Citrus Sinensis ID: 019865

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccHHHccccccHHHHHHHHHccHHHHHHHHHHHHHccEEEEEcccccEEEcEEEEEEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEcHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLvpssfifyrkrtppqltwSIVCRIFLLGLLSCCGQMFhyfgiengspaLASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYkglpitsapsknKLINELvqlplsnwtiGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVaeknpnawrlrpdieLMAIGYSAIFAVSVRSVFHTwalrkkgpvyvsMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Flexible Loop (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Low Complexity Region (SEG)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Disordered region (IsUnstruct)
*****TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLG***
Disordered Region (DISOPRED)
*GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA*****************WTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV***********VL*****
Disordered Region (DISEMBL)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Disordered Region (DISPRO)
*GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS*************SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFV***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLLGQRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
Q94JU2	367	WAT1-related protein At3g	yes	no	0.874	0.795	0.447	7e-61
Q945L4	339	WAT1-related protein At5g	no	no	0.898	0.884	0.421	2e-60
Q9FL08	368	WAT1-related protein At5g	no	no	0.892	0.809	0.424	5e-59
F4KHA8	370	WAT1-related protein At5g	no	no	0.916	0.827	0.405	9e-58
F4JK59	347	WAT1-related protein At4g	no	no	0.892	0.858	0.398	2e-49
Q9LRS5	353	WAT1-related protein At3g	no	no	0.877	0.830	0.423	4e-48
Q56X95	355	WAT1-related protein At3g	no	no	0.922	0.867	0.396	2e-47
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.907	0.841	0.414	2e-44
Q9FL41	402	WAT1-related protein At5g	no	no	0.883	0.733	0.350	2e-44
F4IYZ0	358	WAT1-related protein At3g	no	no	0.907	0.846	0.391	1e-42

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  234 bits (597), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/295 (44%), Positives = 188/295 (63%), Gaps = 3/295 (1%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           A+V +E  +VGLNT+ KAA  +G S  + +VYS  LA  LL+PS F  +R RT P + +S
Sbjct: 15  ALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRTLPPMNFS 74

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG++ CC  +  Y GI   SP LASA+ +LTP FTF+LA++FRME +  +  S
Sbjct: 75  ILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFKRTS 134

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
           S AK  GTV+ IGGA IVTLY G P+  A S    ++   Q    NW +G  FLA     
Sbjct: 135 SVAKMLGTVVSIGGAFIVTLYNG-PVVIAKSPPS-VSLRSQSTNPNWILGAGFLAVEYFC 192

Query: 188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIG 246
           + ++YIVQ  I+R+YPAE  V    SI V+  ++ V+L  E N   AW+++P+I L++I 
Sbjct: 193 VPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIALVSIV 252

Query: 247 YSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
            S +F   + +  HTWALR KGP++V+MFKPL + +A+  G+ FL D+LY+G  +
Sbjct: 253 CSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLI 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 203/323 (62%), Gaps = 23/323 (7%)

Query: 5   VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL 64
           +  AMV  EF +VG+NT+ KAA S+G S F+++VYS T    LL+P +F  +R R+ P L
Sbjct: 13  ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPL 72

Query: 65  TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124
           T+SI+C + +LGL++   Q+  Y GI+  SP L+SAM ++ P FTFILA++FRME + L 
Sbjct: 73  TFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLG 132

Query: 125 VQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAH 184
            +SS AK  GT+L I GAL+VTLY G  + S+               S+W IGG  LA  
Sbjct: 133 KKSSVAKVLGTILSIIGALVVTLYHGPMLMSSH--------------SDWIIGGGLLALQ 178

Query: 185 SVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIELM 243
            +++++ Y+V A  +  YP+ ++VTL+ ++ + ++ + VSL+AEK NP AW +R DI L+
Sbjct: 179 YILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLI 238

Query: 244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCM 303
            +  + I   S   V HTWA+  KGPVY+SMFKPL +++A V    FLG++LYLG  +  
Sbjct: 239 TVVATGILN-SGYYVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGG 297

Query: 304 ILRGLQFLRI-------NKVEIM 319
           IL  + F  +       +KV+I+
Sbjct: 298 ILISIGFYMVLWGKAKEDKVDII 320

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  228 bits (581), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 186/306 (60%), Gaps = 8/306 (2%)

Query: 7   AAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW 66
           AAM  +E   VG NT+ KAA  RG S ++ V YS  ++  LL+P S IF R R  P    
Sbjct: 22  AAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGRSRRLPAAKS 81

Query: 67  SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
            +  +IFLLGL+    Q+    GI   SP LASA+ +LTP FTF LA+IFRME++ LR  
Sbjct: 82  PLFFKIFLLGLVGFMSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFRMEQVRLRSS 141

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI------NELVQLPLSNWTIGGIF 180
           ++QAK  G +L I GAL+V LYKG  + ++ S   ++       +L  +  S+W IGG+ 
Sbjct: 142 ATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIE-SSWIIGGLL 200

Query: 181 LAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240
           LA+   +++++YI+Q  ++  YP E+ V    ++F T++S  V L AE N  +W L+PDI
Sbjct: 201 LASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLTSWVLKPDI 260

Query: 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC 300
            L AI YS +F     ++ HTW L  KGPVY+S+F+PL + +A+  G  FLGD L+LG  
Sbjct: 261 SLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLGDALHLGSV 320

Query: 301 V-CMIL 305
           +  MIL
Sbjct: 321 IGSMIL 326

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  224 bits (570), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 189/311 (60%), Gaps = 5/311 (1%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AMV +E + VG NT+ KAA  RG S ++ V Y+  +A  +L+P S IF R +  P     
Sbjct: 24  AMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLPSAKTP 83

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           +   IFLL L+     +    GIE  SP LASA+ +LTP FTF LA+IFRME++ LR  +
Sbjct: 84  VFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSA 143

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITS-----APSKNKLINELVQLPLSNWTIGGIFLA 182
           +QAK  GT++ I GAL+V LYKG  + +      PS    + + +    S+W IGG+ LA
Sbjct: 144 TQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDSSWIIGGLLLA 203

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242
              ++++++YI+Q  ++  YP E+ V  + ++  T++S+ V L AEK+ N++ L+P + L
Sbjct: 204 TQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVSL 263

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302
            ++ YS     S  SV HTW L  KGPVY+S+FKPL +V+A+  G+ FLGD LYLG  + 
Sbjct: 264 ASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVIG 323

Query: 303 MILRGLQFLRI 313
            ++  L F  +
Sbjct: 324 SLILSLGFYTV 334

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  196 bits (499), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+ +E   VG + + KAA  RG S ++ V Y+   A  +L+  S IF R R+ P    S
Sbjct: 20  AMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRSLPTAKSS 79

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           +  +IFLL LL    ++    GIE  SP L+SA+ +LTP FTFILAI FRME++ LR  +
Sbjct: 80  LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
           +QAK  GT++ I GAL++ LYKG  +  A S             S+W IGG+ L    ++
Sbjct: 140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF--------ESSWIIGGLLLGLQFLL 191

Query: 188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGY 247
           L++++I+Q  I+  YP E+ V    ++  T++S  V L+ EK+ N+W+L+P   L ++ Y
Sbjct: 192 LSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIY 251

Query: 248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRG 307
           S +F  S+ SV HTW L  KGPVY+S+FKPL + +A+     FLGDTL+LG  +  ++  
Sbjct: 252 SGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILS 311

Query: 308 LQFLRI 313
             F  +
Sbjct: 312 FGFYTV 317

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  192 bits (487), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/302 (42%), Positives = 187/302 (61%), Gaps = 9/302 (2%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct: 17  AMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRSLPPLSLS 76

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLGLL     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct: 77  ILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPI---TSAPSKN-KLINELVQLPLSNWTIGGIFLAA 183
           S AK  GT+L + GAL+V LY G  +   +S P  N + ++  +    S+W IGG  L  
Sbjct: 137 SVAKVMGTILSLIGALVVVLYHGPRVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+QA I+  YPA   V+ +  + V+I++S + LV EK NP+ W +R DI L
Sbjct: 197 RDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDITL 256

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302
           + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V    FL D+LYLG   C
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLG---C 312

Query: 303 MI 304
           +I
Sbjct: 313 LI 314

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/318 (39%), Positives = 188/318 (59%), Gaps = 10/318 (3%)

Query: 3   ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
           A +  AM+  E  +V +NT+ KAA S+G + +  ++YS  +   +L+PS    YR R+ P
Sbjct: 11  AVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRSLP 70

Query: 63  QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
            L+ SI+C+I +LGLL     +  + GIE  +P LASA+ ++ P  TFILAIIFRMEK  
Sbjct: 71  SLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEKAS 130

Query: 123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQ------LPLSNWTI 176
            + +SS AK  GT++ + GAL+V LY G P    PS      +L Q         S+W I
Sbjct: 131 FKEKSSVAKMVGTIVSLVGALVVVLYHG-PRVFTPSSPPF-PQLRQLLLPLSSSNSDWII 188

Query: 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWR 235
           GG  LA    ++ + +I+QA I++ YPA   V+    +  +IL+S + +VAEK NP+ W 
Sbjct: 189 GGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWI 248

Query: 236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTL 295
           +  DI L+ I    IF     ++ H WA+R KGPVY+++F+PL +++A++ G  FLGD+ 
Sbjct: 249 IHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSF 307

Query: 296 YLGRCVCMILRGLQFLRI 313
           YLG  V  IL  L F  +
Sbjct: 308 YLGSLVGGILISLGFYTV 325

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 185/309 (59%), Gaps = 6/309 (1%)

Query: 7   AAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW 66
            AM+ +E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R  + P L+ 
Sbjct: 19  TAMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSSLPPLSV 78

Query: 67  SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
           SI+ +I LLG L     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +
Sbjct: 79  SILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKER 138

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL----SNWTIGGIFLA 182
           SS AK  GT+L + GAL+V  Y G  +  A S   +       PL    S+W IGG  L 
Sbjct: 139 SSLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLT 198

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIE 241
              + +++ +I+QA I+  YPA   V+ + ++ V+I++S + LV EK NP+ W +  DI 
Sbjct: 199 MQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDIT 258

Query: 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
           L+ I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  +
Sbjct: 259 LITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI 317

Query: 302 CMILRGLQF 310
             IL  L F
Sbjct: 318 GGILITLGF 326

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 178/311 (57%), Gaps = 16/311 (5%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM++L+F   G+N +TK +++ G SH++LVVY + +A  ++ P +F F+ ++  P++T+S
Sbjct: 21  AMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAF-FFERKAQPKITFS 79

Query: 68  IVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
           I  ++F+LGLL     Q F+Y G++  SP  + AM ++ P  TFILA++FRME L+L+  
Sbjct: 80  IFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKL 139

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPITS----------APSKNKLINELVQLPLSNWTI 176
             QAK  GTV+ + GA+++T+YKG PI              S     +         +  
Sbjct: 140 WCQAKIAGTVVTVAGAMLMTIYKG-PIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLK 198

Query: 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAEL--MVTLICSIFVTILSSAVSLVAEKNPNAW 234
           G I L   ++  A  +++QA I++ Y      + TLIC I  T+ + AV+ V E NP+AW
Sbjct: 199 GSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFI-GTLQAVAVTFVMEHNPSAW 257

Query: 235 RLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDT 294
           R+  D+ L+A  YS I A S+        ++K+GPV+ + F PL MV+  V G   L + 
Sbjct: 258 RIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEK 317

Query: 295 LYLGRCVCMIL 305
           ++LG  +  +L
Sbjct: 318 IFLGGVIGAVL 328

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  174 bits (440), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 184/309 (59%), Gaps = 6/309 (1%)

Query: 7   AAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW 66
            AM+  E   VGL+T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ 
Sbjct: 16  TAMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLFFTNRSRSLPPLSA 75

Query: 67  SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
           SI+ +I LLG L     +    GIE  +P LASA+ ++ P  TFILA+IFRMEK+  + +
Sbjct: 76  SILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKER 135

Query: 127 SSQAKSFGTVLLIGGALIVTLYKGLPI---TSAPSKN-KLINELVQLPLSNWTIGGIFLA 182
           SS AK  GT+L + GA +V  Y G  +   +S P  N + ++  +    S+W IGG  L 
Sbjct: 136 SSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILT 195

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIE 241
              + +++ +I+Q  I+R+YP    V+++  + ++I++S + LV EK NP+ W +  DI 
Sbjct: 196 IQGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDIT 255

Query: 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
           L  I  + I   SV  V H+WA+R K P+Y+++FKPL +++A+V G  FL D+LYLG  +
Sbjct: 256 LFTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLI 314

Query: 302 CMILRGLQF 310
             IL  L F
Sbjct: 315 GGILITLGF 323

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
255581154	354	Auxin-induced protein 5NG4, putative [Ri	0.925	0.872	0.629	1e-108
255581150	348	Auxin-induced protein 5NG4, putative [Ri	0.934	0.896	0.589	2e-99
225424734	341	PREDICTED: auxin-induced protein 5NG4-li	0.949	0.929	0.548	1e-93
296086520	350	unnamed protein product [Vitis vinifera]	0.949	0.905	0.548	1e-93
359473431	348	PREDICTED: auxin-induced protein 5NG4-li	0.895	0.859	0.548	8e-91
225424732	351	PREDICTED: auxin-induced protein 5NG4 [V	0.958	0.911	0.509	5e-88
356502006	349	PREDICTED: auxin-induced protein 5NG4-li	0.919	0.879	0.539	8e-86
388507570	344	unknown [Medicago truncatula]	0.889	0.863	0.558	2e-84
357485995	344	Auxin-induced protein 5NG4 [Medicago tru	0.889	0.863	0.558	2e-84
296086528	317	unnamed protein product [Vitis vinifera]	0.808	0.851	0.555	9e-83

>gi|255581154|ref|XP_002531390.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528983|gb|EEF30974.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/310 (62%), Positives = 248/310 (80%), Gaps = 1/310 (0%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           G+ VTA M+TLEFL+VG+NTVTKAAMS+G SH+ILVVYSN +AI LL+ SS IFYRKR  
Sbjct: 6   GSGVTAVMLTLEFLEVGMNTVTKAAMSKGMSHYILVVYSNMIAISLLLSSSLIFYRKRIA 65

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P +T SI+CRIF+L LLSC GQ+F Y GI   SP LASAMIDLTP FTFIL +  RME+L
Sbjct: 66  PAITLSIICRIFVLSLLSCAGQVFTYIGIGYSSPTLASAMIDLTPAFTFILGVFSRMERL 125

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS-APSKNKLINELVQLPLSNWTIGGIF 180
           +LR++S QAKS GT++LI G L+ TLYKGLPIT  + S ++L  E++ L  SNW IGG F
Sbjct: 126 DLRIKSGQAKSIGTMVLIIGGLVFTLYKGLPITGISSSGDELHKEMLFLSPSNWAIGGFF 185

Query: 181 LAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240
           LAAHS+ILA+ +++Q WI+RDYP+ L+  L    FVTILS++VSLVAEK+PNAWR++PDI
Sbjct: 186 LAAHSIILALIFVIQTWIIRDYPSVLITNLFTCTFVTILSASVSLVAEKDPNAWRIKPDI 245

Query: 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC 300
           +L++IG++A+FAVS+RSV HTWA  KKGPVY SMFKP+GMV+A+  G++FLGDTLYLG  
Sbjct: 246 QLISIGFTAVFAVSLRSVVHTWACHKKGPVYTSMFKPIGMVIAVFMGVSFLGDTLYLGSV 305

Query: 301 VCMILRGLQF 310
           +  ++    F
Sbjct: 306 IGAVIIAFGF 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581150|ref|XP_002531388.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223528981|gb|EEF30972.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 184/312 (58%), Positives = 233/312 (74%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           G  VTAAMV  EF +VG+NT+ KAAMSRG S F+  VYSN  A+ +L+PSSFIFYR+R  
Sbjct: 3   GTGVTAAMVATEFTEVGINTMMKAAMSRGMSQFVYTVYSNAFALLILIPSSFIFYRRRPR 62

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           PQLT SI+ R FLLGLLSCC QMF   G++  SP L++AMIDLTP FTF+LAII RMEKL
Sbjct: 63  PQLTVSIIFRTFLLGLLSCCVQMFMNTGVKYSSPTLSAAMIDLTPAFTFLLAIISRMEKL 122

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFL 181
           + + QS+QAKS GT++ + GALIVTLYKG PIT+ PS++  +N+ + L  S W  GGIF 
Sbjct: 123 DYKSQSTQAKSIGTIVSVAGALIVTLYKGQPITTLPSESNSLNQPLLLLSSTWVTGGIFC 182

Query: 182 AAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241
            A ++ LA+ YIVQ WI++D PAEL++T I   FVT+LSS V+LVAEK+ ++W L+PDIE
Sbjct: 183 TAGALCLALLYIVQTWILKDCPAELIITCIACFFVTVLSSIVALVAEKDISSWILKPDIE 242

Query: 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
           L+A   SA+FAVS+RSV H WA RKKGP+Y SMFKPLG+++A   G  FLGDTLY G  +
Sbjct: 243 LIATFCSAVFAVSIRSVVHAWACRKKGPLYASMFKPLGIIIATFLGFYFLGDTLYDGSVI 302

Query: 302 CMILRGLQFLRI 313
             I+  L F  +
Sbjct: 303 GGIIIALGFYSV 314

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424734|ref|XP_002266639.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  349 bits (896), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 232/321 (72%), Gaps = 4/321 (1%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           M+ +E L++GLNT++KAAMSRG S+F+ VVYSNT AI  L+ S  +F+R++TPP LT SI
Sbjct: 1   MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLLSCLLFHRRKTPPPLTTSI 60

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIF+LGL+SC  QMF Y GI   SP LASAM DL P FTFILAII RME L+LRV+SS
Sbjct: 61  LCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRSS 120

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AKS GT++ I GAL +T+Y+G P+      +  +N  V LP SNW IGGI  A  + +L
Sbjct: 121 RAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFML 180

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+ ++ Q  I+R YPAELMVTLIC  FV + SS VSL+AE+NP+AWRLRPDIEL+AI YS
Sbjct: 181 AVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVYS 240

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGL 308
           A+  V +RSV   W +R+KGP + +MFKP+G+++A+V G+ FLGDTLYLG  V   +  +
Sbjct: 241 AVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIAI 300

Query: 309 QFLRI----NKVEIMMNFVCA 325
            F  +    +K E ++  V A
Sbjct: 301 GFYTVMWGKDKEETLLEDVPA 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086520|emb|CBI32109.3| unnamed protein product [Vitis vinifera]

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 232/321 (72%), Gaps = 4/321 (1%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           M+ +E L++GLNT++KAAMSRG S+F+ VVYSNT AI  L+ S  +F+R++TPP LT SI
Sbjct: 10  MLVIESLEMGLNTISKAAMSRGMSNFVFVVYSNTFAIPFLLLSCLLFHRRKTPPPLTTSI 69

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIF+LGL+SC  QMF Y GI   SP LASAM DL P FTFILAII RME L+LRV+SS
Sbjct: 70  LCRIFVLGLISCSIQMFMYVGIRYSSPTLASAMTDLVPAFTFILAIITRMENLDLRVRSS 129

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AKS GT++ I GAL +T+Y+G P+      +  +N  V LP SNW IGGI  A  + +L
Sbjct: 130 RAKSIGTIMSITGALTMTMYEGPPVAFTSLTSTKLNGNVTLPQSNWVIGGILSAIAAFML 189

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+ ++ Q  I+R YPAELMVTLIC  FV + SS VSL+AE+NP+AWRLRPDIEL+AI YS
Sbjct: 190 AVLFVFQTSIIRAYPAELMVTLICCTFVAMQSSIVSLMAERNPSAWRLRPDIELIAIVYS 249

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGL 308
           A+  V +RSV   W +R+KGP + +MFKP+G+++A+V G+ FLGDTLYLG  V   +  +
Sbjct: 250 AVLVVGLRSVASAWVMRRKGPFFAAMFKPVGIIIAVVMGVTFLGDTLYLGSVVGAAIIAI 309

Query: 309 QFLRI----NKVEIMMNFVCA 325
            F  +    +K E ++  V A
Sbjct: 310 GFYTVMWGKDKEETLLEDVPA 330

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473431|ref|XP_002265468.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  340 bits (871), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 164/299 (54%), Positives = 224/299 (74%)

Query: 3   ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
           + + A M+ +E L+VGL+T++KAAM RG S F+ VVYSN L++ +L+    +F+R+R PP
Sbjct: 4   SDLMALMLIIECLEVGLSTLSKAAMRRGMSDFVFVVYSNALSVPILLFCCLLFHRRRFPP 63

Query: 63  QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
            LT SI+CRIF+LG +SC  QMF + GI   SP LASAM DL P FTFILAII RMEKL+
Sbjct: 64  PLTLSILCRIFILGFISCSTQMFLFVGIRYSSPTLASAMTDLVPAFTFILAIISRMEKLD 123

Query: 123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLA 182
           L+  S +AK  GT++ I GALIVT+YKG  I  A S  K+++E ++  +SNW IGG  LA
Sbjct: 124 LKAGSCRAKCIGTIVSIIGALIVTIYKGPQIAFASSTFKILDENLRSQISNWVIGGFLLA 183

Query: 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242
             +V +A++Y+VQ  I+RDYPAELM+T IC IFVT+ SS VSL+AE++P+AWRL+PD+EL
Sbjct: 184 ISAVSIALFYVVQTSIIRDYPAELMLTFICHIFVTMQSSIVSLIAERDPSAWRLKPDVEL 243

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
           +A+GYSA+  ++ R   H W L KKGPV+V+MFKP+ +V+A+V G+ FLGD L+LG  +
Sbjct: 244 IAVGYSAVLVLAFRGTAHAWVLHKKGPVFVAMFKPVAIVIAVVMGVTFLGDVLHLGSVI 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424732|ref|XP_002266096.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296086521|emb|CBI32110.3| unnamed protein product [Vitis vinifera]

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 165/324 (50%), Positives = 230/324 (70%), Gaps = 4/324 (1%)

Query: 9   MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI 68
           ++T+E LDVGL T++KAAM RG S ++ VVYSN LA+ +L   S +F+R+R+PP LT SI
Sbjct: 11  LLTIECLDVGLITLSKAAMRRGMSDYVFVVYSNALAVPVLFLCSLLFHRRRSPPPLTPSI 70

Query: 69  VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSS 128
           +CRIFLLGL+SC  QM  + GI   SP LASAM +L P FT++LAI+ RMEKL+L+V+SS
Sbjct: 71  LCRIFLLGLVSCSLQMLKFIGIGYSSPTLASAMTNLIPAFTYVLAIVTRMEKLDLKVKSS 130

Query: 129 QAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188
           +AK  GT++ + GAL++T+YKG  I  A +   ++N  + LP SNW IGG   AA + ++
Sbjct: 131 RAKCLGTLVSVAGALLITIYKGPGIEFASTTPSMLNHNLLLPRSNWIIGGFLTAAAAFMV 190

Query: 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYS 248
           A+  + Q  I+RDYPAEL+VTLI  IF T+ SS VSL+AE++P+AWRLR D+EL+A+GYS
Sbjct: 191 AVLLVFQTSIIRDYPAELIVTLISHIFATMQSSLVSLIAERDPSAWRLRLDMELIAVGYS 250

