Citrus Sinensis ID: 019877

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
MAISTSTVSSSNLLSFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSAQNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNSTVSKTLG
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHccccEEEEEcccccHHHHHHcccccEEEEccccccccccccc
ccEEcccccccccccccccccccccccccccHHccccccccccEEEEEccccccccccccccccccccccccccEEEEcccccccccccEEEEEEEEcHHHHcccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHcHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEHEEHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHccHEEEEEccccccEcccccccccccEHccccHHHHHHcccccccHHHHHHHHHccccEEEEEccccccHHHHEcccccEEEEcccccHEHHHccc
maiststvsssnllsfsstlgssrihrsslmsfhnhqqtsngrlvvnccsssdmgsaqnptngrqpqmssmspfgvtlndngmskpsyKWQRVLLKVSgealagdhtqnidpKITMAIAREVASVTRLGIEVAIVVGGgnifrgasaagnsgldrssaDYIGMLATVMNAIFLQAtmesigiptRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFaagtgnpffttDTAAALRCAEINAEVVLKAtnvdgvyddnprrnpnarllDTLTYQevtskdlsvMDMTAITlcqennipvvvfnlnqpgniakaiqgervgtliggtwnstvsktlg
maiststvsssnllSFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSAQNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEAlagdhtqnidpkITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIfaagtgnpfFTTDTAAALRCAEINAEVVlkatnvdgvyddnprrnpnarlldtlTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAiqgervgtliggtwnstvsktlg
MAIststvsssnllsfsstlgssRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSAQNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNSTVSKTLG
********************************************VVNC***************************************YKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDN****PNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWN********
*******************************************************************************************RVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW*********
**************SFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSS******************SMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNSTVSKTLG
*********SS*LLSFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSS*****************SSMSPFGVTLN*NGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNSTV*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAISTSTVSSSNLLSFSSTLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSAQNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNSTVSKTLG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query334 2.2.26 [Sep-21-2011]
Q2JS42254 Uridylate kinase OS=Synec yes no 0.706 0.929 0.648 2e-89
Q10Y48244 Uridylate kinase OS=Trich yes no 0.709 0.971 0.638 9e-89
Q2JJE2253 Uridylate kinase OS=Synec yes no 0.700 0.924 0.649 3e-88
P74457260 Uridylate kinase OS=Synec N/A no 0.709 0.911 0.646 5e-88
Q3MFI4242 Uridylate kinase OS=Anaba yes no 0.700 0.966 0.634 1e-85
Q8YXK5242 Uridylate kinase OS=Nosto yes no 0.700 0.966 0.634 1e-85
Q7V6C2237 Uridylate kinase OS=Proch yes no 0.691 0.974 0.642 3e-85
Q2IMM2251 Uridylate kinase OS=Anaer yes no 0.712 0.948 0.610 4e-85
Q3AV98237 Uridylate kinase OS=Synec yes no 0.697 0.983 0.645 6e-85
A2C7Q3237 Uridylate kinase OS=Proch yes no 0.691 0.974 0.637 8e-85
>sp|Q2JS42|PYRH_SYNJA Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pyrH PE=3 SV=1 Back     alignment and function desciption
 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 189/236 (80%)

Query: 89  KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAA 148
           K++R+LLK+SGEAL G+    IDP++  +IA EVASV R G++VAIVVGGGNI+RG   A
Sbjct: 2   KYRRILLKLSGEALMGERPYGIDPEVLQSIASEVASVVRAGVQVAIVVGGGNIWRGRKEA 61

Query: 149 GNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHL 208
              G+D++SADY+GMLATV+NA+ LQ  +E  GIPTRVQTA  M EVAEPYIRRRA+RHL
Sbjct: 62  AAQGMDQASADYVGMLATVINALTLQDAIERAGIPTRVQTAIAMQEVAEPYIRRRAIRHL 121

Query: 209 EKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDT 268
           EKGRVVIF AG+GNPFFTTDT AALR AEI+AEV+ KAT VDGVYD +P+ +P AR  D 
Sbjct: 122 EKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPKTHPQARRYDV 181

Query: 269 LTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGT 324
           L+YQ+V ++DL VMD TAI LC+EN +P+VVF+L  PGNI + +QGE +GT IG T
Sbjct: 182 LSYQDVLTRDLRVMDSTAIALCKENQLPIVVFDLTTPGNIYRVVQGEPIGTWIGQT 237
Catalyzes the reversible phosphorylation of UMP to UDP.
Synechococcus sp. (strain JA-3-3Ab) (taxid: 321327)
EC: 2EC: .EC: 7EC: .EC: 4EC: .EC: 2EC: 2
>sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q2JJE2|PYRH_SYNJB Uridylate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|P74457|PYRH_SYNY3 Uridylate kinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q3MFI4|PYRH_ANAVT Uridylate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q8YXK5|PYRH_NOSS1 Uridylate kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q7V6C2|PYRH_PROMM Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q2IMM2|PYRH_ANADE Uridylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|Q3AV98|PYRH_SYNS9 Uridylate kinase OS=Synechococcus sp. (strain CC9902) GN=pyrH PE=3 SV=1 Back     alignment and function description
>sp|A2C7Q3|PYRH_PROM3 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pyrH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
255552374328 Uridylate kinase, putative [Ricinus comm 0.973 0.990 0.794 1e-148
225431539332 PREDICTED: uridylate kinase-like [Vitis 0.886 0.891 0.842 1e-143
356512819331 PREDICTED: uridylate kinase-like [Glycin 0.901 0.909 0.783 1e-140
356525588325 PREDICTED: uridylate kinase-like [Glycin 0.832 0.855 0.85 1e-138
449461831341 PREDICTED: uridylate kinase-like [Cucumi 0.904 0.885 0.794 1e-137
255637835325 unknown [Glycine max] 0.832 0.855 0.835 1e-136
217074196324 unknown [Medicago truncatula] 0.835 0.861 0.830 1e-133
15230160339 uridylate kinase [Arabidopsis thaliana] 0.754 0.743 0.904 1e-132
297830522334 aspartate/glutamate/uridylate kinase fam 0.754 0.754 0.904 1e-131
296088581255 unnamed protein product [Vitis vinifera] 0.763 1.0 0.890 1e-131
>gi|255552374|ref|XP_002517231.1| Uridylate kinase, putative [Ricinus communis] gi|223543602|gb|EEF45131.1| Uridylate kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/335 (79%), Positives = 292/335 (87%), Gaps = 10/335 (2%)

Query: 1   MAISTSTVSSSNLLSFSST---LGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSA 57
           MAISTS    + L   S +   LG  +IH    M  H+   T NGRL+++CCS  DMG+ 
Sbjct: 1   MAISTSFAPINTLNPVSPSYYSLGPFKIHHPRFMRAHS---TPNGRLLIHCCS--DMGAT 55

Query: 58  QNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMA 117
             P + RQ QM+SM+ FG  +N+  +S+PSYKWQRVLLKVSGEALAGD TQNIDPKITMA
Sbjct: 56  SEPMSIRQAQMTSMAAFG--MNETSLSRPSYKWQRVLLKVSGEALAGDRTQNIDPKITMA 113

Query: 118 IAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATM 177
           IAREVASVTRLG+EVAIVVGGGNIFRG+S AG+SGLDRSSADYIGMLATVMNAIFLQATM
Sbjct: 114 IAREVASVTRLGVEVAIVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATM 173

Query: 178 ESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE 237
           ESIGIPTRVQTAFRMSEVAEPYIRRRA+RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE
Sbjct: 174 ESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE 233

Query: 238 INAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPV 297
           INAEVVLKATNVDGVYDD+PR NPNARLLDTLT+ EVTSKDLSVMDMTAITLCQENNIPV
Sbjct: 234 INAEVVLKATNVDGVYDDDPRHNPNARLLDTLTFHEVTSKDLSVMDMTAITLCQENNIPV 293

Query: 298 VVFNLNQPGNIAKAIQGERVGTLIGGTWNSTVSKT 332
           VVFNL++PGNI+KAI GERVGTLIGGT NSTV++T
Sbjct: 294 VVFNLSEPGNISKAILGERVGTLIGGTRNSTVART 328

