Citrus Sinensis ID: 019932
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 334 | ||||||
| 224082266 | 441 | predicted protein [Populus trichocarpa] | 0.904 | 0.684 | 0.629 | 1e-104 | |
| 225459507 | 911 | PREDICTED: uncharacterized protein LOC10 | 0.847 | 0.310 | 0.617 | 1e-104 | |
| 255545448 | 443 | conserved hypothetical protein [Ricinus | 0.925 | 0.697 | 0.631 | 1e-100 | |
| 224066853 | 440 | predicted protein [Populus trichocarpa] | 0.880 | 0.668 | 0.587 | 4e-96 | |
| 449499405 | 416 | PREDICTED: MORN repeat-containing protei | 0.862 | 0.692 | 0.576 | 2e-93 | |
| 449446211 | 420 | PREDICTED: LOW QUALITY PROTEIN: MORN rep | 0.862 | 0.685 | 0.576 | 2e-93 | |
| 449449731 | 430 | PREDICTED: uncharacterized protein LOC10 | 0.877 | 0.681 | 0.567 | 1e-90 | |
| 357461577 | 430 | Phosphatidylinositol-4-phosphate 5-kinas | 0.871 | 0.676 | 0.548 | 2e-86 | |
| 356515868 | 430 | PREDICTED: MORN repeat-containing protei | 0.874 | 0.679 | 0.511 | 1e-82 | |
| 302141842 | 376 | unnamed protein product [Vitis vinifera] | 0.604 | 0.537 | 0.702 | 1e-81 |
| >gi|224082266|ref|XP_002306624.1| predicted protein [Populus trichocarpa] gi|222856073|gb|EEE93620.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/337 (62%), Positives = 246/337 (72%), Gaps = 35/337 (10%)
Query: 1 MEGQKS-QAKLTRTQSWLLRSSPTIRSSIHSLSLSSVTEGEINKDHSHEHVDEEQQAAKE 59
M+ QKS Q KLTRTQS LLRSSPTIRSSIHSL+ SV E ++ K +H
Sbjct: 1 MDAQKSSQTKLTRTQSSLLRSSPTIRSSIHSLT--SVAEEDVIKTQQQQH---------- 48
Query: 60 NNNKNSNSRREEEPLLQKQEKKRKPPGSSNFHFQRRTGSGRFVVPVIAMASLSFFTLISL 119
++ E+ L ++++ K GS+ RRTGS RF PV+ + SL F +
Sbjct: 49 --------QKLEDGLDEQKKVKLHRSGST----PRRTGSTRFT-PVLTLVSL-IFFTLFS 94
Query: 120 FLLVYFLNLKREEIPTSENLLLALIFIAITLFLANKNKRLL-------KQLTQQTTKRLN 172
+F L+REEI TSENLLLALIFIAITLF A+KNK L+ KQL +Q+TKR N
Sbjct: 95 LSFFFFFYLRREEISTSENLLLALIFIAITLFFASKNKNLINQNLIVFKQLWEQSTKRFN 154
Query: 173 FSC-RNQPKPIQWFIGEANSSLKQRNEKEKKKIIREGVEFYSNGDFYEGEFHKGKSNGSG 231
FS R + K +QWFIG+ N S + +K +K+IIREGVEFYSNGDFYEGEFHKG NGSG
Sbjct: 155 FSTSRTKSKQVQWFIGDPNVSNNSKGKKLEKRIIREGVEFYSNGDFYEGEFHKGGCNGSG 214
Query: 232 VYNFFVNGRYEGEWIDGKYDGYGIESWARGSRYKGQYRQGLRHGYGVYRFYTGDSYAGQW 291
VYNFFVNGRYEG+WIDG+YDGYGIESWARGSRY+GQYRQGLRHGYGVYRFYTGDSYAG+W
Sbjct: 215 VYNFFVNGRYEGDWIDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEW 274
Query: 292 CNGQSHGIGVQTCADGSSYVGEFKCGVKHGLGFYHFR 328
NGQSHG+GVQTCADGS YVGEFKC VKHGLG YHFR
Sbjct: 275 FNGQSHGVGVQTCADGSCYVGEFKCAVKHGLGVYHFR 311
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459507|ref|XP_002284432.1| PREDICTED: uncharacterized protein LOC100245359 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255545448|ref|XP_002513784.1| conserved hypothetical protein [Ricinus communis] gi|223546870|gb|EEF48367.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224066853|ref|XP_002302247.1| predicted protein [Populus trichocarpa] gi|222843973|gb|EEE81520.