Citrus Sinensis ID: 019942

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
Protein Sequence
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTPTRFEAPQES
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccEEEcccHHHHHHHHHHHccccccccccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHccccccEEcccEEcccccHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccEEEEEEcHHHHHHHHHHHccccHHccccccccccccEEEEEEccHcccccccccccccHHHHHHHHHHHHcccccEEcEEEEcccHHHHHHHHHHcHHHHccccccccEEEEEcccccccccHHccccHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MMNSYVVIRLLLLEVLSAIafaspstvpafLWSThhqkissnnalnyqtlspKDLAKAVLTQggwadllcsgrqspqsVDVALVFVGRElqsshisgnkhadLALVDTLKVsftksnfsmaFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYgdtqsmkqpkqprpetwgnqrswvhpwFIHAGEVISELIDSVEKSGAKYTVlyvsdpvrsvqypshQELERFLAESvagnksanntgcdevCQFKSSLFEGILVGIVLLLILVSGLCcmmgidtptrfeapqes
Flexible Loop (DISEMBL)
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSshisgnkhadlALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDtqsmkqpkqprpetWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTptrfeapqes
Low Complexity Region (SEG)
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEgilvgivlllilvsglCCMMGIDTPTRFEAPQES
Disordered region (IsUnstruct)
****YVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGD**************WGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAG***ANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDT**********
Disordered Region (DISOPRED)
***SYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKI***NAL*YQTLSPKDLAKAVLTQGGWA***********SVDVALVFVGR*********************KVSFTKSNFSMAFPYIVSAG**TM**SLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVH***************DLIVVCYGD**************************IHAGEVISELIDSVEKSGAKYTVLYVSDPVR***************************GCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTPT*F******
Disordered Region (DISEMBL)
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDT**************GNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTPTRFEAPQES
Disordered Region (DISPRO)
*MNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDT**************GNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGN*SANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTPTRF******
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGIDTPTRFEAPQES
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
147774374	315	hypothetical protein VITISV_041203 [Viti	0.876	0.926	0.632	1e-103
225435830	315	PREDICTED: uncharacterized protein LOC10	0.876	0.926	0.635	1e-103
297746517	348	unnamed protein product [Vitis vinifera]	0.876	0.839	0.635	1e-103
224056921	316	predicted protein [Populus trichocarpa]	0.888	0.936	0.596	1e-100
255564784	318	conserved hypothetical protein [Ricinus	0.864	0.905	0.607	1e-100
356538489	318	PREDICTED: uncharacterized protein LOC10	0.885	0.927	0.558	3e-96
359807267	317	uncharacterized protein LOC100783869 pre	0.885	0.930	0.549	7e-95
388503480	318	unknown [Medicago truncatula]	0.909	0.952	0.554	3e-93
357474137	318	hypothetical protein MTR_4g076880 [Medic	0.873	0.915	0.549	2e-88
388515595	319	unknown [Lotus japonicus]	0.879	0.918	0.522	2e-87

>gi|147774374|emb|CAN72399.1| hypothetical protein VITISV_041203 [Vitis vinifera]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/313 (63%), Positives = 237/313 (75%), Gaps = 21/313 (6%)

Query: 22  ASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDV 81
           A PSTVPAFLWS H  ++    A+NYQTLSPKDLAK+V+++GGW++LLCSG +  Q VD+
Sbjct: 23  ALPSTVPAFLWSHHQXEM--KEAVNYQTLSPKDLAKSVVSEGGWSNLLCSGEKDQQPVDL 80

Query: 82  ALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYI-VSAGEETMESSLFSE 140
           ALVFVGREL S  ISG+KHAD ALVD LKVSF +SNFSMAFPY+ VS  +E ME+SL S 
Sbjct: 81  ALVFVGRELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISG 140

Query: 141 FTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYG 200
           FTE C  D  V+NVAF ESC+VEG NF KLADLHSVHD+L  R +    G  DL++ C+G
Sbjct: 141 FTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHG 200

Query: 201 DTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSV 260
            +  +++  Q R E+                EV SELI S+E+SG KYTVLYVSDP RS+
Sbjct: 201 GSH-LEELDQ-RLES----------------EVFSELISSLEQSGTKYTVLYVSDPFRSI 242

Query: 261 QYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMG 320
           QYPS+++LERFLAE   GN SAN+T CDEVCQ KSSL EG+LVGIVLL+IL+SGLCCMMG
Sbjct: 243 QYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIILISGLCCMMG 302

Query: 321 IDTPTRFEAPQES 333
           IDTPTRFEAPQ+S
Sbjct: 303 IDTPTRFEAPQDS 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435830|ref|XP_002285774.1| PREDICTED: uncharacterized protein LOC100262157 [Vitis vinifera]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 236/313 (75%), Gaps = 21/313 (6%)

Query: 22  ASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDV 81
           A PSTVPAFLWS HHQ      A+NYQTL PKDLAK+V+++GGW++LLCSG +  Q VD+
Sbjct: 23  ALPSTVPAFLWS-HHQ-FEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDL 80

Query: 82  ALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYI-VSAGEETMESSLFSE 140
           ALVFVGREL S  ISG+KHAD ALVD LKVSF +SNFSMAFPY+ VS  +E ME+SL S 
Sbjct: 81  ALVFVGRELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISG 140

Query: 141 FTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYG 200
           FTE C  D  V+NVAF ESC+VEG NF KLADLHSVHD+L  R +    G  DL++ C+G
Sbjct: 141 FTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHG 200

Query: 201 DTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSV 260
            +  +++  Q R E+                EV SELI S+E+SG KYTVLYVSDP RS+
Sbjct: 201 GSH-LEELDQ-RLES----------------EVFSELISSLEQSGTKYTVLYVSDPFRSI 242

Query: 261 QYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMG 320
           QYPS+++LERFLAE   GN SAN+T CDEVCQ KSSL EG+LVGIVLL+IL+SGLCCMMG
Sbjct: 243 QYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIILISGLCCMMG 302

Query: 321 IDTPTRFEAPQES 333
           IDTPTRFEAPQ+S
Sbjct: 303 IDTPTRFEAPQDS 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746517|emb|CBI16573.3| unnamed protein product [Vitis vinifera]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 236/313 (75%), Gaps = 21/313 (6%)

Query: 22  ASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDV 81
           A PSTVPAFLWS HHQ      A+NYQTL PKDLAK+V+++GGW++LLCSG +  Q VD+
Sbjct: 56  ALPSTVPAFLWS-HHQ-FEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDL 113

Query: 82  ALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYI-VSAGEETMESSLFSE 140
           ALVFVGREL S  ISG+KHAD ALVD LKVSF +SNFSMAFPY+ VS  +E ME+SL S 
Sbjct: 114 ALVFVGRELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISG 173

Query: 141 FTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYG 200
           FTE C  D  V+NVAF ESC+VEG NF KLADLHSVHD+L  R +    G  DL++ C+G
Sbjct: 174 FTETCGHDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHG 233

Query: 201 DTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSV 260
            +  +++  Q R E+                EV SELI S+E+SG KYTVLYVSDP RS+
Sbjct: 234 GSH-LEELDQ-RLES----------------EVFSELISSLEQSGTKYTVLYVSDPFRSI 275

Query: 261 QYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMG 320
           QYPS+++LERFLAE   GN SAN+T CDEVCQ KSSL EG+LVGIVLL+IL+SGLCCMMG
Sbjct: 276 QYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIILISGLCCMMG 335

Query: 321 IDTPTRFEAPQES 333
           IDTPTRFEAPQ+S
Sbjct: 336 IDTPTRFEAPQDS 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056921|ref|XP_002299090.1| predicted protein [Populus trichocarpa] gi|222846348|gb|EEE83895.1| predicted protein [Populus trichocarpa]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/320 (59%), Positives = 234/320 (73%), Gaps = 24/320 (7%)

Query: 16  LSAIAFASPS--TVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLTQGGWADLLCSGR 73
           LS +  +SPS  TVPAFLWS HH     +  +NYQT+S KDLA++VL++GGW++LLCS +
Sbjct: 19  LSFLHASSPSSTTVPAFLWSPHHPHHQMSEVVNYQTISSKDLARSVLSEGGWSNLLCSEK 78