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225431539|ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356512819|ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|356525588|ref|XP_003531406.1| PREDICTED: uridylate kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|449461831|ref|XP_004148645.1| PREDICTED: uridylate kinase-like [Cucumis sativus] gi|449507502|ref|XP_004163050.1| PREDICTED: uridylate kinase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255637835|gb|ACU19237.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|217074196|gb|ACJ85458.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|15230160|ref|NP_188498.1| uridylate kinase [Arabidopsis thaliana] gi|9293891|dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gi|15292789|gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gi|20258857|gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gi|332642610|gb|AEE76131.1| uridylate kinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297830522|ref|XP_002883143.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297830524|ref|XP_002883144.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328983|gb|EFH59402.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328984|gb|EFH59403.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|296088581|emb|CBI37572.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
TAIR|locus:2093949339 AT3G18680 [Arabidopsis thalian 0.898 0.884 0.791 4.6e-121
TIGR_CMR|CHY_1785242 CHY_1785 "uridylate kinase" [C 0.709 0.979 0.606 1.7e-75
TIGR_CMR|GSU_1919239 GSU_1919 "uridylate kinase" [G 0.712 0.995 0.572 7.7e-71
TIGR_CMR|BA_3963240 BA_3963 "uridylate kinase" [Ba 0.712 0.991 0.566 1.7e-68
TIGR_CMR|DET_0375241 DET_0375 "uridylate kinase" [D 0.694 0.962 0.555 2.6e-63
TIGR_CMR|CBU_1384243 CBU_1384 "uridylate kinase" [C 0.709 0.975 0.514 1e-61
UNIPROTKB|P65929261 pyrH "Uridylate kinase" [Mycob 0.688 0.881 0.525 1.6e-61
TIGR_CMR|SPO_1662251 SPO_1662 "uridylate kinase" [R 0.715 0.952 0.524 3.4e-61
TAIR|locus:2100108542 AT3G10030 [Arabidopsis thalian 0.796 0.490 0.494 1.9e-60
TIGR_CMR|ECH_0266244 ECH_0266 "uridylate kinase" [E 0.712 0.975 0.495 8.1e-60
TAIR|locus:2093949 AT3G18680 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 243/307 (79%), Positives = 270/307 (87%)

Query:    32 SFHNHQQTSNGRLVVNCCSS--SDMGSAQNPTNGRQ----PQMSSMSPFGVTLNDNGMSK 85
             +F ++Q  S  R++++C SS  SD GS+ +  NG        ++  S F    + +G SK
Sbjct:    33 TFFSNQNYSR-RVLISCSSSLSSDNGSSPDSMNGNGNGNGSSLNGQSSFPRLPSFDGTSK 91

Query:    86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA 145
             P  KW+RVLLKVSGEALAGD  QNIDPK+TMAIAREVA+VTRLGIEVAIVVGGGNIFRG+
Sbjct:    92 PPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGS 151

Query:   146 SAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAV 205
             + AG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRA+
Sbjct:   152 TWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAI 211

Query:   206 RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARL 265
             RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGV+DD+P+RNPNARL
Sbjct:   212 RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPKRNPNARL 271

Query:   266 LDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 325
             LD+LTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNL++PGNIAKAI+GERVGTLIGGTW
Sbjct:   272 LDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGTW 331