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449499405|ref|XP_004160807.1| PREDICTED: MORN repeat-containing protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449446211|ref|XP_004140865.1| PREDICTED: LOW QUALITY PROTEIN: MORN repeat-containing protein 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449449731|ref|XP_004142618.1| PREDICTED: uncharacterized protein LOC101216886 [Cucumis sativus] gi|449527543|ref|XP_004170770.1| PREDICTED: uncharacterized protein LOC101232068 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357461577|ref|XP_003601070.1| Phosphatidylinositol-4-phosphate 5-kinase [Medicago truncatula] gi|355490118|gb|AES71321.1| Phosphatidylinositol-4-phosphate 5-kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356515868|ref|XP_003526619.1| PREDICTED: MORN repeat-containing protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|302141842|emb|CBI19045.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 334 | ||||||
| TAIR|locus:2201113 | 417 | AT1G21920 "AT1G21920" [Arabido | 0.697 | 0.558 | 0.537 | 6.8e-71 | |
| TAIR|locus:2204770 | 421 | AT1G77660 "AT1G77660" [Arabido | 0.688 | 0.546 | 0.502 | 1.8e-70 | |
| TAIR|locus:2130489 | 513 | AT4G17080 "AT4G17080" [Arabido | 0.464 | 0.302 | 0.598 | 7.2e-52 | |
| TAIR|locus:2063489 | 484 | AT2G35170 "AT2G35170" [Arabido | 0.359 | 0.247 | 0.708 | 7.7e-48 | |
| UNIPROTKB|P72606 | 349 | slr1485 "Slr1485 protein" [Syn | 0.347 | 0.332 | 0.422 | 2.1e-22 | |
| UNIPROTKB|E2QTV7 | 314 | RSPH1 "Uncharacterized protein | 0.359 | 0.382 | 0.427 | 2.1e-22 | |
| UNIPROTKB|E1BZ25 | 258 | RSPH1 "Uncharacterized protein | 0.359 | 0.465 | 0.419 | 2.4e-21 | |
| RGD|1307712 | 300 | Rsph1 "radial spoke head 1 hom | 0.359 | 0.4 | 0.411 | 3e-21 | |
| UNIPROTKB|Q8WYR4 | 309 | RSPH1 "Radial spoke head 1 hom | 0.359 | 0.388 | 0.419 | 3e-21 | |
| MGI|MGI:1194909 | 301 | Rsph1 "radial spoke head 1 hom | 0.359 | 0.398 | 0.411 | 8e-21 |
| TAIR|locus:2201113 AT1G21920 "AT1G21920" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 664 (238.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 129/240 (53%), Positives = 159/240 (66%)
Query: 95 RTGSGRFVVPVIAMAXXXXXXXXXXXXXVYFLNLKREEIPTSENXXXXXXXXXXXXXXXN 154
+TG R + P +A + + + +EI TSEN +
Sbjct: 61 KTGLTR-INPGLAFTMVSLSFLSLSSFFFFVVFSQTDEILTSENLLLALIFVAVALFFAS 119
Query: 155 KNKRLLKQLTQQTTKRLNFSCRN-QPKPIQWFIGEANSSLKQRNXXXXXXXXREGVEFYS 213
KN LL Q T K L F R+ + KP+QW+IG+ + K+ +EGV+FYS
Sbjct: 120 KNISLLNQ-TVIAIKNLGFQNRDSKSKPVQWYIGDDSKPEKK----VIKRFVKEGVQFYS 174
Query: 214 NGDFYEGEFHKGKSNGSGVYNFFVNGRYEGEWIDGKYDGYGIESWARGSRYKGQYRQGLR 273
NGDFYEGEF+KGK NGSGVY +FV GRYEG+W+DG+YDG+GIESWARGSRYKGQYRQGLR
Sbjct: 175 NGDFYEGEFNKGKCNGSGVYYYFVRGRYEGDWLDGRYDGHGIESWARGSRYKGQYRQGLR 234
Query: 274 HGYGVYRFYTGDSYAGQWCNGQSHGIGVQTCADGSSYVGEFKCGVKHGLGFYHFRYNFKF 333
HG+GVYRFYTGD YAG+W NGQSHG GVQ+C+DGSSY+GE + GVKHGLG YHFR K+
Sbjct: 235 HGFGVYRFYTGDCYAGEWFNGQSHGFGVQSCSDGSSYLGESRFGVKHGLGSYHFRNGDKY 294
|
|
