHHH
Confidence            321            13577888999999999997 8888888644321              11122345778888777


Q ss_pred             HHHHHHHhhhCCcEEEEEeCceeCC
Q 019794          268 TLTMDYHRGAGVEVRIARIFNTYGP  292 (335)
Q Consensus       268 ~l~~~~a~~~~i~~~ivRp~~v~Gp  292 (335)
                      ..+.    +.+++++++|++.+++.
T Consensus       134 ~~~~----~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         134 NYVR----QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             HHHH----TSSSCEEEEEECEEGGG
T ss_pred             HHHH----hhccCceeeeeceeecc
Confidence            7654    45899999999998875

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=3.5e-16  Score=137.02  Aligned_cols=163  Identities=14%  Similarity=0.020  Sum_probs=118.3

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|+||||||+|  +||+++++.|+++|++|++.+|++.... ...+. ...........|+.+.            ..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            6789999999998  8999999999999999999999754222 22111 1223445555565443            33


Q ss_pred             cCCCEEEEccCCCCCCCcc---------CChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCc
Q 019794          179 LEVDQIYHLACPASPVHYK---------YNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTSTSEVYGDPLEHPQKETY  246 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iSS~~v~~~~~~~~~~E~~  246 (335)
                      ..+|++||+|+........         +.+...+.+|+.+...+++.+...-   ..+|++||....            
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------------  149 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------  149 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc------------
Confidence            5689999999865443321         1245577788888888888776532   258888886543            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          247 WGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                          .+......|+.+|.+.+.+++.++.+.   ||+++.|+||.|..+.
T Consensus       150 ----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~  195 (258)
T d1qsga_         150 ----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  195 (258)
T ss_dssp             ----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred             ----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence                233345789999999999999999885   7999999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.60  E-value=1.5e-15  Score=131.30  Aligned_cols=150  Identities=21%  Similarity=0.182  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----------hccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----------ILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~~vD~V  184 (335)
                      .|++|||||+++||++++++|+++|++|++++|+.+..           +.....+|+.+.           .....+.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-----------cceEeeccccchhhhHHHHHhhhccccccch
Confidence            37999999999999999999999999999999875422           233445555433           12334555


Q ss_pred             EEccCCCCCCC--------ccCChhhHHhhHHHHHHHHHHHHHHc----------C-CeEEEEecccccCCCCCCCCCCC
Q 019794          185 YHLACPASPVH--------YKYNPVKTIKTNVMGTLNMLGLAKRV----------G-AKFLLTSTSEVYGDPLEHPQKET  245 (335)
Q Consensus       185 ih~A~~~~~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~----------~-~r~v~iSS~~v~~~~~~~~~~E~  245 (335)
                      +++++......        ..+.+...+++|+.+..++++.+...          + .++|++||...+           
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-----------  138 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-----------  138 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-----------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc-----------
Confidence            55555322211        11245678999999999888876432          2 279999997665           


Q ss_pred             cCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCC
Q 019794          246 YWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (335)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp  292 (335)
                           .+......|+.+|.+.+.+++.++.+   +||+++.|.||.|..+
T Consensus       139 -----~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~  183 (241)
T d1uaya_         139 -----EGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP  183 (241)
T ss_dssp             -----HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred             -----cCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence                 23344578999999999999999987   4899999999998654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.57  E-value=2.3e-14  Score=127.64  Aligned_cols=193  Identities=10%  Similarity=-0.021  Sum_probs=121.7

Q ss_pred             CCCCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCC------------ccccccccCCC---ceEEEeccc
Q 019794          111 GIGRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGR------------KDNLVHHFRNP---RFELIRHDV  173 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~------------~~~~~~~~~~~---~~~~~~~D~  173 (335)
                      .+++++|++|||||+|  +||++++++|+++|++|++.+|.....            ...........   ++..+..++
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            3567999999999987  899999999999999999998853210            00000000000   111122111


Q ss_pred             c------------------------------chhccCCCEEEEccCCCCC--CCc----cCChhhHHhhHHHHHHHHHHH
Q 019794          174 V------------------------------EPILLEVDQIYHLACPASP--VHY----KYNPVKTIKTNVMGTLNMLGL  217 (335)
Q Consensus       174 ~------------------------------~~~~~~vD~Vih~A~~~~~--~~~----~~~~~~~~~~Nv~gt~~ll~~  217 (335)
                      .                              .+.+.++|++|||||....  ...    .++|...+++|+.+...++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence            0                              0124579999999986432  111    235778999999999999998


Q ss_pred             HHHcCC---eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCcee
Q 019794          218 AKRVGA---KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTY  290 (335)
Q Consensus       218 a~~~~~---r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~  290 (335)
                      +.....   ..+.+++.....               ........|..+|...+.+++.++.+    +|++++.|.||.+.
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~---------------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~  227 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASER---------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTS---------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHHhhcCCcceeeeehhhcc---------------cccccccceecccccccccccccchhccccceEEeccccccccc
Confidence            865432   455555543321               11233357999999999888876654    48999999999998


Q ss_pred             CCCCCCCCcchHHHHHHHHHhCCCeEEecC
Q 019794          291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGD  320 (335)
Q Consensus       291 Gp~~~~~~~~~i~~~~~~~~~~~~~~~~g~  320 (335)
                      .+...  .......+.+...+..|+..++.
T Consensus       228 T~~~~--~~~~~~~~~~~~~~~~PlgR~~~  255 (297)
T d1d7oa_         228 SRAAK--AIGFIDTMIEYSYNNAPIQKTLT  255 (297)
T ss_dssp             CCCSS--CCSHHHHHHHHHHHHSSSCCCBC
T ss_pred             chhhh--hccCCHHHHHHHHhCCCCCCCCC
Confidence            77532  12233445555555444433333

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.57  E-value=1.3e-14  Score=127.84  Aligned_cols=163  Identities=11%  Similarity=-0.029  Sum_probs=106.6

Q ss_pred             CCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccc-cCCCceEEEeccccch------------hc
Q 019794          114 RRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH-FRNPRFELIRHDVVEP------------IL  178 (335)
Q Consensus       114 ~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~  178 (335)
                      +++|++|||||+|  +||.+++++|+++|++|++++|++...+ ...+. .......+...|+.++            .+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            6799999999887  7999999999999999999999743221 11111 1123455677777654            34


Q ss_pred             cCCCEEEEccCCCCCCCccC----ChhhHHhhHHH----HHHHHHHHHHHcC--Ce-EEEEecccccCCCCCCCCCCCcC
Q 019794          179 LEVDQIYHLACPASPVHYKY----NPVKTIKTNVM----GTLNMLGLAKRVG--AK-FLLTSTSEVYGDPLEHPQKETYW  247 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~~----~~~~~~~~Nv~----gt~~ll~~a~~~~--~r-~v~iSS~~v~~~~~~~~~~E~~~  247 (335)
                      ..+|++|||+|.........    ..+..+..+..    ....+.....+..  .. ++++|+....             
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-------------  148 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST-------------  148 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-------------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccc-------------
Confidence            67999999999654432211    22222222222    2333333332222  23 5555555443             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          248 GNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                         .+......|+.+|.+.+.+++.++.+.   |++++++.||.+..+.
T Consensus       149 ---~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~  194 (274)
T d2pd4a1         149 ---KYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA  194 (274)
T ss_dssp             ---SBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             ---cccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcc
Confidence               223334679999999999999988774   8999999999987754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.57  E-value=1.4e-14  Score=128.17  Aligned_cols=156  Identities=15%  Similarity=0.052  Sum_probs=107.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccccc---CCCceE-----------------EEeccccch-
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHF---RNPRFE-----------------LIRHDVVEP-  176 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~-----------------~~~~D~~~~-  176 (335)
                      +++||||+++||++++++|+++|++|++.++......+.+...+   ......                 ...+|+.+. 
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            78999999999999999999999999998876443222211111   112222                 233445433 


Q ss_pred             -----------hccCCCEEEEccCCCCCCCccC----C--------------hhhHHhhHHHHHHHHHHHHHHc------
Q 019794          177 -----------ILLEVDQIYHLACPASPVHYKY----N--------------PVKTIKTNVMGTLNMLGLAKRV------  221 (335)
Q Consensus       177 -----------~~~~vD~Vih~A~~~~~~~~~~----~--------------~~~~~~~Nv~gt~~ll~~a~~~------  221 (335)
                                 .+..+|++|||||...+....+    +              +...+.+|+.++..+.+++.+.      
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence                       2467999999999765443221    1              2246889999999988876432      


Q ss_pred             ---C-C-eEEEEecccccCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCce
Q 019794          222 ---G-A-KFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (335)
Q Consensus       222 ---~-~-r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v  289 (335)
                         + . ++|+++|....                .+......|+.+|.+.+.+++.++.++   |++++.|.||.+
T Consensus       164 ~~~~~~~~ii~~~s~~~~----------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         164 KHRGTNYSIINMVDAMTN----------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             GGSCSCEEEEEECCTTTT----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HhcCCCCccccccccccc----------------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence               1 2 57777765433                334445789999999999999999874   899999999964

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.56  E-value=1.3e-14  Score=127.49  Aligned_cols=163  Identities=12%  Similarity=0.056  Sum_probs=113.8

Q ss_pred             CCCCCeEEEEcCCc--hhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch--------------
Q 019794          113 GRRRLRIVVTGGAG--FVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------------  176 (335)
Q Consensus       113 ~~~~~~vlVTGatG--~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------------  176 (335)
                      .+++|++|||||+|  +||.+++++|+++|++|++.+|+.....+.+.+.. ..+...+.+|+.++              
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhcc
Confidence            36789999999654  69999999999999999999987654333333332 34566788888764              


Q ss_pred             -hccCCCEEEEccCCCCCCC-----c-c---CChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCC
Q 019794          177 -ILLEVDQIYHLACPASPVH-----Y-K---YNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSEVYGDPLEHPQKE  244 (335)
Q Consensus       177 -~~~~vD~Vih~A~~~~~~~-----~-~---~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iSS~~v~~~~~~~~~~E  244 (335)
                       .+..+|+++||||......     . +   ..+...+.+|+.........+.....  .+++++|....          
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~----------  151 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS----------  151 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS----------
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc----------
Confidence             1245899999998643221     1 1   13345667777777766666655432  34444444332          


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCC
Q 019794          245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (335)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp  292 (335)
                            .+......|+.+|.+.+.+++.++.+.   |++++.|.||.|-.+
T Consensus       152 ------~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~  196 (268)
T d2h7ma1         152 ------RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  196 (268)
T ss_dssp             ------SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ------ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence                  223334689999999999999999874   899999999988653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.53  E-value=4.7e-14  Score=123.50  Aligned_cols=160  Identities=18%  Similarity=0.141  Sum_probs=109.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccc---cCCCceEEEeccccch----------------hc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHH---FRNPRFELIRHDVVEP----------------IL  178 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~----------------~~  178 (335)
                      ++|||||+++||++++++|+++|++|++++|+.+...+.+...   ...........|..+.                .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999765433322211   1223444444433221                34


Q ss_pred             cCCCEEEEccCCCCCCCcc---------------CChhhHHhhHHHHHHHHHHHHHHcC---------C-eEEEEecccc
Q 019794          179 LEVDQIYHLACPASPVHYK---------------YNPVKTIKTNVMGTLNMLGLAKRVG---------A-KFLLTSTSEV  233 (335)
Q Consensus       179 ~~vD~Vih~A~~~~~~~~~---------------~~~~~~~~~Nv~gt~~ll~~a~~~~---------~-r~v~iSS~~v  233 (335)
                      ..+|++|||||...+....               ..+...+..|+.+...........-         . .++.+++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            6799999999975543321               1133456667776666665544321         1 4555666544


Q ss_pred             cCCCCCCCCCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHHhh---hCCcEEEEEeCceeCCC
Q 019794          234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (335)
Q Consensus       234 ~~~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~l~~~~a~~---~~i~~~ivRp~~v~Gp~  293 (335)
                      .                .+......|+.+|.+.+.+++.++.+   .|++++.|.||.+..+.
T Consensus       163 ~----------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~  209 (266)
T d1mxha_         163 D----------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP  209 (266)
T ss_dssp             G----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCS
T ss_pred             c----------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccc
Confidence            3                33445578999999999999999987   48999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.51  E-value=1.5e-13  Score=124.28  Aligned_cols=160  Identities=8%  Similarity=0.026  Sum_probs=109.4

Q ss_pred             CCeEEEEc--CCchhHHHHHHHHHhCCCeEEEEecCCCCCc-----------cc-ccccc-CCCceEEEecc--------
Q 019794          116 RLRIVVTG--GAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-----------DN-LVHHF-RNPRFELIRHD--------  172 (335)
Q Consensus       116 ~~~vlVTG--atG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-----------~~-~~~~~-~~~~~~~~~~D--------  172 (335)
                      +|++||||  ++.+||++|+++|+++|++|++.++......           .. ..... .........+|        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57999999  4569999999999999999999887543110           00 00000 00111222222        


Q ss_pred             ------------ccc------------hhccCCCEEEEccCCCCCCC------ccCChhhHHhhHHHHHHHHHHHHHHc-
Q 019794          173 ------------VVE------------PILLEVDQIYHLACPASPVH------YKYNPVKTIKTNVMGTLNMLGLAKRV-  221 (335)
Q Consensus       173 ------------~~~------------~~~~~vD~Vih~A~~~~~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~~-  221 (335)
                                  +.+            +.+.++|++|||||......      ..++|...+++|+.+...+++.+.+. 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                        111            13467999999998654321      12357789999999999999988764 


Q ss_pred             --CCeEEEEecccccCCCCCCCCCCCcCCCCCCCC-CCChHHHHHHHHHHHHHHHHhh----hCCcEEEEEeCceeC
Q 019794          222 --GAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYG  291 (335)
Q Consensus       222 --~~r~v~iSS~~v~~~~~~~~~~E~~~~~~~~~~-~~~~Y~~sK~~~E~l~~~~a~~----~~i~~~ivRp~~v~G  291 (335)
                        +.++|.+||.....                +.. ....|+.+|.+.+.+++.++.+    +||+++.|.||.|--
T Consensus       162 ~~~GsIv~iss~~~~~----------------~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHASQK----------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehhcc----------------cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence              23799998865531                111 2356999999999999999865    489999999998754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.45  E-value=2.3e-14  Score=124.96  Aligned_cols=172  Identities=15%  Similarity=0.040  Sum_probs=102.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVH  195 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~  195 (335)
                      ||+|+||||+++||++++++|+++|++|++++|+.......+...   ........|...+....+|+++++||....  
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~--   75 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTA---EGRKQAIADVLAKCSKGMDGLVLCAGLGPQ--   75 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSH---HHHHHHHHHHHTTCTTCCSEEEECCCCCTT--
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCH---HHHHHHHHHHHHHhCCCCcEEEEcCCCCCc--
Confidence            689999999999999999999999999999998644322211110   001111112222334569999999985432  