Query:   326 NSTVSKT 332
             NS V+ T
Sbjct:   332 NSIVTTT 338
GO:0006221 "pyrimidine nucleotide biosynthetic process" evidence=IEA;ISS
GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA
GO:0009041 "uridylate kinase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0033862 "UMP kinase activity" evidence=IEA
GO:0006364 "rRNA processing" evidence=RCA
GO:0006399 "tRNA metabolic process" evidence=RCA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA
GO:0009658 "chloroplast organization" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA
GO:0045036 "protein targeting to chloroplast" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
GO:0048481 "ovule development" evidence=RCA
TIGR_CMR|CHY_1785 CHY_1785 "uridylate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1919 GSU_1919 "uridylate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3963 BA_3963 "uridylate kinase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0375 DET_0375 "uridylate kinase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1384 CBU_1384 "uridylate kinase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P65929 pyrH "Uridylate kinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1662 SPO_1662 "uridylate kinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2100108 AT3G10030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0266 ECH_0266 "uridylate kinase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2BVI4PYRH_PROM52, ., 7, ., 4, ., 2, 20.60340.69160.9871yesno
Q0BTM0PYRH_GRABC2, ., 7, ., 4, ., 2, 20.59480.68560.9308yesno
Q8DM63PYRH_THEEB2, ., 7, ., 4, ., 2, 20.61340.70950.9793yesno
Q3ALP7PYRH_SYNSC2, ., 7, ., 4, ., 2, 20.62230.69460.9789yesno
Q7U5F5PYRH_SYNPX2, ., 7, ., 4, ., 2, 20.63510.69460.9789yesno
Q1WUG5PYRH_LACS12, ., 7, ., 4, ., 2, 20.56770.70050.975yesno
Q3A397PYRH_PELCD2, ., 7, ., 4, ., 2, 20.58750.70950.9834yesno
Q7VD61PYRH_PROMA2, ., 7, ., 4, ., 2, 20.60770.69160.9746yesno
Q39W86PYRH_GEOMG2, ., 7, ., 4, ., 2, 20.58090.71250.9958yesno
Q5N3B6PYRH_SYNP62, ., 7, ., 4, ., 2, 20.63400.70050.975yesno
Q2JJE2PYRH_SYNJB2, ., 7, ., 4, ., 2, 20.64950.70050.9249yesno
Q0I8L5PYRH_SYNS32, ., 7, ., 4, ., 2, 20.65080.69160.9829yesno
Q044C8PYRH_LACGA2, ., 7, ., 4, ., 2, 20.56350.70050.9709yesno
Q8YXK5PYRH_NOSS12, ., 7, ., 4, ., 2, 20.63400.70050.9669yesno
Q3AB79PYRH_CARHZ2, ., 7, ., 4, ., 2, 20.60660.70950.9793yesno
Q7V2F8PYRH_PROMP2, ., 7, ., 4, ., 2, 20.60770.69160.9871yesno
A5GSA3PYRH_SYNR32, ., 7, ., 4, ., 2, 20.63790.69160.9746yesno
A3DE57PYRH_CLOTH2, ., 7, ., 4, ., 2, 20.59410.70050.9957yesno
Q3AV98PYRH_SYNS92, ., 7, ., 4, ., 2, 20.64520.69760.9831yesno
Q8XJQ8PYRH_CLOPE2, ., 7, ., 4, ., 2, 20.58360.68860.9704yesno
Q2JS42PYRH_SYNJA2, ., 7, ., 4, ., 2, 20.64830.70650.9291yesno
Q0SSC2PYRH_CLOPS2, ., 7, ., 4, ., 2, 20.58790.68860.9704yesno
A3PBP6PYRH_PROM02, ., 7, ., 4, ., 2, 20.59480.69160.9871yesno
Q7V6C2PYRH_PROMM2, ., 7, ., 4, ., 2, 20.64220.69160.9746yesno
A2BQ03PYRH_PROMS2, ., 7, ., 4, ., 2, 20.59910.69160.9871yesno
A2C7Q3PYRH_PROM32, ., 7, ., 4, ., 2, 20.63790.69160.9746yesno
Q6MGY5PYRH_BDEBA2, ., 7, ., 4, ., 2, 20.55640.70650.9957yesno
A8G3N7PYRH_PROM22, ., 7, ., 4, ., 2, 20.60340.69160.9871yesno
A4J5Z1PYRH_DESRM2, ., 7, ., 4, ., 2, 20.57140.70950.9793yesno
A0LJ65PYRH_SYNFM2, ., 7, ., 4, ., 2, 20.58150.70650.9632yesno
A7H724PYRH_ANADF2, ., 7, ., 4, ., 2, 20.60500.70350.9437yesno
Q3MFI4PYRH_ANAVT2, ., 7, ., 4, ., 2, 20.63400.70050.9669yesno
A5GJF0PYRH_SYNPW2, ., 7, ., 4, ., 2, 20.64220.69160.9829yesno
Q74BW2PYRH_GEOSL2, ., 7, ., 4, ., 2, 20.57260.71250.9958yesno
Q8R6G5PYRH_FUSNN2, ., 7, ., 4, ., 2, 20.55640.70650.9874yesno
Q46GQ4PYRH_PROMT2, ., 7, ., 4, ., 2, 20.61630.69160.9746yesno
Q8EQV1PYRH_OCEIH2, ., 7, ., 4, ., 2, 20.58050.70050.975yesno
Q2IMM2PYRH_ANADE2, ., 7, ., 4, ., 2, 20.61080.71250.9482yesno
Q31QY1PYRH_SYNE72, ., 7, ., 4, ., 2, 20.63400.70050.975yesno
A4XM00PYRH_CALS82, ., 7, ., 4, ., 2, 20.59830.69760.9748yesno
Q74IR8PYRH_LACJO2, ., 7, ., 4, ., 2, 20.57200.70050.9709yesno
O66929PYRH_AQUAE2, ., 7, ., 4, ., 2, 20.56840.70950.9875yesno
Q10Y48PYRH_TRIEI2, ., 7, ., 4, ., 2, 20.63860.70950.9713yesno
Q1D1I1PYRH_MYXXD2, ., 7, ., 4, ., 2, 20.57430.71850.96yesno
Q31C12PYRH_PROM92, ., 7, ., 4, ., 2, 20.60340.69160.9871yesno
Q7NI44PYRH_GLOVI2, ., 7, ., 4, ., 2, 20.58970.69460.9872yesno
A2C0Y1PYRH_PROM12, ., 7, ., 4, ., 2, 20.61630.69160.9746yesno
Q24UF9PYRH_DESHY2, ., 7, ., 4, ., 2, 20.58750.70950.9875yesno
Q0TPQ5PYRH_CLOP12, ., 7, ., 4, ., 2, 20.58360.68860.9704yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.40.921
4th Layer2.7.4.220.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
cd04254231 cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, t 1e-151
PRK00358231 PRK00358, pyrH, uridylate kinase; Provisional 1e-144
cd04239229 cd04239, AAK_UMPK-like, AAK_UMPK-like: UMP kinase 1e-131
COG0528238 COG0528, PyrH, Uridylate kinase [Nucleotide transp 1e-124
TIGR02075232 TIGR02075, pyrH_bact, uridylate kinase 1e-122
PRK14558231 PRK14558, pyrH, uridylate kinase; Provisional 2e-77
PRK14557247 PRK14557, pyrH, uridylate kinase; Provisional 2e-69
PRK14556249 PRK14556, pyrH, uridylate kinase; Provisional 2e-58
cd04253221 cd04253, AAK_UMPK-PyrH-Pf, AAK_UMPK-PyrH-Pf: UMP k 6e-37
TIGR02076221 TIGR02076, pyrH_arch, uridylate kinase, putative 1e-33
pfam00696230 pfam00696, AA_kinase, Amino acid kinase family 2e-31
cd02115248 cd02115, AAK, Amino Acid Kinases (AAK) superfamily 5e-30
COG0527 447 COG0527, LysC, Aspartokinases [Amino acid transpor 6e-13
cd04242251 cd04242, AAK_G5K_ProB, AAK_G5K_ProB: Glutamate-5-k 2e-12
COG1608252 COG1608, COG1608, Predicted archaeal kinase [Gener 2e-12
cd04255262 cd04255, AAK_UMPK-MosAB, AAK_UMPK-MosAB: This CD i 3e-12
cd04234227 cd04234, AAK_AK, AAK_AK: Amino Acid Kinase Superfa 7e-12
TIGR00657 441 TIGR00657, asp_kinases, aspartate kinase 7e-12
COG0263369 COG0263, ProB, Glutamate 5-kinase [Amino acid tran 3e-10
cd04241252 cd04241, AAK_FomA-like, AAK_FomA-like: This CD inc 5e-10
TIGR01027363 TIGR01027, proB, glutamate 5-kinase 9e-10
cd04246239 cd04246, AAK_AK-DapG-like, AAK_AK-DapG-like: Amino 2e-09
cd04260244 cd04260, AAK_AKi-DapG-BS, AAK_AKi-DapG-BS: Amino A 4e-09
PRK05429372 PRK05429, PRK05429, gamma-glutamyl kinase; Provisi 5e-09
PRK08210 403 PRK08210, PRK08210, aspartate kinase I; Reviewed 6e-09
cd04256284 cd04256, AAK_P5CS_ProBA, AAK_P5CS_ProBA: Glutamate 3e-08
PRK06291 465 PRK06291, PRK06291, aspartate kinase; Provisional 5e-08
cd04259295 cd04259, AAK_AK-DapDC, AAK_AK-DapDC: Amino Acid Ki 5e-08
cd04244298 cd04244, AAK_AK-LysC-like, AAK_AK-LysC-like: Amino 7e-08
cd04261239 cd04261, AAK_AKii-LysC-BS, AAK_AKii-LysC-BS: Amino 7e-08
PRK09436 819 PRK09436, thrA, bifunctional aspartokinase I/homos 8e-08
cd04243293 cd04243, AAK_AK-HSDH-like, AAK_AK-HSDH-like: Amino 1e-07
cd04257294 cd04257, AAK_AK-HSDH, AAK_AK-HSDH: Amino Acid Kina 2e-07
PRK08961 861 PRK08961, PRK08961, bifunctional aspartate kinase/ 2e-07
PRK13402368 PRK13402, PRK13402, gamma-glutamyl kinase; Provisi 3e-07
PRK12314266 PRK12314, PRK12314, gamma-glutamyl kinase; Provisi 5e-07
COG2054212 COG2054, COG2054, Uncharacterized archaeal kinase 9e-07
TIGR01092 715 TIGR01092, P5CS, delta l-pyrroline-5-carboxylate s 4e-06
PLN02418 718 PLN02418, PLN02418, delta-1-pyrroline-5-carboxylat 5e-06
TIGR00656 401 TIGR00656, asp_kin_monofn, aspartate kinase, monof 9e-06
PRK07431 587 PRK07431, PRK07431, aspartate kinase; Provisional 4e-05
PRK08373341 PRK08373, PRK08373, aspartate kinase; Validated 7e-05
PRK06635 404 PRK06635, PRK06635, aspartate kinase; Reviewed 7e-05
PRK08841 392 PRK08841, PRK08841, aspartate kinase; Validated 2e-04
cd04240203 cd04240, AAK_UC, AAK_UC: Uncharacterized (UC) amin 2e-04
cd04245288 cd04245, AAK_AKiii-YclM-BS, AAK_AKiii-YclM-BS: Ami 3e-04
cd04249252 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut 7e-04
TIGR02078327 TIGR02078, AspKin_pair, Pyrococcus aspartate kinas 0.002
PRK12354307 PRK12354, PRK12354, carbamate kinase; Reviewed 0.003
cd04258292 cd04258, AAK_AKiii-LysC-EC, AAK_AKiii-LysC-EC: Ami 0.004
>gnl|CDD|239787 cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) Back     alignment and domain information 
 Score =  424 bits (1093), Expect = e-151
 Identities = 159/232 (68%), Positives = 193/232 (83%), Gaps = 1/232 (0%)

Query: 91  QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGN 150
           +RVLLK+SGEALAG++   IDP++   IARE+  V  LG+EVAIVVGGGNIFRGASAA  
Sbjct: 1   KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEA 60

Query: 151 SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEK 210
            G+DR++ADY+GMLATV+NA+ LQ  +ES+G+ TRV +A  M  VAEPYIRRRA+RHLEK
Sbjct: 61  -GMDRATADYMGMLATVINALALQDALESLGVKTRVMSAIPMQGVAEPYIRRRAIRHLEK 119

Query: 211 GRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLT 270
           GRVVIFA GTGNPFFTTDTAAALR  EINA+V+LKAT VDGVYD +P++NPNA+  D LT
Sbjct: 120 GRVVIFAGGTGNPFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLT 179

Query: 271 YQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 322
           Y EV SK L VMD TA TLC++NN+P+VVFN+N+PGN+ KA++GE VGTLI 
Sbjct: 180 YDEVLSKGLKVMDATAFTLCRDNNLPIVVFNINEPGNLLKAVKGEGVGTLIS 231

The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 231
>gnl|CDD|234735 PRK00358, pyrH, uridylate kinase; Provisional Back     alignment and domain information
>gnl|CDD|239772 cd04239, AAK_UMPK-like, AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis Back     alignment and domain information
>gnl|CDD|223602 COG0528, PyrH, Uridylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|213681 TIGR02075, pyrH_bact, uridylate kinase Back     alignment and domain information
>gnl|CDD|173023 PRK14558, pyrH, uridylate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173022 PRK14557, pyrH, uridylate kinase; Provisional Back     alignment and domain information
>gnl|CDD|173021 PRK14556, pyrH, uridylate kinase; Provisional Back     alignment and domain information
>gnl|CDD|239786 cd04253, AAK_UMPK-PyrH-Pf, AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) Back     alignment and domain information
>gnl|CDD|233711 TIGR02076, pyrH_arch, uridylate kinase, putative Back     alignment and domain information
>gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family Back     alignment and domain information
>gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) Back     alignment and domain information
>gnl|CDD|223601 COG0527, LysC, Aspartokinases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|239775 cd04242, AAK_G5K_ProB, AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis Back     alignment and domain information
>gnl|CDD|224524 COG1608, COG1608, Predicted archaeal kinase [General function prediction only] Back     alignment and domain information
>gnl|CDD|239788 cd04255, AAK_UMPK-MosAB, AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis Back     alignment and domain information
>gnl|CDD|239767 cd04234, AAK_AK, AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) Back     alignment and domain information
>gnl|CDD|233076 TIGR00657, asp_kinases, aspartate kinase Back     alignment and domain information
>gnl|CDD|223341 COG0263, ProB, Glutamate 5-kinase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|239774 cd04241, AAK_FomA-like, AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms Back     alignment and domain information
>gnl|CDD|162163 TIGR01027, proB, glutamate 5-kinase Back     alignment and domain information
>gnl|CDD|239779 cd04246, AAK_AK-DapG-like, AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes Back     alignment and domain information
>gnl|CDD|239793 cd04260, AAK_AKi-DapG-BS, AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species Back     alignment and domain information
>gnl|CDD|235460 PRK05429, PRK05429, gamma-glutamyl kinase; Provisional Back     alignment and domain information
>gnl|CDD|236188 PRK08210, PRK08210, aspartate kinase I; Reviewed Back     alignment and domain information
>gnl|CDD|239789 cd04256, AAK_P5CS_ProBA, AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis Back     alignment and domain information
>gnl|CDD|235773 PRK06291, PRK06291, aspartate kinase; Provisional Back     alignment and domain information
>gnl|CDD|239792 cd04259, AAK_AK-DapDC, AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria Back     alignment and domain information
>gnl|CDD|239777 cd04244, AAK_AK-LysC-like, AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants Back     alignment and domain information
>gnl|CDD|239794 cd04261, AAK_AKii-LysC-BS, AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences Back     alignment and domain information
>gnl|CDD|181856 PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional Back     alignment and domain information
>gnl|CDD|239776 cd04243, AAK_AK-HSDH-like, AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) Back     alignment and domain information
>gnl|CDD|239790 cd04257, AAK_AK-HSDH, AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) Back     alignment and domain information
>gnl|CDD|236358 PRK08961, PRK08961, bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional Back     alignment and domain information
>gnl|CDD|184032 PRK13402, PRK13402, gamma-glutamyl kinase; Provisional Back     alignment and domain information
>gnl|CDD|183430 PRK12314, PRK12314, gamma-glutamyl kinase; Provisional Back     alignment and domain information
>gnl|CDD|224965 COG2054, COG2054, Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] Back     alignment and domain information
>gnl|CDD|130164 TIGR01092, P5CS, delta l-pyrroline-5-carboxylate synthetase Back     alignment and domain information
>gnl|CDD|215230 PLN02418, PLN02418, delta-1-pyrroline-5-carboxylate synthase Back     alignment and domain information
>gnl|CDD|233075 TIGR00656, asp_kin_monofn, aspartate kinase, monofunctional class Back     alignment and domain information
>gnl|CDD|236018 PRK07431, PRK07431, aspartate kinase; Provisional Back     alignment and domain information
>gnl|CDD|236250 PRK08373, PRK08373, aspartate kinase; Validated Back     alignment and domain information
>gnl|CDD|235843 PRK06635, PRK06635, aspartate kinase; Reviewed Back     alignment and domain information
>gnl|CDD|181563 PRK08841, PRK08841, aspartate kinase; Validated Back     alignment and domain information
>gnl|CDD|239773 cd04240, AAK_UC, AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria Back     alignment and domain information
>gnl|CDD|239778 cd04245, AAK_AKiii-YclM-BS, AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species Back     alignment and domain information
>gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis Back     alignment and domain information
>gnl|CDD|131133 TIGR02078, AspKin_pair, Pyrococcus aspartate kinase subunit, putative Back     alignment and domain information
>gnl|CDD|183466 PRK12354, PRK12354, carbamate kinase; Reviewed Back     alignment and domain information
>gnl|CDD|239791 cd04258, AAK_AKiii-LysC-EC, AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 334
PRK00358231 pyrH uridylate kinase; Provisional 100.0
COG0528238 PyrH Uridylate kinase [Nucleotide transport and me 100.0
PRK14556249 pyrH uridylate kinase; Provisional 100.0
PRK14558231 pyrH uridylate kinase; Provisional 100.0
TIGR02075233 pyrH_bact uridylate kinase. This protein, also cal 100.0
cd04239229 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik 100.0
cd04254231 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi 100.0
PRK14557247 pyrH uridylate kinase; Provisional 100.0
COG0263369 ProB Glutamate 5-kinase [Amino acid transport and 100.0
PRK12314266 gamma-glutamyl kinase; Provisional 100.0
cd04256284 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase 100.0
PRK13402368 gamma-glutamyl kinase; Provisional 100.0
PTZ00489264 glutamate 5-kinase; Provisional 100.0
PRK05429372 gamma-glutamyl kinase; Provisional 100.0
cd04253221 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP 100.0
TIGR01027363 proB glutamate 5-kinase. Bacterial ProB proteins h 100.0
cd04241252 AAK_FomA-like AAK_FomA-like: This CD includes a fo 100.0
cd04242251 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K 100.0
TIGR02076221 pyrH_arch uridylate kinase, putative. This family 100.0
cd02115248 AAK Amino Acid Kinases (AAK) superfamily, catalyti 100.0
cd04246239 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina 100.0
cd04261239 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina 100.0
cd04255262 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th 100.0
COG1608252 Predicted archaeal kinase [General function predic 100.0
cd04234227 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) 100.0
PRK08841 392 aspartate kinase; Validated 100.0
COG0527 447 LysC Aspartokinases [Amino acid transport and meta 100.0
KOG1154285 consensus Gamma-glutamyl kinase [Amino acid transp 100.0
TIGR00656 401 asp_kin_monofn aspartate kinase, monofunctional cl 100.0
COG0548265 ArgB Acetylglutamate kinase [Amino acid transport 99.98
TIGR01092 715 P5CS delta l-pyrroline-5-carboxylate synthetase. T 99.98
cd04260244 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase 99.98
PRK14058268 acetylglutamate/acetylaminoadipate kinase; Provisi 99.98
PRK06635 404 aspartate kinase; Reviewed 99.98
cd04244298 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina 99.97
PRK08210 403 aspartate kinase I; Reviewed 99.97
PRK07431 587 aspartate kinase; Provisional 99.97
PLN02512309 acetylglutamate kinase 99.97
CHL00202284 argB acetylglutamate kinase; Provisional 99.97
PRK12353314 putative amino acid kinase; Reviewed 99.97
PRK00942283 acetylglutamate kinase; Provisional 99.97
cd04250279 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase 99.97
cd04259295 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super 99.97
PLN02418 718 delta-1-pyrroline-5-carboxylate synthase 99.97
cd04245288 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki 99.97
cd04235308 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot 99.97
TIGR00657 441 asp_kinases aspartate kinase. The Lys-sensitive en 99.97
cd04238256 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate 99.97
PRK06291 465 aspartate kinase; Provisional 99.97
cd04257294 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa 99.97
TIGR00746310 arcC carbamate kinase. The seed alignment for this 99.96
cd04243293 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina 99.96
cd04258292 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki 99.96
cd04251257 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina 99.96
PRK08373341 aspartate kinase; Validated 99.96
cd04249252 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina 99.96
cd04247306 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa 99.96
PRK09084 448 aspartate kinase III; Validated 99.96
PRK05925 440 aspartate kinase; Provisional 99.96
cd04240203 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin 99.96
PRK12454313 carbamate kinase-like carbamoyl phosphate syntheta 99.96
PRK09034 454 aspartate kinase; Reviewed 99.95
PF00696242 AA_kinase: Amino acid kinase family Match to Gluta 99.95
PLN02551 521 aspartokinase 99.95
PRK12352316 putative carbamate kinase; Reviewed 99.95
TIGR01890 429 N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi 99.95
TIGR02078327 AspKin_pair Pyrococcus aspartate kinase subunit, p 99.95
cd04237280 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) 99.95
PRK12686312 carbamate kinase; Reviewed 99.95
PRK09466 810 metL bifunctional aspartate kinase II/homoserine d 99.95
cd04236271 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA 99.94
TIGR00761231 argB acetylglutamate kinase. This model describes 99.94
PRK05279 441 N-acetylglutamate synthase; Validated 99.94
PRK08961 861 bifunctional aspartate kinase/diaminopimelate deca 99.94
cd04252248 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam 99.94
PRK09436 819 thrA bifunctional aspartokinase I/homoserine dehyd 99.93
PRK12354307 carbamate kinase; Reviewed 99.93
PRK09411297 carbamate kinase; Reviewed 99.91
PRK04531 398 acetylglutamate kinase; Provisional 99.9
PLN02825 515 amino-acid N-acetyltransferase 99.9
KOG0456 559 consensus Aspartate kinase [Amino acid transport a 99.89
PRK09181 475 aspartate kinase; Validated 99.88
COG0549312 ArcC Carbamate kinase [Amino acid transport and me 99.86
cd04248304 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S 99.86
COG2054212 Uncharacterized archaeal kinase related to asparto 99.84
KOG2436 520 consensus Acetylglutamate kinase/acetylglutamate s 98.59
>PRK00358 pyrH uridylate kinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-42  Score=320.55  Aligned_cols=231  Identities=64%  Similarity=1.032  Sum_probs=202.5