| TAIR|locus:2204770 AT1G77660 "AT1G77660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130489 AT4G17080 "AT4G17080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063489 AT2G35170 "AT2G35170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P72606 slr1485 "Slr1485 protein" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QTV7 RSPH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BZ25 RSPH1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|1307712 Rsph1 "radial spoke head 1 homolog (Chlamydomonas)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8WYR4 RSPH1 "Radial spoke head 1 homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1194909 Rsph1 "radial spoke head 1 homolog (Chlamydomonas)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 334 | |||
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 1e-21 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 2e-17 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 4e-16 | |
| COG4642 | 139 | COG4642, COG4642, Uncharacterized protein conserve | 5e-15 | |
| COG4642 | 139 | COG4642, COG4642, Uncharacterized protein conserve | 1e-11 | |
| COG4642 | 139 | COG4642, COG4642, Uncharacterized protein conserve | 6e-10 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 8e-10 | |
| COG4642 | 139 | COG4642, COG4642, Uncharacterized protein conserve | 2e-06 | |
| pfam02493 | 23 | pfam02493, MORN, MORN repeat | 2e-04 | |
| smart00698 | 22 | smart00698, MORN, Possible plasma membrane-binding | 6e-04 | |
| pfam02493 | 23 | pfam02493, MORN, MORN repeat | 0.001 |
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 1e-21
Identities = 50/138 (36%), Positives = 66/138 (47%), Gaps = 23/138 (16%)
Query: 212 YSNGDFYEGEFHKGKSNGSGVY----NFFVNGR-------------------YEGEWIDG 248
+ +G YEGEF G +GSG Y GR +EG WI G
Sbjct: 51 WPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGLGYQRYPNGDVFEGSWIQG 110
Query: 249 KYDGYGIESWARGSRYKGQYRQGLRHGYGVYRFYTGDSYAGQWCNGQSHGIGVQTCADGS 308
+G G +WA G+ Y G + G G G + +GDSY GQW +G HG GV T +DG
Sbjct: 111 LQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTWSDGG 170
Query: 309 SYVGEFKCGVKHGLGFYH 326
YVG + G+K G G ++
Sbjct: 171 CYVGTWTRGLKDGKGVFY 188
|
Length = 765 |
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226989 COG4642, COG4642, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|202256 pfam02493, MORN, MORN repeat | Back alignment and domain information |
|---|
| >gnl|CDD|197832 smart00698, MORN, Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases | Back alignment and domain information |
|---|
| >gnl|CDD|202256 pfam02493, MORN, MORN repeat | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 334 | |||
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 99.97 | |
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 99.97 | |
| COG4642 | 139 | Uncharacterized protein conserved in bacteria [Fun | 99.76 | |
| COG4642 | 139 | Uncharacterized protein conserved in bacteria [Fun | 99.75 | |
| KOG0231 | 455 | consensus Junctional membrane complex protein Junc | 99.66 | |
| KOG0231 | 455 | consensus Junctional membrane complex protein Junc | 99.54 | |
| COG2849 | 230 | Uncharacterized protein conserved in bacteria [Fun | 99.29 | |
| COG2849 | 230 | Uncharacterized protein conserved in bacteria [Fun | 99.13 | |
| PF02493 | 23 | MORN: MORN repeat; InterPro: IPR003409 The MORN (M | 97.34 | |
| PF02493 | 23 | MORN: MORN repeat; InterPro: IPR003409 The MORN (M | 97.27 | |
| smart00698 | 26 | MORN Possible plasma membrane-binding motif in jun | 97.17 | |
| smart00698 | 26 | MORN Possible plasma membrane-binding motif in jun | 97.16 | |
| PF07202 | 179 | Tcp10_C: T-complex protein 10 C-terminus; InterPro | 89.0 | |
| PF14977 | 208 | FAM194: FAM194 protein | 83.0 |
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=280.47 Aligned_cols=156 Identities=28% Similarity=0.509 Sum_probs=138.5
Q ss_pred cccCCCCCeEEecccccchhhhhhhhhccceeeeEEEEecCCCEEEEEEECCEEeeeEEEEEccCcEEEEEEECCEEeeE
Q 019932 174 SCRNQPKPIQWFIGEANSSLKQRNEKEKKKIIREGVEFYSNGDFYEGEFHKGKSNGSGVYNFFVNGRYEGEWIDGKYDGY 253 (334)
Q Consensus 174 ~~~~~~~~i~~~~Ge~~~g~~~~g~~~~g~~~G~G~~~y~nG~~YeG~f~nGk~~G~G~~~~~~G~~YeG~wknGk~~G~ 253 (334)
+..++.+...|.+|..|.|. |.+++++|.|++.|+||..|+|+|.+|++||.|++++++|..|+|+|++|++||.
T Consensus 18 g~~hG~G~~~~~DG~~YeGe-----w~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~w~~gkkhG~ 92 (765)
T PLN03185 18 NVPEGPGKYLWSDGCMYEGE-----WRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGRWRLNLKHGL 92 (765)
T ss_pred CccccceEEEECCCCEEEEE-----EECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEEEeCCcccce
Confidence 35667777777777777655 5568999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCceEEEEEEeeeeeeeEEEEEcCCCEEEEEEECCeEeeeEEEEEcCCCEEEEEEeCCeEeeeEEEEEcCCcEe
Q 019932 254 GIESWARGSRYKGQYRQGLRHGYGVYRFYTGDSYAGQWCNGQSHGIGVQTCADGSSYVGEFKCGVKHGLGFYHFRYNFKF 333 (334)
Q Consensus 254 G~~~~~nG~~YeG~fkng~~~G~G~~y~~nG~~yeG~~knG~~~G~G~~~~~dG~~yeG~fknGk~~G~G~~~~~nG~~Y 333 (334)
|+++|+||.+|+|+|++|+++|.|++.++||.+|+|+|++|++||.|+++++||.+|+|+|.+|++||.|+++++||.+|
T Consensus 93 G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~G~y~~~DG~~Y 172 (765)
T PLN03185 93 GYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGVYTWSDGGCY 172 (765)
T ss_pred eEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceeeEEEEECCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred C
Q 019932 334 R 334 (334)
Q Consensus 334 e 334 (334)
+
T Consensus 173 ~ 173 (765)
T PLN03185 173 V 173 (765)
T ss_pred E
Confidence 4
|
|
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >COG4642 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG4642 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG2849 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG2849 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins () | Back alignment and domain information |
|---|
| >PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins () | Back alignment and domain information |
|---|
| >smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases | Back alignment and domain information |
|---|
| >smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases | Back alignment and domain information |
|---|