Q ss_pred             ccCChhhHHhhHHHHHHHHHHHHHH----cCC-eEEEEecccccC-CCCCCCCCC-C----------cCCCCCCCCCCCh
Q 019794          196 YKYNPVKTIKTNVMGTLNMLGLAKR----VGA-KFLLTSTSEVYG-DPLEHPQKE-T----------YWGNVNPIGERSC  258 (335)
Q Consensus       196 ~~~~~~~~~~~Nv~gt~~ll~~a~~----~~~-r~v~iSS~~v~~-~~~~~~~~E-~----------~~~~~~~~~~~~~  258 (335)
                       ...+.....+|..+...+.+....    ... ....+++..... .....+... .          .............
T Consensus        76 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~  154 (257)
T d1fjha_          76 -TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA  154 (257)
T ss_dssp             -CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHH
Confidence             345666778888888877766433    222 455555432211 100000000 0          0000001111235


Q ss_pred             HHHHHHHHHHHHHHHHhhh---CCcEEEEEeCceeCCC
Q 019794          259 YDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (335)
Q Consensus       259 Y~~sK~~~E~l~~~~a~~~---~i~~~ivRp~~v~Gp~  293 (335)
                      |+.+|.+.+.+.+.++.++   ||+++.|.||.+-.+.
T Consensus       155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~  192 (257)
T d1fjha_         155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             HHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence            9999999999999999774   8999999999996653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.21  E-value=8.9e-13  Score=109.83  Aligned_cols=103  Identities=12%  Similarity=0.121  Sum_probs=68.9

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-----hhccCCCEEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILLEVDQIY  185 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~vD~Vi  185 (335)
                      ..+.++|+|+||||+|+||+.+++.|+++|++|++++|+.+...+..........+.....|+.+     +.+.++|+||
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            44678999999999999999999999999999999999865443222221111233344555544     3678899999


Q ss_pred             EccCCCCCCCccCChhhHHhhHHHHHHH
Q 019794          186 HLACPASPVHYKYNPVKTIKTNVMGTLN  213 (335)
Q Consensus       186 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~  213 (335)
                      ||||........++|...+++|+.+..+
T Consensus        98 n~Ag~g~~~~~~e~~~~~~~~nv~~~~~  125 (191)
T d1luaa1          98 TAGAIGLELLPQAAWQNESSIEIVADYN  125 (191)
T ss_dssp             ECCCTTCCCBCHHHHHTCTTCCEEEECC
T ss_pred             ecCccccccCCHHHHHhhhcceeehhHh
Confidence            9998643333333444445555444433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.28  E-value=3.7e-06  Score=65.42  Aligned_cols=108  Identities=13%  Similarity=0.037  Sum_probs=75.0

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCC---Cce-EEEeccccchhccCCCEEEEccCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRN---PRF-ELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~-~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      ||.|+||+|.+|+.++..|..+|.  ++++++....  +....+....   ... ..+..+-..+.+.++|+||.+||..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~   79 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--chhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence            799999999999999999998875  7888886532  1111111111   111 2333444446789999999999842


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                        .....+....++.|+...+.+++.+.+.+.  .++.+|
T Consensus        80 --~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          80 --RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             --CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             --CCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence              233346677899999999999999999875  344444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.26  E-value=7.7e-06  Score=63.63  Aligned_cols=110  Identities=15%  Similarity=0.129  Sum_probs=75.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCc-----cccccc--cCCCceEE-EeccccchhccCCCEEEE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRK-----DNLVHH--FRNPRFEL-IRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~-----~~~~~~--~~~~~~~~-~~~D~~~~~~~~vD~Vih  186 (335)
                      |||.|+||+|.+|+.++..|+.++.  ++.++++.+...+     ..+.+.  ......+. +..+-..+.+.++|+||-
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            6899999999999999999999884  8999988643211     111111  11122222 222223457889999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEE
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT  228 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~i  228 (335)
                      +||.  +.....+-...++.|..-...++....+.+...|++
T Consensus        81 tAG~--~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iiv  120 (145)
T d1hyea1          81 TSGV--PRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFV  120 (145)
T ss_dssp             CCSC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred             eccc--ccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEE
Confidence            9984  233334567789999999999999998886543433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=4.3e-06  Score=65.10  Aligned_cols=110  Identities=15%  Similarity=0.081  Sum_probs=73.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-CC--CeEEEEecCCCCCccc---cccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLID-RG--DEVIVIDNFFTGRKDN---LVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~-~g--~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.|+|++|.||++++-.|.. .+  .++.+++..+. ....   +.+.........+..+-..+.+.+.|+||.+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence            6899999999999999988754 34  58888886432 2211   1111111223333333334578899999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .  .....+-.+.++.|..-.+.+.+...+.+.  .+|.+|
T Consensus        80 ~--~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          80 R--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             C--CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             c--CCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            3  233346677889999999999999998875  355555

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=6.2e-06  Score=64.21  Aligned_cols=97  Identities=14%  Similarity=0.086  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC----eEEEEecCCCCCccccccccCCCceEEEeccc-cchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD----EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-VEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~vD~Vih~A~~  190 (335)
                      ||+|.|.||||++|+.+++.|+++..    +++++..+....+. ...  ....  ....++ ....+.++|++|.+++ 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~-~~~--~~~~--~~~~~~~~~~~~~~~DivF~a~~-   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA-PSF--GGTT--GTLQDAFDLEALKALDIIVTCQG-   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC-CGG--GTCC--CBCEETTCHHHHHTCSEEEECSC-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc-ccc--cCCc--eeeecccchhhhhcCcEEEEecC-
Confidence            67999999999999999998887642    66666554332221 111  1111  111222 2235789999998773 


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                                       -.-...+...+.+.|.+.+.++.++.|-
T Consensus        75 -----------------~~~s~~~~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          75 -----------------GDYTNEIYPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred             -----------------chHHHHhhHHHHhcCCCeecccCCcccc
Confidence                             1123456667777887766666665553

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.16  E-value=6.6e-06  Score=64.32  Aligned_cols=111  Identities=21%  Similarity=0.259  Sum_probs=76.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcccc---ccc--cCCCceEEEeccccchhccCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNL---VHH--FRNPRFELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~---~~~--~~~~~~~~~~~D~~~~~~~~vD~Vih  186 (335)
                      ..++||.|.|| |++|+.++..|+..+.  +++++++.++..+...   .+.  +......+...|.  +.+.++|+||.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--DDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--GGTTTCSEEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--HHhccceeEEE
Confidence            34569999996 9999999999999875  8999987654322211   111  1122334444443  56899999999


Q ss_pred             ccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          187 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       187 ~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      +||..  ........+.+..|..-...+++...+.+.  .++.+|
T Consensus        81 tag~~--~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          81 CAGAN--QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CCSCC--CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ecccc--cccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            98843  233345567788999999999999888875  455544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.13  E-value=5.4e-06  Score=64.66  Aligned_cols=111  Identities=14%  Similarity=0.170  Sum_probs=71.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCccccccc----cCCCceEEEeccccchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHH----FRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      +.|||.|.|+ |++|..++..|+.+|  .+|+++|+++...+....+.    ...........|.  +.+.++|+||.+|
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--~~~~~adivvita   80 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--SDCKDADLVVITA   80 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--HHhccccEEEEec
Confidence            3569999995 999999999999987  48999998754322111110    1112233444554  4578999999999


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      |...  ....+....+..|+.-...+++...+.+. -++.+-|
T Consensus        81 g~~~--~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          81 GAPQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             CC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             cccc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            8432  22345567788999999999999998875 3444433

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.04  E-value=2.4e-05  Score=60.52  Aligned_cols=108  Identities=19%  Similarity=0.137  Sum_probs=71.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCcccccccc---C-CCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHF---R-NPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +||.|.|+ |.+|+.++..|+.++.  ++++++++.+..+....+..   . ........+  ..+.+.++|+|+-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~~adivvitag~   78 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG--DYSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CGGGGTTCSEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC--cHHHhCCCceEEEeccc
Confidence            47889997 9999999999999875  89999987765433222211   1 122333322  34578999999999984


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      .  .....+....+..|+.-...+++.+.+.+.  .++.+|
T Consensus        79 ~--~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          79 N--RKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             c--cCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            3  223345677889999999999999998875  344444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.00  E-value=2.5e-05  Score=60.46  Aligned_cols=103  Identities=12%  Similarity=0.057  Sum_probs=72.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCCCCcccccccc-----CCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFTGRKDNLVHHF-----RNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |||.|+|| |.+|+.++..|+..+  .++.+++.++...........     ......+...+. .+.+.++|+|+-+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            58999996 999999999999987  489999887654332211111     112333332222 356899999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      ...  ....+-...++.|..-...+++...+.+.
T Consensus        79 ~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p  110 (142)
T d1guza1          79 LPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSK  110 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             cCC--CCCCchHHHHHHHHHHHHHHHHHhhccCC
Confidence            532  23345667889999999999999988775

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.00  E-value=2.9e-05  Score=60.90  Aligned_cols=117  Identities=14%  Similarity=0.095  Sum_probs=77.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccc-----cCCCceEEEeccccchhccCCCEEEE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHH-----FRNPRFELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~vD~Vih  186 (335)
                      ..+.+||.|.|+ |.+|+.++..|...+. ++++++.++...+......     ...........+..++++.++|+|+-
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvi   82 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV   82 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEE
Confidence            345679999997 9999999988888775 8888887654332221111     11123333334444567899999999


Q ss_pred             ccCCCCCCC---ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          187 LACPASPVH---YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       187 ~A~~~~~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      +||......   ....-...+..|..-...+++.+.+.+. -++.+-|
T Consensus        83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            998533221   1124566788999999999999998886 3444433

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.95  E-value=2.5e-05  Score=62.67  Aligned_cols=112  Identities=16%  Similarity=0.105  Sum_probs=73.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC---CC----eEEEEecCCCCCc-cccc-ccc--C-CCceEEEeccccchhccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR---GD----EVIVIDNFFTGRK-DNLV-HHF--R-NPRFELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~---g~----~V~~~~r~~~~~~-~~~~-~~~--~-~~~~~~~~~D~~~~~~~~vD~  183 (335)
                      ..+|.||||+|.||..++-.|+..   |.    .+..++....... .... +..  . ...-..+..+-..+.+.++|+
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDv  103 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  103 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCce
Confidence            348999999999999999999874   22    3444444322111 1111 111  1 112234445555678899999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC---CeEEEEe
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG---AKFLLTS  229 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~r~v~iS  229 (335)
                      ||-.||.  +........+.++.|..-...+.++..+..   ++++.+|
T Consensus       104 Vvi~ag~--~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         104 ALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             EEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEeecc--CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            9999984  344456778899999999999999998863   2455554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.95  E-value=2.8e-05  Score=61.31  Aligned_cols=110  Identities=14%  Similarity=0.111  Sum_probs=75.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc-----cCCCceEEEeccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH-----FRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      +.+||.|.|+ |.+|+.++..|+.+|.  ++++++++++..+....+.     +..........|  .+.+.++|+||..
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d--~~~~~~adiVVit   95 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD--YSVTANSKIVVVT   95 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS--GGGGTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc--hhhcccccEEEEe
Confidence            3459999996 9999999999999986  8999987644332221111     111122222223  3568999999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||...  ....+....++.|+.-.+.++...++.+.  -++.+|
T Consensus        96 Ag~~~--~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          96 AGVRQ--QEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCcc--ccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            98532  23345667889999999999999988875  355554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.95  E-value=2.9e-05  Score=59.96  Aligned_cols=108  Identities=16%  Similarity=0.032  Sum_probs=74.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCC--Ccc---cccccc-CCCceEEEeccccchhccCCCEEEEccC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTG--RKD---NLVHHF-RNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~--~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ||.|+||+|.||+.++..|+.++.  ++++++.....  .+.   .+.+.. -.....+...|  .+.+.++|+|+-+||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~--~~~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC--HHHhhhcCEEEEecc
Confidence            799999999999999999999986  78888753221  111   111111 12334444444  345789999999998


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ..  .....+-.+.++.|..-.+.+++..++.+.  .++.+|
T Consensus        80 ~~--~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          80 IP--RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             CC--CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             cc--cccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            42  233346678899999999999999998875  344444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.92  E-value=4.5e-05  Score=56.43  Aligned_cols=100  Identities=15%  Similarity=0.096  Sum_probs=72.1

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |.-.+.++++|+|.|| |.+|..-++.|++.|++|++++.....   ..........+.+......+..+.+++.|+-+.
T Consensus         5 Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~---~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at   80 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP---QFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT   80 (113)
T ss_dssp             EEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH---HHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred             ceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh---HHHHHHhcCCceeeccCCCHHHhCCCcEEeecC
Confidence            5566788999999995 999999999999999999998764332   222333456788888888888899999998654


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                      +         +.        .-...+.+.|++.+ .+|++..
T Consensus        81 ~---------d~--------~~n~~i~~~a~~~~-ilVNv~D  104 (113)
T d1pjqa1          81 D---------DD--------TVNQRVSDAAESRR-IFCNVVD  104 (113)
T ss_dssp             S---------CH--------HHHHHHHHHHHHTT-CEEEETT
T ss_pred             C---------CH--------HHHHHHHHHHHHcC-CEEEeCC
Confidence            2         11        11235677777765 4566543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=4.6e-05  Score=54.30  Aligned_cols=91  Identities=21%  Similarity=0.197  Sum_probs=63.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      ++++|+|+|.|. |-.|.++++.|.++|++|++.+..........   +. ....+......+..+.++|.||-.-|...
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDK---LP-EAVERHTGSLNDEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGG---SC-TTSCEEESBCCHHHHHHCSEEEECTTSCT
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHH---Hh-hccceeecccchhhhccCCEEEECCCCCC
Confidence            467899999997 77899999999999999999998654332211   11 23334444444556678999998776421


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEE
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFL  226 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v  226 (335)
                           .+             .+++.|++.|+.+|
T Consensus        77 -----~~-------------~~~~~a~~~gi~ii   92 (93)
T d2jfga1          77 -----AH-------------PSLSAAADAGIEIV   92 (93)
T ss_dssp             -----TS-------------HHHHHHHHTTCEEE
T ss_pred             -----CC-------------HHHHHHHHcCCCeE
Confidence                 11             46777778777654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.89  E-value=3.8e-05  Score=59.52  Aligned_cols=94  Identities=19%  Similarity=0.131  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      .++|.|.||||++|..+++.|.++++   ++..+...... .+...    ...-++...+..+..+.++|++|.+++.  
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~----~~~~~~~~~~~~~~~~~~~d~vf~a~p~--   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----FAESSLRVGDVDSFDFSSVGLAFFAAAA--   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----ETTEEEECEEGGGCCGGGCSEEEECSCH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Cccee----eccccchhccchhhhhccceEEEecCCc--
Confidence            46899999999999999999976654   66665433221 11111    1122344445555567889999976631  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE  232 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~  232 (335)
                                      .....+...+.+.|.++|-.|+..
T Consensus        75 ----------------~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 ----------------EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ----------------chhhhhccccccCCceEEeechhh
Confidence                            123345566667787888777754

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.85  E-value=5.5e-05  Score=58.46  Aligned_cols=103  Identities=19%  Similarity=0.170  Sum_probs=71.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccc---ccccc-CCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDN---LVHHF-RNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .||.|.|+ |.+|++++..|+.++.  +++++++++...+..   +.+-. ......+...+.. +.+.++|+||-+||.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~daDvVVitaG~   79 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGP   79 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCCcEEEEeccc
Confidence            37999996 9999999999999885  899998765433221   11110 0112333333333 457899999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA  223 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~  223 (335)
                      .  .....+..+.+..|..-...++...++.+.
T Consensus        80 ~--~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p  110 (143)
T d1llda1          80 R--QKPGQSRLELVGATVNILKAIMPNLVKVAP  110 (143)
T ss_dssp             C--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             c--cCCCCchhhhhhhhHHHHHHHHHHHHhhCC
Confidence            3  233355677889999999999999988875

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.84  E-value=5.1e-05  Score=58.49  Aligned_cols=107  Identities=16%  Similarity=0.116  Sum_probs=72.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc---c-CCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH---F-RNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.|.|+ |.+|+.++..|+.++.  ++++++.++...+....+.   . -.........|  .+.+.++|+||-+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~--~~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc--HHHhcCCCEEEEeccc
Confidence            58999996 9999999999988874  8999987654322211111   0 01233444443  3468999999999985


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEE
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLT  228 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~i  228 (335)
                      ..  .......+.+..|..-...+++...+.+. -++++
T Consensus        78 ~~--~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             cc--CCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence            32  22345567888999999999999988875 34443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.83  E-value=3.8e-05  Score=59.37  Aligned_cols=110  Identities=14%  Similarity=0.011  Sum_probs=73.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc---c--CCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH---F--RNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |||.|.|+ |.+|..++..|+.+|.  ++++++.+++..+....+.   .  -.....+...+. .+.+.++|+||-.||
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~adiVvitag   78 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-HHHhccccEEEEecc
Confidence            68999996 9999999999998874  8999987654322211111   0  111222332222 357899999999988


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEec
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTST  230 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iSS  230 (335)
                      ..  .....+..+.+..|..-...+++..++.+. -++++-|
T Consensus        79 ~~--~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          79 LA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             CC--CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cc--CCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            42  333346677889999999999999988875 3444433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.83  E-value=4.2e-05  Score=58.21  Aligned_cols=67  Identities=21%  Similarity=0.261  Sum_probs=50.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++.+++.... +...   ....++.+|..++.      +.++|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~~~~---~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-ASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhh-hhhh---hhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            68999997 999999999999999999999986543221 1111   24678889987762      46789888654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=2.6e-05  Score=61.49  Aligned_cols=70  Identities=17%  Similarity=0.133  Sum_probs=46.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceE-EEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-LIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||+|.|+ |.||+.++..|.+.|++|.+++|+.................. .+..+ ..+.+..+|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAN-DPDFLATSDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEES-CHHHHHTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccc-hhhhhcccceEEEee
Confidence            69999997 999999999999999999999997654332221111111111 11222 224557899999865

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=1.9e-05  Score=62.20  Aligned_cols=110  Identities=15%  Similarity=0.114  Sum_probs=72.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc-----cCCCceEEEeccccchhccCCCEEEEc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH-----FRNPRFELIRHDVVEPILLEVDQIYHL  187 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~vD~Vih~  187 (335)
                      +..||.|.|+ |.||..++..|+..|.  ++++++++.+..+....+.     +..........|  .+.+.++|+||-.
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d--~~~~~~adivvit   94 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD--YNVSANSKLVIIT   94 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS--GGGGTTEEEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc--hhhhccccEEEEe
Confidence            4458999996 9999999999999975  8999887654322221111     111122222333  3456899999999


Q ss_pred             cCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          188 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       188 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      ||...  ....+....++.|+.-...++....+.+.  .++.+|
T Consensus        95 ag~~~--~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          95 AGARM--VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             CSCCC--CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ccccc--CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            88433  22344556678899999999988888775  344444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.75  E-value=0.00015  Score=58.09  Aligned_cols=100  Identities=12%  Similarity=0.094  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC-CCc-ccc---cc-ccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT-GRK-DNL---VH-HFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~-~~~-~~~---~~-~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |++|.|.|||||+|..|++.|.++.. ++..+..... ... ...   .. ............+..+....++|++|.+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al   80 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT   80 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence            67999999999999999999998744 6655543221 111 111   11 11112233333344444567899999875


Q ss_pred             CCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          189 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                      ..                  .....+...+.+.+.++|-.|+..-
T Consensus        81 p~------------------~~s~~~~~~~~~~~~~vIDlSadfR  107 (179)
T d2g17a1          81 AH------------------EVSHDLAPQFLQAGCVVFDLSGAFR  107 (179)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred             cc------------------hhHHHHhhhhhhcCceeeccccccc
Confidence            31                  1122345556677778888887643

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.75  E-value=3.3e-05  Score=60.64  Aligned_cols=105  Identities=14%  Similarity=0.071  Sum_probs=67.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC----eEEEEec-CCCCCccccc-------cccCCCceEEEeccccchhccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD----EVIVIDN-FFTGRKDNLV-------HHFRNPRFELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~----~V~~~~r-~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~vD~  183 (335)
                      .+||.|+||+|+||++++-.|+..+.    ..+.+.. ......+...       .......-.....+-..+.+.++|+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adv   83 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccE
Confidence            45999999999999999999987653    1122111 1111111111       0001112233444445678899999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcC
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG  222 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~  222 (335)
                      ||-+||.  +.....+..+.++.|+.-.+.+.....+..
T Consensus        84 ViitaG~--~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          84 ALLVGAA--PRKAGMERRDLLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             EEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEeecCc--CCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999985  333345667788999999999999998853

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.68  E-value=3.3e-05  Score=59.71  Aligned_cols=109  Identities=15%  Similarity=0.136  Sum_probs=67.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccccccc-----CCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHF-----RNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +||.|.|+ |.+|..++..|+..+. ++++++..++.......+..     ......+...+. .+.+.+.|+||-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-~~~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-YADTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc-HHHhcCCCEEEEeeec
Confidence            58999996 9999999999988875 88888876553332222111     111222222222 2357899999999984


Q ss_pred             CCCCCccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEe
Q 019794          191 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTS  229 (335)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iS  229 (335)
                      ..  ....+....++.|..-...++....+.+. -++.+-
T Consensus        80 ~~--~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv  117 (142)
T d1uxja1          80 PR--KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV  117 (142)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             cC--CcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence            32  22344556778999999999999988775 344443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.66  E-value=6.4e-05  Score=58.88  Aligned_cols=104  Identities=15%  Similarity=0.082  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-------eEEEEecCCCCCc-cccc----cccCCCceEEEeccccchhccCCCE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-------EVIVIDNFFTGRK-DNLV----HHFRNPRFELIRHDVVEPILLEVDQ  183 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-------~V~~~~r~~~~~~-~~~~----~~~~~~~~~~~~~D~~~~~~~~vD~  183 (335)
                      .+||.|+||+|.||++++-.|+..+.       +++.++......+ +.+.    .............+-..+.+.++|+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv   82 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV   82 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceE
Confidence            45999999999999999999886532       3444443221111 1110    1111112233444445578899999


Q ss_pred             EEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHc
Q 019794          184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV  221 (335)
Q Consensus       184 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~  221 (335)
                      ||-+||..  .....+....++.|..-.+.+.....+.
T Consensus        83 VVitag~~--~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          83 AILVGSMP--RRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             EEECCSCC--CCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccC--CCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence            99999843  2333455567899999999999888775

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.65  E-value=1.6e-05  Score=64.06  Aligned_cols=36  Identities=28%  Similarity=0.442  Sum_probs=33.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      |||.|+||+|.+|++|++.|++.|++|++.+|+++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            689999999999999999999999999999997653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.55  E-value=0.0003  Score=54.29  Aligned_cols=93  Identities=16%  Similarity=0.232  Sum_probs=52.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-C---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG-D---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPAS  192 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~  192 (335)
                      |||.|.||||++|+.+++.|++.. +   ++..+..+....+  ... +.. ....+........+.++|+||.+...  
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk--~~~-~~~-~~~~~~~~~~~~~~~~~DvvF~alp~--   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--APN-FGK-DAGMLHDAFDIESLKQLDAVITCQGG--   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB--CCC-SSS-CCCBCEETTCHHHHTTCSEEEECSCH--
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc--ccc-cCC-cceeeecccchhhhccccEEEEecCc--
Confidence            689999999999999999888753 2   5555443322111  111 111 11111111122356889999987631  


Q ss_pred             CCCccCChhhHHhhHHHHHHHHHHHHHHcCCe--EEEEecc
Q 019794          193 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTSTS  231 (335)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r--~v~iSS~  231 (335)
                                      .-+..+...+.+.|.+  +|=.|+.
T Consensus        75 ----------------~~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          75 ----------------SYTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             ----------------HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred             ----------------hHHHHHhHHHHHcCCceEEEeCCcc
Confidence                            1133566667777776  4444554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.53  E-value=9.3e-05  Score=57.35  Aligned_cols=110  Identities=16%  Similarity=0.114  Sum_probs=70.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccc-----cCCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHH-----FRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      |||.|+|+ |.+|+.++..|+.+|.  ++++++.++...+....+.     ...........|  .+.+.++|+||-+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d--~~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND--WAALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC--GGGGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC--HHHhccccEEEEecc
Confidence            68999995 9999999999998874  8888887654322211111     111233333333  345799999999998


Q ss_pred             CCCCCC--ccCChhhHHhhHHHHHHHHHHHHHHcCC-eEEEEe
Q 019794          190 PASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTS  229 (335)
Q Consensus       190 ~~~~~~--~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r~v~iS  229 (335)
                      ......  ...+-...++.|..-...+++..++.+. -++.+-
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            432111  1112345678899999999999988875 344433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.45  E-value=8.5e-05  Score=58.94  Aligned_cols=70  Identities=24%  Similarity=0.293  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccc-----cchhccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VEPILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~vD~Vih~A  188 (335)
                      ++|+|+|.|| |++|+.+++.|.+.|++|++++|+...... +...+  ........+.     .+..+...|.++.+.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~-l~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKK-LSAGV--QHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHH-HHTTC--TTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHH-HHhcc--cccccccccccchhhhHhhhhccceeEeec
Confidence            3689999986 999999999999999999999997653332 22222  2222222222     223456778887644

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.41  E-value=0.00038  Score=53.96  Aligned_cols=111  Identities=13%  Similarity=0.143  Sum_probs=72.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCcccccccc-----CCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHF-----RNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      +||.|.|+ |.+|+.++..|...+. ++.+++++++..+....+..     ......+... -..+.+.++|+||-+||.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~-~~~~~~~~advvvitag~   81 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCGGGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEec-ccccccCCCcEEEEeccc
Confidence            48999995 9999999988877765 88888876543332211111     1122222222 234567899999999985


Q ss_pred             CCCCCc---cCChhhHHhhHHHHHHHHHHHHHHcCC-e-EEEEe
Q 019794          191 ASPVHY---KYNPVKTIKTNVMGTLNMLGLAKRVGA-K-FLLTS  229 (335)
Q Consensus       191 ~~~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~-r-~v~iS  229 (335)
                      ......   ..+-...++.|..-...+++..++.+. - ++.+|
T Consensus        82 ~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          82 TKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             SSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            332221   123456789999999999999998875 3 44444

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00058  Score=56.57  Aligned_cols=72  Identities=17%  Similarity=0.205  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcC----------------CchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccc-
Q 019794          113 GRRRLRIVVTGG----------------AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-  175 (335)
Q Consensus       113 ~~~~~~vlVTGa----------------tG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-  175 (335)
                      +++|++||||+|                ||.+|.+|++++.++|++|+++.-.....        ....+..+...-.+ 
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~~~~~t~~~   74 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TPPFVKRVDVMTALE   74 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CCTTEEEEECCSHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------cccccccceehhhHH
Confidence            467888888875                79999999999999999999986533211        11234444432222 


Q ss_pred             ------hhccCCCEEEEccCCCC
Q 019794          176 ------PILLEVDQIYHLACPAS  192 (335)
Q Consensus       176 ------~~~~~vD~Vih~A~~~~  192 (335)
                            ..+.++|++|++|++..
T Consensus        75 m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          75 MEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHhhhccceeEeeeechhh
Confidence                  24568999999998643

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.25  E-value=0.0011  Score=51.41  Aligned_cols=93  Identities=14%  Similarity=0.163  Sum_probs=55.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC---eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD---EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPV  194 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~  194 (335)
                      +|.|.|||||+|.+|++.|.++..   ++..+... +......    ....-.....+..+..+.++|+++.+++.    
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~-~s~G~~~----~~~~~~~~~~~~~~~~~~~~d~~f~~~~~----   73 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSL----KFKDQDITIEETTETAFEGVDIALFSAGS----   73 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG-GGTTCEE----EETTEEEEEEECCTTTTTTCSEEEECSCH----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc-ccccccc----cccCCcccccccchhhhhhhhhhhhccCc----
Confidence            799999999999999998888753   33333321 1111111    11112233344455567789999877631    


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEV  233 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v  233 (335)
                                    ..+......+.+.+.++|=.|+..=
T Consensus        74 --------------~~s~~~~~~~~~~~~~VIDlSsdfR   98 (154)
T d2gz1a1          74 --------------STSAKYAPYAVKAGVVVVDNTSYFR   98 (154)
T ss_dssp             --------------HHHHHHHHHHHHTTCEEEECSSTTT
T ss_pred             --------------cchhhHHhhhccccceehhcChhhh
Confidence                          1123445555667778888887643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.17  E-value=0.00067  Score=51.02  Aligned_cols=73  Identities=18%  Similarity=0.308  Sum_probs=53.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHY  196 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~  196 (335)
                      |||.|.|++|-+|+.|.+.+.++++++++....                      + ..+.+.++|+||...-+      
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~----------------------~-~~~~~~~~DVvIDFS~p------   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDV----------------------N-GVEELDSPDVVIDFSSP------   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEET----------------------T-EEEECSCCSEEEECSCG------
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECC----------------------C-cHHHhccCCEEEEecCH------
Confidence            589999999999999999999999887654211                      0 11234678999986521      


Q ss_pred             cCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          197 KYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                                  .++...++.|.+.++.+|.=+|
T Consensus        52 ------------~~~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          52 ------------EALPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             ------------GGHHHHHHHHHHHTCEEEECCC
T ss_pred             ------------HHHHHHHHHHHhcCCCEEEEcC
Confidence                        2355788899999888766555