Q ss_pred             CeEEEEeCCccccCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCchHHHHHHHcccCCCCCChHHHHHHHHHHHHH
Q 019877           91 QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNA  170 (334)
Q Consensus        91 k~iVIKlGGS~lt~~~~~~l~~~~l~~ia~~Ia~l~~~G~~vVlVhGgG~~~~g~~~~~~~gl~~~~~d~~~~la~~~n~  170 (334)
                      +++||||||++|+++++++++.+.+++++++|+++++.|+++|||||||++++++... ..+++....+.++++++++|+
T Consensus         1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~-~~~~~~~~~~~~~~~~~~l~~   79 (231)
T PRK00358          1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGNIFRGYIGA-AAGMDRATADYMGMLATVMNA   79 (231)
T ss_pred             CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHh-hcCCChhhHHHHHHHHHHHHH
Confidence            4799999999999765567899999999999999999999999999999998876432 245555566788999999999


Q ss_pred             HHHHHHHHHcCCCeeEEeceeccccchhHHHHHHHHHHhCCCEEEEeCCCCCcccChHHHHHHHHHHcCCcEEEEeecCC
Q 019877          171 IFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVD  250 (334)
Q Consensus       171 ~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~i~~lL~~G~IPVi~g~~g~~~~~sD~lAa~lA~~l~Ad~LiilTDVd  250 (334)
                      .+++.+|.++|+++..+++........++..+.+.++|++|.|||++++.+.+++++|++|+++|.+++||+|+++||||
T Consensus        80 ~ll~~~l~~~Gi~a~~~~~~~~~~~~~~~~~~~~~~~l~~g~vPVv~g~~~~~~~ssD~~A~~lA~~l~A~~li~~tdVd  159 (231)
T PRK00358         80 LALQDALERAGVDTRVQSAIPMPQVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRAEEIGADVLLKATNVD  159 (231)
T ss_pred             HHHHHHHHHcCCCeEEechhhcccccCcccHHHHHHHHHCCCEEEEECCCCCCCCCchHHHHHHHHHcCCCEEEEeeCcC
Confidence            88888899999999866665443333344456677899999999999887888899999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcccccccHHHHhhCCCCcchHHHHHHHHhCCCcEEEEcCCChhHHHHHHcCCCCceEEe
Q 019877          251 GVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG  322 (334)
Q Consensus       251 GVyt~dP~~~p~aklI~~Is~~e~~~~g~~v~k~~Aa~~a~~~Gi~V~I~ng~~~~~l~~~l~g~~~GT~I~  322 (334)
                      |||++||+.+|+|++|++|+++|+.+.|.+.+|+++++.|.+.|++++|+|+.+|++|.++++|+.+||+|.
T Consensus       160 GVy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i~  231 (231)
T PRK00358        160 GVYDADPKKDPDAKKYDRLTYDEVLEKGLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVKGEHIGTLVS  231 (231)
T ss_pred             ceEcCCCCCCCCCEEeeEecHHHHHHcCCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHCCCCCCEEeC
Confidence            999999999999999999999998777778899999999999999999999999999999999999999984

>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK14556 pyrH uridylate kinase; Provisional Back     alignment and domain information
>PRK14558 pyrH uridylate kinase; Provisional Back     alignment and domain information
>TIGR02075 pyrH_bact uridylate kinase Back     alignment and domain information
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis Back     alignment and domain information
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) Back     alignment and domain information
>PRK14557 pyrH uridylate kinase; Provisional Back     alignment and domain information
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12314 gamma-glutamyl kinase; Provisional Back     alignment and domain information
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis Back     alignment and domain information
>PRK13402 gamma-glutamyl kinase; Provisional Back     alignment and domain information
>PTZ00489 glutamate 5-kinase; Provisional Back     alignment and domain information
>PRK05429 gamma-glutamyl kinase; Provisional Back     alignment and domain information
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) Back     alignment and domain information
>TIGR01027 proB glutamate 5-kinase Back     alignment and domain information
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms Back     alignment and domain information
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis Back     alignment and domain information
>TIGR02076 pyrH_arch uridylate kinase, putative Back     alignment and domain information
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) Back     alignment and domain information
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes Back     alignment and domain information
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences Back     alignment and domain information
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis Back     alignment and domain information
>COG1608 Predicted archaeal kinase [General function prediction only] Back     alignment and domain information
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) Back     alignment and domain information
>PRK08841 aspartate kinase; Validated Back     alignment and domain information
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class Back     alignment and domain information
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase Back     alignment and domain information
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species Back     alignment and domain information
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional Back     alignment and domain information
>PRK06635 aspartate kinase; Reviewed Back     alignment and domain information
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants Back     alignment and domain information
>PRK08210 aspartate kinase I; Reviewed Back     alignment and domain information
>PRK07431 aspartate kinase; Provisional Back     alignment and domain information
>PLN02512 acetylglutamate kinase Back     alignment and domain information
>CHL00202 argB acetylglutamate kinase; Provisional Back     alignment and domain information
>PRK12353 putative amino acid kinase; Reviewed Back     alignment and domain information
>PRK00942 acetylglutamate kinase; Provisional Back     alignment and domain information
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis Back     alignment and domain information
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria Back     alignment and domain information
>PLN02418 delta-1-pyrroline-5-carboxylate synthase Back     alignment and domain information
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species Back     alignment and domain information
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP Back     alignment and domain information
>TIGR00657 asp_kinases aspartate kinase Back     alignment and domain information
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like Back     alignment and domain information
>PRK06291 aspartate kinase; Provisional Back     alignment and domain information
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) Back     alignment and domain information
>TIGR00746 arcC carbamate kinase Back     alignment and domain information
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) Back     alignment and domain information
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII Back     alignment and domain information
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) Back     alignment and domain information
>PRK08373 aspartate kinase; Validated Back     alignment and domain information
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis Back     alignment and domain information
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains Back     alignment and domain information
>PRK09084 aspartate kinase III; Validated Back     alignment and domain information
>PRK05925 aspartate kinase; Provisional Back     alignment and domain information
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria Back     alignment and domain information
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed Back     alignment and domain information
>PRK09034 aspartate kinase; Reviewed Back     alignment and domain information
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families Back     alignment and domain information
>PLN02551 aspartokinase Back     alignment and domain information
>PRK12352 putative carbamate kinase; Reviewed Back     alignment and domain information
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase Back     alignment and domain information
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative Back     alignment and domain information
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts Back     alignment and domain information
>PRK12686 carbamate kinase; Reviewed Back     alignment and domain information
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional Back     alignment and domain information
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals Back     alignment and domain information
>TIGR00761 argB acetylglutamate kinase Back     alignment and domain information
>PRK05279 N-acetylglutamate synthase; Validated Back     alignment and domain information
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional Back     alignment and domain information
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) Back     alignment and domain information
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional Back     alignment and domain information
>PRK12354 carbamate kinase; Reviewed Back     alignment and domain information
>PRK09411 carbamate kinase; Reviewed Back     alignment and domain information
>PRK04531 acetylglutamate kinase; Provisional Back     alignment and domain information
>PLN02825 amino-acid N-acetyltransferase Back     alignment and domain information
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09181 aspartate kinase; Validated Back     alignment and domain information
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] Back     alignment and domain information
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria Back     alignment and domain information
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] Back     alignment and domain information
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
3ek5_A243 Unique Gtp-Binding Pocket And Allostery Of Ump Kina 9e-71
3nwy_A281 Structure And Allosteric Regulation Of The Uridine 6e-68
1z9d_A252 Crystal Structure Of A Putative Uridylate Kinase (U 8e-64
2a1f_A247 Crystal Structure Of Uridylate Kinase Length = 247 4e-60
4a7w_A240 Crystal Structure Of Uridylate Kinase From Helicoba 4e-60
2bnd_A241 The Structure Of E.Coli Ump Kinase In Complex With 4e-58
2bne_A241 The Structure Of E. Coli Ump Kinase In Complex With 4e-58
1ybd_A239 Crystal Structure Analysis Of Uridylate Kinase From 2e-56
2bnf_A241 The Structure Of E. Coli Ump Kinase In Complex With 3e-53
2jjx_A255 The Crystal Structure Of Ump Kinase From Bacillus A 1e-49
2va1_A256 Crystal Structure Of Ump Kinase From Ureaplasma Par 1e-42
2ij9_A219 Crystal Structure Of Uridylate Kinase From Archaeog 3e-16
2brx_A244 Ump Kinase From Pyrococcus Furiosus Without Ligands 2e-12
2ji5_A227 Structure Of Ump Kinase From Pyrococcus Furiosus Co 2e-12
2j4j_A226 Crystal Structure Of Uridylate Kinase From Sulfolob 2e-11
2bri_A225 Ump Kinase From Pyrococcus Furiosus Complexed With 4e-08
2bmu_A226 Ump Kinase From Pyrococcus Furiosus Complexed With 4e-08
3ll9_A269 X-Ray Structures Of Isopentenyl Phosphate Kinase Le 3e-07
4f6t_B268 The Crystal Structure Of The Molybdenum Storage Pro 4e-06
2ogx_B270 The Crystal Structure Of The Molybdenum Storage Pro 9e-06
3c1n_C 473 Crystal Structure Of Allosteric Inhibition Threonin 2e-04
2hmf_A 469 Structure Of A Threonine Sensitive Aspartokinase Fr 3e-04
>pdb|3EK5|A Chain A, Unique Gtp-Binding Pocket And Allostery Of Ump Kinase From A Gram- Negative Phytopathogen Bacterium Length = 243 Back     alignment and structure 
Iteration: 1