| >PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ] | Back alignment and domain information |
|---|
| >PF14977 FAM194: FAM194 protein | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 334 | |||
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 3e-31 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 3e-26 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 8e-18 |
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-31
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 16/132 (12%)
Query: 211 FYSNGDFYEGEFHKGKSNGSGVYNFFVNG-RYEGEWIDGKYDGYGIESWARGSR-YKGQY 268
F+ +G EG + G GVY + +G +G ++DG+ +G E G +KGQY
Sbjct: 1 FFFDGSTLEGYYVDDALQGQGVY-TYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQY 59
Query: 269 RQGLRHGYGVYRFYTGDSYAGQWC-NGQSHGIGVQTC------------ADGSSYVGEFK 315
+ +RHG + G S G+ +G+ G + DG G+
Sbjct: 60 KDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLA 119
Query: 316 CGVKHGLGFYHF 327
+ G HF
Sbjct: 120 TLMSTEEGRPHF 131
|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293 | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Length = 293 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 334 | |||
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.96 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.94 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.04 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.0 |
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=232.15 Aligned_cols=123 Identities=26% Similarity=0.408 Sum_probs=101.2
Q ss_pred EecCCCEEEEEEECCEEeeeEEEEEccCcEEEEEEECCEEeeEEEEEEcCCc-eEEEEEEeeeeeeeEEEEEcCCCEEEE
Q 019932 211 FYSNGDFYEGEFHKGKSNGSGVYNFFVNGRYEGEWIDGKYDGYGIESWARGS-RYKGQYRQGLRHGYGVYRFYTGDSYAG 289 (334)
Q Consensus 211 ~y~nG~~YeG~f~nGk~~G~G~~~~~~G~~YeG~wknGk~~G~G~~~~~nG~-~YeG~fkng~~~G~G~~y~~nG~~yeG 289 (334)
+|+||.+|+|+|++|++||.|+++++||.+|+|+|++|++||.|+++|+||. +|+|+|++|++||.|+++++||.+|+|
T Consensus 1 ~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~Y~G~~~~g~~~G~G~~~~~~G~~~y~G~~~~g~~~G~G~~~~~~G~~y~G 80 (293)
T 1h3i_A 1 FFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVG 80 (293)
T ss_dssp CCSSSCCCCEEEETTEEEEEEEEECTTSCEEEEEEETTEEEEEEEEECSSSCEEEEEEEETTEECSEEEEECTTSCEEEE
T ss_pred CcCCCCEEEEEEECCEeeEEEEEEECCCCEEEEEEECCEEEeCEEEEECCCCEEEEEEEECCEEEeeEEEEECCCCEEEE
Confidence 3678888888888888888888888888888888888888888888888888 788888888888888888888888888
Q ss_pred EEE-CCeEeee-EEEEEcCCC-EEEEEEeCCeEe-eeEEEE--EcCCcEe
Q 019932 290 QWC-NGQSHGI-GVQTCADGS-SYVGEFKCGVKH-GLGFYH--FRYNFKF 333 (334)
Q Consensus 290 ~~k-nG~~~G~-G~~~~~dG~-~yeG~fknGk~~-G~G~~~--~~nG~~Y 333 (334)
+|+ ||++||. |+++++||. .|+|.|++|++| |.|+++ ++||+.+
T Consensus 81 ~~~~~g~~~G~gG~~~~~~G~~~y~G~~~~g~~~~G~~~~~~~~~~g~~~ 130 (293)
T 1h3i_A 81 EVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRPH 130 (293)
T ss_dssp ECCTTSCSCEEEEEEECTTSSEEEEEEEETTEEEEEEEEEEEECTTTSCE
T ss_pred EEeECCeEeCCeEEEEECCCCEEEEEEEECCEEEccceEEEEecCCcceE
Confidence 888 8888888 888888888 488888888888 888877 6777653
|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00