Citrus Sinensis ID: 019863
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 334 | ||||||
| 297744438 | 388 | unnamed protein product [Vitis vinifera] | 0.973 | 0.837 | 0.672 | 1e-115 | |
| 359474781 | 335 | PREDICTED: protein BCCIP homolog [Vitis | 0.973 | 0.970 | 0.672 | 1e-115 | |
| 224061591 | 337 | predicted protein [Populus trichocarpa] | 0.970 | 0.961 | 0.649 | 1e-109 | |
| 255573744 | 324 | expressed protein, putative [Ricinus com | 0.970 | 1.0 | 0.655 | 1e-108 | |
| 357463585 | 390 | BCCIP-like protein [Medicago truncatula] | 0.970 | 0.830 | 0.613 | 1e-107 | |
| 357463583 | 327 | BCCIP-like protein [Medicago truncatula] | 0.970 | 0.990 | 0.613 | 1e-106 | |
| 357463587 | 364 | BCCIP-like protein [Medicago truncatula] | 0.970 | 0.890 | 0.613 | 1e-106 | |
| 388520831 | 333 | unknown [Medicago truncatula] | 0.970 | 0.972 | 0.613 | 1e-106 | |
| 357464815 | 323 | BCCIP-like protein [Medicago truncatula] | 0.961 | 0.993 | 0.619 | 1e-105 | |
| 297824477 | 327 | hypothetical protein ARALYDRAFT_903875 [ | 0.952 | 0.972 | 0.586 | 9e-95 |
| >gi|297744438|emb|CBI37700.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/333 (67%), Positives = 259/333 (77%), Gaps = 8/333 (2%)
Query: 1 MPRRPTRRRRMLNPQPLTFSPFARSVAQIASIHVDRCQTHKSKDQKGSPLNSKDKGIWKH 60
MPR+PTR R P P TFSPF R+VAQ+AS Q H+SK K SP N+ GI H
Sbjct: 63 MPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNGIINH 122
Query: 61 TLEGKNDLSESSEEEGSGGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLI 120
TLE K++ SE S+E+ S V QA+F FFDPKPDDFHGVKILLQTYLD+ WDLSGFVDLI
Sbjct: 123 TLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGFVDLI 182
Query: 121 LAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRL 180
L QTTVGTVVKIEGD+D+ FS++TALNL RYK HKC+ ELKEFLL V EKDV LRL
Sbjct: 183 LGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKDALRL 242
Query: 181 FMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLV 240
+GE+A +VGLLVSQRVVNLPPQLLPPLYDALFDE+SWATEDEPTEELR+ FCFK +LL+
Sbjct: 243 LLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKFFLLI 302
Query: 241 SKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVET 300
S+IY KHKNA Q ++ + D + I+YIKPEDEIFHKLS WSFSFP+ TQ V T
Sbjct: 303 SRIY--KHKNAGQ------RKGTRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTT 354
Query: 301 QELKNYRLMGLVMAVEAAKIPTFRQELQSLIVE 333
EL+NYRLMGLVMA+EA K+ TFR+EL +LI E
Sbjct: 355 HELRNYRLMGLVMAIEADKVSTFRKELHTLIDE 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359474781|ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224061591|ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255573744|ref|XP_002527793.1| expressed protein, putative [Ricinus communis] gi|223532828|gb|EEF34603.1| expressed protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357463585|ref|XP_003602074.1| BCCIP-like protein [Medicago truncatula] gi|355491122|gb|AES72325.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357463583|ref|XP_003602073.1| BCCIP-like protein [Medicago truncatula] gi|355491121|gb|AES72324.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357463587|ref|XP_003602075.1| BCCIP-like protein [Medicago truncatula] gi|355491123|gb|AES72326.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|388520831|gb|AFK48477.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357464815|ref|XP_003602689.1| BCCIP-like protein [Medicago truncatula] gi|355491737|gb|AES72940.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297824477|ref|XP_002880121.1| hypothetical protein ARALYDRAFT_903875 [Arabidopsis lyrata subsp. lyrata] gi|297325960|gb|EFH56380.1| hypothetical protein ARALYDRAFT_903875 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 334 | ||||||
| TAIR|locus:2050584 | 326 | AT2G44510 "AT2G44510" [Arabido | 0.934 | 0.957 | 0.515 | 1.7e-73 | |
| ASPGD|ASPL0000002569 | 290 | AN6865 [Emericella nidulans (t | 0.619 | 0.713 | 0.285 | 2.1e-20 | |
| POMBASE|SPCC613.08 | 282 | SPCC613.08 "CDK regulator, inv | 0.577 | 0.684 | 0.278 | 1.5e-19 | |
| UNIPROTKB|G4MUW7 | 289 | MGG_01709 "Uncharacterized pro | 0.631 | 0.730 | 0.287 | 1.4e-18 | |
| UNIPROTKB|Q9P287 | 314 | BCCIP "BRCA2 and CDKN1A-intera | 0.556 | 0.592 | 0.276 | 4.4e-15 | |
| UNIPROTKB|E1BUA8 | 303 | BCCIP "Uncharacterized protein | 0.559 | 0.617 | 0.273 | 3.8e-14 | |
| UNIPROTKB|Q2NL37 | 306 | BCCIP "BRCA2 and CDKN1A-intera | 0.553 | 0.604 | 0.280 | 2e-13 | |
| UNIPROTKB|F1SDM6 | 318 | BCCIP "Uncharacterized protein | 0.556 | 0.584 | 0.276 | 3.7e-12 | |
| MGI|MGI:1913415 | 316 | Bccip "BRCA2 and CDKN1A intera | 0.556 | 0.588 | 0.258 | 1.1e-11 | |
| CGD|CAL0001325 | 321 | orf19.6346 [Candida albicans ( | 0.622 | 0.647 | 0.269 | 3.9e-11 |
| TAIR|locus:2050584 AT2G44510 "AT2G44510" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 167/324 (51%), Positives = 210/324 (64%)
Query: 11 MLNPQPLTFSPFAR--SVAQIASIHVDRCQTHKSKDQKGSPLNSKDKGIWKHTLEGKND- 67
+L QPLTFSPF R S A +A + + + D+ S + K K I +GK +
Sbjct: 11 VLKHQPLTFSPFMRLLSFASMARRDLSHPEDCQCSDEDIS-FDEKQK-IPNLPRKGKEEQ 68
Query: 68 LXXXXXXXXXXXVVQAXXXXXXXXXXXXHGVKILLQTYLDDAQWDLSGFVDLILAQTTVG 127
+ VQA HGVKILLQ YLDD +WDLS FVD IL QTTVG
Sbjct: 69 VSDSSDEEDSQEDVQADFEFFDPKPTDFHGVKILLQNYLDDKEWDLSSFVDCILEQTTVG 128
Query: 128 TVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQAN 187
TVVK+ D+D + F++VTALN+ R KD+KC +ELKEFL KVC EK++ +L + + ++A
Sbjct: 129 TVVKVADDEDESVFALVTALNMARDKDNKCFRELKEFLRKVCSEKNIANNLEMLLEKKAQ 188
Query: 188 DVGLLVSQRVVNXXXXXXXXXYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLK 247
DVGLLVSQRV+N YD LFDEVSWA EDEPTE+LR F FK YLLV+KIYKLK
Sbjct: 189 DVGLLVSQRVMNLPPQLLPPLYDGLFDEVSWAIEDEPTEKLRRSFRFKSYLLVTKIYKLK 248
Query: 248 HKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYR 307
N Q+ K R + ++ V++KPEDE+F +LS WSF+FPM++Q V +QE+KNY+
Sbjct: 249 --NPKQR-----KPRHGEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTSQEMKNYQ 301
Query: 308 LMGLVMAVEAAKIPTFRQELQSLI 331
LMGLVMAVEA KIP FRQ L SLI
Sbjct: 302 LMGLVMAVEANKIPKFRQMLNSLI 325
|
|
| ASPGD|ASPL0000002569 AN6865 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPCC613.08 SPCC613.08 "CDK regulator, involved in ribosome export (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MUW7 MGG_01709 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9P287 BCCIP "BRCA2 and CDKN1A-interacting protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BUA8 BCCIP "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2NL37 BCCIP "BRCA2 and CDKN1A-interacting protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SDM6 BCCIP "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1913415 Bccip "BRCA2 and CDKN1A interacting protein" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001325 orf19.6346 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 334 | |||
| pfam13862 | 189 | pfam13862, BCIP, p21-C-terminal region-binding pro | 9e-74 |
| >gnl|CDD|222424 pfam13862, BCIP, p21-C-terminal region-binding protein | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 9e-74
Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 79 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDN 138
V DF FFDP DFHG+K LL+ DA+ DLS DLIL Q T+G+V+K +++
Sbjct: 1 EEVNVDFEFFDPNDIDFHGIKNLLRQLFLDAEIDLSELADLILEQNTIGSVIKQSDGEED 60
Query: 139 TPFSIVTALNLRRYKDHKCIKELKEFLLKVCLE---KDVIKDLRLFMGEQANDVGLLVSQ 195
+ ++ LNL +YKD IK+L+E+LL + K+V+ L + + VGLL+++
Sbjct: 61 DVYGFLSVLNLTQYKDSPAIKQLREYLLDKAKKSADKEVLAKLEKLLSDSDKKVGLLINE 120
Query: 196 RVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKN 255
R +N+PP+L+PPLY L +E+ WA EDE + F YL++SK+YK N K
Sbjct: 121 RFINMPPELVPPLYKMLLEEIEWAQEDE------KPYKFTHYLILSKVYKENDPNKKAKK 174
Query: 256 KRNLKRRSASDSGDEIVYIKPEDEIFH 282
K DE++Y PEDE
Sbjct: 175 K------------DELIYFNPEDEFLF 189
|
This family of p21-binding proteins is important as a modulator of p21 activity. The domain binds the C-terminal region of p21 in a ternary complex with CDK2, which results in inhibition of the kinase activity of CDK2. Length = 189 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 334 | |||
| PF13862 | 194 | BCIP: p21-C-terminal region-binding protein | 100.0 | |
| KOG3034 | 308 | consensus Isoamyl acetate-hydrolyzing esterase and | 100.0 |
| >PF13862 BCIP: p21-C-terminal region-binding protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-63 Score=449.67 Aligned_cols=191 Identities=47% Similarity=0.861 Sum_probs=169.5
Q ss_pred CeEEEEEeecCCCCCCHHHHHHHHHHhhcccCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeecccccCchhH
Q 019863 79 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCI 158 (334)
Q Consensus 79 e~V~VDFeffdp~e~DfhgIK~LL~qlf~~~~~dls~LaDlIl~Q~~vGTvIK~~~ded~dvyg~~SvLNL~~~k~~~~i 158 (334)
|+|||||+||||+|.||||||+||+|||++++||+++|||+|++|++||||||++|++|++||||+|||||++|++++|+
T Consensus 1 e~V~vdFe~~dp~~~D~hgIk~LL~ql~~~~~~dl~~LadlIi~Q~~vGsvVK~~d~~e~dvyg~~Svlnl~~~k~~~~i 80 (194)
T PF13862_consen 1 EEVNVDFEFFDPNEIDFHGIKNLLQQLFLDAEIDLSELADLIIEQNNVGSVVKQADGDEDDVYGFLSVLNLTQHKDHPCI 80 (194)
T ss_pred CeEEEEEEeeCCChhhHHHHHHHHHHhccccCcCHHHHHHHHHcCCCCceEEEecCCCCCcceEEEEEEEcccccccHHH
Confidence 57999999999999999999999999999999999999999999999999999954567899999999999999999999
Q ss_pred HHHHHHHHhhcc---chhhHHHHHHHhcCCCCceEEEEecccccCCccchHHHHHHHHHHHHHhhhCCChhhhcCcccce
Q 019863 159 KELKEFLLKVCL---EKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFK 235 (334)
Q Consensus 159 ~~L~~yLlk~~~---~~~~~~~L~~lL~~~~~~vGLlinER~iN~P~ql~ppL~~~L~eEI~~A~e~~~~ee~r~~f~F~ 235 (334)
++|++||+++|+ .+++.+.|+++|++++++|||||||||+|||+||+||||++|++||+||.+++ ++|+|+
T Consensus 81 ~~l~~yl~~k~~~~~~~~~~~~l~~~l~~~~~~vGLlinER~iN~P~ql~ppl~~~L~~ei~~a~~~~------~~~~f~ 154 (194)
T PF13862_consen 81 KQLRKYLLSKCSKSADKEVKKKLEKLLSSSNKNVGLLINERFINIPPQLAPPLYKMLLEEIEWAQEDE------KPFKFT 154 (194)
T ss_pred HHHHHHHHHHhhhccChhHHHHHHHHHhccCCCeEEEEehhhhcCCHHHHHHHHHHHHHHHHHHHhcC------CCCCCe
Confidence 999999999886 57788999999998889999999999999999999999999999999999875 679999
Q ss_pred EEEEEEeEEeeccccchhhhhhhhhccCCCCCCCcccccCchhhHHh
Q 019863 236 CYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFH 282 (334)
Q Consensus 236 hyL~isK~y~~~~~~~~~k~~k~kKk~~~~~~~~ei~y~~pEDEi~~ 282 (334)
|||+|||+|+.... ++++++++ ....++++|+|||||+|+
T Consensus 155 ~yL~isk~y~~~~~--~~~~~~~~-----~~~~~~~~~~~~Ede~~~ 194 (194)
T PF13862_consen 155 HYLIISKVYKEKKK--KKRKKKKK-----KKKKDEIIYFNPEDEIFH 194 (194)
T ss_pred EEEEEEEEEeeccc--cccccccc-----cCCcccceeCChhhhhcC
Confidence 99999999985222 11111111 123478999999999985
|
|
| >KOG3034 consensus Isoamyl acetate-hydrolyzing esterase and related enzymes [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 334 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 9e-07
Identities = 42/256 (16%), Positives = 76/256 (29%), Gaps = 65/256 (25%)
Query: 40 HKSKDQKGSPLNSKDKGIWKHTLEG-KNDLSESSEEEGSGGVV---QADFVFFDPKPDDF 95
H D + + K I + ++ ++ ++ + D + D
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII--MSKDAV 61
Query: 96 HGVKILLQTYLDDAQWDLSGFVDLILA---------------QTTVGTVVKIEGDD---- 136
G L T L + + FV+ +L Q ++ T + IE D
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 137 DNTPFSIVTALNLRRYKDHKCIKELKEFLL-----------------KVCLEKDVIKDLR 179
DN F+ N+ R + +L++ LL K + DV +
Sbjct: 122 DNQVFA---KYNVSR---LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175
Query: 180 L--------F---MGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATE-DEPTEE 227
+ F + + +L + + L Q+ P + E
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 228 LRNFFCFKCY---LLV 240
LR K Y LLV
Sbjct: 234 LRRLLKSKPYENCLLV 249
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00