 Score =  263 bits (672), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 124/243 (51%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
Query: 81  NGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGN 140
           N MS+ SY+  R+LLK+SGEAL GD    IDPK+   +A EV    + G +VA+V+GGGN
Sbjct: 2   NAMSELSYR--RILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGN 59
Query: 141 IFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYI 200
           IFRGA  A  SG+DR + D++GMLATV+NA+ +Q  +E +G   RV +A ++++V E +I
Sbjct: 60  IFRGAGLAA-SGMDRVTGDHMGMLATVINALAMQDALEKLGAKVRVMSAIKINDVCEDFI 118
Query: 201 RRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRN 260
           RRRA+RHLEKGR+ IFAAGTGNPFFTTD+ AALR  EI A+++LKAT VDGVYD +P+++
Sbjct: 119 RRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKH 178
Query: 261 PNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTL 320
            +A   D+LTY EV  + L VMD  A  L +++++P+ +F +++PG + + + G ++GTL
Sbjct: 179 SDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTL 238
Query: 321 IGG 323
           + G
Sbjct: 239 VQG 241
>pdb|3NWY|A Chain A, Structure And Allosteric Regulation Of The Uridine Monophosphate Kinase From Mycobacterium Tuberculosis Length = 281 Back     alignment and structure
>pdb|1Z9D|A Chain A, Crystal Structure Of A Putative Uridylate Kinase (Ump-Kinase) From Streptococcus Pyogenes Length = 252 Back     alignment and structure
>pdb|2A1F|A Chain A, Crystal Structure Of Uridylate Kinase Length = 247 Back     alignment and structure
>pdb|4A7W|A Chain A, Crystal Structure Of Uridylate Kinase From Helicobacter Pylori Length = 240 Back     alignment and structure
>pdb|2BND|A Chain A, The Structure Of E.Coli Ump Kinase In Complex With Udp Length = 241 Back     alignment and structure
>pdb|2BNE|A Chain A, The Structure Of E. Coli Ump Kinase In Complex With Ump Length = 241 Back     alignment and structure
>pdb|1YBD|A Chain A, Crystal Structure Analysis Of Uridylate Kinase From Neisseria Meningitidis Length = 239 Back     alignment and structure
>pdb|2BNF|A Chain A, The Structure Of E. Coli Ump Kinase In Complex With Utp Length = 241 Back     alignment and structure
>pdb|2JJX|A Chain A, The Crystal Structure Of Ump Kinase From Bacillus Anthracis (Ba1797) Length = 255 Back     alignment and structure
>pdb|2VA1|A Chain A, Crystal Structure Of Ump Kinase From Ureaplasma Parvum Length = 256 Back     alignment and structure
>pdb|2IJ9|A Chain A, Crystal Structure Of Uridylate Kinase From Archaeoglobus Fulgidus Length = 219 Back     alignment and structure
>pdb|2BRX|A Chain A, Ump Kinase From Pyrococcus Furiosus Without Ligands Length = 244 Back     alignment and structure
>pdb|2JI5|A Chain A, Structure Of Ump Kinase From Pyrococcus Furiosus Complexed With Utp Length = 227 Back     alignment and structure
>pdb|2J4J|A Chain A, Crystal Structure Of Uridylate Kinase From Sulfolobus Solfataricus In Complex With Ump And Amppcp To 2.1 Angstrom Resolution Length = 226 Back     alignment and structure
>pdb|2BRI|A Chain A, Ump Kinase From Pyrococcus Furiosus Complexed With Its Substrate Analog Amppnp Length = 225 Back     alignment and structure
>pdb|2BMU|A Chain A, Ump Kinase From Pyrococcus Furiosus Complexed With Its Substrate Ump And Its Substrate Analog Amppnp Length = 226 Back     alignment and structure
>pdb|3LL9|A Chain A, X-Ray Structures Of Isopentenyl Phosphate Kinase Length = 269 Back     alignment and structure
>pdb|4F6T|B Chain B, The Crystal Structure Of The Molybdenum Storage Protein (Mosto) From Azotobacter Vinelandii Loaded With Various Polyoxometalates Length = 268 Back     alignment and structure
>pdb|2OGX|B Chain B, The Crystal Structure Of The Molybdenum Storage Protein From Azotobacter Vinelandii Loaded With Polyoxotungstates (Wsto) Length = 270 Back     alignment and structure
>pdb|3C1N|C Chain C, Crystal Structure Of Allosteric Inhibition Threonine-Sensitive Aspartokinase From Methanococcus Jannaschii With L-Threonine Length = 473 Back     alignment and structure
>pdb|2HMF|A Chain A, Structure Of A Threonine Sensitive Aspartokinase From Methanococcus Jannaschii Complexed With Mg-Adp And Aspartate Length = 469 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
4a7w_A240 Uridylate kinase; transferase; HET: GTP; 1.80A {He 1e-111
3ek6_A243 Uridylate kinase; UMPK unique GTP B site, alloster 1e-110
2a1f_A247 Uridylate kinase; PYRH, structural genomics, PSI, 1e-110
2ogx_B270 Molybdenum storage protein subunit beta; open alph 1e-107
1ybd_A239 Uridylate kinase; alpha/beta/alpha fold, hexamer, 1e-106
2brx_A244 Uridylate kinase; UMP kinase, amino acid kinase, p 1e-105
2va1_A256 Uridylate kinase; UMPK, transferase, pyrimidine bi 1e-105
1z9d_A252 Uridylate kinase, UK, UMP kinase; structural genom 1e-104
3nwy_A281 Uridylate kinase; allosterically activated form, A 1e-104
2jjx_A255 Uridylate kinase, UMP kinase; structural genomics, 1e-103
2j4j_A226 Uridylate kinase; transferase, nucleoside monophos 1e-103
2ij9_A219 Uridylate kinase; structural genomics, protein str 4e-97
2ogx_A276 Molybdenum storage protein subunit alpha; open alp 4e-76
3k4o_A266 Isopentenyl phosphate kinase; small molecule kinas 9e-51
3ll5_A249 Gamma-glutamyl kinase related protein; alternate m 1e-17
3d40_A286 FOMA protein; fosfomycin, antibiotic resistance, k 2e-17
3ll9_A269 Isopentenyl phosphate kinase; mevalonate biosynthe 2e-16
3c1m_A 473 Probable aspartokinase; allosteric inhibition, thr 4e-13
3tvi_A 446 Aspartokinase; structural genomics, ACT domains, r 7e-11
2j0w_A 449 Lysine-sensitive aspartokinase 3; feedback inhibit 1e-10
2j5v_A367 Glutamate 5-kinase; proline biosynthesis, gamma gl 4e-10
2cdq_A 510 Aspartokinase; aspartate kinase, amino acid metabo 3e-09
2ako_A251 Glutamate 5-kinase; structural genomics, PSI, prot 2e-08
3ab4_A 421 Aspartokinase; aspartate kinase, concerted inhibit 7e-07
3l76_A 600 Aspartokinase; allostery, ACT domains, kinase tran 1e-06
1e19_A314 Carbamate kinase-like carbamoylphosphate synthetas 1e-05
3d2m_A 456 Putative acetylglutamate synthase; protein-COA-Glu 3e-05
3kzf_A317 Carbamate kinase; arginine dihydrolase pathway, gi 4e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
2we5_A310 Carbamate kinase 1; arginine catabolism, arginine 3e-04
2e9y_A316 Carbamate kinase; transferase, structural genomics 4e-04
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* Length = 240 Back     alignment and structure
 Score =  321 bits (825), Expect = e-111
 Identities = 123/240 (51%), Positives = 172/240 (71%), Gaps = 3/240 (1%)