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.14  E-value=0.00015  Score=56.97  Aligned_cols=72  Identities=22%  Similarity=0.347  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++++|+|.|+ |-+|..+++.|...|. ++.+..|...... .+...+   .......+-....+.++|+||.+.+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~-~l~~~~---~~~~~~~~~~~~~l~~~Divi~ats   93 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDL---GGEAVRFDELVDHLARSDVVVSATA   93 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHH---TCEECCGGGHHHHHHTCSEEEECCS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHH-HHHHhh---hcccccchhHHHHhccCCEEEEecC
Confidence            357789999997 9999999999999998 6888877533222 222222   3445566666677889999999876

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.11  E-value=0.0013  Score=49.46  Aligned_cols=66  Identities=17%  Similarity=0.185  Sum_probs=48.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch------hccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP------ILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~vD~Vih~A  188 (335)
                      |+++|.|+ |.+|+.+++.|.+.|++|++++.+++....     ........+.+|.+++      .+.++|.||-+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~-----~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-----YASYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHH-----TTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHH-----HHHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            57888876 999999999999999999999876543222     1223446677887765      246789888654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.08  E-value=0.00031  Score=54.48  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=35.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      ++.++++|.|.||.|.+|+.+++.|.+.|++|.+.+++.
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            356778999999999999999999999999999998864

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.08  E-value=0.00013  Score=57.96  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec-cccc--hhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH-DVVE--PILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~--~~~~~vD~Vih~A~  189 (335)
                      ++.+|+|+||+|.+|...+..+...|.+|++++++++..+. +.+ +....  .++. |..+  ....++|+||.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~~~-lGa~~--~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLA-LGAEE--AATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHH-TTCSE--EEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc-ccc-cccce--eeehhhhhhhhhccccccccccccc
Confidence            45699999999999999998888889999999886543322 221 22211  2222 2111  13467999999765

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00035  Score=55.38  Aligned_cols=74  Identities=16%  Similarity=0.123  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..++|+|+|.|+ |+.+++++..|.+.|.+|+++.|+.+...+..........+..+.  ..+....++|+||++..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~--~~~~~~~~~dliIN~Tp   88 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS--MDELEGHEFDLIINATS   88 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC--SGGGTTCCCSEEEECCS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccc--cccccccccceeecccc
Confidence            456789999996 888999999999999999999887543322111111122333333  22334467999999764

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.00035  Score=55.70  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEec
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN  148 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r  148 (335)
                      |++|.|.||||++|..+++.|.+... ++..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            57999999999999999999988654 6666543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.00029  Score=47.99  Aligned_cols=37  Identities=35%  Similarity=0.383  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|+|+||+|.+|...+..+...|++|+++.++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            4568999999999999999988888999999988654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.91  E-value=0.00016  Score=57.95  Aligned_cols=73  Identities=16%  Similarity=0.052  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eEEEeccccch-----hccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FELIRHDVVEP-----ILLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~-----~~~~vD~Vih~A  188 (335)
                      ++.+|||+||+|.+|...+.-....|++|+++++++++. +.+.. ..... ++..+.+..+.     .-.++|+||.+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~~~~-~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQ-IGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-TTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HHHHh-hhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence            467999999999999999988888899999999864322 11222 12121 11122222222     124699999987


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      |
T Consensus       107 G  107 (182)
T d1v3va2         107 G  107 (182)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.0012  Score=51.67  Aligned_cols=99  Identities=13%  Similarity=0.221  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC-CeEEEE-ecCCCCCc-cccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG-DEVIVI-DNFFTGRK-DNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      +.++|.|.|++|.+|+.|++.+.+.. .+++.. ++...... .................+..+..+..+|+||...   
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs---   79 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT---   79 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEec---
Confidence            34589999999999999999998874 465443 33222111 1111111111222222333455677899999864   


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecc
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS  231 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~  231 (335)
                                     .-.++...++.|.+.++.+|.=+|.
T Consensus        80 ---------------~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          80 ---------------RPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ---------------CHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             ---------------cHHHHHHHHHHHHhccceeEEecCC
Confidence                           2345567888999998877765553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.87  E-value=0.00077  Score=53.38  Aligned_cols=75  Identities=12%  Similarity=0.170  Sum_probs=49.9

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..++++|+|.|+ |+.+++++..|.+.+.+|+++.|+.+..+...........+.....|  +..+.++|+||++...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc--cccccccceeeecccc
Confidence            456789999995 88899999999987789999999754332221111111233333333  3346789999998643

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00021  Score=56.87  Aligned_cols=71  Identities=15%  Similarity=0.179  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEe---ccccchh-----ccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIR---HDVVEPI-----LLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~D~~~~~-----~~~vD~Vih  186 (335)
                      ++.+|||+||+|.+|...+..+...|.+|+++++++++. +.+.+ +...  ++++   .|..+..     -.++|+||.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~-~Ga~--~vi~~~~~~~~~~i~~~t~~~g~d~v~d  103 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQ-NGAH--EVFNHREVNYIDKIKKYVGEKGIDIIIE  103 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-TTCS--EEEETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-ccccc-cCcc--cccccccccHHHHhhhhhccCCceEEee
Confidence            456999999999999999998888899999998764322 22222 2211  2332   2332221     235899999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +.|
T Consensus       104 ~~g  106 (174)
T d1yb5a2         104 MLA  106 (174)
T ss_dssp             SCH
T ss_pred             ccc
Confidence            874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.80  E-value=0.0026  Score=49.80  Aligned_cols=68  Identities=12%  Similarity=0.096  Sum_probs=45.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ||+|+|.| .|.||..+++.|.+.|+  +|++++++.+.......    ...++....+..+....++|+||.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~----~~~~~~~~~~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIIDEGTTSIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCSEEESCGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH----hhcchhhhhhhhhhhccccccccccC
Confidence            57899998 59999999999999986  78888775433222111    12233344444444556789998764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.74  E-value=0.0011  Score=53.09  Aligned_cols=33  Identities=27%  Similarity=0.585  Sum_probs=26.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEe
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVID  147 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~  147 (335)
                      +..||.|.||||++|..|++.|.+..+ ++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            345899999999999999999988754 665554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.70  E-value=0.0012  Score=51.64  Aligned_cols=65  Identities=20%  Similarity=0.332  Sum_probs=43.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||.|.| .|.+|+.+++.|.+.|++|++.+|+.+..+.....    ..++....+.  +.+.++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~----~~~~~~~~~~--~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVDEAGQDL--SLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCSEEESCG--GGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh----hccceeeeec--ccccccccccccC
Confidence            6899997 59999999999999999999998875432221111    1111111121  3568899998643

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.62  E-value=0.00099  Score=53.00  Aligned_cols=38  Identities=34%  Similarity=0.326  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      ++.+|||+||+|.+|...+.-....|.+|+++.+++++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k   68 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE   68 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH
Confidence            45689999999999999998888889999999886553

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.60  E-value=0.0016  Score=52.91  Aligned_cols=34  Identities=41%  Similarity=0.562  Sum_probs=30.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |+|.|.| .||+|..++..|++.|++|+++|.+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~   34 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSST   34 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHH
Confidence            6899997 699999999999999999999987643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.60  E-value=0.0039  Score=46.10  Aligned_cols=36  Identities=22%  Similarity=0.392  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      .++++|.|| |++|-+++..|.++|.+|.++.+...-
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            468999985 999999999999999999999997653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.00031  Score=56.06  Aligned_cols=73  Identities=15%  Similarity=0.072  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eEEEeccccchh-----ccCCCEEEEcc
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FELIRHDVVEPI-----LLEVDQIYHLA  188 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~-----~~~vD~Vih~A  188 (335)
                      ++.+|||+||+|.+|...+..+...|.+|++++++.++ .+.+.+. .... ++..+.|+.+..     -.++|+||.+.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~-~~~l~~~-Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLSRL-GVEYVGDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHTT-CCSEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccc-ccccccc-cccccccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            35699999999999999998888889999999876432 2222222 2111 111122222221     14699999988


Q ss_pred             C
Q 019794          189 C  189 (335)
Q Consensus       189 ~  189 (335)
                      |
T Consensus       103 g  103 (183)
T d1pqwa_         103 A  103 (183)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.49  E-value=0.0012  Score=52.08  Aligned_cols=71  Identities=21%  Similarity=0.214  Sum_probs=45.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh-----ccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI-----LLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~vD~Vih~A~  189 (335)
                      +.+|||+||+|.+|...+.-....|++|+++++++++... +.. +....+ +...|...+.     -.++|+||.+.|
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-~~~-lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY-LKQ-LGASEV-ISREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH-HHH-HTCSEE-EEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH-HHh-hcccce-EeccchhchhhhcccCCCceEEEecCc
Confidence            4479999999999999997777779999999987553322 221 122221 1111221111     245999999875

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.40  E-value=0.0011  Score=51.82  Aligned_cols=65  Identities=14%  Similarity=0.172  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |++|.|.| .|.+|+.+++.|+++|++|.+.+|+..........       .....+...+.+..+|+|+-+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-------GASAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-------TCEECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh-------hccccchhhhhccccCeeeecc
Confidence            57899997 79999999999999999999998864432211111       1223344556778899998765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.00042  Score=55.09  Aligned_cols=72  Identities=15%  Similarity=0.069  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCC-ceEEEeccccchh-----ccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNP-RFELIRHDVVEPI-----LLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~-----~~~vD~Vih~A~  189 (335)
                      +.+|+|+||+|.+|...+.-+...|.+|+++++++.+.+. +.+ +... .++.-+.|..+..     -.++|+|+.+.+
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~~-lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALK-AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHH-HTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH-HHh-cCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            5699999999999999998888889999999987554322 222 2211 1222223333321     135899999875

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.26  E-value=0.0085  Score=45.83  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=35.7

Q ss_pred             CCCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          108 VPVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       108 ~p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      .|.....++|+|||.|| |.+|..-++.|++.|.+|+++.-.
T Consensus         5 lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           5 LQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             chhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45566788999999997 999999999999999999998643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.25  E-value=0.0023  Score=49.28  Aligned_cols=64  Identities=19%  Similarity=0.155  Sum_probs=44.4

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||.|.| .|.+|+.+++.|+++|++|++.++.............   .+    .+..++...++|+||-+-
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~----~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV---GV----TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH---TC----EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcc---cc----cccHHHHHhhcCeEEEEe
Confidence            5888997 6999999999999999999888765443322221111   11    123456678899999765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.21  E-value=0.0066  Score=48.08  Aligned_cols=71  Identities=20%  Similarity=0.290  Sum_probs=47.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCc-ccccc-------ccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRK-DNLVH-------HFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~~~-------~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.|.|+ |..|.+++..|.+.|++|.+..|..+... +....       ........+...+..++++.++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999995 99999999999999999999988533210 00000       00111233444555667889999998743

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.00061  Score=54.76  Aligned_cols=74  Identities=19%  Similarity=-0.001  Sum_probs=42.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCc-eEEEeccccch----hccCCCEEEEccC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPR-FELIRHDVVEP----ILLEVDQIYHLAC  189 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~----~~~~vD~Vih~A~  189 (335)
                      +.+|||+||+|.||...+.-....|.++++...........+...+.... ++.-..|..+.    .-.++|+||.+.|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            35899999999999999977777898655543332222222222222221 22222222221    1246999999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.0017  Score=50.90  Aligned_cols=70  Identities=17%  Similarity=0.168  Sum_probs=45.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec---cccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~~~~~vD~Vih~A~  189 (335)
                      .+.+|+|.|+ |.||...+..+...|+++++++++.... +... .+...  .+++.   +.......++|++|.+.|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~-~lGad--~~i~~~~~~~~~~~~~~~D~vid~~g  102 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAK-ALGAD--EVVNSRNADEMAAHLKSFDFILNTVA  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHH-HHTCS--EEEETTCHHHHHTTTTCEEEEEECCS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHh-ccCCc--EEEECchhhHHHHhcCCCceeeeeee
Confidence            3569999986 8899999988888899999888765432 2222 22222  12222   222234567999999886

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.10  E-value=0.0013  Score=51.38  Aligned_cols=64  Identities=17%  Similarity=0.269  Sum_probs=45.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|-|.| .|.+|+.+++.|++.|++|++.+|+++.......     ...  ...+...+...++|+||-+-
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-----~~~--~~~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----AGA--ETASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----TTC--EECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-----hhh--hhcccHHHHHhCCCeEEEEc
Confidence            5799998 6999999999999999999999886543222111     111  22344455677899999865

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.013  Score=48.59  Aligned_cols=104  Identities=12%  Similarity=0.084  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccc----------------------cccCCCceEEEe
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLV----------------------HHFRNPRFELIR  170 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~----------------------~~~~~~~~~~~~  170 (335)
                      .+.++|+|.| .|++|++++..|++.|. +++++|.+.-...+...                      ...+...++.+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            4556999999 58899999999999998 78888765322111100                      111112333333


Q ss_pred             ccccc----hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019794          171 HDVVE----PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYG  235 (335)
Q Consensus       171 ~D~~~----~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~  235 (335)
                      ..+..    ..+.+.|+||.+.                 .|......+-++|.+.+..+|+.+....+|
T Consensus       107 ~~~~~~~~~~~~~~~divid~~-----------------d~~~~~~~in~~~~~~~ip~i~g~~~~~~g  158 (247)
T d1jw9b_         107 ALLDDAELAALIAEHDLVLDCT-----------------DNVAVRNQLNAGCFAAKVPLVSGAAIRMEG  158 (247)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECC-----------------SSHHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred             hhhhhccccccccccceeeecc-----------------chhhhhhhHHHHHHHhCCCccccccccccc
Confidence            32222    2345688988765                 233344466677888888888766544443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.09  E-value=0.0026  Score=50.27  Aligned_cols=35  Identities=23%  Similarity=0.153  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .|+|.|.|+ |.+|..++..|.++|++|.+++|++.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~   35 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQ   35 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            379999996 99999999999999999999999754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.09  E-value=0.0022  Score=51.31  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      -++|.|.|| |.+|+.|+..++..|++|++++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            468999997 999999999999999999999997653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.89  E-value=0.0028  Score=49.70  Aligned_cols=71  Identities=23%  Similarity=0.137  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEec----cccchhccCCCEEEEccCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH----DVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.+|+|.|+ |.+|...+..+...|.+|+++++++.+.+. ..+ +...  +++..    +..+....+.|.+|.+.+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~-a~~-lGa~--~~i~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-AMK-MGAD--HYIATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHH-HTCS--EEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH-hhc-cCCc--EEeeccchHHHHHhhhcccceEEEEecC
Confidence            4569999986 999999887777789999999987653322 222 2211  12221    2222345568999998763

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.84  E-value=0.0031  Score=50.07  Aligned_cols=37  Identities=35%  Similarity=0.360  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      +.+|||+||+|.+|...+.-....|++|+++++++++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            3489999999999999998888889999999986554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.81  E-value=0.016  Score=44.26  Aligned_cols=69  Identities=20%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      .|+|.|. |-+|..++++|.+.|.+|++++.+++........ .....+.++.+|.+++.      +.++|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~-~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQ-RLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHH-hhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            5889886 8999999999999999999998765432222221 22357889999988762      45689998765

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.81  E-value=0.01  Score=47.00  Aligned_cols=77  Identities=12%  Similarity=0.052  Sum_probs=48.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccc--ccccc-CCCceEEEecccc-----chhccCCCE
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDN--LVHHF-RNPRFELIRHDVV-----EPILLEVDQ  183 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~D~~-----~~~~~~vD~  183 (335)
                      ..++++|+|.|+ |+.|++++..|.+.|. +++++.|+.+.....  +.+.+ ..........+..     ...+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            457789999996 8899999999999998 788888875533221  11111 0111122223322     234578999


Q ss_pred             EEEccCC
Q 019794          184 IYHLACP  190 (335)
Q Consensus       184 Vih~A~~  190 (335)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9998643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.73  E-value=0.011  Score=43.17  Aligned_cols=35  Identities=26%  Similarity=0.472  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .++++|.|| |++|-.++..|.+.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            368999995 99999999999999999999988654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.71  E-value=0.01  Score=43.86  Aligned_cols=36  Identities=28%  Similarity=0.482  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|+|.|| |++|.+++..|.+.|.+|.++.+...
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4568999985 99999999999999999999988654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.69  E-value=0.13  Score=37.92  Aligned_cols=88  Identities=15%  Similarity=0.098  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCC---chhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          114 RRRLRIVVTGGA---GFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       114 ~~~~~vlVTGat---G~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++.++|.|.||+   +..|..+.+.|.+.| .+|+.+....    ++....      . .-.++ ++.-..+|.++-+. 
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~----~~i~G~------~-~y~sl-~dlp~~vDlvvi~v-   72 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE----EEVQGV------K-AYKSV-KDIPDEIDLAIIVV-   72 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC----SEETTE------E-CBSST-TSCSSCCSEEEECS-
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc----cccCCe------E-eecch-hhcCCCCceEEEec-
Confidence            566799999998   899999999987766 5888874321    111100      0 00011 11224589888653 


Q ss_pred             CCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCe-EEEEecc
Q 019794          190 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS  231 (335)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-~v~iSS~  231 (335)
                                       .-..+..+++.|.+.|++ ++.+|+.
T Consensus        73 -----------------p~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          73 -----------------PKRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             -----------------CHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             -----------------ChHHhHHHHHHHHHcCCCEEEEeccc
Confidence                             123445788889899985 5555553

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.015  Score=53.96  Aligned_cols=104  Identities=10%  Similarity=0.109  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCc----------cc------------cccccCCCceEEEec
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRK----------DN------------LVHHFRNPRFELIRH  171 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~----------~~------------~~~~~~~~~~~~~~~  171 (335)
                      +..+|+|.|+ |.+|.++++.|+..|. +++++|.+.-...          +.            +.+.-+...++.+..
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            3458999996 7899999999999997 7888766432110          00            111112234555655


Q ss_pred             cccc------hhccCCCEEEEccCCCCCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019794          172 DVVE------PILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD  236 (335)
Q Consensus       172 D~~~------~~~~~vD~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS~~v~~~  236 (335)
                      +..+      ..+.+.|+||.+.                 .|......+-+.|.+.+..+|..++...||.
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~-----------------~~~~~~~~l~~~c~~~~ip~i~~~~~G~~G~  156 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQ-----------------LPESTSLRLADVLWNSQIPLLICRTYGLVGY  156 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEES-----------------CCHHHHHHHHHHHHHHTCCEEEEEEETTEEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence            5432      3466799999754                 2344445677888888889999888776653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.58  E-value=0.0023  Score=51.42  Aligned_cols=72  Identities=18%  Similarity=0.064  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccc--------ccccC-CCceEEEeccccchhccCCCEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--------VHHFR-NPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~--------~~~~~-~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      ..|+||.|.|| |..|.+++..|.+.|++|.+.+|+++....-.        ..... ..++.  ..+..++++.++|+|
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~--~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNIT--FTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEE--EESCHHHHHTTCSCE
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccc--cchhhhhccCCCCEE
Confidence            45668999995 99999999999999999999998654221000        00001 11222  223345668889999


Q ss_pred             EEcc
Q 019794          185 YHLA  188 (335)
Q Consensus       185 ih~A  188 (335)
                      |.+.
T Consensus        82 iiav   85 (189)
T d1n1ea2          82 LFVI   85 (189)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            8743

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.031  Score=40.32  Aligned_cols=65  Identities=17%  Similarity=0.262  Sum_probs=44.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccch-----hc--cCCCEEEE
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP-----IL--LEVDQIYH  186 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~--~~vD~Vih  186 (335)
                      ..+.||.|.| +|.+|+-++....+.|+++++++.++.........       +.+.+|..|.     ..  .++|+|-.
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~-------~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAH-------RSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSS-------EEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCC-------eEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            3456899999 59999999999999999999998865533322211       3455555443     11  35788854

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.54  E-value=0.0071  Score=47.54  Aligned_cols=113  Identities=12%  Similarity=0.103  Sum_probs=67.0

Q ss_pred             CCeEEEEcCCchhHHH--HHHHHHhC----CCeEEEEecCCCCCcccc---ccc--cCCCceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSH--LVDKLIDR----GDEVIVIDNFFTGRKDNL---VHH--FRNPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~--l~~~Ll~~----g~~V~~~~r~~~~~~~~~---~~~--~~~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      .|||.|.|| |.+|..  ++..|+..    +.+++.+|.+++..+...   .+.  .....+.+...+..++++.++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            469999996 888864  34445543    359999998755332111   110  123355666666677789999999


Q ss_pred             EEccCCCCCCCccCChh------------------------hHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          185 YHLACPASPVHYKYNPV------------------------KTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       185 ih~A~~~~~~~~~~~~~------------------------~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      |..++.........+..                        .....|+.-.+.+++..++...  .++++|
T Consensus        81 v~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          81 INTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             EECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             eeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            99886432111000000                        0012477888888888888765  455554

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.50  E-value=0.01  Score=43.41  Aligned_cols=35  Identities=14%  Similarity=0.298  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .++|+|.|| |++|-+++..|.+.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            368999995 99999999999999999999998654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.49  E-value=0.0094  Score=46.89  Aligned_cols=71  Identities=17%  Similarity=0.194  Sum_probs=45.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceE-EEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-LIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .+|-|.| .|.+|..+++.|++.|++|++.+|++++..+............ ....+.....+..+|.+|-+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEec
Confidence            4788998 6999999999999999999999997654333222211111111 112222334567788888765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.49  E-value=0.061  Score=40.15  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=49.9

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCCCCc
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASPVHY  196 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~~~~  196 (335)
                      ||.|.|++|-+|+.+++.+.+.. .++.......    +                ++......++|+||...-+      
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~----~----------------~~~~~~~~~~DvvIDFS~p------   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG----D----------------PLSLLTDGNTEVVIDFTHP------   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT----C----------------CTHHHHTTTCSEEEECCCT------
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC----C----------------chhhhccccCCEEEEcccH------
Confidence            68999999999999999887764 5665543210    0                0111123568999987632      


Q ss_pred             cCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          197 KYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       197 ~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                                  .++...++.|.+.++.+|.=+|
T Consensus        55 ------------~~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          55 ------------DVVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             ------------TTHHHHHHHHHHTTCEEEECCC
T ss_pred             ------------HHHHHHHHHHHhcCCCEEEecc
Confidence                        1244678889999988766444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.42  E-value=0.0047  Score=48.84  Aligned_cols=75  Identities=15%  Similarity=0.104  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccc---cccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV---HHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .++|+|+|.|+ |+.+++++..|.+.| +|+++.|+.+...+...   ..........+..+..+..+...|+||++...
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~   93 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI   93 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence            57789999995 789999999997766 89999886543222111   11111111222333334455778999997543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.41  E-value=0.016  Score=42.33  Aligned_cols=36  Identities=25%  Similarity=0.312  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ..++++|.|| |+||-.++..|.+.|.+|.++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3468999995 99999999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.38  E-value=0.015  Score=42.80  Aligned_cols=34  Identities=24%  Similarity=0.408  Sum_probs=30.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|.|| |+||-+++..|.+.|.+|.++.+.+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            58999995 99999999999999999999988654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.018  Score=44.77  Aligned_cols=71  Identities=14%  Similarity=0.096  Sum_probs=44.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccch--------hccCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEP--------ILLEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~vD~Vih  186 (335)
                      +.+|+|.|+ |.+|...+..+...|+ +|+++++++.+...  .+.+....+.....+...+        .-.++|+||.
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~--a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid  103 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK--AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE  103 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH--HHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH--HHHhCCcccccccccccccccccccccCCCCceEEEe
Confidence            458999986 9999999988888898 79998876443221  1222222222222111111        1246899999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +.|
T Consensus       104 ~~G  106 (171)
T d1pl8a2         104 CTG  106 (171)
T ss_dssp             CSC
T ss_pred             ccC
Confidence            886

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.16  E-value=0.015  Score=42.30  Aligned_cols=34  Identities=24%  Similarity=0.443  Sum_probs=30.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++|+|.|| |++|-+++..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            58999995 99999999999999999999988654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.15  E-value=0.024  Score=44.84  Aligned_cols=62  Identities=16%  Similarity=0.052  Sum_probs=47.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+++|.|.| .|.||+.+++.+...|.+|++.++.......             ...+-.++.+..+|+|+.+.
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~-------------~~~~~l~ell~~sDiv~~~~  100 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW-------------RFTNSLEEALREARAAVCAL  100 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS-------------CCBSCSHHHHTTCSEEEECC
T ss_pred             cccCceEEEec-cccccccceeeeeccccccccccccccccce-------------eeeechhhhhhccchhhccc
Confidence            36789999999 5889999999999999999999876432110             01234567889999998755

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.11  E-value=0.12  Score=35.91  Aligned_cols=71  Identities=17%  Similarity=0.100  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCchhH-HHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          114 RRRLRIVVTGGAGFVG-SHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG-~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      .+.++|.+.|- |++| +.|++.|.++|++|...|+......+.+.    ...+.+..++..+ .+.++|.||...|.
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~----~~Gi~v~~g~~~~-~i~~~d~vV~S~AI   77 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA----QAGAKIYIGHAEE-HIEGASVVVVSSAI   77 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH----HTTCEEEESCCGG-GGTTCSEEEECTTS
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH----HCCCeEEECCccc-cCCCCCEEEECCCc
Confidence            45679999996 4455 78899999999999999986433322222    2345555544433 35789999987764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.09  E-value=0.018  Score=42.35  Aligned_cols=32  Identities=22%  Similarity=0.237  Sum_probs=29.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      ++++|.|| |+||-+++..|.+.|.+|.++.++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            58999995 999999999999999999999875

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.052  Score=48.80  Aligned_cols=35  Identities=29%  Similarity=0.380  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      +.+||||.|+ |+||.++++.|+..|. ++.++|.+.
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            4568999997 6799999999999998 888888753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.05  E-value=0.018  Score=41.73  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=30.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|.|| |++|-+++..|.+.|.+|.++.+.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            58999985 99999999999999999999988654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.021  Score=42.05  Aligned_cols=34  Identities=18%  Similarity=0.298  Sum_probs=31.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|.|| |+||-+++..|.+.|.+|.++.|...
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            68999995 99999999999999999999999754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.03  E-value=0.004  Score=49.37  Aligned_cols=36  Identities=28%  Similarity=0.247  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+.+|+|+|+ |.||...+..+...|+ +|+++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~   64 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN   64 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccc
Confidence            4669999996 8999999988888898 7999988654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.00  E-value=0.0074  Score=46.31  Aligned_cols=64  Identities=17%  Similarity=0.261  Sum_probs=42.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |+|.+.|+ |-+|+++++.|++.| ++|++.+|+++..+ .+...+   .+.... |  .+.+.++|+||-+-
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~-~l~~~~---~~~~~~-~--~~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRE-RLEKEL---GVETSA-T--LPELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHH-HHHHHT---CCEEES-S--CCCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHH-Hhhhhc---cccccc-c--cccccccceEEEec
Confidence            58889985 999999999999888 79999988754332 222211   222221 1  22356789999653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.013  Score=45.45  Aligned_cols=69  Identities=17%  Similarity=0.118  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ..+.||+++|.| .|.||+.+++.|...|.+|++.+.++-..-+....     .+.+.   ..++++...|+||-+.|
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~d-----G~~v~---~~~~a~~~adivvtaTG   88 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAME-----GYEVT---TMDEACQEGNIFVTTTG   88 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-----TCEEC---CHHHHTTTCSEEEECSS
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcC-----ceEee---ehhhhhhhccEEEecCC
Confidence            356889999998 89999999999999999999998865332222211     12222   34556777888887765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.93  E-value=0.017  Score=42.45  Aligned_cols=34  Identities=29%  Similarity=0.489  Sum_probs=30.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ++++|.|| |++|-+++..|.+.|.+|.++.+.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            58999985 99999999999999999999988654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.89  E-value=0.033  Score=39.73  Aligned_cols=39  Identities=18%  Similarity=0.053  Sum_probs=32.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ..+++|+|+|.|+ |.-|..++.+|++.+.+|+.+.|...
T Consensus        28 ~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3578999999994 89999999999988888777766544

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.84  E-value=0.028  Score=43.50  Aligned_cols=36  Identities=22%  Similarity=0.137  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      +.+|+|+| +|.||...+..+...|.+|+++++++.+
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r   62 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRR   62 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHH
Confidence            45899997 6899999998888889999999886543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.84  E-value=0.021  Score=42.59  Aligned_cols=35  Identities=29%  Similarity=0.508  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .++|+|.|| |++|-+++..|.+.|.+|.++.+...
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            468999995 99999999999999999999988654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.016  Score=46.31  Aligned_cols=36  Identities=22%  Similarity=0.416  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      -++|.|.|| |.+|+.|+..++..|++|++++++++.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            469999997 999999999999999999999998653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.75  E-value=0.0051  Score=47.34  Aligned_cols=65  Identities=15%  Similarity=0.254  Sum_probs=44.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||.+.| +|-+|+++++.|++.|++|++.+|+.+...+ +.+.+.   +.  .....++.+.++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~-l~~~~g---~~--~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKE-IAEQLA---LP--YAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHH-HHHHHT---CC--BCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHh-hccccc---ee--eechhhhhhhccceeeeec
Confidence            5788887 6999999999999999999999886543322 211211   11  1122345567899998654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.67  E-value=0.006  Score=47.65  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      +.+|+|+|++|.+|...+..+...|. .|+++++++.
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~   64 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE   64 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchh
Confidence            45899999999999999988888885 8888877643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.61  E-value=0.11  Score=35.63  Aligned_cols=69  Identities=16%  Similarity=0.112  Sum_probs=45.2