Query: 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGL 308
            IF V++R   + W L +KGPV+V+MFKP G+V+A++ G+ FLGD L+LG  +   +  L
Sbjct: 251 GIFVVALRGAVYAWVLHQKGPVFVAMFKPAGIVIAVIMGVTFLGDKLHLGSVIGAAIIAL 310

Query: 309 QFLRI----NKVEIMMNFVCACAV 328
            F  +     K E M   + AC V
Sbjct: 311 GFYTVVWGKAKEEKMAEDIAACGV 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502006|ref|XP_003519813.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  323 bits (828), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 170/315 (53%), Positives = 222/315 (70%), Gaps = 8/315 (2%)

Query: 1   MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT 60
           +G SV+AAMV   FL+VGLNT+ KAA + G S+F+ +VYSN LA+F L+PS+F+++RKR 
Sbjct: 4   VGVSVSAAMVATLFLEVGLNTLIKAANTNGMSNFVFIVYSNFLALFFLIPSTFLYHRKRA 63

Query: 61  PPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEK 120
           PP +  SI+ RIFLL  LS   Q   Y GI   SP L SAM DL P FTFI AII RME 
Sbjct: 64  PPPIPSSILWRIFLLCCLSTAVQTLTYTGIAYSSPTLNSAMSDLVPAFTFIFAIISRMEN 123

Query: 121 LELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINE-----LVQLPLSNWT 175
           L L+++SS AK  GTV+ I GALI+TLYKG+P+T +  +N ++        VQL   +W 
Sbjct: 124 LNLKLRSSHAKIIGTVISIAGALIITLYKGMPLTGSSMRNLVLGGSEAYLSVQL---DWI 180

Query: 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR 235
           IGG  LA  S+ L++ +IVQ WI++DYP EL+VT IC   V ILS+ V+L AE NP AW 
Sbjct: 181 IGGFLLATSSLCLSVLFIVQTWIIKDYPEELVVTTICCSPVVILSTIVALFAEANPRAWI 240

Query: 236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTL 295
           L+ + EL+A+ YSAIF VS+RSV +TWA+RKKGPVYV+MF PLGMV+A+  G+ FLG++L
Sbjct: 241 LKSNKELIAVFYSAIFVVSMRSVVYTWAMRKKGPVYVAMFSPLGMVIAIGMGVIFLGESL 300

Query: 296 YLGRCVCMILRGLQF 310
           YLG  +     G+ F
Sbjct: 301 YLGSMIGAATIGIGF 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507570|gb|AFK41851.1| unknown [Medicago truncatula]

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/299 (55%), Positives = 210/299 (70%), Gaps = 2/299 (0%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           GASVTA MV ++FL+VG NT+ KAA + G S F+   YSN  A+  L+P +F ++RKR P
Sbjct: 5   GASVTATMVAVQFLEVGGNTLIKAATNDGTSIFVFTFYSNLFALCFLLPLTFFYHRKRAP 64

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P ++ SI+CR+FLL  LS   Q+    GIE  SP LASAM+DL P FTFILA+I RME L
Sbjct: 65  PSISSSILCRMFLLSCLSTAVQILTNTGIECSSPTLASAMLDLLPAFTFILALISRMENL 124

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL-VQLPL-SNWTIGGI 179
            L+  SSQAK  GTV+ I GAL VTLYKG+P+ S   +N  I    + L + S+W +G  
Sbjct: 125 NLKHHSSQAKIIGTVVSIAGALTVTLYKGIPLISDAFQNIEIGASGIHLSVKSDWILGAF 184

Query: 180 FLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPD 239
            LA  S  L++ YIVQ WI+RDYP EL+VT IC   V ILS+ V+L+AE N   W LRPD
Sbjct: 185 LLATASFCLSVLYIVQTWIIRDYPEELVVTSICCSMVVILSAIVALIAEGNSKVWILRPD 244

Query: 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLG 298
            EL+A+ YSAI  VS+RSV +TWA RKKGP+YV+MF PLGMV+AL  G+ FLGD+LYLG
Sbjct: 245 RELVAVCYSAICVVSMRSVVYTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDSLYLG 303

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357485995|ref|XP_003613285.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355514620|gb|AES96243.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/299 (55%), Positives = 210/299 (70%), Gaps = 2/299 (0%)

Query: 2   GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP 61
           GASVTA MV ++FL+VG NT+ KAA + G S F+   YSN  A+  L+P +F ++RKR P
Sbjct: 5   GASVTATMVAVQFLEVGGNTLIKAATNDGMSIFVFTFYSNLFALCFLLPLTFFYHRKRAP 64

Query: 62  PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKL 121
           P ++ SI+CR+FLL  LS   Q+    GIE  SP LASAM+DL P FTFILA+I RME L
Sbjct: 65  PSISSSILCRMFLLSCLSTAVQILTNTGIECSSPTLASAMLDLLPAFTFILALISRMENL 124

Query: 122 ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL-VQLPL-SNWTIGGI 179
            L+  SSQAK  GTV+ I GAL VTLYKG+P+ S   +N  I    + L + S+W +G  
Sbjct: 125 NLKHHSSQAKIIGTVVSIAGALTVTLYKGIPLISDAFQNIEIGASGIHLSVKSDWILGAF 184

Query: 180 FLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPD 239
            LA  S  L++ YIVQ WI+RDYP EL+VT IC   V ILS+ V+L+AE N   W LRPD
Sbjct: 185 LLATASFCLSVLYIVQTWIIRDYPEELVVTSICCSMVVILSAIVALIAEGNSKVWILRPD 244

Query: 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLG 298
            EL+A+ YSAI  VS+RSV +TWA RKKGP+YV+MF PLGMV+AL  G+ FLGD+LYLG
Sbjct: 245 RELVAVCYSAICVVSMRSVVYTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDSLYLG 303

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086528|emb|CBI32117.3| unnamed protein product [Vitis vinifera]

 Score =  313 bits (801), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 150/270 (55%), Positives = 202/270 (74%)

Query: 32  SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIE 91
           S F+ VVYSN L++ +L+    +F+R+R PP LT SI+CRIF+LG +SC  QMF + GI 
Sbjct: 2   SDFVFVVYSNALSVPILLFCCLLFHRRRFPPPLTLSILCRIFILGFISCSTQMFLFVGIR 61

Query: 92  NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL 151
             SP LASAM DL P FTFILAII RMEKL+L+  S +AK  GT++ I GALIVT+YKG 
Sbjct: 62  YSSPTLASAMTDLVPAFTFILAIISRMEKLDLKAGSCRAKCIGTIVSIIGALIVTIYKGP 121

Query: 152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLI 211
            I  A S  K+++E ++  +SNW IGG  LA  +V +A++Y+VQ  I+RDYPAELM+T I
Sbjct: 122 QIAFASSTFKILDENLRSQISNWVIGGFLLAISAVSIALFYVVQTSIIRDYPAELMLTFI 181

Query: 212 CSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVY 271
           C IFVT+ SS VSL+AE++P+AWRL+PD+EL+A+GYSA+  ++ R   H W L KKGPV+
Sbjct: 182 CHIFVTMQSSIVSLIAERDPSAWRLKPDVELIAVGYSAVLVLAFRGTAHAWVLHKKGPVF 241

Query: 272 VSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
           V+MFKP+ +V+A+V G+ FLGD L+LG  +
Sbjct: 242 VAMFKPVAIVIAVVMGVTFLGDVLHLGSVI 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.874	0.795	0.447	6.9e-63
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.880	0.867	0.429	9.3e-59
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.913	0.824	0.416	1.9e-58
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.892	0.858	0.401	8.6e-56
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.928	0.873	0.401	2.3e-55
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.910	0.861	0.423	7e-54
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.913	0.847	0.411	2.7e-52
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.904	0.843	0.399	7.4e-50
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.886	0.736	0.358	2.1e-45
TAIR|locus:2125172	365	UMAMIT31 "Usually multiple aci	0.904	0.827	0.313	3.1e-44

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 132/295 (44%), Positives = 188/295 (63%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             A+V +E  +VGLNT+ KAA  +G S  + +VYS  LA  LL+PS F  +R RT P + +S
Sbjct:    15 ALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLPSLFCSFRSRTLPPMNFS 74

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG++ CC  +  Y GI   SP LASA+ +LTP FTF+LA++FRME +  +  S
Sbjct:    75 ILYKIVLLGIIGCCSNIMGYTGINYSSPTLASAISNLTPAFTFLLAVVFRMESVSFKRTS 134

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
             S AK  GTV+ IGGA IVTLY G P+  A S    ++   Q    NW +G  FLA     
Sbjct:   135 SVAKMLGTVVSIGGAFIVTLYNG-PVVIAKSPPS-VSLRSQSTNPNWILGAGFLAVEYFC 192

Query:   188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIG 246
             + ++YIVQ  I+R+YPAE  V    SI V+  ++ V+L  E N   AW+++P+I L++I 
Sbjct:   193 VPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDLGAWKIKPNIALVSIV 252

Query:   247 YSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
              S +F   + +  HTWALR KGP++V+MFKPL + +A+  G+ FL D+LY+G  +
Sbjct:   253 CSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFLRDSLYIGSLI 307

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 133/310 (42%), Positives = 197/310 (63%)

Query:     5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL 64
             +  AMV  EF +VG+NT+ KAA S+G S F+++VYS T    LL+P +F  +R R+ P L
Sbjct:    13 ILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFRSRSLPPL 72

Query:    65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124
             T+SI+C + +LGL++   Q+  Y GI+  SP L+SAM ++ P FTFILA++FRME + L 
Sbjct:    73 TFSILCNMGILGLIASAFQILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISLG 132

Query:   125 VQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAH 184
              +SS AK  GT+L I GAL+VTLY G  + S+ S              +W IGG  LA  
Sbjct:   133 KKSSVAKVLGTILSIIGALVVTLYHGPMLMSSHS--------------DWIIGGGLLALQ 178

Query:   185 SVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIELM 243
              +++++ Y+V A  +  YP+ ++VTL+ ++ + ++ + VSL+AEK NP AW +R DI L+
Sbjct:   179 YILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLI 238

Query:   244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCM 303
              +  + I   S   V HTWA+  KGPVY+SMFKPL +++A V    FLG++LYLG  +  
Sbjct:   239 TVVATGILN-SGYYVIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLGSVMGG 297

Query:   304 ILRGLQFLRI 313
             IL  + F  +
Sbjct:   298 ILISIGFYMV 307

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 130/312 (41%), Positives = 189/312 (60%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AMV +E + VG NT+ KAA  RG S ++ V Y+  +A  +L+P S IF R +  P     
Sbjct:    24 AMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGRSKRLPSAKTP 83

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             +   IFLL L+     +    GIE  SP LASA+ +LTP FTF LA+IFRME++ LR  +
Sbjct:    84 VFFNIFLLALVGFMSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFRMEQIVLRSSA 143

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPI-TSA----PSKN-KLINELVQLPLSNWTIGGIFL 181
             +QAK  GT++ I GAL+V LYKG  + T A    PS    L   L     S+W IGG+ L
Sbjct:   144 TQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFD-SSWIIGGLLL 202

Query:   182 AAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241
             A   ++++++YI+Q  ++  YP E+ V  + ++  T++S+ V L AEK+ N++ L+P + 
Sbjct:   203 ATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILKPGVS 262

Query:   242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
             L ++ YS     S  SV HTW L  KGPVY+S+FKPL +V+A+  G+ FLGD LYLG  +
Sbjct:   263 LASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYLGSVI 322

Query:   302 CMILRGLQFLRI 313
               ++  L F  +
Sbjct:   323 GSLILSLGFYTV 334

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 123/306 (40%), Positives = 183/306 (59%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+ +E   VG + + KAA  RG S ++ V Y+   A  +L+  S IF R R+ P    S
Sbjct:    20 AMIAIECTTVGSSILYKAATLRGFSFYVFVFYAYVGATLVLLLLSLIFGRSRSLPTAKSS 79

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             +  +IFLL LL    ++    GIE  SP L+SA+ +LTP FTFILAI FRME++ LR  +
Sbjct:    80 LFFKIFLLALLGLTSRVAGCKGIEYSSPTLSSAISNLTPAFTFILAIFFRMEQVMLRSSA 139

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187
             +QAK  GT++ I GAL++ LYKG  +  A S      E      S+W IGG+ L    ++
Sbjct:   140 TQAKIIGTIVSISGALVIVLYKGPKLLVAASFTSF--E------SSWIIGGLLLGLQFLL 191

Query:   188 LAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGY 247
             L++++I+Q  I+  YP E+ V    ++  T++S  V L+ EK+ N+W+L+P   L ++ Y
Sbjct:   192 LSVWFILQTHIMEIYPEEIAVVFCYNLCATLISGTVCLLVEKDLNSWQLKPGFSLASVIY 251

Query:   248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRG 307
             S +F  S+ SV HTW L  KGPVY+S+FKPL + +A+     FLGDTL+LG  +  ++  
Sbjct:   252 SGLFDTSLGSVIHTWGLHVKGPVYISLFKPLSIAIAVAMAAIFLGDTLHLGSVIGSVILS 311

Query:   308 LQFLRI 313
               F  +
Sbjct:   312 FGFYTV 317

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 127/316 (40%), Positives = 191/316 (60%)

Query:     3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP 62
             A +  AM+  E  +V +NT+ KAA S+G + +  ++YS  +   +L+PS    YR R+ P
Sbjct:    11 AVLLTAMLATETGNVAMNTLFKAATSKGLNSYTFLIYSYLIGSIVLLPSHIFSYRSRSLP 70

Query:    63 QLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLE 122
              L+ SI+C+I +LGLL     +  + GIE  +P LASA+ ++ P  TFILAIIFRMEK  
Sbjct:    71 SLSLSILCKIGVLGLLGSTYLITGFIGIEYSNPTLASAISNINPAITFILAIIFRMEKAS 130

Query:   123 LRVQSSQAKSFGTVLLIGGALIVTLYKGLPI--TSAPSKNKLINELVQLPLSN--WTIGG 178
              + +SS AK  GT++ + GAL+V LY G  +   S+P   +L   L+ L  SN  W IGG
Sbjct:   131 FKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPPFPQLRQLLLPLSSSNSDWIIGG 190

Query:   179 IFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLR 237
               LA    ++ + +I+QA I++ YPA   V+    +  +IL+S + +VAEKN P+ W + 
Sbjct:   191 CLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIASILTSLIGIVAEKNNPSIWIIH 250

Query:   238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYL 297
              DI L+ I    IF     ++ H WA+R KGPVY+++F+PL +++A++ G  FLGD+ YL
Sbjct:   251 FDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIFRPLSILIAVIMGAIFLGDSFYL 309

Query:   298 GRCVCMILRGLQFLRI 313
             G  V  IL  L F  +
Sbjct:   310 GSLVGGILISLGFYTV 325

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 132/312 (42%), Positives = 188/312 (60%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct:    17 AMLATETGVVGISTLFKVATSKGLNLYAFLGYSYLLASLLLLPSLFFTDRSRSLPPLSLS 76

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLGLL     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct:    77 ILSKIGLLGLLGSMYVITGYIGIEYSSPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN-ELVQLPLSN----WTIGGIFLA 182
             S AK  GT+L + GAL+V LY G P     S    IN   +  PLS+    W IGG  L 
Sbjct:   137 SVAKVMGTILSLIGALVVVLYHG-PRVFVASSPPYINFRQLSPPLSSSNSDWLIGGALLT 195

Query:   183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIE 241
                + +++ +I+QA I+  YPA   V+ +  + V+I++S + LV EKN P+ W +R DI 
Sbjct:   196 IRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSVSIVTSMIGLVVEKNNPSVWIIRFDIT 255

Query:   242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCV 301
             L+ I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V    FL D+LYLG  +
Sbjct:   256 LITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMSAVFLNDSLYLGCLI 314

Query:   302 CMILRGLQFLRI 313
               +L  L F  +
Sbjct:   315 GGLLITLGFYAV 326

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 128/311 (41%), Positives = 186/311 (59%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+ +E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R  + P L+ S
Sbjct:    20 AMLVVETSVVGISTLFKFATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSSSLPPLSVS 79

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG L     +  Y GIE  SP LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct:    80 ILSKIGLLGFLGSMYVITGYIGIEYSSPTLASAINNITPALTFILAIIFRMEKVSFKERS 139

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN----WTIGGIFLAA 183
             S AK  GT+L + GAL+V  Y G  +  A S   +       PLS+    W IGG  L  
Sbjct:   140 SLAKLMGTILSLIGALVVIFYHGPRVFLASSPPYVNFRQFSPPLSSSNSDWLIGGALLTM 199

Query:   184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIEL 242
               + +++ +I+QA I+  YPA   V+ + ++ V+I++S + LV EKN P+ W +  DI L
Sbjct:   200 QGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCVSIVTSTIGLVVEKNNPSVWIIHFDITL 259

Query:   243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302
             + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  + 
Sbjct:   260 ITIVTMAI-VTSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 318

Query:   303 MILRGLQFLRI 313
              IL  L F  +
Sbjct:   319 GILITLGFYAV 329

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 123/308 (39%), Positives = 182/308 (59%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM+  E   VGL+T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct:    17 AMLAGETSIVGLSTLFKVATSKGLNIYPFLSYSYLLASLLLLPSLFFTNRSRSLPPLSAS 76

Query:    68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
             I+ +I LLG L     +    GIE  +P LASA+ ++ P  TFILA+IFRMEK+  + +S
Sbjct:    77 ILSKIGLLGFLGSMYVITGGIGIEYSNPTLASAIGNIVPALTFILAVIFRMEKVSFKERS 136

Query:   128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN----WTIGGIFLAA 183
             S AK  GT+L + GA +V  Y G  +  A S   L    +  PLS+    W IGG  L  
Sbjct:   137 SVAKVMGTILSLIGAFVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSKSDWLIGGAILTI 196

Query:   184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIEL 242
               + +++ +I+Q  I+R+YP    V+++  + ++I++S + LV EKN P+ W +  DI L
Sbjct:   197 QGIFVSVSFILQTHIMREYPEAFTVSILYILCISIVTSMIGLVVEKNNPSIWIIHFDITL 256

Query:   243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302
               I  + I   SV  V H+WA+R K P+Y+++FKPL +++A+V G  FL D+LYLG  + 
Sbjct:   257 FTIVTTGIIT-SVYYVIHSWAIRHKRPLYLAIFKPLSILIAVVMGTIFLNDSLYLGCLIG 315

Query:   303 MILRGLQF 310
              IL  L F
Sbjct:   316 GILITLGF 323

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 111/310 (35%), Positives = 182/310 (58%)

Query:     8 AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
             AM++L+F   G+N +TK +++ G SH++LVVY + +A  ++ P +F F RK   P++T+S
Sbjct:    21 AMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERK-AQPKITFS 79

Query:    68 IVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQ 126
             I  ++F+LGLL     Q F+Y G++  SP  + AM ++ P  TFILA++FRME L+L+  
Sbjct:    80 IFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKL 139

Query:   127 SSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN---------WTIG 177
               QAK  GTV+ + GA+++T+YKG  +    +K   I +      ++         +  G
Sbjct:   140 WCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKG 199

Query:   178 GIFLAAHSVILAIYYIVQAWIVRDYPA-EL-MVTLICSIFVTILSSAVSLVAEKNPNAWR 235
              I L   ++  A  +++QA I++ Y   +L + TLIC I  T+ + AV+ V E NP+AWR
Sbjct:   200 SILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIG-TLQAVAVTFVMEHNPSAWR 258

Query:   236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTL 295
             +  D+ L+A  YS I A S+        ++K+GPV+ + F PL MV+  V G   L + +
Sbjct:   259 IGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVLAEKI 318

Query:   296 YLGRCVCMIL 305
             +LG  +  +L
Sbjct:   319 FLGGVIGAVL 328

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2125172 UMAMIT31 "Usually multiple acids move in and out Transporters 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 97/309 (31%), Positives = 171/309 (55%)

Query:    17 VGL-NTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLL 75
             +GL N + K  +  G +H ++  Y   ++   L P +F F+ ++T P LT +I+ ++F  
Sbjct:    21 LGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAF-FWERKTRPTLTLNILVQLFFS 79

Query:    76 GLLSCC-GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFG 134
              L+     Q F   G+   S  LA A I +TP  TF++A+IFR+EKL ++ ++      G
Sbjct:    80 ALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMALIFRVEKLNMKSKAGMGMVMG 139

Query:   135 TVLLIGGALIVTLYKGLPITSAPS--KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY 192
              ++ IGGAL++T+YKG+P+T       ++LIN    +   NW IG + L A S     + 
Sbjct:   140 ALICIGGALLLTMYKGVPLTKLRKLETHQLINNNHAMKPENWIIGCVLLFAGSSCFGSWM 199

Query:   193 IVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFA 252
             ++QA +   YP +   T++ S F TI  + +SL+  ++  AW L   ++++ I Y+   A
Sbjct:   200 LIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRDITAWILTDKLDIVTIVYAGAVA 259

Query:   253 VSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC--MILRGLQF 310
               + +V  +W +RK+GP++ S+F P+G++ A +F    L   ++LG  V   +++ GL  
Sbjct:   260 QGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLFDFLILHRQIFLGSVVGSGVVIFGLYI 319

Query:   311 LRINKVEIM 319
               + KV +M
Sbjct:   320 FLLGKVRLM 328

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	334
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-64
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.004

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  207 bits (528), Expect = 2e-64
 Identities = 129/308 (41%), Positives = 187/308 (60%), Gaps = 6/308 (1%)

Query: 8   AMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWS 67
           AM+  E   VG++T+ K A S+G + +  + YS  LA  LL+PS F   R R+ P L+ S
Sbjct: 17  AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS 76

Query: 68  IVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQS 127
           I+ +I LLG L     +  Y GIE  +P LASA+ ++TP  TFILAIIFRMEK+  + +S
Sbjct: 77  ILSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 128 SQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL----SNWTIGGIFLAA 183
           S AK  GT+L + GAL+V  Y G  +  A S   L    +  PL    S+W IGG  L  
Sbjct: 137 SVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTI 196

Query: 184 HSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK-NPNAWRLRPDIEL 242
             + +++ +I+QA I+ +YPA   V+ + ++ V+I++S + LV EK NP+ W +  DI L
Sbjct: 197 QGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL 256

Query: 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302
           + I   AI   SV  V H+W +R KGP+Y+++FKPL +++A+V G  FL D+LYLG  + 
Sbjct: 257 ITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315

Query: 303 MILRGLQF 310
            IL  L F
Sbjct: 316 GILITLGF 323

Length = 358

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 9/131 (6%)

Query: 18  GLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGL 77
            L  V    +    S      Y   +A  LL+    +F  ++    L+   +  +  LGL
Sbjct: 4   ALYFVFSKKLLERISPLTFTAYRFLIAGILLIL--LLFLLRKPFALLSLKAILALLYLGL 61

Query: 78  LS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTV 136
                G + +++ ++  S + AS +  L+P FT IL+++   EKL L+      +  G V
Sbjct: 62  FGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLLGIV 115

Query: 137 LLIGGALIVTL 147
           L++ G L++ L
Sbjct: 116 LILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	334
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.93
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.91
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.89
COG2962	293	RarD Predicted permeases [General function predict	99.89
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.78
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.75
COG2510	140	Predicted membrane protein [Function unknown]	99.64
COG2510	140	Predicted membrane protein [Function unknown]	99.6
KOG2766	336	consensus Predicted membrane protein [Function unk	99.59
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.57
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.48
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.46
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.45
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.43
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.31
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.25
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.25
KOG1580	337	consensus UDP-galactose transporter related protei	99.2
PRK11272	292	putative DMT superfamily transporter inner membran	99.1
PRK15430	296	putative chloramphenical resistance permease RarD;	99.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.07
KOG1581	327	consensus UDP-galactose transporter related protei	99.07
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.03
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.03
PRK11689	295	aromatic amino acid exporter; Provisional	99.02
PLN00411	358	nodulin MtN21 family protein; Provisional	98.99
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.95
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.94
PRK13499	345	rhamnose-proton symporter; Provisional	98.91
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.87
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.85
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.82
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.8
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.79
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.72
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.65
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.54
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.54
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.51
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.5
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.5
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.49
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.45
COG2962	293	RarD Predicted permeases [General function predict	98.33
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.3
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.21
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.21
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.18
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.03
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.97
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.93
KOG1582	367	consensus UDP-galactose transporter related protei	97.91
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.89
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.69
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.69
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.67
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.65
PRK11431	105	multidrug efflux system protein; Provisional	97.57
COG2076	106	EmrE Membrane transporters of cations and cationic	97.47
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.45
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.34
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.25
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.19
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.15
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.1
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.09
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.06
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.99
COG2076	106	EmrE Membrane transporters of cations and cationic	96.99
PRK11431	105	multidrug efflux system protein; Provisional	96.9
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.8
PRK13499	345	rhamnose-proton symporter; Provisional	96.45
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.87
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.64
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.62
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.37
KOG1581	327	consensus UDP-galactose transporter related protei	95.14
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.08
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.98
KOG2765	416	consensus Predicted membrane protein [Function unk	94.85
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.51
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.31
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.05
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	92.76
KOG1443	349	consensus Predicted integral membrane protein [Fun	91.75
KOG1580	337	consensus UDP-galactose transporter related protei	91.74
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	90.4
KOG4831	125	consensus Unnamed protein [Function unknown]	89.46
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	83.84
PRK02237	109	hypothetical protein; Provisional	81.94

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=5e-40  Score=306.00  Aligned_cols=311  Identities=39%  Similarity=0.631  Sum_probs=250.1

Q ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHH
Q 019865            1 MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSC   80 (334)
Q Consensus         1 ~~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   80 (334)
                      |+.|+|+.|+...++.+...++.|.+++.+++|..+.++|+.+++++++++.+.++|+++.++.+++++.+..+.|++++
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999987654433324456777888888999887


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHH------hhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCC
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIF------RMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT  154 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~------~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~  154 (334)
                      .++.++++|++|+|+++++++.++.|+++.++++++      +|||++++      +++|++++++|+.++...+++...
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~  163 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVF  163 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcccc
Confidence            777899999999999999999999999999999999      58888888      999999999999998554442211


Q ss_pred             CCCCCcccc---ccc-ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865          155 SAPSKNKLI---NEL-VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN  230 (334)
Q Consensus       155 ~~~~~~~~~---~~~-~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~  230 (334)
                      ..++++..+   +.. ....+.++..|+++.+.++++|++|++.+|+..+++++....++++..++++...+.++..+++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~  243 (358)
T PLN00411        164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN  243 (358)
T ss_pred             cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence            100000000   000 0112234567999999999999999999999999987456777888888888777777665542


Q ss_pred             -CCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhh
Q 019865          231 -PNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQ  309 (334)
Q Consensus       231 -~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g  309 (334)
                       ...|....+.....++|.++. +.++|.+|+|++++.||++++++.+++|+++++++++++||++++.+++|+++|+.|
T Consensus       244 ~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~G  322 (358)
T PLN00411        244 NPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLG  322 (358)
T ss_pred             CcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence             223332223345567788875 668999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhH
Q 019865          310 FLRINKVEI  318 (334)
Q Consensus       310 ~~l~~~~~~  318 (334)
                      +++..+.++
T Consensus       323 v~l~~~~~~  331 (358)
T PLN00411        323 FYAVMWGKA  331 (358)
T ss_pred             HHHHHhhhh
Confidence            999875443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=2.9e-34  Score=262.38  Aligned_cols=277  Identities=17%  Similarity=0.164  Sum_probs=230.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQM   84 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~   84 (334)
                      ++.++...++||++++++|.+. +++||..++++|+.+++++++++...+++ +   ..+++++.+....|.++ ..++.
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~---~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGH-P---LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCC-C---CCcHHHHHHHHHHHHHHHHHHHH
Confidence            4567788999999999999854 58999999999999999998888654322 1   12455667778888887 78889


Q ss_pred             HHHHHh-hccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 019865           85 FHYFGI-ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI  163 (334)
Q Consensus        85 ~~~~al-~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~  163 (334)
                      +++++. +++++++++++.++.|+++.+++.+ +|||++++      +++|++++++|+.++.. ++             
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~-------------  143 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GG-------------  143 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Cc-------------
Confidence            999999 9999999999999999999999985 69999999      99999999999998731 11             


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhh
Q 019865          164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELM  243 (334)
Q Consensus       164 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~  243 (334)
                            ..+....|+++.++++++||.|.+..||..++ + +...+.+++.++++...+.....+.++..  ..+...|.
T Consensus       144 ------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  213 (292)
T PRK11272        144 ------NLSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFL  213 (292)
T ss_pred             ------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHH
Confidence                  01123579999999999999999999987643 2 45567788888888888877654433211  11224788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       244 ~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      .+++.++++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.+.+++
T Consensus       214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999999999999999999999999999998876554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=3.8e-34  Score=261.91  Aligned_cols=284  Identities=11%  Similarity=0.024  Sum_probs=215.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-H
Q 019865            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C   80 (334)
Q Consensus         2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   80 (334)
                      +.|+++.++.++++||++++.+|.+. +++||..+.++|+.++++++.++.   ++++. ++.+    ++....+.++ +
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~-~~~~----~~~~~~~~l~~~   72 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GFPRL-RQFP----KRYLLAGGLLFV   72 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---ccccc-cccc----HHHHHHHhHHHH
Confidence            67889999999999999999999964 689999999999999999887653   11111 1111    2233445555 7


Q ss_pred             HHHHHHHHHhhc----cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCC
Q 019865           81 CGQMFHYFGIEN----GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA  156 (334)
Q Consensus        81 ~~~~~~~~al~~----~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~  156 (334)
                      .++.+++.++++    +++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++. .+++.... 
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~-~~~~~~~~-  144 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVL-GGDNGLSL-  144 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhhee-cCCccchh-
Confidence            888888888764    67888999999999999999999999999999      9999999999999883 21110000 


Q ss_pred             CCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 019865          157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL  236 (334)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~  236 (334)
                            .+  .+....+...|+++++.++++||.|++..||..++.+ +....   ...+++.+.+.....+.++..++ 
T Consensus       145 ------~~--~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~~~~~~~~~~-  211 (295)
T PRK11689        145 ------AE--LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFLSPQPAMVFS-  211 (295)
T ss_pred             ------hh--hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHHhcCccccCC-
Confidence                  00  0001112356999999999999999999999987765 65432   22333334443333222211121 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                        ...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++....
T Consensus       212 --~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        212 --LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             --HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence              236777788885 89999999999999999999999999999999999999999999999999999999999887655


Q ss_pred             hH
Q 019865          317 EI  318 (334)
Q Consensus       317 ~~  318 (334)
                      ++
T Consensus       289 ~~  290 (295)
T PRK11689        289 TR  290 (295)
T ss_pred             Hh
Confidence            54

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=8.1e-34  Score=260.31  Aligned_cols=280  Identities=16%  Similarity=0.072  Sum_probs=218.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (334)
                      +..+..++++++||++++++|.+. +++||..+.++|+.++++.+.++.   .+    ++.+++   .....|.+. ..+
T Consensus         4 ~~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~---~~----~~~~~~---~~~~~g~~~~~~~   72 (299)
T PRK11453          4 KDGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFV---AR----PKVPLN---LLLGYGLTISFGQ   72 (299)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHh---cC----CCCchH---HHHHHHHHHHHHH
Confidence            445668889999999999999965 579999999999999887666543   11    112222   334445555 566


Q ss_pred             HHHHHHHhhc-cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 019865           83 QMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK  161 (334)
Q Consensus        83 ~~~~~~al~~-~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~  161 (334)
                      +.+++.+++| .++++++++.++.|+++.+++++++|||++++      +++|++++++|+.++. ..+.          
T Consensus        73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~-~~~~----------  135 (299)
T PRK11453         73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLI-EDSL----------  135 (299)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhc-cccC----------
Confidence            6788899998 58899999999999999999999999999999      9999999999999883 1110          


Q ss_pred             cccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHHHHHhccCCC---Ccccc
Q 019865          162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE--LMVTLICSIFVTILSSAVSLVAEKNP---NAWRL  236 (334)
Q Consensus       162 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~--~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~~  236 (334)
                            + ..+....|+++++.++++|+.|++..|+..++.+++  .....+....+.+.....+...+++.   ..+..
T Consensus       136 ------~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (299)
T PRK11453        136 ------N-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT  208 (299)
T ss_pred             ------C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence                  0 112224799999999999999999999987654422  34445556665554554444444321   11111


Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      .+...|..++|.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            22347889999999999999999999999999999999999999999999999999999999999999999999987765


Q ss_pred             hH
Q 019865          317 EI  318 (334)
Q Consensus       317 ~~  318 (334)
                      ++
T Consensus       289 ~~  290 (299)
T PRK11453        289 LR  290 (299)
T ss_pred             hh
Confidence            54

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=5.2e-32  Score=247.93  Aligned_cols=274  Identities=14%  Similarity=0.083  Sum_probs=205.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC-CCC-CcHHHHHHHHHHHHHH
Q 019865            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT-PPQ-LTWSIVCRIFLLGLLS   79 (334)
Q Consensus         2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~   79 (334)
                      +.|+++++++++++||.+++..|. . +++||.++.++|+.++.+++.++...+++.+. .++ .+++++. ....+.++
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~k~-~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   82 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYFKL-I-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAVL   82 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH-h-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHHH
Confidence            467899999999999999999998 4 47999999999999999888777654322110 001 1233322 33355555


Q ss_pred             -HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865           80 -CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS  158 (334)
Q Consensus        80 -~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~  158 (334)
                       +.++.++++|++++|+++++++.++.|+++.+++++++|||++++      +++|++++++|+.++...          
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~----------  146 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWT----------  146 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHH----------
Confidence             889999999999999999999999999999999999999999999      999999999999998311          


Q ss_pred             CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 019865          159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR  237 (334)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~  237 (334)
                                 .++.    ..+.++++++|+.|++..|+..++.. +....+.+...++.+...+..   +.+...+.. 
T Consensus       147 -----------~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-  207 (296)
T PRK15430        147 -----------FGSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQ-  207 (296)
T ss_pred             -----------cCCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccC-
Confidence                       0111    14688899999999999988754321 123334455555544332221   111111111 


Q ss_pred             CCch-hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          238 PDIE-LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       238 ~~~~-~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      .+.. +..+.+.|+ .+.++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+.+..
T Consensus       208 ~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        208 NPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             CcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            1112 233344555 688999999999999999999999999999999999999999999999999999977665544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=7.2e-32  Score=242.44  Aligned_cols=257  Identities=18%  Similarity=0.179  Sum_probs=217.9

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccC
Q 019865           16 DVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGS   94 (334)
Q Consensus        16 wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~   94 (334)
                      ||.+++..|.+.+++.||....++|+..+.+++.+....+    +    +++++.+....|.++ ++++.++++|++|++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~----~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~   72 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR----P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLP   72 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc----c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            8999999999777789999999999999988887765321    1    233446777888888 999999999999999


Q ss_pred             chhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcch
Q 019865           95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNW  174 (334)
Q Consensus        95 ~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (334)
                      +++++++.++.|+++.+++.+++|||++++      ++.|+.++++|+.++. .++                   +.+..
T Consensus        73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~-~~~-------------------~~~~~  126 (260)
T TIGR00950        73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLL-SDG-------------------NLSIN  126 (260)
T ss_pred             hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhc-cCC-------------------ccccc
Confidence            999999999999999999999999999999      9999999999999973 111                   11233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHH
Q 019865          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAV  253 (334)
Q Consensus       175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t  253 (334)
                      ..|+++++.++++|+.+.+..|+..++.+. +...+.+++.++.++..+.....++.+ ..   +...+..+++.+++++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence            689999999999999999999999877651 234445778888888888876554322 11   2346777889999999


Q ss_pred             HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhH
Q 019865          254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQF  310 (334)
Q Consensus       254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~  310 (334)
                      +++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999886

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=9.4e-32  Score=245.91  Aligned_cols=273  Identities=13%  Similarity=0.037  Sum_probs=217.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHH
Q 019865            2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCC   81 (334)
Q Consensus         2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   81 (334)
                      +.+++.++++++++|+.++.+.|.+.+ +.||..+.++|+++++++++++...  ++   ++.++++++.....|++...
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~~---~~~~~~~~~~~~~~g~~~~~   83 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--WR---LRFAKEQRLPLLFYGVSLGG   83 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--Hh---ccCCHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999664 6999999999999999888776422  11   12345566677788887777


Q ss_pred             HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 019865           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK  161 (334)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~  161 (334)
                      .+.+++++++|+|++.++++.++.|+++.+++    +|+++        +..++.++++|+.++. ..+..         
T Consensus        84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~-~~~~~---------  141 (293)
T PRK10532         84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLL-PLGQD---------  141 (293)
T ss_pred             HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheee-ecCCC---------
Confidence            78899999999999999999999999998876    35443        3455778899998873 11110         


Q ss_pred             cccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCch
Q 019865          162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE  241 (334)
Q Consensus       162 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~  241 (334)
                              .++....|+++.++++++|+.|++..|+..++.+ +... .++.+++++...+.....+.. ..++   ...
T Consensus       142 --------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~~---~~~  207 (293)
T PRK10532        142 --------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE-ALWH---WSI  207 (293)
T ss_pred             --------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc-ccCC---HHH
Confidence                    1122357999999999999999999999987776 6665 456677777777776544321 1111   124


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       242 ~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      +..++|.|+++++++|.+|++++++.++++++.+.++||+++.+++++++||++++.+++|+++|+.|+......
T Consensus       208 ~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        208 LPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            556679999999999999999999999999999999999999999999999999999999999999988877643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.97  E-value=2.1e-28  Score=222.50  Aligned_cols=273  Identities=14%  Similarity=0.107  Sum_probs=201.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFY-RKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (334)
                      +...+.++++|+..++..|... ++.++  ..+++...+++.+.|+...+. ++.+ ++.+++.+......+..+..++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGW-SRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCC-CCcchhhHHHHHHHHHHHHHHHH
Confidence            4567889999999999999633 33344  357777778777877765432 2222 22233333344444444499999


Q ss_pred             HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCccccc
Q 019865           85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN  164 (334)
Q Consensus        85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~  164 (334)
                      ++++|++++++++++.+.++.|+++.+++++++|||++++      +++|+.+++.|+.++.. ++              
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~--------------  137 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SR--------------  137 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-cc--------------
Confidence            9999999999999999999999999999999999999999      99999999999998732 11              


Q ss_pred             ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchH----HHHHHHHHHHHHHHHHHHHhccCCCCcccccCCc
Q 019865          165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAEL----MVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI  240 (334)
Q Consensus       165 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~----~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~  240 (334)
                           ..+....|+.+++.++++|+.|++..|+..++.+ +.    ..+.+++...+....+.....+..+  .. .++.
T Consensus       138 -----~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~  208 (281)
T TIGR03340       138 -----FAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PYAR  208 (281)
T ss_pred             -----ccccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hhHH
Confidence                 0111246888999999999999999887654443 22    1223333332222222221112111  11 1122


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865          241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR  312 (334)
Q Consensus       241 ~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l  312 (334)
                      .+...++.+.+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus       209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            455677888889999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.6e-28  Score=225.72  Aligned_cols=269  Identities=12%  Similarity=0.088  Sum_probs=210.4

Q ss_pred             HHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhh
Q 019865           20 NTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALAS   99 (334)
Q Consensus        20 ~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~   99 (334)
                      .+.-|.++++--+|..+.++|+..+.+.+.+... .+.+++ ++.+++++++....|++++.++.+.+++++|+++++++
T Consensus        18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~   95 (302)
T TIGR00817        18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH   95 (302)
T ss_pred             HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            3567886643367999999999999877655521 122222 45677888899999999988899999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHH
Q 019865          100 AMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGI  179 (334)
Q Consensus       100 ~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  179 (334)
                      ++.++.|+++.+++++++|||++++      ++.|++++++|+.+..   ..                  +.+....|++
T Consensus        96 li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~------------------~~~~~~~G~~  148 (302)
T TIGR00817        96 TIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DT------------------ELSFNWAGFL  148 (302)
T ss_pred             HHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CC------------------cccccHHHHH
Confidence            9999999999999999999999999      9999999999998652   10                  1122357999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhccCCCC---cccc----cCC-chhhHHHHHH
Q 019865          180 FLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRL----RPD-IELMAIGYSA  249 (334)
Q Consensus       180 ~~l~aa~~~a~~~v~~~~~~~--~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~---~~~~----~~~-~~~~~ll~~g  249 (334)
                      ++++++++|++|++..||..+  +++ +...+.++...+++.+.|.....|+.+.   ++..    ... ..+...++.+
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA  227 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence            999999999999999999887  676 8999999999999999998876654211   1110    000 0111122222


Q ss_pred             HHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       250 i~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      +......+.++++++++.+|++.+...+++|++++++|++++||++++.+++|+++++.|+++.++.|+
T Consensus       228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            222222224556899999999999999999999999999999999999999999999999999887654

specificities overlap.

>TIGR00688 rarD rarD protein

Probab=99.96  E-value=3.9e-27  Score=211.41  Aligned_cols=250  Identities=10%  Similarity=0.042  Sum_probs=185.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCC-cHHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQL-TWSIVCRIFLLGL   77 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~-~~~~~~~~~~~g~   77 (334)
                      .|++..++.++++||.++++.|. .. ++||.++.++|++++++++.++...+++++    +.++. +++.+..+...|+
T Consensus         1 ~~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         1 FKGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            36899999999999999999998 44 699999999999999988877765433211    10111 1222344667777


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCC
Q 019865           78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAP  157 (334)
Q Consensus        78 ~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~  157 (334)
                      +.+.++.++++|++++++++++++.++.|+++++++++++|||++++      ++++++++++|+.++...         
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~---------  143 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVL---------  143 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHH---------
Confidence            77999999999999999999999999999999999999999999999      999999999999987321         


Q ss_pred             CCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 019865          158 SKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR  237 (334)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~  237 (334)
                                  .++.    ..+++.++++|+.|.+..|+..++ + ....... .+...+...+.... ++++......
T Consensus       144 ------------~~~~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~  203 (256)
T TIGR00688       144 ------------KGSL----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQ-TDFATVQQTN  203 (256)
T ss_pred             ------------cCCc----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHH-hccCcccccC
Confidence                        0111    135788999999999999887543 2 2222111 12222222222111 1111111111


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHH
Q 019865          238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF  290 (334)
Q Consensus       238 ~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~  290 (334)
                      +..+|..+++.|+. +.++|.+|++++++.++++++++.|++|+++.+++.++
T Consensus       204 ~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       204 PFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             chhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            12367888888875 88999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=1.7e-25  Score=208.99  Aligned_cols=269  Identities=14%  Similarity=0.118  Sum_probs=210.6

Q ss_pred             HHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019865           17 VGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL--TWSIVCRIFLLGLLSCCGQMFHYFGIENG   93 (334)
Q Consensus        17 g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~   93 (334)
                      .......|.++ +++| |..+..+|++++.++..++... +.+++ ++.  .+++++.....|+++.......+.|++++
T Consensus        62 ~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~  138 (350)
T PTZ00343         62 VLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKI-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLG  138 (350)
T ss_pred             HHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            34456678755 5699 9999999999998875555332 22222 333  23466788899999944456677999999


Q ss_pred             CchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcc
Q 019865           94 SPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN  173 (334)
Q Consensus        94 ~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (334)
                      +++.+.++..+.|+++++++++++|||++++      ++.++++++.|+.+.+.  +                   +.+.
T Consensus       139 svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~-------------------~~~~  191 (350)
T PTZ00343        139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K-------------------ELHF  191 (350)
T ss_pred             cHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c-------------------cchh
Confidence            9999999999999999999999999999999      99999999999999731  1                   1122


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhCC------chHHHHHHHHHHHHHHHHHHHHhccCCC--Ccc----cccCCch
Q 019865          174 WTIGGIFLAAHSVILAIYYIVQAWIVRDYP------AELMVTLICSIFVTILSSAVSLVAEKNP--NAW----RLRPDIE  241 (334)
Q Consensus       174 ~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~------~~~~~~~~~~l~~~i~~~~~~l~~~~~~--~~~----~~~~~~~  241 (334)
                      ...|++++++++++|+.|++..|+..++.+      ++.....++...++++..|+....|...  ..+    .......
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            367999999999999999999999876532      2555666678899999999887665421  111    0001112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH----HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          242 LMAIGYSAIFAVSVRSVFHTW----ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       242 ~~~ll~~gi~~t~~~~~l~~~----al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      +..+++. ++.+++.|.+|+.    ++++.+|.+.+...++.|+++++++++++||++++.+++|+++++.|+++.+..
T Consensus       272 ~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        272 KGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            3344454 5577999999995    999999999999999999999999999999999999999999999999988754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=1.7e-24  Score=196.88  Aligned_cols=278  Identities=21%  Similarity=0.242  Sum_probs=212.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-H
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRG-ASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C   80 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~   80 (334)
                      .+.....++..+.|+.+....|... ++ .++....+.|...+.+...+.....+...+ +...+  +++....+.++ .
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~   81 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-PALRP--WLLLLLLALLGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhccccc-ccccc--hHHHHHHHHHHHH
Confidence            3456777888899999999999954 44 677777788999998874433321110011 11111  34556666666 9


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHH-HHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAI-IFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK  159 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~-~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~  159 (334)
                      .++.+++.++++++++.++.+.++.|+++.+++. +++|||++++      ++.++++++.|++++.. .+.        
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~-~~~--------  146 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL-GGG--------  146 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec-CCC--------
Confidence            9999999999999999999999999999999997 6779999999      99999999999999832 110        


Q ss_pred             cccccccccCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhccCCCCccccc
Q 019865          160 NKLINELVQLPLSN-WTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL-ICSIFVTILSSAVSLVAEKNPNAWRLR  237 (334)
Q Consensus       160 ~~~~~~~~~~~~~~-~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~l~~~~~~~~~~~~  237 (334)
                                .+.. ...|+.+++.++++|+.+.+..|+.. +.+ +..... +++........+.. ..+.+    ...
T Consensus       147 ----------~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~  209 (292)
T COG0697         147 ----------GGGILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFF-LSGFG----API  209 (292)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHH-hcccc----ccC
Confidence                      0111 46899999999999999999999887 554 555554 44442222222222 11111    111


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       238 ~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      ....+..+.+.|+++++++|.+|.+++++.++++++++.+++|+++.+++++++||++++.+++|+.+++.|+.+..++
T Consensus       210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            1236888889999999999999999999999999999999999999999999999999999999999999999988876

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.93  E-value=7.1e-24  Score=194.02  Aligned_cols=284  Identities=15%  Similarity=0.159  Sum_probs=215.5

Q ss_pred             HHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019865           12 LEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGI   90 (334)
Q Consensus        12 ~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al   90 (334)
                      .+++=..+.+.+....+++.+ |..-.++-+..-.++..++..+++++++..+..++++++.++.|++...++.+...|+
T Consensus        21 lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~  100 (334)
T PF06027_consen   21 LSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAY  100 (334)
T ss_pred             HHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            344445555555542334444 5555555555555555555554433211122234556788889999999999999999


Q ss_pred             hccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCC
Q 019865           91 ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLP  170 (334)
Q Consensus        91 ~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~  170 (334)
                      +||+.+.+.++..++-+++++++++++|||.++.      |++|+++++.|+.++...+....            +++.+
T Consensus       101 ~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~------------~~~~~  162 (334)
T PF06027_consen  101 QYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSG------------SDSSS  162 (334)
T ss_pred             hcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccc------------ccCCC
Confidence            9999999999999999999999999999999999      99999999999998854321110            01123


Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCC-CcccccCCchhhHHHHHH
Q 019865          171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIGYSA  249 (334)
Q Consensus       171 ~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~-~~~~~~~~~~~~~ll~~g  249 (334)
                      .++..+||++++.+++.||+++++.++..|+.+ ......+..+++.++..+...+.|.+. ...+  ++..........
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~--w~~~~~~~~v~~  239 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH--WTSQVIGLLVGY  239 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC--CChhhHHHHHHH
Confidence            455689999999999999999999999999987 888999999999999998887777642 1121  222222232223


Q ss_pred             HHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       250 i~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      .++...-|.+....++..+|+..++......+++++++++++||++++.+++|.++|+.|+++.+..
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            3466677888899999999999999999999999999999999999999999999999999988743

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.91  E-value=1.4e-22  Score=184.71  Aligned_cols=273  Identities=15%  Similarity=0.126  Sum_probs=206.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (334)
                      +++..++++++||++.+..|. .. +.++.++.  |..++.+++..+....+++++   ..++.+...++.|.+...++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~-~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~---~~~~~~~~g~l~G~~w~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVK-IG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF---WALSIFLVGLLSGAFWALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhc-cC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc---cccHHHHHHHHHHHHHHhhhh
Confidence            577889999999999999998 44 78888775  788888877766555432111   124444456666666688999


Q ss_pred             HHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccch----hhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865           85 FHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAK----SFGTVLLIGGALIVTLYKGLPITSAPSK  159 (334)
Q Consensus        85 ~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~----~~g~~l~l~Gv~ll~~~~~~~~~~~~~~  159 (334)
                      +++.++++++.+.+..+.+ ++|++..+++.+++|||.+++      +    .+|+++.++|+.++...+++        
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~--------  140 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDK--------  140 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccc--------
Confidence            9999999999999999988 888999999999999999999      8    99999999998887321100        


Q ss_pred             cccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH---HHHHHHHHHHHHHHHhccCCCCcccc
Q 019865          160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL---ICSIFVTILSSAVSLVAEKNPNAWRL  236 (334)
Q Consensus       160 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~---~~~l~~~i~~~~~~l~~~~~~~~~~~  236 (334)
                           ...+.+..+..+|.++.+.++++|+.|.+..|+.  +++ |.+.++   +.++.++.+..+.. . ...+  +. 
T Consensus       141 -----~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~--~~-  207 (290)
T TIGR00776       141 -----SAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH-I-LAKP--LK-  207 (290)
T ss_pred             -----ccccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH-h-cccc--hH-
Confidence                 0000000234679999999999999999999976  455 777743   33444444333322 1 1111  11 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEeccchHHHHHHHHHHHHhCCcccchhh----hhhHHHHhhHH
Q 019865          237 RPDIELMAIGYSAIFAVSVRSVFHTWALR-KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC----VCMILRGLQFL  311 (334)
Q Consensus       237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~-~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~----iG~~lIi~g~~  311 (334)
                       ++..+..++ .|++ ..+++.+|..+.+ +.++++.+.+.+++|+.+.+++++++||+.++.++    +|+++|+.|+.
T Consensus       208 -~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       208 -KYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             -HHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence             122344444 8887 7999999999999 99999999999999999999999999999999999    99999999988


Q ss_pred             hhh
Q 019865          312 RIN  314 (334)
Q Consensus       312 l~~  314 (334)
                      +..
T Consensus       285 l~~  287 (290)
T TIGR00776       285 ILG  287 (290)
T ss_pred             HHh
Confidence            764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.89  E-value=2.1e-21  Score=165.59  Aligned_cols=273  Identities=14%  Similarity=0.064  Sum_probs=215.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (334)
                      |+.+++.+.+.-=....+.|. +-+..+|...+.+|..++++.+.++..    ..+ .+.+++++......|...+..|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~-LFP~vG~~g~t~lRl~~aaLIll~l~R----Pwr-~r~~~~~~~~~~~yGvsLg~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKS-LFPLVGAAGVTALRLAIAALILLALFR----PWR-RRLSKPQRLALLAYGVSLGGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHH-HccccChhhHHHHHHHHHHHHHHHHhh----HHH-hccChhhhHHHHHHHHHHHHHHH
Confidence            577777777766666777887 557899999999999999998887742    222 35667777899999998888899


Q ss_pred             HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCccccc
Q 019865           85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN  164 (334)
Q Consensus        85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~  164 (334)
                      +||.++++.|.+.+..+.++-|+...+++.    +|  .+      +.+-+.+.+.|+.++. ..++.            
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~------d~vwvaLAvlGi~lL~-p~~~~------------  141 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LR------DFVWVALAVLGIWLLL-PLGQS------------  141 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hh------hHHHHHHHHHHHHhhe-eccCC------------
Confidence            999999999999999999999998887753    22  23      6666778888988882 21111            


Q ss_pred             ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhH
Q 019865          165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMA  244 (334)
Q Consensus       165 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~  244 (334)
                           .......|..+.+.++.+|+.|.+..+|..+..+ ....+...+.+++++..|+.....++ .-++   +.-...
T Consensus       142 -----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~-~l~~---p~ll~l  211 (292)
T COG5006         142 -----VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP-ALFS---PSLLPL  211 (292)
T ss_pred             -----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch-hhcC---hHHHHH
Confidence                 1223478999999999999999999999876554 67778889999999999998643332 1121   123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHH---hhhhhhH
Q 019865          245 IGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFL---RINKVEI  318 (334)
Q Consensus       245 ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~---l~~~~~~  318 (334)
                      -+..+++++.+.|.+=..+++|.++...+.+..+||.++.+.+++++||.+|+.|++|...|+.+..   +..|++.
T Consensus       212 aLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         212 ALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            5678999999999999999999999999999999999999999999999999999999998886543   4444443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.89  E-value=1.2e-20  Score=165.06  Aligned_cols=276  Identities=12%  Similarity=0.077  Sum_probs=219.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCcHHHHHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--QLTWSIVCRIFLLGLLSC   80 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~   80 (334)
                      .|+++..+.+.++||..+...|. + ++.|+.++...|..-+..++..+....++++...  ..+++.+....+.+.+-+
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kl-l-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKL-L-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-H-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            58999999999999999999999 4 4799999999999999988877766654432201  123444555656666669


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN  160 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~  160 (334)
                      .++..|.||.++-..-++++=++.+|++.++++.+++|||+++-      |++++.++.+||.......|          
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g----------  147 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG----------  147 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC----------
Confidence            99999999999999999999999999999999999999999999      99999999999999854322          


Q ss_pred             ccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccc-cCC
Q 019865          161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL-RPD  239 (334)
Q Consensus       161 ~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~-~~~  239 (334)
                                +-.     ...+.-+++|+.|-...|+.  +.+ +.+..+...+.-.+......+..+..++ ... ...
T Consensus       148 ----------~lp-----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~-~~~~~~~  208 (293)
T COG2962         148 ----------SLP-----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQ-FLQQNAN  208 (293)
T ss_pred             ----------CCc-----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCch-hhhcCCc
Confidence                      122     24555678999999776654  333 5566666666666655555555544332 111 123


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       240 ~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      ..+..+...|. .|+++..+|..+-|+++-+..+.++|++|..-.+++.+++||+++..+....+.|-.|+.+..-+
T Consensus       209 ~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         209 SLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             hHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35666777787 78899999999999999999999999999999999999999999999999999999998887644

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.86  E-value=2.3e-22  Score=172.55  Aligned_cols=287  Identities=14%  Similarity=0.133  Sum_probs=208.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMF   85 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   85 (334)
                      .....+. ..+....+..+...  +.+|.+..-.|++.-.+.-.|...+.+....-|+ ..|  .++.++|+.|..+..+
T Consensus        40 l~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~-g~R--~~LiLRg~mG~tgvml  113 (346)
T KOG4510|consen   40 LLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE-GKR--KWLILRGFMGFTGVML  113 (346)
T ss_pred             ceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC-CcE--EEEEeehhhhhhHHHH
Confidence            3334444 45555555555523  5899999999966555544444333222221122 222  3677899999888889


Q ss_pred             HHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccc
Q 019865           86 HYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINE  165 (334)
Q Consensus        86 ~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~  165 (334)
                      .||+++|.|.+.|.++..++|+++.+++|.++||+.++.      ..++..+.+.|+++++   .+      +..-++++
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv---RP------pFlFG~~t  178 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV---RP------PFLFGDTT  178 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe---cC------CcccCCCc
Confidence            999999999999999999999999999999999999999      9999999999999983   11      11111111


Q ss_pred             c--ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC-Cchh
Q 019865          166 L--VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP-DIEL  242 (334)
Q Consensus       166 ~--~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~-~~~~  242 (334)
                      .  ..+..+....|...++.+++..|--.++.|+..|+.+ ......+..+++.+...+.-...+    ++..+. ..++
T Consensus       179 ~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr  253 (346)
T KOG4510|consen  179 EGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDR  253 (346)
T ss_pred             cccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCccccce
Confidence            1  1111233456788888888888888889999988886 544455555666655544433322    122211 2366


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865          243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIM  319 (334)
Q Consensus       243 ~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~  319 (334)
                      +.++.+|++ ..+++.+...++|+-.+..+++..+.+.+++.+|..+++||.|+++.+.|+++|+++.+.+..+|..
T Consensus       254 ~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  254 WLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             EEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence            677778884 4678999999999999999999999999999999999999999999999999999988877766654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.78  E-value=3.5e-18  Score=153.62  Aligned_cols=229  Identities=16%  Similarity=0.183  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcC
Q 019865           71 RIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKG  150 (334)
Q Consensus        71 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~  150 (334)
                      ..+....+...+++++..|+++++++...++.+++.+|+..++.++..||++..      |.++.++++.|+++++..+ 
T Consensus       161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~-  233 (416)
T KOG2765|consen  161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGD-  233 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecc-
Confidence            344444455999999999999999999999999999999999999999999999      9999999999999985321 


Q ss_pred             CCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC---chHHHHHHHHHHHHHHHHHHHHhc
Q 019865          151 LPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVA  227 (334)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~l~~  227 (334)
                      ...            ..+........|+++++++|+.||+|+++.||...+.+   |....-.+..++..++++|...+.
T Consensus       234 s~~------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL  301 (416)
T KOG2765|consen  234 SKQ------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL  301 (416)
T ss_pred             ccc------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence            110            01112334588999999999999999999999877653   233344455566666677655544


Q ss_pred             cC-CCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHH
Q 019865          228 EK-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILR  306 (334)
Q Consensus       228 ~~-~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lI  306 (334)
                      .. ..+.++.+.......++..++++++++-++|.+|+--.+|..++.-..++.+.+++.+.++=|..+++.+++|.+.|
T Consensus       302 ~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~I  381 (416)
T KOG2765|consen  302 DFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPI  381 (416)
T ss_pred             HHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence            32 12344555555677788899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhHHhhhhhhH
Q 019865          307 GLQFLRINKVEI  318 (334)
Q Consensus       307 i~g~~l~~~~~~  318 (334)
                      ++|.+.++...+
T Consensus       382 fv~Fv~vn~~~~  393 (416)
T KOG2765|consen  382 FVGFVIVNISSE  393 (416)
T ss_pred             HHHHhheecccc
Confidence            999999886544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.75  E-value=9.2e-16  Score=141.00  Aligned_cols=265  Identities=11%  Similarity=0.099  Sum_probs=203.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHH
Q 019865           33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL  112 (334)
Q Consensus        33 p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~ll  112 (334)
                      |..+++..+....+.-.+.....+++.    .++..+++....+.+..++..+-+.+++|.|...-.++-++.|+.++++
T Consensus        32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~  107 (303)
T PF08449_consen   32 PLFLTFVQFAFNALFSFILLSLFKFPK----SRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL  107 (303)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhccccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence            888999999988877666654433111    1222335667778888899999999999999999999999999999999


Q ss_pred             HHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHH
Q 019865          113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY  192 (334)
Q Consensus       113 a~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~  192 (334)
                      +.+++|+|.+++      +++++++..+|+.+....+.....           ..+....++..|+++.+.+.++.+...
T Consensus       108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~-----------~~~~~~~~~~~G~~ll~~sl~~~a~~~  170 (303)
T PF08449_consen  108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS-----------SSNSSSFSSALGIILLLLSLLLDAFTG  170 (303)
T ss_pred             HHHhcCccccHH------HHHHHHHHHhhHheeeeccccccc-----------ccccccccchhHHHHHHHHHHHHHHHH
Confidence            999999999999      999999999999998543211110           011112223449999999999999999


Q ss_pred             HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh--ccCCCCccc--ccCCchhhHHHHHHHHHHHHHHHHHHHHhccC
Q 019865          193 IVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLV--AEKNPNAWR--LRPDIELMAIGYSAIFAVSVRSVFHTWALRKK  267 (334)
Q Consensus       193 v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~--~~~~~~~~~--~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~  267 (334)
                      +.+++..++++ ++.+.+++..+++.+...+....  .++..+.++  ...+..+..++... +...+++....+..++.
T Consensus       171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~  249 (303)
T PF08449_consen  171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKF  249 (303)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            99999987654 37888899999999888877766  332211111  11122333343333 36667788888899999


Q ss_pred             CceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865          268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIM  319 (334)
Q Consensus       268 ~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~  319 (334)
                      +|...+....+.-+.+++++.+++|+++++.++.|.++++.|..+....|++
T Consensus       250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999999999888766554

; GO: 0055085 transmembrane transport

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.64  E-value=2.5e-15  Score=115.48  Aligned_cols=135  Identities=14%  Similarity=0.172  Sum_probs=121.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (334)
                      ...++.+++++.||...++.|... ++.||...++.|..+..+++..+....++.+.....+.+.+..+.+.|+.+++.+
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence            456788999999999999999965 6899999999999999999999988777655433456777788889998889999


Q ss_pred             HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ++||.|++...++....+..++|+++.+++++++|||++.+      +|+|+.+..+|++++
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailv  137 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeE
Confidence            99999999999999999999999999999999999999999      999999999999886

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.60  E-value=2.5e-14  Score=110.00  Aligned_cols=136  Identities=18%  Similarity=0.149  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHH
Q 019865          177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR  256 (334)
Q Consensus       177 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~  256 (334)
                      -.++++++++.+++..+..|-..++.| |..-+..+..+..+....+....++.... ....+..|..++..|+ .++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGl-a~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGL-AGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHH-HHHHH
Confidence            368899999999999999999988887 98899999999888888877666653211 1123558888999995 99999


Q ss_pred             HHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          257 SVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       257 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      ..+|++|+++.+++++.++....|+++.+++++++||++|..+++|+++|.+|.++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999987764

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.59  E-value=5.9e-16  Score=132.46  Aligned_cols=276  Identities=12%  Similarity=0.080  Sum_probs=209.3

Q ss_pred             HHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 019865           17 VGLNTVTKAAMSRGA-SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSP   95 (334)
Q Consensus        17 g~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~   95 (334)
                      +......-.+ ..+. .|..-.|.-..+-++.-.+++.++++ .  -+.+   |++.+++|+...-++++...|.|||+.
T Consensus        32 ~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-~--~~~~---~~hYilla~~DVEaNy~vV~AyQyTsm  104 (336)
T KOG2766|consen   32 STAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPIMLFRRK-Y--IKAK---WRHYILLAFVDVEANYFVVKAYQYTSM  104 (336)
T ss_pred             cchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhHHHhhhH-H--HHHH---HHHhhheeEEeecccEEEeeehhhcch
Confidence            3334444442 3333 46677788888888888888876442 1  1223   346788888888888889999999999


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchh
Q 019865           96 ALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWT  175 (334)
Q Consensus        96 ~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (334)
                      ..+.++..-.-+.+.+++|+++|.|.++.      |+.|.++|+.|+.++++.             +.++++..++.+-.
T Consensus       105 tSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s-------------DV~agd~aggsnp~  165 (336)
T KOG2766|consen  105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS-------------DVHAGDRAGGSNPV  165 (336)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe-------------eeccccccCCCCCc
Confidence            99999999998999999999999999999      999999999999998542             22232333456668


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHH
Q 019865          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV  255 (334)
Q Consensus       176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~  255 (334)
                      +||++.+++|.+||+.++....+.|+.+ ..+.+....++|+++..+- .+.+.+. ..+..++..... .....++..+
T Consensus       166 ~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~-~~tl~w~~~i~~-yl~f~L~MFl  241 (336)
T KOG2766|consen  166 KGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHH-VSTLHWDSAIFL-YLRFALTMFL  241 (336)
T ss_pred             cCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccc-eeeEeehHHHHH-HHHHHHHHHH
Confidence            9999999999999999999999999997 8889999999999988887 4555432 112212212222 2224456666


Q ss_pred             HHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHHhhhhh
Q 019865          256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVC  324 (334)
Q Consensus       256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~~~~~~  324 (334)
                      =|.+.-..+|..+++..+........+++++  -.||-..+|...+....+..|+.+...|++..|+.+
T Consensus       242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~r  308 (336)
T KOG2766|consen  242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEELR  308 (336)
T ss_pred             HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhhc
Confidence            6777778899999999999999999999999  567888999999999999999988875554444433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.57  E-value=1.7e-14  Score=114.43  Aligned_cols=123  Identities=22%  Similarity=0.312  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhc
Q 019865           14 FLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIEN   92 (334)
Q Consensus        14 ~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~   92 (334)
                      ++||...+..|... ++.||....++|+..+.+ +.+.....+++.. ++.+.+++......|.++ ..++.++++++++
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~   77 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY   77 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence            47999999999954 569999999999999997 6666555554432 455667777888899997 9999999999999


Q ss_pred             cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           93 GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        93 ~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ++++.++.+.++.|+++.+++++++||+++++      +++|+++.+.|++++
T Consensus        78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI  124 (126)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      999999999999987

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.48  E-value=8.3e-14  Score=110.37  Aligned_cols=125  Identities=18%  Similarity=0.270  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhc
Q 019865          186 VILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALR  265 (334)
Q Consensus       186 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~  265 (334)
                      ++|+.+.+..|+..++.+ +...+.+++..+++ ..+.....+..+  ....+...+....+.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            468899999999999987 99999999999998 666665555432  11122346777888888889999999999999


Q ss_pred             cCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          266 KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       266 ~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      +.++++++.+.+++|+++.++++++++|++++.+++|+++++.|+++++
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.46  E-value=7.3e-12  Score=111.02  Aligned_cols=230  Identities=11%  Similarity=0.129  Sum_probs=164.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865           65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (334)
Q Consensus        65 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l  144 (334)
                      ++++..+..+-+++.++.+.+.|.++++.+++.-.++.++-.+++++++.+++|+|++++      ||+++.+.++|+.+
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence            456678899999999999999999999999999999999999999999999999999999      99999999999998


Q ss_pred             HHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHH
Q 019865          145 VTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAV  223 (334)
Q Consensus       145 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~  223 (334)
                      +.......    .+....+....+.++.+...|.++.+.++++-++..++..|..|+.+. ....+....+.|.++..+.
T Consensus        87 v~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~  162 (244)
T PF04142_consen   87 VQLSSSQS----SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLA  162 (244)
T ss_pred             eecCCccc----cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Confidence            73211110    000000001011123456889999999999999999999999888642 4555566667777766666


Q ss_pred             HHhccCCC-CcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhh
Q 019865          224 SLVAEKNP-NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC  302 (334)
Q Consensus       224 ~l~~~~~~-~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG  302 (334)
                      ....+... .+...-  ..+-...+..++...++=.+....+|+.+...=+....+..+.+.+.+++++|.+++...++|
T Consensus       163 ~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  163 LLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             HhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            54443321 111100  111112222333344444455566788888777888888999999999999999999999999


Q ss_pred             hHHH
Q 019865          303 MILR  306 (334)
Q Consensus       303 ~~lI  306 (334)
                      +.++
T Consensus       241 ~~~V  244 (244)
T PF04142_consen  241 AALV  244 (244)
T ss_pred             eecC
Confidence            8754

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.45  E-value=7.1e-13  Score=120.33  Aligned_cols=272  Identities=11%  Similarity=0.086  Sum_probs=204.1

Q ss_pred             HHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhh
Q 019865           22 VTKAAMS--RGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALAS   99 (334)
Q Consensus        22 ~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~   99 (334)
                      ..|..+.  +---|..++..+...+.+.+.....++..+.. +..++..+...+-+|++.+++..+-..++.+.|++...
T Consensus        35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q  113 (316)
T KOG1441|consen   35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQ  113 (316)
T ss_pred             eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHH
Confidence            3455444  22347788888888887776666555443332 22233455677788888899999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHH
Q 019865          100 AMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGI  179 (334)
Q Consensus       100 ~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  179 (334)
                      .+=.+.|+++.++++++.+|+.+.+      .++.++....|+.+-+.                     ++.+-+..|.+
T Consensus       114 ~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~---------------------~e~~fn~~G~i  166 (316)
T KOG1441|consen  114 TIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV---------------------TELSFNLFGFI  166 (316)
T ss_pred             HHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee---------------------ccccccHHHHH
Confidence            9999999999999999999999999      89888888888887631                     12334578999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh--hCC-chHHHHHHHHHHHHHHHH-HHHHhccCCCCc-ccc-cCCchhhHHHHHHHHHH
Q 019865          180 FLAAHSVILAIYYIVQAWIVR--DYP-AELMVTLICSIFVTILSS-AVSLVAEKNPNA-WRL-RPDIELMAIGYSAIFAV  253 (334)
Q Consensus       180 ~~l~aa~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~l~~~i~~~-~~~l~~~~~~~~-~~~-~~~~~~~~ll~~gi~~t  253 (334)
                      .++++.+..+..+++.++..+  +.+ +++....++.-.+.+.++ |.....|++... +.. .++......++.. +..
T Consensus       167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~  245 (316)
T KOG1441|consen  167 SAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLA  245 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHH
Confidence            999999999999999999984  221 388888888888888888 877665553220 010 1122233333333 222


Q ss_pred             HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHHhhh
Q 019865          254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNF  322 (334)
Q Consensus       254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~~~~  322 (334)
                      ..-....++.+++.+|.+.++.+.+--++.++.++++++|+.++.+..|+++-+.|+++.++-|.+.++
T Consensus       246 f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  246 FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            233345567889999999999999999999999999999999999999999999999999987776443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.43  E-value=1.5e-10  Score=104.76  Aligned_cols=297  Identities=12%  Similarity=0.085  Sum_probs=206.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-CCCC------cHHHHHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRG---ASHFILVVYSNTLAIFLLVPSSFIFYRK--RT-PPQL------TWSIVCRIF   73 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~--~~-~~~~------~~~~~~~~~   73 (334)
                      +..+++..+-++......|.+...+   +.|...++.--.+-.++.....+...|+  ++ .+++      .+++..+..
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            5567777888999999999865555   6677888777777776666665554322  11 0111      244567888


Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCC
Q 019865           74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI  153 (334)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~  153 (334)
                      +-+++.++.+-++|.++.+.+++.-.+..++--+.|+++..+++++|++++      ||.++++..+|+.++-....+..
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCCCCC
Confidence            889999888889999999999999999999999999999999999999999      99999999999999831111100


Q ss_pred             CCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 019865          154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPN  232 (334)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~  232 (334)
                                ++.......+...|....+.++..-++..++..+..|+-+. .+..+.-..++|.++.+...+..+....
T Consensus       171 ----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i  240 (345)
T KOG2234|consen  171 ----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI  240 (345)
T ss_pred             ----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence                      01112234566889999999999999999999999887543 3444555556666655555544433211


Q ss_pred             cccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865          233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR  312 (334)
Q Consensus       233 ~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l  312 (334)
                      .|. .--..+-...+..++..+++=.+-..-+|+.+-..=+....+..+++.+.++.++|-+||...++|..+++.++.+
T Consensus       241 ~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l  319 (345)
T KOG2234|consen  241 NEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL  319 (345)
T ss_pred             ccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence            111 0011222222333333333333333444555555445556678899999999999999999999999999999999


Q ss_pred             hhhhhHH
Q 019865          313 INKVEIM  319 (334)
Q Consensus       313 ~~~~~~~  319 (334)
                      .+..+..
T Consensus       320 Y~~~P~~  326 (345)
T KOG2234|consen  320 YSLYPAR  326 (345)
T ss_pred             hhcCCcc
Confidence            9854443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.31  E-value=5.3e-11  Score=106.80  Aligned_cols=130  Identities=17%  Similarity=0.171  Sum_probs=110.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-   79 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-   79 (334)
                      .+++...+.++++|+......|.. .++.+|  .....+|+.++.+.+.++....+++   +..+.+++......+.++ 
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  202 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRL-VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN---PQALSLQWGALLYLGLIGT  202 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHH-hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHH
Confidence            457888999999999999999994 445664  4555688999999888887654332   223556666778888888 


Q ss_pred             HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHH
Q 019865           80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGA  142 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv  142 (334)
                      ..++.++++++++.+++.++.+.++.|+++.++++++++|+++.+      ++.|+.+.+.|+
T Consensus       203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~  259 (260)
T TIGR00950       203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence            899999999999999999999999999999999999999999999      999999999886

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.25  E-value=3.1e-11  Score=94.44  Aligned_cols=102  Identities=23%  Similarity=0.398  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCC-CCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHH
Q 019865           38 VYSNTLAIFLLVPSSFIFYRKRT-PPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAII  115 (334)
Q Consensus        38 ~~R~~~a~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~  115 (334)
                      .+|++.+.+++..+...+++.+. .+..+.+.+.+....|.++ ..++.++++|+++.+ +.++.+.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            58999999998888777543211 0122334445667778888 699999999999999 58889999999999999999


Q ss_pred             HhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865          116 FRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus       116 ~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      ++|||++++      ++.+++++++|++++.
T Consensus        81 ~~~er~~~~------~~~a~~l~~~Gv~li~  105 (113)
T PF13536_consen   81 FFKERLSPR------RWLAILLILIGVILIA  105 (113)
T ss_pred             HhcCCCCHH------HHHHHHHHHHHHHHHh
Confidence            999999999      9999999999999994

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.25  E-value=2.2e-09  Score=95.26  Aligned_cols=226  Identities=16%  Similarity=0.128  Sum_probs=154.7

Q ss_pred             CCCcH--HHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHH
Q 019865           62 PQLTW--SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLL  138 (334)
Q Consensus        62 ~~~~~--~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~  138 (334)
                      |..+.  +.+...++.|++...++...|.++++.+.+.+..+.. .+-+.+.+++.++++|.-+.+.+.  .-.+++++.
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~--~G~~Al~li  113 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKI--IGFLALVLI  113 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHH--HHHHHHHHH
Confidence            44543  7778888999999999999999999999999999975 667788899999999998877111  123477777


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 019865          139 IGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI  218 (334)
Q Consensus       139 l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i  218 (334)
                      ++|+.+.+..+.+             .+..++.++...|....+++.+.|..|.+..|..  +.+ +.....=+.+--.+
T Consensus       114 iiGv~lts~~~~~-------------~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i  177 (269)
T PF06800_consen  114 IIGVILTSYQDKK-------------SDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLI  177 (269)
T ss_pred             HHHHHHhcccccc-------------ccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHH
Confidence            8888776332111             1111124556789999999999999999997763  343 55554433333222


Q ss_pred             HHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccch
Q 019865          219 LSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLG  298 (334)
Q Consensus       219 ~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~  298 (334)
                      ...++....+....+     +..+..+ ..|+ .=.++=.++..+.++.|.+..-.+.-+.++++.+.+.+++||+-+..
T Consensus       178 ~a~i~~~~~~~~~~~-----k~~~~ni-l~G~-~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  178 GAFIFNLFSKKPFFE-----KKSWKNI-LTGL-IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHhhcccccccc-----cchHHhh-HHHH-HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            223333222221111     1122222 2232 22346677888999999999999999999999999999999998865


Q ss_pred             ----hhhhhHHHHhhHHh
Q 019865          299 ----RCVCMILRGLQFLR  312 (334)
Q Consensus       299 ----~~iG~~lIi~g~~l  312 (334)
                          .++|.++++.|.++
T Consensus       251 e~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  251 EMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHHHHHHHHHHHHhhhc
Confidence                45677777777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.20  E-value=1e-09  Score=93.44  Aligned_cols=220  Identities=12%  Similarity=0.100  Sum_probs=173.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCC
Q 019865           72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL  151 (334)
Q Consensus        72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~  151 (334)
                      ...+..-..+++..-..|+|+.|=-...+--+.-|+=+++++..+.+++.+++      +..-.++.++|+.+. .++.+
T Consensus        88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValF-mYK~~  160 (337)
T KOG1580|consen   88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALF-MYKEN  160 (337)
T ss_pred             HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHh-hcccc
Confidence            33444444777788889999998777777777889999999999999999999      999999999999987 55432


Q ss_pred             CCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865          152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN  230 (334)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~  230 (334)
                      --.             ..++++...|.++.+++-.--++....+.|..+.+. ....++....+++.+.+..-.++++..
T Consensus       161 Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGEl  227 (337)
T KOG1580|consen  161 KVG-------------GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGEL  227 (337)
T ss_pred             ccC-------------CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhH
Confidence            211             123456688999999887777777778888776654 256778888899998777766666543


Q ss_pred             C--CcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHh
Q 019865          231 P--NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGL  308 (334)
Q Consensus       231 ~--~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~  308 (334)
                      +  ..+....+..|.-+...++ ++++++++.+.-+...||-.-|+++...-.++++.+.++++.+++..|++|.+++++
T Consensus       228 weF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~  306 (337)
T KOG1580|consen  228 WEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFS  306 (337)
T ss_pred             HHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHH
Confidence            2  1222233445666667776 888999999999999999999999999999999999999999999999999999998


Q ss_pred             hHHh
Q 019865          309 QFLR  312 (334)
Q Consensus       309 g~~l  312 (334)
                      ++..
T Consensus       307 aL~~  310 (337)
T KOG1580|consen  307 ALTA  310 (337)
T ss_pred             Hhhh
Confidence            8764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.10  E-value=3.1e-09  Score=97.22  Aligned_cols=134  Identities=13%  Similarity=0.007  Sum_probs=111.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (334)
                      .+.++.+.++++|+......|. .. ..++.....+++..+++.+.++....+.... ...+.+.+......+.++ ..+
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSR-LP-LPVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-cC-CCcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHHH
Confidence            4778889999999999999998 33 3345667788999998888777654332211 112445667778888888 899


Q ss_pred             HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      +.+|++++++.+++.++.+.++.|++++++++++++|+++..      +++|+++.+.|+++..
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999      9999999999999874

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.10  E-value=7.3e-10  Score=101.55  Aligned_cols=140  Identities=14%  Similarity=0.080  Sum_probs=110.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cccCCchhhHHHHHHHH
Q 019865          173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAW-RLRPDIELMAIGYSAIF  251 (334)
Q Consensus       173 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~-~~~~~~~~~~ll~~gi~  251 (334)
                      +..+|.++.+.++++|+...+..|.. .+.+ |.+.++++++++.+++.+......+.+... ...+...+ .....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHH
Confidence            44689999999999999999999765 5676 999999999999987776654332211100 00011122 22335566


Q ss_pred             HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      ..+..+.++++++++.+++.++.+.+..|++..++++++++|+++..+++|.++.+.|+.+...
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            7778899999999999999999999999999999999999999999999999999999988763

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.07  E-value=5.1e-09  Score=95.82  Aligned_cols=133  Identities=15%  Similarity=0.135  Sum_probs=108.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (334)
                      .+.+..+.++++|+...+..|.. .++.+|....... .++++.+.++...... .  ...++..+......|++. .++
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRA-GAEHGPATVAIGS-LIAALIFVPIGALQAG-E--ALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHHHH-HHHHHHHHHHHHHccC-c--ccCCHHHHHHHHHHHHHHHHHH
Confidence            36778899999999999999984 5568888775554 5566666666554322 1  223444444556788888 899


Q ss_pred             HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (334)
Q Consensus        83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~  147 (334)
                      +.++++++++.+++.++.+.++.|+++.++++++++|+++..      +++|..+.+.|++....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999      99999999999998854

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.07  E-value=1.5e-08  Score=89.72  Aligned_cols=264  Identities=11%  Similarity=0.075  Sum_probs=187.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHH
Q 019865           32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI  111 (334)
Q Consensus        32 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~l  111 (334)
                      +|..+++..-+.+.+.-......  ++.. . .....+++....++.......|-|.|++|.+==.-.+-=++--+=+++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~-~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-L-SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhc--cccc-C-CCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            47778888878877665444332  2222 1 112223456666776788889999999998754433333333444567


Q ss_pred             HHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHH
Q 019865          112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY  191 (334)
Q Consensus       112 la~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~  191 (334)
                      ++.++.|.|.+.+      +.+-.++.-.|+.+..+.+.+..            .....+++...|..++...-+.=++-
T Consensus       126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDgfT  187 (327)
T KOG1581|consen  126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDGFT  187 (327)
T ss_pred             HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHhhH
Confidence            8899999999999      99999999899988755432211            01224456689999999998888889


Q ss_pred             HHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCc--ccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865          192 YIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNA--WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG  268 (334)
Q Consensus       192 ~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~--~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~  268 (334)
                      +..++++-+++. ++..+++...+++++.-....+-.+...+.  +....+..+.-++.... +..++|.+-++-+++-|
T Consensus       188 n~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  188 NATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence            999999887643 378888888888888766664332222221  21122223444444444 56689999999999999


Q ss_pred             ceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       269 a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      +-..+.++...=++++.++.+.+|.++++.|+.|..+++.|+.+-...++
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999886554333

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.03  E-value=2.4e-07  Score=83.06  Aligned_cols=288  Identities=9%  Similarity=0.025  Sum_probs=204.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFI--LVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~--~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (334)
                      ....+.=++.--.+.+.-|.++...=-|..  +...+++.+.+.+...-.. +--+. ++++++..++.+-..++..+..
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~-~~l~~~~~kk~~P~~~lf~~~i   91 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNF-RPLDLRTAKKWFPVSLLFVGML   91 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeec-CCcChHHHHHHccHHHHHHHHH
Confidence            444444444455566677775543222333  3458888887766555322 21222 5677887788888888877777


Q ss_pred             HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 019865           84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI  163 (334)
Q Consensus        84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~  163 (334)
                      ..-..+++|.+...-.++=+..|+++++....++|.|++.+      .+.++....+|.......               
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~---------------  150 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT---------------  150 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---------------
Confidence            78889999999999999999999999999999999888888      999999888887766221               


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCC---Cccc-ccC
Q 019865          164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNP---NAWR-LRP  238 (334)
Q Consensus       164 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~-~~~  238 (334)
                            +......|..+++...++-+.+.+..|+..+..+ .....+++..+.+.........++++.+   .+.+ ...
T Consensus       151 ------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~  224 (314)
T KOG1444|consen  151 ------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD  224 (314)
T ss_pred             ------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc
Confidence                  1112244899999999999999999998755322 2566778888888887777776666421   1111 111


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       239 ~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      ...+..+...++++-++.|.. .+..+..++++.++....+-....+-..++.|++.++..++|..+=+.|-++.+..+.
T Consensus       225 ~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~  303 (314)
T KOG1444|consen  225 SSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF  303 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence            234667777788777776654 4667778888899999777788888888888999999999998887766666665544


Q ss_pred             Hhhhh
Q 019865          319 MMNFV  323 (334)
Q Consensus       319 ~~~~~  323 (334)
                      +.++.
T Consensus       304 ~~k~~  308 (314)
T KOG1444|consen  304 RKKKQ  308 (314)
T ss_pred             hhccC
Confidence            44433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.03  E-value=2.5e-09  Score=97.34  Aligned_cols=134  Identities=12%  Similarity=0.065  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHH
Q 019865          178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS  257 (334)
Q Consensus       178 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~  257 (334)
                      .++.+.++++||.+.+..|+..++.+ +.  ..+....++++..|....... ...|...+ ..+...+..+.......+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence            46788999999999999998877644 42  455556666677776654211 12233222 233334444445777889


Q ss_pred             HHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          258 VFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       258 ~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      .++.+++++.+++.++++.+.+|+++.+++++++||++++.+++|..+++.|+++...+
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887644

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.02  E-value=9.2e-09  Score=94.23  Aligned_cols=130  Identities=18%  Similarity=0.202  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (334)
                      +.++++.++++|+...+..|. ..++.+|.....   ..+.+.+.+.....+.. . ...+.+.+......+....+++.
T Consensus       157 G~~~~l~aa~~~A~~~v~~k~-~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~t~~~~~  230 (295)
T PRK11689        157 SYGLAFIGAFIWAAYCNVTRK-YARGKNGITLFF---ILTALALWIKYFLSPQP-A-MVFSLPAIIKLLLAAAAMGFGYA  230 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-ccCCCCchhHHH---HHHHHHHHHHHHHhcCc-c-ccCCHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999 455678776532   33333444433332211 1 23455556666666643388999


Q ss_pred             HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      ++++++++.+++.++.+.++.|++..++++++++|+++..      +++|+++.+.|+.+..
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence            9999999999999999999999999999999999999999      9999999999998873

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.99  E-value=2.1e-08  Score=93.99  Aligned_cols=135  Identities=10%  Similarity=0.097  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHHHHHHHhhccCC---CCCCcHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHF-ILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSC   80 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~-~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~   80 (334)
                      +.+.++.++++|+...+..|... ++++|. ...++...++.+.+.+......+...   ....+.. .......+....
T Consensus       190 G~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~  267 (358)
T PLN00411        190 GGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITS  267 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHH
Confidence            45678889999999999999844 456554 66777777777766555554332111   0111222 122333443336


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~  147 (334)
                      +++.++++++++.+++.+++..++.|++++++++++++|+++..      +++|.++.+.|+.+...
T Consensus       268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence            78889999999999999999999999999999999999999999      99999999999999854

>TIGR00688 rarD rarD protein

Probab=98.95  E-value=5.5e-09  Score=93.69  Aligned_cols=137  Identities=12%  Similarity=0.133  Sum_probs=108.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCC---CcccccCCch-hhHHHHHHHH
Q 019865          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP---NAWRLRPDIE-LMAIGYSAIF  251 (334)
Q Consensus       176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~~~~~~~-~~~ll~~gi~  251 (334)
                      +|.++.++++++|+...+..|. ..+.+ |.+.++++++++++++.+......+..   ..++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999997 45676 999999999999887766554332210   0111111112 3345555654


Q ss_pred             HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                       .+..+.++++++++.+++.++.+.+..|+++.+++++++||+++..+++|.++.+.|+.+...
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence             667899999999999999999999999999999999999999999999999999999887653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.94  E-value=5.6e-09  Score=83.16  Aligned_cols=122  Identities=12%  Similarity=0.096  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHH
Q 019865          176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV  255 (334)
Q Consensus       176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~  255 (334)
                      .|.++.+.+.++-+..+++.|+-.++.+ +.+.... .    . ..... ..             .-...++.|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~-~~-------------~p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLA-FG-------------LALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHH-Hh-------------ccHHHHHHHHHHHHH
Confidence            4678888888888999999999887765 3221111 0    0 00011 00             111245788889999


Q ss_pred             HHHHHHHHhccCCceEEEeccchHHHHHHHHHHH--HhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA--FLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l--~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      ++.+|.+++++.+.+.+.++..+.++...+.++.  ++||++|+.+++|..+|+.|+++++++++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999998888888885  89999999999999999999999886554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.91  E-value=8.3e-07  Score=81.94  Aligned_cols=295  Identities=11%  Similarity=0.031  Sum_probs=173.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH--HHhhccCC--CCCCcHHHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSS--FIFYRKRT--PPQLTWSIVCRIFLLGLLS   79 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~--~~~~~~~~--~~~~~~~~~~~~~~~g~~~   79 (334)
                      .+++..+++.++||..+.-.|. . ++.+=..+-..-..++.+ +.|..  .+.-+...  ....+.+.+...++.|++.
T Consensus         7 ~G~~~~~i~~~~~GS~~~p~K~-~-k~w~wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W   83 (345)
T PRK13499          7 LGIIWHLIGGASSGSFYAPFKK-V-KKWSWETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALW   83 (345)
T ss_pred             HHHHHHHHHHHHhhcccccccc-c-CCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHH
Confidence            4788999999999999999998 3 334422220001111111 11100  00001000  0224566677788888888


Q ss_pred             HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccc---eeeeccccchhhHHHHHHHHHHHHHHhcCCCCCC
Q 019865           80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL---ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS  155 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~---~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~  155 (334)
                      ..++..++.++++.+.+.+..+. .++-+...++..++++|-.   +..+  ...-.+|+++.++|+.+......-    
T Consensus        84 ~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~----  157 (345)
T PRK13499         84 GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL----  157 (345)
T ss_pred             HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh----
Confidence            99999999999999999999884 4888999999999988765   3331  112678889999999988542211    


Q ss_pred             CCCCccccccccc-CCCcchhhHHHHHHHHHHHHHHHH-------HHHHHHH-hhCCchHHHHHH---HHHHHHHHHHH-
Q 019865          156 APSKNKLINELVQ-LPLSNWTIGGIFLAAHSVILAIYY-------IVQAWIV-RDYPAELMVTLI---CSIFVTILSSA-  222 (334)
Q Consensus       156 ~~~~~~~~~~~~~-~~~~~~~~G~~~~l~aa~~~a~~~-------v~~~~~~-~~~~~~~~~~~~---~~l~~~i~~~~-  222 (334)
                           ++++..++ .++.+..+|.+.++++.+.++.|+       ...+... .+.+ +.....-   .++.+..+.-. 
T Consensus       158 -----k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~~~n~~  231 (345)
T PRK13499        158 -----KERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGAITNLG  231 (345)
T ss_pred             -----cccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHHHHHHH
Confidence                 11111110 234567899999999999999999       3333211 1222 3222222   22234433322 


Q ss_pred             HHHh---ccCCC---CcccccC---CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEe---cc-chHHHHHHHHHHH
Q 019865          223 VSLV---AEKNP---NAWRLRP---DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSM---FK-PLGMVVALVFGIA  289 (334)
Q Consensus       223 ~~l~---~~~~~---~~~~~~~---~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~---~~-~l~Pv~a~~~~~l  289 (334)
                      .-..   .+++.   .+.....   .......+..|+ .=.++..+|..+-++.+......   +. -+..+++.+++. 
T Consensus       232 ~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-  309 (345)
T PRK13499        232 FCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-  309 (345)
T ss_pred             HHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-
Confidence            1111   21211   1111100   011111123333 33456777778877776654433   33 666799999999 


Q ss_pred             HhCCccc------chhhhhhHHHHhhHHhhhh
Q 019865          290 FLGDTLY------LGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       290 ~l~E~l~------~~~~iG~~lIi~g~~l~~~  315 (334)
                      ++||.=+      ...++|.++++.|..+...
T Consensus       310 ~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        310 VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            4999877      5668899998888877653

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.87  E-value=6.4e-08  Score=84.69  Aligned_cols=279  Identities=15%  Similarity=0.148  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHHHh---CCCC----hHHHHHHHHHHHHHHHHHHHHHhhccCCC----------CCC--cHHHHHHHHHHH
Q 019865           16 DVGLNTVTKAAMS---RGAS----HFILVVYSNTLAIFLLVPSSFIFYRKRTP----------PQL--TWSIVCRIFLLG   76 (334)
Q Consensus        16 wg~~~~~~k~~~~---~~~~----p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~g   76 (334)
                      -+.+.+..|.+-+   ++-|    |+.....-++-=.++++.+.+.+.+..++          ++.  +.+ ....+.-+
T Consensus        15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pa   93 (372)
T KOG3912|consen   15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPA   93 (372)
T ss_pred             ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChH
Confidence            3456777776422   2222    55555555555556667766665443221          000  111 12233466


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCC
Q 019865           77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA  156 (334)
Q Consensus        77 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~  156 (334)
                      ++...+..+.|.|+.+|+++.-..+-...-+|+.+++..+++++++.+      ||+|+.....|++.+... .....  
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-d~~~~--  164 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-DVHLV--  164 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-ecccc--
Confidence            677888899999999999999999999999999999999999999999      999999999999988221 00000  


Q ss_pred             CCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 019865          157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEK----NP  231 (334)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~----~~  231 (334)
                              .+...+.++...|+++.+.+-+.-|...+.-.|..++.+ +|...+.|..++|.++...++.....    ++
T Consensus       165 --------~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s  236 (372)
T KOG3912|consen  165 --------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS  236 (372)
T ss_pred             --------cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence                    011112345688999999999999999999888877644 58999999999996655544433221    11


Q ss_pred             C---------ccc----ccCCchhhHHHHHHHHHHHHHHHHHH---H-HhccCCceEEEeccchHHHHHHHHHHHHhCCc
Q 019865          232 N---------AWR----LRPDIELMAIGYSAIFAVSVRSVFHT---W-ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDT  294 (334)
Q Consensus       232 ~---------~~~----~~~~~~~~~ll~~gi~~t~~~~~l~~---~-al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~  294 (334)
                      .         +|.    -......+.+...|.   .++-.+++   . --|..++++=.....+...+-=+++.....|.
T Consensus       237 fS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~  313 (372)
T KOG3912|consen  237 FSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY  313 (372)
T ss_pred             CcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH
Confidence            0         110    000111222333333   33333332   1 22345555556666677777777777888899


Q ss_pred             ccchhhhhhHHHHhhHHhhhh
Q 019865          295 LYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       295 l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      .+..|+.|..+.+.|+.+.+.
T Consensus       314 f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  314 FHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988763

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.85  E-value=2.6e-08  Score=81.90  Aligned_cols=137  Identities=12%  Similarity=0.136  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHHHhccCCCC---ccccc------CCch
Q 019865          177 GGIFLAAHSVILAIYYIVQAWIVRD------YPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRLR------PDIE  241 (334)
Q Consensus       177 G~~~~l~aa~~~a~~~v~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~---~~~~~------~~~~  241 (334)
                      |.++++.+.++.+++.++.|+..++      ..++.....+....+.+...|.....|.+..   .....      .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6788999999999999999998665      2258899999999999999999888877431   11110      1123


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       242 ~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      +..++..|++ ...-....++.+++.+|...++...+..+..++.+++++||++++.++.|.++.+.|.++.+
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            4445555553 34557777889999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.82  E-value=2e-07  Score=82.63  Aligned_cols=254  Identities=15%  Similarity=0.161  Sum_probs=168.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCC--CCCCcHHHH-HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHH
Q 019865           33 HFILVVYSNTLAIFLLVPSSFIFYRKRT--PPQLTWSIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFT  109 (334)
Q Consensus        33 p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~  109 (334)
                      |..++...+++=.++-.......+++..  +...+|++. ++....|+..+..-.+-.++++|++.+.=+..=+++++|+
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            6677766665554433333222221111  134556554 4556677777888889999999999999999999999999


Q ss_pred             HHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHH
Q 019865          110 FILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILA  189 (334)
Q Consensus       110 ~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a  189 (334)
                      .+++.++.-||.++.      -..-..+..+|+.+.+. +                    +++-...|..+...++.+-+
T Consensus       125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~-K--------------------sTqf~i~Gf~lv~~aS~~sG  177 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-K--------------------STQFNIEGFFLVLAASLLSG  177 (349)
T ss_pred             HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-c--------------------ccceeehhHHHHHHHHHhhh
Confidence            999999999999988      66666666677766532 1                    12334667777766666544


Q ss_pred             HHHHHHHHHHhhC----CchHHHHHHHHHHHHHHHHHHHHhccCCCC-----cccccCCc-hhhHHHHHHHHHHHHHHHH
Q 019865          190 IYYIVQAWIVRDY----PAELMVTLICSIFVTILSSAVSLVAEKNPN-----AWRLRPDI-ELMAIGYSAIFAVSVRSVF  259 (334)
Q Consensus       190 ~~~v~~~~~~~~~----~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~-----~~~~~~~~-~~~~ll~~gi~~t~~~~~l  259 (334)
                      +--...+++.++-    ++|........-...+.+.|..+..|+...     .+...... .+..+.+.+. +..+++.+
T Consensus       178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l  256 (349)
T KOG1443|consen  178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL  256 (349)
T ss_pred             hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence            4444444433332    247777777677777778888888887421     22222111 2222222222 33333333


Q ss_pred             HH---HHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          260 HT---WALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       260 ~~---~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      -.   -.+.+.+..+.++..-.--+-..++|....+|+++-..+.|..+...|+.+-.
T Consensus       257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            22   34567888888999999999999999999999999999999999999998873

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.80  E-value=1.8e-07  Score=85.85  Aligned_cols=135  Identities=17%  Similarity=0.140  Sum_probs=102.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHHHHHHHHHHhhccCC----CCCCcHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASH---FILVVYSNTLAIFLLVPSSFIFYRKRT----PPQLTWSIVCRIFLLG   76 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p---~~~~~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g   76 (334)
                      .+.++.+.++++|+...+..|.. .++.++   .....+-..++.+.+.......+....    ....+.+.+......|
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKI-MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            46778899999999999999983 333332   334444455544433333222221110    0134556677788889


Q ss_pred             HHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           77 LLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        77 ~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      .+. ..++.++++++++.+++.++.+..+.|++..++++++++|+++..      +++|..+.++|+.+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~  285 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHH
Confidence            888 899999999999999999999999999999999999999999999      999999999999876

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.79  E-value=2.3e-08  Score=83.11  Aligned_cols=214  Identities=15%  Similarity=0.133  Sum_probs=151.2

Q ss_pred             HHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865           79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS  158 (334)
Q Consensus        79 ~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~  158 (334)
                      ....++.|..+++..+++.++.+.....-|+.+++++.+|||...-      ++++.++++.|++++.-. +        
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~-D--------  127 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYA-D--------  127 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEec-c--------
Confidence            3678899999999999999999999999999999999999999999      999999999999988321 1        


Q ss_pred             CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--chHHHHHHHHHHHHHHHHHHHH---hccC-CCC
Q 019865          159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP--AELMVTLICSIFVTILSSAVSL---VAEK-NPN  232 (334)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~l~~~i~~~~~~l---~~~~-~~~  232 (334)
                                .+..+...|..++..++.--++|-++.|+.....+  |.-..+.--.++-.++...-++   +++- +.+
T Consensus       128 ----------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q  197 (290)
T KOG4314|consen  128 ----------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ  197 (290)
T ss_pred             ----------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH
Confidence                      13455688999999999999999999999876543  2222221111222222221111   1211 122


Q ss_pred             cccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865          233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR  312 (334)
Q Consensus       233 ~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l  312 (334)
                      ++..   ..|..+...+.+.... -.+-+.++....|-..|.-.....+....++.++=+-..+...+.|..+|+.|..+
T Consensus       198 sFA~---~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL  273 (290)
T KOG4314|consen  198 SFAA---APWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL  273 (290)
T ss_pred             HHhh---CCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            2221   2455555444433333 23344666777888888888888888899998876767788899999999999887


Q ss_pred             hhhhhHHhh
Q 019865          313 INKVEIMMN  321 (334)
Q Consensus       313 ~~~~~~~~~  321 (334)
                      ....++.+|
T Consensus       274 iiiP~d~~e  282 (290)
T KOG4314|consen  274 IIIPEDKDE  282 (290)
T ss_pred             eecccchhh
Confidence            775554443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.72  E-value=9e-08  Score=87.95  Aligned_cols=136  Identities=18%  Similarity=0.206  Sum_probs=104.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-C-------CcHHHHHH-H
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSR--GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-Q-------LTWSIVCR-I   72 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~--~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-~-------~~~~~~~~-~   72 (334)
                      .+.+..+.++++|+...+..|.. .+  ++||..+..+-+..+.+.+.|+....+.....+ +       ........ .
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKA-MTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh-hccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            47778899999999999999984 44  689999999999999999999876543211000 0       01011111 2


Q ss_pred             HHHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           73 FLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        73 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      ...+... ...+.+++.+++++++..+++.....|+++.++++++++|+++.+      +++|..+.+.|+.+..
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHH
Confidence            2223222 344467778999999999999999999999999999999999999      9999999999999874

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.72  E-value=2.5e-08  Score=77.97  Aligned_cols=108  Identities=12%  Similarity=0.181  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHH
Q 019865          211 ICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF  290 (334)
Q Consensus       211 ~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~  290 (334)
                      +...++.+..........+..+.+.......+...+..|+++...++.+|.+++++.++ .++.+..++|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44556666555555443332111221122355566666777777899999999999995 88899999999999999999


Q ss_pred             hCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865          291 LGDTLYLGRCVCMILRGLQFLRINKVEIM  319 (334)
Q Consensus       291 l~E~l~~~~~iG~~lIi~g~~l~~~~~~~  319 (334)
                      ++|++++.++.|.+++..|+.++...+..
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999988766543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.69  E-value=7e-07  Score=73.36  Aligned_cols=134  Identities=19%  Similarity=0.288  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--------CC--cHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--------QL--TWSI   68 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--------~~--~~~~   68 (334)
                      |+...+.+.++-+...+..|..+++      +.+|.++..+-...+.+++.|.....++....+        +.  ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4677889999999999999986665      689999999999999999999987765433100        00  2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865           69 VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (334)
Q Consensus        69 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l  144 (334)
                      +......|+++...+...+..++++++-..++....-.+.+.++++++++|+++.+      ++.|+.+++.|..+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence            45566667777899999999999999999999999999999999999999999999      99999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.65  E-value=2.3e-07  Score=84.83  Aligned_cols=229  Identities=16%  Similarity=0.238  Sum_probs=127.9

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC
Q 019865           74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP  152 (334)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~  152 (334)
                      +.|... ..+..+-+.|+.+.|.+..+.+..+.-++..+++..++|||++++      .+.|+.+++.|..++.... +.
T Consensus        54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~-~~  126 (300)
T PF05653_consen   54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA-PK  126 (300)
T ss_pred             HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC-CC
Confidence            445555 777788899999999999999999999999999999999999999      9999999999999875432 21


Q ss_pred             CCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH-------HHHHHHH
Q 019865          153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI-------LSSAVSL  225 (334)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i-------~~~~~~l  225 (334)
                      .+.  .+ +.++-........+. -.. .+...+...+.....+|..++ + .........+.|+.       +...+..
T Consensus       127 ~~~--~~-t~~~l~~~~~~~~fl-~y~-~~~~~~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~  199 (300)
T PF05653_consen  127 EEP--IH-TLDELIALLSQPGFL-VYF-ILVLVLILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISILIKL  199 (300)
T ss_pred             CCC--cC-CHHHHHHHhcCccee-hhH-HHHHHHHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHHHHHH
Confidence            111  00 000000000111111 111 111111222222222221111 1 11011111111111       1111111


Q ss_pred             hccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHH-HHHHHHHHhCCc--ccc----h
Q 019865          226 VAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVV-ALVFGIAFLGDT--LYL----G  298 (334)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~-a~~~~~l~l~E~--l~~----~  298 (334)
                      ..+++ +.+.  .+..|..++. -+.+...-....++|+++.+++.+.+..+..-.. +++-+.++++|.  .++    .
T Consensus       200 ~~~g~-~~f~--~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~  275 (300)
T PF05653_consen  200 TFSGD-NQFT--YPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG  275 (300)
T ss_pred             HhcCc-hhhh--hhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence            11111 1121  1223333322 2334455566677999999999998888776554 455566677874  444    4


Q ss_pred             hhhhhHHHHhhHHhhhhhhHHh
Q 019865          299 RCVCMILRGLQFLRINKVEIMM  320 (334)
Q Consensus       299 ~~iG~~lIi~g~~l~~~~~~~~  320 (334)
                      ...|+.+++.|+++.+++|+.+
T Consensus       276 ~~~G~~~ii~GV~lL~~~~~~~  297 (300)
T PF05653_consen  276 FLCGFLIIIIGVFLLSSSKDKE  297 (300)
T ss_pred             HHHHHHHHHHhhheeeccCchh
Confidence            4567788889999998777653

>TIGR00803 nst UDP-galactose transporter

Probab=98.54  E-value=4.5e-07  Score=79.56  Aligned_cols=202  Identities=11%  Similarity=0.014  Sum_probs=123.0

Q ss_pred             hhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC-----------CCCCCCCccccccc
Q 019865           98 ASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP-----------ITSAPSKNKLINEL  166 (334)
Q Consensus        98 a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~-----------~~~~~~~~~~~~~~  166 (334)
                      ....-+..|+++++..+...+||.+..      |+++.++...|++.-.+.+.+.           ... .+    ...+
T Consensus         7 ~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~-~~----~~~~   75 (222)
T TIGR00803         7 HIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQ-MV----QSSA   75 (222)
T ss_pred             hHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeee-cC----CCCc
Confidence            345566788899999998889998888      9999999998887532211100           000 00    0000


Q ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCch-HHHHHHHHHHHHHHHHHHHHhccCC-CCcccccCCchhhH
Q 019865          167 VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE-LMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMA  244 (334)
Q Consensus       167 ~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~~~~~~~~~~~  244 (334)
                      ......+...|....+.+.++-+...+.+++..|+.+.. ........+.+.+.........+.. ...+...  ..+..
T Consensus        76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  153 (222)
T TIGR00803        76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT  153 (222)
T ss_pred             cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence            001112446677777777777777777777765543311 1112222222222211111111111 0011100  01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865          245 IGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR  312 (334)
Q Consensus       245 ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l  312 (334)
                      ..+.-++....++.+..+.+++.++...+....++++++.+++.+++||++++.++.|+.+++.|+++
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            12222335566788889999999999999999999999999999999999999999999999988764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.54  E-value=1.8e-06  Score=78.88  Aligned_cols=128  Identities=17%  Similarity=0.147  Sum_probs=102.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH---HHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNT---LAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS   79 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~---~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   79 (334)
                      .|++.+.+++.+.++......|. .  ++||....+....   +++.++.+..  + + .+ +. +.+..+...+.|++.
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~-~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKA-F--GVDGLSVLLPQAIGMVIGGIIFNLGH--I-L-AK-PL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH-c--CCCcceehhHHHHHHHHHHHHHHHHH--h-c-cc-ch-HHHHHHHHHHHHHHH
Confidence            67999999999999999999998 3  4899988555544   3443333322  1 1 12 22 334445566688887


Q ss_pred             HHHHHHHHHHhh-ccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchh----hHHHHHHHHHHHH
Q 019865           80 CCGQMFHYFGIE-NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIV  145 (334)
Q Consensus        80 ~~~~~~~~~al~-~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~----~g~~l~l~Gv~ll  145 (334)
                      ..++.+|+.+.+ +.+++.++.+.+..|+...+++++++||+.+++      ++    +|.++.+.|+.++
T Consensus       222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHH
Confidence            888999999999 999999999999999999999999999999999      99    9999999999887

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.51  E-value=2.6e-07  Score=71.78  Aligned_cols=67  Identities=7%  Similarity=0.004  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       249 gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      ++.+.++++.++.+++++.+.+++-+...+.|+++.++|++++||++++.+++|..+++.|+.++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3456778999999999999999999999999999999999999999999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.50  E-value=4.2e-06  Score=78.52  Aligned_cols=136  Identities=13%  Similarity=0.102  Sum_probs=99.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC----------CCCcHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP----------PQLTWS   67 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----------~~~~~~   67 (334)
                      .+.+..+.++++|+...+..|..+++      +.++.....+-...+++++.|+....+.....          ....+.
T Consensus       194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~  273 (350)
T PTZ00343        194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKG  273 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchH
Confidence            47788999999999999999985442      25677777777888998888887643211000          011111


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           68 IVCRIF-LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        68 ~~~~~~-~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ...... ..++...+.+.+-|++++++++...++..++.|+++.++++++++|+++..      +++|.++.+.|+++.
T Consensus       274 ~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        274 IIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence            111122 222222455555557999999999999999999999999999999999999      999999999999876

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.50  E-value=5e-06  Score=75.18  Aligned_cols=130  Identities=18%  Similarity=0.193  Sum_probs=103.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV-YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC   81 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   81 (334)
                      .+..+.+.++++|+...+..|.. . +.++..... +.+........+... ..++   .....+.+......|+++ ..
T Consensus       154 ~g~~~~l~a~~~~a~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         154 LGLLLALAAALLWALYTALVKRL-S-RLGPVTLALLLQLLLALLLLLLFFL-SGFG---APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh-c-CCChHHHHHHHHHHHHHHHHHHHHh-cccc---ccCCHHHHHHHHHHHHHHHHH
Confidence            57788899999999999999973 3 677777776 554422222223221 1111   133456667788888888 67


Q ss_pred             HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ++.++++++++.+++.++.+..+.|++..++++++++|+++.+      +++|+++.+.|+.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~  285 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLA  285 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999      999999999999987

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.49  E-value=2e-06  Score=66.83  Aligned_cols=66  Identities=21%  Similarity=0.295  Sum_probs=61.2

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ..+.++ ...+.++..++++.|.+.+..+.++.|+++.+++++++|||++.+      |++|+.+.++|++++
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence            344455 889999999999999999999999999999999999999999999      999999999999987

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.45  E-value=2.4e-08  Score=85.78  Aligned_cols=273  Identities=15%  Similarity=0.150  Sum_probs=176.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (334)
                      ..++..++-++.||+.......   .+=+|.+-..-- .++++.+..+.++..+    |..+.+.+...++.|++...++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k---~GG~p~qQ~lGt-T~GALifaiiv~~~~~----p~~T~~~~iv~~isG~~Ws~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANK---FGGKPYQQTLGT-TLGALIFAIIVFLFVS----PELTLTIFIVGFISGAFWSFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeee---cCCChhHhhhhc-cHHHHHHHHHHheeec----CccchhhHHHHHHhhhHhhhhh
Confidence            3567788899999999988766   245666555443 3444444444443322    5667777777888888889999


Q ss_pred             HHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchh----hHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865           84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIVTLYKGLPITSAPS  158 (334)
Q Consensus        84 ~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~----~g~~l~l~Gv~ll~~~~~~~~~~~~~  158 (334)
                      ...+.++++.+++.+..+.+ ++-+-+.+++.+.++|.-+..      +.    +++++.+.|+.+-+.           
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~------~~IlG~iAliliviG~~lTs~-----------  136 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT------QIILGFIALILIVIGIYLTSK-----------  136 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch------hHHHHHHHHHHHHHhheEeee-----------
Confidence            99999999999999999966 777888899999999987776      43    344444555544311           


Q ss_pred             CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC
Q 019865          159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP  238 (334)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~  238 (334)
                        .+++...+++.++.-+|....+.+.+.|-.|.++.+...-+.-+...-....+..+++.+...   .+...  .   .
T Consensus       137 --~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~---~~~~~--~---~  206 (288)
T COG4975         137 --QDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFF---KMEKR--F---N  206 (288)
T ss_pred             --eccccccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhc---ccccc--h---H
Confidence              111112223445567899999999999999998877654221112222233344443322221   11111  1   1


Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhh----hhhHHHHhhHHhh
Q 019865          239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC----VCMILRGLQFLRI  313 (334)
Q Consensus       239 ~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~----iG~~lIi~g~~l~  313 (334)
                      +..|..++ .|+ .=+.+-..+..+-++.|.++.=.+.-+..+.+.+=+.++++|+-|..++    +|.++++.|..+.
T Consensus       207 K~t~~nii-~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         207 KYTWLNII-PGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             HHHHHHHh-hHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            11333322 222 1234566777788888988888888888999999999999999998654    5666666665543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.33  E-value=3.3e-06  Score=74.85  Aligned_cols=137  Identities=12%  Similarity=0.136  Sum_probs=110.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCccc-ccCCchhhHHHHHHHHHH
Q 019865          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR-LRPDIELMAIGYSAIFAV  253 (334)
Q Consensus       175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~-~~~~~~~~~ll~~gi~~t  253 (334)
                      ..|.++++.+-+.|+.-..+.|-+ +..+ +.++..++.+++.+..........+..+-++ ...+..+......+.+. 
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-
Confidence            579999999999999888777654 4555 8899999999999988776655544322222 22344666666666643 


Q ss_pred             HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      ..-...|.||.++.....+|.-.+++|.+.++.|.++++|+++..|++..++-.+|+....
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~  143 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT  143 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999999999888887544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.30  E-value=4e-06  Score=73.39  Aligned_cols=262  Identities=15%  Similarity=0.094  Sum_probs=172.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCC--CcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhh
Q 019865           32 SHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQ--LTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP  106 (334)
Q Consensus        32 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~--~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P  106 (334)
                      .|..+.+++.++...+-+.+.....+...   .|+  ++.+..+...-+.....+.-.+=.++++|.+++.=-+=-++..
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence            37778888888776655554433222111   022  2223223333333332333333467888999888777778889


Q ss_pred             HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHH
Q 019865          107 GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSV  186 (334)
Q Consensus       107 ~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~  186 (334)
                      +|+.++.+.++|+|-+..      -..++.+.+.|..+     |...+.             ..+.-...|.++...+++
T Consensus       140 vFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~l-----GvdqE~-------------~~~~ls~~GvifGVlaSl  195 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGL-----GVDQEG-------------STGTLSWIGVIFGVLASL  195 (347)
T ss_pred             hHHHHhHHhhcccccccc------cceeehhheehhee-----cccccc-------------ccCccchhhhHHHHHHHH
Confidence            999999999999999988      66666666555333     211110             012234689999999999


Q ss_pred             HHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCCccc--ccC-CchhhHHHHHHHHHHHHHHHHHHH
Q 019865          187 ILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRP-DIELMAIGYSAIFAVSVRSVFHTW  262 (334)
Q Consensus       187 ~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~--~~~-~~~~~~ll~~gi~~t~~~~~l~~~  262 (334)
                      +-|+..+..|+.....+| -+..+.+....+.++++|...+.+.-...+.  ..+ .+.|..+...|+++-.++|. -.+
T Consensus       196 ~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-Tg~  274 (347)
T KOG1442|consen  196 AVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-TGW  274 (347)
T ss_pred             HHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-eeE
Confidence            999999999987665443 5777888899999988888866544222222  222 23566667777766555543 124


Q ss_pred             HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          263 ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       263 al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      =+|-.+|.+-.+....--..=.+++..+++|..+..-+-+-++|+.|-......|+
T Consensus       275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            45566777777777777777799999999999999999998888887777665544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.21  E-value=1.9e-05  Score=67.22  Aligned_cols=252  Identities=12%  Similarity=0.118  Sum_probs=170.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHH
Q 019865           34 FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILA  113 (334)
Q Consensus        34 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla  113 (334)
                      +.+.+.+.+.+.+.+...-..+--+.|..+.++     .+...++....-+.--.+++|.+...-+++-++.-+..+...
T Consensus        38 flll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~-----WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          38 FLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKK-----WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhheehhhhhh-----hcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            456677777777766655433322222122222     222233333344455689999999999999999999999999


Q ss_pred             HHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHH
Q 019865          114 IIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYI  193 (334)
Q Consensus       114 ~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v  193 (334)
                      ..++|.|++..      .....++.+..-+.-..  ++...            .....+..+.|.+++...+++-+.|-.
T Consensus       113 vl~Fgg~vtsl------~l~SFilMvlSS~va~w--~D~q~------------~~~~~~~lN~GY~Wm~~NclssaafVL  172 (309)
T COG5070         113 VLFFGGRVTSL------ELLSFILMVLSSVVATW--GDQQA------------SAFKAQILNPGYLWMFTNCLSSAAFVL  172 (309)
T ss_pred             HHHhcCccchh------hHHHHHHHHHHHHHhcc--chhhH------------HHHHhcccCCceEEEehhhHhHHHHHH
Confidence            99999999988      88887776665444311  11100            001122445688899999999999988


Q ss_pred             HHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC-CCccccc-CCchhhHHHHHHHHHHHHHHHHHHHHhccCCce
Q 019865          194 VQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLR-PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPV  270 (334)
Q Consensus       194 ~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~~~~-~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~  270 (334)
                      ..|+..+--+ .....+++.-+.+..++..+...+|+. +.+.... +...+.++...|+.+. .--++-.|.++-.+.+
T Consensus       173 ~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv-giSy~saWcvrVtSST  251 (309)
T COG5070         173 IMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV-GISYCSAWCVRVTSST  251 (309)
T ss_pred             HHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh-hhhhccceeEeehhhh
Confidence            8887654221 257788999999999999999888763 2221111 1224556666776444 4455678899999999