Query: 83  MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
            +K   K  RVL+K SGEALAGD+   ID  +   IA+E+ S+    IEV IV+GGGNI 
Sbjct: 2   QAKIKNK--RVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNII 59

Query: 143 RGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRR 202
           RG SAA    + R+S DY+GMLATV+NA+ +Q  +E IG+ TRVQ+A  + E+ E YI R
Sbjct: 60  RGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYR 119

Query: 203 RAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPN 262
           +A+RHLEKGRVVIF AGTGNPFFTTDTAA LR  EI +++++KAT VDG+YD +P +  +
Sbjct: 120 KAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKD 179

Query: 263 ARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGER-VGTLI 321
           A+ LDTL+Y +    D+ VMD TAI+L ++N +P+VV N+ + GN+ + I+ ++ V +++
Sbjct: 180 AKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMV 239
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} PDB: 3ek5_A Length = 243 Back     alignment and structure
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* Length = 247 Back     alignment and structure
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Length = 270 Back     alignment and structure
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 Length = 239 Back     alignment and structure
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* Length = 244 Back     alignment and structure
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} Length = 256 Back     alignment and structure
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 Length = 252 Back     alignment and structure
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} Length = 281 Back     alignment and structure
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} Length = 255 Back     alignment and structure
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* Length = 226 Back     alignment and structure
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 Length = 219 Back     alignment and structure
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Length = 276 Back     alignment and structure
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* Length = 266 Back     alignment and structure
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* Length = 249 Back     alignment and structure
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* Length = 286 Back     alignment and structure
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 269 Back     alignment and structure
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} Length = 446 Back     alignment and structure
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* Length = 449 Back     alignment and structure
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A Length = 367 Back     alignment and structure
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 Length = 510 Back     alignment and structure
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 Length = 251 Back     alignment and structure
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A Length = 421 Back     alignment and structure
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} Length = 600 Back     alignment and structure
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 Length = 314 Back     alignment and structure
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 Back     alignment and structure
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} Length = 317 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Length = 310 Back     alignment and structure
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} Length = 316 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
3ek6_A243 Uridylate kinase; UMPK unique GTP B site, alloster 100.0
3nwy_A281 Uridylate kinase; allosterically activated form, A 100.0
1ybd_A239 Uridylate kinase; alpha/beta/alpha fold, hexamer, 100.0
4a7w_A240 Uridylate kinase; transferase; HET: GTP; 1.80A {He 100.0
2a1f_A247 Uridylate kinase; PYRH, structural genomics, PSI, 100.0
1z9d_A252 Uridylate kinase, UK, UMP kinase; structural genom 100.0
2va1_A256 Uridylate kinase; UMPK, transferase, pyrimidine bi 100.0
2jjx_A255 Uridylate kinase, UMP kinase; structural genomics, 100.0
2j4j_A226 Uridylate kinase; transferase, nucleoside monophos 100.0
2brx_A244 Uridylate kinase; UMP kinase, amino acid kinase, p 100.0
2ij9_A219 Uridylate kinase; structural genomics, protein str 100.0
2j5v_A367 Glutamate 5-kinase; proline biosynthesis, gamma gl 100.0
3ll9_A269 Isopentenyl phosphate kinase; mevalonate biosynthe 100.0
3ll5_A249 Gamma-glutamyl kinase related protein; alternate m 100.0
2ako_A251 Glutamate 5-kinase; structural genomics, PSI, prot 100.0
2ogx_A276 Molybdenum storage protein subunit alpha; open alp 100.0
2ap9_A299 NAG kinase, acetylglutamate kinase, AGK; structura 100.0
2rd5_A298 Acetylglutamate kinase-like protein; protein-prote 100.0
2v5h_A321 Acetylglutamate kinase; amino-acid biosynthesis, t 100.0
3k4o_A266 Isopentenyl phosphate kinase; small molecule kinas 100.0
2ogx_B270 Molybdenum storage protein subunit beta; open alph 100.0
3d40_A286 FOMA protein; fosfomycin, antibiotic resistance, k 100.0
2bty_A282 Acetylglutamate kinase; N-acetyl-L-glutamate kinas 100.0
2buf_A300 Acetylglutamate kinase; acetyglutamate kinase, ADP 100.0
2egx_A269 Putative acetylglutamate kinase; struc genomics, N 100.0
3ab4_A 421 Aspartokinase; aspartate kinase, concerted inhibit 100.0
3l76_A 600 Aspartokinase; allostery, ACT domains, kinase tran 100.0
2we5_A310 Carbamate kinase 1; arginine catabolism, arginine 100.0
1gs5_A258 Acetylglutamate kinase; carbamate kinase, amino ac 100.0
2e9y_A316 Carbamate kinase; transferase, structural genomics 99.97
1e19_A314 Carbamate kinase-like carbamoylphosphate synthetas 99.97
3d2m_A 456 Putative acetylglutamate synthase; protein-COA-Glu 99.97
3l86_A279 Acetylglutamate kinase; ARGB, amino-acid biosynthe 99.97
3zzh_A307 Acetylglutamate kinase; transferase, arginine bios 99.97
4axs_A332 Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm 99.96
2cdq_A 510 Aspartokinase; aspartate kinase, amino acid metabo 99.96
3c1m_A 473 Probable aspartokinase; allosteric inhibition, thr 99.96
2j0w_A 449 Lysine-sensitive aspartokinase 3; feedback inhibit 99.96
4ab7_A 464 Protein Arg5,6, mitochondrial; transferase, argini 99.96
3tvi_A 446 Aspartokinase; structural genomics, ACT domains, r 99.96
3s6g_A 460 N-acetylglutamate kinase / N-acetylglutamate SYNT; 99.96
3kzf_A317 Carbamate kinase; arginine dihydrolase pathway, gi 99.96
3s6k_A 467 Acetylglutamate kinase; synthase, transferase; 2.8 99.94
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A Back     alignment and structure
Probab=100.00  E-value=5.3e-46  Score=344.09  Aligned_cols=234  Identities=50%  Similarity=0.891  Sum_probs=209.7

Q ss_pred             CCCeEEEEeCCccccCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCchHHHHHHHcccCCCCCChHHHHHHHHHHH
Q 019877           89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM  168 (334)
Q Consensus        89 ~~k~iVIKlGGS~lt~~~~~~l~~~~l~~ia~~Ia~l~~~G~~vVlVhGgG~~~~g~~~~~~~gl~~~~~d~~~~la~~~  168 (334)
                      +++++|||+||++|++++++.++.+.+++++++|+.+++.|+++|||||||+++++. .+...+++....|+++++++++
T Consensus         8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~-~~~~~g~~~~~~d~~g~l~t~~   86 (243)
T 3ek6_A            8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGA-GLAASGMDRVTGDHMGMLATVI   86 (243)
T ss_dssp             SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCST-TTSCSSSCHHHHHHHHHHHHHH
T ss_pred             cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHH-HHHHcCCCCCCHHHHHHHHHHH
Confidence            689999999999999876668999999999999999999999999999999976543 2234467666678889999999


Q ss_pred             HHHHHHHHHHHcCCCeeEEeceeccccchhHHHHHHHHHHhCCCEEEEeCCCCCcccChHHHHHHHHHHcCCcEEEEeec
Q 019877          169 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN  248 (334)
Q Consensus       169 n~~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~i~~lL~~G~IPVi~g~~g~~~~~sD~lAa~lA~~l~Ad~LiilTD  248 (334)
                      |+.++..+|++.|++++.+++++...+.+++..+.+.++|++|.|||++|++|.+++++|++|+++|.+++||+|+++||
T Consensus        87 N~~~l~~al~~~G~~a~~~~~~~~~~v~~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTd  166 (243)
T 3ek6_A           87 NALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLKATK  166 (243)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSEEEEECS
T ss_pred             HHHHHHHHHHHcCCCeEEechhhcCcccCcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHHHcCCCEEEEEeC
Confidence            99978888999999999999887654444444456788999999999999989999999999999999999999999999


Q ss_pred             CCccccCCCCCCCCCcccccccHHHHhhCCCCcchHHHHHHHHhCCCcEEEEcCCChhHHHHHHcCCCCceEEec
Q 019877          249 VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG  323 (334)
Q Consensus       249 VdGVyt~dP~~~p~aklI~~Is~~e~~~~g~~v~k~~Aa~~a~~~Gi~V~I~ng~~~~~l~~~l~g~~~GT~I~~  323 (334)
                      |||||++||+.+|++++|+++++.|+.+.+.+++|++|+..|.++|++++|+|+++|+.|.++|+|+.+||+|.+
T Consensus       167 VdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~~~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~  241 (243)
T 3ek6_A          167 VDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQG  241 (243)
T ss_dssp             SSSCBSSCGGGCTTCCBCSEECHHHHHHHTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEECC
T ss_pred             CCccCCCCCCCCCCceecccccHHHHHhCCchhHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCceEEee
Confidence            999999999999999999999999987767788999999999999999999999999999999999999999986
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} Back     alignment and structure
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 Back     alignment and structure
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* Back     alignment and structure
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* Back     alignment and structure
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 Back     alignment and structure
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} Back     alignment and structure
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} Back     alignment and structure
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* Back     alignment and structure
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* Back     alignment and structure
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 Back     alignment and structure
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A Back     alignment and structure
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* Back     alignment and structure
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 Back     alignment and structure
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Back     alignment and structure
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Back     alignment and structure
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Back     alignment and structure
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Back     alignment and structure
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* Back     alignment and structure
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Back     alignment and structure
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* Back     alignment and structure
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Back     alignment and structure
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Back     alignment and structure
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A Back     alignment and structure
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} Back     alignment and structure
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Back     alignment and structure
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Back     alignment and structure
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} Back     alignment and structure
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 Back     alignment and structure
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Back     alignment and structure
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Back     alignment and structure
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Back     alignment and structure
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} Back     alignment and structure
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 Back     alignment and structure
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* Back     alignment and structure
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Back     alignment and structure
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} Back     alignment and structure
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Back     alignment and structure
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} Back     alignment and structure
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 334
d2a1fa1236 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophi 1e-59
d1ybda1236 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseri 2e-54
d1z9da1238 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptoc 2e-51
d2ij9a1219 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeog 9e-47
d2brxa1225 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococc 2e-37
d2cdqa1304 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Ar 3e-18
d2hmfa1302 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus ja 1e-16
d2j0wa1292 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli 7e-16
d2akoa1250 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobact 3e-15
d2btya1282 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th 5e-05
d2ap9a1291 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My 0.003
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} Length = 236 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Uridylate kinase PyrH
species: Haemophilus influenzae [TaxId: 727]

 Score =  189 bits (480), Expect = 1e-59
 Identities = 109/238 (45%), Positives = 165/238 (69%), Gaps = 3/238 (1%)

Query: 84  SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
           S+P YK  R+LLK+SGEAL G+    IDP I   +A E+  +  +G+EV++V+GGGN+FR
Sbjct: 1   SQPIYK--RILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFR 58

Query: 144 GASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRR 203
           GA     +G++R   D++GMLATVMN + ++ ++    +  ++ +AF+++ + + Y    
Sbjct: 59  GAKL-AKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSE 117

Query: 204 AVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNA 263
           A++ L + RVVIF+AGTGNPFFTTD+ A LR  EI A+VVLKAT VDGVYD +P +NP+A
Sbjct: 118 AIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDA 177

Query: 264 RLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLI 321
           +L   L+Y EV  K+L VMD++A TL +++ +P+ VFN+ +PG + + + G   GT I
Sbjct: 178 KLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTI 235
>d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} Length = 236 Back     information, alignment and structure
>d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} Length = 238 Back     information, alignment and structure
>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} Length = 219 Back     information, alignment and structure
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} Length = 225 Back     information, alignment and structure
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 304 Back     information, alignment and structure
>d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} Length = 302 Back     information, alignment and structure
>d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} Length = 292 Back     information, alignment and structure
>d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} Length = 250 Back     information, alignment and structure
>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 Back     information, alignment and structure
>d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
d2a1fa1236 Uridylate kinase PyrH {Haemophilus influenzae [Tax 100.0
d1ybda1236 Uridylate kinase PyrH {Neisseria meningitidis [Tax 100.0
d2brxa1225 Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 100.0
d2ij9a1219 Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax 100.0
d1z9da1238 Uridylate kinase PyrH {Streptococcus pyogenes [Tax 100.0
d2akoa1250 Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 100.0
d2bufa1300 N-acetyl-l-glutamate kinase {Pseudomonas aeruginos 99.98
d2j0wa1292 Aspartokinase {Escherichia coli [TaxId: 562]} 99.97
d2btya1282 N-acetyl-l-glutamate kinase {Thermotoga maritima [ 99.97
d2ap9a1291 N-acetyl-l-glutamate kinase {Mycobacterium tubercu 99.97
d2cdqa1304 Aspartokinase {Thale cress (Arabidopsis thaliana) 99.97
d2hmfa1302 Aspartokinase {Methanococcus jannaschii [TaxId: 21 99.97
d1e19a_313 Carbamate kinase {Archaeon Pyrococcus furiosus [Ta 99.97
d1b7ba_307 Carbamate kinase {Enterococcus faecium [TaxId: 135 99.95
d1gs5a_258 N-acetyl-l-glutamate kinase {Escherichia coli [Tax 99.92
d1xvia_ 232 Putative mannosyl-3-phosphoglycerate phosphatase M 83.09
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Carbamate kinase-like
superfamily: Carbamate kinase-like
family: PyrH-like
domain: Uridylate kinase PyrH
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=7.7e-39  Score=290.01  Aligned_cols=233  Identities=44%  Similarity=0.789  Sum_probs=175.1

Q ss_pred             CCCeEEEEeCCccccCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCchHHHHHHHcccCCCCCChHHHHHHHHHHH
Q 019877           89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM  168 (334)
Q Consensus        89 ~~k~iVIKlGGS~lt~~~~~~l~~~~l~~ia~~Ia~l~~~G~~vVlVhGgG~~~~g~~~~~~~gl~~~~~d~~~~la~~~  168 (334)
                      ++|||||||||++|++++...++.+++++++++|+++++.|+++++|+||+..+ +...+...+......+.....+...
T Consensus         4 ~~kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~   82 (236)
T d2a1fa1           4 IYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLF-RGAKLAKAGMNRVVGDHMGMLATVM   82 (236)
T ss_dssp             SCSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTC-CCHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecccccc-hhhhhhhcCCCchhhHHHHHHHHHH
Confidence            789999999999999877667999999999999999999999999999874322 2222222222222222233334444


Q ss_pred             HHHHHHHHHHHcCCCeeEEeceeccccchhHHHHHHHHHHhCCCEEEEeCCCCCcccChHHHHHHHHHHcCCcEEEEeec
Q 019877          169 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN  248 (334)
Q Consensus       169 n~~Lv~~~L~~~Gi~a~~l~~~~~~~~~~~~i~~~i~~lL~~G~IPVi~g~~g~~~~~sD~lAa~lA~~l~Ad~LiilTD  248 (334)
                      +..+++..+...................+......+...++.+.+|++....+.+++|||.+|+++|.+++||.|+++||
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dnD~laa~vA~~~~Ad~lii~TD  162 (236)
T d2a1fa1          83 NGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATK  162 (236)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESSCCTTTSEECCHHHHHHHHHTTCEEEEESTTSCSSCCHHHHHHHHHHHTTCSEEEEEES
T ss_pred             HHHHHHHHHHhhccccchhhhhhhhhhHHHhhhhhhhhhhhhcccccccccccCCCCCCcHHHHHHHHHhchhHHHHhhc
Confidence            44444444455555554333322221111111234456778899999888888999999999999999999999999999


Q ss_pred             CCccccCCCCCCCCCcccccccHHHHhhCCCCcchHHHHHHHHhCCCcEEEEcCCChhHHHHHHcCCCCceEEe
Q 019877          249 VDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG  322 (334)
Q Consensus       249 VdGVyt~dP~~~p~aklI~~Is~~e~~~~g~~v~k~~Aa~~a~~~Gi~V~I~ng~~~~~l~~~l~g~~~GT~I~  322 (334)
                      ||||||+||+.+|+|+++++++++|+.+.|.+++|++|+++|.++||+++|+||++|++|.++++|+.+||+|.
T Consensus       163 VdGvyt~dP~~~~~A~~i~~i~~~e~l~~G~~v~k~~Aa~~a~~~gi~v~I~ng~~~~~l~~~l~Ge~~GTlI~  236 (236)
T d2a1fa1         163 VDGVYDCDPAKNPDAKLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTIC  236 (236)
T ss_dssp             SSSCBCC-------CCBCSEECHHHHHHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEEC
T ss_pred             ccccccccccccccccccccccHHHHHhcCCceeHHHHHHHHHHCCCeEEEEeCCCCcHHHHHHcCCCCcceeC
Confidence            99999999999999999999999999888999999999999999999999999999999999999999999983
>d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure