Citrus Sinensis ID: 019938
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 333 | ||||||
| 224104535 | 359 | predicted protein [Populus trichocarpa] | 0.975 | 0.905 | 0.634 | 1e-126 | |
| 147768910 | 375 | hypothetical protein VITISV_024457 [Viti | 0.990 | 0.88 | 0.673 | 1e-125 | |
| 359487457 | 363 | PREDICTED: protein N-terminal asparagine | 0.990 | 0.909 | 0.650 | 1e-123 | |
| 356525612 | 343 | PREDICTED: protein N-terminal asparagine | 0.984 | 0.956 | 0.635 | 1e-122 | |
| 449463783 | 347 | PREDICTED: protein N-terminal asparagine | 0.984 | 0.945 | 0.616 | 1e-120 | |
| 297741220 | 339 | unnamed protein product [Vitis vinifera] | 0.915 | 0.899 | 0.662 | 1e-117 | |
| 357451021 | 384 | Protein N-terminal asparagine amidohydro | 0.918 | 0.796 | 0.617 | 1e-114 | |
| 297824457 | 348 | N-terminal asparagine amidohydrolase fam | 0.993 | 0.951 | 0.602 | 1e-113 | |
| 18406532 | 347 | protein N-terminal asparagine amidohydro | 0.996 | 0.956 | 0.603 | 1e-112 | |
| 21554202 | 347 | unknown [Arabidopsis thaliana] | 0.996 | 0.956 | 0.600 | 1e-111 |
| >gi|224104535|ref|XP_002313470.1| predicted protein [Populus trichocarpa] gi|222849878|gb|EEE87425.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/345 (63%), Positives = 270/345 (78%), Gaps = 20/345 (5%)
Query: 1 MIFVGGLPFSTNNSSWSSSSSQGSDILVALLEHPVLVSASHSFKSMEETKVSVSSETPSP 60
MIFV GL F T+ SSQ LV LLEHP LVSAS+SF++M+E K+S S E
Sbjct: 1 MIFVDGLTFPTD-------SSQERGALVTLLEHPKLVSASNSFEAMQEVKLSASKEYALQ 53
Query: 61 SKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLCQ 120
++VYVFQRE+ATVDPAL+D++GTDEATTCVGLVIRN+RN MTS+AHMD+ ++VDIGL Q
Sbjct: 54 GRWVYVFQREFATVDPALIDFIGTDEATTCVGLVIRNQRNGMTSVAHMDSTKVVDIGLAQ 113
Query: 121 MLSLVVDHDLDAELD-------------HANGTTISECYSDMDGYSLPLCRKLVDTLQRR 167
MLS+VVD + D +LD ANG+T SE + DGYS PLC K+++ L++
Sbjct: 114 MLSIVVDKNFDDDLDVHLIGGFEDVLPKQANGSTRSETQAKGDGYSFPLCTKIIENLRKG 173
Query: 168 QEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRIR 227
+EKFH+QTL VLGHNTKRDSQGNAYP+F+GFLV+T TGS+ PASFD T+RCPDE+VRRIR
Sbjct: 174 KEKFHIQTLFVLGHNTKRDSQGNAYPVFNGFLVKTSTGSVIPASFDRTTRCPDEIVRRIR 233
Query: 228 VTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRRCSTSPS 287
+++S ED +WNGKLLETYDTQ DRFVIAPC WT ++H+ ++LQ LSDEEIL CSTSPS
Sbjct: 234 ISASNEDPTWNGKLLETYDTQNDRFVIAPCSWTFWQVHVALTLQDLSDEEILLECSTSPS 293
Query: 288 AEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRR 332
AEGP+FV+NLRRQW+YLIK+P W TFP + PRVF+ ADG W+R
Sbjct: 294 AEGPEFVDNLRRQWDYLIKQPLWNLTFPTRHPRVFEWTADGSWKR 338
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147768910|emb|CAN75884.1| hypothetical protein VITISV_024457 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359487457|ref|XP_002268254.2| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356525612|ref|XP_003531418.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449463783|ref|XP_004149611.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] gi|449526561|ref|XP_004170282.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297741220|emb|CBI32171.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357451021|ref|XP_003595787.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] gi|355484835|gb|AES66038.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297824457|ref|XP_002880111.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325950|gb|EFH56370.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18406532|ref|NP_566017.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gi|20197192|gb|AAC16088.2| expressed protein [Arabidopsis thaliana] gi|26450109|dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gi|28827584|gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gi|330255324|gb|AEC10418.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21554202|gb|AAM63281.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 333 | ||||||
| TAIR|locus:2050549 | 347 | AT2G44420 "AT2G44420" [Arabido | 1.0 | 0.959 | 0.593 | 5.5e-109 | |
| ZFIN|ZDB-GENE-040426-1896 | 306 | zgc:77869 "zgc:77869" [Danio r | 0.804 | 0.875 | 0.304 | 7.3e-27 | |
| UNIPROTKB|E1B891 | 310 | NTAN1 "Uncharacterized protein | 0.786 | 0.845 | 0.301 | 2.2e-25 | |
| RGD|1305160 | 309 | Ntan1 "N-terminal asparagine a | 0.792 | 0.854 | 0.293 | 2.2e-25 | |
| UNIPROTKB|Q28955 | 310 | NTAN1 "Protein N-terminal aspa | 0.786 | 0.845 | 0.307 | 2.9e-25 | |
| MGI|MGI:108471 | 310 | Ntan1 "N-terminal Asn amidase" | 0.792 | 0.851 | 0.293 | 5.9e-25 | |
| UNIPROTKB|Q96AB6 | 310 | NTAN1 "Protein N-terminal aspa | 0.786 | 0.845 | 0.294 | 1.2e-24 | |
| UNIPROTKB|F1PPS3 | 313 | NTAN1 "Uncharacterized protein | 0.843 | 0.897 | 0.282 | 4.2e-24 | |
| UNIPROTKB|E1C4J5 | 310 | NTAN1 "Uncharacterized protein | 0.807 | 0.867 | 0.275 | 6.3e-21 | |
| UNIPROTKB|E9PTV5 | 309 | Ntan1 "Protein Ntan1" [Rattus | 0.792 | 0.854 | 0.261 | 4.7e-18 |
| TAIR|locus:2050549 AT2G44420 "AT2G44420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 206/347 (59%), Positives = 258/347 (74%)
Query: 1 MIFVGGLPFXXXXXXXXXXXXXX-XDILVALLEHPVLVSASHSFKSMEETKVSVS---SE 56
MI+VGG+ F +LV ++ HPV+ AS SFK++EE VS SE
Sbjct: 1 MIYVGGVQFLDESSSFSLSSSSQGSSLLVDVMSHPVITLASDSFKNLEEKNVSFDESDSE 60
Query: 57 TPSPSKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDI 116
+ + +YVY+FQRE+A V+PALVD+VGTDEATTCVGLVIRNR++ MTS+AHMD+PEIVD+
Sbjct: 61 SSTKDRYVYIFQREFAVVNPALVDFVGTDEATTCVGLVIRNRKSGMTSVAHMDSPEIVDL 120
Query: 117 GLCQMLSLVVDHDLDAELD-HANG----TTISEC-----YSDMDGYSLPLCRKLVDTLQR 166
G+ QML LV+ D+DAELD H G I Y+ +GYS PLC KLV+TLQ+
Sbjct: 121 GISQMLLLVLQDDVDAELDVHMVGGYEDVDIKNADGVGDYAKPEGYSFPLCCKLVETLQK 180
Query: 167 RQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRI 226
R+E FH+QTL +LGHNTK DSQ N PIF+G LV T TG++ PASF+ TSRCPDE+VRRI
Sbjct: 181 RRENFHIQTLFILGHNTKLDSQANTCPIFNGCLVNTSTGAILPASFNRTSRCPDEIVRRI 240
Query: 227 RVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRRCSTSP 286
RV+SS+ED+SW GKLL+TYDT+TDRF+IAPCRWT+R + V L QL+DEEIL CSTSP
Sbjct: 241 RVSSSFEDSSWKGKLLDTYDTKTDRFIIAPCRWTMRLIEYVWELNQLTDEEILTNCSTSP 300
Query: 287 SAEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRRC 333
SAEGPDFV +LRR W YL+K P+W +TFP +QPRVF+R DG W++C
Sbjct: 301 SAEGPDFVNSLRRNWGYLLKYPEWSKTFPRRQPRVFERTVDGHWKKC 347
|
|
| ZFIN|ZDB-GENE-040426-1896 zgc:77869 "zgc:77869" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1B891 NTAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1305160 Ntan1 "N-terminal asparagine amidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q28955 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:108471 Ntan1 "N-terminal Asn amidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96AB6 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PPS3 NTAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C4J5 NTAN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PTV5 Ntan1 "Protein Ntan1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 333 | |||
| PF14736 | 274 | N_Asn_amidohyd: Protein N-terminal asparagine amid | 100.0 | |
| PRK13490 | 162 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.6 | |
| PRK13493 | 213 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.4 | |
| PRK13498 | 167 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.39 | |
| PRK13488 | 157 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.24 | |
| PRK13487 | 201 | chemoreceptor glutamine deamidase CheD; Provisiona | 94.99 | |
| PRK13491 | 199 | chemoreceptor glutamine deamidase CheD; Provisiona | 94.42 | |
| PRK13497 | 184 | chemoreceptor glutamine deamidase CheD; Provisiona | 94.37 | |
| PRK13495 | 159 | chemoreceptor glutamine deamidase CheD; Provisiona | 94.09 | |
| COG1871 | 164 | CheD Chemotaxis protein; stimulates methylation of | 93.92 | |
| PRK13494 | 163 | chemoreceptor glutamine deamidase CheD; Provisiona | 92.5 | |
| PRK13489 | 233 | chemoreceptor glutamine deamidase CheD; Provisiona | 92.47 |
| >PF14736 N_Asn_amidohyd: Protein N-terminal asparagine amidohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-111 Score=797.74 Aligned_cols=269 Identities=39% Similarity=0.630 Sum_probs=262.0
Q ss_pred hhccCcceEeecCCCCCCCCeEEEEecceeEeeCCC--ceeeeccCCCceeeEEEEEeCCCCceEEEeccCCcchhhhHH
Q 019938 42 SFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPA--LVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLC 119 (333)
Q Consensus 42 ~l~~~p~~~v~~~~~~~~~~~lLYV~QrE~A~~~P~--~v~~lGSDdATTChivVlR~~~sG~t~laH~Dgs~~v~~~v~ 119 (333)
+|+++|.+.++ |+|+|||+|||||||+|+ +|+|||||||||||||||||++|||||||||||+++ +++|+
T Consensus 1 ~~~s~~~~~~~-------~~~~lYV~QrE~A~~~p~d~~v~~lGSDdATTC~ivVlRh~~sg~t~laH~Dgs~~-~~~v~ 72 (274)
T PF14736_consen 1 QFRSQPHKVVG-------PKGLLYVQQREFATTTPADKSVSILGSDDATTCHIVVLRHTGSGATCLAHLDGSDT-EEGVA 72 (274)
T ss_pred CcccCCceecC-------CCeeEEEecceeEEecCccCccceEecCCCcEEEEEEEEcCCCCcEEEEEecCCCh-hhHHH
Confidence 58899999998 999999999999999999 699999999999999999999999999999999997 99999
Q ss_pred HHHHHhhcccccccccCCCccee---eccccCCCCCCHHHHHHHHHHHhccCccEEEeeeeecCCCCcccCCCCCcceEE
Q 019938 120 QMLSLVVDHDLDAELDHANGTTI---SECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFH 196 (333)
Q Consensus 120 ~ml~~i~~~s~~~~~~~~~grle---vGGf~D~~g~S~~L~~~lL~~f~~~~~~~hL~t~CV~~~Nt~~~~~g~~~Pii~ 196 (333)
+||+++++++.++ .+|+|| ||||.|++|||++|+.+||++||+++++|||+||||+++||+++ +|++|||||
T Consensus 73 ~ml~~v~~~~~~~----~~~~lelhLVGGF~D~~~~S~~l~~~ll~~f~~~~~~~~L~t~Cv~~~Nt~~~-~g~~~Pii~ 147 (274)
T PF14736_consen 73 QMLSSVQSLSNGY----PEGRLELHLVGGFDDDRGYSQKLSLNLLEAFHKQPEEIHLRTFCVTELNTRVE-DGIHRPIIY 147 (274)
T ss_pred HHHHHHHhhccCC----CCCceEEEEEccccCcccchHHHHHHHHHHHHcCcceEEEEEEEEccCCCccC-CCccCcEEE
Confidence 9999999998877 899999 89999999999999999999999999999999999999999987 599999999
Q ss_pred EEEEEecCCeeecccCCCCCCCChHHHHHhhhhccccccCCCCeeeeeeeCCCCeEEeccccccccchhHHhhhccCCHH
Q 019938 197 GFLVETCTGSLSPASFDGTSRCPDEMVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDE 276 (333)
Q Consensus 197 Gi~VnvkTg~ifpAsF~~~~rGP~~~lR~aR~~~~~~~~~~gg~l~~iYD~~~~~l~I~Pf~~~p~~~~v~~~L~~~sD~ 276 (333)
||+||+|||+||||+| ++|||+|+||+||+++ ++++|+||||+++++|+|+||+|+|++ ++++|| +|||+
T Consensus 148 Gi~VnvkTG~IfpAsF--~~rGP~~~lR~aR~~~------~~~~l~~iYD~~~~~l~I~Pf~~~p~~-~~~~~l-~~~D~ 217 (274)
T PF14736_consen 148 GIAVNVKTGEIFPASF--PDRGPDEILRSARVFT------GGGRLLNIYDTETDQLRIGPFHWRPFP-HADFWL-SQSDS 217 (274)
T ss_pred EEEEEecCCeEecccC--cccCCcHHHHHHHHhc------CCCceEEEEECCCCeEEECCCcCCCcc-ChHHHh-hCCHH
Confidence 9999999999999999 9999999999999995 689999999999999999999999996 899999 89999
Q ss_pred HHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCCCcCCCCCCceEEeCCCCCeeeC
Q 019938 277 EILRRCSTSPSAEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRRC 333 (333)
Q Consensus 277 ~iL~~lSTSP~aEpPhFv~~iR~tl~fl~~hP~~~~~Fp~~~P~~y~r~~~G~W~~~ 333 (333)
+|||+|||||+|||||||++||++|+||++||+|+++||+|||++|+|+++|+|++|
T Consensus 218 ~iL~~lSTSP~aEpp~Fv~~ir~~l~fl~~hP~p~~~Fp~~~p~~y~r~~~G~W~~~ 274 (274)
T PF14736_consen 218 EILQYLSTSPEAEPPHFVEHIRSTLRFLQEHPDPDTLFPDNQPRVYRRDEDGRWERV 274 (274)
T ss_pred HHHHhcCCCcCCCCchHHHHHHHHHHHHHHCCCHHHhCCCCCceEEEECCCCCEEeC
Confidence 999999999999999999999999999999999999999999999999999999996
|
|
| >PRK13490 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13493 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13498 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13488 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13487 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13491 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13497 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13495 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >COG1871 CheD Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13494 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13489 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 333 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 2e-04
Identities = 38/312 (12%), Positives = 82/312 (26%), Gaps = 76/312 (24%)
Query: 49 TKVSVSSETPSPSKYVYVFQRE--YATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIA 106
+ + PS +Y+ QR+ Y V + R + +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-------YLKLRQALLELR 148
Query: 107 HMDNPEIVDIGLCQML-----SLVVD--HDLDAELDHANGT---TISECYSDMDGYSL-- 154
N + + +L + +D + + C S +
Sbjct: 149 PAKN-----VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 155 PLCRKLVDTLQRRQEKFH--VQTLHVLGHNTKRDSQGNAYPIFHGFLV--ETCTGSLSPA 210
L ++ R + +H + +R + Y + LV A
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE--NCLLVLLNVQNAKAWNA 261
Query: 211 SFDGTSRCPDEMVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSL 270
F+ C +I +T T Q F+ A + H M+L
Sbjct: 262 -FNL--SC------KILLT--------------TRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 271 QQLSDEEILRR-------------CSTSPSAEG--PDFVENLRRQWNYLIKRPDWRETFP 315
+ +L + +T+P + + + W+ W+
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN------WKHVNC 352
Query: 316 WKQPRVFQRAAD 327
K + + + +
Sbjct: 353 DKLTTIIESSLN 364
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 333 | |||
| 2f9z_C | 159 | Protein (chemotaxis methylation protein); bacteria | 94.2 |
| >2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3 | Back alignment and structure |
|---|
Probab=94.20 E-value=0.41 Score=41.84 Aligned_cols=125 Identities=15% Similarity=0.137 Sum_probs=86.2
Q ss_pred eEEEEecceeEeeC-CC-ceee-eccCCCceeeEEEEEeCCCCceEEEecc---C-------CcchhhhHHHHHHHhhcc
Q 019938 62 KYVYVFQREYATVD-PA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMD---N-------PEIVDIGLCQMLSLVVDH 128 (333)
Q Consensus 62 ~lLYV~QrE~A~~~-P~-~v~~-lGSDdATTChivVlR~~~sG~t~laH~D---g-------s~~v~~~v~~ml~~i~~~ 128 (333)
..++|.++||.++. |. -..+ ||| |+.|+|+++..+.-.++|+= . ....+.++..|++.+...
T Consensus 3 ~~i~v~~Ge~~v~~~p~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~am~~Li~~m~~~ 77 (159)
T 2f9z_C 3 MKKVIGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKM 77 (159)
T ss_dssp CEEECCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCeEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHc
Confidence 45799999999985 55 3556 887 99999999999999999983 2 235667999999999877
Q ss_pred cccccccCCCccee---eccccC----CCCCCHHHHHHHHHHHhccCccEEEeeeeecCCCCcccCCCCCcceEEEEEEE
Q 019938 129 DLDAELDHANGTTI---SECYSD----MDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVE 201 (333)
Q Consensus 129 s~~~~~~~~~grle---vGGf~D----~~g~S~~L~~~lL~~f~~~~~~~hL~t~CV~~~Nt~~~~~g~~~Pii~Gi~Vn 201 (333)
.. ...+|+ .||-.- .....++...-..+.|.+.... +.--=+++..- . =+-++
T Consensus 78 Ga------~~~~L~aKifGGA~m~~~~~~~IG~rNv~~a~~~L~~~gI~--i~aeD~GG~~g----------R--~i~f~ 137 (159)
T 2f9z_C 78 GA------KVERLEAKIAGGASMFESKGMNIGARNVEAVKKHLKDFGIK--LLAEDTGGNRA----------R--SVEYN 137 (159)
T ss_dssp TC------CGGGCEEEEEECCCCSCCCSSCHHHHHHHHHHHHHHHTTCC--EEEEEECCSSC----------E--EEEEE
T ss_pred CC------CHHHEEEEEEeCcccCcccccChHHHHHHHHHHHHHHCCCc--EEEEeCCCCCC----------c--EEEEE
Confidence 43 567888 566432 2346677777778888775543 33333333222 1 15568
Q ss_pred ecCCeeeccc
Q 019938 202 TCTGSLSPAS 211 (333)
Q Consensus 202 vkTg~ifpAs 211 (333)
+.||++.=-+
T Consensus 138 ~~tG~v~vk~ 147 (159)
T 2f9z_C 138 IETGKLLVRK 147 (159)
T ss_dssp TTTTEEEEEC
T ss_pred CCCCEEEEEE
Confidence 8888876444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 333 | |||
| d2f9zc1 | 157 | Chemoreceptor glutamine deamidase CheD {Thermotoga | 94.8 |
| >d2f9zc1 d.194.1.3 (C:1-157) Chemoreceptor glutamine deamidase CheD {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CNF1/YfiH-like putative cysteine hydrolases superfamily: CNF1/YfiH-like putative cysteine hydrolases family: CheD-like domain: Chemoreceptor glutamine deamidase CheD species: Thermotoga maritima [TaxId: 2336]
Probab=94.80 E-value=0.22 Score=41.34 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=86.5
Q ss_pred EecceeEeeC-CC-ceee-eccCCCceeeEEEEEeCCCCceEEEeccC----------CcchhhhHHHHHHHhhcccccc
Q 019938 66 VFQREYATVD-PA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMDN----------PEIVDIGLCQMLSLVVDHDLDA 132 (333)
Q Consensus 66 V~QrE~A~~~-P~-~v~~-lGSDdATTChivVlR~~~sG~t~laH~Dg----------s~~v~~~v~~ml~~i~~~s~~~ 132 (333)
|.++||+++. |. -+.+ ||| |+.|+|.++..+.-.|+|+== ....+.++..|++.+.....
T Consensus 5 vgiGe~~v~~~~~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~ai~~Li~~m~~~Ga-- 77 (157)
T d2f9zc1 5 IGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKMGA-- 77 (157)
T ss_dssp CCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTTTC--
T ss_pred EEeccEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCchhhHHHHHHHHHHHHHHHcCC--
Confidence 6789999984 66 3565 897 999999999999999999821 23367799999999988743
Q ss_pred cccCCCccee---eccccC----CCCCCHHHHHHHHHHHhccCccEEEeeeeecCCCCcccCCCCCcceEEEEEEEecCC
Q 019938 133 ELDHANGTTI---SECYSD----MDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTG 205 (333)
Q Consensus 133 ~~~~~~grle---vGGf~D----~~g~S~~L~~~lL~~f~~~~~~~hL~t~CV~~~Nt~~~~~g~~~Pii~Gi~VnvkTg 205 (333)
...+++ .||-.- .....++...-.++.|++.. |.|.---+++..-+ =+.+++.||
T Consensus 78 ----~~~~l~aKifGGA~m~~~~~~~IG~rNv~~a~~~L~~~g--I~i~a~dvGG~~gR------------~i~f~~~tG 139 (157)
T d2f9zc1 78 ----KVERLEAKIAGGASMFESKGMNIGARNVEAVKKHLKDFG--IKLLAEDTGGNRAR------------SVEYNIETG 139 (157)
T ss_dssp ----CGGGCEEEEEECCCCSCCCSSCHHHHHHHHHHHHHHHTT--CCEEEEEECCSSCE------------EEEEETTTT
T ss_pred ----ChHHeEEEEecCeeccCCCCCCcHHHHHHHHHHHHHHCC--CcEEEEECCCCCCc------------EEEEECCCC
Confidence 566777 566432 22455677777788887755 45555566665543 256888999
Q ss_pred eeeccc
Q 019938 206 SLSPAS 211 (333)
Q Consensus 206 ~ifpAs 211 (333)
+++=-+
T Consensus 140 ~v~vk~ 145 (157)
T d2f9zc1 140 KLLVRK 145 (157)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 887444
|