Citrus Sinensis ID: 019819

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGKST
ccEEEEEcEEEccccEEEEEEEEcccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccccccEEEEEccccccccccccccccEEEEccccccHHHHHHHHccccccEEEEEcccccccEEEEccccccccccEEEEccccccccccEEEEEcEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEccccEEEEEccccEEEEEEEccccc
cccccccccccccccEEEEEEEEccccccEEEEEEccccEEEEEcccccccccccccccccccccccccccHHHHHccccccccccccccccEEEEEEEcccccccEEEEEEEEEEccccccccccEEEEccccccccccccccccccEEEcccccccHHHHHHHccccccEEEEEEccccccEEEEcccccccccEEEEEcccccccccEEEEEEEEEEEccEEEEcccccEEEEcccEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEccccccEEEEccccEEEEEccccEEEEEEEccccc
MYVSWIEFFFFPIFSYFAvnltvgkppklfdfdfdtgsdltwvqcdapctgctkppekqykphknivpcsnprcaalhwpnpprckhpndqcdyeieygdggssigalvtdlfplrfsngsvfnvpltfgcgynqhnpgplsppdtagvlglgrgrISIVSQLREYGLIRNVIGhcigqngrgvlflgdgkvpssgvawtpmlqnsadlkhyilgpaellysgkscglkdltlifdsgasyayFTSRVYQEIVSLIMRDLigtplklapddktlpicwrgpfkalgQVTEYFKPLAlsftnrrnsvrlvvppeAYLVISVSTSIIIIAYLTGKST
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALsftnrrnsvrlVVPPEAylvisvstsIIIIAYLTGKST
MYVSWIEffffpifsyfAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLvisvstsiiiiAYLTGKST
*YVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTK*****YKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN********TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLT****
***SWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPP***YKP*KNIVPCSNPRCAA************NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLI**********KTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTG***
MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGKST
*****IEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLT****
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiii
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MYVSWIEFFFFPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGKST
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query335 2.2.26 [Sep-21-2011]
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.901 0.736 0.403 7e-58
Q0IU52410 Aspartic proteinase Asp1 no no 0.901 0.736 0.393 2e-56
Q9S9K4475 Aspartic proteinase-like no no 0.832 0.587 0.299 2e-22
Q766C3437 Aspartic proteinase nepen N/A no 0.653 0.501 0.311 8e-18
Q3EBM5447 Probable aspartic proteas no no 0.797 0.597 0.288 1e-16
Q766C2438 Aspartic proteinase nepen N/A no 0.892 0.682 0.264 1e-16
Q9LX20528 Aspartic proteinase-like no no 0.698 0.443 0.296 3e-15
Q6XBF8437 Aspartic proteinase CDR1 no no 0.704 0.540 0.267 2e-12
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.6 0.402 0.320 3e-11
Q9LZL3453 Aspartic proteinase PCS1 no no 0.782 0.578 0.254 4e-10
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function desciption
 Score =  224 bits (571), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 182/320 (56%), Gaps = 18/320 (5%)

Query: 11  FPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPH-KNIVPC 69
           +PI  +F V + +G P K +  D DTGS LTW+QCD PC  C K P   YKP  K  V C
Sbjct: 33  YPIGHFF-VTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGLYKPELKYAVKC 91

Query: 70  SNPRCAALH--WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL 127
           +  RCA L+     P +C  P +QC Y I+Y  GGSSIG L+ D F L  SNG+     +
Sbjct: 92  TEQRCADLYADLRKPMKCG-PKNQCHYGIQY-VGGSSIGVLIVDSFSLPASNGT-NPTSI 148

Query: 128 TFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLF 186
            FGCGYNQ       P    G+LGLGRG+++++SQL+  G+I ++V+GHCI   G+G LF
Sbjct: 149 AFGCGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGHCISSKGKGFLF 208

Query: 187 LGDGKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTLIFDSGASYAYF 244
            GD KVP+SGV W+PM   + + KHY    G  +   + K      + +IFDSGA+Y YF
Sbjct: 209 FGDAKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEVIFDSGATYTYF 265

Query: 245 TSRVYQEIVSLIMRDLIGT---PLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSF 299
             + Y   +S++   L        ++   D+ L +CW+G    + + +V + F+ L+L F
Sbjct: 266 ALQPYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKGKDKIRTIDEVKKCFRSLSLKF 325

Query: 300 TNRRNSVRLVVPPEAYLVIS 319
            +      L +PPE YL+IS
Sbjct: 326 ADGDKKATLEIPPEHYLIIS 345
Possesses protease activity in vitro.
Oryza sativa subsp. indica (taxid: 39946)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query335
15219354405 aspartyl protease-like protein [Arabidop 0.931 0.770 0.566 1e-104
297841447410 hypothetical protein ARALYDRAFT_475850 [ 0.910 0.743 0.575 1e-101
255558640424 nucellin, putative [Ricinus communis] gi 0.922 0.728 0.543 2e-96
224082314410 predicted protein [Populus trichocarpa] 0.919 0.751 0.552 1e-95
30699261 466 aspartyl protease-like protein [Arabidop 0.910 0.654 0.551 7e-95
30699263432 aspartyl protease-like protein [Arabidop 0.910 0.706 0.551 8e-95
297842525 467 hypothetical protein ARALYDRAFT_476912 [ 0.931 0.668 0.542 2e-94
356554625 452 PREDICTED: aspartic proteinase Asp1-like 0.901 0.668 0.549 3e-94
356509401407 PREDICTED: aspartic proteinase Asp1-like 0.907 0.746 0.561 1e-93
356515904421 PREDICTED: aspartic proteinase Asp1-like 0.928 0.738 0.530 2e-92
>gi|15219354|ref|NP_175079.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|12320825|gb|AAG50556.1|AC074228_11 nucellin, putative [Arabidopsis thaliana] gi|332193902|gb|AEE32023.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/318 (56%), Positives = 230/318 (72%), Gaps = 6/318 (1%)

Query: 11  FPIFSYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCS 70
           FP+  Y++V + +G PPK F FD DTGSDLTWVQCDAPC+GCT PP  QYKP  NI+PCS
Sbjct: 44  FPL-GYYSVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGCTLPPNLQYKPKGNIIPCS 102

Query: 71  NPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFG 130
           NP C ALHWPN P C +P +QCDYE++Y D GSS+GALVTD FPL+  NGS    P+ FG
Sbjct: 103 NPICTALHWPNKPHCPNPQEQCDYEVKYADQGSSMGALVTDQFPLKLVNGSFMQPPVAFG 162

Query: 131 CGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDG 190
           CGY+Q  P    PP TAGVLGLGRG+I +++QL   GL RNV+GHC+   G G LF GD 
Sbjct: 163 CGYDQSYPSAHPPPATAGVLGLGRGKIGLLTQLVSAGLTRNVVGHCLSSKGGGFLFFGDN 222

Query: 191 KVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQ 250
            VPS GVAWTP+L       HY  GPA+LL++GK  GLK L LIFD+G+SY YF S+ YQ
Sbjct: 223 LVPSIGVAWTPLLSQD---NHYTTGPADLLFNGKPTGLKGLKLIFDTGSSYTYFNSKAYQ 279

Query: 251 EIVSLIMRDLIGTPLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSFTNRRNSVRL 308
            I++LI  DL  +PLK+A +DKTLPICW+G  PFK++ +V  +FK + ++FTN R + +L
Sbjct: 280 TIINLIGNDLKVSPLKVAKEDKTLPICWKGAKPFKSVLEVKNFFKTITINFTNGRRNTQL 339

Query: 309 VVPPEAYLVISVSTSIII 326
            + PE YL++S + ++ +
Sbjct: 340 YLAPELYLIVSKTGNVCL 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297841447|ref|XP_002888605.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] gi|297334446|gb|EFH64864.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255558640|ref|XP_002520345.1| nucellin, putative [Ricinus communis] gi|223540564|gb|EEF42131.1| nucellin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224082314|ref|XP_002306645.1| predicted protein [Populus trichocarpa] gi|222856094|gb|EEE93641.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|30699261|ref|NP_850981.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|17065172|gb|AAL32740.1| nucellin-like protein [Arabidopsis thaliana] gi|24899795|gb|AAN65112.1| nucellin-like protein [Arabidopsis thaliana] gi|332197863|gb|AEE35984.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30699263|ref|NP_177872.3| aspartyl protease-like protein [Arabidopsis thaliana] gi|332197862|gb|AEE35983.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297842525|ref|XP_002889144.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] gi|297334985|gb|EFH65403.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356554625|ref|XP_003545645.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|356509401|ref|XP_003523438.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|356515904|ref|XP_003526637.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query335
TAIR|locus:2205861405 AT1G44130 [Arabidopsis thalian 0.883 0.730 0.591 1.5e-99
TAIR|locus:2204725466 AT1G77480 [Arabidopsis thalian 0.886 0.637 0.56 6.1e-94
TAIR|locus:2028466583 AT1G49050 [Arabidopsis thalian 0.874 0.502 0.386 1.1e-53
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.811 0.552 0.289 5.3e-25
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.820 0.435 0.294 1.6e-24
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.605 0.454 0.340 2e-23
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.823 0.559 0.278 2.5e-23
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.820 0.570 0.307 2.9e-23
TAIR|locus:2200365475 AT1G65240 [Arabidopsis thalian 0.820 0.578 0.297 3.5e-23
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.474 0.297 0.367 3.7e-23
TAIR|locus:2205861 AT1G44130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
 Identities = 178/301 (59%), Positives = 220/301 (73%)

Query:    18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAAL 77
             +V + +G PPK F FD DTGSDLTWVQCDAPC+GCT PP  QYKP  NI+PCSNP C AL
Sbjct:    50 SVLMQIGSPPKAFQFDIDTGSDLTWVQCDAPCSGCTLPPNLQYKPKGNIIPCSNPICTAL 109

Query:    78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN 137
             HWPN P C +P +QCDYE++Y D GSS+GALVTD FPL+  NGS    P+ FGCGY+Q  
Sbjct:   110 HWPNKPHCPNPQEQCDYEVKYADQGSSMGALVTDQFPLKLVNGSFMQPPVAFGCGYDQSY 169

Query:   138 PGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGV 197
             P    PP TAGVLGLGRG+I +++QL   GL RNV+GHC+   G G LF GD  VPS GV
Sbjct:   170 PSAHPPPATAGVLGLGRGKIGLLTQLVSAGLTRNVVGHCLSSKGGGFLFFGDNLVPSIGV 229

Query:   198 AWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIM 257
             AWTP+L  S D  HY  GPA+LL++GK  GLK L LIFD+G+SY YF S+ YQ I++LI 
Sbjct:   230 AWTPLL--SQD-NHYTTGPADLLFNGKPTGLKGLKLIFDTGSSYTYFNSKAYQTIINLIG 286

Query:   258 RDLIGTPLKLAPDDKTLPICWRG--PFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 315
              DL  +PLK+A +DKTLPICW+G  PFK++ +V  +FK + ++FTN R + +L + PE Y
Sbjct:   287 NDLKVSPLKVAKEDKTLPICWKGAKPFKSVLEVKNFFKTITINFTNGRRNTQLYLAPELY 346

Query:   316 L 316
             L
Sbjct:   347 L 347
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2204725 AT1G77480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028466 AT1G49050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT1G44130
nucellin protein, putative; nucellin protein, putative; FUNCTIONS IN- aspartic-type endopeptidase activity; INVOLVED IN- proteolysis; LOCATED IN- plant-type cell wall; EXPRESSED IN- stem, embryo, pedicel, stamen; EXPRESSED DURING- 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461), Peptidase aspartic, active site (InterPro-IPR001969); BEST Arabidopsis thaliana protein match is- nucellin protein, putative (TAIR-AT1G77480.2); Has 1109 Blast hits to 1105 [...] (405 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G42360
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (236 aa)
   •    0.524
AT1G01680
U-box domain-containing protein; U-box domain-containing protein; FUNCTIONS IN- ubiquitin-prote [...] (308 aa)
   •    0.508
ACA13
calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13); [...] (1017 aa)
   •    0.505
YLS9
YLS9 (YELLOW-LEAF-SPECIFIC GENE 9); Encodes a protein whose sequence is similar to tobacco hair [...] (227 aa)
   •    0.500
AT3G47480
calcium-binding EF hand family protein; calcium-binding EF hand family protein; FUNCTIONS IN- c [...] (183 aa)
   •    0.499
AT5G02780
In2-1 protein, putative; In2-1 protein, putative; FUNCTIONS IN- molecular_function unknown; INV [...] (237 aa)
   •    0.489
anac042
anac042 (Arabidopsis NAC domain containing protein 42); transcription factor; Arabidopsis NAC d [...] (275 aa)
   •    0.481
AT1G08050
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (641 aa)
   •    0.481
AtRLP7
AtRLP7 (Receptor Like Protein 7); kinase/ protein binding; Receptor Like Protein 7 (AtRLP7); FU [...] (1019 aa)
   •    0.480
ATGSTU11
ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11); glutathione transferase; Encodes glutathione trans [...] (234 aa)
   •    0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query335
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-99
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-35
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-33
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-25
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-23
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 4e-14
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-09
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 7e-09
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 7e-05
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-04
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 0.003
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information 
 Score =  294 bits (754), Expect = 1e-99
 Identities = 130/304 (42%), Positives = 159/304 (52%), Gaps = 81/304 (26%)

Query: 16  YFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCA 75
           Y+ V + +G PPK +  D DTGSDLTW+QCDAPCTGC                       
Sbjct: 2   YYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC----------------------- 38

Query: 76  ALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQ 135
                          QCDYEIEY DGGSS+G LVTD+F L+ +NGS     + FGCGY+Q
Sbjct: 39  ---------------QCDYEIEYADGGSSMGVLVTDIFSLKLTNGSRAKPRIAFGCGYDQ 83

Query: 136 HNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSS 195
             P    PP T G+LGLGRG+IS+ SQL   G+I+NVIGHC+  NG G LF GD  VPSS
Sbjct: 84  QGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSNGGGFLFFGDDLVPSS 143

Query: 196 GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSL 255
           GV WTPM + S   KHY  GPA LL++G+  G K L ++FDSG+SY YF ++        
Sbjct: 144 GVTWTPMRRESQK-KHYSPGPASLLFNGQPTGGKGLEVVFDSGSSYTYFNAQA------- 195

Query: 256 IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY 315
                                              YFKPL L F     +  L +PPE Y
Sbjct: 196 -----------------------------------YFKPLTLKFGKGWRTRLLEIPPENY 220

Query: 316 LVIS 319
           L+IS
Sbjct: 221 LIIS 224

Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 335
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.89
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.72
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.97
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.04
PF1365090 Asp_protease_2: Aspartyl protease 96.41
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.46
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 92.65
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 88.47
PF1365090 Asp_protease_2: Aspartyl protease 86.45
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.13
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 84.6
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 84.24
COG3577215 Predicted aspartyl protease [General function pred 82.0
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 81.87
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 81.09
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-50  Score=386.70  Aligned_cols=295  Identities=27%  Similarity=0.510  Sum_probs=240.8

Q ss_pred             ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCC----cccCCcccccCCCCCCCCCCCCCCC
Q 019819           15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN----IVPCSNPRCAALHWPNPPRCKHPND   90 (335)
Q Consensus        15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S----~~~c~~~~C~~~~~~~~~~~~~~~~   90 (335)
                      ..|+++|.||||||++.|++||||+++||+|. +|..|..+.++.|||++|    .++|.++.|..++.  ...|... +
T Consensus        83 ~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~~-~  158 (431)
T PLN03146         83 GEYLMNISIGTPPVPILAIADTGSDLIWTQCK-PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSDE-N  158 (431)
T ss_pred             ccEEEEEEcCCCCceEEEEECCCCCcceEcCC-CCcccccCCCCcccCCCCCCCcccCCCCcccccCCC--CCCCCCC-C
Confidence            68999999999999999999999999999999 999999888999999998    39999999987653  2346553 5


Q ss_pred             CceeEEEeCCCCeEEEEEEEEEEEeeecCC-cccccceEEeceeecCCCCCCCCCCCceEEeeCCCCCchHHHHhhcCcc
Q 019819           91 QCDYEIEYGDGGSSIGALVTDLFPLRFSNG-SVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI  169 (335)
Q Consensus        91 ~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g-~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~g~i  169 (335)
                      .|.|.+.|++|+.+.|.+++|+|+|+...+ ...++++.|||++...+.+.   ...+||||||++..|+++||..+  +
T Consensus       159 ~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~---~~~~GilGLG~~~~Sl~sql~~~--~  233 (431)
T PLN03146        159 TCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFD---EKGSGIVGLGGGPLSLISQLGSS--I  233 (431)
T ss_pred             CCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCcc---CCCceeEecCCCCccHHHHhhHh--h
Confidence            799999999998889999999999964322 23578999999998765442   35899999999999999999764  5


Q ss_pred             cceeeeeecc-----CCceeEEeCCCCCCC-CCceeeeceeCCCCCCceEEEeeEEEecCEEeecCC--------CcEEE
Q 019819          170 RNVIGHCIGQ-----NGRGVLFLGDGKVPS-SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD--------LTLIF  235 (335)
Q Consensus       170 ~~~Fs~~l~~-----~~~g~l~fG~~~~~~-~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~--------~~~ii  235 (335)
                      .++||+||.+     ...|.|+||+..+.. ..+.|+|++.+.. ..+|.|.|++|.||++.+.++.        ..+||
T Consensus       234 ~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~ii  312 (431)
T PLN03146        234 GGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIII  312 (431)
T ss_pred             CCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEEEEECCEECcCCccccccCCCCcEEE
Confidence            5699999962     247999999864443 4589999986432 4789999999999999886533        47999


Q ss_pred             ecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCCCeE
Q 019819          236 DSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAY  315 (335)
Q Consensus       236 DtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~y  315 (335)
                      ||||++++||+++|++|.+++.+.+......  .....++.||...  .  .  ..+|+|+|+|+|    ++++|++++|
T Consensus       313 DSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~--~~~~~~~~C~~~~--~--~--~~~P~i~~~F~G----a~~~l~~~~~  380 (431)
T PLN03146        313 DSGTTLTLLPSDFYSELESAVEEAIGGERVS--DPQGLLSLCYSST--S--D--IKLPIITAHFTG----ADVKLQPLNT  380 (431)
T ss_pred             eCCccceecCHHHHHHHHHHHHHHhccccCC--CCCCCCCccccCC--C--C--CCCCeEEEEECC----CeeecCccee
Confidence            9999999999999999999999988632211  1223467899742  1  1  258999999987    8999999999


Q ss_pred             EEEEeCCCEEEEEEecC
Q 019819          316 LVISVSTSIIIIAYLTG  332 (335)
Q Consensus       316 ~~~~~~~~~~cl~~~~g  332 (335)
                      ++...+ +..|++++++
T Consensus       381 ~~~~~~-~~~Cl~~~~~  396 (431)
T PLN03146        381 FVKVSE-DLVCFAMIPT  396 (431)
T ss_pred             EEEcCC-CcEEEEEecC
Confidence            997654 5789999865

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query335
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 9e-05
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 3e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 4e-04
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 6e-04
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure 
Iteration: 1

 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 34  FDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC-AALHWPNP----PRC--- 85
            D    L W  CD       +PP +        +PCS+P C  A  +P P    P C   
Sbjct: 28  LDVAGPLVWSTCDG-----GQPPAE--------IPCSSPTCLLANAYPAPGCPAPSCGSD 74
Query: 86  KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNG----SVFNVPLTFGCGYNQHNPGPL 141
           KH      Y      G  + G+L    F    ++G    S  NV +   C  ++      
Sbjct: 75  KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS-- 132
Query: 142 SPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVP----SSGV 197
            P  + GV GL    +++ +Q+     + N    C+   G GV   G G VP    +  +
Sbjct: 133 LPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSM 192
Query: 198 AWTPMLQNSADLKHYI 213
            +TP++       HYI
Sbjct: 193 PYTPLVTKGGSPAHYI 208
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query335
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 3e-49
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 4e-47
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 6e-47
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 3e-11
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 5e-11
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 5e-11
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-09
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-09
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 7e-09
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 2e-08
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 4e-08
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 4e-07
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 4e-07
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-07
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 8e-07
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 2e-06
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 2e-06
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-06
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 2e-06
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-06
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 3e-06
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-06
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 5e-06
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 5e-06
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 7e-06
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 8e-06
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-05
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 1e-04
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-04
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-04
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 4e-04
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 6e-04
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  168 bits (427), Expect = 3e-49
 Identities = 49/340 (14%), Positives = 95/340 (27%), Gaps = 42/340 (12%)

Query: 15  SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 74
             +   +    P    +   D G    WV CD      T  P +            +  C
Sbjct: 20  LQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQC--SLSGSIAC 77

Query: 75  AALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLT-----F 129
                   P C + N    +        ++ G +  D+  +  ++GS     +T     F
Sbjct: 78  GDCFNGPRPGC-NNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIF 136

Query: 130 GCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIG--QNGRGVLFL 187
            C     +          G+ GLGR RI++ SQ       +     C+    +   V+  
Sbjct: 137 SCAPT--SLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIF 194

Query: 188 GDGK--------VPSSGVAWTPMLQNSADLK----------HYILGPAELLYSGKSCGLK 229
           G+          V    + +TP+L N                Y +G   +  + K   L 
Sbjct: 195 GNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALN 254

Query: 230 DLTL----------IFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWR 279
              L             +   Y    + +Y+ +    +++     +           C+ 
Sbjct: 255 TSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFS 314

Query: 280 GPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVIS 319
                  ++      + L    +  SV   +     +V  
Sbjct: 315 TDNILSTRLGPSVPSIDLVL--QSESVVWTITGSNSMVYI 352
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query335
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.95
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.84
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 96.57
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 84.76
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 80.24
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=8.1e-53  Score=399.85  Aligned_cols=311  Identities=17%  Similarity=0.312  Sum_probs=246.1

Q ss_pred             cceeEEeee-----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819            6 IEFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP   80 (335)
Q Consensus         6 ~~~~~~Pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~   80 (335)
                      .+++.+||+     .+|+++|.||||||++.|+|||||+++||+|. +|.     ....|.    .+.|.+..|...+..
T Consensus         6 ~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~~~   75 (413)
T 3vla_A            6 PSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSGSI   75 (413)
T ss_dssp             CSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTTCC
T ss_pred             CccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCcccccccccC
Confidence            478999999     78999999999999999999999999999988 661     122233    389999999876542


Q ss_pred             C--------CCCCCCCCCCceeEEEe-CCCCeEEEEEEEEEEEeeecCCc-----ccccceEEeceeecCCCCCCCCCCC
Q 019819           81 N--------PPRCKHPNDQCDYEIEY-GDGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPPDT  146 (335)
Q Consensus        81 ~--------~~~~~~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~~~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~  146 (335)
                      .        .+.|..  +.|.|.+.| ++++.+.|.+++|+|+|+..+|.     ..++++.|||+..+......  ...
T Consensus        76 ~~~~c~s~~~~~c~~--~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~~~  151 (413)
T 3vla_A           76 ACGDCFNGPRPGCNN--NTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA--SGV  151 (413)
T ss_dssp             EEECCSSCCBTTBCS--SEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC--TTC
T ss_pred             CCcccccCCCCCCCC--CcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc--ccc
Confidence            1        123433  579999999 58879999999999999865553     46789999999986321112  578


Q ss_pred             ceEEeeCCCCCchHHHHhhcCcccceeeeeecc--CCceeEEeCCCCC-------CCCC-ceeeeceeCCCC--------
Q 019819          147 AGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGKV-------PSSG-VAWTPMLQNSAD--------  208 (335)
Q Consensus       147 ~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~--~~~g~l~fG~~~~-------~~~~-~~~~p~~~~~~~--------  208 (335)
                      |||||||++.+|++.||.++++++++||+||.+  ..+|.|+||+.+.       ..++ ++|+|+..++..        
T Consensus       152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~  231 (413)
T 3vla_A          152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG  231 (413)
T ss_dssp             CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred             ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence            999999999999999999998889999999985  4689999999753       2466 999999987432        


Q ss_pred             --CCceEEEeeEEEecCEEeecC----------CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCc
Q 019819          209 --LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPI  276 (335)
Q Consensus       209 --~~~~~v~l~~i~v~~~~~~~~----------~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~  276 (335)
                        ..+|.|.|++|.|+++.+.++          ...+||||||++++||+++|++|.++|.+.+...+++++.....++.
T Consensus       232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~  311 (413)
T 3vla_A          232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGA  311 (413)
T ss_dssp             CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSC
T ss_pred             CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcc
Confidence              279999999999999998764          36899999999999999999999999999875222444333345678


Q ss_pred             cccCCcccccccccccccEEEEEcCCCCceEEEeCCCeEEEEEeCCCEEEEEEecCC
Q 019819          277 CWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGK  333 (335)
Q Consensus       277 C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~~~~~cl~~~~g~  333 (335)
                      ||..+.....++...+|+|+|+|+|+  +++|+|++++|+++..+ +..|++|+++.
T Consensus       312 C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~-~~~Cl~~~~~~  365 (413)
T 3vla_A          312 CFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYIND-NVVCLGVVDGG  365 (413)
T ss_dssp             EEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEET-TEEEECEEEEE
T ss_pred             eeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCC-CcEEEEEEecC
Confidence            99864322112224689999999873  38999999999998654 57899998753
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 335
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 5e-30
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-18
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 3e-17
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 8e-17
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-16
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 4e-16
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 5e-16
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 6e-16
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 8e-15
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 8e-15
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 6e-14
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-14
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 8e-14
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-13
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-13
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 7e-13
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-12
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 9e-12
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-11
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 5e-11
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-09
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 5e-09
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  115 bits (288), Expect = 5e-30
 Identities = 53/329 (16%), Positives = 92/329 (27%), Gaps = 45/329 (13%)

Query: 15  SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 74
           S + +    G          D    L W  CD                    +PCS+P C
Sbjct: 14  SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAE-------------IPCSSPTC 55

Query: 75  AALHWPNPPRCKHP--------NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP 126
              +    P C  P             Y      G  + G+L    F    ++GS     
Sbjct: 56  LLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 127 LTFGCGYN--QHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGV 184
           +  G              P  + GV GL    +++ +Q+     + N    C+   G GV
Sbjct: 116 VNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGV 175

Query: 185 LFLGDGKVP----SSGVAWTPMLQNSADLKHYI----LGPAELLYSGKSCGLKDLTLIFD 236
              G G VP    +  + +TP++       HYI    +   +         L    ++  
Sbjct: 176 AIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLS 235

Query: 237 SGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKT------LPICWRGPFKALGQVTE 290
           +   Y      VY+ ++    + L       AP  +         +C+            
Sbjct: 236 TRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGY 295

Query: 291 YFKPLALSFTNRRNSVRLVVPPEAYLVIS 319
               + L            +  +  +V  
Sbjct: 296 AVPNVQLGL---DGGSDWTMTGKNSMVDV 321
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query335
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=2.8e-44  Score=329.43  Aligned_cols=272  Identities=22%  Similarity=0.367  Sum_probs=222.2

Q ss_pred             eEEeee-----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCC
Q 019819            9 FFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP   83 (335)
Q Consensus         9 ~~~Pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~   83 (335)
                      ..+||+     ..|+++|.||||+|++.|+|||||+++||+|+ +|..|..+ ++.|+|++|+                 
T Consensus         4 ~~vpl~~~~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~-~C~~c~~~-~~~y~~~~Ss-----------------   64 (325)
T d2apra_           4 GTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNCGSG-QTKYDPNQSS-----------------   64 (325)
T ss_dssp             TEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSCCTT-SCCBCGGGCT-----------------
T ss_pred             eEEEeEecCCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCC-CCCccccC-CCccCcccCC-----------------
Confidence            467887     46999999999999999999999999999999 99999754 4679998883                 


Q ss_pred             CCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCC-------C
Q 019819           84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRG-------R  156 (335)
Q Consensus        84 ~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~-------~  156 (335)
                      ++..  ..|.|.+.|++|+.+.|.+++|++++    |+..+.++.|+++.........  ...+||+|||+.       .
T Consensus        65 T~~~--~~~~~~~~y~~g~~~~G~~~~D~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~GilGlg~~~~~~~~~~  136 (325)
T d2apra_          65 TYQA--DGRTWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFAS--GPNDGLLGLGFDTITTVRGV  136 (325)
T ss_dssp             TCEE--EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT--SSCSEEEECSCGGGCSSTTC
T ss_pred             ceeE--CCeEEEEEeCCCCeEEEEEEeeeEEe----eeeeccCcceeeeeeecccccc--cccCcccccccccccccccC
Confidence            2222  47899999999988999999999999    5667889999999876443221  568999999974       3


Q ss_pred             CchHHHHhhcCcc-cceeeeeecc---CCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCC
Q 019819          157 ISIVSQLREYGLI-RNVIGHCIGQ---NGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD  230 (335)
Q Consensus       157 ~s~~~ql~~~g~i-~~~Fs~~l~~---~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~  230 (335)
                      .+++.++.++++| +++||+||.+   ...|.|+||+++  +..+++.|+|+...   ..+|.|.++++.+++..+. .+
T Consensus       137 ~~~~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~---~~~~~v~l~~i~i~~~~~~-~~  212 (325)
T d2apra_         137 KTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGTSTVA-SS  212 (325)
T ss_dssp             CCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETTEEEE-CC
T ss_pred             CcchhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecCC---CceEEEEEeeEEECCEeec-ce
Confidence            5789999999999 8999999963   456999999975  45789999998765   4789999999999999876 35


Q ss_pred             CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEe
Q 019819          231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV  310 (335)
Q Consensus       231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l  310 (335)
                      ..++|||||++++||.+++++|.+++.+.....       .....+|..          ..+|+|+|+|+|    ++++|
T Consensus       213 ~~~iiDSGt~~~~lp~~~~~~l~~~~~~~~~~~-------~~~~~~C~~----------~~~p~i~f~f~g----~~~~i  271 (325)
T d2apra_         213 FDGILDTGTTLLILPNNIAASVARAYGASDNGD-------GTYTISCDT----------SAFKPLVFSING----ASFQV  271 (325)
T ss_dssp             EEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-------SCEEECSCG----------GGCCCEEEEETT----EEEEE
T ss_pred             eeeeccCCCccccCCHHHHHHHHHHhCCcccCC-------CceeecccC----------CCCCcEEEEECC----EEEEE
Confidence            789999999999999999999999986543211       111123432          247999999987    99999


Q ss_pred             CCCeEEEEEeCCCEEEEEEecCC
Q 019819          311 PPEAYLVISVSTSIIIIAYLTGK  333 (335)
Q Consensus       311 ~~~~y~~~~~~~~~~cl~~~~g~  333 (335)
                      +|++|+++..+ +.||++|+.+.
T Consensus       272 ~~~~y~~~~~~-~~C~~~i~~~~  293 (325)
T d2apra_         272 SPDSLVFEEFQ-GQCIAGFGYGN  293 (325)
T ss_dssp             CGGGGEEEEET-TEEEESEEEES
T ss_pred             ChHHeEEecCC-CEEEEEEccCC
Confidence            99999998654 58999987654
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure