Citrus Sinensis ID: 019984

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
Protein Sequence
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEHHHHHHHHHHHHHHHHHHEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEcccEEccccHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccHHHHHHHHHHEEEHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEkimrvpygadneyFKYSLFLVFCNRLMTSAVSAGTLIasrkaidpvapVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIfilfpsgadlspyskgrentVWGVSLMVGYlgfdgftstfqdklfkgydmeiHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCvwfrhplsweqCIGSIIVFGALYTRSFFKkvsekprpsehpmenmhngasslmkgssprggep
Flexible Loop (DISEMBL)
MAETLITAigvkdsrvLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTliasrkaidpVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSekprpsehpmenmhngasslmkgssprggep
Low Complexity Region (SEG)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Disordered region (IsUnstruct)
****LITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK**********************************
Disordered Region (DISOPRED)
****************LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIF*******************VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR**************************************
Disordered Region (DISEMBL)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK*************NMHNGAS*************
Disordered Region (DISPRO)
***********KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG*********RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV********************************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMKGSSPRGGEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	333	2.2.26 [Sep-21-2011]
Q6NMB6	344	UDP-galactose/UDP-glucose	yes	no	0.933	0.904	0.708	1e-139
Q6NM25	347	UDP-galactose/UDP-glucose	no	no	0.873	0.838	0.728	1e-131
Q55DM5	359	Adenosine 3'-phospho 5'-p	yes	no	0.843	0.782	0.421	9e-58
Q91ZN5	431	Adenosine 3'-phospho 5'-p	no	no	0.927	0.716	0.337	5e-40
Q8TB61	432	Adenosine 3'-phospho 5'-p	yes	no	0.885	0.682	0.320	5e-37
Q5R9A1	432	Adenosine 3'-phospho 5'-p	yes	no	0.885	0.682	0.320	5e-37
Q9VEI3	465	Adenosine 3'-phospho 5'-p	yes	no	0.873	0.625	0.311	1e-32
Q8MXJ9	425	Adenosine 3'-phospho 5'-p	yes	no	0.858	0.672	0.327	8e-31
Q6C4X5	365	UDP-galactose transporter	yes	no	0.849	0.775	0.274	2e-23
Q8AXS6	323	Solute carrier family 35	yes	no	0.849	0.876	0.273	6e-17

>sp|Q6NMB6|UTR5B_ARATH UDP-galactose/UDP-glucose transporter 5B OS=Arabidopsis thaliana GN=At5g59740 PE=2 SV=1

 Score =  495 bits (1274), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/336 (70%), Positives = 276/336 (82%), Gaps = 25/336 (7%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------- 106
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYE              
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 107 --------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158
                   +WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 218
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 279 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 311
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM25|UTR5_ARATH UDP-galactose/UDP-glucose transporter 5 OS=Arabidopsis thaliana GN=UTR5 PE=2 SV=1

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/313 (72%), Positives = 262/313 (83%), Gaps = 22/313 (7%)

Query: 20  IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK 79
           +FA+SGIM TLVIYG+LQEKIMRVPYG   EYFK+SLFLVFCNRL TSAVSA  L+AS+K
Sbjct: 21  VFAISGIMLTLVIYGLLQEKIMRVPYGLKKEYFKHSLFLVFCNRLTTSAVSAAALLASKK 80

Query: 80  AIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWGTLIMQKRY 117
            +DPVAPVYKYCL+S++NILTTTCQYE                      +WGTLIMQK+Y
Sbjct: 81  VLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKY 140

Query: 118 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 177
           +G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLGFDGFTSTFQDK
Sbjct: 141 RGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDK 200

Query: 178 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT 237
           LFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC FD+ALLSTVAT 
Sbjct: 201 LFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATA 260

Query: 238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF 297
           SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLSWEQCIGS+IVFG+LY ++F
Sbjct: 261 SQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKTF 320

Query: 298 FKKVSEKPRPSEH 310
            KK SEKP  ++ 
Sbjct: 321 VKKKSEKPPAAQE 333

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q55DM5|S35B2_DICDI Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Dictyostelium discoideum GN=slc35b2 PE=3 SV=1

 Score =  224 bits (570), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 182/311 (58%), Gaps = 30/311 (9%)

Query: 11  VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPY-GAD--NEYFKYSLFLVFCNRLMTS 67
           V+ S  +K+  A  GIM + ++YGILQE++M VPY  AD   EYF  S FLV  NR+  +
Sbjct: 21  VQLSYNMKLALATGGIMGSFLLYGILQERLMVVPYKNADGSEEYFTDSTFLVLSNRVFAA 80

Query: 68  AVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE--------------------- 106
            ++   ++   +++  VAP++KY  V++SN   T CQYE                     
Sbjct: 81  LMAIVIVLKRGESLKNVAPLHKYVGVALSNFCATWCQYEALKYVNFPTQTLGKCGKMLPV 140

Query: 107 -IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYL 165
            + GT I  K+Y   DY +AL +T GC IF L    ++         NT +G+ LM  Y+
Sbjct: 141 MLVGTFISGKKYGLKDYSIALTITTGCMIFFLTGKISN-----NESSNTSYGIILMALYM 195

Query: 166 GFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF 225
            FD FTSTFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL G LF AI+F+  H   F
Sbjct: 196 FFDSFTSTFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILNGRLFPAIEFISTHNGVF 255

Query: 226 FDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGS 285
           FD  +LS  A   Q  I YTI+ FGAL F+TIM TRQ+VSI+LS + + HPLS  Q IG+
Sbjct: 256 FDSTMLSASAGLGQMVIYYTIKEFGALVFSTIMVTRQMVSIILSTLIYLHPLSNTQWIGA 315

Query: 286 IIVFGALYTRS 296
           ++VFG LY +S
Sbjct: 316 LLVFGTLYYKS 326

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q91ZN5|S35B2_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Mus musculus GN=Slc35b2 PE=2 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 35/344 (10%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSL 56
           +A    TA      +VLK++F  SG+  + + +GILQE++M   YGA      E+F  S 
Sbjct: 94  LAPRTETAESTPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQ 153

Query: 57  FLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE---------- 106
           FLV  NR++ + V AG     RK     AP+Y+Y   S+SN+L++ CQYE          
Sbjct: 154 FLVLMNRVL-ALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQ 212

Query: 107 ------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT 154
                       + G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T
Sbjct: 213 VLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSS-PATT 268

Query: 155 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLA 214
           + G+ L+ GY+ FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L   
Sbjct: 269 LSGLVLLAGYIAFDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEG 327

Query: 215 IDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFR 274
             F+  H +      LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + 
Sbjct: 328 ARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYG 387

Query: 275 HPLSWEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENM 315
           H ++    +G  +VF AL  R +    K+  +K  P+E P++ +
Sbjct: 388 HTVTVVGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Mus musculus (taxid: 10090)

>sp|Q8TB61|S35B2_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Homo sapiens GN=SLC35B2 PE=1 SV=1

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 170/331 (51%), Gaps = 36/331 (10%)

Query: 15  RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSLFLVFCNRLMTSAVS 70
           + LK++F  +G+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V+
Sbjct: 108 QALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVA 167

Query: 71  AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IW 108
             + +  ++     AP+Y+Y   S+SN+L++ CQYE                      + 
Sbjct: 168 GLSCVLCKQPRHG-APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLM 226

Query: 109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
           G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct: 227 GKLVSRRSYEHWEYLTATLISIGVSMFLL-SSGPE--PRSSP-ATTLSGLILLAGYIAFD 282

Query: 169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
            FTS +QD LF  Y M     +F     SC+ ++  L+ +G L     F+  H +     
Sbjct: 283 SFTSNWQDALF-AYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHA 341

Query: 229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
            LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  +V
Sbjct: 342 LLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVV 401

Query: 289 FGAL----YTRSFFKKVSEKPRPSEHPMENM 315
           F AL    Y R   K+  +K  P E P++ +
Sbjct: 402 FAALLLRVYARGRLKQRGKKAVPVESPVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.

Homo sapiens (taxid: 9606)

>sp|Q5R9A1|S35B2_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Pongo abelii GN=SLC35B2 PE=2 SV=2

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 170/331 (51%), Gaps = 36/331 (10%)

Query: 15  RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGA----DNEYFKYSLFLVFCNRLMTSAVS 70
           + LK++F  +G+  + + +G+LQE++M   YGA      E F  S FLV  NR++   V+
Sbjct: 108 QALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVA 167

Query: 71  AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IW 108
             + +  ++     AP+Y+Y   S+SN+L++ CQYE                      + 
Sbjct: 168 GLSCVLCKQPRHG-APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKVSKVIPVMLM 226

Query: 109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
           G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct: 227 GKLVSRRSYEHWEYLTATLISIGVSMFLL-SSGPE--PRSSP-ATTLSGLILLAGYIAFD 282

Query: 169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
            FTS +QD LF  Y M     +F     SC+ ++  L+ +G L     F+  H +     
Sbjct: 283 SFTSNWQDALF-AYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHA 341

Query: 229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
            LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  +V
Sbjct: 342 LLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVV 401

Query: 289 FGAL----YTRSFFKKVSEKPRPSEHPMENM 315
           F AL    Y R   K+  +K  P E P++ +
Sbjct: 402 FAALLLRVYARGRLKQRGKKAVPVESPVQKV 432

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9VEI3|S35B2_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Drosophila melanogaster GN=sll PE=1 SV=1

 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 36/327 (11%)

Query: 13  DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPY---GADNEYFKYSLFLVFCNRLMTSAV 69
               +++++   G+M + + +G+LQEKIM   Y     ++  FK S FLVF NRL+   V
Sbjct: 139 SQEAVQLLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLV 198

Query: 70  SAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------I 107
           +   L      +   AP+YKY   S SNI++   QYE                      +
Sbjct: 199 ALAYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVML 258

Query: 108 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGF 167
            G ++ + +Y+ Y+Y  ALL++LG    I F SG+  S  + G   T+ G+ L+  Y+ F
Sbjct: 259 MGKIMSKAKYESYEYVTALLISLG---MIFFMSGSSDSSKASG-VTTLTGIFLLSMYMVF 314

Query: 168 DGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFD 227
           D FT+ +Q  LFK Y M     +    L S + + + L ++G    ++ F   H    FD
Sbjct: 315 DSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFD 374

Query: 228 VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSII 287
           + +LS  +   Q FI +TI  FG + F  IMT RQ V+I+LSC  ++H +S     G +I
Sbjct: 375 MVVLSVCSAVGQLFIYHTIDVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLI 434

Query: 288 VFGALYTRSF-------FKKVSEKPRP 307
           VF A++ R +        +K +E  +P
Sbjct: 435 VFVAIFLRVYCTQRLRAIRKRAEANKP 461

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Required for the dorsoventral patterning, suggesting that it mediates the transport of the sulfate donor required for the sulfotransferase activity of pip (pipe).

Drosophila melanogaster (taxid: 7227)

>sp|Q8MXJ9|S35B2_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 1 OS=Caenorhabditis elegans GN=pst-1 PE=3 SV=4

 Score =  134 bits (337), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 157/330 (47%), Gaps = 44/330 (13%)

Query: 16  VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEY-----FKYSLFLVFCNRLMTSAVS 70
           ++ ++F  SGI  TLV  G+LQE+I+   Y   ++      F  + FL+FCNR++   +S
Sbjct: 103 IILLLFFFSGIQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRIVALVLS 162

Query: 71  AGTLIASRKAIDP-VAPVYKYCLVSMSNILTTTCQYE----------------------I 107
              L        P V P+Y +   S SN +++ CQYE                      +
Sbjct: 163 LMILAKDWTKQPPHVPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQTICKASKVVVTML 222

Query: 108 WGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYS-KGRENTVW-----GVSLM 161
            G L+  +RY  ++Y        GC   I F +   L   S KG  +T+      G+ LM
Sbjct: 223 MGRLVRGQRYSWFEY--------GCGCTIAFGASLFLLSSSSKGAGSTITYTSFSGMILM 274

Query: 162 VGYLGFDGFTSTFQDKLFKGY-DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH 220
            GYL FD FT  +Q  LF     +  +  +F     S +L    LI +G L+ +I F   
Sbjct: 275 AGYLLFDAFTLNWQKALFDTKPKVSKYQMMFGVNFFSAILCAVSLIEQGTLWSSIKFGAE 334

Query: 221 HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWE 280
           H+D   DV LLS      Q FI  TI  FG + FA IMT RQ++SIVLS + + H L++ 
Sbjct: 335 HVDFSRDVFLLSLSGAIGQIFIYSTIERFGPIVFAVIMTIRQMLSIVLSTIMYGHELTFL 394

Query: 281 QCIGSIIVFGALYTRSFFKKVSEKPRPSEH 310
             IG +IVF A++     KK S+K R  + 
Sbjct: 395 AAIGFMIVFAAIFV-DIHKKYSDKSRGPQR 423

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q6C4X5|HUT1_YARLI UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 38/321 (11%)

Query: 16  VLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTL- 74
           ++ +I  VSGI  + + + +LQE+I   PYG DN+ F+ SL +      + +AV    L 
Sbjct: 42  IIDLIICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVINTVQSFLAAAVGYAYLQ 101

Query: 75  -IASRKA----------IDPVAPVYKYCLVSMSNILT-----TTCQYEIWGTLIMQK--- 115
              SR+A           D +  + +  LV++S  L      T  +Y  + T I+ K   
Sbjct: 102 YKQSRRAAKGLKKNTTVFDSMYTLKQLSLVALSQSLASPLSYTALKYVDYLTSILAKSCK 161

Query: 116 --------------RYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLM 161
                         ++  Y Y + +LVT+G S+F +F   A       G E+ ++G+ L+
Sbjct: 162 LIPLMALQVTLYRRKFPAYKYAVVVLVTIGVSMFTIF-HAAPKKASGAGSEHQLYGLGLL 220

Query: 162 VGYLGFDGFTSTFQDKLF-KGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFV 218
              +  DG T++ QD++F K  D+   + +    L + V +   L+      L  AI F+
Sbjct: 221 GISMLLDGLTNSTQDQIFRKNADITGPHVMCGLNLLTGVFTTVSLLTFSRPQLDTAIAFI 280

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
             H +   D+ L        Q FI  T+  FG++   T+  TR++ S++LS VWF H L+
Sbjct: 281 RLHPEIMRDIVLFGLCGAVGQVFIFQTLEKFGSVVLVTVNVTRKMFSMLLSVVWFNHRLT 340

Query: 279 WEQCIGSIIVFGALYTRSFFK 299
             Q  G   VFG +   ++ K
Sbjct: 341 LGQWAGVAAVFGGIGFEAWMK 361

May be involved in specific transport of UDP-Gal from the cytosol to the Golgi lumen. Involved in the maintenance of optimal conditions for the folding of secretory pathway proteins in the endoplasmic reticulum.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q8AXS6|S35B1_XENTR Solute carrier family 35 member B1 OS=Xenopus tropicalis GN=slc35b1 PE=2 SV=2

 Score = 88.6 bits (218), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 31/314 (9%)

Query: 18  KMIFAVSGIMTTLVIYGILQEKIMRVPYGA--DNEYFKYSLFLVFCNRLMTSAVSAGTLI 75
           +++    G+      YGILQE I R  YG     E F+++L LVF  + + +A+ A  LI
Sbjct: 13  RLLVCFLGVFVCYFYYGILQETITRGTYGEGEKQEKFRFALSLVFV-QCIVNALFAKLLI 71

Query: 76  A---SRKAIDPVAPVYKYCLVSM-----------------SNILTTTCQ---YEIWGTLI 112
               S K     + +Y  C +S                  + +L  +C+     + G  +
Sbjct: 72  QFFDSGKTDRTQSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTL 131

Query: 113 MQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTV-WGVSLMVGYLGFDGFT 171
           ++K+Y    Y   LL+ LG ++F+  P        S G E+T  +G  L++  L  DG T
Sbjct: 132 LRKKYPLSKYLCVLLIVLGVALFMYKPKNTG----SGGDEHTFGYGELLLLLSLTLDGLT 187

Query: 172 STFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL 231
              QD +   +    ++ + Y  L S +   +G++  G L+  + F   +    +++ L 
Sbjct: 188 GVSQDHMRAHFQTGSNHMMLYINLWSSLFLGAGIVFTGELWDFLSFTERYPSIVYNIMLF 247

Query: 232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGA 291
           S  +   Q FI  T+  FG LT + I TTR+  +I+ S + F +P+S  Q +G+I+VF  
Sbjct: 248 SLTSALGQTFIFMTVVYFGPLTCSIITTTRKFFTILASVILFSNPISSIQWVGTILVFLG 307

Query: 292 LYTRSFFKKVSEKP 305
           L   + + K S+KP
Sbjct: 308 LGLDATYGKGSKKP 321

Probable sugar transporter.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
255580568	349	Adenosine 3'-phospho 5'-phosphosulfate t	0.945	0.902	0.717	1e-143
225435088	344	PREDICTED: adenosine 3'-phospho 5'-phosp	0.897	0.869	0.747	1e-140
297796921	344	hypothetical protein ARALYDRAFT_332244 [	0.954	0.924	0.696	1e-138
224054863	347	predicted protein [Populus trichocarpa]	0.948	0.910	0.723	1e-138
51969060	344	unnamed protein product [Arabidopsis tha	0.933	0.904	0.708	1e-137
15238511	344	UDP-N-acetylglucosamine (UAA) transporte	0.933	0.904	0.708	1e-137
356557455	351	PREDICTED: adenosine 3'-phospho 5'-phosp	0.891	0.846	0.727	1e-136
449460973	361	PREDICTED: UDP-galactose/UDP-glucose tra	0.909	0.839	0.704	1e-135
356547228	352	PREDICTED: adenosine 3'-phospho 5'-phosp	0.927	0.877	0.706	1e-135
356542497	353	PREDICTED: adenosine 3'-phospho 5'-phosp	0.930	0.878	0.689	1e-135

>gi|255580568|ref|XP_002531108.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223529304|gb|EEF31273.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/340 (71%), Positives = 285/340 (83%), Gaps = 25/340 (7%)

Query: 7   TAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMT 66
           +++GVKD+++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FKYSLFLVFCNR+ T
Sbjct: 10  SSVGVKDNKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKYSLFLVFCNRITT 69

Query: 67  SAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------------- 106
           SAVSA  L+AS+KA++PVAP+YKYCL+S+SNILTTTCQYE                    
Sbjct: 70  SAVSAAVLLASKKALNPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIP 129

Query: 107 --IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGY 164
             IWGT+IMQKRYKG DY LA LVTLGCS+FILFP+G D+SPYS+GRENTVWGVSLM+GY
Sbjct: 130 VMIWGTVIMQKRYKGMDYLLAFLVTLGCSVFILFPAGTDISPYSRGRENTVWGVSLMLGY 189

Query: 165 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDC 224
           LGFDGFTSTFQDKLFKGYDMEIHNQIFYTT+CSC+LS +GL+++GHL  AIDFVY H DC
Sbjct: 190 LGFDGFTSTFQDKLFKGYDMEIHNQIFYTTVCSCILSFTGLLIQGHLLPAIDFVYRHNDC 249

Query: 225 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIG 284
           FFD+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQLVSI+LSCVWF HPLSWEQ IG
Sbjct: 250 FFDIALLSTVATGSQFFISYTIRTFGALTFAAIMTTRQLVSIMLSCVWFSHPLSWEQWIG 309

Query: 285 SIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMK 324
           ++IVFG+LY ++F K  S +P PSE   E+  NGAS+  K
Sbjct: 310 AVIVFGSLYAKNFLKGGSPRPPPSE---EHTENGASTPTK 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435088|ref|XP_002281454.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Vitis vinifera] gi|297746141|emb|CBI16197.3| unnamed protein product [Vitis vinifera]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/321 (74%), Positives = 270/321 (84%), Gaps = 22/321 (6%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           K++R  K + AV GIMTTLVIYG+LQEKIMRVPYGAD EYFKYSLFLVFCNR+ TSAVSA
Sbjct: 11  KENRFWKGVLAVVGIMTTLVIYGVLQEKIMRVPYGADKEYFKYSLFLVFCNRITTSAVSA 70

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWG 109
           G L+AS+KA+DPVAPVYKYCL+S+SNILTTTCQYE                      +WG
Sbjct: 71  GALLASKKALDPVAPVYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 130

Query: 110 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 169
           TLIMQKRY+G DY LA LVT+GCS FIL+P  +D+SPYSKGRENTVWGVSLM+GYLGFDG
Sbjct: 131 TLIMQKRYRGPDYLLAFLVTVGCSFFILYPVASDISPYSKGRENTVWGVSLMMGYLGFDG 190

Query: 170 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 229
           FTSTFQDKLF+GY+MEIHNQIFYTTLCSC+LSL+GLI +GHL LAIDFV  H DCFFD+ 
Sbjct: 191 FTSTFQDKLFRGYNMEIHNQIFYTTLCSCILSLAGLIFQGHLPLAIDFVRRHNDCFFDIV 250

Query: 230 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 289
           LLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSW+Q IG+IIVF
Sbjct: 251 LLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWQQWIGAIIVF 310

Query: 290 GALYTRSFFKKVSEKPRPSEH 310
           G+LY +SF K + +KP PSE 
Sbjct: 311 GSLYAKSFLKSMPQKPSPSEE 331

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796921|ref|XP_002866345.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata] gi|297312180|gb|EFH42604.1| hypothetical protein ARALYDRAFT_332244 [Arabidopsis lyrata subsp. lyrata]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/343 (69%), Positives = 274/343 (79%), Gaps = 25/343 (7%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE      GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + +YFK+SLFLVF
Sbjct: 1   MAEPETVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKDYFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------- 106
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYE              
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 107 --------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158
                   +WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 218
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  AIDFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLSAIDFV 240

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 279 WEQCIGSIIVFGALYTRSFF---KKVSEKPRPSEHPMENMHNG 318
           WEQCIGS+IVFG+LY ++     KK   +P P E P      G
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKKSQTQPPPPELPQYEKAEG 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054863|ref|XP_002298378.1| predicted protein [Populus trichocarpa] gi|222845636|gb|EEE83183.1| predicted protein [Populus trichocarpa]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/343 (72%), Positives = 287/343 (83%), Gaps = 27/343 (7%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MA++L++  GVK++++ K + AV+GIMTTLVIYG+LQEKIMRVPYG++ E+FKYSLFLVF
Sbjct: 1   MADSLLSG-GVKENKLWKGVLAVAGIMTTLVIYGLLQEKIMRVPYGSNKEFFKYSLFLVF 59

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------- 106
           CNR+ TSAVSA  L+AS+KA++PVAPV+KYCL+S+SNILTTTCQYE              
Sbjct: 60  CNRITTSAVSAAALVASKKALNPVAPVHKYCLISVSNILTTTCQYEALKYVSFPVQTLAK 119

Query: 107 --------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158
                   +WGT+IMQKRYKG DYFLALLVTLGCSIFILFP+G ++SPYS+GRENTVWGV
Sbjct: 120 CAKMIPVMVWGTIIMQKRYKGMDYFLALLVTLGCSIFILFPAGTEISPYSRGRENTVWGV 179

Query: 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 218
           SLM+GYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSC+LSL+GL+L+GHL  AIDFV
Sbjct: 180 SLMLGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCILSLTGLVLQGHLLPAIDFV 239

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
           + H DCFFD+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQLVSIVLSCVWF HPLS
Sbjct: 240 FRHNDCFFDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLVSIVLSCVWFAHPLS 299

Query: 279 WEQCIGSIIVFGALYTRSFFKKVSEKPRPSEHPMENMHNGASS 321
           WEQ IG++IVFG+LY R+  K    K  PSEH      NGASS
Sbjct: 300 WEQWIGAVIVFGSLYARNLLKSTPSKLPPSEH----TQNGASS 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51969060|dbj|BAD43222.1| unnamed protein product [Arabidopsis thaliana] gi|51969064|dbj|BAD43224.1| unnamed protein product [Arabidopsis thaliana]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/336 (70%), Positives = 276/336 (82%), Gaps = 25/336 (7%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------- 106
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYE              
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 107 --------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158
                   +WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 218
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 279 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 311
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNSKKNSQTQPPPPELP 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238511|ref|NP_200782.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana] gi|75127032|sp|Q6NMB6.1|UTR5B_ARATH RecName: Full=UDP-galactose/UDP-glucose transporter 5B; Short=AtUTr5B gi|44917565|gb|AAS49107.1| At5g59740 [Arabidopsis thaliana] gi|332009843|gb|AED97226.1| UDP-N-acetylglucosamine (UAA) transporter family protein [Arabidopsis thaliana]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/336 (70%), Positives = 276/336 (82%), Gaps = 25/336 (7%)

Query: 1   MAETLITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVF 60
           MAE  +   GVK++++ K +FAVSGIM+TLVIYG+LQEKIMRVPYG + E+FK+SLFLVF
Sbjct: 1   MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVF 60

Query: 61  CNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE-------------- 106
           CNRL TSAVSAG L+AS+K +DPVAPVYKYCL+S++NILTTTCQYE              
Sbjct: 61  CNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAK 120

Query: 107 --------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV 158
                   +WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGV
Sbjct: 121 CAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGV 180

Query: 159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFV 218
           SLM GYLGFDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV
Sbjct: 181 SLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFV 240

Query: 219 YHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
             H DC  D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLS
Sbjct: 241 SLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLS 300

Query: 279 WEQCIGSIIVFGALYTRSFF--KKVSE-KPRPSEHP 311
           WEQCIGS+IVFG+LY ++    KK S+ +P P E P
Sbjct: 301 WEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELP 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557455|ref|XP_003547031.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/319 (72%), Positives = 271/319 (84%), Gaps = 22/319 (6%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           +D++  K  FAV+GIM TLV YG+LQEKIMRVPYGA+ EYFK+SLFLVFCNR+ TSAVSA
Sbjct: 17  RDNKFWKGAFAVAGIMLTLVTYGVLQEKIMRVPYGAEKEYFKHSLFLVFCNRITTSAVSA 76

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWG 109
            +L+AS+KA+DPVAP+YKYCL+S+SNILTTTCQYE                      +WG
Sbjct: 77  CSLLASKKAMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKTIPVMVWG 136

Query: 110 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 169
            LIMQKRY+G DY LA L+TLGCS+FIL+P+GAD+SPYS+GRENTVWGV LMVGYLGFDG
Sbjct: 137 ALIMQKRYQGPDYLLAFLITLGCSVFILYPAGADMSPYSRGRENTVWGVLLMVGYLGFDG 196

Query: 170 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 229
           FTSTFQDKLF+GYDMEIHNQIFYTTLCSC+LSL+GLIL+GHL  A++FVY+H DCFFD+A
Sbjct: 197 FTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAVEFVYNHHDCFFDIA 256

Query: 230 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 289
           LLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ IG++IVF
Sbjct: 257 LLSTVATVSQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVF 316

Query: 290 GALYTRSFFKKVSEKPRPS 308
           G+LY +SF +K+ +K   S
Sbjct: 317 GSLYGKSFSRKMPQKTTSS 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460973|ref|XP_004148218.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus] gi|449527659|ref|XP_004170827.1| PREDICTED: UDP-galactose/UDP-glucose transporter 5B-like [Cucumis sativus]

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/325 (70%), Positives = 274/325 (84%), Gaps = 22/325 (6%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           KD+++ K +FAV+GIMTTLV YG+LQEKIMRVPYG + +YFK+SLFLVFCNR+ TSAVSA
Sbjct: 7   KDNKLWKGLFAVAGIMTTLVTYGVLQEKIMRVPYGVNKDYFKHSLFLVFCNRITTSAVSA 66

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWG 109
           G L+AS+K +DPVAPVYKYCLVS++NILTTTCQYE                      +WG
Sbjct: 67  GVLLASKKTVDPVAPVYKYCLVSITNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWG 126

Query: 110 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 169
           T+IMQK+YKG+DY LAL+VTLGCSIF+L+P+ A++SPY +GRE+TVWGVSLM+GYLGFDG
Sbjct: 127 TIIMQKKYKGHDYLLALIVTLGCSIFVLYPASAEISPYDRGRESTVWGVSLMIGYLGFDG 186

Query: 170 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 229
           FTSTFQDKLFKGY+M+IHNQIFYTTLCSC+LSL+GLIL+GHL  AI+FVY H DCFFD+A
Sbjct: 187 FTSTFQDKLFKGYNMDIHNQIFYTTLCSCILSLTGLILQGHLLPAIEFVYLHKDCFFDIA 246

Query: 230 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 289
            LSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ IG+++VF
Sbjct: 247 FLSTVATGSQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVLVF 306

Query: 290 GALYTRSFFKKVSEKPRPSEHPMEN 314
           G++Y RSF +  ++K   SE P + 
Sbjct: 307 GSIYARSFLRNATQKLPTSETPEDR 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547228|ref|XP_003542018.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/331 (70%), Positives = 272/331 (82%), Gaps = 22/331 (6%)

Query: 6   ITAIGVKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLM 65
           + +I   + +  K  F V+GIM TLV YG+LQEKIMRVPYG + EYFK+SLFLVFCNR+ 
Sbjct: 12  VDSIPRDNDKFWKGSFTVAGIMVTLVTYGLLQEKIMRVPYGTEKEYFKHSLFLVFCNRIT 71

Query: 66  TSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE------------------- 106
           TSAVSAG+L+AS+K +DPVAP+YKYCL+S+SNILTTTCQYE                   
Sbjct: 72  TSAVSAGSLLASKKVLDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMI 131

Query: 107 ---IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVG 163
              +WG LIMQKRY+G DY LA LVTLGCS FIL+P+G D+SPYS+GRENTVWG+ LMVG
Sbjct: 132 PVMVWGALIMQKRYQGPDYLLAFLVTLGCSAFILYPAGTDMSPYSRGRENTVWGILLMVG 191

Query: 164 YLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD 223
           YLGFDGFTSTFQDKLF+GYDMEIHNQIFYTTLCSCVLSL+GLIL+GHL  AI+FVYHH D
Sbjct: 192 YLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCVLSLTGLILQGHLIPAIEFVYHHHD 251

Query: 224 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCI 283
           CFFD+ALLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ I
Sbjct: 252 CFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWI 311

Query: 284 GSIIVFGALYTRSFFKKVSEKPRPSEHPMEN 314
           G++IVFG+LY +SF +K+ +K  PS   ++N
Sbjct: 312 GAVIVFGSLYGKSFSRKMPQKTTPSIALVQN 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542497|ref|XP_003539703.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 1-like [Glycine max]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/335 (68%), Positives = 276/335 (82%), Gaps = 25/335 (7%)

Query: 12  KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSA 71
           +++++ K  FAV+GIM TLV YG+LQEKIMRVPYG + +YFKYSLFLVFCNR+ TSAVSA
Sbjct: 19  RENKLWKGTFAVAGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSA 78

Query: 72  GTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWG 109
           G L+AS+KA+DPVAP+YKYCLVS+SNILTT+CQYE                      +WG
Sbjct: 79  GALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWG 138

Query: 110 TLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDG 169
           T IMQKRY+G DY LA +VTLGCS+FIL+P+G D+SPY +GRENTVWGV LM+GYLG DG
Sbjct: 139 TAIMQKRYRGTDYLLAFVVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMLGYLGCDG 198

Query: 170 FTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVA 229
           FTSTFQDK+FKGY+MEIHNQIFYTTLCSC+LSL+GLI++GHL  A++FVY H DCFFD+A
Sbjct: 199 FTSTFQDKMFKGYNMEIHNQIFYTTLCSCILSLAGLIIQGHLLPAVEFVYIHKDCFFDIA 258

Query: 230 LLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVF 289
           LLSTVAT SQFFISYTIRTFGALTFATIMTTRQLVSI+LSCVWF HPLSWEQ IG++IVF
Sbjct: 259 LLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSILLSCVWFAHPLSWEQWIGAVIVF 318

Query: 290 GALYTRSFFKKVSEKPRPSEHPMENMHNGASSLMK 324
           GA+Y +SF +K  EK   S   +E++ NG S+ +K
Sbjct: 319 GAIYAKSFLRKAPEKTTSS---VEHVQNGNSNNLK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
TAIR|locus:2174289	344	AT5G59740 "AT5G59740" [Arabido	0.615	0.595	0.774	2.7e-128
TAIR|locus:2075311	347	UTR5 "AT3G46180" [Arabidopsis	0.597	0.573	0.798	2.4e-127
DICTYBASE|DDB_G0269602	359	slc35b2 "solute carrier family	0.549	0.509	0.489	2e-57
ZFIN|ZDB-GENE-050213-1	435	slc35b2 "solute carrier family	0.612	0.468	0.355	9.7e-46
UNIPROTKB|F1NC34	431	SLC35B2 "Uncharacterized prote	0.606	0.468	0.364	4.7e-44
MGI|MGI:1921086	431	Slc35b2 "solute carrier family	0.606	0.468	0.347	4.7e-44
RGD|1565318	431	Slc35b2 "solute carrier family	0.606	0.468	0.342	9.4e-43
UNIPROTKB|Q3ZBB0	433	SLC35B2 "Uncharacterized prote	0.612	0.471	0.347	1.8e-42
UNIPROTKB|F1PA99	414	SLC35B2 "Uncharacterized prote	0.612	0.492	0.347	1.2e-41
UNIPROTKB|J9NY30	432	SLC35B2 "Uncharacterized prote	0.612	0.472	0.347	1.2e-41

TAIR|locus:2174289 AT5G59740 "AT5G59740" [Arabidopsis thaliana (taxid:3702)]

 Score = 871 (311.7 bits), Expect = 2.7e-128, Sum P(2) = 2.7e-128
 Identities = 161/208 (77%), Positives = 182/208 (87%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             +WGTLIMQK+YKG+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLM GYLG
Sbjct:   129 VWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGVSLMAGYLG 188

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FDGFTSTFQDKLFKGY+MEIHNQIFYTTLCSCVLS +GLIL+GHL  A+DFV  H DC  
Sbjct:   189 FDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFVSLHRDCLL 248

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
             D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLSWEQCIGS+
Sbjct:   249 DIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSV 308

Query:   287 IVFGALYTRSFF--KKVSE-KPRPSEHP 311
             IVFG+LY ++    KK S+ +P P E P
Sbjct:   309 IVFGSLYAKNLLNNKKNSQTQPPPPELP 336

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0045132 "meiotic chromosome segregation" evidence=RCA

TAIR|locus:2075311 UTR5 "AT3G46180" [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 2.4e-127, Sum P(2) = 2.4e-127
 Identities = 159/199 (79%), Positives = 181/199 (90%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             +WGTLIMQK+Y+G+DY +A LVTLGCS+FILFP+G D+SPY+KGRENTVWGVSLMVGYLG
Sbjct:   130 VWGTLIMQKKYRGFDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLG 189

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FDGFTSTFQDKLFKGY+MEIHNQIFYTT+CS +LS +GLIL+GHL  A+DFV  H DC F
Sbjct:   190 FDGFTSTFQDKLFKGYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLF 249

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
             D+ALLSTVAT SQFFISYTIRTFGALTFA IMTTRQL SI+LSC+WF HPLSWEQCIGS+
Sbjct:   250 DIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSV 309

Query:   287 IVFGALYTRSFFKKVSEKP 305
             IVFG+LY ++F KK SEKP
Sbjct:   310 IVFGSLYAKTFVKKKSEKP 328

GO:0005354 "galactose transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0269602 slc35b2 "solute carrier family 35 member B2" [Dictyostelium discoideum (taxid:44689)]

 Score = 425 (154.7 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 92/188 (48%), Positives = 122/188 (64%)

Query:   109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
             GT I  K+Y   DY +AL +T GC IF L  +G  +S  +    NT +G+ LM  Y+ FD
Sbjct:   144 GTFISGKKYGLKDYSIALTITTGCMIFFL--TGK-IS--NNESSNTSYGIILMALYMFFD 198

Query:   169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
              FTSTFQ+K+FKGY M  ++Q+ Y   CS ++S+  LIL G LF AI+F+  H   FFD 
Sbjct:   199 SFTSTFQEKMFKGYTMSTYDQMIYVNGCSSIISVFILILNGRLFPAIEFISTHNGVFFDS 258

Query:   229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
              +LS  A   Q  I YTI+ FGAL F+TIM TRQ+VSI+LS + + HPLS  Q IG+++V
Sbjct:   259 TMLSASAGLGQMVIYYTIKEFGALVFSTIMVTRQMVSIILSTLIYLHPLSNTQWIGALLV 318

Query:   289 FGALYTRS 296
             FG LY +S
Sbjct:   319 FGTLYYKS 326

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-050213-1 slc35b2 "solute carrier family 35, member B2" [Danio rerio (taxid:7955)]

 Score = 331 (121.6 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
 Identities = 75/211 (35%), Positives = 120/211 (56%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             + G ++ +K Y+ ++Y  A+L++LG S+F+L  S  D  P +     T  GV ++ GY+ 
Sbjct:   230 LMGKIVSRKSYEYWEYLTAVLISLGVSMFLL-SSSTDKHPSTV---TTFSGVLILAGYIV 285

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FD FTS +QD LFK Y M     +F   L SC+ ++  L+ +G  F ++ F+  H +  F
Sbjct:   286 FDSFTSNWQDNLFK-YKMSSVQMMFGVNLFSCLFTVGSLLEQGAFFNSLAFMTRHSEFAF 344

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
                LLS  +   Q FI +TI  FGA  F  IMT RQ ++I+LSC  + HP+S    +G  
Sbjct:   345 HAVLLSVCSAFGQLFIFFTIAQFGAAVFTIIMTLRQALAILLSCFLYGHPVSLTGGLGVG 404

Query:   287 IVFGALYTRSFFKKVSEKP--RPSEHPMENM 315
             +VF AL+ R + +   +K   RP++ P++ +
Sbjct:   405 VVFLALFLRIYARSRVKKSTKRPAQTPVQKV 435

GO:0055085 "transmembrane transport" evidence=IEA

GO:0051216 "cartilage development" evidence=IMP

GO:0001503 "ossification" evidence=IMP

GO:0030166 "proteoglycan biosynthetic process" evidence=IMP

GO:0042476 "odontogenesis" evidence=IMP

GO:0030198 "extracellular matrix organization" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0001649 "osteoblast differentiation" evidence=IMP

UNIPROTKB|F1NC34 SLC35B2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 306 (112.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 77/211 (36%), Positives = 113/211 (53%)

Query:   109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
             G L+  K Y+ ++Y  A L+++G S+F+L  S A     S     T  GV L+ GY+ FD
Sbjct:   226 GKLVSHKSYEYWEYLTAALISVGVSMFLL--SSAPNRHVST--VTTFSGVVLLAGYIVFD 281

Query:   169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
              FTS +QD LF  Y M     +F   + SC+ ++  L+ +G L  ++ F+  H +     
Sbjct:   282 SFTSNWQDALFT-YKMSPVQMMFGVNVFSCLFTVGSLLEQGALLESVHFMARHSEFTAHA 340

Query:   229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
              LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  +V
Sbjct:   341 VLLSVCSACGQLFIFYTINQFGAAVFTIIMTLRQAFAILLSCLIYGHTVTVVGGLGIAVV 400

Query:   289 FGAL----YTRSFFKKVSEKPRPSEHPMENM 315
             F AL    Y RS  KK S+K  P E P++ +
Sbjct:   401 FMALFLRVYARSRMKKRSKKLPPGETPVQKV 431

GO:0016021 "integral to membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

MGI|MGI:1921086 Slc35b2 "solute carrier family 35, member B2" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 73/210 (34%), Positives = 115/210 (54%)

Query:   109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
             G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct:   227 GKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVLLAGYIAFD 282

Query:   169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
              FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +     
Sbjct:   283 SFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFALHA 341

Query:   229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
              LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + H ++    +G  +V
Sbjct:   342 LLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGVAVV 401

Query:   289 FGALYTRSFF---KKVSEKPRPSEHPMENM 315
             F AL  R +    K+  +K  P+E P++ +
Sbjct:   402 FTALLLRVYARGRKQRGKKAVPTEPPVQKV 431

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1565318 Slc35b2 "solute carrier family 35, member B2" [Rattus norvegicus (taxid:10116)]

 Score = 292 (107.8 bits), Expect = 9.4e-43, Sum P(2) = 9.4e-43
 Identities = 72/210 (34%), Positives = 114/210 (54%)

Query:   109 GTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD 168
             G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ FD
Sbjct:   227 GKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLVLLAGYIAFD 282

Query:   169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDV 228
              FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +     
Sbjct:   283 SFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFALHA 341

Query:   229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV 288
              LLS  +   Q FI YTI  FGA  F  IMT RQ ++I+LSC+ + H ++    +G  +V
Sbjct:   342 LLLSVCSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGVAVV 401

Query:   289 FGALYTRSFF---KKVSEKPRPSEHPMENM 315
             F AL  R +    K+  +K  P+E  ++ +
Sbjct:   402 FTALLLRVYARGRKQRGKKAVPTEPAVQKV 431

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA;ISO

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA;ISO

UNIPROTKB|Q3ZBB0 SLC35B2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 303 (111.7 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 74/213 (34%), Positives = 115/213 (53%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             + G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P+S     T+ G+ L+ GY+ 
Sbjct:   226 LMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PHSSPA-TTLSGLILLAGYIA 281

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L   I F+  H +   
Sbjct:   282 FDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGIRFMGRHSEFAA 340

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
                LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  
Sbjct:   341 HTLLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVA 400

Query:   287 IVFGAL----YTRSFFKKVSEKPRPSEHPMENM 315
             +VF AL    Y R   K+  +K  P E  ++ +
Sbjct:   401 VVFAALLLRVYARGRLKQRGKKAMPVESSVQKV 433

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=IEA

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PA99 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
 Identities = 74/213 (34%), Positives = 114/213 (53%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             + G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ 
Sbjct:   207 LMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLILLAGYIA 262

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +   
Sbjct:   263 FDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGTRFMGRHSEFAA 321

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
                LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  
Sbjct:   322 HALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVA 381

Query:   287 IVFGAL----YTRSFFKKVSEKPRPSEHPMENM 315
             +VF AL    Y R   K+  +K  P E P++ +
Sbjct:   382 VVFAALLLRVYARGRLKQRGKKAVPVESPVQKV 414

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J9NY30 SLC35B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
 Identities = 74/213 (34%), Positives = 114/213 (53%)

Query:   107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLG 166
             + G L+ ++ Y+ ++Y  A L+++G S+F+L  SG +  P S     T+ G+ L+ GY+ 
Sbjct:   225 LMGKLVSRRSYEHWEYLTAGLISIGVSMFLL-SSGPE--PRSSPA-TTLSGLILLAGYIA 280

Query:   167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF 226
             FD FTS +QD LF  Y M     +F   L SC+ ++  L+ +G L     F+  H +   
Sbjct:   281 FDSFTSNWQDALF-AYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGTRFMGRHSEFAA 339

Query:   227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI 286
                LLS  +   Q FI YTI  FGA  F  IMT RQ  +I+LSC+ + H ++    +G  
Sbjct:   340 HALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVA 399

Query:   287 IVFGAL----YTRSFFKKVSEKPRPSEHPMENM 315
             +VF AL    Y R   K+  +K  P E P++ +
Sbjct:   400 VVFAALLLRVYARGRLKQRGKKAVPVESPVQKV 432

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NMB6	UTR5B_ARATH	No assigned EC number	0.7083	0.9339	0.9040	yes	no
Q6NM25	UTR5_ARATH	No assigned EC number	0.7284	0.8738	0.8386	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024400001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (344 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	333
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-70
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	7e-04

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  221 bits (566), Expect = 1e-70
 Identities = 90/306 (29%), Positives = 132/306 (43%), Gaps = 30/306 (9%)

Query: 20  IFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK 79
           +  +SGI       G+LQE IM   YG+      +   L F   L  S V    L+  +K
Sbjct: 2   LICISGIFGGYCSNGVLQELIMTREYGSP-----FGNLLTFAQFLFISLVGLLYLLLFKK 56

Query: 80  AIDPVAPVYKYCLVSMSNILTTTCQYE----------------------IWGTLIMQKRY 117
                 P+  Y L+  +  L++    E                      I G LI  KRY
Sbjct: 57  LKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRY 116

Query: 118 KGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDK 177
               Y  ALL+TLG  IF L  +    +       +   G++L+ G L  D  T   Q+K
Sbjct: 117 SSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDN-VGIALLFGALLMDALTGNTQEK 175

Query: 178 LFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFL--AIDFVYHHLDCFFDVALLSTVA 235
           L+K Y       +FY+ L S    L GL+      L  A  F   H    F + L S   
Sbjct: 176 LYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQ 235

Query: 236 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR 295
              QFF+ Y I  FGALT   + T R+ VS++LS + F +PL+ +Q +G+++VF  ++  
Sbjct: 236 YVGQFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLY 295

Query: 296 SFFKKV 301
           ++ KK 
Sbjct: 296 AYLKKK 301

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 10/139 (7%)

Query: 167 FDGFTSTFQDKLFKGYDMEIHN---QIFYTTLCSCVLSLSGLILEG--HLFLAIDFVYHH 221
                     KL K       N    ++Y +  + ++ L GL+      L   I   +  
Sbjct: 11  LFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKLGKFILKFFGD 70

Query: 222 LDCFFDVALLSTVATTSQF--FISY-TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLS 278
           L     V LL      +      ++  +     LT +   T +++V IVLS + F  P++
Sbjct: 71  LKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVT 130

Query: 279 WEQCIGSII-VFG-ALYTR 295
           +   +G  I + G  LY+ 
Sbjct: 131 FLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	333
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.95
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
PLN00411	358	nodulin MtN21 family protein; Provisional	99.87
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.83
PRK11272	292	putative DMT superfamily transporter inner membran	99.82
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.82
PRK11689	295	aromatic amino acid exporter; Provisional	99.82
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.79
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.77
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.77
PRK15430	296	putative chloramphenical resistance permease RarD;	99.75
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.69
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.64
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.63
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.63
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.6
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.59
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.58
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.58
KOG2766	336	consensus Predicted membrane protein [Function unk	99.52
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.45
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.42
COG2962	293	RarD Predicted permeases [General function predict	99.33
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.3
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.27
KOG2765	416	consensus Predicted membrane protein [Function unk	99.16
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.09
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.03
COG2510	140	Predicted membrane protein [Function unknown]	99.03
PRK15430	296	putative chloramphenical resistance permease RarD;	98.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.8
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.52
PLN00411	358	nodulin MtN21 family protein; Provisional	98.43
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.32
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.27
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.25
COG2962	293	RarD Predicted permeases [General function predict	98.19
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.18
PRK11272	292	putative DMT superfamily transporter inner membran	98.17
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.03
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.01
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.95
PRK11689	295	aromatic amino acid exporter; Provisional	97.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.93
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.73
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.71
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.69
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.53
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.52
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.49
COG2510	140	Predicted membrane protein [Function unknown]	97.42
PRK13499	345	rhamnose-proton symporter; Provisional	97.34
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.34
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.15
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.12
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.04
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.03
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.86
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.85
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.7
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.62
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.51
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.48
PRK11431	105	multidrug efflux system protein; Provisional	96.42
COG2076	106	EmrE Membrane transporters of cations and cationic	96.3
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.1
PRK13499	345	rhamnose-proton symporter; Provisional	95.92
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.68
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.31
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	94.74
KOG2765	416	consensus Predicted membrane protein [Function unk	94.5
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	94.21
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.03
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.03
KOG1581	327	consensus UDP-galactose transporter related protei	93.96
PRK09541	110	emrE multidrug efflux protein; Reviewed	93.69
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.67
KOG2922	335	consensus Uncharacterized conserved protein [Funct	92.67
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	92.2
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	91.3
PRK10650	109	multidrug efflux system protein MdtI; Provisional	91.22
COG2076	106	EmrE Membrane transporters of cations and cationic	90.95
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	90.03
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	89.67
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	88.64
PRK11431	105	multidrug efflux system protein; Provisional	86.39
KOG3912	372	consensus Predicted integral membrane protein [Gen	86.18
KOG2766	336	consensus Predicted membrane protein [Function unk	86.18
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	85.25
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	83.89
KOG1580	337	consensus UDP-galactose transporter related protei	83.26
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	82.96

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-53  Score=378.63  Aligned_cols=296  Identities=47%  Similarity=0.825  Sum_probs=276.0

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHH
Q 019984           13 DSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCL   92 (333)
Q Consensus        13 ~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~   92 (333)
                      .++.+++++|+.|||++|++||++||+|+|++||+++++|.+|.|+.++|.+++.++++.++.+++++.+++.|++.|..
T Consensus         9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~   88 (327)
T KOG1581|consen    9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSL   88 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhH
Confidence            46789999999999999999999999999999999999999999999999999999999988888877888999999999


Q ss_pred             HHHHHHhhhhhhHH----------------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCC
Q 019984           93 VSMSNILTTTCQYE----------------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKG  150 (333)
Q Consensus        93 ~s~~~~~a~~~~~~----------------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~  150 (333)
                      +|++|..+..|+|+                      +++.++.|+||++.+|++..++.+||.+|.+.+.+ + +++..+
T Consensus        89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s-~-s~~~~g  166 (327)
T KOG1581|consen   89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNS-D-SSSKSG  166 (327)
T ss_pred             HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCC-C-CccccC
Confidence            99999999888866                      88999999999999999999999999999988543 2 233445


Q ss_pred             CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984          151 RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL  230 (333)
Q Consensus       151 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~  230 (333)
                      .+++++|+.++..++++||+++..||+++++++++++++|+++|++++++....++..|...++++|...||+.++++++
T Consensus       167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999998888999998999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCCCC
Q 019984          231 LSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSEH  310 (333)
Q Consensus       231 l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~~~  310 (333)
                      ++.++++||.|+|++++++||++.++++++|+++++++|+++|||++++.||+|..+|++|+++..+.|+|++++.++|+
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~~~k~~  326 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQPRKKKA  326 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCcccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988666655554

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.4e-47  Score=327.15  Aligned_cols=300  Identities=28%  Similarity=0.437  Sum_probs=261.1

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHhhhhccccccCC---CCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchh
Q 019984           12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYG---ADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVY   88 (333)
Q Consensus        12 ~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~---~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (333)
                      .-++..++.+|++||+.||..|||.||+|++-+||   +++++|+|.+.++|+||.++.+++-++...+++...++.|-+
T Consensus         7 ~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~   86 (337)
T KOG1580|consen    7 WLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTK   86 (337)
T ss_pred             ccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcch
Confidence            34566789999999999999999999999999997   456799999999999999999999776655554556678899


Q ss_pred             hHHHHHHHHHhhhhh--------hHH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCC
Q 019984           89 KYCLVSMSNILTTTC--------QYE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSP  146 (333)
Q Consensus        89 ~y~~~s~~~~~a~~~--------~~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~  146 (333)
                      .|+.+|+++..+|..        .||              +++.++.+|+|+|++|.++++++.||+++.+.+++  .  
T Consensus        87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K--v--  162 (337)
T KOG1580|consen   87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK--V--  162 (337)
T ss_pred             HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc--c--
Confidence            999999998877743        244              89999999999999999999999999999998432  1  


Q ss_pred             CCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHH
Q 019984          147 YSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFF  226 (333)
Q Consensus       147 ~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  226 (333)
                      ....++...+|-++.++|+.+||+++..|||+.+.|..+..+||+|+|+++++.+...++++||+++.+.|..+||.+|+
T Consensus       163 ~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~  242 (337)
T KOG1580|consen  163 GGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFW  242 (337)
T ss_pred             CCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHH
Confidence            11123567889999999999999999999999998888899999999999999988888999999998899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCC
Q 019984          227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPR  306 (333)
Q Consensus       227 ~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~  306 (333)
                      ++.++++++.+||.|+|.++..+||+++|++++.|++++++.|+++|+||++.+||+|..+++.|+.......++.++..
T Consensus       243 ~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~  322 (337)
T KOG1580|consen  243 DLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTA  322 (337)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988876655444444


Q ss_pred             CCCCCCccc
Q 019984          307 PSEHPMENM  315 (333)
Q Consensus       307 ~~~~~~~~~  315 (333)
                      ++|.+.|++
T Consensus       323 akkp~~~~~  331 (337)
T KOG1580|consen  323 AKKPLAATE  331 (337)
T ss_pred             ccCCCcCCC
Confidence            444444443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=7.3e-41  Score=311.95  Aligned_cols=279  Identities=35%  Similarity=0.544  Sum_probs=244.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHHHH
Q 019984           19 MIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMSNI   98 (333)
Q Consensus        19 ~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~~~   98 (333)
                      +++|++|+|++|+.|+++||++++++++.     ++|++++++|++++.+++.+.....+.+.+++.|+++|++.++.+.
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~-----~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGS-----PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF   75 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCC-----cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH
Confidence            36899999999999999999999987752     7999999999999999998877665545667899999999988877


Q ss_pred             hhhhhh--------HH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHH
Q 019984           99 LTTTCQ--------YE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVW  156 (333)
Q Consensus        99 ~a~~~~--------~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~  156 (333)
                      .++.++        ||              +++.+++||||+++||++++++++|++++..++...+. ..+........
T Consensus        76 ~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~-~~~~~~~~~~~  154 (303)
T PF08449_consen   76 LASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS-SSNSSSFSSAL  154 (303)
T ss_pred             HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc-ccccccccchh
Confidence            665443        33              78999999999999999999999999999988542211 11111122345


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHh--cCchhHHHHhhhhChHhHHHHHHHHHH
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLIL--EGHLFLAIDFVYHHLDCFFDVALLSTV  234 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~il~l~~~  234 (333)
                      |++++++|.++||+++++|||++++++.++.++++|+|++++++.++..+.  +++..+..++...+|..+.+++..+++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998887766  788888888888999999999999999


Q ss_pred             HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccC
Q 019984          235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  303 (333)
Q Consensus       235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~  303 (333)
                      ++++|.+++++++++||++.++++++||++++++|+++|||++++.||+|+++++.|+.++.+.|+|||
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999998875

; GO: 0055085 transmembrane transport

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-36  Score=265.64  Aligned_cols=276  Identities=27%  Similarity=0.383  Sum_probs=243.6

Q ss_pred             CCccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcee-ehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhh
Q 019984           11 VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFK-YSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYK   89 (333)
Q Consensus        11 ~~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~-~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (333)
                      .+++++.|+++|.+|+++.|+.||++||.+++.+      .|+ |.|+++++|.++.+.++++.+... +.+++..|||.
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~------gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rt  108 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVE------GFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRT  108 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccc------cCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhH
Confidence            4678899999999999999999999999999653      565 999999999999988887755432 23466799999


Q ss_pred             HHHHHHHHHhhh--------hhhHH--------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 019984           90 YCLVSMSNILTT--------TCQYE--------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  147 (333)
Q Consensus        90 y~~~s~~~~~a~--------~~~~~--------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~  147 (333)
                      |..+|...+..+        +++||              +.+.++-++||.+.++.+..+.++|++++++.|+  +.+  
T Consensus       109 Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs--~~s--  184 (367)
T KOG1582|consen  109 YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS--QTS--  184 (367)
T ss_pred             hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc--ccC--
Confidence            988876554433        55666              6788899999999999999999999999999853  222  


Q ss_pred             CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChH-hHH
Q 019984          148 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLD-CFF  226 (333)
Q Consensus       148 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~  226 (333)
                         ..++..|+.++..++++||+.+..||+.++.++-+..|+.+|...++.++.+..+..+|++..++.+...||. ...
T Consensus       185 ---PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG  261 (367)
T KOG1582|consen  185 ---PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG  261 (367)
T ss_pred             ---CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH
Confidence               3688999999999999999999999999999988889999999999999998888999999999999999886 666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          227 DVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       227 ~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      ..++.+..+++|+.+....++.+||.+++.+++.||.+++++|+++|.+|+|.++.-|..+++.|+++..+.|+
T Consensus       262 y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  262 YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            66777999999999999999999999999999999999999999999999999999999999999999888873

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.96  E-value=1.4e-27  Score=222.55  Aligned_cols=270  Identities=14%  Similarity=0.100  Sum_probs=198.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHh-cCC-CCCCCchhhHHHHH
Q 019984           17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIAS-RKA-IDPVAPVYKYCLVS   94 (333)
Q Consensus        17 ~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~y~~~s   94 (333)
                      ++....+..||.++..++++||.+.        +.|++|+++++.|++++++...+.+... +++ ..++.+++..++++
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l--------~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   72 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLL--------NVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVA   72 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH--------hhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            4678889999999999999999998        2478999999999999887766543221 111 11223445556666


Q ss_pred             HHHHhhhhhh------------------HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCc
Q 019984           95 MSNILTTTCQ------------------YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRE  152 (333)
Q Consensus        95 ~~~~~a~~~~------------------~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~  152 (333)
                      +.+.....+.                  .|    +++++++|||++++++++++++++|+++....    +.       +
T Consensus        73 ~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~~-------~  141 (302)
T TIGR00817        73 IVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----EL-------S  141 (302)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----cc-------c
Confidence            5543222111                  11    78999999999999999999999999876432    21       3


Q ss_pred             chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchh-HHHHhhh----hChHhHHH
Q 019984          153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLF-LAIDFVY----HHLDCFFD  227 (333)
Q Consensus       153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~----~~~~~~~~  227 (333)
                      ++..|+++++++.++++++.++.||..++.+.|+.+.+.|+++++.+.++|.....++.. ...++..    ..+.....
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYT  221 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHH
Confidence            457899999999999999999999987755678899999999999988888755433211 1111100    01111121


Q ss_pred             -HHHHHH-HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCC
Q 019984          228 -VALLST-VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKP  305 (333)
Q Consensus       228 -il~l~~-~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~  305 (333)
                       .+..+. +....+.+.+++++++||+++++.++++|++++++|++++||++|+.+++|.++++.|+++++..|+||+|+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~  301 (302)
T TIGR00817       222 VSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP  301 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCC
Confidence             222222 333445567789999999999999999999999999999999999999999999999999999877655554

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=1.3e-26  Score=219.98  Aligned_cols=267  Identities=13%  Similarity=0.104  Sum_probs=200.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCC----CCchhh
Q 019984           14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDP----VAPVYK   89 (333)
Q Consensus        14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   89 (333)
                      +..+|++.++..||.++..+.+.+|.+.        +.+++|++++++|++++++++.+.+....++.++    +..++.
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl--------~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  116 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLAL--------NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKN  116 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            4479999999999999999999999998        3478999999999999988776654332121111    123456


Q ss_pred             HHHHHHHHHhhhh-------------hh-----HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC
Q 019984           90 YCLVSMSNILTTT-------------CQ-----YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY  147 (333)
Q Consensus        90 y~~~s~~~~~a~~-------------~~-----~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~  147 (333)
                      .+++++.+.....             .+     .|    +++++++|||++++++++++++++|+++.+.+    |.   
T Consensus       117 llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~----~~---  189 (350)
T PTZ00343        117 FLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK----EL---  189 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc----cc---
Confidence            6677765432211             00     11    88999999999999999999999999998754    32   


Q ss_pred             CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC-----CChHHHHHHhhHHHHHHHHHHHH-hcCch-hHHHH-h--
Q 019984          148 SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-----MEIHNQIFYTTLCSCVLSLSGLI-LEGHL-FLAID-F--  217 (333)
Q Consensus       148 ~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~-~--  217 (333)
                          +.+..|++++++|.+++++++++.|+++++++     .++.+...++.+++.++++|... .|+.. ..... .  
T Consensus       190 ----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~  265 (350)
T PTZ00343        190 ----HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTA  265 (350)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhh
Confidence                45788999999999999999999999987653     56777777888999998888754 44321 11110 0  


Q ss_pred             -hhhC--hHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984          218 -VYHH--LDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  294 (333)
Q Consensus       218 -~~~~--~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~  294 (333)
                       ....  ...+..++..+++..+.+.+.|+++++++|+++++.+++||++++++|++++||++|+.|++|.+++++|+++
T Consensus       266 ~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        266 NMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence             0000  1111122222444445556777899999999999999999999999999999999999999999999999999


Q ss_pred             hhhhc
Q 019984          295 RSFFK  299 (333)
Q Consensus       295 ~~~~k  299 (333)
                      |++.|
T Consensus       346 Ys~~k  350 (350)
T PTZ00343        346 YSLFK  350 (350)
T ss_pred             HhhcC
Confidence            98764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.3e-27  Score=210.12  Aligned_cols=264  Identities=20%  Similarity=0.311  Sum_probs=195.8

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCchhhHHHH---
Q 019984           18 KMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAIDPVAPVYKYCLV---   93 (333)
Q Consensus        18 ~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~~~---   93 (333)
                      +.+..+.+++.+++..-+..|.+.+.+.| ++      ..++++|+++-+.-+++..  .+ ...+|++|++.|+.+   
T Consensus         3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~pg-sg------NLITFaqFlFia~eGlif~--skf~~~k~kiplk~Y~i~V~m   73 (330)
T KOG1583|consen    3 MAAAAISLVFGGCCSNVVFLELLVRNEPG-SG------NLITFAQFLFIATEGLIFT--SKFFTVKPKIPLKDYAITVAM   73 (330)
T ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHhCCC-Ce------eehHHHHHHHHHHhceeee--ccccccCCCCchhhhheehhe
Confidence            44566788999999999999999988765 33      3778888887777776532  33 335688999999753   


Q ss_pred             ----HHHHHhhhhhhHH----------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC----CC
Q 019984           94 ----SMSNILTTTCQYE----------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY----SK  149 (333)
Q Consensus        94 ----s~~~~~a~~~~~~----------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~----~~  149 (333)
                          +++|+-+..++.+                +++|++.||||+.+||.+++++++|++++++.++. |.+.+    +.
T Consensus        74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~-d~~~~~~~l~~  152 (330)
T KOG1583|consen   74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK-DGRSKLSGLDS  152 (330)
T ss_pred             eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc-chhhhhccccc
Confidence                4455544333322                89999999999999999999999999999886432 22110    01


Q ss_pred             C---Ccc--hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhh----
Q 019984          150 G---REN--TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH----  220 (333)
Q Consensus       150 ~---~~~--~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----  220 (333)
                      +   .+.  ..+|+.+...+++.+|..+++||..++|||.++.|.+||++..+.++.+   +..+++.+.+.....    
T Consensus       153 ~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~  229 (330)
T KOG1583|consen  153 GSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESY  229 (330)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcce
Confidence            1   122  2458899999999999999999999999999999999999999876554   233344333222211    


Q ss_pred             --------ChHhHHHHHHHHHHHHHHHH-HHHH---HHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984          221 --------HLDCFFDVALLSTVATTSQF-FISY---TIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  288 (333)
Q Consensus       221 --------~~~~~~~il~l~~~~~l~~~-~~~~---~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lv  288 (333)
                              -|..|+    +.+++++.|+ |+-.   .-.+++++|++++.++||++++++|++.|.+|+|+++|+|.++|
T Consensus       230 ~~p~~g~~vP~~~~----yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lV  305 (330)
T KOG1583|consen  230 LIPLLGFKVPSMWV----YLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALV  305 (330)
T ss_pred             eccccCccccHHHH----HHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHH
Confidence                    233333    3556677775 3333   35799999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhh
Q 019984          289 FGALYTRSFF  298 (333)
Q Consensus       289 l~Gv~~~~~~  298 (333)
                      +.|-.++.-.
T Consensus       306 F~Gt~~fa~~  315 (330)
T KOG1583|consen  306 FFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHHH
Confidence            9986665544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.93  E-value=1.6e-26  Score=212.76  Aligned_cols=274  Identities=19%  Similarity=0.216  Sum_probs=217.9

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCch
Q 019984           12 KDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAPV   87 (333)
Q Consensus        12 ~~~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~   87 (333)
                      ..++.++..++..-||+++..+++++|++..+      ..|+||++++.+|.+++.+...+...+ |..    .+++.++
T Consensus        11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~------~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~~~~~~~~~~~~   83 (316)
T KOG1441|consen   11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK------YGFPFPITLTMLHLFCGALALLVIKVL-KLVPPSKISSKLPL   83 (316)
T ss_pred             ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc------CCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCCccccccch
Confidence            44467888899999999999999999999943      359999999999888887766554333 321    1234567


Q ss_pred             hhHHHHHHHHHhhhhhh------------------HH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCC
Q 019984           88 YKYCLVSMSNILTTTCQ------------------YE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS  145 (333)
Q Consensus        88 ~~y~~~s~~~~~a~~~~------------------~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~  145 (333)
                      +..+++++.+..+..++                  .|    ++++++.+|++++..++++++++.||++.+.+    |. 
T Consensus        84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~----e~-  158 (316)
T KOG1441|consen   84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT----EL-  158 (316)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec----cc-
Confidence            77777777655433221                  11    88999999999999999999999999999886    42 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHh--cCCCChHHHHHHhhHHHHHHHH-HHHH-hcCchhHHHHhhhhC
Q 019984          146 PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFK--GYDMEIHNQIFYTTLCSCVLSL-SGLI-LEGHLFLAIDFVYHH  221 (333)
Q Consensus       146 ~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~~~~~~~~~~~~  221 (333)
                            +++++|++.++.+.+..++++++++++++  +++.|+.+++.|+.+++...++ |... .+++.. . .+....
T Consensus       159 ------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~  230 (316)
T KOG1441|consen  159 ------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAP  230 (316)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccc
Confidence                  58999999999999999999999999984  5679999999999999999888 7643 444332 0 001001


Q ss_pred             hH-hHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          222 LD-CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       222 ~~-~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      +. ......+.+++++..|+..|.+++++||+|.++.+++|.++.++.|+++|++|+|+.|.+|+++.+.|+++|++.|.
T Consensus       231 ~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  231 WFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            11 11222333688888899999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCCC
Q 019984          301 VSEKP  305 (333)
Q Consensus       301 ~~~~~  305 (333)
                      ++++.
T Consensus       311 ~~~~~  315 (316)
T KOG1441|consen  311 KEKKG  315 (316)
T ss_pred             hhhcc
Confidence            77754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=6.9e-23  Score=190.99  Aligned_cols=245  Identities=15%  Similarity=0.172  Sum_probs=177.7

Q ss_pred             eeehHHHHHHHHHHHHHHHHHHHHHhcCC--C--CCCCchhhHHHHHHHHHhhhhhh-----HH----------------
Q 019984           52 FKYSLFLVFCNRLMTSAVSAGTLIASRKA--I--DPVAPVYKYCLVSMSNILTTTCQ-----YE----------------  106 (333)
Q Consensus        52 f~~p~~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~y~~~s~~~~~a~~~~-----~~----------------  106 (333)
                      ++.|.+-++..-+.-.++-...+.+++.+  .  ..+.++++|++.++.++.++++.     |.                
T Consensus        40 ~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~  119 (334)
T PF06027_consen   40 VNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFV  119 (334)
T ss_pred             ccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHH
Confidence            45677766655433332222222333321  1  23468899999999887766442     11                


Q ss_pred             -HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC
Q 019984          107 -IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME  185 (333)
Q Consensus       107 -ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~  185 (333)
                       +++++++|+||++.|+++++++++|+++....|..+.  +.+++.++.+.|+++++++++++|++++++|++.+++  +
T Consensus       120 ~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~--~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~--~  195 (334)
T PF06027_consen  120 MILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSG--SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA--P  195 (334)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccccc--ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC--C
Confidence             8999999999999999999999999999888753211  1112346789999999999999999999999999854  6


Q ss_pred             hHHHHHHhhHHHHHHHHHH-HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHH
Q 019984          186 IHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLV  264 (333)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~  264 (333)
                      ..+.+....++++++..+. .+++.+-.+..++   +++.+..++.++++..+.+.+.-..++..||+..++...+..+.
T Consensus       196 ~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w---~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~  272 (334)
T PF06027_consen  196 RVEFLGMLGLFGFIISGIQLAILERSGIESIHW---TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFY  272 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheehhhhhccCC---ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHH
Confidence            7888999999999888775 3455432222222   33444333434444434444555578999999999999999999


Q ss_pred             HHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccC
Q 019984          265 SIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSE  303 (333)
Q Consensus       265 sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~  303 (333)
                      ++++++++||+++++..++|.++|+.|+++|+..+.+.+
T Consensus       273 ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  273 ALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             HHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            999999999999999999999999999999987765443

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.87  E-value=1.1e-19  Score=172.51  Aligned_cols=276  Identities=17%  Similarity=0.214  Sum_probs=177.2

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCch---hh
Q 019984           14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRK-AIDPVAPV---YK   89 (333)
Q Consensus        14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~   89 (333)
                      .+..+.-.....+-.+|..+.++-+..++.-.        .|..+.+.|+.++.++..+....+++ ++.++.++   ..
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~--------~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~   80 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGL--------NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSK   80 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCC--------CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence            34455555555666677777777777764321        34457799998887776655444332 22232233   33


Q ss_pred             HHHHHHHHHhh------------------hhhhHH----HHHHHH------hCcccCchhHHHHHHHHHhhHHhhccCCC
Q 019984           90 YCLVSMSNILT------------------TTCQYE----IWGTLI------MQKRYKGYDYFLALLVTLGCSIFILFPSG  141 (333)
Q Consensus        90 y~~~s~~~~~a------------------~~~~~~----ll~~l~------~~~k~s~~~~l~vlli~~Gv~l~~~~~~~  141 (333)
                      +...++.....                  ....+|    ++++++      +|||.++++++++++.++|+.+....++.
T Consensus        81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~  160 (358)
T PLN00411         81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGP  160 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCc
Confidence            44444432110                  011123    777777      59999999999999999999987653211


Q ss_pred             CC-------------CC-CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHH-HHHHH
Q 019984          142 AD-------------LS-PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLS-LSGLI  206 (333)
Q Consensus       142 ~~-------------~~-~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  206 (333)
                      ..             .. ....+..+...|+++++.+++++|++.+.+++..++++ +.....++...++.+.. .+.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~  239 (358)
T PLN00411        161 RVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLV  239 (358)
T ss_pred             ccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHH
Confidence            00             00 00001122366999999999999999999999888763 23344445444444333 33344


Q ss_pred             hcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhh
Q 019984          207 LEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSI  286 (333)
Q Consensus       207 ~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~  286 (333)
                      .+++....+ ....+... ..+++.++.+.+++.++++++++.||.++++..++.|++++++|++++||++++.+++|.+
T Consensus       240 ~~~~~~~~~-~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~  317 (358)
T PLN00411        240 VEKNNPSVW-IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI  317 (358)
T ss_pred             HccCCcccc-eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence            443211110 00012222 2355555556677788999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhhcc
Q 019984          287 IVFGALYTRSFFKK  300 (333)
Q Consensus       287 lvl~Gv~~~~~~k~  300 (333)
                      +++.|+++..+.|+
T Consensus       318 LIl~Gv~l~~~~~~  331 (358)
T PLN00411        318 LITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHhhhh
Confidence            99999988776443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.83  E-value=4.1e-19  Score=158.89  Aligned_cols=257  Identities=13%  Similarity=0.142  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCchhhHH----HHHHH
Q 019984           24 SGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYC----LVSMS   96 (333)
Q Consensus        24 ~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~----~~s~~   96 (333)
                      .++|.+-+.-..+|++..        .+|+||.+++.+|.++-.+++...++..+.+   .+.+..|+.|+    ++++.
T Consensus        22 l~yY~~Si~Ltf~~~~~~--------~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala   93 (349)
T KOG1443|consen   22 LLYYFLSIGLTFYFKWLT--------KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA   93 (349)
T ss_pred             HHHHHHHHHHHHHhhhhh--------cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence            455554444444444443        3589999999999999999988776654422   23345677665    66554


Q ss_pred             H---Hhhhhhh--------H----------H-HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcch
Q 019984           97 N---ILTTTCQ--------Y----------E-IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT  154 (333)
Q Consensus        97 ~---~~a~~~~--------~----------~-ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~  154 (333)
                      .   ++.++.+        |          . +++.++.-||++|.-.+.++++.+|++++++.+           ++++
T Consensus        94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks-----------Tqf~  162 (349)
T KOG1443|consen   94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS-----------TQFN  162 (349)
T ss_pred             hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc-----------ccee
Confidence            2   2222111        1          1 556655559999999999999999999999872           2578


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHhcCC---CChHHHHHHhhHHHHHHHHHH-HHhcCchhH----HHHhhhhChHhHH
Q 019984          155 VWGVSLMVGYLGFDGFTSTFQDKLFKGYD---MEIHNQIFYTTLCSCVLSLSG-LILEGHLFL----AIDFVYHHLDCFF  226 (333)
Q Consensus       155 ~~G~~l~l~s~~~~a~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~----~~~~~~~~~~~~~  226 (333)
                      +.|+.++..+.++.|+++.+.+.++++.+   .+|..++++..++..+.++|. +.+||....    .+++. .+...++
T Consensus       163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~-d~~~~~r  241 (349)
T KOG1443|consen  163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQ-DTGLILR  241 (349)
T ss_pred             ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhc-CccHHHH
Confidence            99999999999999999999999988764   578999999999988877775 678875321    22221 1223444


Q ss_pred             HHHHHHHHHHHHH---HHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          227 DVALLSTVATTSQ---FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       227 ~il~l~~~~~l~~---~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      .+..++.++.+..   .+-|..+.+++.+|.++.+..|.+.++++++.+.++.++..+|.|..+++.|+.++...++
T Consensus       242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~  318 (349)
T KOG1443|consen  242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQ  318 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCcc
Confidence            4444455554443   4556678999999999999999999999999999999999999999999999999855433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.82  E-value=8.2e-18  Score=156.06  Aligned_cols=259  Identities=12%  Similarity=0.079  Sum_probs=177.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHH
Q 019984           15 RVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVS   94 (333)
Q Consensus        15 ~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s   94 (333)
                      |.+.+..+.......+.+..+.-+.... .        -.|..+++.|++++.++..+....+|++.+++.+++.+...+
T Consensus         5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~--------~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g   75 (292)
T PRK11272          5 QLLPLFGALFALYIIWGSTYLVIRIGVE-S--------WPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIG   75 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhc-c--------CCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHH
Confidence            4455666666666666666666554442 1        267899999999988776665444443322333344443333


Q ss_pred             HHHHh--------h----------h--hhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCC
Q 019984           95 MSNIL--------T----------T--TCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKG  150 (333)
Q Consensus        95 ~~~~~--------a----------~--~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~  150 (333)
                      ..+..        +          .  ....|    +++++ +|||+++++++++++.++|+.+...++   +.      
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~---~~------  145 (292)
T PRK11272         76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG---NL------  145 (292)
T ss_pred             HHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc---cc------
Confidence            32210        0          0  01122    66664 699999999999999999998876431   11      


Q ss_pred             CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984          151 RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL  230 (333)
Q Consensus       151 ~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~  230 (333)
                       +.+..|+++.+++.+++|.+.+..||..++   ++.....+...++.+...+.....++...    ...++..|..+++
T Consensus       146 -~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~  217 (292)
T PRK11272        146 -SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALGY  217 (292)
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHH
Confidence             234579999999999999999999886432   23344456666666655555433332111    0123456767777


Q ss_pred             HHHH-HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          231 LSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       231 l~~~-~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      +++. +.+++.++++++++.++.+.++...++|+++.+++++++||++++.+++|.++++.|+++.+..++
T Consensus       218 l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        218 LAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            7654 557778899999999999999999999999999999999999999999999999999888766544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.82  E-value=1.7e-17  Score=154.48  Aligned_cols=186  Identities=14%  Similarity=0.220  Sum_probs=136.9

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC-CC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD-ME  185 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~-~~  185 (333)
                      +++++++|||+++++++++++.++|+.++..++.  +      +.+.+..|+++++.+.++++.+.+++||..++++ .+
T Consensus       102 ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~  173 (299)
T PRK11453        102 VLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPA  173 (299)
T ss_pred             HHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccc
Confidence            7899999999999999999999999998874421  1      1133567999999999999999999999765432 22


Q ss_pred             hHHHHHHhhHHHHHHHHHH-HHhcCchhHHHHhhhhChHhHHHHHHHHH-HHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984          186 IHNQIFYTTLCSCVLSLSG-LILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIRTFGALTFATIMTTRQL  263 (333)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~~l~~~~~~~~i~~~~alt~sv~~~l~~v  263 (333)
                      .....++....+.+..... ...+++.....++...++..|..++++++ ++.+++.++++.+++.++.+.+++..++|+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv  253 (299)
T PRK11453        174 VMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPV  253 (299)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            2233344443333222222 22333221111111235567778888855 445677788889999999999999999999


Q ss_pred             HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      +++++|++++||++++.+++|.++++.|+++..+.++
T Consensus       254 ~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        254 VGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999988776655

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.82  E-value=4.6e-18  Score=157.94  Aligned_cols=184  Identities=13%  Similarity=0.028  Sum_probs=134.4

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++++++|||+++++++++++.++|++++..++.+.+......+..+...|+++++.+.+++|.++++.||..+++  ++
T Consensus       107 ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~  184 (295)
T PRK11689        107 LFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NG  184 (295)
T ss_pred             HHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--Cc
Confidence            7889999999999999999999999998875421000000000012345799999999999999999999976543  44


Q ss_pred             HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHH
Q 019984          187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSI  266 (333)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~si  266 (333)
                      ....+   ..+.+.+.+....+++..     ...+++.|..+++.++.+.+++.++++++++.+|.+.++..+++|++++
T Consensus       185 ~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~  256 (295)
T PRK11689        185 ITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSA  256 (295)
T ss_pred             hhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHH
Confidence            44322   222222222222333211     1124556767666677777889999999999999999999999999999


Q ss_pred             HhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          267 VLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       267 lls~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      +++++++||++++.+++|.++++.|+++.....+
T Consensus       257 i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        257 ALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999877765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.79  E-value=4.4e-17  Score=148.17  Aligned_cols=170  Identities=15%  Similarity=0.114  Sum_probs=137.1

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++++++|||++++++.++++.++|+.+...++   +       .+.+..|+.+.+.+.++++.+.++.|+..++++.++
T Consensus        89 ~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~  158 (260)
T TIGR00950        89 LLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG---N-------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL  158 (260)
T ss_pred             HHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC---c-------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence            788999999999999999999999999876442   1       134578999999999999999999999887665545


Q ss_pred             HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHHHHHHHHHHHHhhChhHHHHHHHHHHHHH
Q 019984          187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYTIRTFGALTFATIMTTRQLVS  265 (333)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l~~~~~~~~i~~~~alt~sv~~~l~~v~s  265 (333)
                      .....+...++.++..+.....++...      .++..|..+++.++. +.+++.++++++++.++.+.++...++|+++
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~  232 (260)
T TIGR00950       159 LQFTGWVLLLGALLLLPFAWFLGPNPQ------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            555556677777777776554443111      134455566666554 4678889999999999999999999999999


Q ss_pred             HHhHhhhccCCCcccccchhhhhhhhh
Q 019984          266 IVLSCVWFRHPLSWEQCIGSIIVFGAL  292 (333)
Q Consensus       266 ills~~~fge~~t~~~~iG~~lvl~Gv  292 (333)
                      .+++++++||++++.+++|.++++.|+
T Consensus       233 ~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       233 LLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999886

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.77  E-value=3.5e-17  Score=148.27  Aligned_cols=255  Identities=15%  Similarity=0.138  Sum_probs=189.4

Q ss_pred             HhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhc-CCCC--CCCchhhHHHHHHHHHhhhhh-----h-
Q 019984           34 GILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASR-KAID--PVAPVYKYCLVSMSNILTTTC-----Q-  104 (333)
Q Consensus        34 ~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~y~~~s~~~~~a~~~-----~-  104 (333)
                      -+.+|.+.+.      .+||-..++...|.+++++.-.+.- ..| .+.+  ++...|+++|+++..+.....     + 
T Consensus        28 ~vvNK~vls~------y~f~~~l~l~~~Q~l~s~~~v~~lk-~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~  100 (314)
T KOG1444|consen   28 TVVNKIVLSS------YNFPMGLLLMLLQSLASVLVVLVLK-RLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKY  100 (314)
T ss_pred             HHHHHHHHhc------CCCcHHHHHHHHHHHHHHHHHHHHH-HhceeecCCcChHHHHHHccHHHHHHHHHHHccccccc
Confidence            3446666531      2344445555599998876654422 222 1111  234457788888765543321     1 


Q ss_pred             -----HH-----------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhh
Q 019984          105 -----YE-----------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFD  168 (333)
Q Consensus       105 -----~~-----------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~  168 (333)
                           |+           +.+.+++|+|+++..|.++..+.+|......+    |.       .++..|+.++..++++.
T Consensus       101 lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~----d~-------sf~~~gY~w~~~n~~~~  169 (314)
T KOG1444|consen  101 LNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT----DL-------SFNLRGYSWALANCLTT  169 (314)
T ss_pred             cCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc----cc-------eecchhHHHHHHHHHHH
Confidence                 11           77889999999999999999999998877655    32       46677999999999999


Q ss_pred             hhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh---hChHhHHHHHHHHHHHHHHHHHHHHH
Q 019984          169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY---HHLDCFFDVALLSTVATTSQFFISYT  245 (333)
Q Consensus       169 a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~il~l~~~~~l~~~~~~~~  245 (333)
                      +...++.|+..+..+.+.+++++|.|+++.+.+....+++||+. +..+..   ..+..+..+...++++..-.++.+++
T Consensus       170 a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~c  248 (314)
T KOG1444|consen  170 AAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLC  248 (314)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999888777788899999999999988877777888865 333321   23455666666688888888999999


Q ss_pred             HHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCC
Q 019984          246 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP  307 (333)
Q Consensus       246 i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~  307 (333)
                      .+..||+|.++++...+..+.+..++.+++++++.+.+|..+-+.|=.+|++.+.|||+.+|
T Consensus       249 t~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  249 TRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            99999999999996677777777777777899999999999998877788888877766655

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.77  E-value=3.8e-16  Score=144.94  Aligned_cols=254  Identities=10%  Similarity=0.014  Sum_probs=164.7

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHH
Q 019984           17 LKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS   96 (333)
Q Consensus        17 ~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~   96 (333)
                      .+-..+...-..++...+...|.....        + .|..+.+.|++++.++..+....++++. ++..++.....++.
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~--------~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~g~~   80 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPL--------V-GAPGVTALRLALGTLILIAIFKPWRLRF-AKEQRLPLLFYGVS   80 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHH--------c-CHHHHHHHHHHHHHHHHHHHHhHHhccC-CHHHHHHHHHHHHH
Confidence            444555555566677777766666521        1 4567999999998877655432222211 22222222222221


Q ss_pred             HHhhh------------------hhhHHHHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHH
Q 019984           97 NILTT------------------TCQYEIWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGV  158 (333)
Q Consensus        97 ~~~a~------------------~~~~~ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~  158 (333)
                      .....                  ...+|++..++-+||.++.  ..+.+.++|+.+....+.  +.      +..+..|+
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~~~~~~~--~~~~i~~~Gv~li~~~~~--~~------~~~~~~G~  150 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDF--VWVVLAVLGLWFLLPLGQ--DV------SHVDLTGA  150 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcCChHHH--HHHHHHHHHHheeeecCC--Cc------ccCChHHH
Confidence            11111                  1223466666666766544  455677899887653311  11      12356899


Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHH
Q 019984          159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATT  237 (333)
Q Consensus       159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l  237 (333)
                      ++.+.+.+++|.+.+..||..+++  ++... .+...++.+...|....++...      ..++..|...+++++. +.+
T Consensus       151 ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        151 ALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999886644  44444 3455666665555544332210      0233445455566555 445


Q ss_pred             HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984          238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  299 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k  299 (333)
                      ++.++++++++.+|.+++++..++|++++++|++++||++++.+++|.+++++|+..+.+..
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            66788999999999999999999999999999999999999999999999999988877554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.75  E-value=4.9e-16  Score=144.47  Aligned_cols=253  Identities=8%  Similarity=0.011  Sum_probs=155.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCC--C-CCchhh-
Q 019984           14 SRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAID--P-VAPVYK-   89 (333)
Q Consensus        14 ~~~~~~~~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~-   89 (333)
                      ++..+-.++......+|...++..+.+.  +       . .|.-+.+.|++++.++.......++++.+  + ..+.+. 
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~~--~-------~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLIY--Y-------V-PADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI   73 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhc--C-------C-CHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH
Confidence            3445555666666666766776665432  1       1 37789999999987755444433322100  0 001111 


Q ss_pred             -HHHHHHH-------------------HHhhhhhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCC
Q 019984           90 -YCLVSMS-------------------NILTTTCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLS  145 (333)
Q Consensus        90 -y~~~s~~-------------------~~~a~~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~  145 (333)
                       ....+..                   +.....+.+|    +++++++|||.++++++++++..+|+++....+   .  
T Consensus        74 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~---~--  148 (296)
T PRK15430         74 FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF---G--  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc---C--
Confidence             1111111                   1111112233    788999999999999999999999999876431   1  


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhH
Q 019984          146 PYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCF  225 (333)
Q Consensus       146 ~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  225 (333)
                            +..    .+.+.+.+++|++.+.+|+..++...+......+..+++.+...+.  .....    ......+..+
T Consensus       149 ------~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~  212 (296)
T PRK15430        149 ------SLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--ADSST----SHMGQNPMSL  212 (296)
T ss_pred             ------Ccc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--ccCCc----ccccCCcHHH
Confidence                  111    3466678899999999887643211122222233333332221111  11111    0001123222


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984          226 FD-VALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       226 ~~-il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~  297 (333)
                      .. +++.++.+.+++.++++++++.+|.+++++..++|++++++|++++||++++.+++|+++++.|+.+...
T Consensus       213 ~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        213 NLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            23 3333667778999999999999999999999999999999999999999999999999999877655544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.69  E-value=5.3e-16  Score=129.84  Aligned_cols=141  Identities=18%  Similarity=0.264  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhc-----CCCChHHHHHHhhHHHHHHHHHHHHhcCchh--HHHHhhhh-----ChHh
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKG-----YDMEIHNQIFYTTLCSCVLSLSGLILEGHLF--LAIDFVYH-----HLDC  224 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~-----~~~~  224 (333)
                      |+++++.|.++.|++++++|+.+++     .+.++.++++|+++.++++++|..+..++..  +.......     .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999999988     5789999999999999999888754433321  11111111     2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984          225 FFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       225 ~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~  297 (333)
                      +..++..++.+.+.+++.+.+++++||+++++.+.+|+++.+++|+++|||++|+.+++|+++++.|..+|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555556888888899999999999999999999999999999999999999999999999999999998875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.64  E-value=3.3e-16  Score=138.21  Aligned_cols=252  Identities=15%  Similarity=0.155  Sum_probs=179.7

Q ss_pred             CceeehHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCc--h---hhHHHHHHH--------HHhhhhhh---H----
Q 019984           50 EYFKYSLFLVFCNRLMTSAVSAGTLIASRKA----IDPVAP--V---YKYCLVSMS--------NILTTTCQ---Y----  105 (333)
Q Consensus        50 ~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~---~~y~~~s~~--------~~~a~~~~---~----  105 (333)
                      -...-|.|.+++||++...++.......++.    .-|..+  +   +...+.++.        |.+..+..   |    
T Consensus        56 ~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgR  135 (347)
T KOG1442|consen   56 VILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGR  135 (347)
T ss_pred             hhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEecc
Confidence            4566899999999999988887655433321    111111  1   222233322        22222111   1    


Q ss_pred             ----H---HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHH
Q 019984          106 ----E---IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKL  178 (333)
Q Consensus       106 ----~---ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l  178 (333)
                          +   ++.++++|+|-+..-..++++++.|-.+   +-   |.+.  ..+..++.|.++.+.|.++-|+..++.+|.
T Consensus       136 sLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l---Gv---dqE~--~~~~ls~~GvifGVlaSl~vAlnaiytkk~  207 (347)
T KOG1442|consen  136 SLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL---GV---DQEG--STGTLSWIGVIFGVLASLAVALNAIYTKKV  207 (347)
T ss_pred             chhhhHHHHhHHhhcccccccccceeehhheehhee---cc---cccc--ccCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence                1   8899999999999999999999988443   31   1111  123678899999999999999999999877


Q ss_pred             HhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhh-ChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHH
Q 019984          179 FKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATI  257 (333)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~  257 (333)
                      ....+-..+.+.+|+|+.+.++.+|.+++.|++.+-+.|... ....|..+.+-+++++.-++.-.+-||.+||+|+.+.
T Consensus       208 l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnIS  287 (347)
T KOG1442|consen  208 LPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNIS  287 (347)
T ss_pred             cccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeec
Confidence            665555678899999999999999999999987654443211 2233433333366665444455555899999999999


Q ss_pred             HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCCC
Q 019984          258 MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPSE  309 (333)
Q Consensus       258 ~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~~  309 (333)
                      ++.|.+...++++.+++|..+..-|-|-.+++.|-..|.+.|..+.++.+++
T Consensus       288 gTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~  339 (347)
T KOG1442|consen  288 GTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ  339 (347)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999888998877655444433

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.63  E-value=3.8e-13  Score=123.86  Aligned_cols=191  Identities=13%  Similarity=0.249  Sum_probs=145.0

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCC-CCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPY-SKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDME  185 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~-~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~  185 (333)
                      ++..+++|||.+++||.++++.+.|+++......+ +..+. ...+.+...|+..++.+++.+|+.+++.||++|+.+.+
T Consensus       134 ~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~-~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s  212 (345)
T KOG2234|consen  134 IFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS-PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS  212 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC-CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence            88999999999999999999999999999843211 11111 12246788999999999999999999999999987777


Q ss_pred             hHHHHHHhhHHHHHHHHHHHHhcC-chhHHHHhhhhCh-HhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984          186 IHNQIFYTTLCSCVLSLSGLILEG-HLFLAIDFVYHHL-DCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL  263 (333)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~-~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v  263 (333)
                      .+-....+..+|.++.+...+.++ +-.....++..+. ..|..    .+...+|.+++...+|+.+...-+-...+.-+
T Consensus       213 ~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~v----Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aii  288 (345)
T KOG2234|consen  213 LWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLV----VLLNAVGGLLVSLVMKYADNILKGFSTSVAII  288 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHH----HHHHhccchhHHHHHHHhHHHHHHHHHHHHHH
Confidence            777777777888887776554432 2111122333332 23322    33344455677778888899988888999999


Q ss_pred             HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984          264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  302 (333)
Q Consensus       264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~  302 (333)
                      ++.+.|+.+|+.++|....+|..+|+..+.+|...+++.
T Consensus       289 lt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  289 LTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            999999999999999999999999999999999666654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.63  E-value=2.3e-15  Score=129.26  Aligned_cols=261  Identities=12%  Similarity=0.097  Sum_probs=179.6

Q ss_pred             hhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHH-----HHHhhhhhhHH---
Q 019984           35 ILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSM-----SNILTTTCQYE---  106 (333)
Q Consensus        35 ~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~-----~~~~a~~~~~~---  106 (333)
                      +.+|.+..      ..+|+--..+.++|.+++.+-..+....+-.+.| ..+.+.|+++|+     .+.++..++|-   
T Consensus        23 ltNKyVls------~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vp   95 (309)
T COG5070          23 LTNKYVLS------NLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMIYTSSKSLQYLAVP   95 (309)
T ss_pred             HhhHheec------CCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHHHhcccceeeeeee
Confidence            44555552      3457777889999999887654443222111111 223344555444     34444444432   


Q ss_pred             --------------HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhH
Q 019984          107 --------------IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTS  172 (333)
Q Consensus       107 --------------ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~  172 (333)
                                    ....+++|+|.+..+..+.+++++.-+....+|.    +........-.-|++++..++...+.+-
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~----q~~~~~~~~lN~GY~Wm~~NclssaafV  171 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ----QASAFKAQILNPGYLWMFTNCLSSAAFV  171 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh----hHHHHHhcccCCceEEEehhhHhHHHHH
Confidence                          5678999999999999999999998887777742    1100001223459999999999988888


Q ss_pred             HHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHhHHHHHHHHHHHHHHHHHHHHHHHhhCh
Q 019984          173 TFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGA  251 (333)
Q Consensus       173 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~a  251 (333)
                      ...|+..+-.+...++.|+|.|+.+.++++...+...+..+. +... -.++...+++..+++++.-.++.-++++.+++
T Consensus       172 L~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSS  250 (309)
T COG5070         172 LIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSS  250 (309)
T ss_pred             HHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhh
Confidence            777765554445568899999999999887764433332221 1111 14455556666678876666888889999999


Q ss_pred             hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCC
Q 019984          252 LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRP  307 (333)
Q Consensus       252 lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~  307 (333)
                      ++.++++.+.|....+.|.++|++|.+...+..+.+-+..-.+|.+.|.+|+|.++
T Consensus       251 TtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         251 TTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             hHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999988655577777776655544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.60  E-value=4.6e-14  Score=130.20  Aligned_cols=170  Identities=13%  Similarity=0.128  Sum_probs=119.5

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++++++|||++++++++++++++|+.+....+   + +      ..+..|+.+++.+.++++.+.+..|+..++  .++
T Consensus       105 l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~---~-~------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~--~~~  172 (281)
T TIGR03340       105 IWATLTLGETLSPLAWLGILIITLGLLVLGLSR---F-A------QHRRKAYAWALAAALGTAIYSLSDKAAALG--VPA  172 (281)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccc---c-c------ccchhHHHHHHHHHHHHHHhhhhccccccc--hhc
Confidence            789999999999999999999999999876542   1 1      123468778888999999999887765332  222


Q ss_pred             H-HHHHHhhHHHHHHH-HHHHH---hcCchhHHHHhhhhChHhHHHHHHH-HHHHHHHHHHHHHHHHhhChhHHHHHHHH
Q 019984          187 H-NQIFYTTLCSCVLS-LSGLI---LEGHLFLAIDFVYHHLDCFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTT  260 (333)
Q Consensus       187 ~-~~~~~~~~~~~~~~-~~~~~---~~g~~~~~~~~~~~~~~~~~~il~l-~~~~~l~~~~~~~~i~~~~alt~sv~~~l  260 (333)
                      . ....+. .++.+.. .|...   ..++..    . ...+..+..+.+. ++++.+++.++++++++.++.+.+....+
T Consensus       173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l  246 (281)
T TIGR03340       173 FYSALGYL-GIGFLAMGWPFLLLYLKRHGRS----M-FPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNT  246 (281)
T ss_pred             ccccHHHH-HHHHHHHHHHHHHHHHHHhccc----h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeeccc
Confidence            1 112221 1222221 22211   111110    0 0112223343444 56667788899999999999999999999


Q ss_pred             HHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984          261 RQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  294 (333)
Q Consensus       261 ~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~  294 (333)
                      .|++++++|++++||+++..+++|.++++.|+.+
T Consensus       247 ~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       247 SIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.59  E-value=9.5e-14  Score=125.20  Aligned_cols=178  Identities=16%  Similarity=0.291  Sum_probs=134.0

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCC------CCcchHHHHHHHHHHHHhhhhhHHHHHHHHh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK------GRENTVWGVSLMVGYLGFDGFTSTFQDKLFK  180 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~------~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~  180 (333)
                      +++++++|||.+++||+++++.++|+++...++...+..+..+      .......|+++++++++++|+.+++.||++|
T Consensus        59 l~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK  138 (244)
T PF04142_consen   59 LFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLK  138 (244)
T ss_pred             HHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8899999999999999999999999999887643221000000      1234678999999999999999999999999


Q ss_pred             cCCCChHHHHHHhhHHHHHHHHHHHHhc-CchhHHHHhhhh-ChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHH
Q 019984          181 GYDMEIHNQIFYTTLCSCVLSLSGLILE-GHLFLAIDFVYH-HLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIM  258 (333)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~  258 (333)
                      +.+.+.+........+|.++.++..... ++......+... ++..|.    ..+..+++.+..-..+|+.+...-+..+
T Consensus       139 ~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~----~i~~~a~gGllva~v~KyadnI~K~fa~  214 (244)
T PF04142_consen  139 RSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWI----VIFLQAIGGLLVAFVLKYADNIVKGFAT  214 (244)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHH----HHHHHHHhhHHHHHHHHHHhHHHHHHHH
Confidence            9887878877888888888777654333 221111112111 222232    2344555667778899999999999999


Q ss_pred             HHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984          259 TTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  288 (333)
Q Consensus       259 ~l~~v~sills~~~fge~~t~~~~iG~~lv  288 (333)
                      .+.-+++.++|+++||.++|....+|..+|
T Consensus       215 a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  215 AVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             HHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            999999999999999999999999998765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.58  E-value=3e-12  Score=117.38  Aligned_cols=173  Identities=16%  Similarity=0.167  Sum_probs=127.5

Q ss_pred             HHHH-HHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcc-hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCC
Q 019984          107 IWGT-LIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGREN-TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDM  184 (333)
Q Consensus       107 ll~~-l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~-~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~  184 (333)
                      ++++ +++|||.++++++++++..+|+.+....+..    .     .. ...|+.+.+.+.++++++.+.+|+.. +  .
T Consensus       112 ~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~----~-----~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~  179 (292)
T COG0697         112 LLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG----G-----GILSLLGLLLALAAALLWALYTALVKRLS-R--L  179 (292)
T ss_pred             HHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc----c-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--C
Confidence            6775 6669999999999999999999998766311    0     11 57899999999999999999999876 3  3


Q ss_pred             ChHHHHH-HhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984          185 EIHNQIF-YTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQ  262 (333)
Q Consensus       185 ~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~  262 (333)
                      ++..... +..........+......+       .......+..+.+.++.+. +++.++++++++.++...+....++|
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  252 (292)
T COG0697         180 GPVTLALLLQLLLALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEP  252 (292)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence            3444443 2222111111111111111       1123345555566666555 68999999999999999999999999


Q ss_pred             HHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          263 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       263 v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      +.++++++++++|+++..+++|.++++.|+.+....
T Consensus       253 v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         253 VFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999998887655

>TIGR00803 nst UDP-galactose transporter

Probab=99.58  E-value=1e-14  Score=130.03  Aligned_cols=177  Identities=19%  Similarity=0.219  Sum_probs=115.4

Q ss_pred             HhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHH
Q 019984          112 IMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIF  191 (333)
Q Consensus       112 ~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~  191 (333)
                      .++++.+..||.++.....|+.+...++.. +   ......+.+.|..+++.+++++++.++++|+.+|+++.+.+....
T Consensus        45 ~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~---~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~  120 (222)
T TIGR00803        45 SLVASLGDDQWFSLKLLKLGVAIVQMVQSS-A---KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNL  120 (222)
T ss_pred             HHHhHhhHHHHHHHHHHHHhHeeeecCCCC-c---cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHH
Confidence            445555555555555555555444332110 0   001123568899999999999999999999987765443333344


Q ss_pred             HhhHHHHHHHHHHHHhc-CchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHh
Q 019984          192 YTTLCSCVLSLSGLILE-GHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC  270 (333)
Q Consensus       192 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~  270 (333)
                      .+.+++.+......... ++......+...+|...   ....+.+.+++.++.+++|+.|+++.++++++|++++.++|+
T Consensus       121 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~  197 (222)
T TIGR00803       121 QLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV---WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASV  197 (222)
T ss_pred             HHHHHHHHHHHHHHhhcccchhhccCcccCCchHH---HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            44444433322222221 12211112222333322   233455677888999999999999999999999999999999


Q ss_pred             hhccCCCcccccchhhhhhhhhhhh
Q 019984          271 VWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       271 ~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      ++|||+++..+|+|..+++.|+++|
T Consensus       198 ~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       198 RLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHhcCCccHHHHHHHHHHHeeeEeC
Confidence            9999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.52  E-value=2e-15  Score=132.12  Aligned_cols=201  Identities=16%  Similarity=0.180  Sum_probs=148.2

Q ss_pred             CCchhhHHHHHHHHHhhhh-----hhH--------------H---HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCC
Q 019984           84 VAPVYKYCLVSMSNILTTT-----CQY--------------E---IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSG  141 (333)
Q Consensus        84 ~~~~~~y~~~s~~~~~a~~-----~~~--------------~---ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~  141 (333)
                      +..|++|.+.++.++-+++     .+|              |   +++|+++|.||++.|+.++.++..||++...+|-+
T Consensus        75 ~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~  154 (336)
T KOG2766|consen   75 KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH  154 (336)
T ss_pred             HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence            3557788888877665542     222              1   78999999999999999999999999999887432


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhC
Q 019984          142 ADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHH  221 (333)
Q Consensus       142 ~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  221 (333)
                      .   ..++++++...|+.+++..+-++|..++.+|.+.|  +.+..++|....++|+++..+..+.+..-...+++   +
T Consensus       155 a---gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w---~  226 (336)
T KOG2766|consen  155 A---GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFERHHVSTLHW---D  226 (336)
T ss_pred             c---ccccCCCCCccCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEee---h
Confidence            1   12234577889999999999999999999999988  56889999999999999988776555432222111   1


Q ss_pred             hHhHHHHHHH--HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984          222 LDCFFDVALL--STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       222 ~~~~~~il~l--~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~  297 (333)
                         |....++  .++-++-.-+.--.+|..|++..++...+..+.++++  ..||-+++|...+..+.+..|+.+|+.
T Consensus       227 ---~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  227 ---SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence               1111111  2221111112222578999999999999999999999  677877999999999999999888843

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.45  E-value=7.3e-12  Score=111.29  Aligned_cols=190  Identities=15%  Similarity=0.098  Sum_probs=136.7

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++..+++++.+.+||++++.+.+|+++....|-+.+..+.+ +-++.+.|+++++.+.+.-|++.++.||.+++++++|
T Consensus       128 lfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~-d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~p  206 (372)
T KOG3912|consen  128 LFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT-DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAP  206 (372)
T ss_pred             HHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc-ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCH
Confidence            888999999999999999999999999987763221111111 1245678999999999999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHH-----HhcCc---------h---hHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019984          187 HNQIFYTTLCSCVLSLSGL-----ILEGH---------L---FLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTF  249 (333)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~-----~~~g~---------~---~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~  249 (333)
                      .+...|..+++.+++....     +..|+         +   .+.+......|.....+....+.-++.|+.-.+..|..
T Consensus       207 l~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~  286 (372)
T KOG3912|consen  207 LQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKEL  286 (372)
T ss_pred             HHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHh
Confidence            9999999999965433221     11221         1   11111112233222111111111111223333457899


Q ss_pred             ChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984          250 GALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       250 ~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~  297 (333)
                      |++|-.+...+|..+..++++....|.+...|+.|.++-+.|+.+|.-
T Consensus       287 SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  287 SATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             hHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999877764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.42  E-value=8.3e-11  Score=109.05  Aligned_cols=175  Identities=10%  Similarity=0.112  Sum_probs=124.7

Q ss_pred             HHHHHHhCcccCchh----HHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984          107 IWGTLIMQKRYKGYD----YFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  182 (333)
Q Consensus       107 ll~~l~~~~k~s~~~----~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~  182 (333)
                      +++.+++|||.++++    +++++++++|+++....+++ +.  +.++..+...|+.+.+++.++++.+...-|+.    
T Consensus       102 l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~-~~--~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----  174 (290)
T TIGR00776       102 LFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK-SA--GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----  174 (290)
T ss_pred             HHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc-cc--ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----
Confidence            678899999999999    99999999999987665321 11  00000233679999999999999999988764    


Q ss_pred             CCChHHHHHHhhH----HHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHH-hhChhHHHHH
Q 019984          183 DMEIHNQIFYTTL----CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIR-TFGALTFATI  257 (333)
Q Consensus       183 ~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~-~~~alt~sv~  257 (333)
                      +.+|.+..+....    .+.++..+. ....+      +  .....+..++ .++...+++.+++...+ +.++.+.++.
T Consensus       175 ~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~------~--~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~l  244 (290)
T TIGR00776       175 GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP------L--KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSL  244 (290)
T ss_pred             CCCcceehhHHHHHHHHHHHHHHHHH-hcccc------h--HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHH
Confidence            3466665333322    222222222 00011      1  1112333333 56666677778888888 9999999999


Q ss_pred             HHHHHHHHHHhHhhhccCCCccccc----chhhhhhhhhhhhhhh
Q 019984          258 MTTRQLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRSFF  298 (333)
Q Consensus       258 ~~l~~v~sills~~~fge~~t~~~~----iG~~lvl~Gv~~~~~~  298 (333)
                      ..++|+.+.+.+++++||+.++.|+    +|.++++.|+.+....
T Consensus       245 s~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       245 SQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999    9999999998776544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.33  E-value=1.2e-09  Score=98.29  Aligned_cols=173  Identities=14%  Similarity=0.154  Sum_probs=128.6

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++.+++|||.++.|++++++..+||..-....           ++.++..+.+++    .+++|+..-|++    ++++
T Consensus       114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-----------g~lpwval~la~----sf~~Ygl~RK~~----~v~a  174 (293)
T COG2962         114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-----------GSLPWVALALAL----SFGLYGLLRKKL----KVDA  174 (293)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-----------CCCcHHHHHHHH----HHHHHHHHHHhc----CCch
Confidence            889999999999999999999999999888762           145666666654    557777655433    5666


Q ss_pred             HHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHH
Q 019984          187 HNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVS  265 (333)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~s  265 (333)
                      .+-+..-.++-.+..+..++..++-.+   +.. .++..+..+...+..+.+.-.+.-.+-++.+=.+.++...++|..-
T Consensus       175 ~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~  251 (293)
T COG2962         175 LTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLM  251 (293)
T ss_pred             HHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            665555555555555544333322111   222 3445555555557777777677777899999999999999999999


Q ss_pred             HHhHhhhccCCCcccccchhhhhhhhhhhhhhhccc
Q 019984          266 IVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKV  301 (333)
Q Consensus       266 ills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~  301 (333)
                      .+++++++||+++..+++..+.+-.|+.++....-+
T Consensus       252 fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         252 FLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999888876443

>TIGR00688 rarD rarD protein

Probab=99.30  E-value=1.1e-09  Score=99.61  Aligned_cols=219  Identities=7%  Similarity=0.003  Sum_probs=131.6

Q ss_pred             HHHHHHHHHHHHHHhhhhccccccCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHhcCC------CC--CCCchh-hHH
Q 019984           21 FAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVSAGTLIASRKA------ID--PVAPVY-KYC   91 (333)
Q Consensus        21 ~~~~gi~~~~~~~~~~qe~i~~~~~~~~~~~f~~p~~l~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~-~y~   91 (333)
                      ++......+|...++..+.+.  +        -.|..+++.|+++++++..+....++++      .+  ++.+++ ...
T Consensus         5 ~~~i~a~~~wg~~~~~~k~~~--~--------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         5 IVSLLASFLFGYMYYYSKLLK--P--------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--c--------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence            344444456666776666532  1        2678899999998876654443332211      01  111111 111


Q ss_pred             HHHHH------------------HHhhhhhhHH----HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCC
Q 019984           92 LVSMS------------------NILTTTCQYE----IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSK  149 (333)
Q Consensus        92 ~~s~~------------------~~~a~~~~~~----ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~  149 (333)
                      ..++.                  +.....+.+|    +++++++|||+++++++++++..+|+++...++   .      
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~------  145 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---G------  145 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---C------
Confidence            11111                  1111122234    788999999999999999999999999876431   0      


Q ss_pred             CCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhCh-HhHHHH
Q 019984          150 GRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFDV  228 (333)
Q Consensus       150 ~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~i  228 (333)
                        +..    .+.+.+.++++.+.+..|+..++   +..+...+ .....+...+.....+....  ..  .++ ..|..+
T Consensus       146 --~~~----~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l  211 (256)
T TIGR00688       146 --SLP----WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFATV--QQ--TNPFPIWLLL  211 (256)
T ss_pred             --Cch----HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccCcc--cc--cCchhHHHHH
Confidence              112    24567888999999999886432   22222211 22222222222112111100  00  122 356666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhh
Q 019984          229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW  272 (333)
Q Consensus       229 l~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~  272 (333)
                      ++.++++.+++.++.+++++.+|.+.++..+++|+++.++++++
T Consensus       212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            67777788899999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.27  E-value=3.1e-12  Score=112.98  Aligned_cols=189  Identities=15%  Similarity=0.158  Sum_probs=137.9

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCC--CCCCCCCCCC-CcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPS--GADLSPYSKG-RENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYD  183 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~--~~~~~~~~~~-~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~  183 (333)
                      +++|+++||+++..+.++.++...||++..-.+-  .++.+..++. -+.+..|....+.+.++.|-..++.+++-|  +
T Consensus       139 ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~  216 (346)
T KOG4510|consen  139 IFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--N  216 (346)
T ss_pred             HHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--c
Confidence            8999999999999999999999999998753210  0011111111 134567777777777777777777777755  3


Q ss_pred             CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHH
Q 019984          184 MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQL  263 (333)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v  263 (333)
                      .|..-.+.|..+++++..++.+..-|+.    +. .+....|+.+..+++.+.++|++.-..+++=-|-..++..++.-+
T Consensus       217 ~h~~msvsyf~~i~lV~s~I~~~~ig~~----~l-P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvv  291 (346)
T KOG4510|consen  217 AHAIMSVSYFSLITLVVSLIGCASIGAV----QL-PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVV  291 (346)
T ss_pred             ccEEEEehHHHHHHHHHHHHHHhhccce----ec-CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHH
Confidence            4555566777788877777665444431    11 123345555566699999999999998887777778899999999


Q ss_pred             HHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984          264 VSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  302 (333)
Q Consensus       264 ~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~  302 (333)
                      ++.+.-+++|||.+|++.|.|+++++....+....|..+
T Consensus       292 fAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  292 FAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             HHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence            999999999999999999999999998877766555444

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.16  E-value=2.9e-10  Score=105.11  Aligned_cols=189  Identities=11%  Similarity=0.045  Sum_probs=141.6

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC--CC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY--DM  184 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~--~~  184 (333)
                      .++.++..+|+++.|.+++.+.++||++.+.++++.+   .+..+.....|.++.+++++.+|.|.++.||-..++  ++
T Consensus       201 ~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~---~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rv  277 (416)
T KOG2765|consen  201 FLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN---SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERV  277 (416)
T ss_pred             HHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc---ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            6677778999999999999999999999998854211   111235678999999999999999999998877766  47


Q ss_pred             ChHHHHHHhhHHHHHHHHHHHHhcCch-hHHHHhhhhChHhHHHHHHH-HHHHHHHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984          185 EIHNQIFYTTLCSCVLSLSGLILEGHL-FLAIDFVYHHLDCFFDVALL-STVATTSQFFISYTIRTFGALTFATIMTTRQ  262 (333)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~il~l-~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~  262 (333)
                      |...+..+..++.++++.|.+++-... .+.++. ...++. ..++.. .+.+++.-+++..+.-.++|++.++..++.-
T Consensus       278 di~lffGfvGLfnllllwP~l~iL~~~~~e~F~l-P~~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltI  355 (416)
T KOG2765|consen  278 DIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL-PSSTQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTI  355 (416)
T ss_pred             cHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC-CCCcee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEee
Confidence            777777788888888888764322110 011111 011121 122333 3344455588888899999999999999999


Q ss_pred             HHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          263 LVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       263 v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      -++++..+++=|+++|+.+++|.+.|++|.+..++..+
T Consensus       356 PLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  356 PLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            99999999999999999999999999999877776543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.09  E-value=3.6e-08  Score=86.91  Aligned_cols=219  Identities=12%  Similarity=0.090  Sum_probs=137.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhHHHHHHH----HHhhhhhh-----------HH----HHHHHHhCc
Q 019984           55 SLFLVFCNRLMTSAVSAGTLIASRKAIDPVAPVYKYCLVSMS----NILTTTCQ-----------YE----IWGTLIMQK  115 (333)
Q Consensus        55 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~s~~----~~~a~~~~-----------~~----ll~~l~~~~  115 (333)
                      |+-.++.|..++.++.+..++-+|++..+ ..++....-+.+    |.. .+..           .+    +.-.++.-|
T Consensus        40 ~~g~t~lRl~~aaLIll~l~RPwr~r~~~-~~~~~~~~yGvsLg~MNl~-FY~si~riPlGiAVAiEF~GPL~vA~~~sR  117 (292)
T COG5006          40 AAGVTALRLAIAALILLALFRPWRRRLSK-PQRLALLAYGVSLGGMNLL-FYLSIERIPLGIAVAIEFTGPLAVALLSSR  117 (292)
T ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHhccCh-hhhHHHHHHHHHHHHHHHH-HHHHHHhccchhhhhhhhccHHHHHHHhcc
Confidence            45678889888877766554433332221 122222221222    221 1111           11    334445556


Q ss_pred             ccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhH
Q 019984          116 RYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTL  195 (333)
Q Consensus       116 k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~  195 (333)
                      |..  +.+.+.+.+.|+.+..-.+.  .      ..+.+..|..+.+.+..||+.|-+.-+|.-+  ..+...-+..-..
T Consensus       118 r~~--d~vwvaLAvlGi~lL~p~~~--~------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~  185 (292)
T COG5006         118 RLR--DFVWVALAVLGIWLLLPLGQ--S------VWSLDPVGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGML  185 (292)
T ss_pred             chh--hHHHHHHHHHHHHhheeccC--C------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHH
Confidence            554  44455667788777654421  1      1256789999999999999999999888754  2233444555556


Q ss_pred             HHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhcc
Q 019984          196 CSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFR  274 (333)
Q Consensus       196 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fg  274 (333)
                      ++.++.+|+-+.....    .+  .+|.....-+..++++. +-+.+-.-++++.++-+.++...++|.+..+.+++++|
T Consensus       186 vAaviv~Pig~~~ag~----~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~  259 (292)
T COG5006         186 VAALIVLPIGAAQAGP----AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLG  259 (292)
T ss_pred             HHHHHHhhhhhhhcch----hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhc
Confidence            6677777764433221    11  25554433333344443 33445555899999999999999999999999999999


Q ss_pred             CCCcccccchhhhhhhhhh
Q 019984          275 HPLSWEQCIGSIIVFGALY  293 (333)
Q Consensus       275 e~~t~~~~iG~~lvl~Gv~  293 (333)
                      |.+|+.||+|++.|+.+..
T Consensus       260 e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         260 ETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHh
Confidence            9999999999999997654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.03  E-value=1.7e-09  Score=86.46  Aligned_cols=123  Identities=18%  Similarity=0.243  Sum_probs=96.4

Q ss_pred             hhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHH-HHHHHHHHHHH
Q 019984          167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTV-ATTSQFFISYT  245 (333)
Q Consensus       167 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~-~~l~~~~~~~~  245 (333)
                      ++|.+.+..|+..++  .|+....++....+.+ .++.....+...    ....+++.+...++.+.. +.+++.+.+++
T Consensus         2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHH
Confidence            578888899888875  6889999999888886 554433332211    111244455555666555 57888899999


Q ss_pred             HHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          246 IRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       246 i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +++.++...++...+.|+++.++++++++|++++.+++|+.+++.|+.+..
T Consensus        75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999987643

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.03  E-value=6.9e-10  Score=87.76  Aligned_cols=134  Identities=14%  Similarity=0.132  Sum_probs=107.4

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984          158 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  237 (333)
Q Consensus       158 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l  237 (333)
                      ..+.++++++.++..++.|-=.+  ++||....+.-++...+++...+...|+....-.   -+++.|..+.+.++.+.+
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~gl   79 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHHH
Confidence            34677788888998888865444  5677777777777777777777777776432111   256777777777888888


Q ss_pred             HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +-+++|++++.-.+..+..+.-+.+++++++|++++||++|..+|+|+.++..|..+.+
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            88999999999999999999999999999999999999999999999999999976543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.85  E-value=1.3e-07  Score=87.94  Aligned_cols=139  Identities=12%  Similarity=0.116  Sum_probs=105.2

Q ss_pred             chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHH
Q 019984          153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLS  232 (333)
Q Consensus       153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~  232 (333)
                      ....|..+++++.+++|...+..|.. .  +.+|.+..++...++.++.++.....++....... .+++..+.....-+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence            45679999999999999999999653 3  57899999999999987776665444432111110 01233322222223


Q ss_pred             HHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          233 TVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       233 ~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      +.....+.+.++++++.++...++...+.|+++.++++++++|+++..+|+|+++.+.|+.+.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence            444456788999999999999999999999999999999999999999999999999997654

>TIGR00688 rarD rarD protein

Probab=98.80  E-value=1.8e-07  Score=85.08  Aligned_cols=136  Identities=13%  Similarity=0.108  Sum_probs=102.9

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhh-hChHh-HHHHHHHHHH
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVY-HHLDC-FFDVALLSTV  234 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~il~l~~~  234 (333)
                      |..+++++.++++...+..|. ..  +.+|.+..++-.+++.+++.+.....++......... .+... +..+...++.
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            788899999999999999976 33  4899999999999998777665544433111100111 11111 2223333555


Q ss_pred             HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      ....+.+.+++++++++.+.+++..+.|+++.+++.++++|+++..+|+|..+.+.|+.+-
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            5667788999999999999999999999999999999999999999999999999997643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.52  E-value=1.4e-06  Score=80.25  Aligned_cols=132  Identities=9%  Similarity=-0.014  Sum_probs=93.3

Q ss_pred             HHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984          158 VSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  237 (333)
Q Consensus       158 ~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l  237 (333)
                      +.+.+.+.++++...+..|+..++.  ++  ..++....+.+...|........ .  .+.....+.+..++..++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQ-V--GWSRLPATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhccc-C--CCCCcchhhHHHHHHHHHHHHH
Confidence            3567788889999999998765532  22  33555566666666654332110 0  1100112223233333555667


Q ss_pred             HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      ++.+.++++++.++...+++..+.|+++.+++++++||+++..+|+|+++++.|+.+-.
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            77888899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.43  E-value=5.1e-06  Score=79.25  Aligned_cols=139  Identities=14%  Similarity=0.103  Sum_probs=103.7

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHH
Q 019984          156 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA  235 (333)
Q Consensus       156 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~  235 (333)
                      .-++.++.-.++++-..++.|..++ .++++....++-..++.++++|.....+...   .....+.+.|..+..+++++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHH
Confidence            3445566666777888888887774 5899999999999998888777654321100   00001223444555566666


Q ss_pred             HHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhh------ccCCCcccccchhhhhhhhhhhhhhh
Q 019984          236 TTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVW------FRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       236 ~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~------fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ++.+.+.+..+++++|...+++.++.|+++.++++++      ++|+++..+++|.++.+.|+.+-...
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            5556678889999999999999999999999999999      69999999999999999998765543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.32  E-value=0.0002  Score=65.12  Aligned_cols=171  Identities=11%  Similarity=0.084  Sum_probs=117.3

Q ss_pred             HHHHHHhCcccCchhHH----HHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984          107 IWGTLIMQKRYKGYDYF----LALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  182 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l----~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~  182 (333)
                      +++.++++|--+..+++    +++++++|+.+.+..+++++   +.+++.+...|+...+++.+.+..|.+..+-    .
T Consensus        88 l~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~---~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~  160 (269)
T PF06800_consen   88 LIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD---KSSSKSNMKKGILALLISTIGYWIYSVIPKA----F  160 (269)
T ss_pred             HHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHh----c
Confidence            78899999988877765    88889999999888753211   1112345667999999999998888888643    3


Q ss_pred             CCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHH
Q 019984          183 DMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQ  262 (333)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~  262 (333)
                      +.++++..+-..+--.+-.+.+.....+     .+  .+...|.. +.-++.=.+++++++...++.|..+.=..+-+..
T Consensus       161 ~~~~~~~~lPqaiGm~i~a~i~~~~~~~-----~~--~~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~v  232 (269)
T PF06800_consen  161 HVSGWSAFLPQAIGMLIGAFIFNLFSKK-----PF--FEKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGV  232 (269)
T ss_pred             CCChhHhHHHHHHHHHHHHHHHhhcccc-----cc--cccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHH
Confidence            5677766654433222222222222211     11  12233333 2225555678889999999999999999999999


Q ss_pred             HHHHHhHhhhccCCCcccc----cchhhhhhhhh
Q 019984          263 LVSIVLSCVWFRHPLSWEQ----CIGSIIVFGAL  292 (333)
Q Consensus       263 v~sills~~~fge~~t~~~----~iG~~lvl~Gv  292 (333)
                      +.+.+.+++++||+-+.++    ++|.++++.|.
T Consensus       233 vIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~  266 (269)
T PF06800_consen  233 VISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA  266 (269)
T ss_pred             HHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence            9999999999999988775    45777776654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.27  E-value=2.1e-05  Score=62.41  Aligned_cols=102  Identities=16%  Similarity=0.230  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH-HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhc
Q 019984          195 LCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT-TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWF  273 (333)
Q Consensus       195 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~-l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~f  273 (333)
                      .++.++..+.....++..+......+++  +......++++. .++.++++++++.++ ..+++..+.|+++.++|.++|
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~   82 (113)
T PF13536_consen    6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF   82 (113)
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence            3444555555455555433323222332  223334455444 666788889999995 777999999999999999999


Q ss_pred             cCCCcccccchhhhhhhhhhhhhhhc
Q 019984          274 RHPLSWEQCIGSIIVFGALYTRSFFK  299 (333)
Q Consensus       274 ge~~t~~~~iG~~lvl~Gv~~~~~~k  299 (333)
                      +|+++..+|+|+++++.|+.+-.+..
T Consensus        83 ~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   83 KERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999988776654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.25  E-value=3.1e-05  Score=62.96  Aligned_cols=119  Identities=8%  Similarity=0.079  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH-HHH
Q 019984          156 WGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL-STV  234 (333)
Q Consensus       156 ~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l-~~~  234 (333)
                      .|+++++++.++.+...++-|+=.++.+.  .+.... ..       ..+.           ...+|..+   +++ .++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~-~~-------~~~~-----------~~~~p~~~---i~lgl~~   57 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD-FI-------AALL-----------AFGLALRA---VLLGLAG   57 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH-HH-------HHHH-----------HHhccHHH---HHHHHHH
Confidence            37888888999888888887766554431  111000 00       0000           00122111   223 334


Q ss_pred             HHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhh--hccCCCcccccchhhhhhhhhhhhhhh
Q 019984          235 ATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCV--WFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       235 ~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~--~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ..++..++.+++++.+...+..+..+..+...+.++.  +|||++|+.+++|+++++.|+.+....
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4456678888999999999999988888888888885  899999999999999999999886643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.19  E-value=3.9e-05  Score=69.56  Aligned_cols=140  Identities=13%  Similarity=0.126  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984          154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  233 (333)
Q Consensus       154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~  233 (333)
                      ..-|+++.+.+-+.+|+.-.+.+-+ +  ..++.|+..+--+++.++.+..+...++..+-.+ ..++|+.+......+.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~   80 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTAL   80 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHH
Confidence            3469999999999999999888544 4  4688999999999999888777666655433322 3456665543332222


Q ss_pred             HHHHHHH-HHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          234 VATTSQF-FISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       234 ~~~l~~~-~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      . ...|. .+.+++.+-..+.+|+--.+.|.+.+++|.++++|+++..||+..++...|+....+.
T Consensus        81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            2 12443 3334788888999999999999999999999999999999999999999998776654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.18  E-value=2.6e-05  Score=70.62  Aligned_cols=116  Identities=12%  Similarity=0.082  Sum_probs=85.3

Q ss_pred             hhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH-HHHHHHHHHHHHHH
Q 019984          169 GFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST-VATTSQFFISYTIR  247 (333)
Q Consensus       169 a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~-~~~l~~~~~~~~i~  247 (333)
                      |...+..|...+. ..++.+..++-.+.+.+++.+.....           ...+.+...+..+. ...+.+.+.+++++
T Consensus         2 g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~   69 (260)
T TIGR00950         2 GTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVK   69 (260)
T ss_pred             cchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555555543 46788888888887777666543222           11122333344433 34566678888999


Q ss_pred             hhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          248 TFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       248 ~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +.++...+++..+.|+++.+++.++++|++++.+++|+.+.+.|+.+..
T Consensus        70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence            9999999999999999999999999999999999999999999977754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.17  E-value=5.6e-05  Score=70.11  Aligned_cols=127  Identities=15%  Similarity=0.101  Sum_probs=94.3

Q ss_pred             HHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHH-HHH
Q 019984          160 LMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVA-TTS  238 (333)
Q Consensus       160 l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~-~l~  238 (333)
                      +.++-.+.+|...+..|....  +.+|.+..++-..++.+++++....++.-.       ...+.+......+... ..+
T Consensus        12 ~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272         12 ALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPL-------PTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcHHHHHHHHHHHHHHHHHH
Confidence            345556788998888876655  689999999999998888777654443210       1122344444444443 344


Q ss_pred             HHHHHHHH-HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          239 QFFISYTI-RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       239 ~~~~~~~i-~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +.+.+.+. ++.++...++...+.|+++.+++.+ ++|+++..+++|..+.+.|+.+-.
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence            55666777 8999999999999999999999985 799999999999999999977654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.03  E-value=0.00011  Score=68.56  Aligned_cols=131  Identities=11%  Similarity=0.018  Sum_probs=96.6

Q ss_pred             hhhHHHHHHHHhcCCCC--hHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHH
Q 019984          169 GFTSTFQDKLFKGYDME--IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI  246 (333)
Q Consensus       169 a~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i  246 (333)
                      ..+++.||++.++...+  +.-+.+.......+...+.....+...       .....+...+..+++..++..+.+.++
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-------SRKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-------CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            34668899998875444  666666666666665555443333000       111123344555777777778888999


Q ss_pred             HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCC
Q 019984          247 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPR  306 (333)
Q Consensus       247 ~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~  306 (333)
                      ++.+--+..+.-..+++.++++++++++++.+..++++..++..|+.+....+.++++..
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~  145 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS  145 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence            999999999999999999999999999999999999999999999998887765544433

; GO: 0055085 transmembrane transport

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.01  E-value=0.00012  Score=68.12  Aligned_cols=123  Identities=11%  Similarity=0.085  Sum_probs=87.8

Q ss_pred             hhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHH
Q 019984          167 FDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTI  246 (333)
Q Consensus       167 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i  246 (333)
                      ++...++++|.+++.+ ..|..+.+....++.+...+. ...+....    ...+.+.|..++..+++..+.+.+.+.++
T Consensus        13 ~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~l   86 (302)
T TIGR00817        13 LNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGLPKR----LKISSALLKLLLPVAIVHTIGHVTSNVSL   86 (302)
T ss_pred             HHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344456778877753 356666666555555443332 11111000    00123456666677777777778888999


Q ss_pred             HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          247 RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       247 ~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      +++++...+++..+.|+++.+++.++++|+++..+++|.+++++|+.+.
T Consensus        87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999998654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.95  E-value=0.0002  Score=68.32  Aligned_cols=133  Identities=8%  Similarity=-0.013  Sum_probs=95.2

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCCCC-hHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHH
Q 019984          159 SLMVGYLGFDGFTSTFQDKLFKGYDME-IHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATT  237 (333)
Q Consensus       159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l  237 (333)
                      .+++.--.++...+.+.|.+++..  + |+.+.....+++.+++.+... .+. .+..++ ......+..++.+++++..
T Consensus        52 ~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~-~~~-~~~~~~-~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         52 LLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWA-TGF-RKIPRI-KSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCC-CCHHHHHHHHHHHHHHHHH
Confidence            334444445566678888888754  4 888888877777665443321 111 000001 0012345566777888877


Q ss_pred             HHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          238 SQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      ++...+.+++..++...+++..+.|+++++++.++++|+++..+++|.+++++|+.+..
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            77666788999999999999999999999999999999999999999999999987754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.94  E-value=0.00017  Score=66.95  Aligned_cols=128  Identities=5%  Similarity=-0.051  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  236 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  236 (333)
                      ++++++.+.+++|...+..|...+  +.+|....++-...+.+++++..  ..  +. .   .+.+  +..++..++...
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~--~~--~~-~---~~~~--~~~~~~~~l~~~   72 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV--GF--PR-L---RQFP--KRYLLAGGLLFV   72 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc--cc--cc-c---cccc--HHHHHHHhHHHH
Confidence            456677888899999888887665  47888888888777776665432  11  00 0   0111  112222222222


Q ss_pred             HHHHHHHHHH----HhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          237 TSQFFISYTI----RTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       237 l~~~~~~~~i----~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      ..+.+.+..+    +..++.+.+++..+.|+++.++++++++|+++..+|+|+++.+.|+.+-.
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~  136 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL  136 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence            3334444444    45678888999999999999999999999999999999999999986654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.93  E-value=0.00024  Score=66.11  Aligned_cols=123  Identities=11%  Similarity=-0.022  Sum_probs=87.7

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHH
Q 019984          159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTS  238 (333)
Q Consensus       159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~  238 (333)
                      .+.+++.+++|...+..|...+  +.+|....++-..++.+..++......           .  .+..++..++....+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~~-----------~--~~~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARPK-----------V--PLNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCCC-----------C--chHHHHHHHHHHHHH
Confidence            3466778899999999987665  578999888888776654443321110           1  111222334433333


Q ss_pred             H-HHHHHHHHh-hChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          239 Q-FFISYTIRT-FGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       239 ~-~~~~~~i~~-~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      + .+.+..+++ .++...+++..+.|+++.++++++++|+++..+++|.++.+.|+.+-.
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            3 355567776 577888999999999999999999999999999999999999976554

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.73  E-value=0.00018  Score=56.93  Aligned_cols=59  Identities=7%  Similarity=0.102  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      +..++..+++++.+...+-....+.++.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus        49 l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         49 LAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            45567777899999999998888999999999999999999999999999999997653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.71  E-value=0.00047  Score=63.98  Aligned_cols=131  Identities=14%  Similarity=0.029  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  236 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  236 (333)
                      |+++++++++++|...+..|++.   +.++.+.+.  ..++.++........+..    ..  +.+..+..-+..+..=.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~~--~~~~~~~~g~l~G~~w~   70 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----EF--WALSIFLVGLLSGAFWA   70 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----cc--cccHHHHHHHHHHHHHH
Confidence            57788899999999999997754   455555442  233333332222121110    00  12333332223344445


Q ss_pred             HHHHHHHHHHHhhChhHHHHHHH-HHHHHHHHhHhhhccCCCcccc----cchhhhhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRHPLSWEQ----CIGSIIVFGALYTRSFF  298 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt~sv~~~-l~~v~sills~~~fge~~t~~~----~iG~~lvl~Gv~~~~~~  298 (333)
                      .+|++++.++++.|....-.+.+ +.++.+.+.+.++|||+.+..+    ++|.++++.|+.+....
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            78899999999999998877777 8888999999999999999999    99999999998776433

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.69  E-value=0.0002  Score=61.28  Aligned_cols=174  Identities=10%  Similarity=0.149  Sum_probs=111.8

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEI  186 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~  186 (333)
                      +++++.+|.|+...+++++++...|+++..+.|.  +       ....+.|+.+.+.|++..|+|-+..|+....-+.  
T Consensus        95 iLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~-------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~--  163 (290)
T KOG4314|consen   95 ILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--E-------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANF--  163 (290)
T ss_pred             HHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--h-------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc--
Confidence            8899999999999999999999999999988742  2       1468899999999999999999999887764322  


Q ss_pred             HHHHHHhhHHHH---HH-HHHH--HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHH
Q 019984          187 HNQIFYTTLCSC---VL-SLSG--LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT  260 (333)
Q Consensus       187 ~~~~~~~~~~~~---~~-~~~~--~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l  260 (333)
                      -+...+++..+.   ++ ..|.  +.++|-  +.++-.  ....|..+...+..+..-++.+...+....|...|+-+..
T Consensus       164 Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V--E~~qsF--A~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~  239 (290)
T KOG4314|consen  164 GDAAHFMSCLGFFNLCFISFPALILAFTGV--EHLQSF--AAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLC  239 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHhhhHHHHHHhch--HHHHHH--hhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehhee
Confidence            122222222222   21 1222  334442  111111  1122444333333333334455556777788877776666


Q ss_pred             HHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          261 RQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       261 ~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      .--....+..++=+-..+.....|..++..|..+-
T Consensus       240 ~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  240 GIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            65566666666555567888888888888885443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.53  E-value=0.0004  Score=62.74  Aligned_cols=71  Identities=11%  Similarity=0.174  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984          232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  302 (333)
Q Consensus       232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~  302 (333)
                      +++..+.+...+.++++.+|.+..+....|-+++.++++++++++++..||++..+.+.|+.+........
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            55555667889999999999999999999999999999999999999999999999999998877665544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.52  E-value=0.0018  Score=61.01  Aligned_cols=75  Identities=12%  Similarity=0.269  Sum_probs=67.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          224 CFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       224 ~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      .|+..+.++++-+.++++...+.+.++.+..++.....-++++++|+++++++.++.|++|+.++++|+.+....
T Consensus        78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            344455568888899999999999999999999999999999999999999999999999999999998776554

Some of the sequences in this family are annotated as putative membrane proteins.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.49  E-value=0.0043  Score=56.45  Aligned_cols=141  Identities=12%  Similarity=0.014  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984          154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  233 (333)
Q Consensus       154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~  233 (333)
                      ...+....+...+.++......+..... ..+.....+....++.+...+.......  .  .. ......+...+.-.+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~~~~~~~~   78 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPR--G--LR-PALRPWLLLLLLALL   78 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcc--c--cc-ccccchHHHHHHHHH
Confidence            4556666666667778877777665543 2344444444555544442222111110  0  00 011111222222244


Q ss_pred             HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHh-hhccCCCcccccchhhhhhhhhhhhhhhcc
Q 019984          234 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSC-VWFRHPLSWEQCIGSIIVFGALYTRSFFKK  300 (333)
Q Consensus       234 ~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~-~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~  300 (333)
                      ....++.+++..+++.++...++...+.|+++.+++. ++++|+++..+++|..+.+.|+.+......
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            5556667888899999999999999999999999996 777999999999999999999887665443

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.42  E-value=0.00065  Score=54.22  Aligned_cols=83  Identities=10%  Similarity=0.026  Sum_probs=54.5

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCchhhHHHHHHHHHhhhhhhHH-----------------------H
Q 019984           54 YSLFLVFCNRLMTSAVSAGTLIASRKAIDP---VAPVYKYCLVSMSNILTTTCQYE-----------------------I  107 (333)
Q Consensus        54 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~y~~~s~~~~~a~~~~~~-----------------------l  107 (333)
                      .|.|-+++|.++..+...+.....++...+   ....+.|...|=.....++.-|.                       +
T Consensus        30 dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~l  109 (140)
T COG2510          30 DPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVL  109 (140)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHH
Confidence            577889999888887776665554432222   11223444333222222222111                       8


Q ss_pred             HHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984          108 WGTLIMQKRYKGYDYFLALLVTLGCSIFI  136 (333)
Q Consensus       108 l~~l~~~~k~s~~~~l~vlli~~Gv~l~~  136 (333)
                      ++++++|||++..+|++++++++|+++.+
T Consensus       110 ls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510         110 LSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999988764

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.34  E-value=0.0043  Score=58.63  Aligned_cols=145  Identities=11%  Similarity=0.080  Sum_probs=93.1

Q ss_pred             chHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHH--HHHH---HHHhcCchhHHHHhhhhChHhHHH
Q 019984          153 NTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCV--LSLS---GLILEGHLFLAIDFVYHHLDCFFD  227 (333)
Q Consensus       153 ~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~g~~~~~~~~~~~~~~~~~~  227 (333)
                      +...|+++++++.+|++-..+-+|+ .++.   ++|.. +. ..+..  +..|   ..+..++..+.+.  +.++..+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w---~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~--~~~~~~~~~   75 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW---SWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYS--SFSGSTLLP   75 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCC---chhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHH--hcCHHHHHH
Confidence            4678999999999999999988876 4433   35544 33 22221  1122   1222233322221  135555554


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhChhHH-HHHHHHHHHHHHHhHhhhccCC---Cc----ccccchhhhhhhhhhhhhhhc
Q 019984          228 VALLSTVATTSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHP---LS----WEQCIGSIIVFGALYTRSFFK  299 (333)
Q Consensus       228 il~l~~~~~l~~~~~~~~i~~~~alt~-sv~~~l~~v~sills~~~fge~---~t----~~~~iG~~lvl~Gv~~~~~~k  299 (333)
                      -++.+..=.+||+..+..+++.|-... .+..-+.-+.+.+++.+++||=   ++    ....+|.++++.|+.+..+.-
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            444566666899999999999986554 4455567789999999999852   23    335778889999999988865


Q ss_pred             cccCCC
Q 019984          300 KVSEKP  305 (333)
Q Consensus       300 ~~~~~~  305 (333)
                      .+|+++
T Consensus       156 ~~k~~~  161 (345)
T PRK13499        156 QLKERK  161 (345)
T ss_pred             hhcccc
Confidence            544443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.34  E-value=0.00082  Score=53.14  Aligned_cols=30  Identities=20%  Similarity=0.290  Sum_probs=28.0

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFI  136 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~  136 (333)
                      +++++++||+++++++++++++++|+++..
T Consensus        96 i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   96 ILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            888999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.15  E-value=0.015  Score=47.73  Aligned_cols=129  Identities=15%  Similarity=0.187  Sum_probs=87.6

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH-HHHHHH
Q 019984          159 SLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL-STVATT  237 (333)
Q Consensus       159 ~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l-~~~~~l  237 (333)
                      ++.+.+-++-+++...+-++.++.+ ||+...+.+...+++.+....+..++.  ........|  |+  .++ ++++.+
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p--~w--~~lGG~lG~~   76 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP--WW--AYLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC--hH--HhccHHHHHH
Confidence            3445555566777777777766544 588888888888888777765555442  111111122  22  223 667766


Q ss_pred             HHHHHHHHHHhhChhHHHHHHHHHH-HHHHHhHhh-hcc---CCCcccccchhhhhhhhhhh
Q 019984          238 SQFFISYTIRTFGALTFATIMTTRQ-LVSIVLSCV-WFR---HPLSWEQCIGSIIVFGALYT  294 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt~sv~~~l~~-v~sills~~-~fg---e~~t~~~~iG~~lvl~Gv~~  294 (333)
                      .-.+..+++++.|+.+.......-+ +.++++..+ +||   +++++...+|.++++.|+.+
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            6677778899999998888777744 567777776 443   68999999999999999763

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.12  E-value=0.013  Score=54.22  Aligned_cols=125  Identities=7%  Similarity=-0.028  Sum_probs=87.2

Q ss_pred             hHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984          154 TVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLST  233 (333)
Q Consensus       154 ~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~  233 (333)
                      ...|..+++++.++++......|...+  ..+|.+..++-..++.+++++.......     .   .+++.+...+..+.
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~-----~---~~~~~~~~~~~~g~   79 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRL-----R---FAKEQRLPLLFYGV   79 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhc-----c---CCHHHHHHHHHHHH
Confidence            467899999999999999998887776  3688999999999987766654311110     0   12334444445555


Q ss_pred             HHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984          234 VATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  294 (333)
Q Consensus       234 ~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~  294 (333)
                      +....+.+.++++++.++...+++..+.|+++.+++.    |++..  +.+.++.+.|+.+
T Consensus        80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~l  134 (293)
T PRK10532         80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWF  134 (293)
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHhe
Confidence            5556667888899999999999999999999998872    43332  3344455555544

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.04  E-value=0.00056  Score=63.70  Aligned_cols=79  Identities=16%  Similarity=0.245  Sum_probs=49.5

Q ss_pred             hChHhHHHHHHHHHHHHHHH-HHHHHHHHhhChhHHHHHHH-HHHHHHHHhHhhhccC--CCccccc----chhhhhhhh
Q 019984          220 HHLDCFFDVALLSTVATTSQ-FFISYTIRTFGALTFATIMT-TRQLVSIVLSCVWFRH--PLSWEQC----IGSIIVFGA  291 (333)
Q Consensus       220 ~~~~~~~~il~l~~~~~l~~-~~~~~~i~~~~alt~sv~~~-l~~v~sills~~~fge--~~t~~~~----iG~~lvl~G  291 (333)
                      .+|..|..++.+ +...+.| .+...++++++++....+.. .=...+++-|.++|+|  ..++.++    .|..+++.|
T Consensus       208 ~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G  286 (300)
T PF05653_consen  208 TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG  286 (300)
T ss_pred             hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence            455555443333 3445666 46677999998865443332 3445788889999997  4566444    466677788


Q ss_pred             hhhhhhhc
Q 019984          292 LYTRSFFK  299 (333)
Q Consensus       292 v~~~~~~k  299 (333)
                      +++-+..|
T Consensus       287 V~lL~~~~  294 (300)
T PF05653_consen  287 VFLLSSSK  294 (300)
T ss_pred             hheeeccC
Confidence            87755443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.03  E-value=0.0042  Score=49.68  Aligned_cols=62  Identities=16%  Similarity=0.180  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHhhChhH-HHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt-~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      +..++...++++.+-.. .++..-+--+.+.++|+++|||++|+.+++|+++++.|+..-...
T Consensus        42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            44456666777777543 444456788889999999999999999999999999998765433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.86  E-value=0.015  Score=45.91  Aligned_cols=61  Identities=15%  Similarity=0.234  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHhhChhH-HHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          238 SQFFISYTIRTFGALT-FATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       238 ~~~~~~~~i~~~~alt-~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ...+...++++.+-.. .++-.-+.-+.+.++|+++|||++|+.+++|+++++.|+..-...
T Consensus        43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3345555777777543 445566788899999999999999999999999999998776443

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.85  E-value=0.0068  Score=47.85  Aligned_cols=33  Identities=15%  Similarity=0.302  Sum_probs=31.1

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  139 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~  139 (333)
                      +++++++|||.+++++++++++++|+++...++
T Consensus        76 ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   76 LLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            889999999999999999999999999998873

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.70  E-value=0.013  Score=53.38  Aligned_cols=117  Identities=17%  Similarity=0.151  Sum_probs=79.6

Q ss_pred             CCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHH-
Q 019984          182 YDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTT-  260 (333)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l-  260 (333)
                      .+-+|.++.+.+.+-+.++.+...++..+..+      .++..+..-+..+++=.+||...|...++.|-.++-.+++- 
T Consensus         8 ~gG~~~~Q~lG~t~Gali~alv~~~~~~p~~~------~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~   81 (269)
T PF06800_consen    8 IGGKPANQILGTTIGALIFALVVFLFRQPAFS------MSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGL   81 (269)
T ss_pred             eCCcHHHHHHHHHHHHHHHHHHHHHHhCCCcc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhH
Confidence            35578888888877776666555444332110      12234433344466667899999999999998888877765 


Q ss_pred             HHHHHHHhHhhhccCCCcccccc----hhhhhhhhhhhhhhhccccCC
Q 019984          261 RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKKVSEK  304 (333)
Q Consensus       261 ~~v~sills~~~fge~~t~~~~i----G~~lvl~Gv~~~~~~k~~~~~  304 (333)
                      +-+.+.++++++|||--+..+++    +.++++.|+.+.++.++++++
T Consensus        82 QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   82 QLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            55568999999999977766544    566677899888766554443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.62  E-value=0.034  Score=43.73  Aligned_cols=59  Identities=10%  Similarity=0.173  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      +..++...++|+.+- +..++-.-+--+.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus        47 ~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         47 AAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            334455557777775 45567777788899999999999999999999999999998653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.51  E-value=0.011  Score=55.01  Aligned_cols=120  Identities=13%  Similarity=0.051  Sum_probs=82.2

Q ss_pred             cchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHH
Q 019984          152 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALL  231 (333)
Q Consensus       152 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l  231 (333)
                      .+..+|+.+.+.+.++.+...++||+-..|.+.+...                   .++  ...++. .+| .|+.  .+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~-------------------~~~--~~~~~l-~~~-~W~~--G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR-------------------AGS--GGRSYL-RRP-LWWI--GL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-------------------ccc--hhhHHH-hhH-HHHH--HH
Confidence            3578999999999999999999999876543211100                   000  000010 122 2222  11


Q ss_pred             HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhh
Q 019984          232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~  297 (333)
                      . ...+|+...+.++...++...+..+.+.-+++.+++.+++||+++...++|.++++.|..+-..
T Consensus        58 ~-~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   58 L-LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             H-HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            1 1234555556677777888889899999999999999999999999999999999998665443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.48  E-value=0.11  Score=48.79  Aligned_cols=111  Identities=15%  Similarity=0.159  Sum_probs=76.1

Q ss_pred             CChHHHHHHhhHHHHHHHHHHHHhcCch--hHHHHhhhhChHh---HHHHHHHHHHHHH---HHHHHHHHHHhhChhHHH
Q 019984          184 MEIHNQIFYTTLCSCVLSLSGLILEGHL--FLAIDFVYHHLDC---FFDVALLSTVATT---SQFFISYTIRTFGALTFA  255 (333)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~---~~~il~l~~~~~l---~~~~~~~~i~~~~alt~s  255 (333)
                      ..|....+.+-++-.+++...++.+...  ....+.  .+++.   +...+-.++.+.+   =|...|.++.+.+|.|..
T Consensus        45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~--l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyq  122 (345)
T KOG2234|consen   45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKS--LSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQ  122 (345)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhh--cCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhh
Confidence            4555666666666666665554444211  111010  11111   2233444544443   335677789999999999


Q ss_pred             HHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          256 TIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       256 v~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +...+|-..+.++++++++++++..||....+-++|+.+.+
T Consensus       123 Vt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen  123 VTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999998877

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.42  E-value=0.02  Score=44.71  Aligned_cols=59  Identities=7%  Similarity=0.142  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTR  295 (333)
Q Consensus       237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~  295 (333)
                      +..++...++|+.+- +..++-.-+--+.+.++|+++|||++|+.+++|+++++.|+..-
T Consensus        41 ~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         41 VSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            344555567777775 45667777888999999999999999999999999999997664

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.30  E-value=0.051  Score=42.25  Aligned_cols=60  Identities=13%  Similarity=0.261  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      +...+.-.++|+.+- +..++-+-.--+.+.+.|+++|+|++++.+++|++++++|+..-.
T Consensus        42 ~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          42 LSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            334455567888775 456777778888999999999999999999999999999986544

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.10  E-value=0.002  Score=57.84  Aligned_cols=68  Identities=12%  Similarity=0.213  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984          232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  299 (333)
Q Consensus       232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k  299 (333)
                      ++.++.|-+.+||++.+.+-.-+++++...|++++++++++++||.|....+|..+.+.|+.+....+
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            78888888899999999999999999999999999999999999999999999999999988866543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.92  E-value=1.1  Score=42.61  Aligned_cols=189  Identities=13%  Similarity=0.024  Sum_probs=96.0

Q ss_pred             HHHHHHhCccc---C----chhHHHHHHHHHhhHHhhccCCCCCCCCCC--CCCcchHHHHHHHHHHHHhhhhhH-----
Q 019984          107 IWGTLIMQKRY---K----GYDYFLALLVTLGCSIFILFPSGADLSPYS--KGRENTVWGVSLMVGYLGFDGFTS-----  172 (333)
Q Consensus       107 ll~~l~~~~k~---s----~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~--~~~~~~~~G~~l~l~s~~~~a~~~-----  172 (333)
                      +++.++++|-.   +    ..-.++++++++|+++.......+|.+...  +++.+...|+.+++++.+.++.++     
T Consensus       116 L~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~  195 (345)
T PRK13499        116 LMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDA  195 (345)
T ss_pred             HHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhh
Confidence            56666666432   2    335678899999999998832211211110  122456789999999999999988     


Q ss_pred             --HHHHHHHhcCCCChHHHHHHhhH---HHHH-HHHHHHHh---cCc-hhHHHHhhhhChHhHHHHHHHHHHH---HHHH
Q 019984          173 --TFQDKLFKGYDMEIHNQIFYTTL---CSCV-LSLSGLIL---EGH-LFLAIDFVYHHLDCFFDVALLSTVA---TTSQ  239 (333)
Q Consensus       173 --~~~~~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~---~g~-~~~~~~~~~~~~~~~~~il~l~~~~---~l~~  239 (333)
                        ...+... ..+.++.....-...   ++.. ..+.+...   .++ .....++....+..+...+.-.+.+   .+++
T Consensus       196 ~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~  274 (345)
T PRK13499        196 GKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQF  274 (345)
T ss_pred             ccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHH
Confidence              4443321 124444322222211   1111 11111111   111 1000011000111133322223333   3444


Q ss_pred             HHHHHHHHhhChhHHH----HHHHHHHHHHHHhHhhhccCCCc------ccccchhhhhhhhhhhhhh
Q 019984          240 FFISYTIRTFGALTFA----TIMTTRQLVSIVLSCVWFRHPLS------WEQCIGSIIVFGALYTRSF  297 (333)
Q Consensus       240 ~~~~~~i~~~~alt~s----v~~~l~~v~sills~~~fge~~t------~~~~iG~~lvl~Gv~~~~~  297 (333)
                      .++...-.+.|.....    +...+--+++.+.++ +++|.=+      ...++|.++++.|..+-.+
T Consensus       275 ~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        275 FFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            5555555666444333    333556678888888 4999766      4568899998888766544

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.68  E-value=0.03  Score=42.66  Aligned_cols=52  Identities=15%  Similarity=0.243  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHhhChhHH-HHHHHHHHHHHHHhHhhhccCCCcccccchhhhh
Q 019984          237 TSQFFISYTIRTFGALTF-ATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIV  288 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt~-sv~~~l~~v~sills~~~fge~~t~~~~iG~~lv  288 (333)
                      ++.++...++|+.+...+ .+..-+-.+.+.++|+++|||++|+.+++|+.++
T Consensus        41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444566678888776555 5566688899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.31  E-value=0.47  Score=39.38  Aligned_cols=133  Identities=13%  Similarity=0.167  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHH-hcCchhHHHHhhhhChHhHHHHHHHHH
Q 019984          155 VWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLI-LEGHLFLAIDFVYHHLDCFFDVALLST  233 (333)
Q Consensus       155 ~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~il~l~~  233 (333)
                      .+..++.+++-++-.+++...-++.+..+ +|.--.+..+..++..+....+ .++...  .......  .|+.  +.  
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~--~a~~~~~--pwW~--~~--   74 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPG--LAAVASA--PWWA--WI--   74 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCc--hhhccCC--chHH--HH--
Confidence            34555666666777777777777765444 6777777777777776665533 333321  1221122  2332  11  


Q ss_pred             HHHHHHHHHHH---HHHhhChhHHHHHHHH-HHHHHHHhHhhhcc----CCCcccccchhhhhhhhhhhhh
Q 019984          234 VATTSQFFISY---TIRTFGALTFATIMTT-RQLVSIVLSCVWFR----HPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       234 ~~~l~~~~~~~---~i~~~~alt~sv~~~l-~~v~sills~~~fg----e~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      .+.+|..+++.   ...+.|+.++...... +-+.++++.-+=+.    ++++...++|++++++|+++..
T Consensus        75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            12334444444   4578888777666555 44567777766333    5789999999999999965543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=94.74  E-value=0.4  Score=39.33  Aligned_cols=29  Identities=7%  Similarity=0.229  Sum_probs=26.6

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF  135 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~  135 (333)
                      ++++++++++++..++.++++.++|+.+-
T Consensus       123 ~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen  123 LLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            78999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.50  E-value=0.059  Score=50.83  Aligned_cols=81  Identities=4%  Similarity=0.101  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhccccCCCCCC
Q 019984          229 ALLSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVSEKPRPS  308 (333)
Q Consensus       229 l~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~~~~~~~  308 (333)
                      ++++..=+++|++...+++.++....++++...-++++.++.++-+|++|+...++.++-++|+.+.+..+.+++...++
T Consensus       163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a  242 (416)
T KOG2765|consen  163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA  242 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence            33444445667777788999999999999999999999999999999999999999999999999888876666544443


Q ss_pred             C
Q 019984          309 E  309 (333)
Q Consensus       309 ~  309 (333)
                      +
T Consensus       243 ~  243 (416)
T KOG2765|consen  243 S  243 (416)
T ss_pred             c
Confidence            3

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=94.21  E-value=0.14  Score=46.49  Aligned_cols=68  Identities=21%  Similarity=0.242  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhh-hccCC-----CcccccchhhhhhhhhhhhhhhccccCC
Q 019984          237 TSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCV-WFRHP-----LSWEQCIGSIIVFGALYTRSFFKKVSEK  304 (333)
Q Consensus       237 l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~-~fge~-----~t~~~~iG~~lvl~Gv~~~~~~k~~~~~  304 (333)
                      .|+.+..-.+++.|- +-..+-++..-+.....|-+ +||.+     -.+.+++|+++++.|..++...|...++
T Consensus        67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~  141 (254)
T PF07857_consen   67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKE  141 (254)
T ss_pred             cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCC
Confidence            455555555555552 22223333344444444433 56643     3567899999999988888877765543

The region concerned is approximately 280 residues long.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.03  E-value=0.032  Score=49.70  Aligned_cols=132  Identities=14%  Similarity=0.030  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHH
Q 019984          157 GVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVAT  236 (333)
Q Consensus       157 G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~  236 (333)
                      +++++++-++.|+.......    +.+-+|.++...+.+-+.++.+...++..+.        .++..+..-+..+..=.
T Consensus         3 ~~liaL~P~l~WGsip~v~~----k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws   70 (288)
T COG4975           3 DLLIALLPALGWGSIPLVAN----KFGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS   70 (288)
T ss_pred             hHHHHHHHHHHhcccceeee----ecCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence            34555666667777665543    3455788888888877766665554332211        12222222122234445


Q ss_pred             HHHHHHHHHHHhhChhHHHHHHHH-HHHHHHHhHhhhccCCCcccccc----hhhhhhhhhhhhhhhcc
Q 019984          237 TSQFFISYTIRTFGALTFATIMTT-RQLVSIVLSCVWFRHPLSWEQCI----GSIIVFGALYTRSFFKK  300 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt~sv~~~l-~~v~sills~~~fge~~t~~~~i----G~~lvl~Gv~~~~~~k~  300 (333)
                      +||...|.+++..|..++..+++- +-+-+.+++++.|||=-+..|.+    ..++++.|+++.++.++
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            789999999998888888777665 55678899999999977766643    44556678887765443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.03  E-value=0.099  Score=41.23  Aligned_cols=30  Identities=7%  Similarity=0.011  Sum_probs=28.1

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFI  136 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~  136 (333)
                      +++++++|||.++++++++.++++|+++..
T Consensus        79 ~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         79 LAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999998765

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.96  E-value=0.81  Score=42.21  Aligned_cols=127  Identities=12%  Similarity=0.096  Sum_probs=92.2

Q ss_pred             hhhHHHHHHHHhc-CC------CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHH
Q 019984          169 GFTSTFQDKLFKG-YD------MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFF  241 (333)
Q Consensus       169 a~~~~~~~~l~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~  241 (333)
                      -..+++|||+..+ |+      -++.-+.+.+++.+.+.....+-....       ...++..|+...+.++.+.++..+
T Consensus        27 l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-------~~~~~apl~~y~~is~tn~~s~~~   99 (327)
T KOG1581|consen   27 LTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKK-------ELSGVAPLYKYSLISFTNTLSSWC   99 (327)
T ss_pred             HHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccc-------cCCCCCchhHHhHHHHHhhcchHH
Confidence            3457889998754 42      133345555555555544332211110       012344555556668888888889


Q ss_pred             HHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984          242 ISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  302 (333)
Q Consensus       242 ~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~  302 (333)
                      .+-++|+.+=-|-.+.-..|-+-.++.+.++.+.+.++...+-..+|-.|+.+..+.+..+
T Consensus       100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen  100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            9999999999999999999999999999999999999999999999999988888876655

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=93.69  E-value=1  Score=35.48  Aligned_cols=32  Identities=13%  Similarity=0.109  Sum_probs=29.8

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      ++++++++|+.++.+++++.++++|+++....
T Consensus        73 l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         73 LLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            77999999999999999999999999998765

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.67  E-value=0.15  Score=40.31  Aligned_cols=60  Identities=5%  Similarity=0.050  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHhhChhHHHHH-HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhh
Q 019984          235 ATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYT  294 (333)
Q Consensus       235 ~~l~~~~~~~~i~~~~alt~sv~-~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~  294 (333)
                      +-.|...+++.+.+.+-+....+ +.+.=+++.+.++++.+|..+...++|+++++.|+.+
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            33455677778888886666655 5788899999998888888899999999999999865

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.67  E-value=0.79  Score=42.62  Aligned_cols=171  Identities=13%  Similarity=0.208  Sum_probs=93.2

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccCCCCCCCCCCCCCcch------HHHHHH---HHHHHHhhhhhHHHHHH
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFPSGADLSPYSKGRENT------VWGVSL---MVGYLGFDGFTSTFQDK  177 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~------~~G~~l---~l~s~~~~a~~~~~~~~  177 (333)
                      +++..+++||.++...++..++++|-.+...+.++.+ +. .  +...      -.|++.   .+.-.++     +..-.
T Consensus       106 ila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~-~i-~--t~~el~~~~~~~~Fliy~~~iil~~~-----il~~~  176 (335)
T KOG2922|consen  106 ILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ-EI-E--SVEEVWELATEPGFLVYVIIIILIVL-----ILIFF  176 (335)
T ss_pred             HHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc-cc-c--cHHHHHHHhcCccHHHHHHHHHHHHH-----HHhee
Confidence            7888999999999999999999999887777643211 10 0  0000      012211   1111010     11101


Q ss_pred             HHhcCCCChHHHHHHhhHHHHHHHHHH-----------HHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHH-HHHHHH
Q 019984          178 LFKGYDMEIHNQIFYTTLCSCVLSLSG-----------LILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQ-FFISYT  245 (333)
Q Consensus       178 l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~-~~~~~~  245 (333)
                      ...+++  ..+++-|..+.+.+-.+-.           ..+.|..    +  ..+|..|..++.+..+ +..| .....+
T Consensus       177 ~~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~----q--l~~~~ty~~~l~~~~~-~~~Q~~yLNkA  247 (335)
T KOG2922|consen  177 YAPRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN----Q--LFYPLTWIFLLVVATC-VSTQMNYLNKA  247 (335)
T ss_pred             eccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc----c--cccHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            111233  2345566666655432111           1122211    1  1345444433333333 3445 356668


Q ss_pred             HHhhChhHHHHHHHH-HHHHHHHhHhhhccC--CCcccc----cchhhhhhhhhhhh
Q 019984          246 IRTFGALTFATIMTT-RQLVSIVLSCVWFRH--PLSWEQ----CIGSIIVFGALYTR  295 (333)
Q Consensus       246 i~~~~alt~sv~~~l-~~v~sills~~~fge--~~t~~~----~iG~~lvl~Gv~~~  295 (333)
                      ++.+++...+.+... -..++++.|.++|+|  ..+..+    ..|...++.|+++-
T Consensus       248 L~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL  304 (335)
T KOG2922|consen  248 LDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLL  304 (335)
T ss_pred             HHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEe
Confidence            998888777665544 677899999999997  455554    45667777887765

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=92.20  E-value=2.9  Score=39.39  Aligned_cols=146  Identities=12%  Similarity=0.099  Sum_probs=79.2

Q ss_pred             cchHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCChHHHHHH-hhHHHHHHHHHHH---HhcCchhHHHHhhhhCh-HhHH
Q 019984          152 ENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFY-TTLCSCVLSLSGL---ILEGHLFLAIDFVYHHL-DCFF  226 (333)
Q Consensus       152 ~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~-~~~~  226 (333)
                      ..-+.|+++..++.++.+...+=.||. |+  .+ +|.+-. ..+++.++ +|.+   +...+..   +.....| ..+.
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~--Ws-WEs~Wlv~gi~swli-~P~~~a~l~ip~~~---~i~~~~~~~~l~   74 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KG--WS-WESYWLVQGIFSWLI-VPWLWALLAIPDFF---SIYSATPASTLF   74 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CC--cc-HHHHHHHHHHHHHHH-HHHHHHHHhCCcHH---HHHHhCChhHHH
Confidence            346789999988888888877777664 32  23 443333 34444433 3432   1222322   2222333 3343


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCh-hHHHHHHHHHHHHHHHhHhhhc-------cCCCcccccchhhhhhhhhhhhhhh
Q 019984          227 DVALLSTVATTSQFFISYTIRTFGA-LTFATIMTTRQLVSIVLSCVWF-------RHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       227 ~il~l~~~~~l~~~~~~~~i~~~~a-lt~sv~~~l~~v~sills~~~f-------ge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ...++++.=-+|.+.+-.++++.|- +..++..-+--++..++--++.       +.+-...-++|.++++.|+.+..+.
T Consensus        75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            4444444433555555556777663 3344444444444444433332       2333446788999999999988877


Q ss_pred             ccccCCC
Q 019984          299 KKVSEKP  305 (333)
Q Consensus       299 k~~~~~~  305 (333)
                      -.+|+|.
T Consensus       155 G~~Ke~~  161 (344)
T PF06379_consen  155 GSMKEKE  161 (344)
T ss_pred             HHhhhhh
Confidence            5555443

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=91.30  E-value=0.37  Score=45.09  Aligned_cols=129  Identities=9%  Similarity=-0.002  Sum_probs=80.5

Q ss_pred             HHHhhhhhHHHHHHHHhcCC-CChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHH
Q 019984          164 YLGFDGFTSTFQDKLFKGYD-MEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFI  242 (333)
Q Consensus       164 s~~~~a~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~  242 (333)
                      .-++....+++.|+++++++ ..|..+.......+.+..... -..+..+. ...  ..+..|..++-+++...++..+-
T Consensus        25 w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~-~~~--~~~~~~~~llpl~~~~~~~~v~~  100 (316)
T KOG1441|consen   25 WYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVPP-SKI--SSKLPLRTLLPLGLVFCISHVLG  100 (316)
T ss_pred             HhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCC-Ccc--ccccchHHHHHHHHHHHHHHHhc
Confidence            33444455667788887543 234444444333333322222 11111110 000  12345666777788777888888


Q ss_pred             HHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhh
Q 019984          243 SYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRS  296 (333)
Q Consensus       243 ~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~  296 (333)
                      .-.+++.+-....++..+.|++++++++++.+|+.+...+.....+..|+.+.+
T Consensus       101 n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias  154 (316)
T KOG1441|consen  101 NVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS  154 (316)
T ss_pred             chhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence            888999999999999999999999999999999988766655555555544433

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=91.22  E-value=3.9  Score=32.11  Aligned_cols=29  Identities=14%  Similarity=0.251  Sum_probs=27.2

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHh
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIF  135 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~  135 (333)
                      +.+++++||+.++.+++++.++++|++..
T Consensus        78 ~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         78 AAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            77899999999999999999999999875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=90.95  E-value=1.7  Score=33.90  Aligned_cols=32  Identities=16%  Similarity=0.101  Sum_probs=29.3

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      +.+++++||+.+..+++++.++++|++..-..
T Consensus        73 l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          73 LVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            78999999999999999999999999987554

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=90.03  E-value=0.48  Score=37.91  Aligned_cols=33  Identities=6%  Similarity=0.018  Sum_probs=30.0

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhccC
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILFP  139 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~~  139 (333)
                      ++++++++|+.++.+++++.++++|++.....+
T Consensus        73 ~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         73 LFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            678999999999999999999999999887653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=89.67  E-value=0.11  Score=46.39  Aligned_cols=174  Identities=9%  Similarity=0.099  Sum_probs=104.1

Q ss_pred             HHHHHHhCcccCchhH----HHHHHHHHhhHHhhccCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhhhHHHHHHHHhcC
Q 019984          107 IWGTLIMQKRYKGYDY----FLALLVTLGCSIFILFPSGADLSPYSKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGY  182 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~----l~vlli~~Gv~l~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s~~~~a~~~~~~~~l~~~~  182 (333)
                      +++.+.++|-.+..+.    .++++++.|+.+.+..+.+ +.  ..++.++.-.|+...+.|.+-+-.|.+..+.    .
T Consensus       102 L~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~-nk--~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f  174 (288)
T COG4975         102 LFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN-NK--EEENPSNLKKGIVILLISTLGYVGYVVLFQL----F  174 (288)
T ss_pred             eeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc-cc--cccChHhhhhheeeeeeeccceeeeEeeecc----c
Confidence            7778888888777764    4778888999887776421 11  1122345567888777777776666655432    3


Q ss_pred             CCChHHHHHHhhHHHHHHHHHHH-HhcCchhHHHHhhhhChHhHHHHHHHHHHHHHHHHHHHHHHHhhChhHHHHHHHHH
Q 019984          183 DMEIHNQIFYTTLCSCVLSLSGL-ILEGHLFLAIDFVYHHLDCFFDVALLSTVATTSQFFISYTIRTFGALTFATIMTTR  261 (333)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~il~l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~  261 (333)
                      +.+.+....-+. +++++..... ....+.    .   .+...|.. ..-++.=..|+++.+.+-++.|-.|.=..+-+-
T Consensus       175 ~v~g~saiLPqA-iGMv~~ali~~~~~~~~----~---~~K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlg  245 (288)
T COG4975         175 DVDGLSAILPQA-IGMVIGALILGFFKMEK----R---FNKYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLG  245 (288)
T ss_pred             cccchhhhhHHH-HHHHHHHHHHhhccccc----c---hHHHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhe
Confidence            445444443332 2333222221 111111    0   12223332 122444457888888887777766655556666


Q ss_pred             HHHHHHhHhhhccCCCccccc----chhhhhhhhhhhhh
Q 019984          262 QLVSIVLSCVWFRHPLSWEQC----IGSIIVFGALYTRS  296 (333)
Q Consensus       262 ~v~sills~~~fge~~t~~~~----iG~~lvl~Gv~~~~  296 (333)
                      -+.+.+-++++++|+-|..++    +|+.+++.|..+-.
T Consensus       246 ViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         246 VIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             eeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            778999999999999998874    57777776654443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=88.64  E-value=3.3  Score=33.89  Aligned_cols=81  Identities=14%  Similarity=0.094  Sum_probs=49.9

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCchhhHH--HHHHHHHhhhhhhHH----------------HHHHH-
Q 019984           54 YSLFLVFCNRLMTSAVSAGTLIASRKA---IDPVAPVYKYC--LVSMSNILTTTCQYE----------------IWGTL-  111 (333)
Q Consensus        54 ~p~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~--~~s~~~~~a~~~~~~----------------ll~~l-  111 (333)
                      .|+.-+++....+.+...+.....+++   ..++.|++.|.  +.+...+..+....|                +.+.+ 
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i  108 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLI  108 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            578888888888888887766655432   12356888774  233332222211111                12222 


Q ss_pred             -------HhCcccCchhHHHHHHHHHhhHH
Q 019984          112 -------IMQKRYKGYDYFLALLVTLGCSI  134 (333)
Q Consensus       112 -------~~~~k~s~~~~l~vlli~~Gv~l  134 (333)
                             .-|++.+++++++++++++|+.+
T Consensus       109 D~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  109 DHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence                   24689999999999999999863

>PRK11431 multidrug efflux system protein; Provisional

Probab=86.39  E-value=0.96  Score=35.28  Aligned_cols=32  Identities=16%  Similarity=0.121  Sum_probs=29.0

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      +.+++++||+.++.+++++.++++|++.....
T Consensus        72 lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         72 ITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            78999999999999999999999999987543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=86.18  E-value=1.1  Score=40.96  Aligned_cols=67  Identities=10%  Similarity=0.121  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          232 STVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       232 ~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ++|-..|....+-.+..++|+...+.--..-+++-++|..+++++++..||+|+..+..|+......
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            4555555566666777888888877777777899999999999999999999999999997665443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=86.18  E-value=0.38  Score=43.34  Aligned_cols=137  Identities=14%  Similarity=0.131  Sum_probs=85.4

Q ss_pred             cchHHHHHH-HHHHHHhhhhhHHHHHHHHhcCCCChHHHHHHhhHHHHHHHHHHHHhcCchhHHHHhhhhChHhHHHHHH
Q 019984          152 ENTVWGVSL-MVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHLDCFFDVAL  230 (333)
Q Consensus       152 ~~~~~G~~l-~l~s~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~il~  230 (333)
                      ...++|+.+ .++|+++.+....-++-..+.-+. |..+.|.....=++.-.|.+.+......         .-|..-++
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~-Pt~QtFl~Y~LLalVY~~~~~fR~~~~~---------~~~~hYil   83 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINA-PTSQTFLNYVLLALVYGPIMLFRRKYIK---------AKWRHYIL   83 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCC-ccHHHHHHHHHHHHHHhhHHHhhhHHHH---------HHHHHhhh
Confidence            456777766 466666655544444433332222 2223332222212222233222221111         13444445


Q ss_pred             HHHHHHHHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          231 LSTVATTSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       231 l~~~~~l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      +++.-+=+++++..+.++++-+...+...--.....+++|++++.+-.+.++.|.+++++|+......
T Consensus        84 la~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s  151 (336)
T KOG2766|consen   84 LAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS  151 (336)
T ss_pred             eeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence            56666667777777888888888888888888899999999999999999999999999997665543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=85.25  E-value=0.56  Score=40.62  Aligned_cols=62  Identities=8%  Similarity=0.218  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          237 TSQFFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       237 l~~~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      ..++.+..++++.+|+.++-+....+.+.-+++++++|+++.-..++...+.++|++.-.+.
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            34567777899999999999999999999999999999999999999999999998776554

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.89  E-value=10  Score=31.57  Aligned_cols=84  Identities=12%  Similarity=0.053  Sum_probs=49.3

Q ss_pred             eehHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCCchhhHHH--HHHHHHhhhhhhHH--------------------
Q 019984           53 KYSLFLVFCNRLMTSAVSAGTLIASRKAI----DPVAPVYKYCL--VSMSNILTTTCQYE--------------------  106 (333)
Q Consensus        53 ~~p~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~y~~--~s~~~~~a~~~~~~--------------------  106 (333)
                      ..|..-.+....+++++..++.....++.    .++.||+.|..  .+...+.++...+|                    
T Consensus        32 ~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl  111 (150)
T COG3238          32 GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGL  111 (150)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence            37888888888888877666554432221    35678888742  22211111111111                    


Q ss_pred             ---HHHHH-HhCcccCchhHHHHHHHHHhhHHhh
Q 019984          107 ---IWGTL-IMQKRYKGYDYFLALLVTLGCSIFI  136 (333)
Q Consensus       107 ---ll~~l-~~~~k~s~~~~l~vlli~~Gv~l~~  136 (333)
                         .++++ .-++++++.++++++++.+|+.++.
T Consensus       112 liD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238         112 LIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence               22222 2268899999999999999955543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.26  E-value=2  Score=38.27  Aligned_cols=63  Identities=5%  Similarity=0.079  Sum_probs=52.2

Q ss_pred             HHHHHHHHhhChhHHHHHHHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhcccc
Q 019984          240 FFISYTIRTFGALTFATIMTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFKKVS  302 (333)
Q Consensus       240 ~~~~~~i~~~~alt~sv~~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k~~~  302 (333)
                      .....+++..+=-|..+--..||+-.+++++++.++.-+|....-..++..|+.+..+..+|.
T Consensus       100 VssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen  100 VSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            455567777777777788889999999999999999999999999999999998877644333

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=82.96  E-value=1.8  Score=34.99  Aligned_cols=28  Identities=11%  Similarity=0.032  Sum_probs=25.5

Q ss_pred             HHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          111 LIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       111 l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      ++++|+.++.++++++++++|+.+...+
T Consensus        96 ~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         96 PWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4899999999999999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	333
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 50/359 (13%), Positives = 101/359 (28%), Gaps = 95/359 (26%)

Query: 11  VKDSRVLKMIFAVSGIMTTLVIYGILQEKIMRVPYGADNEYFKYSLFLVFCNRLMTSAVS 70
           V +     +      I++   I  I+  K        D       LF    ++       
Sbjct: 30  VDNFDCKDVQDMPKSILSKEEIDHIIMSK--------DAVSGTLRLFWTLLSK------- 74

Query: 71  AGTLIASRKAIDPVAPVYKYCLVSMSNILTTTCQYEIWGTLIMQKRYKGYDYFLALLVTL 130
               +  +   + +   YK+        L +  + E     +M + Y             
Sbjct: 75  -QEEMVQKFVEEVLRINYKF--------LMSPIKTEQRQPSMMTRMYIEQ---------- 115

Query: 131 GCSIFILFPSGADLSPYSKGRENTVW-------------GVSLMVGYLGFDGFT----ST 173
                 L+      + Y+  R                   V +  G LG  G T      
Sbjct: 116 ---RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI-DGVLGS-GKTWVALDV 170

Query: 174 FQDKLFKGYDMEIHNQIFYTTLCSCVLSLSGLILEGHLFLAIDFVYHHL-DCFFDVAL-- 230
                 +    ++  +IF+  L +C    + L +   L   ID  +    D   ++ L  
Sbjct: 171 CLSYKVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 231 ------LSTVATTSQFFISYTI-------RTFGALTFA--TIMTTRQL-VSIVLSCVWFR 274
                 L  +  +  +     +       + + A   +   ++TTR   V+  LS     
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287

Query: 275 HPLSWEQCIGSIIVFGALYTRSFF-KKVSEKPR--PSE----HPM------ENMHNGAS 320
           H       +           +S   K +  +P+  P E    +P       E++ +G +
Sbjct: 288 HISLDHHSMT----LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	333
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.7
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.06
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	92.95
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	89.85

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.70  E-value=1.1e-08  Score=82.74  Aligned_cols=68  Identities=13%  Similarity=0.162  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHHHHHHhhChhHHHHH-HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhhc
Q 019984          232 STVATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFFK  299 (333)
Q Consensus       232 ~~~~~l~~~~~~~~i~~~~alt~sv~-~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~k  299 (333)
                      .++..++++++.+++++.++.++..+ ..+.|+++.++|+++|||++++.+++|+++++.|+++....+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34455667788889999999988888 899999999999999999999999999999999998876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.06  E-value=1.3e-05  Score=62.23  Aligned_cols=65  Identities=14%  Similarity=0.181  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHhhChhHHHHH-HHHHHHHHHHhHhhhccCCCcccccchhhhhhhhhhhhhhh
Q 019984          234 VATTSQFFISYTIRTFGALTFATI-MTTRQLVSIVLSCVWFRHPLSWEQCIGSIIVFGALYTRSFF  298 (333)
Q Consensus       234 ~~~l~~~~~~~~i~~~~alt~sv~-~~l~~v~sills~~~fge~~t~~~~iG~~lvl~Gv~~~~~~  298 (333)
                      +..++.++..+++++.+..++..+ ..+.++++.++|+++|||++|+.+++|+++++.|+......
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344556777779999999998777 89999999999999999999999999999999998876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=92.95  E-value=0.12  Score=39.40  Aligned_cols=32  Identities=16%  Similarity=0.119  Sum_probs=29.7

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      +++++++||+.++.+++++.++++|+.+....
T Consensus        73 l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           73 LLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            77899999999999999999999999988765

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=89.85  E-value=0.21  Score=39.80  Aligned_cols=32  Identities=16%  Similarity=0.119  Sum_probs=23.8

Q ss_pred             HHHHHHhCcccCchhHHHHHHHHHhhHHhhcc
Q 019984          107 IWGTLIMQKRYKGYDYFLALLVTLGCSIFILF  138 (333)
Q Consensus       107 ll~~l~~~~k~s~~~~l~vlli~~Gv~l~~~~  138 (333)
                      ++++++++|++++.++++++++++|+++....
T Consensus        73 l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           73 LLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            67899999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00