Citrus Sinensis ID: 019845

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHcccccccccc
Coil and Loop (DISEMBL)
MQWYFVATLLTILTSSQGILTTlsqsnggykydyatVPFLAEVFKLVVSSILLWrewrmpsspkmttewrsvrlfpipsIIYLVHNNVQFATltyvdtstyqimGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGtttsqvkgcgeALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDfrggfekgpwwqrlfdgyniTTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSlhmyfappgmlvdipstakaapdslrEVSVERRTDS
Flexible Loop (DISEMBL)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWrewrmpsspkmttewRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTakaapdslrevsverrtds
Low Complexity Region (SEG)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIlfrlflrrrlSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Disordered region (IsUnstruct)
**WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDI**********************
Disordered Region (DISOPRED)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ*************AAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF*******************************
Disordered Region (DISEMBL)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPST*******************
Disordered Region (DISPRO)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG******LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP****************************
Transmembrane Helix (TMHMM)
iiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q8LGE9	340	CMP-sialic acid transport	yes	no	0.994	0.979	0.802	1e-157
F4JN00	352	CMP-sialic acid transport	no	no	0.868	0.826	0.401	3e-56
Q9C5H6	405	CMP-sialic acid transport	no	no	0.868	0.718	0.282	2e-35
Q8GY97	406	CMP-sialic acid transport	no	no	0.862	0.711	0.294	2e-35
A4IHW3	321	Probable UDP-sugar transp	yes	no	0.868	0.906	0.293	5e-32
Q9R0M8	390	UDP-galactose translocato	yes	no	0.689	0.592	0.334	2e-30
Q61420	336	CMP-sialic acid transport	no	no	0.934	0.931	0.292	1e-29
O77592	326	UDP-N-acetylglucosamine t	yes	no	0.814	0.837	0.310	1e-29
Q6YC49	326	UDP-N-acetylglucosamine t	yes	no	0.814	0.837	0.310	2e-29
Q9Y2D2	325	UDP-N-acetylglucosamine t	yes	no	0.814	0.84	0.307	3e-29

>sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1

 Score =  555 bits (1430), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/335 (80%), Positives = 302/335 (90%), Gaps = 2/335 (0%)

Query: 3   WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS 62
           WYFVA LLTILTSSQGILTTLSQS+GGYKYDYATVPFLAEVFKL++S + LWRE R  SS
Sbjct: 6   WYFVAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSS 65

Query: 63  PKMTT--EWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
                  +W+SVRLF IPS+IYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 66  TTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 125

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           +R+LS LQWMAI LLAVGTTTSQVKGCGEA CDSLF APIQGYLLG+LSA LSALAG+YT
Sbjct: 126 KRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYT 185

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMK+NND+LYWQN+QLYTFG++FN+ RL+ DDFR GFEKGPWWQR+FDGY+ITTW+VV
Sbjct: 186 EFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMV S+YLF+FKPTLQLFLGI+IC+MSL
Sbjct: 246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPP  LVD+P T +A   +L++V VE +TDS
Sbjct: 306 HMYFAPPHTLVDLPVTNEAHAKTLKQVVVEEKTDS 340

Essential protein. Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
Arabidopsis thaliana (taxid: 3702)

>sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1

 Score =  219 bits (557), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 13/304 (4%)

Query: 6   VATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWR---MPSS 62
           V   LTILTSSQ IL   S+  G Y+Y   T  FL    K  +S + L R W+   +   
Sbjct: 54  VTCALTILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDD 113

Query: 63  PKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRR 122
            +++T +  V++FPIP+ +YL  N +Q+    YVD   YQI+ NL I++TG+L+R+ L+R
Sbjct: 114 NRLSTTFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKR 173

Query: 123 RLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF 182
           +LS +QW   +LL  G TT+Q+        D +    + G+ + ++ A LS  AGVYTE 
Sbjct: 174 KLSEIQWAGFILLCCGCTTAQLNSNS----DRVLQTSLPGWTMAIVMALLSGFAGVYTEA 229

Query: 183 LMKKN-NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241
           ++KK  + ++  QN  LY FG  FN   +++ DF     KG      F GY+  T +++ 
Sbjct: 230 IIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKG-----FFHGYSFITLLMIL 284

Query: 242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH 301
           N   +G+ VS +MKYADNI+KVYSTS+AMLLT V+SV+LFNF  +L  FLG  +  +S++
Sbjct: 285 NHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVY 344

Query: 302 MYFA 305
           ++ A
Sbjct: 345 LHSA 348

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi (By similarity). Essential protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana GN=UTR6 PE=2 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 163/304 (53%), Gaps = 13/304 (4%)

Query: 12  ILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLW---REWRMPSSPKMTTE 68
           +L   Q +L  +S+ +G + +   +V FL E+ K++ + ++L    R  ++   P ++  
Sbjct: 51  MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVS 110

Query: 69  -----WRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRR 123
                 R+  L  +P+++Y ++N ++F    Y + +T +++ NLK++   +L ++ ++RR
Sbjct: 111 TFVQAARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRR 170

Query: 124 LSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL 183
            S +QW A+ LL +G + +Q++   E             Y+  V+   + ++A V+ E+ 
Sbjct: 171 FSIIQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYA 230

Query: 184 MKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 242
           +K   D S+Y QN+ LY +GAIFN   +L         KGP    +  G++  T  ++ N
Sbjct: 231 LKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHSRATMFLILN 286

Query: 243 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 302
             + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S+H 
Sbjct: 287 NAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQ 346

Query: 303 YFAP 306
           +F+P
Sbjct: 347 FFSP 350

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 165/306 (53%), Gaps = 17/306 (5%)

Query: 12  ILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLW---REWRMPSSPKMT-- 66
           +L   Q +L  +S+ +G + +   +V FL E+ K++ + ++L    R  ++   P ++  
Sbjct: 53  MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLS 112

Query: 67  ---TEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRR 123
                 R+  L  +P+ +Y ++N ++F    Y + +T +++ NLK++   +L ++ ++RR
Sbjct: 113 TFVQAARNNMLLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRR 172

Query: 124 LSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ--GYLLGVLSACLSALAGVYTE 181
            S +QW A+ LL +G + +Q++   E    +  A PI    Y+   +   + +LA VY E
Sbjct: 173 FSIIQWEALALLLIGISINQLRSLPEG--ATTVAVPIATGAYICTFIFVTVPSLASVYNE 230

Query: 182 FLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           + +K   D S+Y QN+ LY +GAIFN   +L         KGP    +  G++  T  ++
Sbjct: 231 YALKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHSRATMFLI 286

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            N  + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S+
Sbjct: 287 LNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISM 346

Query: 301 HMYFAP 306
           H +F+P
Sbjct: 347 HQFFSP 352

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|A4IHW3|S35A4_XENTR Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1

 Score =  138 bits (348), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 161/307 (52%), Gaps = 16/307 (5%)

Query: 3   WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSIL-LWREWRMPS 61
           W  +  L   +  S   L  L + NG   +  + V  L E+ K V+S +  L ++W+   
Sbjct: 25  WGLMLVLSVTIYGSHAPLIYLCKVNGEIPFSSSAVVLLIELSKFVISLVFFLIQDWK--- 81

Query: 62  SPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLR 121
           S K +  W     + +P+++Y  +NN+      ++D S++Q++ NLKIV+T +L+ LFLR
Sbjct: 82  SLKASVSWHLAAPYAVPAVLYGANNNLVVYIQHFMDPSSFQVLSNLKIVSTAVLYSLFLR 141

Query: 122 RRLSTLQWMAI-VLLAVGTTTSQ--VKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV 178
           +RLS  +W+++ +LLA G   S   ++   +   D+     + G LL +    +S L+ V
Sbjct: 142 QRLSVRRWLSVFLLLAAGVFYSYGGIQDLEKVSSDTNLYVTLPGLLLMLAYCLISGLSAV 201

Query: 179 YTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM 238
           YTE  +K     L  QN+ LY+FG I N+   L       F         FDG+++  W+
Sbjct: 202 YTEMTLKTQKIPLNMQNLYLYSFGIIINLTAHLTSSKNSDF---------FDGFSVWVWV 252

Query: 239 VVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMM 298
           ++ +    GL++S +MK ++NI +++  S +ML    LS  LF  + T   FL +++  +
Sbjct: 253 IILSQALNGLIMSLVMKLSNNITRLFIISFSMLANGFLSFILFQLQLTALFFLAVVLIGL 312

Query: 299 SLHMYFA 305
           +++MY+ 
Sbjct: 313 AVYMYYG 319

Xenopus tropicalis (taxid: 8364)

>sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=2 SV=1

 Score =  133 bits (334), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 23/254 (9%)

Query: 77  IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLA 136
           +PS+IY + NN+Q+  ++ +  +T+Q+   LKI+TT +   L L R LS LQW +++LL 
Sbjct: 117 VPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLF 176

Query: 137 VGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQN 195
            G    Q +  G +    L   P  G L  V+++CLS+  AGVY E ++K ++ S++ +N
Sbjct: 177 TGVAIVQAQQAGGSGPRPLDQNPGAG-LAAVVASCLSSGFAGVYFEKILKGSSGSVWLRN 235

Query: 196 VQLYTFGAIFNMFRLLLDDFRGGFEKGPWW--------QRLFDGYNITTWMVVFNLGSTG 247
           +QL  FG    +              G WW        Q  F GY    W VV N    G
Sbjct: 236 LQLGLFGTALGLV-------------GLWWAEGTAVASQGFFFGYTPAVWGVVLNQAFGG 282

Query: 248 LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307
           LLV+ ++KYADNI+K ++TS++++L+ V S+ LF F       LG  + + ++++Y  P 
Sbjct: 283 LLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHLDPLFALGAGLVIGAVYLYSLPR 342

Query: 308 GMLVDIPSTAKAAP 321
           G +  I S + + P
Sbjct: 343 GAVKAIASASASGP 356

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Mus musculus (taxid: 10090)

>sp|Q61420|S35A1_MOUSE CMP-sialic acid transporter OS=Mus musculus GN=Slc35a1 PE=1 SV=2

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 163/328 (49%), Gaps = 15/328 (4%)

Query: 8   TLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWRE------WRMPS 61
           T++T++ ++  +    +++     Y   T   + EV KL++S  LL +E      ++   
Sbjct: 18  TVMTLVAAAYTVALRYTRTTAEELYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASL 77

Query: 62  SPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLR 121
           S  +    + +    +PS++Y V NN+ F  L+ +D + YQ+   LKI  T +   L L 
Sbjct: 78  SENVLGSPKELAKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLN 137

Query: 122 RRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTE 181
           R LS LQW+++ +L  G T  Q K   +A    +   P+ G+    ++   S  AGVY E
Sbjct: 138 RTLSKLQWISVFMLCGGVTLVQWKP-AQATKVVVAQNPLLGFGAIAIAVLCSGFAGVYFE 196

Query: 182 FLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241
            ++K ++ SL+ +N+Q+Y  G +  +    L D     EKG      F GY    W V+F
Sbjct: 197 KVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKG-----FFYGYTYYVWFVIF 251

Query: 242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH 301
                GL  S ++KY DNI+K +S + A++L+ + SV LF  + TL   LG ++  +S++
Sbjct: 252 LASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVLLFGLQITLSFALGALLVCVSIY 311

Query: 302 MYFAPPGMLVDIPSTAKAAPDSLREVSV 329
           +Y  P     D  S  + A    R + V
Sbjct: 312 LYGLPRQ---DTTSIQQEATSKERIIGV 336

Transport CMP-sialic acid from the cytosol into Golgi vesicles where glycosyltransferases function.

Mus musculus (taxid: 10090)

>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 160/290 (55%), Gaps = 17/290 (5%)

Query: 29  GYKYDYATVPFLAEVFKLVVSSILLWREW--------RMPSSPKMTTEWRSVRLFPIPSI 80
           G +Y  +T   +AE+ K++   +L++++         R+     +     +++L  IPS 
Sbjct: 34  GPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPMETLKL-AIPSG 92

Query: 81  IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140
           IY + NN+ +  L+ +D +TYQ+   LKI+TT +     L ++L   QW+++V+L  G  
Sbjct: 93  IYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVA 152

Query: 141 TSQVKGCGEALCDSLFAAPIQGY-LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 198
             Q     + L     +A  Q   L+ VL+AC S+  AGVY E ++K+   S++ +N+QL
Sbjct: 153 FVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 212

Query: 199 YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYAD 258
             FG+IF +  + + D     + G      F GYN  TW+VV      GL+++ ++KYAD
Sbjct: 213 GFFGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVILQALGGLVIAAVIKYAD 267

Query: 259 NIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 307
           NI+K ++TS++++L+ ++S + L +F PT   FLG I+ + +  +Y   P
Sbjct: 268 NILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 317

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Canis familiaris (taxid: 9615)

>sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1

 Score =  130 bits (326), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 160/290 (55%), Gaps = 17/290 (5%)

Query: 29  GYKYDYATVPFLAEVFKLVVSSILLWREW--------RMPSSPKMTTEWRSVRLFPIPSI 80
           G +Y  +T   +AE+ K++   +L++++         R+     +     +++L  IPS 
Sbjct: 34  GPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPMETLKL-AIPSG 92

Query: 81  IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140
           IY + NN+ +  L+ +D +TYQ+   LKI+TT +     L ++L   QW+++V+L  G  
Sbjct: 93  IYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVA 152

Query: 141 TSQVKGCGEALCDSLFAAPIQGY-LLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQL 198
             Q     + L     +A  Q   L+ VL+AC S+  AGVY E ++K+   S++ +N+QL
Sbjct: 153 FVQWPSDSQELNSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQL 212

Query: 199 YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYAD 258
             FG+IF +  + + D     + G      F GYN  TW+VV      GL+++ ++KYAD
Sbjct: 213 GFFGSIFGLMGVYVYDGELVSKNG-----FFQGYNRLTWIVVVLQALGGLVIAAVIKYAD 267

Query: 259 NIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 307
           NI+K ++TS++++L+ ++S + L +F PT   FLG I+ + +  +Y   P
Sbjct: 268 NILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 317

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Bos taurus (taxid: 9913)

>sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=2 SV=1

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 158/289 (54%), Gaps = 16/289 (5%)

Query: 29  GYKYDYATVPFLAEVFKLVVSSILLWREW--------RMPSSPKMTTEWRSVRLFPIPSI 80
           G +Y  +T   +AE+ K++   +L++++         R+     +     +++L  IPS 
Sbjct: 34  GPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPMETLKL-AIPSG 92

Query: 81  IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140
           IY + NN+ +  L+ +D +TYQ+   LKI+TT +     L ++L   QW+++V+L  G  
Sbjct: 93  IYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGVA 152

Query: 141 TSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA-LAGVYTEFLMKKNNDSLYWQNVQLY 199
             Q     +     L A      L+ VL+AC S+  AGVY E ++K+   S++ +N+QL 
Sbjct: 153 FVQWPSDSQLDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLG 212

Query: 200 TFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADN 259
            FG+IF +  + + D     + G      F GYN  TW+VV      GL+++ ++KYADN
Sbjct: 213 FFGSIFGLMGVYIYDGELVSKNG-----FFQGYNRLTWIVVVLQALGGLVIAAVIKYADN 267

Query: 260 IIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLFLGIIICMMSLHMYFAPP 307
           I+K ++TS++++L+ ++S + L +F PT   FLG I+ + +  +Y   P
Sbjct: 268 ILKGFATSLSIILSTLISYFWLQDFVPTSVFFLGAILVITATFLYGYDP 316

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
255583816	335	cmp-sialic acid transporter, putative [R	1.0	1.0	0.865	1e-171
225454456	331	PREDICTED: CMP-sialic acid transporter [	0.988	1.0	0.856	1e-170
356573211	335	PREDICTED: LOW QUALITY PROTEIN: probable	1.0	1.0	0.847	1e-167
449499467	337	PREDICTED: CMP-sialic acid transporter 1	1.0	0.994	0.839	1e-165
449446259	337	PREDICTED: CMP-sialic acid transporter 1	1.0	0.994	0.836	1e-164
356506046	335	PREDICTED: probable UDP-sugar transporte	1.0	1.0	0.826	1e-164
217072370	336	unknown [Medicago truncatula] gi|3885066	1.0	0.997	0.809	1e-161
357512521	409	UDP-galactose/UDP-N-acetylglucosamine tr	1.0	0.819	0.809	1e-161
147772007	392	hypothetical protein VITISV_039397 [Viti	0.937	0.801	0.852	1e-160
224053803	335	predicted protein [Populus trichocarpa]	1.0	1.0	0.844	1e-160

>gi|255583816|ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis] gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter, putative [Ricinus communis]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 290/335 (86%), Positives = 311/335 (92%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWY VA+ LTI TSSQGILTTLSQSNG YKYDYATVPFLAEVFKL+VSS LLWRE +  
Sbjct: 1   MQWYIVASFLTIFTSSQGILTTLSQSNGKYKYDYATVPFLAEVFKLIVSSFLLWRECKKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTT+W++VRLFPIPSIIYL+HNNVQFATL YVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PLPKMTTDWKTVRLFPIPSIIYLIHNNVQFATLIYVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           +++LS LQWMAI LLAVGTTTSQVKGCGEA CDSLF++PIQGY+LG+LSACLSALAGVYT
Sbjct: 121 KKKLSNLQWMAIALLAVGTTTSQVKGCGEASCDSLFSSPIQGYMLGILSACLSALAGVYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQN+QLYTFGAIFNM RLLLDDFRGGFEKGPWWQRLF GY ITTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNIQLYTFGAIFNMARLLLDDFRGGFEKGPWWQRLFSGYTITTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLG +GLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNF PTLQLFLGIIICMMSL
Sbjct: 241 LNLGCSGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFSPTLQLFLGIIICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPPGMLVD+PS  KA P+SL +VSVERRTDS
Sbjct: 301 HMYFAPPGMLVDLPSMGKADPESLIDVSVERRTDS 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454456|ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera] gi|297745398|emb|CBI40478.3| unnamed protein product [Vitis vinifera]

 Score =  603 bits (1554), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/335 (85%), Positives = 316/335 (94%), Gaps = 4/335 (1%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWYFVA+LLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKL+VSS+LLWRE +  
Sbjct: 1   MQWYFVASLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLLVSSVLLWRECKRS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             P+MTTEW+S+RLFPIPSIIYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PPPRMTTEWKSIRLFPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           RR+LS LQWMAIVLLA+GTTTSQV+GCGEA CDSLF+APIQGY+LG+LSACLSALAGVYT
Sbjct: 121 RRKLSNLQWMAIVLLAIGTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKN+DSLYWQNVQLYTFGAIFNM RL+LDD+R GFEKGPWW RLF+GY++TTWMVV
Sbjct: 181 EFLMKKNDDSLYWQNVQLYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMVLSV+LFNFKPTLQLFLGI+ICMMSL
Sbjct: 241 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPP MLVD+P T K+AP+S     ++RRT+S
Sbjct: 301 HMYFAPPTMLVDLPLTVKSAPES----HIDRRTNS 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573211|ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/335 (84%), Positives = 309/335 (92%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWYFVA+LLT+LTSSQGILTTLSQSNG YKYDYATVPFLAEVFKL VSS+LLWRE +  
Sbjct: 1   MQWYFVASLLTVLTSSQGILTTLSQSNGEYKYDYATVPFLAEVFKLAVSSLLLWRECKKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTTEW++V LFPIPS+IYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PLPKMTTEWKTVSLFPIPSVIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
            RRLS LQWMAIVLLAVGTTTSQV+GCGEA CDSLF+APIQGY+LGVLSACLSALAG+YT
Sbjct: 121 GRRLSNLQWMAIVLLAVGTTTSQVRGCGEASCDSLFSAPIQGYMLGVLSACLSALAGIYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQN+QLYTFG +FNM RLL DDFRGGFE GPWWQR+F+GY ITTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNIQLYTFGTLFNMARLLADDFRGGFENGPWWQRIFNGYTITTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM+LS++LFNFKPTLQLFLGIIICMMSL
Sbjct: 241 LNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILSLFLFNFKPTLQLFLGIIICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPP ML+D+P T K   + L EVSV+RRT S
Sbjct: 301 HMYFAPPNMLLDMPXTVKPDEEKLIEVSVDRRTLS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499467|ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/337 (83%), Positives = 307/337 (91%), Gaps = 2/337 (0%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWY VA LLT+LTSSQGILTTLSQSNG Y YDYATVPFLAEVFKL VSS+ LW+E +  
Sbjct: 1   MQWYIVALLLTVLTSSQGILTTLSQSNGRYDYDYATVPFLAEVFKLFVSSLFLWKESQKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTT+WR+VRL+PIPSIIYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           RR+LS LQWMAIVLLAVGTTTSQVKGCGEA C+SL +APIQGY+LG+LSACLSALAG+YT
Sbjct: 121 RRKLSNLQWMAIVLLAVGTTTSQVKGCGEASCESLLSAPIQGYMLGILSACLSALAGIYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQNVQLYTFGAIFNM RL+ DDFRGGFEKGPWWQRL +GY++TTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMARLVADDFRGGFEKGPWWQRLLNGYSVTTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLT +LSVYLFNFKPTLQLFLGII+CMMSL
Sbjct: 241 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTILSVYLFNFKPTLQLFLGIIVCMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPD--SLREVSVERRTDS 335
           HMYFAPP MLVD+P     + D  SL EVS +RRTDS
Sbjct: 301 HMYFAPPQMLVDLPPPVVKSQDLESLIEVSSDRRTDS 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446259|ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/337 (83%), Positives = 306/337 (90%), Gaps = 2/337 (0%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWY VA LLT+LTSSQGILTTLSQSNG Y YDYATVPFLAEVFKL VSS+ LW+E +  
Sbjct: 1   MQWYIVALLLTVLTSSQGILTTLSQSNGRYDYDYATVPFLAEVFKLFVSSLFLWKESQKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTT+WR+VRL+PIPSIIYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           RR+LS LQWMAIVLLAVGTTTSQVKGCGEA C+SL +APIQGY+LG+LSACLSALAG+YT
Sbjct: 121 RRKLSNLQWMAIVLLAVGTTTSQVKGCGEASCESLLSAPIQGYMLGILSACLSALAGIYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQNVQLYTFGAIFNM RL+ DDFRGGFEKGPWWQRL +GY++TTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMARLVADDFRGGFEKGPWWQRLLNGYSVTTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLT +LSVYLFNFKPTLQLFLGII+CMMSL
Sbjct: 241 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTILSVYLFNFKPTLQLFLGIIVCMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPD--SLREVSVERRTDS 335
           HMYFAPP MLVD+P     + D  SL EV  +RRTDS
Sbjct: 301 HMYFAPPQMLVDLPPPVVKSQDLESLIEVPSDRRTDS 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506046|ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/335 (82%), Positives = 305/335 (91%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWYFVA LLT+LTSSQGILTTLSQS G YKYDYATVPFLAE+FKL VSS+LLW+E +  
Sbjct: 1   MQWYFVAALLTVLTSSQGILTTLSQSKGEYKYDYATVPFLAEIFKLAVSSLLLWKECKKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTTEW++V LFPIPS+IYL+HNNVQFATLTYVDTSTYQI+GNLKIVTTGILFRLFL
Sbjct: 61  PLPKMTTEWKTVSLFPIPSVIYLIHNNVQFATLTYVDTSTYQILGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
            RRLS LQWMAIVLLAVGTTTSQV+GCGEA CDS+F+APIQGY+LGVLSACLSALAG+YT
Sbjct: 121 GRRLSNLQWMAIVLLAVGTTTSQVRGCGEASCDSIFSAPIQGYMLGVLSACLSALAGIYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQN+QLYTFG  FNM RLL DDFRGGFE GPWWQR+F+GY ITTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNIQLYTFGTFFNMARLLADDFRGGFENGPWWQRIFNGYTITTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM+LS++LFNFKPTLQLFLGIIICMMSL
Sbjct: 241 LNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILSLFLFNFKPTLQLFLGIIICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPP +L+D P T K   + L EVS++RRT S
Sbjct: 301 HMYFAPPNLLLDKPLTVKLDEEKLIEVSIDRRTLS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072370|gb|ACJ84545.1| unknown [Medicago truncatula] gi|388506604|gb|AFK41368.1| unknown [Medicago truncatula]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/336 (80%), Positives = 307/336 (91%), Gaps = 1/336 (0%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWY VATLLT+LTSSQGILTTLSQ+NG YKYDYATVPFLAEVFKL VSS+LLW+E +  
Sbjct: 1   MQWYLVATLLTVLTSSQGILTTLSQTNGSYKYDYATVPFLAEVFKLAVSSLLLWKECQKS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTTEW++V L+PIPS+IYL+HNNVQFATLT+VDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PLPKMTTEWKTVSLYPIPSVIYLIHNNVQFATLTFVDTSTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
            RRLS LQWMAIVLLAVGTTTSQVKGCGEA CDS+F+API GY+LGVLSACLSALAG+YT
Sbjct: 121 GRRLSNLQWMAIVLLAVGTTTSQVKGCGEASCDSIFSAPIPGYMLGVLSACLSALAGIYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQN+QLYTFG+IFN+ +L++DDFRGGFE GPWW R+F+GY +TTW+VV
Sbjct: 181 EFLMKKNNDSLYWQNIQLYTFGSIFNLAKLIVDDFRGGFENGPWWHRIFNGYTVTTWLVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM LS +LF+FKPTLQLFLGI+ICMMSL
Sbjct: 241 LNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMTLSTFLFDFKPTLQLFLGIVICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDS-LREVSVERRTDS 335
           HMYFAPP ML+D+P T K+  +  L EVSV+RRT S
Sbjct: 301 HMYFAPPNMLLDMPLTVKSGEEEKLIEVSVDRRTRS 336

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512521|ref|XP_003626549.1| UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 [Medicago truncatula] gi|355501564|gb|AES82767.1| UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 [Medicago truncatula]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/336 (80%), Positives = 307/336 (91%), Gaps = 1/336 (0%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWY VATLLT+LTSSQGILTTLSQ+NG YKYDYATVPFLAEVFKL VSS+LLW+E +  
Sbjct: 74  MQWYLVATLLTVLTSSQGILTTLSQTNGSYKYDYATVPFLAEVFKLAVSSLLLWKECQKS 133

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
             PKMTTEW++V L+PIPS+IYL+HNNVQFATLT+VDTSTYQIMGNLKIVTTGILFRLFL
Sbjct: 134 PLPKMTTEWKTVSLYPIPSVIYLIHNNVQFATLTFVDTSTYQIMGNLKIVTTGILFRLFL 193

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
            RRLS LQWMAIVLLAVGTTTSQVKGCGEA CDS+F+API GY+LGVLSACLSALAG+YT
Sbjct: 194 GRRLSNLQWMAIVLLAVGTTTSQVKGCGEASCDSIFSAPIPGYMLGVLSACLSALAGIYT 253

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQN+QLYTFG+IFN+ +L++DDFRGGFE GPWW R+F+GY +TTW+VV
Sbjct: 254 EFLMKKNNDSLYWQNIQLYTFGSIFNLAKLIVDDFRGGFENGPWWHRIFNGYTVTTWLVV 313

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMK+ADNI+KVYSTSMAMLLTM LS +LF+FKPTLQLFLGI+ICMMSL
Sbjct: 314 LNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMTLSTFLFDFKPTLQLFLGIVICMMSL 373

Query: 301 HMYFAPPGMLVDIPSTAKA-APDSLREVSVERRTDS 335
           HMYFAPP ML+D+P T K+   + L EVSV+RRT S
Sbjct: 374 HMYFAPPNMLLDMPLTVKSDEEEKLIEVSVDRRTRS 409

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147772007|emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/318 (85%), Positives = 299/318 (94%), Gaps = 4/318 (1%)

Query: 18  GILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPI 77
           GILTTLSQSNGGYKYDYATVPFLAEVFKL+VSS+LLWRE +    P+MTTEW+S+RLFPI
Sbjct: 79  GILTTLSQSNGGYKYDYATVPFLAEVFKLLVSSVLLWRECKRSPPPRMTTEWKSIRLFPI 138

Query: 78  PSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAV 137
           PSIIYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRR+LS LQWMAIVLLA+
Sbjct: 139 PSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKLSNLQWMAIVLLAI 198

Query: 138 GTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQ 197
           GTTTSQV+GCGEA CDSLF+APIQGY+LG+LSACLSALAGVYTEFLMKKN+DSLYWQNVQ
Sbjct: 199 GTTTSQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNDDSLYWQNVQ 258

Query: 198 LYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYA 257
           LYTFGAIFNM RL+LDD+R GFEKGPWW RLF+GY++TTWMVV NLGSTGLLVSWLMKYA
Sbjct: 259 LYTFGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNLGSTGLLVSWLMKYA 318

Query: 258 DNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTA 317
           DNI+KVYSTSMAMLLTMVLSV+LFNFKPTLQLFLGI+ICMMSLHMYFAPP MLVD+P T 
Sbjct: 319 DNIVKVYSTSMAMLLTMVLSVFLFNFKPTLQLFLGIVICMMSLHMYFAPPTMLVDLPLTV 378

Query: 318 KAAPDSLREVSVERRTDS 335
           K+AP+S     ++RRT+S
Sbjct: 379 KSAPES----HIDRRTNS 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053803|ref|XP_002297987.1| predicted protein [Populus trichocarpa] gi|222845245|gb|EEE82792.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/335 (84%), Positives = 313/335 (93%)

Query: 1   MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMP 60
           MQWYFVA LLT LTSSQGILTTLSQSNG Y YDYATVPFLAEVFKLV+SS+L+WRE ++ 
Sbjct: 1   MQWYFVALLLTFLTSSQGILTTLSQSNGKYLYDYATVPFLAEVFKLVLSSLLVWRECQIS 60

Query: 61  SSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 120
            S +MTTEW+SVRL+ +PSIIYL+HNNVQFATLTYVD STYQIMGNLKIVTTGILFRLFL
Sbjct: 61  PSTRMTTEWKSVRLYVVPSIIYLIHNNVQFATLTYVDASTYQIMGNLKIVTTGILFRLFL 120

Query: 121 RRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
           RRRLS LQWMAI+LLAVGTTTSQVKGCGEA CDSLFAAPIQGY+LG +SACLSALAGVYT
Sbjct: 121 RRRLSNLQWMAIILLAVGTTTSQVKGCGEASCDSLFAAPIQGYMLGAVSACLSALAGVYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
           EFLMKKNNDSLYWQNVQLYTFG+IFN+ RL+LDD+RGG+E G WWQRLF+GY+ITTWMVV
Sbjct: 181 EFLMKKNNDSLYWQNVQLYTFGSIFNLARLVLDDYRGGYENGSWWQRLFNGYSITTWMVV 240

Query: 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
            NLGSTGLLVSWLMKYADNI+KVY+TSMAMLLTMV SVYLF+FKPTLQLF GIIICMMSL
Sbjct: 241 LNLGSTGLLVSWLMKYADNIVKVYATSMAMLLTMVWSVYLFSFKPTLQLFSGIIICMMSL 300

Query: 301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
           HMYFAPP ML+D+P+  +AAP+SL+EV+VERRTDS
Sbjct: 301 HMYFAPPNMLLDLPTQVRAAPESLKEVTVERRTDS 335

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2152955	340	AT5G41760 [Arabidopsis thalian	0.994	0.979	0.785	2.9e-142
TAIR|locus:504955503	352	AT4G35335 [Arabidopsis thalian	0.868	0.826	0.384	6.5e-51
TAIR|locus:2040976	406	AT2G43240 [Arabidopsis thalian	0.859	0.709	0.289	2.5e-33
TAIR|locus:2081292	405	UTR6 "UDP-galactose transporte	0.865	0.716	0.278	4.1e-33
ZFIN|ZDB-GENE-070424-281	395	si:dkey-83k24.4 "si:dkey-83k24	0.877	0.744	0.311	5.2e-33
ZFIN|ZDB-GENE-030616-62	347	slc35a2 "solute carrier family	0.877	0.847	0.311	6.7e-33
UNIPROTKB|O77592	326	SLC35A3 "UDP-N-acetylglucosami	0.889	0.914	0.293	2.6e-31
UNIPROTKB|F1NWI8	332	SLC35A1 "Uncharacterized prote	0.937	0.945	0.290	3.3e-31
UNIPROTKB|F1P1R6	338	SLC35A1 "Uncharacterized prote	0.937	0.928	0.290	3.3e-31
UNIPROTKB|Q6YC49	326	SLC35A3 "UDP-N-acetylglucosami	0.889	0.914	0.293	4.2e-31

TAIR|locus:2152955 AT5G41760 [Arabidopsis thaliana (taxid:3702)]

 Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
 Identities = 263/335 (78%), Positives = 296/335 (88%)

Query:     3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS 62
             WYFVA LLTILTSSQGILTTLSQS+GGYKYDYATVPFLAEVFKL++S + LWRE R  SS
Sbjct:     6 WYFVAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSS 65

Query:    63 P--KMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXX 120
                ++TT+W+SVRLF IPS+IYL+HNNVQFATLTYVDTSTYQIMGNLKIVTTGI      
Sbjct:    66 TTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 125

Query:   121 XXXXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYT 180
                 S LQWMAI LLAVGTTTSQVKGCGEA CDSLF APIQGYLLG+LSA LSALAG+YT
Sbjct:   126 KRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYT 185

Query:   181 EFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240
             EFLMK+NND+LYWQN+QLYTFG++FN+ RL+ DDFR GFEKGPWWQR+FDGY+ITTW+VV
Sbjct:   186 EFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query:   241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
              NLGSTGLLVSWLMKYADNI+KVYSTSMAMLLTMV S+YLF+FKPTLQLFLGI+IC+MSL
Sbjct:   246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query:   301 HMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTDS 335
             HMYFAPP  LVD+P T +A   +L++V VE +TDS
Sbjct:   306 HMYFAPPHTLVDLPVTNEAHAKTLKQVVVEEKTDS 340

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005456 "CMP-N-acetylneuraminate transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS;IDA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:504955503 AT4G35335 [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 117/304 (38%), Positives = 173/304 (56%)

Query:     6 VATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWR---MPSS 62
             V   LTILTSSQ IL   S+  G Y+Y   T  FL    K  +S + L R W+   +   
Sbjct:    54 VTCALTILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDD 113

Query:    63 PKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXX 122
              +++T +  V++FPIP+ +YL  N +Q+    YVD   YQI+ NL I++TG+        
Sbjct:   114 NRLSTTFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKR 173

Query:   123 XXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF 182
               S +QW   +LL  G TT+Q+        D +    + G+ + ++ A LS  AGVYTE 
Sbjct:   174 KLSEIQWAGFILLCCGCTTAQLNSNS----DRVLQTSLPGWTMAIVMALLSGFAGVYTEA 229

Query:   183 LMKKN-NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241
             ++KK  + ++  QN  LY FG  FN   +++ DF     KG      F GY+  T +++ 
Sbjct:   230 IIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKG-----FFHGYSFITLLMIL 284

Query:   242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH 301
             N   +G+ VS +MKYADNI+KVYSTS+AMLLT V+SV+LFNF  +L  FLG  +  +S++
Sbjct:   285 NHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVY 344

Query:   302 MYFA 305
             ++ A
Sbjct:   345 LHSA 348

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2040976 AT2G43240 [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 89/307 (28%), Positives = 161/307 (52%)

Query:    12 ILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLW---REWRMPSSP--KMT 66
             +L   Q +L  +S+ +G + +   +V FL E+ K++ + ++L    R  ++   P   ++
Sbjct:    53 MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLS 112

Query:    67 TEWRSVR---LFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXX 123
             T  ++ R   L  +P+ +Y ++N ++F    Y + +T +++ NLK++   +         
Sbjct:   113 TFVQAARNNMLLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRR 172

Query:   124 XSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ--GYLLGVLSACLSALAGVYTE 181
              S +QW A+ LL +G + +Q++   E    +  A PI    Y+   +   + +LA VY E
Sbjct:   173 FSIIQWEALALLLIGISINQLRSLPEGA--TTVAVPIATGAYICTFIFVTVPSLASVYNE 230

Query:   182 FLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGG-FEKGPWWQRLFDGYNITTWMV 239
             + +K   D S+Y QN+ LY +GAIFN   +L     G    KGP    +  G++  T  +
Sbjct:   231 YALKSQYDTSIYLQNLFLYGYGAIFNFLGIL-----GTVIYKGPGSFDILQGHSRATMFL 285

Query:   240 VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMS 299
             + N  + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S
Sbjct:   286 ILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFIS 345

Query:   300 LHMYFAP 306
             +H +F+P
Sbjct:   346 MHQFFSP 352

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

TAIR|locus:2081292 UTR6 "UDP-galactose transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 85/305 (27%), Positives = 159/305 (52%)

Query:    12 ILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLW---REWRMPSSP--KMT 66
             +L   Q +L  +S+ +G + +   +V FL E+ K++ + ++L    R  ++   P   ++
Sbjct:    51 MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVS 110

Query:    67 TEWRSVR---LFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXX 123
             T  ++ R   L  +P+++Y ++N ++F    Y + +T +++ NLK++   +         
Sbjct:   111 TFVQAARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRR 170

Query:   124 XSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL 183
              S +QW A+ LL +G + +Q++   E             Y+  V+   + ++A V+ E+ 
Sbjct:   171 FSIIQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYA 230

Query:   184 MKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGG-FEKGPWWQRLFDGYNITTWMVVF 241
             +K   D S+Y QN+ LY +GAIFN   +L     G    KGP    +  G++  T  ++ 
Sbjct:   231 LKSQYDTSIYLQNLFLYGYGAIFNFLGIL-----GTVIYKGPGSFDILQGHSRATMFLIL 285

Query:   242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH 301
             N  + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI I  +S+H
Sbjct:   286 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMH 345

Query:   302 MYFAP 306
              +F+P
Sbjct:   346 QFFSP 350

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

ZFIN|ZDB-GENE-070424-281 si:dkey-83k24.4 "si:dkey-83k24.4" [Danio rerio (taxid:7955)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 98/315 (31%), Positives = 169/315 (53%)

Query:    28 GGYKYDYATVPFLAEVFKLVVSS--ILLWREWRMPSSPKMTTE------WRSVRLFPIPS 79
             G + Y  + V  +AEV K++     IL+ +   + S   +  +      W +++L  +PS
Sbjct:    59 GDHFYTTSAV-VMAEVLKVITCLFIILIQKRGNVKSFVSLLYDSIVIQYWDTLKL-AVPS 116

Query:    80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLAVGT 139
             +IY + NN+Q+  ++ +  +T+Q+   LKI+TT +          S +QW+++VLL  G 
Sbjct:   117 LIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLRKSLSRIQWISLVLLFAGV 176

Query:   140 TTSQVKGCGEALCDSLFAAPIQGYLLGVLS---ACLSA-LAGVYTEFLMKKNNDSLYWQN 195
                QV+       +++ AA  Q Y  G+LS   +CLS+  AGVY E ++K ++ S++ +N
Sbjct:   177 AIVQVEQESGKQKEAVTAAN-QNYFKGLLSVIISCLSSGFAGVYFEKILKGSSASVWMRN 235

Query:   196 VQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK 255
             +QL  FG +  +  +  +D     EKG     LF GY    W V+FN    GLLV+ ++K
Sbjct:   236 IQLGIFGTVLGLLGMWWNDGAAIAEKG----FLF-GYTPMVWGVIFNQAFGGLLVAVVVK 290

Query:   256 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPS 315
             YADNI+K ++TS +++++ + SVYLF F   L   LG  + + +++MY  P        S
Sbjct:   291 YADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGLVIGAVYMYSLPKAN-TSTSS 349

Query:   316 TAKAAPDSLREVSVE 330
             T+ A+     E  ++
Sbjct:   350 TSTASSSKAGESELD 364

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-030616-62 slc35a2 "solute carrier family 35 (UDP-galactose transporter), member 2" [Danio rerio (taxid:7955)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 98/315 (31%), Positives = 169/315 (53%)

Query:    28 GGYKYDYATVPFLAEVFKLVVSS--ILLWREWRMPSSPKMTTE------WRSVRLFPIPS 79
             G + Y  + V  +AEV K++     IL+ +   + S   +  +      W +++L  +PS
Sbjct:    32 GDHFYTTSAV-VMAEVLKVITCLFIILIQKRGSVKSFVSLLYDSIVIQYWDTLKL-AVPS 89

Query:    80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXXXXXXXXSTLQWMAIVLLAVGT 139
             +IY + NN+Q+  ++ +  +T+Q+   LKI+TT +          S +QW+++VLL  G 
Sbjct:    90 LIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLRKSLSRIQWISLVLLFAGV 149

Query:   140 TTSQVKGCGEALCDSLFAAPIQGYLLGVLS---ACLSA-LAGVYTEFLMKKNNDSLYWQN 195
                QV+       +++ AA  Q Y  G+LS   +CLS+  AGVY E ++K ++ S++ +N
Sbjct:   150 AIVQVEQESGKQKEAVTAAN-QNYFKGLLSVIISCLSSGFAGVYFEKILKGSSASVWMRN 208

Query:   196 VQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK 255
             +QL  FG +  +  +  +D     EKG     LF GY    W V+FN    GLLV+ ++K
Sbjct:   209 IQLGIFGTVLGLLGMWWNDGAAIAEKG----FLF-GYTPMVWGVIFNQAFGGLLVAVVVK 263

Query:   256 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPS 315
             YADNI+K ++TS +++++ + SVYLF F   L   LG  + + +++MY  P        S
Sbjct:   264 YADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGLVIGAVYMYSLPKAN-TSTSS 322

Query:   316 TAKAAPDSLREVSVE 330
             T+ A+     E  ++
Sbjct:   323 TSTASSSKAGESELD 337

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|O77592 SLC35A3 "UDP-N-acetylglucosamine transporter" [Canis lupus familiaris (taxid:9615)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 93/317 (29%), Positives = 166/317 (52%)

Query:     4 YFVATLLTILTSSQGILTTLSQS--NGGYKYDYATVPFLAEVFKLVVSSILLWREW---- 57
             Y    +L   T+S  +    S++    G +Y  +T   +AE+ K++   +L++++     
Sbjct:     7 YLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSL 66

Query:    58 ----RMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTG 113
                 R+     +     +++L  IPS IY + NN+ +  L+ +D +TYQ+   LKI+TT 
Sbjct:    67 RALNRILHDEILNKPMETLKL-AIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTA 125

Query:   114 IXXXXXXXXXXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY-LLGVLSACL 172
             +             QW+++V+L  G    Q     + L     +A  Q   L+ VL+AC 
Sbjct:   126 LFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACF 185

Query:   173 SA-LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDG 231
             S+  AGVY E ++K+   S++ +N+QL  FG+IF +  + + D     + G      F G
Sbjct:   186 SSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNG-----FFQG 240

Query:   232 YNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLF 290
             YN  TW+VV      GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT   F
Sbjct:   241 YNRLTWIVVILQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFF 300

Query:   291 LGIIICMMSLHMYFAPP 307
             LG I+ + +  +Y   P
Sbjct:   301 LGAILVITATFLYGYDP 317

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

UNIPROTKB|F1NWI8 SLC35A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 95/327 (29%), Positives = 159/327 (48%)

Query:     5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREW----RMP 60
             +  T++T++ ++  +    +++ G   Y   T   + EV KL +S  +L RE     R+ 
Sbjct:     9 YCLTVMTLVAATYTVALRYTRTVGAELYFSTTAVCITEVIKLFLSVGILARESGSLARLI 68

Query:    61 SSPKMTTEWRSVRLFP--IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXX 118
             +S K         L    +PS++Y V NN+ F  L+ +D + YQ+   LKI  T +    
Sbjct:    69 TSLKENVFGSPKELLKLSVPSLVYAVQNNMAFVALSNLDAAVYQVTYQLKIPCTALCTVL 128

Query:   119 XXXXXXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV 178
                   S LQW ++ +L  G    Q K   +A    +   P  G+    ++   S  AGV
Sbjct:   129 MLNRTLSKLQWFSVFMLCGGVILVQWKPA-QATKVQVEQNPWLGFGAITIAVLCSGFAGV 187

Query:   179 YTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM 238
             Y E ++K ++ SL+ +N+Q+Y  G +  +  + + D     EKG      F GY    W+
Sbjct:   188 YFEKVLKSSDTSLWVRNIQMYLSGIVVTLVGVYMSDGAQVLEKG-----FFYGYTCFVWL 242

Query:   239 VVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMM 298
             V+F     GL  S ++KY DNI+K +S + A++L+ V SV LF  + T+   LG I+  +
Sbjct:   243 VIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTVASVVLFGLQITVTFTLGAILVCV 302

Query:   299 SLHMYFAPPGMLVDI-PSTAKAAPDSL 324
             S++ Y  P      I PS  K++ + L
Sbjct:   303 SIYFYGLPRQDTTKIQPSETKSSKERL 329

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P1R6 SLC35A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 95/327 (29%), Positives = 159/327 (48%)

Query:     5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREW----RMP 60
             +  T++T++ ++  +    +++ G   Y   T   + EV KL +S  +L RE     R+ 
Sbjct:    15 YCLTVMTLVAATYTVALRYTRTVGAELYFSTTAVCITEVIKLFLSVGILARESGSLARLI 74

Query:    61 SSPKMTTEWRSVRLFP--IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGIXXXX 118
             +S K         L    +PS++Y V NN+ F  L+ +D + YQ+   LKI  T +    
Sbjct:    75 TSLKENVFGSPKELLKLSVPSLVYAVQNNMAFVALSNLDAAVYQVTYQLKIPCTALCTVL 134

Query:   119 XXXXXXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV 178
                   S LQW ++ +L  G    Q K   +A    +   P  G+    ++   S  AGV
Sbjct:   135 MLNRTLSKLQWFSVFMLCGGVILVQWKPA-QATKVQVEQNPWLGFGAITIAVLCSGFAGV 193

Query:   179 YTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM 238
             Y E ++K ++ SL+ +N+Q+Y  G +  +  + + D     EKG      F GY    W+
Sbjct:   194 YFEKVLKSSDTSLWVRNIQMYLSGIVVTLVGVYMSDGAQVLEKG-----FFYGYTCFVWL 248

Query:   239 VVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMM 298
             V+F     GL  S ++KY DNI+K +S + A++L+ V SV LF  + T+   LG I+  +
Sbjct:   249 VIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTVASVVLFGLQITVTFTLGAILVCV 308

Query:   299 SLHMYFAPPGMLVDI-PSTAKAAPDSL 324
             S++ Y  P      I PS  K++ + L
Sbjct:   309 SIYFYGLPRQDTTKIQPSETKSSKERL 335

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q6YC49 SLC35A3 "UDP-N-acetylglucosamine transporter" [Bos taurus (taxid:9913)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 93/317 (29%), Positives = 166/317 (52%)

Query:     4 YFVATLLTILTSSQGILTTLSQS--NGGYKYDYATVPFLAEVFKLVVSSILLWREW---- 57
             Y    +L   T+S  +    S++    G +Y  +T   +AE+ K++   +L++++     
Sbjct:     7 YLSLGILVFQTTSLVLTMRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSL 66

Query:    58 ----RMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTG 113
                 R+     +     +++L  IPS IY + NN+ +  L+ +D +TYQ+   LKI+TT 
Sbjct:    67 RALNRILHDEILNKPMETLKL-AIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTA 125

Query:   114 IXXXXXXXXXXSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY-LLGVLSACL 172
             +             QW+++V+L  G    Q     + L     +A  Q   L+ VL+AC 
Sbjct:   126 LFSVSMLSKKLGVYQWLSLVILMTGVAFVQWPSDSQELNSKELSAGSQFVGLMAVLTACF 185

Query:   173 SA-LAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDG 231
             S+  AGVY E ++K+   S++ +N+QL  FG+IF +  + + D     + G      F G
Sbjct:   186 SSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNG-----FFQG 240

Query:   232 YNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY-LFNFKPTLQLF 290
             YN  TW+VV      GL+++ ++KYADNI+K ++TS++++L+ ++S + L +F PT   F
Sbjct:   241 YNRLTWIVVVLQALGGLVIAAVIKYADNILKGFATSLSIILSTLISYFWLQDFVPTSVFF 300

Query:   291 LGIIICMMSLHMYFAPP 307
             LG I+ + +  +Y   P
Sbjct:   301 LGAILVITATFLYGYDP 317

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6YC49	S35A3_BOVIN	No assigned EC number	0.3103	0.8149	0.8374	yes	no
Q9Y2D2	S35A3_HUMAN	No assigned EC number	0.3079	0.8149	0.84	yes	no
Q8LGE9	CSTR1_ARATH	No assigned EC number	0.8029	0.9940	0.9794	yes	no
P87041	GMS1_SCHPO	No assigned EC number	0.3005	0.9223	0.8753	yes	no
O77592	S35A3_CANFA	No assigned EC number	0.3103	0.8149	0.8374	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	6e-54
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-26
pfam08449	303	pfam08449, UAA, UAA transporter family	5e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.001

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  176 bits (448), Expect = 6e-54
 Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 11/222 (4%)

Query: 77  IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLA 136
           +P+ IY + NN+ +  L+ +D +TYQ+   LKI+TT +   L L R+LS  QW +++LL 
Sbjct: 22  VPAFIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLMLGRKLSWYQWASLLLLF 81

Query: 137 VGTTTSQVKGCGEALCDSLFAAPIQGYLLG---VLSACL-SALAGVYTEFLMKKNNDSLY 192
           +G    Q+            A   Q   LG   VL+AC  S  AGVY E ++K +N S++
Sbjct: 82  LGVAIVQLDQKSSETNSKRGAE--QNPGLGLSAVLAACFTSGFAGVYFEKILKGSNTSIW 139

Query: 193 WQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSW 252
            +N+QLY FG  F +    L D     EKG      F GY    W VV      GL+V+ 
Sbjct: 140 IRNIQLYFFGIFFALLTCWLYDGSAISEKG-----FFFGYTAFVWAVVLLQAVGGLVVAV 194

Query: 253 LMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGII 294
           ++KYADNI+K ++TS+A++L+ V SV LF+F+PTL   LG I
Sbjct: 195 VVKYADNILKGFATSLAIILSTVASVLLFDFRPTLTFLLGAI 236

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score =  104 bits (262), Expect = 1e-26
 Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 77  IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLL- 135
           +P  I    NN+    L  +  +  Q+   LKI++T ++    L   L   QW ++ LL 
Sbjct: 4   VPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLK 62

Query: 136 ----AVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSA-LAGVYTEFLMKKNNDS 190
                V    S  K           +A        VLSA LS+  AGVY E ++K  +  
Sbjct: 63  LGVAIVQMVQSSAKTLMFGNPVVGLSA--------VLSALLSSGFAGVYFEKILKDGDTM 114

Query: 191 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLV 250
            + +N+QL  FG       LL  D       G      F GY    W+V       GL +
Sbjct: 115 FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG-----FFIGYPTAVWIVGLLNVGGGLCI 169

Query: 251 SWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303
             +++YADN  K + T+++++L+ + SV LF+ K +   +LG I+  ++  +Y
Sbjct: 170 GGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 46/230 (20%), Positives = 91/230 (39%), Gaps = 10/230 (4%)

Query: 79  SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVG 138
              + + + +    L Y+   T+ I  + K++   IL  L   +R S+LQ+++ +L+ +G
Sbjct: 71  VATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLG 130

Query: 139 TTT-SQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQ 197
               +               +   G  L   +  + AL G   E L KK       + + 
Sbjct: 131 VIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKH--SKEMM 188

Query: 198 LYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTW--MVVFNLGSTG--LLVSWL 253
            Y+       F L L D R G          F   + +    +++ +L        V +L
Sbjct: 189 FYSHLLSLPFFLLGLLDIRTGLLFSAE---SFCLRHPSVLFYLLLNSLTQYVGQFFVFYL 245

Query: 254 MKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303
           +     +     T++   ++++LSV LF    TLQ +LG ++  + + +Y
Sbjct: 246 ISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLY 295

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 49/284 (17%), Positives = 94/284 (33%), Gaps = 18/284 (6%)

Query: 18  GILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPI 77
           G+L  LS        +       A   + +++++LL     +            + L  +
Sbjct: 16  GLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLL 75

Query: 78  PSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFR-LFLRRRLSTLQWMAIVLLA 136
             +   +   + F  L Y   S   ++  L  + T +L   L L  RLS LQ + I+L  
Sbjct: 76  ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLAL 135

Query: 137 VGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNV 196
            G     + G             + G LL + +A L AL     + L +           
Sbjct: 136 AGVLLILLGG------GGGGILSLLGLLLALAAALLWALYTALVKRLSR------LGPVT 183

Query: 197 QLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKY 256
                  +  +  LLL    G          L     +  ++ VF+ G   LL  + ++ 
Sbjct: 184 LALLLQLLLALLLLLLFFLSGFGAPILSRAWL-----LLLYLGVFSTGLAYLLWYYALRL 238

Query: 257 ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300
               +    + +  +   +L V L     +    LG  + ++ +
Sbjct: 239 LGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV 282

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.93
PRK11272	292	putative DMT superfamily transporter inner membran	99.93
PRK15430	296	putative chloramphenical resistance permease RarD;	99.93
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.93
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.92
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.91
PRK11689	295	aromatic amino acid exporter; Provisional	99.91
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.91
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.9
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.88
KOG1581	327	consensus UDP-galactose transporter related protei	99.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.83
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.83
KOG1580	337	consensus UDP-galactose transporter related protei	99.78
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.72
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.63
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.62
COG2962	293	RarD Predicted permeases [General function predict	99.59
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.59
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.55
KOG1582	367	consensus UDP-galactose transporter related protei	99.53
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.52
KOG2766	336	consensus Predicted membrane protein [Function unk	99.48
KOG2765	416	consensus Predicted membrane protein [Function unk	99.43
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.29
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.27
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.17
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.08
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.08
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.05
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.77
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.75
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.68
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.63
COG2510	140	Predicted membrane protein [Function unknown]	98.59
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.53
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.37
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.34
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.31
PRK11689	295	aromatic amino acid exporter; Provisional	98.31
PLN00411	358	nodulin MtN21 family protein; Provisional	98.27
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.24
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.21
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.21
PRK11272	292	putative DMT superfamily transporter inner membran	98.16
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.15
PRK15430	296	putative chloramphenical resistance permease RarD;	98.1
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.06
PRK13499	345	rhamnose-proton symporter; Provisional	97.93
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.93
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.88
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.82
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.76
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.74
PRK11431	105	multidrug efflux system protein; Provisional	97.72
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.71
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.66
COG2076	106	EmrE Membrane transporters of cations and cationic	97.63
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.6
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.53
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.52
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.38
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.25
COG2076	106	EmrE Membrane transporters of cations and cationic	97.22
PRK11431	105	multidrug efflux system protein; Provisional	97.17
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.16
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.12
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.07
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.93
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.89
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.67
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.62
COG2962	293	RarD Predicted permeases [General function predict	96.34
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.16
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.15
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.15
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.01
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.95
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.5
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.33
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	93.7
PRK13499	345	rhamnose-proton symporter; Provisional	92.96
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	92.68
KOG2765	416	consensus Predicted membrane protein [Function unk	92.67
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.5
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	92.49
KOG2922	335	consensus Uncharacterized conserved protein [Funct	92.37
KOG1581	327	consensus UDP-galactose transporter related protei	91.98
KOG1580	337	consensus UDP-galactose transporter related protei	91.43
KOG4510	346	consensus Permease of the drug/metabolite transpor	91.09
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	90.07
KOG3912	372	consensus Predicted integral membrane protein [Gen	86.32
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	85.84
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	84.55
KOG1443	349	consensus Predicted integral membrane protein [Fun	81.95
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	80.74
PRK02237	109	hypothetical protein; Provisional	80.4

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-47  Score=343.33  Aligned_cols=303  Identities=38%  Similarity=0.563  Sum_probs=268.8

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcC--CC-C----Cccccchhhhhhh
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRM--PS-S----PKMTTEWRSVRLF   75 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~--~~-~----~~~~~~~~~~~~~   75 (335)
                      +|+.++++..++++..+++|+++..++++|.+++++++.|++|+.+|..+.+++.+.  .+ .    +.+...|++..+.
T Consensus        16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~   95 (345)
T KOG2234|consen   16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV   95 (345)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence            578899999999999999999997779999999999999999999999998776422  11 1    1223456688889


Q ss_pred             hHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc--cccC
Q 019845           76 PIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE--ALCD  153 (335)
Q Consensus        76 ~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~--~~~~  153 (335)
                      ++|+++|+++|+++|.++.|+|++++++..|.++++||++++++|+||++++||.++++.++|+.+++.+..++  +..+
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~  175 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSE  175 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999443221  1111


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccch
Q 019845          154 SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN  233 (335)
Q Consensus       154 ~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (335)
                      ....++..|...++.+++.||++++|.||++|+.+.+.|+||.|++.+|++++++.....|+....+     .++|+||+
T Consensus       176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~-----~gff~G~s  250 (345)
T KOG2234|consen  176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINE-----YGFFYGYS  250 (345)
T ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccccc-----CCcccccc
Confidence            2245678999999999999999999999999998889999999999999999999887777765542     45899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845          234 ITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  310 (335)
Q Consensus       234 ~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~  310 (335)
                      ..+|.+++.++.+|++++.++||+|++.|.+++.++++++.+.|+.+||.+||..+++|+.+|+.++++|+..|++.
T Consensus       251 ~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  251 SIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999777654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=1.3e-37  Score=276.18  Aligned_cols=227  Identities=40%  Similarity=0.684  Sum_probs=202.7

Q ss_pred             cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      ....+|+..++++||++|+++|++.|.+++++|++++|++.|+++++||++++++||||++++||.++.+.++|+.+++.
T Consensus        10 ~~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~   89 (244)
T PF04142_consen   10 VWKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL   89 (244)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence            33457788889999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCccccC--------cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhccc
Q 019845          145 KGCGEALCD--------SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFR  216 (335)
Q Consensus       145 ~~~~~~~~~--------~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      ++....+.+        .....+..|.++++++++++|+++||.||++|+++.++|.||+|++.+|++++++.....|+.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~  169 (244)
T PF04142_consen   90 SSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGS  169 (244)
T ss_pred             CCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            664431110        012345789999999999999999999999999888999999999999999999887666665


Q ss_pred             ccccCCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Q 019845          217 GGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC  296 (335)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lV  296 (335)
                      ...++|     +++|+++++|..++.++++|+++++++||+|++.|.+++.++++++.++++++||.+++..+++|+.+|
T Consensus       170 ~~~~~g-----~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  170 AISESG-----FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             ccccCC-----chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            544443     789999999999999999999999999999999999999999999999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=1.4e-26  Score=212.68  Aligned_cols=231  Identities=19%  Similarity=0.209  Sum_probs=183.8

Q ss_pred             hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc
Q 019845           70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE  149 (335)
Q Consensus        70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~  149 (335)
                      ++..+|.+.|+++..+|.+...|++|++.+..+++.++.+++++++++++||||+++.|+.|+++.++|+.++...|...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~  156 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS  156 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence            33446888899999999999999999999999999999999999999999999999999999999999999887766433


Q ss_pred             cccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Q 019845          150 ALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLF  229 (335)
Q Consensus       150 ~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (335)
                      ++.+...+++..|++++++++.++|+++|++|+..|+++  ......++.+++.+++.+.....|..+. ++       +
T Consensus       157 ~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~--~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~-------~  226 (334)
T PF06027_consen  157 GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP--RVEFLGMLGLFGFIISGIQLAILERSGI-ES-------I  226 (334)
T ss_pred             cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC--HHHHHHHHHHHHHHHHHHHHHheehhhh-hc-------c
Confidence            222222356789999999999999999999999998763  3344567788888888876655454322 11       1


Q ss_pred             ccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845          230 DGYNITTWMVV----FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  305 (335)
Q Consensus       230 ~~~~~~~~~~i----~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~  305 (335)
                       .|+...+...    +...+...++..++++.++...+....++.+++.++++++||+++++..++|.++|+.|..+|+.
T Consensus       227 -~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  227 -HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             -CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEc
Confidence             1232222221    12223445667888999998888888889999999999999999999999999999999999998


Q ss_pred             CCCCCC
Q 019845          306 PPGMLV  311 (335)
Q Consensus       306 ~~~~~~  311 (335)
                      .+++..
T Consensus       306 ~~~~~~  311 (334)
T PF06027_consen  306 AESPEE  311 (334)
T ss_pred             cCCccc
Confidence            766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=2e-24  Score=202.19  Aligned_cols=294  Identities=11%  Similarity=0.081  Sum_probs=203.3

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      |-|..+++.=+......++.|.+-+.|-   ++....+.|..+..++..++.+..++...  ..+.+|+++..+.+.+++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~---~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~--~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGL---NIYPFLGYSYLLASLLLLPSLFFTNRSRS--LPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCC---CccHHHHHHHHHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHHHHHH
Confidence            5678888888888888999999964443   44456788877776655544432222111  122346666666777777


Q ss_pred             HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHH------hcccccHHHHHHHHHHHHHHhhhcccCCCcc-----
Q 019845           82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLF------LRRRLSTLQWMAIVLLAVGTTTSQVKGCGEA-----  150 (335)
Q Consensus        82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~------l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~-----  150 (335)
                      .+.++.+.++|++|++++.++++.++.|++++++++++      +|||++++||+|++++++|+.++..++....     
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~  167 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASS  167 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence            66778899999999999999999999999999999999      6999999999999999999998765322100     


Q ss_pred             -------cc---C-cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH-HHHHHHHHHHhhhccccc
Q 019845          151 -------LC---D-SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYT-FGAIFNMFRLLLDDFRGG  218 (335)
Q Consensus       151 -------~~---~-~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  218 (335)
                             +.   + ....+...|+++++++++++|++.+..+|..+++++.. ..+.+... .+.++..+.....+. +.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~-~~t~~~~~~~~~~~~~~~l~~~~~-~~  245 (358)
T PLN00411        168 PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAF-TVSFLYTVCVSIVTSMIGLVVEKN-NP  245 (358)
T ss_pred             cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHh-HHHHHHHHHHHHHHHHHHHHHccC-Cc
Confidence                   00   0 01112245999999999999999999999887764322 22222222 333333332322111 00


Q ss_pred             ccCCcccccccccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHH
Q 019845          219 FEKGPWWQRLFDGYNITTWMVVFNLG----STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGII  294 (335)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~i~~~a----i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~  294 (335)
                       .  .    ....++...+ .+++.+    ++..+..+.+++.++...+...++.|++++++|++++||++++.+++|++
T Consensus       246 -~--~----~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~  317 (358)
T PLN00411        246 -S--V----WIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI  317 (358)
T ss_pred             -c--c----ceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence             0  0    0112222222 222223    34445566888999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCCCCCC
Q 019845          295 ICMMSLHMYFAPPGML  310 (335)
Q Consensus       295 lVi~gv~ly~~~~~~~  310 (335)
                      +|+.|+++.++.++|+
T Consensus       318 LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        318 LITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHHHhhhhhh
Confidence            9999999987654443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.93  E-value=2.3e-23  Score=192.07  Aligned_cols=264  Identities=20%  Similarity=0.283  Sum_probs=199.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHH
Q 019845           34 YATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTG  113 (335)
Q Consensus        34 ~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~a  113 (335)
                      +....+++.+...+.+.......++  . ++.+   +....+.+.++++.+++.+.+.+++|+|.++++++++++|++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm  105 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFKF--P-KSRK---IPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM  105 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccc--c-CCCc---ChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence            4446777777777766555443331  1 1122   22334678899999999999999999999999999999999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q 019845          114 ILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLF-AAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLY  192 (335)
Q Consensus       114 lls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~-~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~  192 (335)
                      +++++++|||++++||.++++.++|+.+....+..+++.++.. .....|+++++++.+++|+.++++||..++++.+.+
T Consensus       106 i~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~  185 (303)
T PF08449_consen  106 ILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPW  185 (303)
T ss_pred             HHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence            9999999999999999999999999999987664432211111 112349999999999999999999999998877766


Q ss_pred             HHHHHHHHHHHHHHHHHHhh---hcccccccCCcccccccccchHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019845          193 WQNVQLYTFGAIFNMFRLLL---DDFRGGFEKGPWWQRLFDGYNITTWM---VVFNLGSTGLLVSWLMKYADNIIKVYST  266 (335)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~ai~g~~~~~~lk~~~a~~~~~~~  266 (335)
                      ........++.++..+....   .+..+.       .++...++...+.   ..+..+++...+.+.++..++...+..+
T Consensus       186 ~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-------~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~  258 (303)
T PF08449_consen  186 ELMFYTNLFSLPFLLILLFLLPTGEFRSA-------IRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT  258 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHhhHH-------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence            66666777788877665543   122111       1122223222111   1234456667777888999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845          267 SMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  310 (335)
Q Consensus       267 ~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~  310 (335)
                      .++.++++++|+++|||++++.+|+|.++++.|+.+|+.+++|+
T Consensus       259 t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  259 TLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999887665

; GO: 0055085 transmembrane transport

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.93  E-value=4e-23  Score=189.53  Aligned_cols=272  Identities=11%  Similarity=0.058  Sum_probs=193.7

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-H
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-Y   82 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~   82 (335)
                      .+.+++.++.|+++.+++|...    ++.++.+.++.|.....++..++..+++++ . + .+++|++   ..+.+.+ .
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~----~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~-~-~~~~~~~---~~~~g~~~~   79 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGV----ESWPPLMMAGVRFLIAGILLLAFLLLRGHP-L-P-TLRQWLN---AALIGLLLL   79 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C-C-cHHHHHH---HHHHHHHHH
Confidence            4568889999999999999886    457889999999998876655444433221 1 1 1222332   3444544 3


Q ss_pred             HHHhHHHHHHH-hcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845           83 LVHNNVQFATL-TYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ  161 (335)
Q Consensus        83 ~~~~~l~f~al-~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~  161 (335)
                      ..++.+.+++. +++|++.++++.++.|+++++++.+ +|||++++||.|+.++++|+.++..++..        +....
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~  150 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchH
Confidence            56788889999 9999999999999999999999985 79999999999999999999988543211        12246


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF  241 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (335)
                      |+++.+++++++|+++++.||..+++  +......++. .+.+...+.....+.. .          ....+...|..+.
T Consensus       151 G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~i~  216 (292)
T PRK11272        151 GAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEML-AAGVVLLIASLLSGER-L----------TALPTLSGFLALG  216 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHH-HHHHHHHHHHHHcCCc-c----------cccCCHHHHHHHH
Confidence            99999999999999999999865432  3333333333 3333333322221110 0          0011222233333


Q ss_pred             H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845          242 N-----LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  308 (335)
Q Consensus       242 ~-----~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~  308 (335)
                      +     .+++.....+.+|+.++...+...+++|+++.+++++++||++|+.+++|+++++.|+++.+..++
T Consensus       217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            3     334445566777899999999999999999999999999999999999999999999988766544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.93  E-value=2.5e-23  Score=191.27  Aligned_cols=275  Identities=11%  Similarity=0.084  Sum_probs=188.7

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      |-++..++..+.|+.+.+..|..     +++++.+.++.|.+++.++...+...+++.....+..+++++.......++.
T Consensus         8 ~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          8 QGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            34667888889999999999986     2378899999999998765544433222110000011134444334455667


Q ss_pred             HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845           82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ  161 (335)
Q Consensus        82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~  161 (335)
                      ...++.++|+|++++|+++++++.++.|+++++++++++|||++++||.+++++++|+.++..++.         +..  
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---------~~~--  151 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---------SLP--  151 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---------Ccc--
Confidence            888999999999999999999999999999999999999999999999999999999998864321         111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHH--
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV--  239 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  239 (335)
                        .+.+++++++|++.++.||..+++.......+.+....+.+....   ..+...  ..     ..........+..  
T Consensus       152 --~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~-----~~~~~~~~~~~~~~~  219 (296)
T PRK15430        152 --IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSST--SH-----MGQNPMSLNLLLIAA  219 (296)
T ss_pred             --HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCc--cc-----ccCCcHHHHHHHHHH
Confidence              357788999999999888864322112222222222222222111   111100  00     0001111111111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845          240 VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  304 (335)
Q Consensus       240 i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~  304 (335)
                      .+..+++..+..+.+|+.++...+...+++|+++.++|++++||++++.+++|+++|+.|+.+..
T Consensus       220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            12344566777888999999999999999999999999999999999999999999988765543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.93  E-value=1.7e-22  Score=186.00  Aligned_cols=279  Identities=11%  Similarity=0.051  Sum_probs=188.3

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      +..+..++..+.|+++.+++|..-    ++.++.+..++|..+..+...++. +.++      .  +++...   ..+++
T Consensus         4 ~~~l~~l~~~~~Wg~~~~~~k~~~----~~~~p~~~~~~R~~~a~~~l~~~~-~~~~------~--~~~~~~---~~g~~   67 (299)
T PRK11453          4 KDGVLALLVVVVWGLNFVVIKVGL----HNMPPLMLAGLRFMLVAFPAIFFV-ARPK------V--PLNLLL---GYGLT   67 (299)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHH----hcCCHHHHHHHHHHHHHHHHHHHh-cCCC------C--chHHHH---HHHHH
Confidence            345667888999999999999886    458899999999887544332222 1111      1  123221   22332


Q ss_pred             -HHHHhHHHHHHHhc-CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccc
Q 019845           82 -YLVHNNVQFATLTY-VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP  159 (335)
Q Consensus        82 -~~~~~~l~f~al~~-~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~  159 (335)
                       ...+..+.|.+++| .|++.+.++.++.|+++++++++++|||++++||.+++++++|+.++..++.+.      .+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~  141 (299)
T PRK11453         68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVA  141 (299)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchh
Confidence             34555677889998 688999999999999999999999999999999999999999999887543221      1123


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHH
Q 019845          160 IQGYLLGVLSACLSALAGVYTEFLMKKNNDS-LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM  238 (335)
Q Consensus       160 ~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (335)
                      ..|+.+.+++++++|++.++.||..++++.. ......+....+.+.........+......      .....++...|.
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  215 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI------HSLVTIDMTTIL  215 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh------hhhccCCHHHHH
Confidence            4699999999999999999999976554322 111112222222221111111112110000      001122333444


Q ss_pred             HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845          239 VVFNLGSTG-----LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  308 (335)
Q Consensus       239 ~i~~~ai~g-----~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~  308 (335)
                      .+++.++.+     .+....+++.++...+...+++|+++.++|++++||++++.+++|+++|+.|+++...+++
T Consensus       216 ~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        216 SLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            444444443     3444556778888888999999999999999999999999999999999999987655443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.92  E-value=1.3e-22  Score=187.10  Aligned_cols=279  Identities=11%  Similarity=0.125  Sum_probs=183.6

Q ss_pred             HhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHH
Q 019845           13 LTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFAT   92 (335)
Q Consensus        13 ~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~a   92 (335)
                      .+....+..|+.-++  .+ .+....+.+.....+.+... ++.+.+ +  +.+.++++.......|++.+.++.+.+++
T Consensus        13 ~~~~~~~~NK~~l~~--~~-~P~~~~~~~~~~~~~~~~~~-~~~~~~-~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   85 (302)
T TIGR00817        13 LNVYFNIYNKKLLNV--FP-YPYFKTLISLAVGSLYCLLS-WSSGLP-K--RLKISSALLKLLLPVAIVHTIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHhh--CC-hhHHHHHHHHHHHHHHHHHH-HHhCCC-C--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344445566776532  12 23445566666654443332 322211 1  11122444445667788888899999999


Q ss_pred             HhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHH
Q 019845           93 LTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACL  172 (335)
Q Consensus        93 l~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~  172 (335)
                      ++|++++.+++++++.|+++++++++++|||+++++|.+++++++|+.+....+ .        +....|+++.++++++
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-~--------~~~~~G~~~~l~a~~~  156 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-L--------SFNWAGFLSAMISNIT  156 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-c--------cccHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998764211 1        1235699999999999


Q ss_pred             HHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccch-HHHHHHHHHHHHH-----
Q 019845          173 SALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN-ITTWMVVFNLGST-----  246 (335)
Q Consensus       173 ~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ai~-----  246 (335)
                      +|++.++.||..++++.+......+....+.++.++.....+......+. + .......+ ...+...+..+++     
T Consensus       157 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (302)
T TIGR00817       157 FVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHG-F-MQAISGVNVTKIYTVSLVAAMGFFHFY  234 (302)
T ss_pred             HHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHH-H-HHhhcccCchHHHHHHHHHHHHHHHHH
Confidence            99999999998773222222233343445555555544332211100000 0 00000011 1122212112211     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845          247 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  309 (335)
Q Consensus       247 g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~  309 (335)
                      +......+++.++.+.+....++|++++++|++++||++++.+++|+++++.|+++|++.+.|
T Consensus       235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            112224688999999999999999999999999999999999999999999999999876443

specificities overlap.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.91  E-value=1.1e-22  Score=176.32  Aligned_cols=302  Identities=17%  Similarity=0.217  Sum_probs=210.3

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhc---CC----CcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCC---C----ccccch
Q 019845            4 YFVATLLTILTSSQGILTTLSQS---NG----GYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS---P----KMTTEW   69 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~---~~----~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~---~----~~~~~~   69 (335)
                      .++-++++..++.+.+..||+++   +|    ++++-++..+|+.|+.|+.+...+-.|..+....   +    +.+.+.
T Consensus         5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf   84 (372)
T KOG3912|consen    5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF   84 (372)
T ss_pred             hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence            35567788899999999999963   11    3566778899999999998765444443322111   1    111233


Q ss_pred             hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc
Q 019845           70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE  149 (335)
Q Consensus        70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~  149 (335)
                      +.. .+..|++++...+.+.|.|+.+++++.+|+++...++|+++++..+||++++.+||+++....+|++++...+...
T Consensus        85 ~p~-lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~  163 (372)
T KOG3912|consen   85 NPV-LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL  163 (372)
T ss_pred             Ccc-eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence            443 3566999999999999999999999999999999999999999999999999999999999999999997764321


Q ss_pred             ccc-CcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh----cccc--cccCC
Q 019845          150 ALC-DSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD----DFRG--GFEKG  222 (335)
Q Consensus       150 ~~~-~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~  222 (335)
                      .+. -...++.+.|+++++.+.+.-|.+.++.||.+|+++.++....-+-..+|.++.-......    ..+.  ...+|
T Consensus       164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g  243 (372)
T KOG3912|consen  164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG  243 (372)
T ss_pred             ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence            110 0112456789999999999999999999999998876444434444666744332222111    1000  00111


Q ss_pred             cc--cccc---cccchHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHH
Q 019845          223 PW--WQRL---FDGYNITTW-MV--VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGII  294 (335)
Q Consensus       223 ~~--~~~~---~~~~~~~~~-~~--i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~  294 (335)
                      .+  +.+.   +++-+.... +.  +...+..+..--.+.|+.++..+.....+++.+.++++....+|.+...|+.|.+
T Consensus       244 ~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFl  323 (372)
T KOG3912|consen  244 VLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFL  323 (372)
T ss_pred             chhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Confidence            00  0000   001110000 00  0111112222225678999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhccCC
Q 019845          295 ICMMSLHMYFAP  306 (335)
Q Consensus       295 lVi~gv~ly~~~  306 (335)
                      +.+.|+.+||..
T Consensus       324 iLi~Gi~lY~~i  335 (372)
T KOG3912|consen  324 ILIMGIILYNQI  335 (372)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999854

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.91  E-value=6.3e-22  Score=181.87  Aligned_cols=274  Identities=10%  Similarity=0.052  Sum_probs=189.5

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      |.|++.++.++.|+++.+.+|..-    +.+++....++|..+..++..++.  .++     +.++.+++.  ....++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~----~~~~P~~~~~~R~~~a~l~l~~~~--~~~-----~~~~~~~~~--~~~~~l~   70 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVS----ESLGPVGGAAMIYSVSGLLLLLTV--GFP-----RLRQFPKRY--LLAGGLL   70 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHH----ccCChHHHHHHHHHHHHHHHHHHc--ccc-----ccccccHHH--HHHHhHH
Confidence            567889999999999999999986    558889899999777655433221  111     111112221  2233445


Q ss_pred             HHHHhHHHHHHHhc----CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccC--cc
Q 019845           82 YLVHNNVQFATLTY----VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--SL  155 (335)
Q Consensus        82 ~~~~~~l~f~al~~----~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~--~~  155 (335)
                      ++.++.+.|.++++    ++++...++.++.|+++++++++++|||++++||.+++++++|+.++..++.+.+..+  .+
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            66777888887754    6788889999999999999999999999999999999999999998875542111000  00


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHH
Q 019845          156 FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT  235 (335)
Q Consensus       156 ~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (335)
                      ......|+++++++++++|+++++.||..++++ +. .  ......+. +..+.....+ ...           ...+..
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~-~--~~~~~~~~-~l~~~~~~~~-~~~-----------~~~~~~  213 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GI-T--LFFILTAL-ALWIKYFLSP-QPA-----------MVFSLP  213 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-ch-h--HHHHHHHH-HHHHHHHHhc-Ccc-----------ccCCHH
Confidence            112346999999999999999999999765543 22 1  11112222 2222222211 100           011222


Q ss_pred             HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845          236 TWMVVF----NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  305 (335)
Q Consensus       236 ~~~~i~----~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~  305 (335)
                      .|..+.    ..+++..+..+.+|+.++...+...+++|+++.+++++++||++++.+++|+++|+.|+++...
T Consensus       214 ~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        214 AIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            232222    2333455566788999999999999999999999999999999999999999999999866544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.91  E-value=1.4e-21  Score=176.13  Aligned_cols=257  Identities=16%  Similarity=0.110  Sum_probs=181.2

Q ss_pred             hhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHH
Q 019845           14 TSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATL   93 (335)
Q Consensus        14 ~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al   93 (335)
                      |+.+.+..|+.-++   ..++....+.|.+...++..+...++ +      .+++|+.  .....++...+++.+.|.|+
T Consensus         1 Wg~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~-~------~~~~~~~--~~~~~~~~~~l~~~~~~~a~   68 (260)
T TIGR00950         1 WGTTGVVIGQYLEG---QVPLYFAVFRRLIFALLLLLPLLRRR-P------PLKRLLR--LLLLGALQIGVFYVLYFVAV   68 (260)
T ss_pred             CcchHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHhc-c------CHhHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence            57788899997522   34667677777776655544333222 1      1112222  22333445678999999999


Q ss_pred             hcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHH
Q 019845           94 TYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLS  173 (335)
Q Consensus        94 ~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~  173 (335)
                      +|+|+++..++.++.|+++++++.+++|||++++||.++.++++|+.++..++..        +....|+.+.+++++++
T Consensus        69 ~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~~~G~~~~l~a~~~~  140 (260)
T TIGR00950        69 KRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SINPAGLLLGLGSGISF  140 (260)
T ss_pred             HhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------cccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999988654321        12357999999999999


Q ss_pred             HHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH--HHHHHHHHHHHHHHHHH
Q 019845          174 ALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLLVS  251 (335)
Q Consensus       174 a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~ai~g~~~~  251 (335)
                      +..+++.||..++.+.+....+.+.+..+.++..+.....+ +.   .      ..+..++  ..+..++...++..+..
T Consensus       141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (260)
T TIGR00950       141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-PN---P------QALSLQWGALLYLGLIGTALAYFLWN  210 (260)
T ss_pred             HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-CC---C------CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987665432222222233445544444332211 10   0      0111111  11122233345556667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHh
Q 019845          252 WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL  300 (335)
Q Consensus       252 ~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv  300 (335)
                      +.+|+.++...+...+++|+++.+++++++||+++..+++|..+++.|+
T Consensus       211 ~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       211 KGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            7889999999999999999999999999999999999999999999886

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.90  E-value=3.8e-21  Score=180.46  Aligned_cols=280  Identities=14%  Similarity=0.170  Sum_probs=187.8

Q ss_pred             HHhhhhHHhhHhhhcCCCccee-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHH
Q 019845           12 ILTSSQGILTTLSQSNGGYKYD-YATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQF   90 (335)
Q Consensus        12 l~~~~~~i~~k~~~~~~~~~~~-~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f   90 (335)
                      ..+....+..|+.-+    .++ |.+...+|.+++.+++..+ +..+.+ +.++.....++.......|+++...+...+
T Consensus        59 ~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~-~~~~~~~~~~~~~~llp~gl~~~~~~~~~~  132 (350)
T PTZ00343         59 ALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLY-WATGFR-KIPRIKSLKLFLKNFLPQGLCHLFVHFGAV  132 (350)
T ss_pred             HHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHH-HHhCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444555666642    245 6778888888876655433 222111 112221111233345566888777777788


Q ss_pred             HHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHH
Q 019845           91 ATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSA  170 (335)
Q Consensus        91 ~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aa  170 (335)
                      .|+++.+++.+++++++.|+++++++++++|||++++++.++++.++|+.+....+.         +....|++++++++
T Consensus       133 ~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~  203 (350)
T PTZ00343        133 ISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAMLSN  203 (350)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999864221         12357999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCC---chHHHHHHH--HHHHHHHHHHHHhhhcccccccCCcccccccccchH-HHHHHHHHHH
Q 019845          171 CLSALAGVYTEFLMKKNND---SLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLG  244 (335)
Q Consensus       171 l~~a~~~v~~~k~~k~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~a  244 (335)
                      +++|+.+++.||.+++.+.   +....+.+.  ...+.++.++.....|.................+.. ..+..++..+
T Consensus       204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~  283 (350)
T PTZ00343        204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG  283 (350)
T ss_pred             HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence            9999999999998876431   111122222  345666665554433321100000000000111111 1111222334


Q ss_pred             HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          245 STGLLVS----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       245 i~g~~~~----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      +.+.+..    +++++.++...+...+++++++.++|++++||++++.+++|.++++.|+++|+..
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            4444444    4788899999999999999999999999999999999999999999999999864

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.90  E-value=1.1e-20  Score=173.49  Aligned_cols=271  Identities=10%  Similarity=-0.071  Sum_probs=189.2

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY   82 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~   82 (335)
                      -+..+++..+.++.+..++|+.-    +++++.+.++.|.++..++...+..+.++  .  ..+++|+   .....++++
T Consensus        13 ~~~~~~la~~~~~~~~~~~K~~~----~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~--~~~~~~~---~~~~~g~~~   81 (293)
T PRK10532         13 PILLLLIAMASIQSGASLAKSLF----PLVGAPGVTALRLALGTLILIAIFKPWRL--R--FAKEQRL---PLLFYGVSL   81 (293)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHHHHhHHhc--c--CCHHHHH---HHHHHHHHH
Confidence            46788899999999999999986    35888889999999987665444322211  1  1122233   244566778


Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhH
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQG  162 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G  162 (335)
                      ...+.+.|++++|+|++.+.++.++.|+++++++.    ||.++.  .++.++++|+.++..++.+.+      +.+..|
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~------~~~~~G  149 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVS------HVDLTG  149 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcc------cCChHH
Confidence            88899999999999999999999999999998873    555544  456678999988764432211      123469


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccc--chHHHHHHH
Q 019845          163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDG--YNITTWMVV  240 (335)
Q Consensus       163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i  240 (335)
                      +++.+++++++|++.+..||..++++ +. ....+ ...+.+...+.....+. ..         ..+.  +....++.+
T Consensus       150 ~ll~l~aa~~~a~~~v~~r~~~~~~~-~~-~~~~~-~~~~~~~l~~~~~~~~~-~~---------~~~~~~~~~~l~lgv  216 (293)
T PRK10532        150 AALALGAGACWAIYILSGQRAGAEHG-PA-TVAIG-SLIAALIFVPIGALQAG-EA---------LWHWSILPLGLAVAI  216 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC-ch-HHHHH-HHHHHHHHHHHHHHccC-cc---------cCCHHHHHHHHHHHH
Confidence            99999999999999999999866543 32 22232 23344333333222111 00         0011  111123333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845          241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  309 (335)
Q Consensus       241 ~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~  309 (335)
                      +...++..+..+.+++.++...+...+++|+++.++|++++||++++.+++|+++|+.|+..+....+|
T Consensus       217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            444445556678889999999999999999999999999999999999999999999998887655443

>TIGR00803 nst UDP-galactose transporter

Probab=99.88  E-value=2.7e-21  Score=170.42  Aligned_cols=221  Identities=27%  Similarity=0.413  Sum_probs=185.4

Q ss_pred             hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCc
Q 019845           75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDS  154 (335)
Q Consensus        75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~  154 (335)
                      ..+|+..|+.+|.+.+.++.+.++...+.. +.+.+.++++....++++++..||.++.....|+..++.++..++.  .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~--~   78 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT--L   78 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc--c
Confidence            467899999999999999999999999999 9999999999999999999999999999999999988754432110  1


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845          155 LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI  234 (335)
Q Consensus       155 ~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (335)
                      ..++...|..+.+.+++++++.++|+||..|+++...+.++++++.++.+.+.......+......     .+++.+++.
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  153 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISN-----FGFFIGYPT  153 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhc-----cCcccCCch
Confidence            113446788888888889999999999988876667899999999988887655443332221111     134667888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          235 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       235 ~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                      ..|..++.++++|.++++++|+.|++.+++...++++++.++|+++|||+++..+++|+.+|+.|+++|
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            888888889999999999999999999999999999999999999999999999999999999999886

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.87  E-value=1.3e-20  Score=165.68  Aligned_cols=270  Identities=14%  Similarity=0.157  Sum_probs=209.6

Q ss_pred             CCcceehhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhh
Q 019845           28 GGYKYDYAT-VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGN  106 (335)
Q Consensus        28 ~~~~~~~~~-~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~  106 (335)
                      .++||...+ .+|++.+.+++.+..++... ++ . .+.+..|.   .|...++...+...++|.||+|++-++..+.++
T Consensus        44 ~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~-k~-~-~~~~apl~---~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKs  117 (327)
T KOG1581|consen   44 DGERFEHSLFLVFCQRLVALLVSYAMLKWW-KK-E-LSGVAPLY---KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKS  117 (327)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcc-cc-c-CCCCCchh---HHhHHHHHhhcchHHHHHHHHhccchHHHHHHH
Confidence            456776666 77889999998885554222 21 1 22222333   467778999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019845          107 LKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK  186 (335)
Q Consensus       107 ~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~  186 (335)
                      ++.+.++++..++.|+|++.+++++..+...||.+....+.+++..++...+...|+.++...-++.|+.+..++++.|+
T Consensus       118 cKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~  197 (327)
T KOG1581|consen  118 CKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK  197 (327)
T ss_pred             hhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc
Confidence            99999999999999999999999999999999999876544432222222356789999999999999999999999998


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 019845          187 NNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV---VFNLGSTGLLVSWLMKYADNIIKV  263 (335)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~ai~g~~~~~~lk~~~a~~~~  263 (335)
                      .+.+.+.....+.+++++.+....+..+ ..  .+   ...|...++...+-+   -.+.++|+.++.+.++..++++-.
T Consensus       198 ~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~--~~---av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t  271 (327)
T KOG1581|consen  198 YKVSSLHMMFGVNLFSAILNGTYLILQG-HL--LP---AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFT  271 (327)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHhhhcCC-CC--ch---HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHH
Confidence            8777777777778889998888754321 11  00   123444444333332   245678889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845          264 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM  309 (335)
Q Consensus       264 ~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~  309 (335)
                      ..+.++.+++.++|.++||+++++.||+|..+|+.|+++-...+++
T Consensus       272 ~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  272 TIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999998765544433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.85  E-value=5.3e-19  Score=161.37  Aligned_cols=272  Identities=14%  Similarity=0.136  Sum_probs=171.0

Q ss_pred             HHHHHHHHHHhhhhHHhhH-hhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845            4 YFVATLLTILTSSQGILTT-LSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY   82 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k-~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~   82 (335)
                      .++-++..+.++..-+.+| ..+++     +..+  +.......+...+....+..+...+..+++++  ......++..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-----~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   73 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-----PDFL--WWALLAHSVLLTPYGLWYLAQVGWSRLPATFW--LLLAISAVAN   73 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-----hHHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchhhH--HHHHHHHHHH
Confidence            3566778888889989998 44321     1122  22222222222222222111111111111222  2234556678


Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhH
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQG  162 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G  162 (335)
                      ..++.+.+.|+++.|++..+.+.++.|+++++++++++|||++++||.|+.+++.|+.++..++..+        ....|
T Consensus        74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~--------~~~~g  145 (281)
T TIGR03340        74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ--------HRRKA  145 (281)
T ss_pred             HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc--------cchhH
Confidence            8999999999999999999999999999999999999999999999999999999999886543211        11347


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCC--chHHH-HHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHH--HH
Q 019845          163 YLLGVLSACLSALAGVYTEFLMKKNND--SLYWQ-NVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT--TW  237 (335)
Q Consensus       163 ~~l~l~aal~~a~~~v~~~k~~k~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  237 (335)
                      +.++++++++++++.++.||..++.++  +.... .......+.++..... ..+....         ........  .+
T Consensus       146 ~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~  215 (281)
T TIGR03340       146 YAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYL-KRHGRSM---------FPYARQILPSAT  215 (281)
T ss_pred             HHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHH-HHhccch---------hhhHHHHHHHHH
Confidence            778899999999999887775433221  11111 1111111122211111 1111100         00011111  12


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845          238 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  302 (335)
Q Consensus       238 ~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l  302 (335)
                      ...+..+++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+.+
T Consensus       216 ~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       216 LGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            22233344555566777888887777888899999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.83  E-value=3.1e-17  Score=149.37  Aligned_cols=280  Identities=19%  Similarity=0.195  Sum_probs=185.5

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY   82 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~   82 (335)
                      .+...++..+.++......|....+   ..+.....+.|.............+++.  ...+....+  .......++..
T Consensus         8 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~   80 (292)
T COG0697           8 GLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLLLLEPR--GLRPALRPW--LLLLLLALLGL   80 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHHHhhcc--cccccccch--HHHHHHHHHHH
Confidence            3455667778888888888887633   2444545555666665552112222210  011111111  11234556667


Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFR-LFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ  161 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~-~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~  161 (335)
                      ...+.+++.++++++++.++++.++.|++++++++ +++|||+++++|.++.+++.|+.++..++..+..     . ...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----~-~~~  154 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----L-SLL  154 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----H-HHH
Confidence            88999999999999999999999999999999997 7779999999999999999999999876654310     1 357


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF  241 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (335)
                      |+.+.+++++++|++.++.|+.. +.+ +........ ..+...........+..   ..     .....+....+..++
T Consensus       155 g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~g~~  223 (292)
T COG0697         155 GLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQ-LLLALLLLLLFFLSGFG---AP-----ILSRAWLLLLYLGVF  223 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHH-HHHHHHHHHHHHhcccc---cc-----CCHHHHHHHHHHHHH
Confidence            99999999999999999999887 332 211111011 11111111111111110   00     000111112222233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       242 ~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      ..+++..+..+.+++.++...+...+++++++.+++++++||+++..+++|.++++.|+.+.+.+
T Consensus       224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            33345566667788888888888889999999999999999999999999999999999888766

>TIGR00688 rarD rarD protein

Probab=99.83  E-value=5e-18  Score=152.84  Aligned_cols=249  Identities=12%  Similarity=0.064  Sum_probs=166.3

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCC-CCccc-cchhh-hhhhhHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPS-SPKMT-TEWRS-VRLFPIP   78 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~-~~~~~-~~~~~-~~~~~i~   78 (335)
                      |.+++.++..+.|+.+.++.|...     ..++.+.++.|.+++..+..++....+++.+ .++.+ .++++ .....+.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~-----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLK-----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence            567889999999999999999842     2788999999999877654333322211100 01111 11122 2235667


Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA  158 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~  158 (335)
                      +++...++.++++|++++|+++++++.++.|+++++++++++|||++++||.+++++++|+.++..++ ++        .
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-~~--------~  147 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-GS--------L  147 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-CC--------c
Confidence            77888999999999999999999999999999999999999999999999999999999999875432 11        1


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHH
Q 019845          159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM  238 (335)
Q Consensus       159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (335)
                      .    .+++++++++|.+.+..||..+++ ..   +.........++........++... .       .......+.++
T Consensus       148 ~----~~~l~aa~~~a~~~i~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~l  211 (256)
T TIGR00688       148 P----WEALVLAFSFTAYGLIRKALKNTD-LA---GFCLETLSLMPVAIYYLLQTDFATV-Q-------QTNPFPIWLLL  211 (256)
T ss_pred             h----HHHHHHHHHHHHHHHHHhhcCCCC-cc---hHHHHHHHHHHHHHHHHHHhccCcc-c-------ccCchhHHHHH
Confidence            1    346788999999999988864432 11   1111011122222211111122110 0       00111111221


Q ss_pred             H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019845          239 V--VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYL  280 (335)
Q Consensus       239 ~--i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~  280 (335)
                      .  .+...++..+....+|+.++...+...+++|+++.++++++
T Consensus       212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            1  12345566777888999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.78  E-value=3.6e-18  Score=144.94  Aligned_cols=259  Identities=16%  Similarity=0.154  Sum_probs=187.8

Q ss_pred             CcceehhH-HHHHHHHHHHHHHHHHH-HHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhh
Q 019845           29 GYKYDYAT-VPFLAEVFKLVVSSILL-WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGN  106 (335)
Q Consensus        29 ~~~~~~~~-~v~~~e~~~l~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~  106 (335)
                      +++|..+. .||+....-.+++-.++ .|++.  +.++.     +-..|+..++.|.+.+....-|+|+.|.++..+-++
T Consensus        47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~--~~D~t-----~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKS  119 (337)
T KOG1580|consen   47 IEKFTFALALVFFQCTANTVFAKVLFLIRKKT--EIDNT-----PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKS  119 (337)
T ss_pred             hheehHHHHHHHHHHHHHHHHHHhheeecccc--cccCC-----cchHHHHHHHHHHHHHHhccchhcccCCcHHHhccc
Confidence            35666554 66777766666664443 22221  11111     222477778889999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019845          107 LKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK  186 (335)
Q Consensus       107 ~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~  186 (335)
                      ++|+.++++.+++.+++++|+++.++++..+||++....+......  ......+|.++.+++-...++.+..+||+.+.
T Consensus       120 cKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~--e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~  197 (337)
T KOG1580|consen  120 CKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA--EDKTFGFGELLLILSLAMDGLTGSIQDRIRAS  197 (337)
T ss_pred             CCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC--cccccchHHHHHHHHHHhcccchhHHHHHHHh
Confidence            9999999999999999999999999999999999998764322111  11234579999999999999999999998776


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 019845          187 NNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTWM---VVFNLGSTGLLVSWLMKYADNIIK  262 (335)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~ai~g~~~~~~lk~~~a~~~  262 (335)
                      +..+-......+.+++++....+.+.. |..   +    +..|...++...|-   ..+...+|++++.....+.+....
T Consensus       198 yq~~g~~MM~~~NlwStL~Lg~g~lfTGElw---e----F~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtC  270 (337)
T KOG1580|consen  198 YQRTGTSMMFYTNLWSTLYLGAGLLFTGELW---E----FFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTC  270 (337)
T ss_pred             hccCchhhHHHHHHHHHHHhhhhheehhhHH---H----HHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeE
Confidence            543322233445677887766655432 100   0    01122344433332   223456788888777788899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          263 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       263 ~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                      ++.+..+..++++.|+++|+++++..||+|..+|+.+...=
T Consensus       271 SivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  271 SIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             EEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            99999999999999999999999999999999999997543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.72  E-value=5.9e-18  Score=146.22  Aligned_cols=217  Identities=11%  Similarity=0.086  Sum_probs=155.1

Q ss_pred             hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCC--c--c
Q 019845           75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG--E--A  150 (335)
Q Consensus        75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~--~--~  150 (335)
                      ..+++++.+.+..+.|++++|++.+.+.++.++.|.+|.++++.+||||.++.+-++..+.+.||+++.+|..-  +  .
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~  179 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE  179 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence            35678888888899999999999999999999999999999999999999999999999999999999888631  1  1


Q ss_pred             ccCcc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh-hhcccccccCCcccccc
Q 019845          151 LCDSL-FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRL  228 (335)
Q Consensus       151 ~~~~~-~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  228 (335)
                      ..+.. ......|....+.++++.|...+..|++.|+-+...-+  .+....+.+.+++... +.+++.+  +       
T Consensus       180 g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msv--syf~~i~lV~s~I~~~~ig~~~lP--~-------  248 (346)
T KOG4510|consen  180 GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSV--SYFSLITLVVSLIGCASIGAVQLP--H-------  248 (346)
T ss_pred             ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEe--hHHHHHHHHHHHHHHhhccceecC--c-------
Confidence            11111 12335688888888888888888899988876532111  1122334444444332 1222211  0       


Q ss_pred             cccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          229 FDGYNITTWMVV-FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       229 ~~~~~~~~~~~i-~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                       .+-+++....+ +..-++++++...++.-.+...+..++...+++.++.+++|||.||++.|+|+++|+.++...
T Consensus       249 -cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  249 -CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             -cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence             11111111111 223356777777777666666778999999999999999999999999999999999886543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.63  E-value=4.7e-14  Score=124.54  Aligned_cols=291  Identities=16%  Similarity=0.168  Sum_probs=193.1

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCC--cceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhh-hhhHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGG--YKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVR-LFPIP   78 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~--~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~i~   78 (335)
                      +|-+..+.+++.+=.-++..+++++...  .+|+-. .+-...+++++++.......++.....|...+|++.. +.+..
T Consensus        12 ~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf-~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt   90 (349)
T KOG1443|consen   12 MNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLF-VTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT   90 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchH-HHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence            3556677777888888888899875433  344433 4456677888777544322212122234566787643 44555


Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA  158 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~  158 (335)
                      |+.-..+-.+..++++|++.+.|++.+++.++|+.+++..+-=||.++.-..-+++..+|+.+....+.+         -
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq---------f  161 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ---------F  161 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc---------e
Confidence            6667788899999999999999999999999999999999888999999888899999999988765432         2


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCC---chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH-
Q 019845          159 PIQGYLLGVLSACLSALAGVYTEFLMKKNND---SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI-  234 (335)
Q Consensus       159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  234 (335)
                      ...|..+++.+++++|+-..+.++++++++.   ++.....++.-+..+..++..+..|+......    .+.+...+. 
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~----s~~f~~~d~~  237 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITS----SSIFRFQDTG  237 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchh----hhHHHhcCcc
Confidence            3679999999999999999999999887641   12122222222333333333333343221100    111221111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          235 TTWMVVFNLGSTGLLVSWLM--------KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       235 ~~~~~i~~~ai~g~~~~~~l--------k~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      ..+.++...+++|.. ++++        ...+.++.+++.-..-+.+.+++..+.+|+++..-|+|..+++.|+..|..+
T Consensus       238 ~~~rv~g~i~l~g~l-aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~  316 (349)
T KOG1443|consen  238 LILRVIGLISLGGLL-AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE  316 (349)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence            123333333444432 2222        2345555566666777888999999999999999999999999999999554


Q ss_pred             C
Q 019845          307 P  307 (335)
Q Consensus       307 ~  307 (335)
                      +
T Consensus       317 ~  317 (349)
T KOG1443|consen  317 P  317 (349)
T ss_pred             c
Confidence            3

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.62  E-value=6.5e-13  Score=121.67  Aligned_cols=269  Identities=14%  Similarity=0.158  Sum_probs=175.8

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY   82 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~   82 (335)
                      .+++.++.++.|++.++..|...   +  .++.+.+  +..+..++........++    ++. +.++....-.+.+++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g--~~~~~~~--~~~~g~l~~~~~~~~~~~----~~~-~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---G--GPYSQTL--GTTFGALILSIAIAIFVL----PEF-WALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---C--CHHHHHH--HHHHHHHHHHHHHHHHhC----Ccc-cccHHHHHHHHHHHHH
Confidence            47788899999999999999875   1  2333333  333333322222111111    111 1122222234556678


Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhh-hHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHHhhhcccCCCccccCcccc
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGN-LKIVTTGILFRLFLRRRLSTLQ----WMAIVLLAVGTTTSQVKGCGEALCDSLFA  157 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~-~~pl~~alls~~~l~er~~~~q----~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~  157 (335)
                      ...|.+++.+.+++..+.+..+.+ ..+++.++++.+++|||.++++    +.|+++.++|+.++...+.++...++ ..
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~-~~  148 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKS-EF  148 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccc-cc
Confidence            899999999999999999999999 8999999999999999999999    99999999999988665432211000 01


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHH---HHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845          158 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYW---QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI  234 (335)
Q Consensus       158 ~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (335)
                      +...|+.+.++++++++++.+..|+. + ++ +...   +..-+...+++++.+.   .+.+      |     ..  +.
T Consensus       149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~------~-----~~--~~  209 (290)
T TIGR00776       149 NFKKGILLLLMSTIGYLVYVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGH---ILAK------P-----LK--KY  209 (290)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHH---hccc------c-----hH--HH
Confidence            12459999999999999999988865 2 22 2222   2222222344333322   0000      0     01  11


Q ss_pred             HHHHHHH---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHH----HHHHHHHHHhhhc
Q 019845          235 TTWMVVF---NLGSTGLLVSWLMK-YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF----LGIIICMMSLHMY  303 (335)
Q Consensus       235 ~~~~~i~---~~ai~g~~~~~~lk-~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~----~G~~lVi~gv~ly  303 (335)
                      ..|..++   ..+++..+.....+ +.++......++.+|+.+++++++++||+.+..++    +|.++++.|+.+-
T Consensus       210 ~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       210 AILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence            1121111   12333333334446 77888888899999999999999999999999999    9999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.59  E-value=2.7e-12  Score=113.43  Aligned_cols=274  Identities=15%  Similarity=0.111  Sum_probs=181.1

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      |-+++.+..-+.|+..+...|+-+     +.+..++.--|-+-.+.+.+.++...++++...+..+++|.+..+.+.+++
T Consensus         7 ~Gil~~l~Ay~lwG~lp~y~kll~-----~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           7 KGILLALLAYLLWGLLPLYFKLLE-----PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            457788889999999999999995     345566666666666655544443222221212234455666666777888


Q ss_pred             HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845           82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ  161 (335)
Q Consensus        82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~  161 (335)
                      -..+-.++.+|.++-..-++++-.+.+|++..+++.+++|||+++.||+++++..+||..-.+..++         -|..
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~---------lpwv  152 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS---------LPWV  152 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC---------CcHH
Confidence            8888889999999999999999999999999999999999999999999999999999987664322         2332


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHH
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV  240 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (335)
                      .    +.-++.+++++. .||..|-+.. .......    .-.+..+...+..+......       ..+..+.. ++.+
T Consensus       153 a----l~la~sf~~Ygl-~RK~~~v~a~~g~~lE~l----~l~p~al~yl~~l~~~~~~~-------~~~~~~~~-~LLv  215 (293)
T COG2962         153 A----LALALSFGLYGL-LRKKLKVDALTGLTLETL----LLLPVALIYLLFLADSGQFL-------QQNANSLW-LLLV  215 (293)
T ss_pred             H----HHHHHHHHHHHH-HHHhcCCchHHhHHHHHH----HHhHHHHHHHHHHhcCchhh-------hcCCchHH-HHHH
Confidence            2    233455566654 5555554321 2222222    22233333332222111000       00112212 2222


Q ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          241 FNLGSTG---LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       241 ~~~ai~g---~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      ....+..   .+.+..-|+.+=...++.+|.+|.+-.+++++++||+++..+....+.+-.|+.+|..+
T Consensus       216 ~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         216 LAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             HhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            2111222   22334446677777889999999999999999999999999999999999999988765

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.59  E-value=1e-14  Score=126.85  Aligned_cols=229  Identities=16%  Similarity=0.227  Sum_probs=153.8

Q ss_pred             hhhHHHHHHHHHhHHHHHHHhc-CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccc-
Q 019845           74 LFPIPSIIYLVHNNVQFATLTY-VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEAL-  151 (335)
Q Consensus        74 ~~~i~a~l~~~~~~l~f~al~~-~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~-  151 (335)
                      .|++.-.+++..|.+..+++++ +|.+...++++..++.+++++++++|+|++.+|+.++++..+|+.+.......+.. 
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            4666667888999999999995 89999999999999999999999999999999999999999999987654322210 


Q ss_pred             ----cC-----cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHH-HHHHHHHHHHH--hhhcccccc
Q 019845          152 ----CD-----SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY-TFGAIFNMFRL--LLDDFRGGF  219 (335)
Q Consensus       152 ----~~-----~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~  219 (335)
                          .|     +.......|+.+...+.+.+|..++|+|..+|+++.. |..+++.. +.+.++.++..  +..+|....
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~  224 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAF  224 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHh
Confidence                00     0111224698888999999999999999999987632 33333322 22333332221  011221111


Q ss_pred             cCCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHH
Q 019845          220 EKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYA-------DNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLG  292 (335)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~-------~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G  292 (335)
                      ...+...+.....-+..|..++.+.+.+.   .++|..       ++...+....++..++.++|+..|.+++++..|+|
T Consensus       225 ~se~~~~p~~g~~vP~~~~yLl~n~L~Qy---~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lG  301 (330)
T KOG1583|consen  225 KSESYLIPLLGFKVPSMWVYLLFNVLTQY---FCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLG  301 (330)
T ss_pred             cCcceeccccCccccHHHHHHHHHHHHHH---HHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHH
Confidence            11000011111111234444444554443   344432       23333444467889999999999999999999999


Q ss_pred             HHHHHHHhhhccCC
Q 019845          293 IIICMMSLHMYFAP  306 (335)
Q Consensus       293 ~~lVi~gv~ly~~~  306 (335)
                      +++|+.|..+|...
T Consensus       302 a~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  302 AALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988654

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.55  E-value=2.1e-14  Score=130.85  Aligned_cols=221  Identities=19%  Similarity=0.252  Sum_probs=158.9

Q ss_pred             hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCc
Q 019845           75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDS  154 (335)
Q Consensus        75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~  154 (335)
                      ....|+.++++..+...++++.|.+.+|+++.+.|+++.++++++.+|+.++.-++++.....||.+....+.       
T Consensus        86 llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------  158 (316)
T KOG1441|consen   86 LLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------  158 (316)
T ss_pred             HHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------
Confidence            3456889999999999999999999999999999999999999999999999999999999999998876322       


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHH--HHHHHHHH-HHHhhhcccccccCCccccccccc
Q 019845          155 LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNM-FRLLLDDFRGGFEKGPWWQRLFDG  231 (335)
Q Consensus       155 ~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  231 (335)
                        +....|.+..+.+.+..++.+++.++++++++.+..-.|...+  -.+..+.+ +.....+... .. +    .....
T Consensus       159 --~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~-~----~~~~~  230 (316)
T KOG1441|consen  159 --SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FV-G----FLTAP  230 (316)
T ss_pred             --cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc-ee-e----eeccc
Confidence              2246799999999999999999999999643322211222212  22333333 2111111111 00 0    01112


Q ss_pred             chHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845          232 YNITTWMVVFNL--G-STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  308 (335)
Q Consensus       232 ~~~~~~~~i~~~--a-i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~  308 (335)
                      ++...+..++..  + ..++....++.+.++++-+++..+..++..+.|+++|+|+.++.+..|+++-+.|+++|++.+.
T Consensus       231 ~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  231 WFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            222211111111  1 2244455677888888888888888888899999999999999999999999999999998765


Q ss_pred             CC
Q 019845          309 ML  310 (335)
Q Consensus       309 ~~  310 (335)
                      ++
T Consensus       311 ~~  312 (316)
T KOG1441|consen  311 KE  312 (316)
T ss_pred             hh
Confidence            44

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.53  E-value=7.4e-13  Score=115.04  Aligned_cols=230  Identities=17%  Similarity=0.174  Sum_probs=167.8

Q ss_pred             cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      +..+||.   |.+.+.+....+.+..-++.|++.++..+.++++.+.+.+.+.++=|+|+++..+.+..+..+|.+...+
T Consensus       102 r~iP~rt---Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  102 RVIPWRT---YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTL  178 (367)
T ss_pred             eecchhH---hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhh
Confidence            3445664   6777888888889999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Q 019845          145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPW  224 (335)
Q Consensus       145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (335)
                      .|...+.     +-+..|.+++-+|-++.|+-+-.+||.+|..+.+-....+.-+..|.++.+..+.....  ....   
T Consensus       179 ADs~~sP-----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge--~f~a---  248 (367)
T KOG1582|consen  179 ADSQTSP-----NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE--LFSA---  248 (367)
T ss_pred             cccccCC-----CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc--chhh---
Confidence            6654321     22357988877888888999899999998765432221222334466665555443210  0000   


Q ss_pred             cccccccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHh
Q 019845          225 WQRLFDGYNITTWMVVFNLG----STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL  300 (335)
Q Consensus       225 ~~~~~~~~~~~~~~~i~~~a----i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv  300 (335)
                       ..+...+++.++...+..+    +|...+-..+|..++...+..++.+..++.++|+++|..++|....-|..+|..|+
T Consensus       249 -~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI  327 (367)
T KOG1582|consen  249 -WTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGI  327 (367)
T ss_pred             -hHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHH
Confidence             0122233443443332222    23333334568888888888999999999999999999999999999999999999


Q ss_pred             hhccCCCC
Q 019845          301 HMYFAPPG  308 (335)
Q Consensus       301 ~ly~~~~~  308 (335)
                      ++...+++
T Consensus       328 ~Ln~ysk~  335 (367)
T KOG1582|consen  328 YLNMYSKR  335 (367)
T ss_pred             HhhcccCC
Confidence            98766543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.52  E-value=2.9e-12  Score=114.70  Aligned_cols=287  Identities=13%  Similarity=0.171  Sum_probs=186.1

Q ss_pred             HHHHHHHHHhhhhHHhhHhhhcCCCcceehhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHH
Q 019845            5 FVATLLTILTSSQGILTTLSQSNGGYKYDYAT-VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYL   83 (335)
Q Consensus         5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~-~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~   83 (335)
                      +..+.-++......+..|+.-.+  ++|+..- .++.+.+.+.+.. .+. +.-+  .-.....+|+..+++..+++++.
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~--y~f~~~l~l~~~Q~l~s~~~v-~~l-k~~~--lv~~~~l~~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSS--YNFPMGLLLMLLQSLASVLVV-LVL-KRLG--LVNFRPLDLRTAKKWFPVSLLFV   88 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHH-HHH-HHhc--eeecCCcChHHHHHHccHHHHHH
Confidence            33444555555666666776544  6677765 3345555554321 112 2211  11112335677777778888998


Q ss_pred             HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHH
Q 019845           84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY  163 (335)
Q Consensus        84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~  163 (335)
                      +.-...-.+++|++.+++++++...|+++++....++|.|.++.-|.++....+|......++..-         ...|.
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf---------~~~gY  159 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF---------NLRGY  159 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee---------cchhH
Confidence            888888899999999999999999999999999999999999999999999999998876654331         23488


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH-hhhcccccccCCcccccccccc-hHHHHHHHH
Q 019845          164 LLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRL-LLDDFRGGFEKGPWWQRLFDGY-NITTWMVVF  241 (335)
Q Consensus       164 ~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~  241 (335)
                      .+++...+..+...++.||..+..+.+.+.....-.+.+.+...+.. ...|+.+...+       +..+ ....|..+.
T Consensus       160 ~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~-------~~~~~~~~~~~~~~  232 (314)
T KOG1444|consen  160 SWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLN-------FDNWSDSSVLVVML  232 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhh-------cccccchhHHHHHH
Confidence            99999999999999999998876543221111111233444444333 23444311111       1111 223344444


Q ss_pred             HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019845          242 NLGSTGLLVSW----LMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDI  313 (335)
Q Consensus       242 ~~ai~g~~~~~----~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~~~~  313 (335)
                      ..++.|..+.|    +.+..++..-..........+.+.+.+++|++.++.-++|..+-++|..+|+....++++.
T Consensus       233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            44444544443    4455555555555544455666777778899999999999999999999998776555443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.48  E-value=1.3e-14  Score=124.83  Aligned_cols=226  Identities=16%  Similarity=0.230  Sum_probs=167.3

Q ss_pred             cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      .+..||.   |.+.|+.+.-+|.....|.||++....+++.+..++.+.+++|++||.|+.+.|+.|+.++..||.++..
T Consensus        74 ~~~~~~h---Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~  150 (336)
T KOG2766|consen   74 IKAKWRH---YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF  150 (336)
T ss_pred             HHHHHHH---hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence            3444664   6777888888999999999999999999999999999999999999999999999999999999998877


Q ss_pred             cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Q 019845          145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPW  224 (335)
Q Consensus       145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (335)
                      .+...+ ..+..+++..|+.+++.++-++|..++.+|.+.|+-  +......++.++|.+++.+-.+.+. ...      
T Consensus       151 sDV~ag-d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~--d~~elm~~lgLfGaIIsaIQ~i~~~-~~~------  220 (336)
T KOG2766|consen  151 SDVHAG-DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA--DRVELMGFLGLFGAIISAIQFIFER-HHV------  220 (336)
T ss_pred             eeeccc-cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHhhhc-cce------
Confidence            654321 112246788899999999999999999999988865  3344456778889988888754321 111      


Q ss_pred             cccccccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhh
Q 019845          225 WQRLFDGYNITTWMVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH  301 (335)
Q Consensus       225 ~~~~~~~~~~~~~~~i---~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~  301 (335)
                         .--+|++.....+   +..-+...+....+|..++..-+....++-.++.++  ..||-+.+|...+..+.+..|..
T Consensus       221 ---~tl~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Gli  295 (336)
T KOG2766|consen  221 ---STLHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLI  295 (336)
T ss_pred             ---eeEeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhE
Confidence               0112332222111   112223344455566666666666666677777777  78888999999999999999999


Q ss_pred             hccCCCC
Q 019845          302 MYFAPPG  308 (335)
Q Consensus       302 ly~~~~~  308 (335)
                      +|....+
T Consensus       296 iYs~re~  302 (336)
T KOG2766|consen  296 IYSTREK  302 (336)
T ss_pred             Eeecccc
Confidence            9965444

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.43  E-value=1e-11  Score=112.78  Aligned_cols=220  Identities=19%  Similarity=0.227  Sum_probs=150.8

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA  158 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~  158 (335)
                      +.+-++.|.....||.+++.+..+++.+++-+||..++..+.+||+++.+.+++++.+.||+++...+..++ .|...+.
T Consensus       166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~-~~~~a~~  244 (416)
T KOG2765|consen  166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN-SDLPASR  244 (416)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc-ccCCccc
Confidence            446788999999999999999999999999999999999999999999999999999999999977654332 1222345


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHH---HHHHHHHHhhhcccccccCCcccccccccchHH
Q 019845          159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFG---AIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT  235 (335)
Q Consensus       159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (335)
                      +..|.++.+++|+.+|++.+..||...+|+...-++ .++...|   .++..+..++.+.- ..|.       |.-.+..
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~-lffGfvGLfnllllwP~l~iL~~~-~~e~-------F~lP~~~  315 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQ-LFFGFVGLFNLLLLWPPLIILDFF-GEER-------FELPSST  315 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHH-HHHHHHHHHHHHHHhHHHHHHHHh-ccCc-------ccCCCCc
Confidence            688999999999999999999998777664222222 2223323   22322222222211 1111       1111111


Q ss_pred             HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845          236 TWMVVFNLGSTGLLVS-----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG  308 (335)
Q Consensus       236 ~~~~i~~~ai~g~~~~-----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~  308 (335)
                      ....++...+.+.+++     ...-..++.+.....+++++.+.+...++-|.++++.+++|...|+.|-.+.|....
T Consensus       316 q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  316 QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            1111222223333333     222234455555555678899999999999999999999999999999887776543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.32  E-value=5.5e-09  Score=90.48  Aligned_cols=215  Identities=12%  Similarity=0.038  Sum_probs=138.0

Q ss_pred             chhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845           68 EWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC  147 (335)
Q Consensus        68 ~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~  147 (335)
                      +|+....|   +......|.++|.+++.+|.+++..+.++.|+.++++    ..||..  +...+.+.+.|..+..-.+.
T Consensus        70 ~~~~~~~y---GvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~--d~vwvaLAvlGi~lL~p~~~  140 (292)
T COG5006          70 QRLALLAY---GVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLR--DFVWVALAVLGIWLLLPLGQ  140 (292)
T ss_pred             hhHHHHHH---HHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchh--hHHHHHHHHHHHHhheeccC
Confidence            45544433   5667889999999999999999999999999998875    345554  44455566777776653332


Q ss_pred             CccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccc
Q 019845          148 GEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQR  227 (335)
Q Consensus       148 ~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (335)
                      +.      ++.+..|..+.+.+..||+.+-+..+|..+.++..- -...-+ ..+.++.++......       ++   .
T Consensus       141 ~~------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~-g~a~gm-~vAaviv~Pig~~~a-------g~---~  202 (292)
T COG5006         141 SV------WSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA-GVAVGM-LVAALIVLPIGAAQA-------GP---A  202 (292)
T ss_pred             Cc------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch-HHHHHH-HHHHHHHhhhhhhhc-------ch---h
Confidence            22      133457999999999999999888888775443211 111111 123333222221111       10   1


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845          228 LFDGYNITTWMVVFNLGSTGLLVS-----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  302 (335)
Q Consensus       228 ~~~~~~~~~~~~i~~~ai~g~~~~-----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l  302 (335)
                      ++ .++  .....+..++.+..+.     ..+++.+...-+...+++|.++.+.|++++||.+|+.||+|++.|+.+..-
T Consensus       203 l~-~p~--ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         203 LF-SPS--LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             hc-ChH--HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            11 122  1111122233333333     355666666666777889999999999999999999999999999998876


Q ss_pred             ccCCCCCCCC
Q 019845          303 YFAPPGMLVD  312 (335)
Q Consensus       303 y~~~~~~~~~  312 (335)
                      .....+|+..
T Consensus       280 ~~lt~~~~~~  289 (292)
T COG5006         280 STLTARKPAV  289 (292)
T ss_pred             cccccCCCCC
Confidence            6666555543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.29  E-value=5.8e-11  Score=92.03  Aligned_cols=138  Identities=18%  Similarity=0.192  Sum_probs=111.6

Q ss_pred             ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845            1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI   80 (335)
Q Consensus         1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~   80 (335)
                      |.|.+.-++..++++..+++.|..-    +..++...-++|.++.+.++..+....++.+.....  +.|.+....+.|+
T Consensus         2 ~~~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~--~~k~~lflilSGl   75 (140)
T COG2510           2 MAAIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI--GPKSWLFLILSGL   75 (140)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc--CcceehhhhHHHH
Confidence            3566677888999999999999986    556777788899999888877776655543221111  2233334566777


Q ss_pred             HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      ....+-.++|.|++.-+++...-+..++|++++++++++||||++.++|+|+.+..+|+.++..
T Consensus        76 a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          76 AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            7889999999999999999999999999999999999999999999999999999999988753

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.27  E-value=1.4e-12  Score=113.62  Aligned_cols=216  Identities=17%  Similarity=0.221  Sum_probs=161.8

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA  158 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~  158 (335)
                      ++.+.+.-....+.++|.+.+-+++-++...+|+.+++++++|+|-+..-..+.++...|-.+-...++.+      ..-
T Consensus       109 svVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~------~~l  182 (347)
T KOG1442|consen  109 SVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST------GTL  182 (347)
T ss_pred             hheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc------Ccc
Confidence            34455555555668999999999999999999999999999999999888887777666664432222111      234


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHH
Q 019845          159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTW  237 (335)
Q Consensus       159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  237 (335)
                      +..|.++++.++++-|+.++|++|.....++.+|...+.....+.++.++...+. |....       ..+.+-+.+..|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v-------~~~~~l~a~~Fw  255 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV-------VGFPHLPAIKFW  255 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH-------cCcccchHHHHH
Confidence            4679999999999999999999987776667888888888888888777766442 22111       112223355677


Q ss_pred             HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          238 MVVFNLGSTGLLVSWLM----KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       238 ~~i~~~ai~g~~~~~~l----k~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      ..+...++.|..++++.    |..++.+.++..+.....-+++++.+++|.-+..-|-|-.+|+.|...|.+.+
T Consensus       256 ~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  256 ILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            77666777787777654    55677777777777777778899999999999999999999999998887643

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.17  E-value=1.4e-09  Score=92.31  Aligned_cols=279  Identities=15%  Similarity=0.150  Sum_probs=178.2

Q ss_pred             HHHHhhhhHHhhHhhh----cCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHH
Q 019845           10 LTILTSSQGILTTLSQ----SNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVH   85 (335)
Q Consensus        10 ~~l~~~~~~i~~k~~~----~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~   85 (335)
                      .++..+.++|++...+    ++.++..+ ...++++.+.|.+-. .++.+.+-  .+-|    .++...+.+++++..+.
T Consensus        10 ~~lsYc~sSIlmTltNKyVls~~gfnMn-flll~vQSlvcvv~l-~iLk~l~~--~~fR----~t~aK~WfpiSfLLv~M   81 (309)
T COG5070          10 ASLSYCFSSILMTLTNKYVLSNLGFNMN-FLLLAVQSLVCVVGL-LILKFLRL--VEFR----LTKAKKWFPISFLLVVM   81 (309)
T ss_pred             HHHHHHHHHHHHHHhhHheecCCCCchh-hHHHHHHHHHHHHHH-HHHHHHhH--hhee----hhhhhhhcCHHHHHHHH
Confidence            4556666777776664    34343333 235667777765432 22321111  0011    23444456778877777


Q ss_pred             hHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHH
Q 019845           86 NNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLL  165 (335)
Q Consensus        86 ~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l  165 (335)
                      -.-.--+++|++.+.+++.++..++.+|.....++|.|++.....+.++..+.-.+..+.+.....-.  .+.-..|.++
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~W  159 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLW  159 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEE
Confidence            67777899999999999999999999999999999999999999999888888777766543211000  0122468899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh-hhcccccccCCcccccccccchH--HHHHHHHH
Q 019845          166 GVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFN  242 (335)
Q Consensus       166 ~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~  242 (335)
                      +...++.++..-...||..|-.+..-....++-...+.++.+...+ .+||....        .-++.+.  ..|+.+-.
T Consensus       160 m~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--------~annl~~d~l~am~ISg  231 (309)
T COG5070         160 MFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--------LANNLSVDSLMAMFISG  231 (309)
T ss_pred             EehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--------hhcCCChHHHHHHHHHH
Confidence            9999998887767777766643322122223334456666555443 35664320        1122222  33444422


Q ss_pred             HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          243 LG-ST-GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       243 ~a-i~-g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      .. ++ ..+-+++.+..++..-++...+...-..+.|.++|||+.+...+....+=..+..+|...
T Consensus       232 l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava  297 (309)
T COG5070         232 LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            11 11 233456667777777777777777788899999999999999999998888777777644

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.08  E-value=5.7e-09  Score=86.19  Aligned_cols=141  Identities=18%  Similarity=0.150  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcC-----CCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccc-c--ch
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKN-----NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-G--YN  233 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~  233 (335)
                      |.++++.+.++.|+..++.|+.++++     +.+.+....+....+.++.++.....|.....+..   ..... .  .+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~---~~~~~~~~~~~   77 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFF---SEIFGEELSSD   77 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH---HHhhhhhhcch
Confidence            67889999999999999999999883     33444444555566777766665554433211110   00000 0  01


Q ss_pred             HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845          234 ITTWMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  305 (335)
Q Consensus       234 ~~~~~~i~~~ai----~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~  305 (335)
                      ...+..++..++    .+.....++++.+++..++...+..+...+.|+++|||++|..+++|.++.+.|+++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            122222222232    234444678999999999999999999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.08  E-value=1.2e-09  Score=86.57  Aligned_cols=123  Identities=21%  Similarity=0.170  Sum_probs=93.0

Q ss_pred             HhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-HHHHhHHHHH
Q 019845           13 LTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-YLVHNNVQFA   91 (335)
Q Consensus        13 ~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~~~~~~l~f~   91 (335)
                      .|+...++.|...    +++++....+.+...... ...+....++++   ....++++.......+.+ ....+.+.+.
T Consensus         2 ~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    2 SWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKP---FKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             eeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccc---ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            4677778888875    347888888999888875 333332222211   111123333334555666 5789999999


Q ss_pred             HHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845           92 TLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ  143 (335)
Q Consensus        92 al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~  143 (335)
                      ++++++++..+++.++.|+++++++++++|||++++|+.|+.+.+.|+.++.
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.05  E-value=1.6e-09  Score=85.10  Aligned_cols=71  Identities=24%  Similarity=0.367  Sum_probs=63.4

Q ss_pred             HHHHHH-HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCC
Q 019845           77 IPSIIY-LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG  148 (335)
Q Consensus        77 i~a~l~-~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~  148 (335)
                      ..+.+. ..++.++++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.+
T Consensus        39 ~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   39 LAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            335554 488999999999999 58889999999999999999999999999999999999999999876643

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.77  E-value=1.7e-07  Score=78.36  Aligned_cols=211  Identities=16%  Similarity=0.189  Sum_probs=134.1

Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccc
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP  159 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~  159 (335)
                      .+.+..|+.+..+++.++++.++.+..++-.|+-++++..||+|+..-++++.++...|++++...+..       ..+.
T Consensus        61 i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~a~e  133 (290)
T KOG4314|consen   61 IFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------HADE  133 (290)
T ss_pred             EEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------hhhh
Confidence            456788999999999999999999999999999999999999999999999999999999999865432       1345


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCC---chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHH
Q 019845          160 IQGYLLGVLSACLSALAGVYTEFLMKKNND---SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT  236 (335)
Q Consensus       160 ~~G~~l~l~aal~~a~~~v~~~k~~k~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (335)
                      +.|+...+.++..+|++.|..|+.....+.   +.++  ..+.++-..+.-...+....... |+       .+.+....
T Consensus       134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~Fm--S~LGF~NL~~~~~~~lIL~~T~V-E~-------~qsFA~~P  203 (290)
T KOG4314|consen  134 IIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFM--SCLGFFNLCFISFPALILAFTGV-EH-------LQSFAAAP  203 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHH--HHHHHHHHHHHhhhHHHHHHhch-HH-------HHHHhhCC
Confidence            789999999999999999999987754321   1111  11112222221111111000000 00       01111112


Q ss_pred             HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          237 WMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       237 ~~~i~~~ai----~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      |......+.    ....+.+-+-....+..+.-...+.+..+.+..++-+-..+...+.|.+++..|-.+.-.|.
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            322221111    11222222222223333333344555667788877777788899999999999976654443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.75  E-value=2.8e-07  Score=71.87  Aligned_cols=65  Identities=12%  Similarity=0.068  Sum_probs=61.2

Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      ++|..+..+...+++++|.+.+..+.++.++++++++++++|||++++|++|+.+..+|+.++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            56888999999999999999999999999999999999999999999999999999999988753

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.68  E-value=9.6e-06  Score=72.49  Aligned_cols=215  Identities=13%  Similarity=0.166  Sum_probs=134.1

Q ss_pred             hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhh-hhHHHHHHHHHHHHhcccccHHHHH----HHHHHHHHHhhhcc
Q 019845           70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMG-NLKIVTTGILFRLFLRRRLSTLQWM----AIVLLAVGTTTSQV  144 (335)
Q Consensus        70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~-~~~pl~~alls~~~l~er~~~~q~~----~i~l~~~Gv~iv~~  144 (335)
                      +.+..-.+.+++-.+.+..+|.+++++..+.+.=+. ..+.+.+++.++++++|--+..++.    ++++..+|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            444455678889999999999999999887666554 7788889999999999999888876    78888999998877


Q ss_pred             cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH-HHHHhhhcccccccCCc
Q 019845          145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFN-MFRLLLDDFRGGFEKGP  223 (335)
Q Consensus       145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  223 (335)
                      .+.+++..++ ..+.--|....+++.+.+..+.+..+- .+-++   +..-.-... |.++. .+.....  ++.     
T Consensus       123 ~~~~~~~~~~-~~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~---~~~~lPqai-Gm~i~a~i~~~~~--~~~-----  189 (269)
T PF06800_consen  123 QDKKSDKSSS-KSNMKKGILALLISTIGYWIYSVIPKA-FHVSG---WSAFLPQAI-GMLIGAFIFNLFS--KKP-----  189 (269)
T ss_pred             cccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHh-cCCCh---hHhHHHHHH-HHHHHHHHHhhcc--ccc-----
Confidence            6654432111 122235788888888888777666543 32221   111111111 22222 2222111  110     


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH----HHHHHHHHHHHH
Q 019845          224 WWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTL----QLFLGIIICMMS  299 (335)
Q Consensus       224 ~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~----~~~~G~~lVi~g  299 (335)
                          +++...+...+.-+.-+++.+..-...+..+....-..+.+.++++++.|++++||+=+.    ..++|.++++.|
T Consensus       190 ----~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G  265 (269)
T PF06800_consen  190 ----FFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG  265 (269)
T ss_pred             ----ccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence                111112211111122344555444444555555555566788999999999999999775    467788888877


Q ss_pred             hh
Q 019845          300 LH  301 (335)
Q Consensus       300 v~  301 (335)
                      ..
T Consensus       266 ~i  267 (269)
T PF06800_consen  266 AI  267 (269)
T ss_pred             hh
Confidence            54

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.63  E-value=1.4e-06  Score=78.29  Aligned_cols=129  Identities=14%  Similarity=-0.020  Sum_probs=90.1

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehh--HHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYA--TVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI   80 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~--~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~   80 (335)
                      .+++.++..+.++...+..|....+    .++.  +....+.....++..+.....++..  . .  ++++.......+.
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~--~~~~~~~~~~~~~  199 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKK----EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--Q-A--LSLQWGALLYLGL  199 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhc----CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--C-c--chHHHHHHHHHHH
Confidence            4567888999999999999988632    3322  2222334444443333333222211  1 1  2233322233344


Q ss_pred             H-HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845           81 I-YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT  140 (335)
Q Consensus        81 l-~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~  140 (335)
                      + ......++++++++.+++..+++.++.|+++++++++++||+++..|+.|..+.+.|++
T Consensus       200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            4 46788899999999999999999999999999999999999999999999999999873

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.59  E-value=4.4e-07  Score=70.72  Aligned_cols=129  Identities=16%  Similarity=0.278  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhh-hcccccccCCcccccccccchHHHHHHHH
Q 019845          163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMVVF  241 (335)
Q Consensus       163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (335)
                      ..+.+++++++++..++.|--+++.|++. . ..--......+....... .+++..           ...+...|..+.
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~-A-t~IRtiVi~~~l~~v~~~~g~~~~~-----------~~~~~k~~lfli   71 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDF-A-TTIRTIVILIFLLIVLLVTGNWQAG-----------GEIGPKSWLFLI   71 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccH-H-HHHHHHHHHHHHHHHHHhcCceecc-----------cccCcceehhhh
Confidence            46789999999999887776666544321 1 111122223332222222 222211           011222333322


Q ss_pred             H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845          242 N----LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  304 (335)
Q Consensus       242 ~----~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~  304 (335)
                      .    .+++-++..+.+|..++....+.+.+++++++++|++++||++|..+++|+.+|.+|..+..
T Consensus        72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            2    22333445566777777888888899999999999999999999999999999999976543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.54  E-value=3.5e-06  Score=69.37  Aligned_cols=139  Identities=17%  Similarity=0.254  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcC---CCcceehhHHHHHHHHHHHHHHHHHHH-HhhcCCCC--Ccccc-----chhhh
Q 019845            4 YFVATLLTILTSSQGILTTLSQSN---GGYKYDYATVPFLAEVFKLVVSSILLW-REWRMPSS--PKMTT-----EWRSV   72 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~---~~~~~~~~~~v~~~e~~~l~~~~~l~~-~~~~~~~~--~~~~~-----~~~~~   72 (335)
                      +++.+...+..+...+.+|....+   .++..++.+..........++..+... .|+.....  .....     ..+..
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            466788889999999999887533   346678887887777777777655543 33221000  00110     12233


Q ss_pred             hhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845           73 RLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS  142 (335)
Q Consensus        73 ~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv  142 (335)
                      ......+++....|...|..++++++.+++++...|.+.+.++++++++|+++..++.|+.+.+.|+..-
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            3456667788899999999999999999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.53  E-value=1.3e-06  Score=68.99  Aligned_cols=121  Identities=16%  Similarity=0.229  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH--HHHHHHHHHHHHHHH
Q 019845          172 LSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLL  249 (335)
Q Consensus       172 ~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~ai~g~~  249 (335)
                      ++|...++.|+..++.+ +. ....+....+.+ .++.....+..+. .+       .+....  .....++..+++..+
T Consensus         2 ~~a~~~~~~k~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKKIS-PL-SITFWRFLIAGI-LLILLLILGRKPF-KN-------LSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             eeeeHHHHHHHHhccCC-HH-HHHHHHHHHHHH-HHHHHHhhccccc-cC-------CChhhhhhhhHhhccceehHHHH
Confidence            56778889999887742 33 333343444444 2332222221110 00       111111  111122223455666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          250 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       250 ~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                      ..+.+++.+....+....++|+++.++++++++|++++.+++|..+++.|+.+.
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            778889999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.37  E-value=1.7e-05  Score=72.80  Aligned_cols=67  Identities=19%  Similarity=0.392  Sum_probs=61.5

Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      +++.+++.+.+.|+.+.|.+..+=+.....++.++++..++|||+++++|.|..+..+|..++...+
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            3567888999999999999999999999999999999999999999999999999999998765443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.34  E-value=2.7e-05  Score=62.33  Aligned_cols=122  Identities=13%  Similarity=0.024  Sum_probs=88.0

Q ss_pred             ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845            1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI   80 (335)
Q Consensus         1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~   80 (335)
                      |+.|++.++.++..+..=++.|+.-.+.+. .+....    +...       +.....    +     +..   ...--.
T Consensus         1 ~~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~----~~~~-------~~~~~~----p-----~~~---i~lgl~   56 (129)
T PRK02971          1 MMGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD----FIAA-------LLAFGL----A-----LRA---VLLGLA   56 (129)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH----HHHH-------HHHHhc----c-----HHH---HHHHHH
Confidence            678999999999999999999999532211 111110    1000       000000    0     000   112234


Q ss_pred             HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRL--FLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~--~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      +|.++..++..+++..|++.+.-+.+..+..+++.++.  ++||+++++||+|+.+.++|+.++..++
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            68899999999999999999999999998888888885  8999999999999999999999987643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.31  E-value=7.6e-06  Score=74.64  Aligned_cols=63  Identities=17%  Similarity=0.190  Sum_probs=58.3

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT  141 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i  141 (335)
                      ++...+.+.++++++++.|++......+..|++..+++++++||++++.|+.|..+.++|+.+
T Consensus       218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            344567888999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.31  E-value=2.1e-05  Score=72.34  Aligned_cols=131  Identities=12%  Similarity=0.066  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHH
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYL   83 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~   83 (335)
                      +++.++..+.++...+..|....+    +++.+..+..  ..... .+....++.. .   ...++.........++...
T Consensus       158 ~~~~l~aa~~~A~~~v~~k~~~~~----~~~~~~~~~~--~~~~l-~~~~~~~~~~-~---~~~~~~~~~~l~~~~~~t~  226 (295)
T PRK11689        158 YGLAFIGAFIWAAYCNVTRKYARG----KNGITLFFIL--TALAL-WIKYFLSPQP-A---MVFSLPAIIKLLLAAAAMG  226 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCC----CCchhHHHHH--HHHHH-HHHHHHhcCc-c---ccCCHHHHHHHHHHHHHHH
Confidence            456788888999999999887522    2222222211  11111 1111112111 1   1112222222223344456


Q ss_pred             HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845           84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK  145 (335)
Q Consensus        84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~  145 (335)
                      +...++++++++.|++..+++.+..|++.++++++++||+++..|+.|..+.+.|+.+....
T Consensus       227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            68889999999999999999999999999999999999999999999999999999887653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.27  E-value=3e-05  Score=73.06  Aligned_cols=64  Identities=16%  Similarity=0.075  Sum_probs=59.4

Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+...++++++++.+++.+++.....|++++++++++++|++++.|++|.++.+.|+.++.++.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            3567788899999999999999999999999999999999999999999999999999987643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.24  E-value=4.9e-05  Score=69.77  Aligned_cols=132  Identities=14%  Similarity=0.100  Sum_probs=87.3

Q ss_pred             HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-HH
Q 019845            5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-YL   83 (335)
Q Consensus         5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~~   83 (335)
                      ++.++..+.++...+..|....    ++++... ....++...+..+.......  .   ...++.........+++ -.
T Consensus       151 ll~l~aa~~~a~~~v~~r~~~~----~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~---~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        151 ALALGAGACWAIYILSGQRAGA----EHGPATV-AIGSLIAALIFVPIGALQAG--E---ALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc----cCCchHH-HHHHHHHHHHHHHHHHHccC--c---ccCCHHHHHHHHHHHHHHHH
Confidence            4567777888888888887752    2233322 22223332222222222211  0   11122221111223333 44


Q ss_pred             HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      ++..++++++++.+++.++++..++|++.++++++++||+++..|++|..+.+.|++......
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            677899999999999999999999999999999999999999999999999999998876543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.21  E-value=4.6e-05  Score=71.77  Aligned_cols=140  Identities=16%  Similarity=0.192  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCC---CcceehhHHHHHHHHHHHHHHHHHHH-HhhcCCCCC------cc-ccchhhh
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNG---GYKYDYATVPFLAEVFKLVVSSILLW-REWRMPSSP------KM-TTEWRSV   72 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~---~~~~~~~~~v~~~e~~~l~~~~~l~~-~~~~~~~~~------~~-~~~~~~~   72 (335)
                      .+..++..+.++...+..|....+.   +++++..+........+.++++++.. .|.......      .. ...+..+
T Consensus       196 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  275 (350)
T PTZ00343        196 FWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGII  275 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHH
Confidence            3556777888899999998764321   12455554444444555555544432 222100000      00 0011111


Q ss_pred             -hhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845           73 -RLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ  143 (335)
Q Consensus        73 -~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~  143 (335)
                       ......++.+...|.+.|.+++++++.++++....+|+++.++++++++|+++..|++|..+.+.|+.+..
T Consensus       276 l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        276 IFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence             12334566788999999999999999999999999999999999999999999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.21  E-value=1.1e-05  Score=74.36  Aligned_cols=140  Identities=15%  Similarity=0.119  Sum_probs=92.4

Q ss_pred             HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-cc-----cchhhhhh-hhH
Q 019845            5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPK-MT-----TEWRSVRL-FPI   77 (335)
Q Consensus         5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~-~~-----~~~~~~~~-~~i   77 (335)
                      ++.++..+.++...+..|....+  +++++.+..+.....+.+...+.....+....... ..     ........ ...
T Consensus       148 ~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (302)
T TIGR00817       148 LSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLV  225 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHH
Confidence            45666777788888888765432  24666666666555555544444322111000000 00     00011111 112


Q ss_pred             HHH-HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           78 PSI-IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        78 ~a~-l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+. .+...|.+.|.+++++++.++++....+|+++++++++++||+++..|++|..+.++|+.+.....
T Consensus       226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            222 455566788899999999999999999999999999999999999999999999999999887644

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.16  E-value=7.8e-05  Score=68.39  Aligned_cols=133  Identities=8%  Similarity=-0.014  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-H
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-Y   82 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~   82 (335)
                      .+..++..+.++...+..|.....  +  + .............+..+........ . . ...+.+........+++ .
T Consensus       152 ~l~~l~a~~~~a~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~i~~l~i~~s  223 (292)
T PRK11272        152 AILILIASASWAFGSVWSSRLPLP--V--G-MMAGAAEMLAAGVVLLIASLLSGER-L-T-ALPTLSGFLALGYLAVFGS  223 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC--c--c-hHHHHHHHHHHHHHHHHHHHHcCCc-c-c-ccCCHHHHHHHHHHHHHHH
Confidence            455667777888888877765321  1  1 1122222222222222222222110 0 0 11122222222233333 4


Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      .+...++++++++.+++..+++..+.|++.++++++++||+++..|+.|..+.+.|+.+...
T Consensus       224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999988765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.15  E-value=0.00018  Score=57.60  Aligned_cols=121  Identities=17%  Similarity=0.110  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF  241 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (335)
                      |.++++.+.++.+.+.+..|+-.++.+...  ....    . . .......                 +. ..+.+..+.
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~--~~~~----~-~-~~~~~~~-----------------~p-~~~i~lgl~   56 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLS--HAWD----F-I-AALLAFG-----------------LA-LRAVLLGLA   56 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCcc--chhH----H-H-HHHHHHh-----------------cc-HHHHHHHHH
Confidence            677888888888899999888766543211  0000    0 0 0000000                 00 013444455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845          242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY--LFNFKPTLQLFLGIIICMMSLHMYFAPPG  308 (335)
Q Consensus       242 ~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l--~fge~~t~~~~~G~~lVi~gv~ly~~~~~  308 (335)
                      ..+++..+..+++++.+........+...++..+.++.  +|||++|+.+++|.++|+.|+++.+++++
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            55666667778888888777766666666667777774  89999999999999999999998776544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.10  E-value=0.00013  Score=66.99  Aligned_cols=68  Identities=13%  Similarity=0.028  Sum_probs=61.5

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      ++...+...+++.++++.|++..+.+.+..|++..++++++++|+++..|+.|..+.++|+.++..++
T Consensus       220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            44455788899999999999999999999999999999999999999999999999999998876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.06  E-value=0.00016  Score=56.05  Aligned_cols=67  Identities=21%  Similarity=0.263  Sum_probs=57.5

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK  145 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~  145 (335)
                      -.+|.++..+...+++++|.+.+..+ .....+.+++.+++++||++++.|+.|+.+..+|+..+...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34567777788888999998777766 56899999999999999999999999999999999988653

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.93  E-value=0.015  Score=54.17  Aligned_cols=169  Identities=9%  Similarity=-0.086  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc-cchhhhhhhhHHHHHH
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMT-TEWRSVRLFPIPSIIY   82 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~i~a~l~   82 (335)
                      |+.+++..+.+++..+-.|..++-.=|.|+. ...++.-++.-.....+.  .+.  -....+ .+.+.+..-.+.+++-
T Consensus         9 ~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~-v~gi~~wl~~~~~~g~~~--~~~--f~~~~~~~~~~~~~~~~l~G~~W   83 (345)
T PRK13499          9 IIWHLIGGASSGSFYAPFKKVKKWSWETMWS-VGGIFSWLILPWLIAALL--LPD--FWAYYSSFSGSTLLPVFLFGALW   83 (345)
T ss_pred             HHHHHHHHHHhhcccccccccCCCchhHHHH-HHHHHHHHHHHHHHHHHH--hhh--HHHHHHhcCHHHHHHHHHHHHHH
Confidence            5667788888888888888865322233433 122222222111001111  110  000111 2234444455678888


Q ss_pred             HHHhHHHHHHHhcCChhHHHH-hhhhHHHHHHHHHHHHhcccc---cH----HHHHHHHHHHHHHhhhcccCCCccccC-
Q 019845           83 LVHNNVQFATLTYVDTSTYQI-MGNLKIVTTGILFRLFLRRRL---ST----LQWMAIVLLAVGTTTSQVKGCGEALCD-  153 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~l-l~~~~pl~~alls~~~l~er~---~~----~q~~~i~l~~~Gv~iv~~~~~~~~~~~-  153 (335)
                      .+.|..++.+++++..+...- -..++.+..+++..++++|=-   +.    .-..|+++.++|+.+....+...++.+ 
T Consensus        84 ~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~  163 (345)
T PRK13499         84 GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMG  163 (345)
T ss_pred             HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence            999999999999998876654 467788889999999888533   33    346778888999999887332111100 


Q ss_pred             ---cccccchhHHHHHHHHHHHHHHHH
Q 019845          154 ---SLFAAPIQGYLLGVLSACLSALAG  177 (335)
Q Consensus       154 ---~~~~~~~~G~~l~l~aal~~a~~~  177 (335)
                         ....+.--|+++.+++.+.+++.+
T Consensus       164 ~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        164 IKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             cccccccchHhHHHHHHHHHHHHHHHH
Confidence               111233469999999999988877

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.93  E-value=0.00039  Score=63.97  Aligned_cols=64  Identities=22%  Similarity=0.140  Sum_probs=59.1

Q ss_pred             HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+...+++.++++++++..+.+....|++.+++++++++|+++..||+|..+.++|+.+...+.
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            4677788999999999999999999999999999999999999999999999999999876544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.88  E-value=0.00015  Score=57.10  Aligned_cols=71  Identities=8%  Similarity=0.072  Sum_probs=62.3

Q ss_pred             hHHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           76 PIPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        76 ~i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+.-.+|..+..+...+++++|.+.+..+ .....+.+++.+++++||++++.|+.++.+.++|+..+...+
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34456788899999999999999887777 479999999999999999999999999999999999886543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.82  E-value=0.00034  Score=55.03  Aligned_cols=67  Identities=13%  Similarity=0.217  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          241 FNLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       241 ~~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      ...++.-.+.+.++|+.+ ++.-+..+.+..+.+++.|+++|||++|+.+++|.++++.|+..-+...
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            334445556667777766 3333445567889999999999999999999999999999998776544

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.76  E-value=0.00027  Score=55.03  Aligned_cols=61  Identities=13%  Similarity=0.138  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          243 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                      .++...+...++++.+........++.++++.++|+++|||++|+.+++|.++++.|+.+-
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            3445566677888888777766667899999999999999999999999999999998654

>TIGR00688 rarD rarD protein

Probab=97.74  E-value=0.0022  Score=57.56  Aligned_cols=135  Identities=12%  Similarity=0.144  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHHHH-
Q 019845          162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTWMV-  239 (335)
Q Consensus       162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (335)
                      |..++++++++++...+..|. ..+  .+.......-..++.++.++..... +.+...++-    ...+......... 
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~   75 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LKP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLL   75 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hcc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHH
Confidence            778899999999999999886 332  2333333333445554443322211 111000000    0000111110111 


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          240 -VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       240 -i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                       .+..+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.+.|+.+-
T Consensus        76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence             1112334455566778888888888889999999999999999999999999999999997644

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.72  E-value=0.00035  Score=53.66  Aligned_cols=67  Identities=13%  Similarity=0.130  Sum_probs=58.3

Q ss_pred             HHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845           77 IPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ  143 (335)
Q Consensus        77 i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~  143 (335)
                      +.-.+|..+..+...+++.+|.+++..+ .....+.+++.+++++||++++.|+.++.+...|++...
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3345788899999999999998665554 559999999999999999999999999999999998874

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.71  E-value=0.00065  Score=62.30  Aligned_cols=69  Identities=13%  Similarity=0.218  Sum_probs=63.1

Q ss_pred             hHHHHHHHHHhHHHHHHHh-cCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHhhhcc
Q 019845           76 PIPSIIYLVHNNVQFATLT-YVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQW----MAIVLLAVGTTTSQV  144 (335)
Q Consensus        76 ~i~a~l~~~~~~l~f~al~-~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~----~~i~l~~~Gv~iv~~  144 (335)
                      .+.+++..+.+.+++.+.+ +.+++.+.++.+..|+..++++++++||+.+++|+    .|.++...|+.++..
T Consensus       215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            3467777889999999999 99999999999999999999999999999999999    999999999987753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.66  E-value=0.00044  Score=53.46  Aligned_cols=67  Identities=19%  Similarity=0.255  Sum_probs=57.8

Q ss_pred             HHHHHHHHHhHHHHHHHhcCChhHHH-HhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845           77 IPSIIYLVHNNVQFATLTYVDTSTYQ-IMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ  143 (335)
Q Consensus        77 i~a~l~~~~~~l~f~al~~~~~~~~~-ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~  143 (335)
                      +.-.+|..+..+.-.+++++|.+++. +-.....+.+++.+++++||++++.|+.++.+.+.|+....
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34456788889999999999986655 45668899999999999999999999999999999998763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.63  E-value=0.00054  Score=52.25  Aligned_cols=69  Identities=17%  Similarity=0.244  Sum_probs=59.6

Q ss_pred             hHHHHHHHHHhHHHHHHHhcCChhH-HHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845           76 PIPSIIYLVHNNVQFATLTYVDTST-YQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        76 ~i~a~l~~~~~~l~f~al~~~~~~~-~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      .+.-..+.++..+.-.+++++|.++ |.+-.....+-+++.+++++||+++..|++++.+..+|++....
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3445577888889999999999855 55668889999999999999999999999999999999988754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.63  E-value=0.001  Score=61.33  Aligned_cols=142  Identities=18%  Similarity=0.187  Sum_probs=100.8

Q ss_pred             hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHH--hhcCCCCCcc-ccchhhhhhhhHHH
Q 019845            3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWR--EWRMPSSPKM-TTEWRSVRLFPIPS   79 (335)
Q Consensus         3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~--~~~~~~~~~~-~~~~~~~~~~~i~a   79 (335)
                      .++++++..+..+...+..+....+  ++.++.+.++...+.++.+.......  .+...+..+. .++........+.+
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~--~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s  232 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKK--YGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS  232 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH
Confidence            3567777888888888877665422  44566788999999888877655543  2221111111 11111122223445


Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      +.........+.-.+..++.+.+++..++-+++.+++..++++++++.||.|+.+.+.|..+-..+.
T Consensus       233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            5556666677778899999999999999999999999999999999999999999999998876543

; GO: 0055085 transmembrane transport

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.60  E-value=0.0011  Score=59.48  Aligned_cols=119  Identities=9%  Similarity=0.095  Sum_probs=86.8

Q ss_pred             hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845            2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l   81 (335)
                      |.+..+++..+.......+.|+.+.+      . ..+++-+.++.+++..++....+  +..+.+..|++    .+.+++
T Consensus       138 kgi~~Ll~stigy~~Y~~~~~~~~~~------~-~~~~lPqaiGm~i~a~i~~~~~~--~~~~~k~~~~n----il~G~~  204 (269)
T PF06800_consen  138 KGILALLISTIGYWIYSVIPKAFHVS------G-WSAFLPQAIGMLIGAFIFNLFSK--KPFFEKKSWKN----ILTGLI  204 (269)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCC------h-hHhHHHHHHHHHHHHHHHhhccc--ccccccchHHh----hHHHHH
Confidence            45667777777777777777775432      2 24445566666666555432111  11122334555    467999


Q ss_pred             HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHH
Q 019845           82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIV  133 (335)
Q Consensus        82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~  133 (335)
                      +.+.|.+++.+.+....++...+.|+.++..++.+.+++||+=+++++..+.
T Consensus       205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999886544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.53  E-value=0.0013  Score=50.95  Aligned_cols=65  Identities=14%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      .++.-.+.+.++|+.+ ++.-+..+.+..+.+++.|+++|||++|+.+++|+++++.|+..-+...
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3444455566777665 3333445567889999999999999999999999999999998776543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.52  E-value=0.0041  Score=56.20  Aligned_cols=71  Identities=17%  Similarity=0.219  Sum_probs=63.0

Q ss_pred             hhHHHHHHH-HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845           75 FPIPSIIYL-VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK  145 (335)
Q Consensus        75 ~~i~a~l~~-~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~  145 (335)
                      ....+++.. +...+++.+++..+++..+.+..+.|++.+++++++++|+++.+++.|..+...|+.+....
T Consensus       217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            344455544 58899999999999999999999999999999999999999999999999999999988654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.38  E-value=0.0022  Score=50.04  Aligned_cols=62  Identities=18%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          245 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       245 i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      .......+..++.++ .......+.|+++.++|+++++|+++..+++|.++++.|+.+-..++
T Consensus        47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            344555677788885 55577788999999999999999999999999999999987765543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.25  E-value=0.018  Score=53.64  Aligned_cols=63  Identities=16%  Similarity=0.297  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          245 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       245 i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      .+..+....++|.+-.........+++++.++|++++++++++.+++|+.+++.|+.+.....
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            456666677888887777888889999999999999999999999999999999987655443

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.22  E-value=0.0042  Score=47.44  Aligned_cols=65  Identities=18%  Similarity=0.193  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          242 NLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       242 ~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      ...+.-.+.+..+|+.+ .+.-+..+....+.+.+.|+++|||+.|+..++|..+++.|+..-+..
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            33445556677788765 344466777888999999999999999999999999999998766543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.17  E-value=0.0057  Score=47.01  Aligned_cols=63  Identities=11%  Similarity=0.112  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845          243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA  305 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~  305 (335)
                      .++.-.+.+..+|..+ ++.-+..+.+..+.+.+.|+++|||++|+.+++|.++++.|+..-+.
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            3445555667777665 44445666788899999999999999999999999999999877553

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.16  E-value=0.0068  Score=55.76  Aligned_cols=117  Identities=15%  Similarity=0.140  Sum_probs=80.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHH
Q 019845          158 APIQGYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT  236 (335)
Q Consensus       158 ~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (335)
                      +...|..+.+.++++.+.+..++||-.++.+. +....                     .    ++   .+...  +...
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~---------------------~----~~---~~~l~--~~~W   53 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG---------------------S----GG---RSYLR--RPLW   53 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---------------------c----hh---hHHHh--hHHH
Confidence            34689999999999999999999987665422 10000                     0    00   00000  1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845          237 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  304 (335)
Q Consensus       237 ~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~  304 (335)
                      |..+...+++...-...+.+++....++...++.+++.+++..+++|+++...++|.++++.|..+..
T Consensus        54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            32333334454444456777888888999999999999999999999999999999999999975443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.12  E-value=0.0021  Score=48.36  Aligned_cols=55  Identities=22%  Similarity=0.208  Sum_probs=34.6

Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHH-hhhhHHHHHHHHHHHHhcccccHHHHHHHHH
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQI-MGNLKIVTTGILFRLFLRRRLSTLQWMAIVL  134 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~l-l~~~~pl~~alls~~~l~er~~~~q~~~i~l  134 (335)
                      .+|..+..+...+++++|.+.+.- ......+.+++.+.+++||+++..||.++.+
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            478889999999999999977755 4679999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.07  E-value=0.0079  Score=46.50  Aligned_cols=62  Identities=13%  Similarity=0.134  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845          243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF  304 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~  304 (335)
                      .++.-.+.+..+|+.+ ++.-+..+....+.+.+.|+++|||++|+.+++|.++++.|+..-+
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3445556667777765 3444556677889999999999999999999999999999987643

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.93  E-value=0.0087  Score=54.39  Aligned_cols=68  Identities=26%  Similarity=0.447  Sum_probs=62.2

Q ss_pred             HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845           80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC  147 (335)
Q Consensus        80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~  147 (335)
                      +.+.++..+.|.|+.+-|.+..+-+.+++.+..++++..+||||++....+|..+.++|-.++.....
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP  139 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP  139 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence            35778999999999999999999999999999999999999999999999999999999987765443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.89  E-value=0.0028  Score=49.19  Aligned_cols=68  Identities=21%  Similarity=0.272  Sum_probs=60.6

Q ss_pred             hhHHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845           75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS  142 (335)
Q Consensus        75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv  142 (335)
                      |.+|-+++-.+...+|+.++..|.+.+.-+ +++.-++|++.++++.+|..+++.|+|+.+...|+.+.
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            678888999999999999999999888877 58999999999988777888888999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.67  E-value=0.0039  Score=57.39  Aligned_cols=140  Identities=12%  Similarity=0.114  Sum_probs=99.2

Q ss_pred             HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHH-HHHH-HhhcCCCC-CccccchhhhhhhhHHHHH
Q 019845            5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSS-ILLW-REWRMPSS-PKMTTEWRSVRLFPIPSII   81 (335)
Q Consensus         5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~-~l~~-~~~~~~~~-~~~~~~~~~~~~~~i~a~l   81 (335)
                      +......+..+.+-++.|......+++.+..+..-...-+.++..+ +... .++..... .....++. ......-+++
T Consensus       166 i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~  244 (316)
T KOG1441|consen  166 ISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVL  244 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHH
Confidence            3455667778888888888876555777776665554444444443 4332 23221100 00011122 2233444588


Q ss_pred             HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845           82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK  145 (335)
Q Consensus        82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~  145 (335)
                      +...|...|..+.++++-++++....|=.++...+++++++++++.|..|.++.++|+..-...
T Consensus       245 ~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  245 AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999999999987543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.62  E-value=0.069  Score=47.10  Aligned_cols=57  Identities=18%  Similarity=0.343  Sum_probs=52.2

Q ss_pred             HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845           84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT  140 (335)
Q Consensus        84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~  140 (335)
                      +-..+...+++.+|..++.++.+..|.+.++..+++|+|++|..||+++.+..++.+
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            445677889999999999999999999999999999999999999999988887775

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.34  E-value=0.15  Score=45.94  Aligned_cols=131  Identities=15%  Similarity=0.068  Sum_probs=90.4

Q ss_pred             HHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHH-HHhhcCCCCCccccchhhhhhhhHHHHHHHHHh
Q 019845            8 TLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL-WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHN   86 (335)
Q Consensus         8 ~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~   86 (335)
                      +.+++.++..+.+-|..+.      +..+...+..+.-+..++..+ +.+..  ...-...+.+...+....|..-.+--
T Consensus       154 l~la~sf~~Ygl~RK~~~v------~a~~g~~lE~l~l~p~al~yl~~l~~~--~~~~~~~~~~~~~LLv~aG~vTavpL  225 (293)
T COG2962         154 LALALSFGLYGLLRKKLKV------DALTGLTLETLLLLPVALIYLLFLADS--GQFLQQNANSLWLLLVLAGLVTAVPL  225 (293)
T ss_pred             HHHHHHHHHHHHHHHhcCC------chHHhHHHHHHHHhHHHHHHHHHHhcC--chhhhcCCchHHHHHHHhhHHHHHHH
Confidence            4556677777777777753      333344443333333443333 33322  10001123344444555666777888


Q ss_pred             HHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           87 NVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        87 ~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .++-.|-+.+|.++.-++.+..|...-+++++++||+++..|+.+-.+.-+|+++...++
T Consensus       226 ~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         226 LLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            888899999999999999999999999999999999999999999999999998886543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.16  E-value=0.054  Score=48.32  Aligned_cols=68  Identities=13%  Similarity=0.139  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845          243 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML  310 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~  310 (335)
                      .++.+.+....+++.|+.+-.......+++++++++++++.+++..||++..+...|+.+.+.++...
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            35566666678899999998899999999999999999999999999999999999999888776554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.15  E-value=0.00044  Score=60.26  Aligned_cols=268  Identities=13%  Similarity=0.147  Sum_probs=147.2

Q ss_pred             ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845            1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI   80 (335)
Q Consensus         1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~   80 (335)
                      |.+++..++=.+.|++.++....-   ++.++.+.--+-+.   .+.+++.+++-..       ...+++.+..-.+.++
T Consensus         1 ~~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~G---ALifaiiv~~~~~-------p~~T~~~~iv~~isG~   67 (288)
T COG4975           1 MMDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLG---ALIFAIIVFLFVS-------PELTLTIFIVGFISGA   67 (288)
T ss_pred             ChhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHH---HHHHHHHHheeec-------CccchhhHHHHHHhhh
Confidence            678888889999999988765322   34445444322222   2223333332211       1112444444467788


Q ss_pred             HHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHhhhcccCCCccccCcc
Q 019845           81 IYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQW----MAIVLLAVGTTTSQVKGCGEALCDSL  155 (335)
Q Consensus        81 l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~----~~i~l~~~Gv~iv~~~~~~~~~~~~~  155 (335)
                      +-......+|-|.+++..+.+.=+ ..++.+-+.+++++.++|--+..|.    .++++...|+.+....+..+.+.|+ 
T Consensus        68 ~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~-  146 (288)
T COG4975          68 FWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEEN-  146 (288)
T ss_pred             HhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccC-
Confidence            888999999999999988766644 4567788899999999998888774    4677788888887766543322111 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845          156 FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS-LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI  234 (335)
Q Consensus       156 ~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (335)
                      .++.-.|....+.+.+.+-.+.+..+.. +-++.+ +.-|.    . |.++..+..-..+ .+.         .++.   
T Consensus       147 ~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~v~g~saiLPqA----i-GMv~~ali~~~~~-~~~---------~~~K---  207 (288)
T COG4975         147 PSNLKKGIVILLISTLGYVGYVVLFQLF-DVDGLSAILPQA----I-GMVIGALILGFFK-MEK---------RFNK---  207 (288)
T ss_pred             hHhhhhheeeeeeeccceeeeEeeeccc-cccchhhhhHHH----H-HHHHHHHHHhhcc-ccc---------chHH---
Confidence            1122246666566666554444433322 212212 22221    2 2222222111111 000         1122   


Q ss_pred             HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH----HHHHHHHHHHHhh
Q 019845          235 TTWMVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQ----LFLGIIICMMSLH  301 (335)
Q Consensus       235 ~~~~~i---~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~----~~~G~~lVi~gv~  301 (335)
                      .+|.-+   +.-+++++.+-+.-+..+.-+.-..+.+..+++++-|+++++|+=|..    .++|..+++.|..
T Consensus       208 ~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai  281 (288)
T COG4975         208 YTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAI  281 (288)
T ss_pred             HHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhh
Confidence            223222   223445553333323222211112334567889999999999998864    4567777776653

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.15  E-value=0.032  Score=41.90  Aligned_cols=54  Identities=19%  Similarity=0.253  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Q 019845          243 LGSTGLLVSWLMKYADNIIK-VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC  296 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~a~~~-~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lV  296 (335)
                      .+++-.+.+..+|+.+-... ...+....+.+.+.|+++|||++|+.+++|.++|
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34444566677887764433 4456678899999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00803 nst UDP-galactose transporter

Probab=96.01  E-value=0.071  Score=46.67  Aligned_cols=65  Identities=14%  Similarity=0.209  Sum_probs=58.6

Q ss_pred             HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845           77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT  141 (335)
Q Consensus        77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i  141 (335)
                      ...++..+...+..+.++|.++.+......++++++++++.++++|+++..+|.|+.+.+.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            44466778888899999999999999999999999999999999999999999999999988643

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.95  E-value=0.69  Score=37.40  Aligned_cols=131  Identities=15%  Similarity=0.142  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHHH
Q 019845          163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN  242 (335)
Q Consensus       163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  242 (335)
                      .++.+.+..+-+++...+-++.++-+++ +.........+.+...+.....+.++.        ....+.+++.|+.-+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~-~~as~i~~~~G~i~~~i~~~~~~~~~~--------~~~~~~p~w~~lGG~l   73 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSP-LVASFISFGVGFILLLIILLITGRPSL--------ASLSSVPWWAYLGGLL   73 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcc-HHHHHHHHHHHHHHHHHHHHHhccccc--------chhccCChHHhccHHH
Confidence            3456667777778888888877765433 333444445566666555544332211        1123445555543222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hh---CCCccHHHHHHHHHHHHHhhh
Q 019845          243 LGSTGLLVSWLMKYADNIIKVYST-SMAMLLTMVLSVY-LF---NFKPTLQLFLGIIICMMSLHM  302 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~a~~~~~~~-~~~~v~~~l~s~l-~f---ge~~t~~~~~G~~lVi~gv~l  302 (335)
                      .++.-....+...+.++....... .-+.+.+.+++.+ +|   .+++++..++|.++++.|+.+
T Consensus        74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            222223344555666654444433 3345566677765 33   467899999999999999764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.50  E-value=0.042  Score=42.66  Aligned_cols=60  Identities=18%  Similarity=0.218  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845          243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM  302 (335)
Q Consensus       243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l  302 (335)
                      +..+.....+.+...| +.....+++++-+++.+.++++.+|..+...++|+.+|+.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3445555556667666 34445567889999999999888888899999999999999754

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.33  E-value=2.3  Score=34.34  Aligned_cols=65  Identities=8%  Similarity=0.122  Sum_probs=46.5

Q ss_pred             HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhH-HHHHHHHHHH----HhcccccHHHHHHHHHHHHHHhh
Q 019845           77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLK-IVTTGILFRL----FLRRRLSTLQWMAIVLLAVGTTT  141 (335)
Q Consensus        77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~-pl~~alls~~----~l~er~~~~q~~~i~l~~~Gv~i  141 (335)
                      ..+++-...-.+..+..+.+.++...++.-+. .+...++-.+    .-|++++++|..|+.+..+|+.+
T Consensus        69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            34555556666666788888887776665544 4444555554    46799999999999999999863

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.70  E-value=3.3  Score=33.87  Aligned_cols=136  Identities=13%  Similarity=0.176  Sum_probs=72.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHH
Q 019845          161 QGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV  240 (335)
Q Consensus       161 ~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  240 (335)
                      ...+..+.+..+...++..+-++.+..+.+... ...-...|+...+......+.....       ......+++.|..-
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~A-s~isf~vGt~~L~~l~l~~~~~~~~-------a~~~~~pwW~~~GG   76 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLA-SLISFLVGTVLLLILLLIKQGHPGL-------AAVASAPWWAWIGG   76 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHhcCCCch-------hhccCCchHHHHcc
Confidence            345666777777788888888877765534322 2222334555544443333321110       11234455655432


Q ss_pred             HHHHHHHHHHH---HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-hC---CCccHHHHHHHHHHHHHhhhccCCC
Q 019845          241 FNLGSTGLLVS---WLMKYAD-NIIKVYSTSMAMLLTMVLSVYL-FN---FKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       241 ~~~ai~g~~~~---~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~-fg---e~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                         .+|...+.   ......+ +........-+.+.+.+++-+= ||   .+++...++|+++++.|+++.+..+
T Consensus        77 ---~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          77 ---LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             ---chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence               22222222   2222233 3333334444566667776553 33   5689999999999999977665543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.96  E-value=4  Score=38.29  Aligned_cols=75  Identities=5%  Similarity=0.041  Sum_probs=53.8

Q ss_pred             hhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHH----HhhhhHHHHHHHHHHHHhccccc--H----HHHHHHHHHHHH
Q 019845           69 WRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQ----IMGNLKIVTTGILFRLFLRRRLS--T----LQWMAIVLLAVG  138 (335)
Q Consensus        69 ~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~----ll~~~~pl~~alls~~~l~er~~--~----~q~~~i~l~~~G  138 (335)
                      +++...-.+.+++...+|..++.+-+.++.+...    +-.|+..++.++.+. ++||+=+  +    .-+.++++..+|
T Consensus       257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g  335 (345)
T PRK13499        257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA  335 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence            5555445677888899999999998877544333    444888888888877 5999877  3    346677777777


Q ss_pred             Hhhhcc
Q 019845          139 TTTSQV  144 (335)
Q Consensus       139 v~iv~~  144 (335)
                      ..++..
T Consensus       336 ~~lig~  341 (345)
T PRK13499        336 ANIVGL  341 (345)
T ss_pred             HHHHhh
Confidence            777654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=92.68  E-value=0.048  Score=47.88  Aligned_cols=91  Identities=16%  Similarity=0.223  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHH
Q 019845           37 VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILF  116 (335)
Q Consensus        37 ~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls  116 (335)
                      ..++-+.++++++...+-..++  .+++.+..|++    .+|++.....|..++.+-+....++.--++|+..+...+-.
T Consensus       180 saiLPqAiGMv~~ali~~~~~~--~~~~~K~t~~n----ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGG  253 (288)
T COG4975         180 SAILPQAIGMVIGALILGFFKM--EKRFNKYTWLN----IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGG  253 (288)
T ss_pred             hhhhHHHHHHHHHHHHHhhccc--ccchHHHHHHH----HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecce
Confidence            3455566777777666533321  11223334444    58899999999999999999999999999999999999999


Q ss_pred             HHHhcccccHHHHHHHH
Q 019845          117 RLFLRRRLSTLQWMAIV  133 (335)
Q Consensus       117 ~~~l~er~~~~q~~~i~  133 (335)
                      .++||||=+++||..+.
T Consensus       254 Il~L~ekKtkkEm~~v~  270 (288)
T COG4975         254 ILFLGEKKTKKEMVYVI  270 (288)
T ss_pred             EEEEeccCchhhhhhhh
Confidence            99999999999987554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=92.67  E-value=2.1  Score=40.19  Aligned_cols=138  Identities=14%  Similarity=0.074  Sum_probs=89.2

Q ss_pred             HHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHH---HHHHHHHHhhcCCCCCcc-ccchhhhhhhhHHHHH
Q 019845            6 VATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLV---VSSILLWREWRMPSSPKM-TTEWRSVRLFPIPSII   81 (335)
Q Consensus         6 ~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~---~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~i~a~l   81 (335)
                      +.++..+..+....+.|.-..++|++.+...  |+ .++++.   +.-+.++.-... ..++. .++-.++......++.
T Consensus       251 laL~sA~~YavY~vllk~~~~~eg~rvdi~l--ff-GfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~~li  326 (416)
T KOG2765|consen  251 LALLSALLYAVYTVLLKRKIGDEGERVDIQL--FF-GFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFNNLI  326 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccHHH--HH-HHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHhhHH
Confidence            3456667777788888877666556665542  22 222222   211111110000 01111 1111233223344444


Q ss_pred             -HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845           82 -YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC  147 (335)
Q Consensus        82 -~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~  147 (335)
                       .+++..++-+|.-.+++-+.++-...+++..++.-.++-++++++.+++|.+..++|-.++..++.
T Consensus       327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence             558999999999999999999999999999998888888999999999999999999998876543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.50  E-value=0.63  Score=40.41  Aligned_cols=112  Identities=12%  Similarity=0.125  Sum_probs=80.2

Q ss_pred             eehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchh--hhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHH
Q 019845           32 YDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWR--SVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKI  109 (335)
Q Consensus        32 ~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~p  109 (335)
                      +.....||-.+++.+-+.+.+-+....+.. .....+.+  .+..+.+.+++-+.-..+.-|..+.++.++++++...+-
T Consensus       183 f~d~dtmfYnNllslPiL~~~s~~~edws~-~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK  261 (309)
T COG5070         183 FKDFDTMFYNNLLSLPILLSFSFLFEDWSP-GNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK  261 (309)
T ss_pred             cchhhHHHHhhhHHHHHHHHHHHHhccCCc-chhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence            444567788877776654333222111111 11111222  233567888888888888889999999999999999999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845          110 VTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus       110 l~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      +..++-+.++++++.++....++++++...++...
T Consensus       262 lp~alaGlvffdap~nf~si~sillGflsg~iYav  296 (309)
T COG5070         262 LPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV  296 (309)
T ss_pred             ChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999877766544

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=92.49  E-value=1.2  Score=39.97  Aligned_cols=62  Identities=16%  Similarity=0.262  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HhCCCc-----cHHHHHHHHHHHHHhhhccC
Q 019845          244 GSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVY-LFNFKP-----TLQLFLGIIICMMSLHMYFA  305 (335)
Q Consensus       244 ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l-~fge~~-----t~~~~~G~~lVi~gv~ly~~  305 (335)
                      +.++.+.-.++|..+ ++-..+......+..+..|-+ +||+++     ++.-.+|+++++.|..+|..
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence            445554445566554 344445566677777777744 676554     45788999999999887764

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.37  E-value=0.11  Score=47.50  Aligned_cols=72  Identities=11%  Similarity=0.220  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          235 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       235 ~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      ..|..++..++|-..-...+-+++++..++..+++.+.+++++..+++|++++.-.+|+++.+.|..+-...
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence            345556666666655445667789999999999999999999999999999999999999999996544433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.98  E-value=1.2  Score=40.45  Aligned_cols=111  Identities=15%  Similarity=0.199  Sum_probs=79.5

Q ss_pred             CcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCC----CccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHh
Q 019845           29 GYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS----PKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIM  104 (335)
Q Consensus        29 ~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll  104 (335)
                      ++..+....|+--++...+.+..-+.-.+.....    .+-++-++|+.++   +.+.+++....|+-++.-.+-+.+.+
T Consensus       197 ~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~---s~~gavGQ~FI~~TI~~FGslt~t~I  273 (327)
T KOG1581|consen  197 KYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY---STCGAVGQLFIFYTIERFGSLTFTTI  273 (327)
T ss_pred             cCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH---HHhhhhhhheehhhHhhcccHHHHHH
Confidence            4556667777777777766664333222221111    1112235565443   56777888888889988888888999


Q ss_pred             hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845          105 GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS  142 (335)
Q Consensus       105 ~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv  142 (335)
                      .-++=++..+++.++.+++++..||.|+.+.|.|...=
T Consensus       274 ~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  274 MTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             HHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            99999999999999999999999999999988888653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.43  E-value=0.44  Score=41.68  Aligned_cols=70  Identities=23%  Similarity=0.261  Sum_probs=59.2

Q ss_pred             HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      ..++...+...+.|.-..+..|-+-+++..+.-.||.+.|+++++..++.+||+|..+.|.|...=...|
T Consensus       246 l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  246 LLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             HHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            3455666777888888888888888999999999999999999999999999999999999987644433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=91.09  E-value=0.71  Score=41.25  Aligned_cols=76  Identities=14%  Similarity=0.149  Sum_probs=63.6

Q ss_pred             cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845           65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT  140 (335)
Q Consensus        65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~  140 (335)
                      .++.+|+..++...|+..+++..+.-.|+|-=-++-.++..++..++..+.-.+++||-.+++.|.|.++.....+
T Consensus       246 lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v  321 (346)
T KOG4510|consen  246 LPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV  321 (346)
T ss_pred             cCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence            3444565556667788888999999999999999999999999999999999999999999999998766544443

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.07  E-value=2.1  Score=39.16  Aligned_cols=141  Identities=13%  Similarity=0.087  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchh---hhhhhhHHHH
Q 019845            4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWR---SVRLFPIPSI   80 (335)
Q Consensus         4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~i~a~   80 (335)
                      |.....-++..+...+.+|..-..  ...+....++...++.+.......+..+...........|.   -+..+.+.++
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~--~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDS--ANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc--ccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            445555566666666666655322  22344456666666666655444332222110000011122   2234567777


Q ss_pred             HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      +-++-+.+.++..++.|+.++++......+.+.+-..++.+++.++....|+.++++|-++-+...
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            888899999999999999999999988888888888888899999999999999999988776543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=86.32  E-value=3.5  Score=37.22  Aligned_cols=61  Identities=13%  Similarity=0.099  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845          246 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP  306 (335)
Q Consensus       246 ~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~  306 (335)
                      +..++...+.+.++..-.+.--..+++..+++..+++.+++..+|+|+..|.+|+.+....
T Consensus        99 gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   99 GSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             hhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            3444444455555444444445567899999999999999999999999999998765443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=85.84  E-value=11  Score=35.14  Aligned_cols=134  Identities=14%  Similarity=0.196  Sum_probs=73.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH--HHHHHHHHHHHH---hhhcccccccCCcccccccccch
Q 019845          159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQL--YTFGAIFNMFRL---LLDDFRGGFEKGPWWQRLFDGYN  233 (335)
Q Consensus       159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  233 (335)
                      .+.|+++..+++++++...+=.||. |+-  + |+ ++|+  .+++.++.....   ...|..+          .....+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkv-k~W--s-WE-s~Wlv~gi~swli~P~~~a~l~ip~~~~----------i~~~~~   69 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKV-KGW--S-WE-SYWLVQGIFSWLIVPWLWALLAIPDFFS----------IYSATP   69 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhc-CCc--c-HH-HHHHHHHHHHHHHHHHHHHHHhCCcHHH----------HHHhCC
Confidence            4679999999999987776656653 332  1 22 2232  122332222111   1112211          111222


Q ss_pred             H--H--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-------CccHHHHHHHHHHHHHhh
Q 019845          234 I--T--TWMVVFNLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNF-------KPTLQLFLGIIICMMSLH  301 (335)
Q Consensus       234 ~--~--~~~~i~~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge-------~~t~~~~~G~~lVi~gv~  301 (335)
                      .  .  .++.-+.-+++++.....+||.+ +.-.+++.-+..++.+++--++.|+       +-....++|.++++.|+.
T Consensus        70 ~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa  149 (344)
T PF06379_consen   70 ASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA  149 (344)
T ss_pred             hhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence            1  1  11122334678888889999987 4444555555666666665555332       223478899999999988


Q ss_pred             hccCCC
Q 019845          302 MYFAPP  307 (335)
Q Consensus       302 ly~~~~  307 (335)
                      +..+.-
T Consensus       150 i~g~AG  155 (344)
T PF06379_consen  150 ICGKAG  155 (344)
T ss_pred             HHhHHH
Confidence            776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=84.55  E-value=21  Score=29.25  Aligned_cols=53  Identities=11%  Similarity=0.132  Sum_probs=35.8

Q ss_pred             HHhcCChhH-HHHhhhhHHHHHHHHHHHHh----cccccHHHHHHHHHHHHHHhhhcc
Q 019845           92 TLTYVDTST-YQIMGNLKIVTTGILFRLFL----RRRLSTLQWMAIVLLAVGTTTSQV  144 (335)
Q Consensus        92 al~~~~~~~-~~ll~~~~pl~~alls~~~l----~er~~~~q~~~i~l~~~Gv~iv~~  144 (335)
                      ..+.+-+++ ..+....+.+.-.++-.+=+    ++++++.++.++++..+|+.++..
T Consensus        89 l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          89 LAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            555555544 44445566666665544433    489999999999999999766654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=81.95  E-value=36  Score=31.33  Aligned_cols=75  Identities=23%  Similarity=0.383  Sum_probs=63.9

Q ss_pred             hhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845           69 WRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ  143 (335)
Q Consensus        69 ~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~  143 (335)
                      +|.+.....++.+-+.--...|.-+..++.-+.++..-.+-+.+.+++..+++++++...|.|..+...|+..-.
T Consensus       240 ~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  240 LRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            455555566677766677777778888999999999999999999999999999999999999999999999873

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=80.74  E-value=3.9  Score=31.11  Aligned_cols=35  Identities=6%  Similarity=0.145  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845          269 AMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY  303 (335)
Q Consensus       269 ~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly  303 (335)
                      +..+-+.+++++++|++++.++.|.++++++++..
T Consensus        72 tL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   72 TLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             hhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            34444567788999999999999999999988653

>PRK02237 hypothetical protein; Provisional

Probab=80.40  E-value=3.7  Score=31.39  Aligned_cols=46  Identities=15%  Similarity=0.345  Sum_probs=34.8

Q ss_pred             HHHHHHHH--HHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          262 KVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       262 ~~~~~~~~--~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      +.++.+-.  ++.+.++++.+-|++||..-++|.++++.|+.+....|
T Consensus        60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            34444433  35566889999999999999999999999986654443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.76
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.6
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.43
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.12

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.76  E-value=1.8e-07  Score=71.81  Aligned_cols=68  Identities=21%  Similarity=0.259  Sum_probs=62.2

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+++.++..+...+++++|.+.+..+ ....|+++++++++++||++++.|+.|+.+..+|+..+...+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45678888899999999999999888 899999999999999999999999999999999999886643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.60  E-value=1.3e-07  Score=75.33  Aligned_cols=68  Identities=21%  Similarity=0.259  Sum_probs=51.2

Q ss_pred             HHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845           79 SIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG  146 (335)
Q Consensus        79 a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~  146 (335)
                      .+++.++..++..+++++|++.+..+ ....|+++++++++++||++++.|++|+++.++|+.++...+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45688899999999999999988888 899999999999999999999999999999999999987643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.43  E-value=2.5e-07  Score=73.62  Aligned_cols=68  Identities=13%  Similarity=0.178  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          240 VFNLGSTGLLVSWLMKYADNIIKVYS-TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       240 i~~~ai~g~~~~~~lk~~~a~~~~~~-~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      ++..+++..+..+.+|+.+....... +.+.++++.++|+++|||++++.+++|+++|+.|+++.+..+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34445566677788898887776666 899999999999999999999999999999999998887654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.12  E-value=1.9e-05  Score=60.46  Aligned_cols=66  Identities=14%  Similarity=0.163  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845          242 NLGSTGLLVSWLMKYADNIIKVYS-TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP  307 (335)
Q Consensus       242 ~~ai~g~~~~~~lk~~~a~~~~~~-~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~  307 (335)
                      ..++...+..+.+|+.+....... ..+.++++.++|+++|||++|+.+++|.++|+.|+...+..+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344455666778898887766555 789999999999999999999999999999999998876653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00