Q ss_pred             EEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHH-hhHH
Q 019865          271 YVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRG-LQFL  311 (334)
Q Consensus       271 ~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi-~g~~  311 (334)
                      ..++..-++-.-..+-|.+++||+.+...+....+=. +|++
T Consensus       252 tySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         252 TYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             HHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999988887766543 4443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.21  E-value=4.1e-05  Score=60.99  Aligned_cols=116  Identities=16%  Similarity=0.163  Sum_probs=88.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG   82 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   82 (334)
                      ++++.+++..++-+...++.|.++. +.++.......  ...+    ...   .    .+      ......|+.. .++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~~--~~~~----~~~---~----~p------~~~i~lgl~~~~la   61 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWDF--IAAL----LAF---G----LA------LRAVLLGLAGYALS   61 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhHH--HHHH----HHH---h----cc------HHHHHHHHHHHHHH
Confidence            5788888888888999999999754 34433322211  0000    000   0    11      1245677777 999


Q ss_pred             HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHH--HhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAII--FRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~--~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      +.++.+++++.+.+.+..+.+..+.++.+.++.  ++||+++.+      +++|+++.++|++++
T Consensus        62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv  120 (129)
T PRK02971         62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLI  120 (129)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            999999999999999999999999888888875  799999999      999999999999998

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.18  E-value=4.4e-05  Score=67.11  Aligned_cols=218  Identities=15%  Similarity=0.112  Sum_probs=146.0

Q ss_pred             HHHHHHHHHhhc-cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865           81 CGQMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK  159 (334)
Q Consensus        81 ~~~~~~~~al~~-~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~  159 (334)
                      ..+.+=.+++++ .+.-.=.++-+-.++-++.+++++.|+|.+.+      |..+.++.-+|+++-++.+..+.... .+
T Consensus        76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~~-~~  148 (330)
T KOG1583|consen   76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRSK-LS  148 (330)
T ss_pred             eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhhh-hc
Confidence            334444566766 35445556667788999999999999999999      99999999999998866543322110 00


Q ss_pred             cccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC-CCcc---
Q 019865          160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN-PNAW---  234 (334)
Q Consensus       160 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~---  234 (334)
                       ..++...+.....|..|..+...+-+.-|...+.+...-+|+. ++-+.+++.-+.+.+.++..    .++ -++|   
T Consensus       149 -~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~  223 (330)
T KOG1583|consen  149 -GLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLA  223 (330)
T ss_pred             -ccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHH
Confidence             0011111223345788988888877777777777777766653 57777777777665544332    221 0011   


Q ss_pred             -----------cccCCchhhHHHHHHHHHHHHHHHHHHHHhc----cCCceEEEeccchHHHHHHHHHHHHhCCcccchh
Q 019865          235 -----------RLRPDIELMAIGYSAIFAVSVRSVFHTWALR----KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGR  299 (334)
Q Consensus       235 -----------~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~----~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~  299 (334)
                                 ...-+..|..     ++..++.|+.=.++..    +.++-++++...+.-.++.+++.+.|+.+.++..
T Consensus       224 ~~se~~~~p~~g~~vP~~~~y-----Ll~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h  298 (330)
T KOG1583|consen  224 FKSESYLIPLLGFKVPSMWVY-----LLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH  298 (330)
T ss_pred             hcCcceeccccCccccHHHHH-----HHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH
Confidence                       1111223333     3344556666555544    4566688999999999999999999999999999


Q ss_pred             hhhhHHHHhhHHhhhh
Q 019865          300 CVCMILRGLQFLRINK  315 (334)
Q Consensus       300 ~iG~~lIi~g~~l~~~  315 (334)
                      ++|+.+++.|-.+...
T Consensus       299 ~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  299 WLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887763

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.03  E-value=0.0001  Score=64.15  Aligned_cols=131  Identities=13%  Similarity=0.070  Sum_probs=108.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC   81 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~   81 (334)
                      ..+..+.+.+..||+..-+..|.+- +..+.-.=+..-+.+++++.+|+-.-....   .-.+++.+...+..|.+. .+
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~ag~---~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQAGP---ALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhhcch---hhcChHHHHHHHHHHHHhccc
Confidence            3467788899999999999999853 356666777888999999999986543221   224556566677888999 99


Q ss_pred             HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865           82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL  143 (334)
Q Consensus        82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~  143 (334)
                      .+.+-..++++.|...-++++++.|.+.++.++++++|+++..      ||+++...+++..
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsa  278 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASA  278 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999      9999988777655

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.97  E-value=0.00017  Score=66.66  Aligned_cols=137  Identities=12%  Similarity=0.020  Sum_probs=102.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCC--CcHHHHHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQ--LTWSIVCRIFLLGLLSC   80 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~   80 (334)
                      .++-+.++.+++++|..++..+. ..++.|+.++...=-+.+.++..+.....+++.. .+  .+++........++...
T Consensus       167 i~GDll~l~~a~lya~~nV~~E~-~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~~~w~~~~~~~~v~~~~~lf  244 (334)
T PF06027_consen  167 ILGDLLALLGAILYAVSNVLEEK-LVKKAPRVEFLGMLGLFGFIISGIQLAILERSGI-ESIHWTSQVIGLLVGYALCLF  244 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHHheehhhh-hccCCChhhHHHHHHHHHHHH
Confidence            45778899999999999999998 4567888887777667777776666655554433 22  33333222222222225


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~  147 (334)
                      ..+.+.-..++++++....+=.-++.++..++..+++++++++.      ..+|.++.++|.++...
T Consensus       245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence            55556677899999988888788889999999999999999999      99999999999998743

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.93  E-value=1.1e-05  Score=72.52  Aligned_cols=227  Identities=17%  Similarity=0.161  Sum_probs=129.0

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC
Q 019865           74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP  152 (334)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~  152 (334)
                      ..|.+. ..+...=|.|+.+.|++..+.+..++-+..++++..++|||++..      ..+|+.++++|-.+++... |.
T Consensus        68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~ha-P~  140 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHA-PK  140 (335)
T ss_pred             HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEec-Cc
Confidence            346666 677777788889999999999999999999999999999999999      9999999999999885422 21


Q ss_pred             CCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--chHHHHHHHHHHHHHH-------HHHH
Q 019865          153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP--AELMVTLICSIFVTIL-------SSAV  223 (334)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~l~~~i~-------~~~~  223 (334)
                      .+..   .+..+..+...+..+.   +++..--+...+-....|   +++.  +.+.......+.|..-       ...+
T Consensus       141 e~~i---~t~~el~~~~~~~~Fl---iy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~ai  211 (335)
T KOG2922|consen  141 EQEI---ESVEEVWELATEPGFL---VYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAI  211 (335)
T ss_pred             cccc---ccHHHHHHHhcCccHH---HHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence            1100   0000000001111111   111111111111111111   1221  1233333333332110       0011


Q ss_pred             HHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchH-HHHHHHHHHHHhCCccc--c---
Q 019865          224 SLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLG-MVVALVFGIAFLGDTLY--L---  297 (334)
Q Consensus       224 ~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~~~~~l~l~E~l~--~---  297 (334)
                      -+...+..+ ..  .+..|..++.... +...-....++|++..+++.++++.++. ..+++.-+.++++|--.  .   
T Consensus       212 klt~~g~~q-l~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i  287 (335)
T KOG2922|consen  212 KLTFSGNNQ-LF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI  287 (335)
T ss_pred             HHHhcCCcc-cc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence            111222221 11  1124444433332 4444555667999999999998887754 55667778888887433  2   


Q ss_pred             -hhhhhhHHHHhhHHhhhhhhHHh
Q 019865          298 -GRCVCMILRGLQFLRINKVEIMM  320 (334)
Q Consensus       298 -~~~iG~~lIi~g~~l~~~~~~~~  320 (334)
                       ..+.|+..++.|+++..+.|+..
T Consensus       288 ~~~~~Gf~ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  288 AGELCGFVTIFLGIFLLHRTKDME  311 (335)
T ss_pred             HHHHHhHHHhhheeeEeeeecccc
Confidence             45678888999999987666543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.91  E-value=5.5e-05  Score=66.33  Aligned_cols=259  Identities=12%  Similarity=0.068  Sum_probs=157.7

Q ss_pred             CCCChH--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhh
Q 019865           29 RGASHF--ILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP  106 (334)
Q Consensus        29 ~~~~p~--~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P  106 (334)
                      +++.|+  .+++.++++=..+-+..+...+.++  +..+||   ....++.+....+.+-.-++.|.+=- +.++..+.-
T Consensus        69 ~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~--r~iP~r---tY~~la~~t~gtmGLsn~SlgYLNYP-tQviFKccK  142 (367)
T KOG1582|consen   69 EGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR--RVIPWR---TYVILAFLTVGTMGLSNGSLGYLNYP-TQVIFKCCK  142 (367)
T ss_pred             ccCcccchHHHHHHHHHHHhhhheEEEeecccc--eecchh---HhhhhHhhhhhccccCcCccccccCc-HHHHHHhhh
Confidence            456654  4666666554333222222112111  223444   34444544433333334444443222 233443332


Q ss_pred             -HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHH
Q 019865          107 -GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHS  185 (334)
Q Consensus       107 -~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa  185 (334)
                       +=+++.+.++-+.|....      ...++.+...|.++.++.+..                 ..++-+..|..+.-.+-
T Consensus       143 liPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~-----------------~sPNF~~~Gv~mIsgAL  199 (367)
T KOG1582|consen  143 LIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ-----------------TSPNFNLIGVMMISGAL  199 (367)
T ss_pred             hhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc-----------------cCCCcceeeHHHHHHHH
Confidence             223445677777888888      999999999999998664321                 12223367776655555


Q ss_pred             HHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC--CchhhHHHHHHHHHHHHHHHHHHH
Q 019865          186 VILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP--DIELMAIGYSAIFAVSVRSVFHTW  262 (334)
Q Consensus       186 ~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~--~~~~~~ll~~gi~~t~~~~~l~~~  262 (334)
                      ++-|+--.++.+..+..+ +..+++++...+|.+.+......++.-.+.|+.-.  +......++.--..+.++...-.-
T Consensus       200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLa  279 (367)
T KOG1582|consen  200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLA  279 (367)
T ss_pred             HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHH
Confidence            556665566666666544 25667778888888877776666666544444321  111222222222244555666666


Q ss_pred             HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865          263 ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV  316 (334)
Q Consensus       263 al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~  316 (334)
                      .++..|+..++.++...--+++++++++|..++|....-|..+|+.|+++-...
T Consensus       280 lI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys  333 (367)
T KOG1582|consen  280 LIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS  333 (367)
T ss_pred             HHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence            778889999999999999999999999999999999999999999999976543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.89  E-value=0.00016  Score=64.56  Aligned_cols=114  Identities=14%  Similarity=0.070  Sum_probs=86.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG   82 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   82 (334)
                      .|++..++.+.+.+.....+.|.   .+.||....+=. .++.++-..+.....+    ++.+.+..++-.+.|++...+
T Consensus       137 ~kgi~~Ll~stigy~~Y~~~~~~---~~~~~~~~~lPq-aiGm~i~a~i~~~~~~----~~~~~k~~~~nil~G~~w~ig  208 (269)
T PF06800_consen  137 KKGILALLISTIGYWIYSVIPKA---FHVSGWSAFLPQ-AIGMLIGAFIFNLFSK----KPFFEKKSWKNILTGLIWGIG  208 (269)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHh---cCCChhHhHHHH-HHHHHHHHHHHhhccc----ccccccchHHhhHHHHHHHHH
Confidence            56889999999999888888887   368887777644 4443333333222111    112223335677889999999


Q ss_pred             HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceee
Q 019865           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR  124 (334)
Q Consensus        83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~  124 (334)
                      +.+++.+.+..+.+.+-.+.++.++...+.+.+++||+-++|
T Consensus       209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            999999999999999999999999999999999999998888

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.69  E-value=0.00014  Score=57.01  Aligned_cols=66  Identities=14%  Similarity=0.313  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      +...+++++++.+++++.+.+.+ +...-+.-+...+.+++++||++|+.+++|..+|+.|++..+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            44556799999999999998876 3445577788899999999999999999999999999988764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.69  E-value=0.00052  Score=55.42  Aligned_cols=131  Identities=10%  Similarity=0.072  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHH
Q 019865          178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS  257 (334)
Q Consensus       178 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~  257 (334)
                      .++.+.+...-+.....+.++.++..+|...+...+..+.+.+..+....++.  +.+...+..|+..+ -|+++. +--
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG~-~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLGV-FFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHHH-HHH
Confidence            46788888999999999999999887799999999999999888888777653  22212222333322 455443 346


Q ss_pred             HHHHHHhccCCceEEE-eccchHHHHHHHHHHH----HhCCcccchhhhhhHHHHhhHHh
Q 019865          258 VFHTWALRKKGPVYVS-MFKPLGMVVALVFGIA----FLGDTLYLGRCVCMILRGLQFLR  312 (334)
Q Consensus       258 ~l~~~al~~~~a~~~s-~~~~l~Pv~a~~~~~l----~l~E~l~~~~~iG~~lIi~g~~l  312 (334)
                      ....+..++.|++... ....-+-+.+++++.+    .-++++++.+++|.++++.|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6777888999998664 4445567777888875    34578999999999999999864

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.67  E-value=0.00025  Score=54.55  Aligned_cols=62  Identities=16%  Similarity=0.177  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865          252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI  313 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~  313 (334)
                      ..+++|++...++|+.|.+.+ +...-+--+...+.+++++||++++.+++|..+|+.|++..
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            456789999999999998865 66666777888999999999999999999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.65  E-value=0.00017  Score=55.70  Aligned_cols=66  Identities=20%  Similarity=0.226  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      +...++++.++..++++.+.+.+ +...-+.-+...+++++++||++++.+++|+.+|+.|++..+.
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34556789999999999888866 4445567777899999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.57  E-value=0.00026  Score=54.20  Aligned_cols=65  Identities=20%  Similarity=0.336  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      +.+.+.+|++...++|+.+.+.+ +...-+.-+.+.+.+++++||++|+.+++|..+|+.|++..+
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33556789999999999988865 666667788889999999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.47  E-value=0.00029  Score=53.42  Aligned_cols=64  Identities=14%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      +..++|.+...++|+.+...+ +...-+-.+...+.++++|||++++.+++|..++++|+...+.
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            445789999999999888765 6666777788899999999999999999999999999987654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.45  E-value=0.0033  Score=57.80  Aligned_cols=136  Identities=19%  Similarity=0.253  Sum_probs=109.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHH--hhccCCCC---CCcHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFI--FYRKRTPP---QLTWSIVCRIFLLGLL   78 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~~~~~~---~~~~~~~~~~~~~g~~   78 (334)
                      |+..++.+.++-|......+... ..+.++.+..++-...+.+..++....  .+......   ....+.+..+....+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            78889999999999999999754 356889999999999999888777765  22111100   0112234555666666


Q ss_pred             HHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        79 ~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      +..++.+.+.-.++.++-..+++..+.-+.+.+++.++++++++..      +|.|+.+.+.|..+-.
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~  296 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYS  296 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHH
Confidence            6888888889999999999999999999999999999999999999      9999999999988763

; GO: 0055085 transmembrane transport

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.34  E-value=0.00075  Score=52.08  Aligned_cols=108  Identities=17%  Similarity=0.214  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHH
Q 019865           10 VTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYF   88 (334)
Q Consensus        10 l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~   88 (334)
                      ++..++||.+++++|.+. .+.++..-.. |..-....     ++         .+++    .. ..+.. -.+...|++
T Consensus         2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~-----Ll---------~n~~----y~-ipf~lNq~GSv~f~~   60 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKF-----LL---------LNPK----YI-IPFLLNQSGSVLFFL   60 (113)
T ss_pred             eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHH-----HH---------HhHH----HH-HHHHHHHHHHHHHHH
Confidence            456789999999999964 3455443331 31111111     10         0121    22 23333 778889999


Q ss_pred             HhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865           89 GIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (334)
Q Consensus        89 al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l  144 (334)
                      .+...+.+.+..+. +++=++|.+.++++.+|..+++      .++|+.+.+.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence            99999999999996 5777888888988888888888      99999999999865

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.25  E-value=0.0063  Score=46.85  Aligned_cols=60  Identities=17%  Similarity=0.165  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ...+.+...++|+.|.+.+-.+-. ..-+.+.+.+.+++||+++..      |++|+.+.+.|++.+
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            788889999999999999987744 777889999999999999999      999999999999986

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.19  E-value=0.00065  Score=62.23  Aligned_cols=119  Identities=18%  Similarity=0.157  Sum_probs=86.9

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHH
Q 019865          172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIF  251 (334)
Q Consensus       172 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~  251 (334)
                      .++..|..+++.++++.+....++|+...|.+ ....-.-                ++....+.   +..|    +.|+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~~----------------~~~~~~l~---~~~W----~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRAG----------------SGGRSYLR---RPLW----WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccccc----------------chhhHHHh---hHHH----HHHHH
Confidence            45688999999999999999999999876654 1000000                00000000   0112    23333


Q ss_pred             HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      ..+++..+...|+...+++.++++..+.-+++.+++..+++|+++..++.|+.+++.|..+..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            445567777788889999999999999999999999999999999999999999999876543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.15  E-value=0.00036  Score=61.25  Aligned_cols=134  Identities=13%  Similarity=0.193  Sum_probs=106.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (334)
                      ++..+.+..++.-+..++..|. +.++.+....+.+-.+++.+.-++.+...+.... |+ .+++++....+|.+|.+++
T Consensus       191 ~gt~aai~s~lf~asvyIilR~-iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l-P~-cgkdr~l~~~lGvfgfigQ  267 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRY-IGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQL-PH-CGKDRWLFVNLGVFGFIGQ  267 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHH-hhccccEEEEehHHHHHHHHHHHHHHhhccceec-Cc-cccceEEEEEehhhhhHHH
Confidence            4456667777777778888888 6677888877777777777665555544444343 33 4455567788999999999


Q ss_pred             HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      .+...|+|..-++-.+++.++.-+++.++-.++++|.++..      .|.|+++.+...+...
T Consensus       268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVA  324 (346)
T ss_pred             HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHH
Confidence            99999999999999999999999999999999999999999      9999887776666653

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.11  E-value=0.0029  Score=48.92  Aligned_cols=65  Identities=17%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             HHHHH-HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           75 LGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        75 ~g~~~-~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ..+.+ .+.+.++..++++.|.+.+-.+ ....-+.+.+.+++++||+++..      +++|+.+.++|++.+
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l  101 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVI  101 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence            34445 8888889999999999999888 55788889999999999999999      999999999999998

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.10  E-value=0.0097  Score=48.02  Aligned_cols=127  Identities=16%  Similarity=0.157  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 019865            9 MVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHY   87 (334)
Q Consensus         9 ~l~~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   87 (334)
                      .+.+..+-+....+--. +.+... |+.-.++-+..+.+.+..+....+++.. ++.+. ..++...-|.+|...-.+..
T Consensus         6 a~~aG~~i~~q~~~N~~-L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~~-~p~w~~lGG~lG~~~V~~~~   82 (138)
T PF04657_consen    6 ALLAGALIALQAAFNGQ-LGKALGSPLVASFISFGVGFILLLIILLITGRPSL-ASLSS-VPWWAYLGGLLGVFFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhcc-CChHHhccHHHHHHHHHHHH
Confidence            34444444444444443 334454 9999999999999998888877665422 22221 12455568888888888999


Q ss_pred             HHhhccCchhhhhhhhhh-hHHHHHHHHH----HhhccceeeeccccchhhHHHHHHHHHHH
Q 019865           88 FGIENGSPALASAMIDLT-PGFTFILAII----FRMEKLELRVQSSQAKSFGTVLLIGGALI  144 (334)
Q Consensus        88 ~al~~~~~~~a~~i~~~~-P~~~~lla~~----~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l  144 (334)
                      +..++.+++.+..+.-.. -+...++..+    ..|++++.+      |.+|+++.++|+.+
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL  138 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence            999999999988776544 4555566664    456788888      99999999999864

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.09  E-value=0.0025  Score=49.96  Aligned_cols=65  Identities=20%  Similarity=0.299  Sum_probs=58.3

Q ss_pred             HHHH-HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           76 GLLS-CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        76 g~~~-~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      .+.. +..++++..++++.|.+.+-.+- ...-+.+.+.+.++++|+++..      +++|+.+.++|++.+-
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence            3444 88889999999999999999885 5888999999999999999999      9999999999999883

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.06  E-value=0.0067  Score=49.19  Aligned_cols=140  Identities=13%  Similarity=0.117  Sum_probs=97.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHH
Q 019865          175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVS  254 (334)
Q Consensus       175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~  254 (334)
                      ....+..+.+..+-....-...|+.+..++|..-....+.+|.+.+..+.+..+.++. +....+..|+..+ -|+++..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~-GG~lGa~   81 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWI-GGLLGAI   81 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHH-ccchhhh
Confidence            4567888899999999999999999888779999999999999999888877655432 2222222333322 2232222


Q ss_pred             HHHHHHHHHhccCCce-EEEeccchHHHHHHHHHHHHhC----CcccchhhhhhHHHHhhHHhhhhhh
Q 019865          255 VRSVFHTWALRKKGPV-YVSMFKPLGMVVALVFGIAFLG----DTLYLGRCVCMILRGLQFLRINKVE  317 (334)
Q Consensus       255 ~~~~l~~~al~~~~a~-~~s~~~~l~Pv~a~~~~~l~l~----E~l~~~~~iG~~lIi~g~~l~~~~~  317 (334)
                      + -..-.....|.|++ .......-+-+.+++++.+=+.    .++++..++|..++++|+++..+++
T Consensus        82 ~-vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          82 F-VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             h-hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            2 33344566777777 4456666677778888776544    5788999999999999966655443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.99  E-value=0.0023  Score=47.99  Aligned_cols=55  Identities=24%  Similarity=0.372  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHH
Q 019865          252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILR  306 (334)
Q Consensus       252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lI  306 (334)
                      ..+++++++.+++|+.+.+.+ ....-+..+...+.+.+++||++|+.++.|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            556789999999999999887 4455688889999999999999999999998875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.99  E-value=0.0032  Score=47.82  Aligned_cols=60  Identities=17%  Similarity=0.180  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           80 CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ...+.+.-.++|+.|.+.+-.+ ...--+.+.+.+++++||+++..      +++|+.+.++|++.+
T Consensus        41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~L  101 (106)
T COG2076          41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHh
Confidence            7888899999999999999877 45778899999999999999999      999999999999987

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.90  E-value=0.0058  Score=46.74  Aligned_cols=60  Identities=12%  Similarity=0.094  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ...+++...++|+.|.+.+-.+-. ..-+.+.+.+.+++||+++..      +++|+.+.++|++.+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l  100 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhh
Confidence            888889999999999999987744 778899999999999999999      999999999999987

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.80  E-value=0.0043  Score=56.90  Aligned_cols=137  Identities=10%  Similarity=0.090  Sum_probs=107.1

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHHHHH-HHHHHhhccCC---CC-CCcHHHHHHHH
Q 019865            2 GASVTAAMVTLEFLDVGLNTVTKAAM---SRGASHFILVVYSNTLAIFLLV-PSSFIFYRKRT---PP-QLTWSIVCRIF   73 (334)
Q Consensus         2 ~~~~~~~~l~~~~~wg~~~~~~k~~~---~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~---~~-~~~~~~~~~~~   73 (334)
                      +..|+.....+.+..+.-.++.|..+   ..+.++..+..+-.-++...++ |.......+..   .. ..+...+... 
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~-  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL-  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH-
Confidence            35678888999999999999999866   3468999999999899998888 88766443221   11 3333333333 


Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ....+..+.+..-|..++++|+-.=++....=-.++...++++++|+++..      +..|..+++.|+.+-
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y  305 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLY  305 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHH
Confidence            333555778889999999999988888887777777888999999999999      999999999999986

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.45  E-value=0.12  Score=48.04  Aligned_cols=143  Identities=15%  Similarity=0.041  Sum_probs=90.9

Q ss_pred             cchhHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHH-HHHHHHh--hccCC----CCCCc
Q 019865            3 ASVTAAMVTLEFLDVGLN-------TVTKAAMSRGASHFILVVYSNT---LAIFLL-VPSSFIF--YRKRT----PPQLT   65 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~-------~~~k~~~~~~~~p~~~~~~R~~---~a~l~l-~~~~~~~--~~~~~----~~~~~   65 (334)
                      .|++..++++.+..+..+       +.-+.+...+.+|.....-.+.   ++..+. +.++.++  ++++.    ..+.+
T Consensus       173 ~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~  252 (345)
T PRK13499        173 KKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLA  252 (345)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcccc
Confidence            678888888888877777       5555544456777765555544   444433 3333322  11111    01112


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhh---hh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHH
Q 019865           66 ----WSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASA---MI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL  137 (334)
Q Consensus        66 ----~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~---i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l  137 (334)
                          .++.....+-|++....+.+|..+-+..+.+.+..   +. ++.-++..+.+. ++||+-+-.|+....-++|+++
T Consensus       253 ~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vl  331 (345)
T PRK13499        253 KPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVV  331 (345)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHH
Confidence                23333346666666888889999888886665555   55 555577777777 5999988555566668899999


Q ss_pred             HHHHHHHHH
Q 019865          138 LIGGALIVT  146 (334)
Q Consensus       138 ~l~Gv~ll~  146 (334)
                      .+.|..++.
T Consensus       332 iI~g~~lig  340 (345)
T PRK13499        332 IILAANIVG  340 (345)
T ss_pred             HHHHHHHHh
Confidence            999988873

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.28  E-value=0.045  Score=40.91  Aligned_cols=52  Identities=21%  Similarity=0.152  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHH
Q 019865           80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL  137 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l  137 (334)
                      +..+.++..++++.|.+.+-.+. ....+.+.+.+.+++||+++.+      |+.|+.+
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            88889999999999999997664 5889999999999999999999      9999865

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.87  E-value=0.023  Score=43.92  Aligned_cols=109  Identities=8%  Similarity=-0.082  Sum_probs=74.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHH
Q 019865          183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTW  262 (334)
Q Consensus       183 ~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~  262 (334)
                      +-++.|+..+-+.||..++.++...-+  +..-... .    +..     +|.     .+.     .+.....+..+|++
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~~~-~----Ll~-----n~~-----y~i-----pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL--QLLQEIK-F----LLL-----NPK-----YII-----PFLLNQSGSVLFFL   60 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH--HHHHHHH-H----HHH-----hHH-----HHH-----HHHHHHHHHHHHHH
Confidence            346788999999999887655222211  2111111 1    111     111     111     22334457788899


Q ss_pred             HhccCCceEEEecc-chHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865          263 ALRKKGPVYVSMFK-PLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI  313 (334)
Q Consensus       263 al~~~~a~~~s~~~-~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~  313 (334)
                      .+++.+-+.+.++. .+.=+++.+.++++.+|..++..++|+++|+.|+.+.
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999995 8899999999988888888889999999999998653

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.64  E-value=0.0052  Score=53.47  Aligned_cols=132  Identities=11%  Similarity=0.010  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHH
Q 019865          177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR  256 (334)
Q Consensus       177 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~  256 (334)
                      +.+.+++=++.|+..-....+.-.   +|..-+....+ ++++......++-.+...+.     .++.-...|++ =.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~-GALifaiiv~~~~~p~~T~~-----~~iv~~isG~~-Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTL-GALIFAIIVFLFVSPELTLT-----IFIVGFISGAF-WSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccH-HHHHHHHHHheeecCccchh-----hHHHHHHhhhH-hhhh
Confidence            456677778888776655443322   25544443333 33333333323222211111     23333344443 3368


Q ss_pred             HHHHHHHhccCCceEEEeccc-hHHHHHHHHHHHHhCCcccchhh-h---hhHHHHhhHHhhhhhhH
Q 019865          257 SVFHTWALRKKGPVYVSMFKP-LGMVVALVFGIAFLGDTLYLGRC-V---CMILRGLQFLRINKVEI  318 (334)
Q Consensus       257 ~~l~~~al~~~~a~~~s~~~~-l~Pv~a~~~~~l~l~E~l~~~~~-i---G~~lIi~g~~l~~~~~~  318 (334)
                      +..++++++..|.+++.++.. .+-+-+.+++.+.|||..++.++ +   +.++++.|+++.+++|+
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            999999999999999998765 56777899999999999998754 3   45678899999998776

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.62  E-value=1.9  Score=39.92  Aligned_cols=296  Identities=15%  Similarity=0.068  Sum_probs=162.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhc-cCC---CCCCcHHHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYR-KRT---PPQLTWSIVCRIFLLGLLS   79 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~~   79 (334)
                      .+++...+..++-|..++-.|. . ++.+=...-.....++-+ +.|.....-. +..   ....+...+.+..+.|++.
T Consensus         7 ~Gii~h~iGg~~~~sfy~P~kk-v-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lW   83 (344)
T PF06379_consen    7 LGIIFHAIGGFASGSFYVPFKK-V-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLW   83 (344)
T ss_pred             HHHHHHHHHHHHhhhhccchhh-c-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHH
Confidence            3567778888889999999998 3 355544444444444443 4444322111 000   0123445667778889888


Q ss_pred             HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccce-eeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCC
Q 019865           80 CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLE-LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAP  157 (334)
Q Consensus        80 ~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~-~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~  157 (334)
                      ..+.+.|=.+++|...+...-+ ..+.-.+-.++-.++.++--. ......+...+|++++++|+.+..-. |.      
T Consensus        84 GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~------  156 (344)
T PF06379_consen   84 GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-GS------  156 (344)
T ss_pred             hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-HH------
Confidence            8888999999999988877644 446666666665555432100 11122345899999999999998432 21      


Q ss_pred             CCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH-------hhCCchH----HHHHHHHHHHHHHHHHHHHh
Q 019865          158 SKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIV-------RDYPAEL----MVTLICSIFVTILSSAVSLV  226 (334)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~-------~~~~~~~----~~~~~~~l~~~i~~~~~~l~  226 (334)
                        .++.+...+.++.+..+|.+.++.+.+.-|..++-...-.       +.-.++.    ......+.-+.+.-....++
T Consensus       157 --~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~  234 (344)
T PF06379_consen  157 --MKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLI  234 (344)
T ss_pred             --hhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHH
Confidence              1111112223455678999999999887777765432210       1000121    11223333444444444433


Q ss_pred             c---cCCCC---cccccCC---chhhHHHHHHHHHHHHHHHHHHHHhccCCce--E--EEeccchHHHHHHHHHHHHhCC
Q 019865          227 A---EKNPN---AWRLRPD---IELMAIGYSAIFAVSVRSVFHTWALRKKGPV--Y--VSMFKPLGMVVALVFGIAFLGD  293 (334)
Q Consensus       227 ~---~~~~~---~~~~~~~---~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~--~--~s~~~~l~Pv~a~~~~~l~l~E  293 (334)
                      .   .++.+   +++...+   ......+..|+ -=...+.+|-++-.+.++.  .  -.+...+..+++-+++.+ ++|
T Consensus       235 ~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkE  312 (344)
T PF06379_consen  235 LLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKE  312 (344)
T ss_pred             HHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHH
Confidence            2   12211   1211111   12222333343 2234566666777777754  2  244556677778888865 677


Q ss_pred             ccc------chhhhhhHHHHhhHHhh
Q 019865          294 TLY------LGRCVCMILRGLQFLRI  313 (334)
Q Consensus       294 ~l~------~~~~iG~~lIi~g~~l~  313 (334)
                      --.      ...++|+.+++.++.++
T Consensus       313 WKg~s~kt~~vl~~G~~vlI~s~~iv  338 (344)
T PF06379_consen  313 WKGASKKTIRVLVLGIAVLILSVVIV  338 (344)
T ss_pred             hccCCcccHHHHHHHHHHHHHHHHHH
Confidence            322      33567777776666554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=95.37  E-value=0.081  Score=46.14  Aligned_cols=64  Identities=14%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865           74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL  143 (334)
Q Consensus        74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~  143 (334)
                      ...+..+....+..+.++|.++..-+....+.++++.+++.++++|+++..      +++|+.+.+.|+.
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~  220 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF  220 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence            444445778888999999999999999999999999999999999999999      9999999888764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.14  E-value=0.3  Score=44.07  Aligned_cols=134  Identities=14%  Similarity=0.160  Sum_probs=102.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-----CcHHHHHHHHHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQ-----LTWSIVCRIFLLGL   77 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~   77 (334)
                      .+++.+..--+.-|.++...+... ..++++..+.+.-++..++.-.......+. .+ +.     .+.+.++-+++..+
T Consensus       172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~-~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LL-PAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-Cc-hHHHHHHcChhHHHHHHHHHH
Confidence            456666666667777777766523 246899999999999888876666433221 11 21     23444566788888


Q ss_pred             HHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        78 ~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      +++.++.+.|+-++.-++-.-+.++.+-=++..+++.+.++++++..      ||+|+.+-+.|+.+=
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLE  311 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHH
Confidence            89999999999999988888888888999999999999999999999      999999988887764

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.08  E-value=0.51  Score=42.06  Aligned_cols=136  Identities=13%  Similarity=0.015  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM   84 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   84 (334)
                      ++++.+++.+++|++++-.|. . +.-|++.+-++-.....+.-+......+   . ++..    .+.++-|.+.+.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~-~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~---~-p~f~----p~amlgG~lW~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKK-F-DTGDGFFFQWVMCSGIFLVGLVVNLILG---F-PPFY----PWAMLGGALWATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEe-c-cCCCcHHHHHHHHHHHHHHHHHHHHhcC---C-Ccce----eHHHhhhhhhhcCce
Confidence            467889999999999999998 3 3567866655544333333233332221   1 3322    345666777788999


Q ss_pred             HHHHHhhccCchhhhhhhhhhhHHHH-HHHHH-HhhccceeeeccccchhhHHHHHHHHHHHHHHhcCC
Q 019865           85 FHYFGIENGSPALASAMIDLTPGFTF-ILAII-FRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL  151 (334)
Q Consensus        85 ~~~~al~~~~~~~a~~i~~~~P~~~~-lla~~-~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~  151 (334)
                      +-.-.++..+.+.+..+-++.-+.+- ..+.+ +++++...- .......+|++++++|..+..+.+.+
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCC
Confidence            99999999999999988776544443 33333 344333221 11223788999999998887554433

The region concerned is approximately 280 residues long.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.98  E-value=0.46  Score=38.60  Aligned_cols=130  Identities=15%  Similarity=0.077  Sum_probs=78.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 019865            8 AMVTLEFLDVGLNTVTKAAMSRGA-SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFH   86 (334)
Q Consensus         8 ~~l~~~~~wg~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   86 (334)
                      ..+++..+-.....+--. +.+.. +|+...++.+..+...+..+.+.+.++.. .....+..+|...-|.+|..+-..-
T Consensus         9 ~~i~aG~~l~~Q~~iN~q-L~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lGa~~vt~s   86 (150)
T COG3238           9 FAILAGALLPLQAAINGR-LARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLGAIFVTSS   86 (150)
T ss_pred             HHHHHhhhhhhHHHHHHH-HHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchhhhhhhhh
Confidence            334444444444333333 22233 59999999999999998888877433222 2222333356666777776666666


Q ss_pred             HHHhhccCchhhhhh-hhhhhHHHHHHHHH-Hh---hccceeeeccccchhhHHHHHHHHHHHH
Q 019865           87 YFGIENGSPALASAM-IDLTPGFTFILAII-FR---MEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        87 ~~al~~~~~~~a~~i-~~~~P~~~~lla~~-~~---~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ........++....+ ..-+-+...++..+ ++   +++++..      +++|+++.++|++++
T Consensus        87 ~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~  144 (150)
T COG3238          87 ILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA  144 (150)
T ss_pred             HHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence            666677766666554 33445555555544 22   3556666      999999999995554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.85  E-value=0.24  Score=46.02  Aligned_cols=136  Identities=12%  Similarity=0.123  Sum_probs=100.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCCcHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFY---RKRTPPQLTWSIVCRIFLL   75 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~----~~p~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~   75 (334)
                      ..+-++.++++++.|...++.|. -..+    .|--.+-.+=-++..++++|..+...   .++. +-.+..+...+++.
T Consensus       246 llG~llaL~sA~~YavY~vllk~-~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F-~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKR-KIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF-ELPSSTQFSLVVFN  323 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-hcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cCCCCceeEeeeHh
Confidence            34677889999999999999997 2222    33333333333555666665544432   2222 11223334557788


Q ss_pred             HHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           76 GLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        76 g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      ++++ ....++|-+|.-.+++-.+++=++++-...++...++.+.+++..      .++|.+..++|.+.+.
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVN  389 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhhee
Confidence            8999 999999999999999999999999888888888899988899999      9999999999988873

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.51  E-value=0.023  Score=51.44  Aligned_cols=119  Identities=15%  Similarity=0.159  Sum_probs=90.4

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-ccCCCCcccccCCchhhHHHHH
Q 019865          170 PLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLV-AEKNPNAWRLRPDIELMAIGYS  248 (334)
Q Consensus       170 ~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~-~~~~~~~~~~~~~~~~~~ll~~  248 (334)
                      .+.++.+|..+.+.+++..+...++.|+..+|.. ..                 ..- .+++.....     +  ..-|.
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~~-----------------~~ra~~gg~~yl~-----~--~~Ww~   69 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-AS-----------------GLRAGEGGYGYLK-----E--PLWWA   69 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHh-hh-----------------cccccCCCcchhh-----h--HHHHH
Confidence            3556688999999999999999999888776643 10                 000 111111111     1  12256


Q ss_pred             HHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865          249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI  313 (334)
Q Consensus       249 gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~  313 (334)
                      |++...++-.+.+.++...+++.++++..+.-+.+.+++..+++|++++...+|+.+.++|-.+.
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i  134 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI  134 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence            77777888888888888999999999999999999999999999999999999999988775544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.31  E-value=1  Score=41.03  Aligned_cols=138  Identities=13%  Similarity=0.119  Sum_probs=100.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCC-cHHHHHHHHHHH
Q 019865            3 ASVTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQL-TWSIVCRIFLLG   76 (334)
Q Consensus         3 ~~~~~~~l~~~~~wg~~~~~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~-~~~~~~~~~~~g   76 (334)
                      ..+|.++....+.=+......|...+ .+.+-+.+.++-.+.+...+....++.+...    ..+.. ....+....+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            34788888888888888888887433 3466778899999999887777765554311    00111 123345666777


Q ss_pred             HHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        77 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      +++..-+++-+++.+..|+..-++.....-..+.+...++.+++.++.      ..+|+.+++.|-++-.
T Consensus       236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence            777777789999999999988888885555555566666778889999      9999999999988763

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.05  E-value=0.037  Score=46.65  Aligned_cols=63  Identities=17%  Similarity=0.128  Sum_probs=57.7

Q ss_pred             HHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865          256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI  318 (334)
Q Consensus       256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~  318 (334)
                      +-++|..++++++|+.++.+..-+-.+..+++++++||++....++..++-+.|+++....+.
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            467889999999999999999999999999999999999999999999999999998875543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=92.76  E-value=0.12  Score=46.04  Aligned_cols=63  Identities=11%  Similarity=0.165  Sum_probs=56.9

Q ss_pred             HHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhh
Q 019865          255 VRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVE  317 (334)
Q Consensus       255 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~  317 (334)
                      +.-.+.+.++++.+|+..-+......+++.++++++++.+++..|+.+..+...|+.++....
T Consensus        29 ~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   29 IQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            445677789999999999999999999999999999999999999999999999999876443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=91.75  E-value=4.3  Score=36.94  Aligned_cols=136  Identities=17%  Similarity=0.116  Sum_probs=83.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhccCCC---C---CC----cHHHH
Q 019865            4 SVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---P---QL----TWSIV   69 (334)
Q Consensus         4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~----~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~---~~----~~~~~   69 (334)
                      .+++....+.++-|.=+.+.+..++++    -+|+...+.-.-.-.+.+.|..+..+.....   +   ..    ..+..
T Consensus       164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~  243 (349)
T KOG1443|consen  164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVI  243 (349)
T ss_pred             hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHH
Confidence            467778888888888888888755532    2466666555555555566665544332110   0   01    11222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           70 CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        70 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      ..+...|.+...--..-|.=+..|++-..++..-.-=+.+.+++..+.+|+++..      .|.|..++..|+.+=
T Consensus       244 g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  244 GLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence            2222222222222222233345555555555555667888999999999999999      999999999998875

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.74  E-value=0.44  Score=41.47  Aligned_cols=129  Identities=18%  Similarity=0.206  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCcHHHHHHHHHHHHHHHHH
Q 019865            9 MVTLEFLDVGLNTVTKAAMSRG--ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP----PQLTWSIVCRIFLLGLLSCCG   82 (334)
Q Consensus         9 ~l~~~~~wg~~~~~~k~~~~~~--~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~   82 (334)
                      +++.-..-|.+...... ...+  -+.-.+.++-++-+.+.+..-+++.+. .+.    .......++.+...|+.++++
T Consensus       177 L~lSL~mDGlTg~~Qdr-ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai~s~LG  254 (337)
T KOG1580|consen  177 LILSLAMDGLTGSIQDR-IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAIASCLG  254 (337)
T ss_pred             HHHHHHhcccchhHHHH-HHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence            34444455555555443 1212  234456666666666655544443321 000    001123344566778888999


Q ss_pred             HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      +.+.|.-..+-++-.-+++..+--.|+.+.+.++++..++.|      ||+|..+.+.|...=
T Consensus       255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTAD  311 (337)
T ss_pred             hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhH
Confidence            999999999999999999999999999999999999999999      999999999887654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=90.40  E-value=1.9  Score=37.35  Aligned_cols=136  Identities=16%  Similarity=0.140  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCcHHHHHHHHHHHHHHH
Q 019865            5 VTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSC   80 (334)
Q Consensus         5 ~~~~~l~~~~~wg~~~~~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~   80 (334)
                      +|+++..-++.=+..-..+|.-.. .+..-++-.++..+++...+..+.++.+.+..   ...++...+.+.++.|+...
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            455555544444444444554111 34556788899999999888888776554322   12344555567888888886


Q ss_pred             HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      .-.++--|..+-+++..-+.+..++-.-..+-+.++++|+.+..      .+.++.+++....+-.
T Consensus       236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa  295 (309)
T COG5070         236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA  295 (309)
T ss_pred             hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence            66678889999999999899988888888888999999999999      9999999987766653

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=89.46  E-value=7.7  Score=29.41  Aligned_cols=116  Identities=22%  Similarity=0.249  Sum_probs=74.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCCCChHHH--HHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865            6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFIL--VVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ   83 (334)
Q Consensus         6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~--~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   83 (334)
                      ...++...++||.++++.|.+ +.+++..--  .-+|.++           +.-+.  --.+++.    .+--.++-.+.
T Consensus         5 ~~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~l-----------qe~~t--l~l~w~Y----~iPFllNqcgS   66 (125)
T KOG4831|consen    5 MDKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIAL-----------QEMKT--LFLNWEY----LIPFLLNQCGS   66 (125)
T ss_pred             HHHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHH-----------HHHHH--HHHhHHH----HHHHHHHHhhH
Confidence            456788899999999999984 323322110  1122110           01000  1122332    22333445566


Q ss_pred             HHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865           84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV  145 (334)
Q Consensus        84 ~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll  145 (334)
                      .+||.-+++++-+.+..+.+ +.-.|+.+.+..+..|...++      ..+|..+.++|+.+.
T Consensus        67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence            78999999999999998866 556788888887766667777      889999888887764

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=83.84  E-value=0.89  Score=34.35  Aligned_cols=32  Identities=16%  Similarity=0.126  Sum_probs=27.2

Q ss_pred             HHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865          284 LVFGIAFLGDTLYLGRCVCMILRGLQFLRINK  315 (334)
Q Consensus       284 ~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~  315 (334)
                      ..++.++++|++++.++.|..+++.+++.+.|
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiFr  108 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIFR  108 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhheeeC
Confidence            45677899999999999999999988876543

>PRK02237 hypothetical protein; Provisional

Probab=81.94  E-value=4  Score=31.10  Aligned_cols=42  Identities=7%  Similarity=-0.099  Sum_probs=34.9

Q ss_pred             EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865          273 SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN  314 (334)
Q Consensus       273 s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~  314 (334)
                      +.+.-+-.+.++++++.+-|++|+..+++|..+.+.|+.++.
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~  104 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM  104 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence            344455677889999999999999999999999999886653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	334
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.01
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.64
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.48
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.47

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.01  E-value=1.9e-10  Score=91.38  Aligned_cols=70  Identities=19%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEEec-cchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhh
Q 019865          248 SAIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVE  317 (334)
Q Consensus       248 ~gi~~t~~~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~  317 (334)
                      .++++++++|++|.+++++.+++++.++ ..+.|+++.+++++++||++++.+++|+++|+.|+++.++.+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5567888999999999999999999998 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.64  E-value=2.3e-08  Score=76.58  Aligned_cols=70  Identities=19%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEEec-cchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhh
Q 019865          248 SAIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVE  317 (334)
Q Consensus       248 ~gi~~t~~~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~  317 (334)
                      .++++.+++|.++.+++|+.+.+++.++ ..+.|+++.+++++++||++++.+++|..+|+.|+++.+..+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556778899999999999999999888 899999999999999999999999999999999999887654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.48  E-value=3e-07  Score=72.88  Aligned_cols=68  Identities=19%  Similarity=0.265  Sum_probs=52.1

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865           74 LLGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL  147 (334)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~  147 (334)
                      +.+.+. +++++++.+++++.|++.+..+ .++.|++++++++++++|+++.+      +++|+++.++|++++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            456666 8999999999999999999999 89999999999999999999999      99999999999999854

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.47  E-value=2.3e-06  Score=65.31  Aligned_cols=67  Identities=18%  Similarity=0.249  Sum_probs=61.7

Q ss_pred             HHHHHH-HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865           74 LLGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT  146 (334)
Q Consensus        74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~  146 (334)
                      +.+.+. ..++.++.+++++.|.+.+..+ ..+.|+++.+++++++||+++.+      |++|+.+.++|++++.
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            455555 8899999999999999999998 79999999999999999999999      9999999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00