Query: 74  QSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETM 133
           +  QSVD+ALVF+GR L S+ +S NK+ D ALV+ LK     SNFSMAF Y V+A EE M
Sbjct: 79  KVQQSVDLALVFIGRGLLSTDVSANKNTDPALVNLLK-----SNFSMAFSY-VAASEEAM 132

Query: 134 ESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQAD 193
           E+SL S F EAC  D +++NVAFSESC+VEGENF KLA+LH+++D+L  R EK   G  D
Sbjct: 133 ENSLVSGFAEACGQDLEISNVAFSESCSVEGENFQKLANLHAINDYLASRMEKRPSGHTD 192

Query: 194 LIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYV 253
           L+V CYG + SMK   QP+ E+                E+ SELI SVE  G KY+VLYV
Sbjct: 193 LVVFCYGGSNSMKGLDQPQSES----------------EIFSELISSVEMLGGKYSVLYV 236

Query: 254 SDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVS 313
           SDP RS+  P H+ELERFLAES AGN S N+T CDEVCQ KSSL EG+LVGIVLL+IL+S
Sbjct: 237 SDPFRSIHLPYHRELERFLAESAAGNASLNSTHCDEVCQIKSSLLEGVLVGIVLLIILIS 296

Query: 314 GLCCMMGIDTPTRFEAPQES 333
           GLCCMMGIDTPTRFEAPQ+S
Sbjct: 297 GLCCMMGIDTPTRFEAPQDS 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564784|ref|XP_002523386.1| conserved hypothetical protein [Ricinus communis] gi|223537336|gb|EEF38965.1| conserved hypothetical protein [Ricinus communis]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/313 (60%), Positives = 232/313 (74%), Gaps = 25/313 (7%)

Query: 25  STVPAFLWSTHHQKISSNN----ALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVD 80
           S+VPAF WS+H     SNN    A+NYQT+S +DLA+++L++GGW+++LCS ++  Q VD
Sbjct: 27  SSVPAFFWSSHQ---FSNNGMDEAVNYQTISSRDLARSILSEGGWSNILCSEKKLQQPVD 83

Query: 81  VALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSE 140
           +ALVFVGREL S+ IS  K AD ALV  LKV + +SNFSMAFPYI ++ EETME+SL S 
Sbjct: 84  LALVFVGRELLSTDISTRKSADPALVSLLKVLYGRSNFSMAFPYIAASEEETMENSLVSG 143

Query: 141 FTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYG 200
           F E+C  D  + NVAFSESC+VEGENF KLAD+H+VHDHL  R EK   GQADL+V C+G
Sbjct: 144 FVESCGQDLGINNVAFSESCSVEGENFEKLADVHAVHDHLVSRMEKRQNGQADLVVFCHG 203

Query: 201 DTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSV 260
              S K  +QP+ E+                E++SELI SVE  G KY VLYVSDP RS+
Sbjct: 204 -AHSAKGLEQPKSES----------------EILSELISSVETLGVKYEVLYVSDPFRSI 246

Query: 261 QYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMG 320
           QYPSH++L RFLAE   GN S N+T CDEVC+ KSSL EG+LVGIVLL+IL+SGLCCMMG
Sbjct: 247 QYPSHRDLRRFLAEGSIGNGSLNST-CDEVCKIKSSLLEGVLVGIVLLIILISGLCCMMG 305

Query: 321 IDTPTRFEAPQES 333
           IDTPTRFEAPQES
Sbjct: 306 IDTPTRFEAPQES 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538489|ref|XP_003537736.1| PREDICTED: uncharacterized protein LOC100808749 [Glycine max]

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/315 (55%), Positives = 232/315 (73%), Gaps = 20/315 (6%)

Query: 21  FASPSTVPAFLWSTHHQKISSNN---ALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQ 77
            A PSTVPAFLWS+H++  S N    ++NYQ +SPKDLAK+V ++ GW++ LC G++  +
Sbjct: 21  LAVPSTVPAFLWSSHYELASENGLKESVNYQVISPKDLAKSVFSEAGWSNFLCKGKKLHE 80

Query: 78  SVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSL 137
            +D+AL+FVGRELQSS ++ NKHAD AL+D LK+SF +SN S+AFPY+ ++ +  +E+SL
Sbjct: 81  PLDLALLFVGRELQSSDLNMNKHADSALLDLLKISFARSNTSVAFPYVSTSEDVLLENSL 140

Query: 138 FSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVV 197
            S F EAC  D  + NVAF  SC+++G N  ++  LHSV D+L  R E+S +G+ DL+V 
Sbjct: 141 ISGFAEAC-GDMGIGNVAFHGSCSMDGANHEEITTLHSVQDYLIKRMEESHRGKTDLVVF 199

Query: 198 CYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPV 257
           C   +Q++K   + + E                GEV+S LI SVE+SGAKY VLYVSDP 
Sbjct: 200 CNEGSQAVKNVDKTQSE----------------GEVLSNLISSVEESGAKYAVLYVSDPS 243

Query: 258 RSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCC 317
           RS+QYPS+++L+RFLAES AGN+S N+T CDEVCQ KSSL EGILVGIVLL+IL+SGLCC
Sbjct: 244 RSIQYPSYRDLQRFLAESTAGNESTNSTICDEVCQLKSSLLEGILVGIVLLIILISGLCC 303

Query: 318 MMGIDTPTRFEAPQE 332
           MMGIDTPTRFE PQE
Sbjct: 304 MMGIDTPTRFETPQE 318

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807267|ref|NP_001241625.1| uncharacterized protein LOC100783869 precursor [Glycine max] gi|255642930|gb|ACU22681.1| unknown [Glycine max]

 Score =  353 bits (905), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 173/315 (54%), Positives = 232/315 (73%), Gaps = 20/315 (6%)

Query: 21  FASPSTVPAFLWSTHHQKISSN---NALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQ 77
            A PSTVPAFLWS+H++  S N    ++NYQ +SPKDLAK++L++ GW++ LC G++  +
Sbjct: 20  LAVPSTVPAFLWSSHYELASENILKESVNYQVISPKDLAKSILSEAGWSNFLCKGKKFHE 79

Query: 78  SVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSL 137
            +D+AL+FVGRELQSS +S NKHA+ AL+D LK SF +SN S+AFPY+ ++ +  +E+SL
Sbjct: 80  PLDLALLFVGRELQSSDLSMNKHANSALLDLLKNSFARSNTSVAFPYVSTSEDVLLENSL 139

Query: 138 FSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVV 197
            S F EAC  D  + NVAF  SC+++  N  ++  LHSV D+L  R E+S +G+ DL+V 
Sbjct: 140 VSGFAEAC-GDMGIGNVAFHGSCSIDDANHEEITTLHSVQDYLTKRMEESHRGKTDLVVF 198

Query: 198 CYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPV 257
           C   +Q+++   + + E                GEV+S LI+SVE+SGAKY +LYVSDP 
Sbjct: 199 CNEGSQALENVDRTQSE----------------GEVLSNLINSVEESGAKYAILYVSDPS 242

Query: 258 RSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCC 317
           RS+QYPS+++L+RFLAES AGN+S N+T CDEVCQ KSSL EGILVGIVLL+IL+SGLCC
Sbjct: 243 RSIQYPSYRDLQRFLAESTAGNESTNSTICDEVCQIKSSLLEGILVGIVLLIILISGLCC 302

Query: 318 MMGIDTPTRFEAPQE 332
           MMGIDTPTRFE PQE
Sbjct: 303 MMGIDTPTRFETPQE 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503480|gb|AFK39806.1| unknown [Medicago truncatula]

 Score =  348 bits (892), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/323 (55%), Positives = 228/323 (70%), Gaps = 20/323 (6%)

Query: 13  LEVLSAIAFASPSTVPAFLWSTHHQKISSNN---ALNYQTLSPKDLAKAVLTQGGWADLL 69
           L + + + FA PSTVPAFLWS+H++ IS N    ++NYQ +SPKDLAK+VL++ GW++ L
Sbjct: 13  LFIPNGLVFAIPSTVPAFLWSSHYKLISDNGLKESVNYQVISPKDLAKSVLSEAGWSNFL 72

Query: 70  CSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAG 129
           C G++    +D+AL+FVG ELQSS +S NKHAD AL D LK SF +SN SMAFPY+ ++ 
Sbjct: 73  CKGKKFQDPLDLALLFVGGELQSSDLSLNKHADSALSDFLKDSFVRSNTSMAFPYVSASE 132

Query: 130 EETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLK 189
           +  +E SL S F EAC DD  + NVAF  SC++   N  +   LHSV  +L  R E+S K
Sbjct: 133 DVNLEDSLVSGFAEACGDDLGIGNVAFLGSCSMGTGNREETKALHSVQAYLTKRKEESHK 192

Query: 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYT 249
           G+ DL+V C G  Q+ K   + + E                GEV+SELI SVE+SGAKY 
Sbjct: 193 GKTDLVVFCNG-PQASKNVDRTQSE----------------GEVLSELISSVEESGAKYA 235

Query: 250 VLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLL 309
           VLYVSD  RS+QYPS+++L+RFLAES  GN S N+T CD VCQ KSSL EG+LVGIVLL+
Sbjct: 236 VLYVSDLSRSIQYPSYRDLQRFLAESTTGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLI 295

Query: 310 ILVSGLCCMMGIDTPTRFEAPQE 332
           IL+SGLCCMMGID+PTRFEAPQE
Sbjct: 296 ILISGLCCMMGIDSPTRFEAPQE 318

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357474137|ref|XP_003607353.1| hypothetical protein MTR_4g076880 [Medicago truncatula] gi|217074030|gb|ACJ85375.1| unknown [Medicago truncatula] gi|355508408|gb|AES89550.1| hypothetical protein MTR_4g076880 [Medicago truncatula] gi|388495302|gb|AFK35717.1| unknown [Medicago truncatula]

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/311 (54%), Positives = 217/311 (69%), Gaps = 20/311 (6%)

Query: 25  STVPAFLWSTHHQKISSNN---ALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDV 81
           +TVPAFLWS+H+  +S N    ++NYQ +S KDLAK+VL++ GW++ LC G++    +D+
Sbjct: 25  TTVPAFLWSSHYNLVSENGLKESVNYQVISLKDLAKSVLSEAGWSNFLCKGKKFQDPLDL 84

Query: 82  ALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEF 141
           AL+FVG ELQSS +S NKHAD AL   LK SF +SN SMAFPY+ ++ +  +E SL S F
Sbjct: 85  ALLFVGGELQSSDLSLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSGF 144

Query: 142 TEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGD 201
            EAC DD  + NVAF  SC++   N  + A L SV  +L  R E+S KG+ DL+V C G 
Sbjct: 145 AEACGDDLGIGNVAFLGSCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNG- 203

Query: 202 TQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQ 261
            Q+ K     + E                GEV+SELI SVE+SGAKY VLYVSD  RS+Q
Sbjct: 204 PQASKNVDSTKSE----------------GEVLSELISSVEESGAKYAVLYVSDISRSIQ 247

Query: 262 YPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGI 321
           YPS+++L+RFLAES  GN S N+T CD VCQ KSSL EG+LVGIVLL+IL+SGLCCMMGI
Sbjct: 248 YPSYRDLQRFLAESTTGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGI 307

Query: 322 DTPTRFEAPQE 332
           D+PTRFEAPQE
Sbjct: 308 DSPTRFEAPQE 318

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515595|gb|AFK45859.1| unknown [Lotus japonicus]

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 163/312 (52%), Positives = 220/312 (70%), Gaps = 19/312 (6%)

Query: 25  STVPAFLWSTHHQKISSNN---ALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDV 81
           STVPAFLWS+H+  +S N    ++NYQ +SPKDLAK+V ++ GW++ LC G +  + +D+
Sbjct: 24  STVPAFLWSSHYNLVSDNGLKESVNYQVISPKDLAKSVSSEAGWSNFLCKGNKFQEPLDL 83

Query: 82  ALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGEETMESSLFSEF 141
           AL+F+G ELQSS +S  + AD  L+D L++SF +SN SMAFPY+ ++ + ++E  L S F
Sbjct: 84  ALLFIGGELQSSDLSVYEQADSVLLDLLEISFARSNTSMAFPYVSASEDVSLEDLLVSGF 143

Query: 142 TEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGD 201
           TEAC DD  + N+A   SC+ +  N  +   LHSV D+L  R E+S  G+ DL++ C G 
Sbjct: 144 TEACGDDLGIGNIASLGSCSRDNTNHEQTGALHSVQDYLTKRKEESHSGKTDLVMFCNGH 203

Query: 202 TQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVRSVQ 261
           +Q++K   + + E                GEV+SELI SVE+SGAKY VLYVSDP RS +
Sbjct: 204 SQALKNVDRTQSE----------------GEVLSELIRSVEESGAKYAVLYVSDPSRSPK 247

Query: 262 YPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVGIVLLLILVSGLCCMMGI 321
           YPS++EL+RFLAES  GN+S+N T C+ VCQ  SSL EG++VGIVLL+IL+SGLCCMMGI
Sbjct: 248 YPSYRELQRFLAESTNGNESSNATICNPVCQLASSLLEGLIVGIVLLIILISGLCCMMGI 307

Query: 322 DTPTRFEAPQES 333
           DTPTRFE PQES
Sbjct: 308 DTPTRFETPQES 319

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
TAIR|locus:2092875	321	AT3G13410 "AT3G13410" [Arabido	0.927	0.962	0.459	5.2e-65
TAIR|locus:4515102682	131	AT1G55546 "AT1G55546" [Arabido	0.321	0.816	0.522	5.3e-24

TAIR|locus:2092875 AT3G13410 "AT3G13410" [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 152/331 (45%), Positives = 194/331 (58%)

Query:     7 VIRLLLLEVLSA--IAFASPSTVPAFLWSTHHQKISS--NNALNYQTLSPKDLAKAVLTQ 62
             V  L+ L V S   I  ASP+TVPAFLWS H Q  +   + A+NYQ +S KDL  +V TQ
Sbjct:     9 VALLVFLSVASLFEIGLASPNTVPAFLWSPHLQSANGELDEAVNYQVMSAKDLVGSVFTQ 68

Query:    63 GGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAF 122
             GGW++ LCS ++  Q VDVALVF+GREL SS +S  +++D ALV+TL   FT SNFS+AF
Sbjct:    69 GGWSNFLCSEKKLEQPVDVALVFIGRELLSSDVSSKRNSDPALVNTLNNLFTASNFSLAF 128

Query:   123 PYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRL 182
             PYI +  EE ME+ L S   EAC ++  V+N+ FS+SC VE     KL+DL S  DHL  
Sbjct:   129 PYIAAPEEERMENLLLSGLKEACPNNVGVSNIVFSDSCFVEDGTIQKLSDLQSFKDHLLA 188

Query:   183 RAEKSLKGQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVE 242
             R E   +G+ DL+V+C   ++S  Q  Q   E                 E   EL+ SVE
Sbjct:   189 RRETRKEGETDLVVLCSEGSESNSQAGQSHSER----------------ESFLELVSSVE 232

Query:   243 KSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEXXX 302
             +SG+KYT LYVSDP     Y + Q      A+  +  + A  TGCDE+C+FKSSL E   
Sbjct:   233 QSGSKYTALYVSDPYWYTSYKTLQRFLAETAKGNSTPEIA--TGCDELCKFKSSLLEGIL 290

Query:   303 XXXXXXXXXXXXXCCMMGIDTPTRFEAPQES 333
                          CCM GIDTPTRFE PQ+S
Sbjct:   291 VGIVFLLILISGLCCMAGIDTPTRFETPQDS 321

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:4515102682 AT1G55546 "AT1G55546" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 57/109 (52%), Positives = 75/109 (68%)

Query:     4 SYVVIRLLLLEVLSAIAF--ASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLT 61
             +Y    L++LE  S + F  ASPSTVPAFLWS H Q  +    +NYQ +S KDL  +V T
Sbjct:    21 NYYQYLLVVLEFASLVDFGLASPSTVPAFLWSPHLQYANGETDVNYQVMSAKDLVDSVFT 80