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~  190 (335)
                      |||.+.|-+|-==+.|++.|.++|++|...|+......+.+    ....+.+..+. ..+.+.++|.||...+.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L----~~~Gi~i~~gh-~~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYL----RKLGIPIFVPH-SADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH----HHTTCCEESSC-CTTSCCCCSEEEECTTC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHH----HHCCCeEEeee-cccccCCCCEEEEecCc
Confidence            68999986553334789999999999999998644333322    22334444332 22335679999998765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=94.56  E-value=0.016  Score=45.14  Aligned_cols=66  Identities=12%  Similarity=0.231  Sum_probs=43.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++++|+|.|+ |+.+++++..|.+.|. +|.++.|+.+.. +.+...+.   ...+.    .....++|+|||+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka-~~L~~~~~---~~~~~----~~~~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG-QYLAALYG---YAYIN----SLENQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH-HHHHHHHT---CEEES----CCTTCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH-HHHHHhhh---hhhhh----cccccchhhheeccc
Confidence            4568999996 8999999999999997 888888865422 22222221   11111    112356899998754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.53  E-value=0.021  Score=44.29  Aligned_cols=72  Identities=24%  Similarity=0.320  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEe--ccccchhccCCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIR--HDVVEPILLEVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~D~~~~~~~~vD~Vih~A~~  190 (335)
                      ..+|+|.|| |-.|..-++...+.|.+|.++|.+....++ +...+. ..++...  .+...+.+.++|+||.++-.
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~-l~~~~~-~~~~~~~~~~~~l~~~~~~aDivI~aali  105 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLV  105 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHH-HHHhhc-ccceeehhhhhhHHHhhccCcEEEEeeec
Confidence            458999995 999999999999999999999987553322 111111 1233322  23355678899999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.41  E-value=0.03  Score=41.30  Aligned_cols=35  Identities=17%  Similarity=0.340  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .++++|.|| |+||-+++..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            358999995 99999999999999999999988654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.33  E-value=0.023  Score=41.72  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      .++++|.|| |+||-+++..|.+.|.+|.++.|.+.-
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            358999995 999999999999999999999987653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.29  E-value=0.034  Score=40.40  Aligned_cols=35  Identities=14%  Similarity=0.110  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      +++|+|.|| |+||-.++..|.+.|.+|.++.+.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            568999985 99999999999999999999998754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.27  E-value=0.0067  Score=47.69  Aligned_cols=70  Identities=19%  Similarity=0.140  Sum_probs=41.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEE-EEecCCCCCccccccccCCCceEEEecc---ccchh--c--cCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVI-VIDNFFTGRKDNLVHHFRNPRFELIRHD---VVEPI--L--LEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~--~--~~vD~Vih  186 (335)
                      .+.+|+|.|+ |.||...+..+...|++++ ++++++. +.+... .+..  .+++..+   ..+..  +  .++|+||.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~-k~~~a~-~~Ga--~~~i~~~~~~~~~~i~~~t~gg~D~vid  102 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES-RLELAK-QLGA--THVINSKTQDPVAAIKEITDGGVNFALE  102 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH-HHHHHH-HHTC--SEEEETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH-HHHHHH-HcCC--eEEEeCCCcCHHHHHHHHcCCCCcEEEE
Confidence            3568999997 9999999988878888654 4454332 212122 2221  2233332   22221  1  35999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +.|
T Consensus       103 ~~G  105 (174)
T d1f8fa2         103 STG  105 (174)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            886

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.12  E-value=0.024  Score=45.25  Aligned_cols=69  Identities=17%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      .....+++|.|.| .|-||+.+++.|...|.+|+..++.........        ..+...+..++.+..+|+|+.+.
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------LGLQRVSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------HTCEECSSHHHHHHHCSEEEECC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh--------hccccccchhhccccCCEEEEee
Confidence            3456889999998 699999999999999999999987543221110        11223344556677788886554

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.10  E-value=0.028  Score=43.25  Aligned_cols=35  Identities=26%  Similarity=0.306  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~  150 (335)
                      +||||+|.|| |++|-.++..|.+.++  +|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999996 9999999999999885  788887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.10  E-value=0.034  Score=44.65  Aligned_cols=69  Identities=17%  Similarity=0.203  Sum_probs=45.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ++++++|.|-| -|.+|+++++.|.+.|.+|++.+.+........     ....+.+.  ..+-...+||+++=||-
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-----~~g~~~~~--~~~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-----ALGHTAVA--LEDVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----HTTCEECC--GGGGGGCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-----hhcccccC--ccccccccceeeecccc
Confidence            47889999998 799999999999999999998876432211110     01122221  12223357888887763

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.10  E-value=0.057  Score=42.41  Aligned_cols=42  Identities=21%  Similarity=0.333  Sum_probs=35.5

Q ss_pred             CCCCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          109 PVGIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       109 p~~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |.....+.|+|+|.|| |..|.+-+..|.++|++|+++.+...
T Consensus        36 ~~~~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          36 PILPAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CCCSCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             ccCCCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3344566789999995 99999999999999999999988643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.98  E-value=0.26  Score=37.88  Aligned_cols=63  Identities=13%  Similarity=0.170  Sum_probs=40.1

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhC-CCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDR-GDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      .||.|.| +|.+|+..++.|.+. +.+++++........         ........+..+....++|+|+.+..
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------~~~~~~~~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------TKTPVFDVADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------SSSCEEEGGGGGGTTTTCSEEEECSC
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc---------cccccccchhhhhhccccceEEEeCC
Confidence            4789998 699999999999876 347766554322111         11123333444455678999997653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.94  E-value=0.039  Score=44.16  Aligned_cols=66  Identities=20%  Similarity=0.204  Sum_probs=47.1

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ....+++|.|.| .|.||+.+++.|...|.+|++.++.......  .     .   .+..+-.++.+..+|+|+.+.
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~--~-----~---~~~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE--K-----K---GYYVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--H-----T---TCBCSCHHHHHHHCSEEEECS
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc--c-----c---eeeeccccccccccccccccC
Confidence            346789999999 6999999999999999999998764321111  0     0   112344566778899887654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=93.85  E-value=0.024  Score=44.35  Aligned_cols=36  Identities=19%  Similarity=0.102  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+.+|+|.|+ |.+|...+..+...|+ +|++++++++
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~   63 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKD   63 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGG
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHH
Confidence            4569999986 9999999999988897 7888877644

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.85  E-value=0.044  Score=44.63  Aligned_cols=34  Identities=26%  Similarity=0.392  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      .++|+|.|| |..|...+..|.++|++|.+++|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            358999995 9999999999999999999999853

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.80  E-value=0.032  Score=44.32  Aligned_cols=33  Identities=33%  Similarity=0.547  Sum_probs=27.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      |+|.|.| .||+|..++..| ++|++|+++|.++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence            6899997 799999998655 67999999987654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.80  E-value=0.05  Score=43.07  Aligned_cols=68  Identities=13%  Similarity=0.089  Sum_probs=47.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...++++.|.| .|.||+.+++.|...|.+|...++..........       ..+...+..++.+..+|+|+.+.
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------~~~~~~~~l~~~l~~sD~v~~~~  108 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-------LNLTWHATREDMYPVCDVVTLNC  108 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-------HTCEECSSHHHHGGGCSEEEECS
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc-------ccccccCCHHHHHHhccchhhcc
Confidence            46788999998 6999999999999999999999875332211110       11233344556778888886544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=93.77  E-value=0.022  Score=45.21  Aligned_cols=38  Identities=13%  Similarity=-0.074  Sum_probs=30.4

Q ss_pred             CCeEEE-EcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          116 RLRIVV-TGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       116 ~~~vlV-TGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      +.+++| +||+|.+|...+.-....|.+|+++++.....
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~   67 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL   67 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence            445666 69999999999988777899999998865543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.76  E-value=0.051  Score=43.49  Aligned_cols=64  Identities=20%  Similarity=0.296  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...+++|.|.| .|-||+.+++.|...|.+|++.++.......        ..++.   .-.++.+..+|+|+.+.
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~~~~---~~l~~l~~~~D~v~~~~  105 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------PDFDY---VSLEDLFKQSDVIDLHV  105 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------TTCEE---CCHHHHHHHCSEEEECC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCccchhhh--------cchhH---HHHHHHHHhcccceeee
Confidence            46778999999 6999999999999999999999875332111        12222   23456678899987654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.73  E-value=0.099  Score=41.23  Aligned_cols=65  Identities=15%  Similarity=0.030  Sum_probs=47.2

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ...+++|.|.| .|.||+.+++.|...|.+|+..++.......           .....+-.++.+..+|+|+.++.
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----------~~~~~~~l~ell~~sDii~i~~p  105 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-----------NATQVQHLSDLLNMSDVVSLHVP  105 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----------TCEECSCHHHHHHHCSEEEECCC
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-----------hhhhhhhHHHHHhhccceeeccc
Confidence            46788999997 7999999999999999999999875322111           11222345567788999976653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.73  E-value=0.53  Score=33.68  Aligned_cols=82  Identities=21%  Similarity=0.259  Sum_probs=51.8

Q ss_pred             CeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCCCC
Q 019794          117 LRIVVTGGA---GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPASP  193 (335)
Q Consensus       117 ~~vlVTGat---G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~~~  193 (335)
                      |+|.|.|++   +..|..+++.|++.|++|+.+...    .+...      .+..+ .+ .++.-..+|+++-+.     
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~----~~~i~------G~~~y-~s-l~~lp~~~D~vvi~v-----   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN----YDEIE------GLKCY-RS-VRELPKDVDVIVFVV-----   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT----CSEET------TEECB-SS-GGGSCTTCCEEEECS-----
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc----ccccc------Ccccc-cc-chhccccceEEEEEe-----
Confidence            589999988   678999999999999998887421    11111      01111 11 112224578887543     


Q ss_pred             CCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEE
Q 019794          194 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLT  228 (335)
Q Consensus       194 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~i  228 (335)
                                   .-..+..+++.|.+.|.+.+++
T Consensus        65 -------------p~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          65 -------------PPKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             -------------CHHHHHHHHHHHHHTTCCEEEE
T ss_pred             -------------CHHHHHHHHHHHHhcCCceEEe
Confidence                         2233457788888889876654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.56  E-value=0.042  Score=42.81  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=49.7

Q ss_pred             CCCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCcccccc-ccCCC---ceEEEeccccchhccCCCEEEE
Q 019794          111 GIGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH-HFRNP---RFELIRHDVVEPILLEVDQIYH  186 (335)
Q Consensus       111 ~~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~-~~~~~---~~~~~~~D~~~~~~~~vD~Vih  186 (335)
                      ..+.+||+|+|.|-+.-+|+-++..|+++|+.|................ .....   .+..+..|...+....+|+||.
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            4468899999999999999999999999999998775431110000000 00000   1111222334445567999998


Q ss_pred             ccCC
Q 019794          187 LACP  190 (335)
Q Consensus       187 ~A~~  190 (335)
                      .+|.
T Consensus       104 avG~  107 (171)
T d1edza1         104 GVPS  107 (171)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            7764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.54  E-value=0.043  Score=43.65  Aligned_cols=69  Identities=14%  Similarity=0.146  Sum_probs=48.2

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ....++++.|.| .|.||+.+++.+...|.+|+..++.........       .......+..++.+..+|+|+.+.
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-------~~~~~~~~~l~~ll~~sD~v~l~~  111 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-------SYQATFHDSLDSLLSVSQFFSLNA  111 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-------HHTCEECSSHHHHHHHCSEEEECC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhh-------cccccccCCHHHHHhhCCeEEecC
Confidence            346789999999 599999999999999999999886543222111       111233345567778889887544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.49  E-value=0.04  Score=42.92  Aligned_cols=37  Identities=22%  Similarity=0.128  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTG  152 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~  152 (335)
                      .+.+|+|.|+ |.+|...+..+...|. .|+++++++.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k   65 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK   65 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHH
Confidence            4569999998 6689999999999986 78888776543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.38  E-value=0.088  Score=37.90  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh---CCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLID---RGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~---~g~~V~~~~r~~~~  152 (335)
                      .++++|.|| |++|-+++..|.+   .|.+|.++.+.+.-
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            358999995 9999999976554   47899999987653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.30  E-value=0.047  Score=42.48  Aligned_cols=113  Identities=12%  Similarity=0.010  Sum_probs=61.8

Q ss_pred             CeEEEEcCC-chhHHHHHHHHHhCC----CeEEEEecCCCCCccccccc-------cCCCceEEEeccccchhccCCCEE
Q 019794          117 LRIVVTGGA-GFVGSHLVDKLIDRG----DEVIVIDNFFTGRKDNLVHH-------FRNPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       117 ~~vlVTGat-G~IG~~l~~~Ll~~g----~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      +||.|.||+ .+.+..++..+....    .+++.++.++...+.+....       ............-..+++.++|+|
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV   81 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV   81 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence            589999973 344455544444432    38888887654322111111       112334444444445678999999


Q ss_pred             EEccCCCCCCCccCC----------------h--hhHHhhHHHHHHHHHHHHHHcCC--eEEEEe
Q 019794          185 YHLACPASPVHYKYN----------------P--VKTIKTNVMGTLNMLGLAKRVGA--KFLLTS  229 (335)
Q Consensus       185 ih~A~~~~~~~~~~~----------------~--~~~~~~Nv~gt~~ll~~a~~~~~--r~v~iS  229 (335)
                      |..|+.........+                +  ......|+.-.+.+++..++...  .++.+|
T Consensus        82 v~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          82 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999975321111000                0  11234577777888888888775  344444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.28  E-value=0.047  Score=42.78  Aligned_cols=35  Identities=14%  Similarity=0.183  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      ++||+|.|| |..|...+..|.++|+ +|+++.+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999995 9999999999999998 5999988643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.079  Score=40.91  Aligned_cols=36  Identities=25%  Similarity=0.299  Sum_probs=32.7

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN  148 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r  148 (335)
                      ...||+|+|.|.+.-+|+-++..|.++|+.|+++..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~   69 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR   69 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence            468999999999999999999999999999988754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.03  E-value=0.053  Score=36.31  Aligned_cols=35  Identities=20%  Similarity=0.090  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      +|+|.|.|| |.+|+-++.+-.+.|.++++++-+..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            478999994 99999999999999999999986543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.01  E-value=0.063  Score=46.02  Aligned_cols=35  Identities=29%  Similarity=0.585  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      +.|+|+|.|| |.-|...+..|.+.|++|.++....
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            4689999995 9999999999999999999998754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.00  E-value=0.052  Score=42.38  Aligned_cols=70  Identities=17%  Similarity=0.040  Sum_probs=43.4

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccccc---h------hccCCCEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE---P------ILLEVDQI  184 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~---~------~~~~vD~V  184 (335)
                      .+.+|+|.|+ |.||...+..+...|+ .|++.+.++.+. + ..+.+...  ++++....+   .      .-.++|+|
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~-~a~~~Ga~--~~i~~~~~~~~~~~~~~~~~~~G~d~v  102 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-P-KAKALGAT--DCLNPRELDKPVQDVITELTAGGVDYS  102 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-H-HHHHTTCS--EEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-H-HHHHhCCC--cccCCccchhhhhhhHhhhhcCCCcEE
Confidence            3569999985 9999999999999998 567777654322 1 22222211  222221111   1      22579999


Q ss_pred             EEccC
Q 019794          185 YHLAC  189 (335)
Q Consensus       185 ih~A~  189 (335)
                      |.+.|
T Consensus       103 ie~~G  107 (174)
T d1e3ia2         103 LDCAG  107 (174)
T ss_dssp             EESSC
T ss_pred             EEecc
Confidence            99986

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.96  E-value=0.32  Score=36.16  Aligned_cols=86  Identities=15%  Similarity=0.165  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGA---GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGat---G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      +.++|.|.|++   +..|..+++.|.+.|++|+.+.-.    ..+....       -.-.++ .+.-..+|+|+-+.   
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~----~~~i~G~-------~~~~sl-~dlp~~iD~v~i~v---   82 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK----YEEVLGR-------KCYPSV-LDIPDKIEVVDLFV---   82 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT----CSEETTE-------ECBSSG-GGCSSCCSEEEECS---
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc----ccccCCC-------cccccc-cccCccceEEEEEe---
Confidence            35689999998   789999999999999998887432    1111100       001111 12234588887643   


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                                     +-..+..+++.|.+.|++.+.+.+
T Consensus        83 ---------------p~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          83 ---------------KPKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             ---------------CHHHHHHHHHHHHHHTCSEEEECT
T ss_pred             ---------------CHHHHHHHHHHHHHhCCCEEEEec
Confidence                           233455788888888987666644

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.95  E-value=0.11  Score=40.24  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN  148 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r  148 (335)
                      ..+||+|+|.|.+.-+|+-|+..|+++|+.|..+..
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            578999999999999999999999999999999865

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.94  E-value=0.04  Score=42.73  Aligned_cols=70  Identities=19%  Similarity=0.062  Sum_probs=41.0

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEeccc----cch-----hccCCCEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV----VEP-----ILLEVDQI  184 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~----~~~-----~~~~vD~V  184 (335)
                      .+.+|+|.|+ |.+|...+..+...|. .|+++++++.+ .+.. ..+...  ++++.+-    ...     .-.++|+|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~~a-k~lGa~--~~i~~~~~~~~~~~~~~~~~~~g~D~v  102 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-FARA-KEFGAT--ECINPQDFSKPIQEVLIEMTDGGVDYS  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHH-HHHTCS--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-HHHH-HHhCCc--EEEeCCchhhHHHHHHHHHcCCCCcEe
Confidence            3568999997 6789999888888897 56666554332 2222 222222  2222211    111     12469999


Q ss_pred             EEccC
Q 019794          185 YHLAC  189 (335)
Q Consensus       185 ih~A~  189 (335)
                      |.+.|
T Consensus       103 id~~G  107 (176)
T d2fzwa2         103 FECIG  107 (176)
T ss_dssp             EECSC
T ss_pred             eecCC
Confidence            99886

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.91  E-value=0.071  Score=43.67  Aligned_cols=35  Identities=31%  Similarity=0.288  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+||+|.|| |..|..++..|.++|++|+++.+.+.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            458999996 99999999999999999999988643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.89  E-value=0.042  Score=42.68  Aligned_cols=74  Identities=20%  Similarity=0.197  Sum_probs=42.6

Q ss_pred             CCeEEEEcCCchhHHH-HHHHHHhC-C----CeEEEEecCCCCCccc---cccc--cCCCceEEEeccccchhccCCCEE
Q 019794          116 RLRIVVTGGAGFVGSH-LVDKLIDR-G----DEVIVIDNFFTGRKDN---LVHH--FRNPRFELIRHDVVEPILLEVDQI  184 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~-l~~~Ll~~-g----~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~vD~V  184 (335)
                      ..||.|.|| |.+|.. ++..|+.. .    .+|+++|.+++..+..   +...  .......+.......+++.++|+|
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            347999998 445543 44444443 1    3899998876543211   1110  112233444444455678999999


Q ss_pred             EEccCC
Q 019794          185 YHLACP  190 (335)
Q Consensus       185 ih~A~~  190 (335)
                      |..|+.
T Consensus        82 vitag~   87 (167)
T d1u8xx1          82 MAHIRV   87 (167)
T ss_dssp             EECCCT
T ss_pred             EECCCc
Confidence            999975

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.86  E-value=0.048  Score=42.53  Aligned_cols=36  Identities=22%  Similarity=0.487  Sum_probs=31.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      |+|-|.| .|.+|..+++.|++.|++|.+.+|+.+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            5788888 79999999999999999999999875543

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.85  E-value=0.11  Score=39.72  Aligned_cols=69  Identities=13%  Similarity=0.210  Sum_probs=36.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC-CC-eEEEEe-cCCCCCccccccccCCCceEEEec--c-c-cchhccCCCEEEEcc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR-GD-EVIVID-NFFTGRKDNLVHHFRNPRFELIRH--D-V-VEPILLEVDQIYHLA  188 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~-g~-~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~--D-~-~~~~~~~vD~Vih~A  188 (335)
                      ..|+.|.| +|.||+.+..++++. .. +++++. |+.........+.   ..+.+...  | + .+..+.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~---~~i~~~~~~~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTTYAGVEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEESSHHHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh---cCCcccccceeeeeecccccccCEEEEcC
Confidence            35899999 899999765555543 33 676664 4433222111111   12222222  1 1 122456799999753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.85  E-value=0.11  Score=40.29  Aligned_cols=32  Identities=25%  Similarity=0.498  Sum_probs=25.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEec
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN  148 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r  148 (335)
                      .+||.|-| -|-||+.+++.|.++.. +|+.+..
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd   34 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITK   34 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEec
Confidence            45899999 59999999999988764 6666653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.83  E-value=0.063  Score=40.85  Aligned_cols=34  Identities=15%  Similarity=0.219  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNF  149 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~  149 (335)
                      ||+|.|.|+||.||...++-+.+..  .+|.++.-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            6789999999999999999887764  477777653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.82  E-value=0.062  Score=44.49  Aligned_cols=34  Identities=29%  Similarity=0.261  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      +|||+|.|| |.-|...+.+|.+.|++|.++.+..
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            589999995 9999999999999999999998754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.58  E-value=0.018  Score=45.18  Aligned_cols=69  Identities=16%  Similarity=0.176  Sum_probs=42.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEec---cccch---hc--cCCCEEEE
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRH---DVVEP---IL--LEVDQIYH  186 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---D~~~~---~~--~~vD~Vih  186 (335)
                      +.+|+|.|+ |.||...+..+...|+ +|+++++++.+..  ..+.+..  .++++.   +..+.   ..  .++|+||.
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~--~a~~lGa--~~~i~~~~~~~~~~v~~~t~g~G~D~vid  102 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE--AAKFYGA--TDILNYKNGHIEDQVMKLTNGKGVDRVIM  102 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHH--HHHHHTC--SEEECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHH--HHHhhCc--cccccccchhHHHHHHHHhhccCcceEEE
Confidence            558999986 9999999888888897 7888887543222  1122221  122222   22221   11  35999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      ++|
T Consensus       103 ~~g  105 (174)
T d1jqba2         103 AGG  105 (174)
T ss_dssp             CSS
T ss_pred             ccC
Confidence            987

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.54  E-value=0.059  Score=44.62  Aligned_cols=31  Identities=26%  Similarity=0.425  Sum_probs=28.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |+|.|| |.+|..++.+|+++|.+|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899995 9999999999999999999999864

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.37  E-value=0.13  Score=40.00  Aligned_cols=32  Identities=25%  Similarity=0.491  Sum_probs=26.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEec
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN  148 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r  148 (335)
                      |++|.|-| -|.||+.+++.|..++. +|+.+..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            56899998 79999999999988875 6666543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.33  E-value=0.066  Score=40.72  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC--CCeEEEEecC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR--GDEVIVIDNF  149 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~--g~~V~~~~r~  149 (335)
                      +|+|.|.|+||.||...++-+.+.  .++|+++.-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            579999999999999999888775  3577777654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.27  E-value=0.077  Score=41.81  Aligned_cols=66  Identities=18%  Similarity=0.228  Sum_probs=45.5

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      ...++++.|.| .|.||+.+++.+...|.+|+..++........  .    ..+..   .-.++.+..+|+|+.+.
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~----~~~~~---~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--Q----LGIEL---LSLDDLLARADFISVHL  106 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--H----HTCEE---CCHHHHHHHCSEEEECC
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHh--h----cCcee---ccHHHHHhhCCEEEEcC
Confidence            45788999988 69999999999999999999988753321111  0    01111   22456778899887654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.95  E-value=0.088  Score=43.02  Aligned_cols=36  Identities=31%  Similarity=0.395  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      ++++++|+|-| -|-+|+++++.|.+.|.+|++.+.+
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc
Confidence            46789999999 6999999999999999999988764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.66  E-value=0.068  Score=41.00  Aligned_cols=36  Identities=22%  Similarity=0.104  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .+.+|+|.|+ |.||...+..+...|.+|+++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~   62 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDA   62 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhh
Confidence            3568999886 99999999888888999999988644

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.43  E-value=0.11  Score=40.59  Aligned_cols=32  Identities=22%  Similarity=0.534  Sum_probs=26.3

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEec
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDN  148 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r  148 (335)
                      |-||.|-| .|.||+.+++.|.+++. +|+.+..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            34799998 79999999999998764 7777754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.32  E-value=0.19  Score=40.69  Aligned_cols=38  Identities=21%  Similarity=0.331  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      ....++|+|.|| |..|...+..|.++|++|.++.+...
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            346789999995 99999999999999999999987543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.20  E-value=0.093  Score=40.25  Aligned_cols=69  Identities=14%  Similarity=0.132  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLAC  189 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~  189 (335)
                      ....||+++|.| =|++|+-++..|...|.+|+++..++-..-+...     ..+++..   .++++...|++|-+.|
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-----dGf~v~~---~~~a~~~aDi~vTaTG   87 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVM-----EGFNVVT---LDEIVDKGDFFITCTG   87 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-----TTCEECC---HHHHTTTCSEEEECCS
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHh-----cCCccCc---hhHccccCcEEEEcCC
Confidence            456789999998 6999999999999999999999887533222222     2223322   3456677888887665

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.19  E-value=0.16  Score=38.33  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=28.3

Q ss_pred             eEEEE-cCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          118 RIVVT-GGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       118 ~vlVT-GatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      .++|. .++||||.+++..|.+.|.+|.++.+...
T Consensus        41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            55554 45699999999999999999999988643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.18  E-value=0.14  Score=42.98  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          114 RRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      .+.|+|+|.|| |..|...+..|.++|++|.++.+..
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34579999995 9999999999999999999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.02  E-value=0.11  Score=42.87  Aligned_cols=33  Identities=24%  Similarity=0.591  Sum_probs=29.9

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |+|+|.|| |.-|...+..|.++|++|.++.+..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999996 9999999999999999999998753

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.00  E-value=0.17  Score=38.88  Aligned_cols=35  Identities=20%  Similarity=0.068  Sum_probs=28.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      +.++|+|.|| |++|-+++..|.+.|.+|.++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            4568999995 9999999999999998766665544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=90.78  E-value=0.33  Score=35.29  Aligned_cols=64  Identities=16%  Similarity=0.104  Sum_probs=45.0

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchh------ccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPI------LLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~vD~Vih~A  188 (335)
                      |.|+|.|. |-+|..++++|.  +.+|++++.++.....     .....+.++.+|.+++.      +.+++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~-----~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKK-----VLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHH-----HHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHH-----HHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            45888885 889999999984  5678888765443221     12346788899987763      46788998654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.68  E-value=0.13  Score=40.06  Aligned_cols=72  Identities=15%  Similarity=-0.003  Sum_probs=45.6

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCC-ceEEEeccccch------hccCCCEEEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNP-RFELIRHDVVEP------ILLEVDQIYH  186 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~------~~~~vD~Vih  186 (335)
                      .+.+|+|+|+ |.+|...+..+...|. +|++++.++++.+-  ...+... .++..+.|....      .-.++|++|.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~--Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK--AMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH--HHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH--HHhcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence            4568999985 9999999999999996 89999887554331  1111111 112122222111      2246999999


Q ss_pred             ccC
Q 019794          187 LAC  189 (335)
Q Consensus       187 ~A~  189 (335)
                      +.+
T Consensus       106 ~~g  108 (176)
T d1d1ta2         106 VIG  108 (176)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            886

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.57  E-value=0.057  Score=41.83  Aligned_cols=69  Identities=14%  Similarity=0.042  Sum_probs=40.8

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEecc--ccchh-----ccCCCEEEEc
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHD--VVEPI-----LLEVDQIYHL  187 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--~~~~~-----~~~vD~Vih~  187 (335)
                      +.+|+|.|+ |.+|...+..+...|. .|+++++++.+. +...+ +.  ..+++..+  ..+..     -.++|+||.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~-~~~~~-~g--a~~~i~~~~~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAER-LG--ADHVVDARRDPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHH-TT--CSEEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH-HHHhh-cc--cceeecCcccHHHHHHHhhCCCCceEEEEe
Confidence            568999885 9999999888877886 666666653221 11111 11  12233322  11111     1359999998


Q ss_pred             cC
Q 019794          188 AC  189 (335)
Q Consensus       188 A~  189 (335)
                      .|
T Consensus       108 ~g  109 (172)
T d1h2ba2         108 VG  109 (172)
T ss_dssp             SC
T ss_pred             cC
Confidence            86

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.69  E-value=0.28  Score=35.09  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhC---CCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDR---GDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~---g~~V~~~~r~~~  151 (335)
                      +++++|.|| |++|-+++..|.+.   |.+|.++.+...
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            358999996 99999999766544   568999987654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.50  E-value=0.19  Score=42.42  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          112 IGRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       112 ~~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      ..+++++|+|-| -|-+|+++++.|.+.|.+|+.++..
T Consensus        32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            357889999999 5999999999999999999988754

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.32  E-value=0.21  Score=39.07  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=27.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--eEEEEecCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD--EVIVIDNFF  150 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~--~V~~~~r~~  150 (335)
                      |||+|.|| |++|-.++..|.+.+.  +|+++.+..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999995 8999999999988754  788887754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.29  E-value=0.056  Score=43.00  Aligned_cols=36  Identities=28%  Similarity=0.130  Sum_probs=27.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      .+.+|+|.|+ |.||...+..+...|. +|++++.++.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~   61 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA   61 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch
Confidence            3569999985 9999888877777777 7888877543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=88.93  E-value=1.1  Score=32.86  Aligned_cols=88  Identities=14%  Similarity=0.112  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCC---chhHHHHHHHHHhCCCeEEEEecCCCCCccccccccCCCceEEEeccccchhccCCCEEEEccCCC
Q 019794          115 RRLRIVVTGGA---GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIYHLACPA  191 (335)
Q Consensus       115 ~~~~vlVTGat---G~IG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A~~~  191 (335)
                      +.|+|.|.||+   +-.|..+++.|.+.|+.++.+--....  ....      .. ..-.++ .+.-..+|.|+-+.   
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~--~~i~------g~-~~~~~l-~~i~~~iD~v~v~~---   78 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG--EELF------GE-EAVASL-LDLKEPVDILDVFR---   78 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT--SEET------TE-ECBSSG-GGCCSCCSEEEECS---
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc--ceee------ce-ecccch-hhccCCCceEEEec---
Confidence            34689999998   568999999999999998877432110  1110      00 001111 11224578887653   


Q ss_pred             CCCCccCChhhHHhhHHHHHHHHHHHHHHcCCeEEEEec
Q 019794          192 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST  230 (335)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r~v~iSS  230 (335)
                                     +-.....+++.|.+.|++.+++.+
T Consensus        79 ---------------p~~~v~~~v~~~~~~g~k~i~~q~  102 (136)
T d1iuka_          79 ---------------PPSALMDHLPEVLALRPGLVWLQS  102 (136)
T ss_dssp             ---------------CHHHHTTTHHHHHHHCCSCEEECT
T ss_pred             ---------------cHHHHHHHHHHHHhhCCCeEEEec
Confidence                           122334677778888887666544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=88.93  E-value=0.66  Score=36.03  Aligned_cols=36  Identities=22%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGR  153 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~~~  153 (335)
                      -+|+|.|| |-.|..=++.....|..|.++|.+....
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~   65 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK   65 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence            38999996 9999999999999999999999876543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.63  E-value=0.16  Score=42.22  Aligned_cols=32  Identities=19%  Similarity=0.318  Sum_probs=29.3

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      +|+|.|| |-.|..++..|.+.|.+|.++.+.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6999996 8999999999999999999998764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.41  E-value=0.22  Score=41.15  Aligned_cols=31  Identities=26%  Similarity=0.489  Sum_probs=28.2

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |+|.|| |.+|..++.+|+++|.+|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788885 9999999999999999999998853

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.38  E-value=0.17  Score=38.76  Aligned_cols=73  Identities=29%  Similarity=0.336  Sum_probs=43.0

Q ss_pred             CeEEEEcCCchhHHHHHHH-HHhC-----CCeEEEEecCCCCCcccc--ccccCCCceEEEeccccchhccCCCEEEEcc
Q 019794          117 LRIVVTGGAGFVGSHLVDK-LIDR-----GDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILLEVDQIYHLA  188 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~-Ll~~-----g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~vD~Vih~A  188 (335)
                      |||.|.|| |.+|...+-. |++.     ..++.++|.+++......  .+................+.+.++|+||..|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            58999998 4466555533 3221     348999988765332111  1111112333444444567889999999999


Q ss_pred             CC
Q 019794          189 CP  190 (335)
Q Consensus       189 ~~  190 (335)
                      +.
T Consensus        80 ~~   81 (162)
T d1up7a1          80 RP   81 (162)
T ss_dssp             CT
T ss_pred             cc
Confidence            75

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.15  E-value=0.21  Score=42.09  Aligned_cols=34  Identities=21%  Similarity=0.393  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |..|+|.|| |.-|..++..|++.|.+|.++.++.
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            347899995 9999999999999999999997753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=88.13  E-value=0.29  Score=37.49  Aligned_cols=70  Identities=17%  Similarity=0.040  Sum_probs=41.3

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCCCCccccccccCCCceEEEecccc----ch-----hccCCCEE
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV----EP-----ILLEVDQI  184 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~----~~-----~~~~vD~V  184 (335)
                      .+.+|+|.|+ |.+|...+..+...|. .|+++++.+++.+ ... .+.  .-++++.+-.    ++     .-.++|++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~-~a~-~~G--Ad~~in~~~~~~~~~~~~~~~~~~G~d~v  102 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE-KAK-VFG--ATDFVNPNDHSEPISQVLSKMTNGGVDFS  102 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHH-HTT--CCEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH-HHH-HcC--CcEEEcCCCcchhHHHHHHhhccCCccee
Confidence            4568999986 6677777778888876 6777776544322 111 122  1223332111    11     12469999


Q ss_pred             EEccC
Q 019794          185 YHLAC  189 (335)
Q Consensus       185 ih~A~  189 (335)
                      |.+.|
T Consensus       103 id~~G  107 (175)
T d1cdoa2         103 LECVG  107 (175)
T ss_dssp             EECSC
T ss_pred             eeecC
Confidence            99886

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.03  E-value=0.37  Score=40.03  Aligned_cols=34  Identities=18%  Similarity=0.377  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      +..||+|.|| |.-|...+.+|.++|++|.++...
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            4458999995 999999999999999999999664

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.61  E-value=0.36  Score=41.08  Aligned_cols=36  Identities=19%  Similarity=0.267  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCC--CeEEEEecCCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRG--DEVIVIDNFFT  151 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g--~~V~~~~r~~~  151 (335)
                      .+|+|+|.|| |.-|...+..|+++|  ++|+++.+...
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            5689999995 999999999999887  49999988743

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.56  E-value=0.25  Score=41.26  Aligned_cols=32  Identities=44%  Similarity=0.742  Sum_probs=28.5

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      +|+|.|| |-+|..++.+|+++|. +|.+++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6899995 9999999999999996 799998864

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.47  E-value=0.047  Score=44.13  Aligned_cols=26  Identities=31%  Similarity=0.488  Sum_probs=23.3

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeE
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEV  143 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V  143 (335)
                      |||+|.|| |-+|..++.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            68999995 999999999999999754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.04  E-value=0.32  Score=38.38  Aligned_cols=31  Identities=29%  Similarity=0.379  Sum_probs=28.3

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |+|.| +|.-|...+..|+++|.+|.++.+..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78889 59999999999999999999998864

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.78  E-value=2  Score=30.90  Aligned_cols=91  Identities=14%  Similarity=0.009  Sum_probs=53.5

Q ss_pred             CeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecCCCCCccccccccCCCceEEEeccccchhc-cCCCEEEEccCCCCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL-LEVDQIYHLACPASPV  194 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~vD~Vih~A~~~~~~  194 (335)
                      .+|+|.|| |.+|++|++.+.. .+++++++..+...+.....     ..+.+...|...... ..+++++-+..     
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I-----~Gi~V~~~~~l~~~~~~~i~iai~~i~-----   72 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV-----RGGVIEHVDLLPQRVPGRIEIALLTVP-----   72 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE-----TTEEEEEGGGHHHHSTTTCCEEEECSC-----
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE-----CCEEEecHHHHHHHHhhcccEEEEeCC-----
Confidence            38999995 9999999987754 36688777664332222111     234445555444333 34666655431     


Q ss_pred             CccCChhhHHhhHHHHHHHHHHHHHHcCCe-EEEEecc
Q 019794          195 HYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTS  231 (335)
Q Consensus       195 ~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~r-~v~iSS~  231 (335)
                                   -...+.+++.|.+.|++ +..++..
T Consensus        73 -------------~~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          73 -------------REAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             -------------HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             -------------HHHHHHHHHHHHHcCCCEEeecCce
Confidence                         12234688888888885 5555543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.77  E-value=0.41  Score=35.22  Aligned_cols=35  Identities=37%  Similarity=0.408  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHh----CCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLID----RGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~----~g~~V~~~~r~~~  151 (335)
                      .++++|.|| |++|-+++..|.+    .|.+|+.+.+...
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            458999985 9999999998863    5889999988654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.19  E-value=0.51  Score=38.27  Aligned_cols=34  Identities=21%  Similarity=0.328  Sum_probs=29.7

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFFT  151 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~~  151 (335)
                      ++|+|.|| |..|..++..|.+.|. +|.++.+...
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            58999995 9999999999999995 8999988654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.19  E-value=0.46  Score=35.88  Aligned_cols=35  Identities=20%  Similarity=0.095  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCCC
Q 019794          116 RLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFFT  151 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~~  151 (335)
                      +.+|+|.|+ |.||...+..+...|++|+++++++.
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~   62 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE   62 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH
Confidence            558999875 88999998888888999999987544

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.84  E-value=0.44  Score=35.81  Aligned_cols=31  Identities=35%  Similarity=0.437  Sum_probs=26.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      ||+|.|| |++|-+++..|. ++.+|.++.+..
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999995 999999999885 577999998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.32  E-value=0.63  Score=37.97  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      .+++++|+|-| -|-+|+++++.|.+.|.+|+.++..
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            46788999998 6999999999999999999887754

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=84.31  E-value=0.27  Score=37.82  Aligned_cols=30  Identities=27%  Similarity=0.392  Sum_probs=24.8

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN  148 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r  148 (335)
                      +|+|.| +|++|-+++..|.+.|.++.++.+
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            599999 599999999999999986555444

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.83  E-value=0.55  Score=37.22  Aligned_cols=32  Identities=22%  Similarity=0.535  Sum_probs=28.2

Q ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          118 RIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       118 ~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      +|+|.|| |.-|...+..|.++|. +|+++.+..
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6899995 9999999999999996 799998754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.52  E-value=1  Score=33.79  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCchhHHHHHHHHHhCCC-eEEEEecCC
Q 019794          115 RRLRIVVTGGAGFVGSHLVDKLIDRGD-EVIVIDNFF  150 (335)
Q Consensus       115 ~~~~vlVTGatG~IG~~l~~~Ll~~g~-~V~~~~r~~  150 (335)
                      -+++|+|.|| |.+|...+..+++.|+ .|+++.|..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3558999985 9999999999999997 677887754

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=82.88  E-value=1.5  Score=34.90  Aligned_cols=106  Identities=13%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCchhHH-HHHHHHHhC-CCeEEEEe-cCCCCCccccccccCCCceEEEeccccchhcc--CCCEEEEccCC
Q 019794          116 RLRIVVTGGAGFVGS-HLVDKLIDR-GDEVIVID-NFFTGRKDNLVHHFRNPRFELIRHDVVEPILL--EVDQIYHLACP  190 (335)
Q Consensus       116 ~~~vlVTGatG~IG~-~l~~~Ll~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~vD~Vih~A~~  190 (335)
                      .-+|.|.| .|.+|+ +++..|... +.+|+.+. ++++.. +...+.+..........+..++.+.  ++|+|+-+...
T Consensus        33 ~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a-~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~  110 (221)
T d1h6da1          33 RFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKA-KIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN  110 (221)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH-HHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred             CEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHH-HHHHHhhccccccccccCchhhhcccccceeeeeccch
Confidence            34899999 589996 566666554 45777554 332221 2222222222222223333444443  58888764421


Q ss_pred             CCCCCcc-------CC----hhhHHhhHHHHHHHHHHHHHHcCCeE
Q 019794          191 ASPVHYK-------YN----PVKTIKTNVMGTLNMLGLAKRVGAKF  225 (335)
Q Consensus       191 ~~~~~~~-------~~----~~~~~~~Nv~gt~~ll~~a~~~~~r~  225 (335)
                        ..+.+       ..    -++-+..|++....|++++++.++.+
T Consensus       111 --~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~  154 (221)
T d1h6da1         111 --SLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKL  154 (221)
T ss_dssp             --GGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred             --hhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcE
Confidence              11100       00    01123468888889999998887543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.24  E-value=0.7  Score=38.83  Aligned_cols=33  Identities=30%  Similarity=0.458  Sum_probs=29.6

Q ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          117 LRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       117 ~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      ..|+|.|| |.-|...+..|.+.|.+|+++.+.+
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            36999996 9999999999999999999998754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.07  E-value=1.9  Score=34.91  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHh-CCCeEEEEecC
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLID-RGDEVIVIDNF  149 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~-~g~~V~~~~r~  149 (335)
                      ..++++|+|-|- |-+|+++++.|.+ .|..|+.+...
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            367889999995 9999999999986 48888887654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=82.02  E-value=0.72  Score=37.91  Aligned_cols=35  Identities=17%  Similarity=0.237  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCchhHHHHHHHHHhCCCeEEEEec
Q 019794          113 GRRRLRIVVTGGAGFVGSHLVDKLIDRGDEVIVIDN  148 (335)
Q Consensus       113 ~~~~~~vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r  148 (335)
                      .+++++|+|-| -|-+|+++++.|.+.|.+|+.+..
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            46788999999 699999999999999999988765

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=81.40  E-value=0.69  Score=39.59  Aligned_cols=30  Identities=20%  Similarity=0.299  Sum_probs=27.7

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNF  149 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~  149 (335)
                      |+|.| +|+-|..++.+|.+.|.+|.++.+.
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            78888 6999999999999999999999985

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=81.37  E-value=0.8  Score=37.57  Aligned_cols=39  Identities=23%  Similarity=0.244  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCchhHHHH-----HHHHHhCCCeEEEEecCCCC
Q 019794          114 RRRLRIVVTGGAGFVGSHL-----VDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       114 ~~~~~vlVTGatG~IG~~l-----~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      ..+.+|+|+.|=|++|+..     +..|+++|++|.+++.++..
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~   60 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA   60 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            4567899998899999876     68888999999999998653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.54  E-value=0.9  Score=37.89  Aligned_cols=31  Identities=35%  Similarity=0.523  Sum_probs=27.8

Q ss_pred             EEEEcCCchhHHHHHHHHHhCCCeEEEEecCC
Q 019794          119 IVVTGGAGFVGSHLVDKLIDRGDEVIVIDNFF  150 (335)
Q Consensus       119 vlVTGatG~IG~~l~~~Ll~~g~~V~~~~r~~  150 (335)
                      |+|.|| |.-|...+..|.++|++|+++.+..
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788885 9999999999999999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.37  E-value=0.68  Score=37.90  Aligned_cols=36  Identities=17%  Similarity=0.250  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCchhHHHH-----HHHHHhCCCeEEEEecCCCC
Q 019794          116 RLRIVVTGGAGFVGSHL-----VDKLIDRGDEVIVIDNFFTG  152 (335)
Q Consensus       116 ~~~vlVTGatG~IG~~l-----~~~Ll~~g~~V~~~~r~~~~  152 (335)
                      |++|.|+| -|++|+..     +..|++.|++|.++|.++..
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~   41 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA   41 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence            57899998 78888754     55888899999999998653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.35  E-value=0.98  Score=37.78  Aligned_cols=32  Identities=28%  Similarity=0.486  Sum_probs=23.1

Q ss_pred             CeEEEEcC-C-chh--HHHHHHHHHhCCCeEEEEec
Q 019794          117 LRIVVTGG-A-GFV--GSHLVDKLIDRGDEVIVIDN  148 (335)
Q Consensus       117 ~~vlVTGa-t-G~I--G~~l~~~Ll~~g~~V~~~~r  148 (335)
                      |||+|++| | |-+  ..+|+++|.++|++|..+..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            57877764 3 333  34588999999999988764