Query:    62 QGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLK 110
              GGW++ LCS ++  Q VDVALVF+GREL SS +S N+++D  LV+TLK
Sbjct:    81 LGGWSNFLCSEKKLQQPVDVALVFIGRELLSSDVSSNQNSDPVLVNTLK 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      333       317   0.00083  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  229 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.18u 0.10s 25.28t   Elapsed:  00:00:02
  Total cpu time:  25.18u 0.10s 25.28t   Elapsed:  00:00:02
  Start:  Fri May 10 16:19:06 2013   End:  Fri May 10 16:19:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	333
PF05827	282	ATP-synt_S1: Vacuolar ATP synthase subunit S1 (ATP	100.0
KOG3868	411	consensus Vacuolar H+-ATPase V0 sector, accessory	98.51

>PF05827 ATP-synt_S1: Vacuolar ATP synthase subunit S1 (ATP6S1); InterPro: IPR024722 This family consists of metazoan vacuolar ATP synthase subunit S1 proteins [] and fungal proteins belonging to the BIG family

Probab=100.00  E-value=8.9e-38  Score=296.25  Aligned_cols=236  Identities=23%  Similarity=0.233  Sum_probs=177.0

Q ss_pred             CcceEEeecCC-cCCC-CcccccccCCChhhHHHHHHhhCCCccccccCCCCCCCCcEEEEEEcCCCCccccCCCCC-CC
Q 019942           26 TVPAFLWSTHH-QKIS-SNNALNYQTLSPKDLAKAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKH-AD  102 (333)
Q Consensus        26 tvPa~lWSs~~-~~l~-s~~~~~yq~~s~~sl~~svl~~~~~s~~lc~~~~~~c~sd~yllf~Qp~L~ssD~s~~k~-~~  102 (333)
                      +||+||||++. .++- .....+-+.++..++...+.           ..+.+||+|+||++.|||||++||+..+. .+
T Consensus         1 t~P~~l~St~~~~~l~~~~~~~~~~~~s~~~~~~~~~-----------~~l~~cpsd~yl~v~Qpgl~~~Df~~~~~~~~   69 (282)
T PF05827_consen    1 TVPFFLFSTKLSPGLPPSIPPSSGQIQSSSSFLSYLK-----------SLLSSCPSDAYLFVNQPGLSASDFTDYGSSAF   69 (282)
T ss_pred             CCCEEEEECCCcccccccCCCCcCcCccHHHHHHHHH-----------HHHhcCCCceEEEEecccccHhhccccccCcc
Confidence            69999999992 1111 12223456667777775443           44679999999999999999999998764 68


Q ss_pred             hHHHHHHhhccccceeeEEeceee-cccchhhHHHHHHHHHHhccccceeceeeecCCccccccchhhhhccchhhhHHh
Q 019942          103 LALVDTLKVSFTKSNFSMAFPYIV-SAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLR  181 (333)
Q Consensus       103 p~L~~~L~~s~~~s~sS~~~P~V~-~~~~~~~~~sL~~~l~~~C~~~~~~~~V~~~~~~~~~~~~~~~l~~~~~v~~yi~  181 (333)
                      |+|++++..    +.+++.+|+|. ++.+   .+.|.+|++++|++....  |+.++.-.               ..   
T Consensus        70 p~L~~~~~~----s~s~~~~~~v~~~~~~---~~~L~~~l~~~c~~~~~~--v~~~~~~~---------------~~---  122 (282)
T PF05827_consen   70 PNLRRYLYS----SSSSLVLPAVESGWLD---LSQLAEYLKEKCGASVVI--VDVSDLSE---------------DS---  122 (282)
T ss_pred             hHHHHHHhc----CCcceeeeeEecCccC---HHHHHHHHHHHhCcCceE--EecCcccc---------------cc---
Confidence            999999965    77889999998 7888   889999999999987666  66654311               11   


Q ss_pred             HhHhhhcCCCceEEEEe-cCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecCCC--
Q 019942          182 LRAEKSLKGQADLIVVC-YGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVR--  258 (333)
Q Consensus       182 ~~~~~~~~~~~~livv~-~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P~~--  258 (333)
                           ..+.+++||+|+ ++.+.    ....|.|           +|.+||++|+++++.+++.+ +|||||||+|..  
T Consensus       123 -----~~~~~~~vi~V~l~~l~~----~~~~R~~-----------~L~~nD~~l~~vl~~l~s~~-~ytvIyts~~ps~v  181 (282)
T PF05827_consen  123 -----FEEYKPRVIRVDLPPLPS----SSESRKE-----------ALSDNDEFLRKVLSKLPSPD-PYTVIYTSTPPSRV  181 (282)
T ss_pred             -----ccccCCcEEEEECCCCCC----ccccchh-----------hhhhhhHHHHHHHHhcCCCC-cEEEEEEccCcccc
Confidence                 113489999999 54552    2378999           99999999999999999544 599999999811  


Q ss_pred             ------------------CCCCCcchhhh-----------------Hhhhhhcc--CCCCCC-CCCCcccccch-hhhHH
Q 019942          259 ------------------SVQYPSHQELE-----------------RFLAESVA--GNKSAN-NTGCDEVCQFK-SSLFE  299 (333)
Q Consensus       259 ------------------~~~~p~h~~Lk-----------------R~la~~~~--~~~s~~-~~~~f~~yQ~~-p~i~~  299 (333)
                                        .++.+.|+||+                 |.+..+..  .+.+.+ .+.+|++|||| |||||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~yQFftpgi~m  261 (282)
T PF05827_consen  182 HPREDSSSEFEIFEDIFNDFSRPVEMDLKNAGSRCSSENDPNVNPYRSFNSHDPKPSNSPDNEWDILFFDYQFFTPGIWM  261 (282)
T ss_pred             cccccCCCCcccchhhhcccchhhhhhhhhhhhhhhhcccccccccccccccccccCCCCcccccceehhheeeeccHHH
Confidence                              12345678888                 22211111  111211 14599999999 99999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhC
Q 019942          300 GILVGIVLLLILVSGLCCMMG  320 (333)
Q Consensus       300 gllv~~~ll~il~~Gl~~l~~  320 (333)
                      |++++++|+.||++||.||+|
T Consensus       262 glii~~~ll~IL~~gl~~l~S  282 (282)
T PF05827_consen  262 GLIISLVLLSILYVGLSMLMS  282 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999986

In Candida albicans BIG is required for normal beta-1,6-glucan synthesis, hyphal morphogenesis, adhesion and virulence [].

>KOG3868 consensus Vacuolar H+-ATPase V0 sector, accessory subunit S1 (Ac45) [Energy production and conversion]

Probab=98.51  E-value=7.9e-08  Score=95.41  Aligned_cols=41  Identities=34%  Similarity=0.610  Sum_probs=39.4

Q ss_pred             cch-hhhHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCCCCC
Q 019942          292 QFK-SSLFEGILVGIVLLLILVSGLCCMMGIDTPTRFEAPQE  332 (333)
Q Consensus       292 Q~~-p~i~~gllv~~~ll~il~~Gl~~l~~l~~p~rfe~pk~  332 (333)
                      -|| |||+|||+++++||.||..|+++|.+|++++|||+||+
T Consensus       361 gffSpgilmGLfvvliLl~IL~~Gl~mllsi~tmdrfdd~k~  402 (411)
T KOG3868|consen  361 GFFSPGILMGLFVVLILLAILWYGLHMLLSIGTMDRFDDPKG  402 (411)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhccCcCC
Confidence            467 99999999999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	333
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	80.76

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.76  E-value=0.69  Score=36.98  Aligned_cols=54  Identities=22%  Similarity=0.447  Sum_probs=45.2

Q ss_pred             CceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecCCC
Q 019942          191 QADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPVR  258 (333)
Q Consensus       191 ~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P~~  258 (333)
                      ..|+|+++.+-+.   ..+++|.+           .+..|-++++++...+.+.+++-.+|.+|.|..
T Consensus        69 ~aDvvvitaG~~~---k~g~~R~d-----------l~~~N~~i~~~v~~~i~~~~p~aivivvtNPvD  122 (145)
T d2cmda1          69 GADVVLISAGVRR---KPGMDRSD-----------LFNVNAGIVKNLVQQVAKTCPKACIGIITNPVN  122 (145)
T ss_dssp             TCSEEEECCSCCC---CTTCCGGG-----------GHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred             CCCEEEECCCccC---CCCcchhh-----------HHHHHHHHHHHHHHHHHhhCCCcEEEEccCCch
Confidence            5689999943331   25578999           999999999999999988899999999999954