Citrus Sinensis ID: 019991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
Protein Sequence
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCDAP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHccccccEEEEEccccEEEcccccccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHcccccccccccEEcHHHHHHHHHHccccccccccccEEEEEEccccccHHHcccccEEccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHccccEEEEcccccccccccEEEccHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHccccEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHHccccccEEEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHcHHHHHHHccccEEEEEcccEEcccccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHcccccHHcccccEEEEEccccccHHHcccccEEcccHHHccEEEEEccccccccccccccccHHHHHHHHHHHHHccccEEEEcccEEEEccccEEccHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHHccccccEEEEEcccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
miakcsvqsndphlfQTLNGLRHIAETRRFKAWLLDqfgvlhdgkkpypgaiSTLEMLATTGAKMVVIsnssrrasttidklkslgfdpslfagaitsgelTHQYLLRRDDAWFAALGRScihmtwsdrgaisleglglkvvenVEEADFILAhgtegmglpsgdvrpmsLQDLEKILEICaskkipmvvanpdyVTVEARALRVMPGTLASKFEKLggevrwmgkpdKLWATLFTMILRVQMQlesspysllegsmqlnlDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTfmccetkgcdap
Flexible Loop (DISEMBL)
miakcsvqsndphlfQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVvisnssrraSTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHgtegmglpsGDVRPMSLQDLEKILEIcaskkipmvvaNPDYVTVEARALRVMPGTLASkfeklggevrwmGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCDAP
Low Complexity Region (SEG)
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEklqiyllfkllylNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCDAP
Disordered region (IsUnstruct)
************HLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN******TTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETK*****
Disordered Region (DISOPRED)
**********************HIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKG****
Disordered Region (DISEMBL)
********SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCDAP
Disordered Region (DISPRO)
***********PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCD**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHFRGRLILDLKNAIFFLTEFFCHQMIVSTFMCCETKGCDAP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	332	2.2.26 [Sep-21-2011]
Q3ZBF9	296	Pyridoxal phosphate phosp	yes	no	0.262	0.293	0.358	0.0002
Q96GD0	296	Pyridoxal phosphate phosp	yes	no	0.253	0.283	0.359	0.0006

>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 18  RAQGVLFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGF 77

Query: 88  ----DPSLFAGAITSGELTHQYLLRRDDAWFA 115
                  LF+ A+ +  L  Q LL   D   A
Sbjct: 78  GGLRSEQLFSSALCAARLLRQRLLGPPDTQGA 109

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7EC: 4

>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 18  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 77

Query: 88  D----PSLFAGAITSGELTHQYLLRRDDA 112
                  LF+ A+ +  L  Q L    DA
Sbjct: 78  GGLRAEQLFSSALCAARLLRQRLPGPPDA 106

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
255567758	313	catalytic, putative [Ricinus communis] g	0.692	0.734	0.795	1e-108
224127222	308	predicted protein [Populus trichocarpa]	0.674	0.727	0.772	1e-99
413968592	223	HAD superfamily protein [Solanum tuberos	0.656	0.977	0.778	2e-96
297807077	306	hypothetical protein ARALYDRAFT_909002 [	0.665	0.722	0.747	2e-96
449452883	313	PREDICTED: uncharacterized hydrolase Yut	0.692	0.734	0.786	3e-96
225434150	314	PREDICTED: uncharacterized hydrolase yut	0.692	0.732	0.761	5e-95
357475623	312	hypothetical protein MTR_4g087590 [Medic	0.689	0.733	0.765	2e-94
19310550	316	unknown protein [Arabidopsis thaliana]	0.665	0.699	0.734	5e-94
42567769	306	haloacid dehalogenase-like hydrolase dom	0.665	0.722	0.734	6e-94
356500114	315	PREDICTED: uncharacterized hydrolase yut	0.692	0.730	0.754	9e-93

>gi|255567758|ref|XP_002524857.1| catalytic, putative [Ricinus communis] gi|223535820|gb|EEF37481.1| catalytic, putative [Ricinus communis]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/230 (79%), Positives = 212/230 (92%)

Query: 1   MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
           M+ + S++ N+ HLFQT NGL+H+AETRRFKAWLLDQFGVLHDGK+PYPGAISTL+ +A+
Sbjct: 1   MMPQSSIKYNEAHLFQTFNGLQHLAETRRFKAWLLDQFGVLHDGKQPYPGAISTLKKIAS 60

Query: 61  TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
           +GAKMV+ISNSSRRASTT+DK+KSLGFDPSLF GAITSGELTHQ+L RRDD WFAALG+S
Sbjct: 61  SGAKMVIISNSSRRASTTMDKMKSLGFDPSLFVGAITSGELTHQFLQRRDDDWFAALGKS 120

Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
           CIHMTWSDRGAISLEGLGL+VVENVEEA F+LAHGTE +G PSG   PM+L++LEKILE 
Sbjct: 121 CIHMTWSDRGAISLEGLGLQVVENVEEAAFVLAHGTEALGQPSGAACPMTLEELEKILEH 180

Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
           CA+K IPMVVANPD+VTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPDK+
Sbjct: 181 CAAKGIPMVVANPDFVTVEARNLRVMPGTLAAKYEKLGGEVKWMGKPDKI 230

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127222|ref|XP_002329430.1| predicted protein [Populus trichocarpa] gi|222870480|gb|EEF07611.1| predicted protein [Populus trichocarpa]

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 173/224 (77%), Positives = 202/224 (90%)

Query: 7   VQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMV 66
           +QS++  LFQT NGL+HIA+T +FKAW LDQFGVLHDGK+PYPGAISTL+ LATTGAKMV
Sbjct: 2   LQSSELQLFQTFNGLQHIAKTHQFKAWFLDQFGVLHDGKQPYPGAISTLQKLATTGAKMV 61

Query: 67  VISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTW 126
           +ISNSSRRASTT++K+KSLGFD SLF GAITSGELTHQYL RRD  WFAALG+SCIHMTW
Sbjct: 62  IISNSSRRASTTMEKMKSLGFDTSLFLGAITSGELTHQYLQRRDADWFAALGKSCIHMTW 121

Query: 127 SDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI 186
             RGAISLEGLGL+VV+ VEEA+F+LAHGTE +GL SG   PM+L++LEK+LE CA+K+I
Sbjct: 122 KGRGAISLEGLGLQVVDKVEEAEFVLAHGTEALGLSSGASCPMTLEELEKVLERCAAKQI 181

Query: 187 PMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
           PMVVANPD+VTVEAR LRVMPGTLA+K+EKLGGEV+ MGKPDK+
Sbjct: 182 PMVVANPDFVTVEARDLRVMPGTLAAKYEKLGGEVKSMGKPDKI 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413968592|gb|AFW90633.1| HAD superfamily protein [Solanum tuberosum]

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 172/221 (77%), Positives = 198/221 (89%), Gaps = 3/221 (1%)

Query: 1   MIAKC-SVQSNDPH--LFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEM 57
           M+ +C SVQS++P    FQTLNG++H+AE+RRFKAW LDQFGVLHDGK+PYPGAIS LE 
Sbjct: 1   MMGRCLSVQSSNPTELKFQTLNGIQHLAESRRFKAWFLDQFGVLHDGKQPYPGAISALEK 60

Query: 58  LATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAAL 117
           LAT GAKMV+ISNSSRRASTT++KL+SLGFDPSLF GAI SGELTHQYL  R+DAWFA++
Sbjct: 61  LATFGAKMVIISNSSRRASTTLEKLRSLGFDPSLFIGAIMSGELTHQYLQTREDAWFASI 120

Query: 118 GRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKI 177
           GRSCIHMTWSDRGAISL+GLGL+VVENVEEADFILAHGTE +GL SG   PM+L +LEKI
Sbjct: 121 GRSCIHMTWSDRGAISLKGLGLEVVENVEEADFILAHGTEALGLSSGAAIPMNLDELEKI 180

Query: 178 LEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLG 218
           L+ CA+KKIPMVVANPD+VTVEARALRVMPGTLA+ +EKL 
Sbjct: 181 LDRCATKKIPMVVANPDFVTVEARALRVMPGTLAATYEKLA 221

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807077|ref|XP_002871422.1| hypothetical protein ARALYDRAFT_909002 [Arabidopsis lyrata subsp. lyrata] gi|297317259|gb|EFH47681.1| hypothetical protein ARALYDRAFT_909002 [Arabidopsis lyrata subsp. lyrata]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 169/226 (74%), Positives = 192/226 (84%), Gaps = 5/226 (2%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q + P     +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 3   CSSQISQP-----MNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 57

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGRSCIHM
Sbjct: 58  IVIISNSSRRASTTMEKLKGLGFDPSYFTGAITSGELTHQSLQRRDDPWFAALGRSCIHM 117

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P +L +LEKILE  A++
Sbjct: 118 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTLDELEKILEKSAAR 177

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+WMGKP K+
Sbjct: 178 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKWMGKPHKM 223

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452883|ref|XP_004144188.1| PREDICTED: uncharacterized hydrolase YutF-like [Cucumis sativus] gi|449511400|ref|XP_004163945.1| PREDICTED: uncharacterized hydrolase YutF-like [Cucumis sativus]

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 181/230 (78%), Positives = 204/230 (88%)

Query: 1   MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
           M    SV S + HLFQ+ NGL+ +A+T RFKAW LDQFGVLHDGK+PYPGA+  LE LA 
Sbjct: 1   MAPGWSVMSPESHLFQSCNGLQQLAQTCRFKAWFLDQFGVLHDGKQPYPGAVLALEKLAE 60

Query: 61  TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
            G KMV+ISNSSRR+STT++KLKSLGFDPSLF GAITSGELTH+YL RRDDAWFAALGRS
Sbjct: 61  CGTKMVIISNSSRRSSTTMEKLKSLGFDPSLFVGAITSGELTHRYLQRRDDAWFAALGRS 120

Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
           CIHMTWS RGAISLEGLGL+VV+NVEEA+FILAHGTE +G PSGD  PM+L++LEKILE 
Sbjct: 121 CIHMTWSSRGAISLEGLGLRVVDNVEEAEFILAHGTEALGHPSGDSLPMTLEELEKILEQ 180

Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
           CA+KKIPMVVANPDYVTVEAR LRVMPGTLASK+EKLGGEV+WMGKPDK+
Sbjct: 181 CAAKKIPMVVANPDYVTVEARDLRVMPGTLASKYEKLGGEVKWMGKPDKI 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434150|ref|XP_002278008.1| PREDICTED: uncharacterized hydrolase yutF [Vitis vinifera] gi|296084318|emb|CBI24706.3| unnamed protein product [Vitis vinifera]

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 176/231 (76%), Positives = 204/231 (88%), Gaps = 1/231 (0%)

Query: 1   MIAKCSVQ-SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLA 59
           M+ +CS+  S+D  LF T NG++ +++T  FKAW LDQFGVLHDGK+PYPGAISTLE LA
Sbjct: 1   MMPRCSISPSSDVQLFHTFNGIQQLSQTHHFKAWFLDQFGVLHDGKQPYPGAISTLEKLA 60

Query: 60  TTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGR 119
           T+GAKMV+ISNSSRR+S TI+K+KSLGFDPSLF GAITSGELTHQ+LLRRDDA FA LGR
Sbjct: 61  TSGAKMVIISNSSRRSSITIEKMKSLGFDPSLFVGAITSGELTHQHLLRRDDAGFAKLGR 120

Query: 120 SCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILE 179
           SCIHMTWSDRGAISLEGLGL+VV+ VEEA+F+LAHGTE +GLPSG V PM L+DLEKIL 
Sbjct: 121 SCIHMTWSDRGAISLEGLGLQVVDKVEEAEFVLAHGTEALGLPSGAVLPMKLEDLEKILG 180

Query: 180 ICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
            CA+K IPMVVANPD+VTVEARA  VMPG LA+K+EKLGGEV+WMGKPDK+
Sbjct: 181 RCAAKNIPMVVANPDFVTVEARAFCVMPGALAAKYEKLGGEVKWMGKPDKI 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475623|ref|XP_003608097.1| hypothetical protein MTR_4g087590 [Medicago truncatula] gi|355509152|gb|AES90294.1| hypothetical protein MTR_4g087590 [Medicago truncatula]

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/230 (76%), Positives = 201/230 (87%), Gaps = 1/230 (0%)

Query: 1   MIAKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLAT 60
           MI KCS  S  P  FQT  GLR +AETRRFK WLLDQFGVLHDGK+PYPGAISTLE +A 
Sbjct: 1   MIPKCS-SSLHPLQFQTFTGLRQLAETRRFKVWLLDQFGVLHDGKQPYPGAISTLENIAK 59

Query: 61  TGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRS 120
           TG KMV+ISNSSRR+S T++K+KSLGFD SLF GAITSGELTHQYL RRDD WFA+LGRS
Sbjct: 60  TGGKMVIISNSSRRSSVTLEKVKSLGFDASLFLGAITSGELTHQYLQRRDDPWFASLGRS 119

Query: 121 CIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180
           CIH TWS RGAISLEGL L+VVENVEEA+F+LAHGTE +G  +G+ R M L+DLE+ILE+
Sbjct: 120 CIHFTWSGRGAISLEGLDLRVVENVEEAEFVLAHGTEALGGANGNARSMKLEDLEQILEL 179

Query: 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
           CA+K+IPMVVANPDYVTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPD++
Sbjct: 180 CAAKRIPMVVANPDYVTVEARDLRVMPGTLAAKYEKLGGEVKWMGKPDEI 229

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|19310550|gb|AAL85008.1| unknown protein [Arabidopsis thaliana]

 Score =  350 bits (898), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 166/226 (73%), Positives = 190/226 (84%), Gaps = 5/226 (2%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q     L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 13  CSSQ-----LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 67

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+
Sbjct: 68  IVIISNSSRRASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHI 127

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++
Sbjct: 128 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAAR 187

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+
Sbjct: 188 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKM 233

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567769|ref|NP_196608.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|50198963|gb|AAT70484.1| At5g10460 [Arabidopsis thaliana] gi|332004162|gb|AED91545.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  350 bits (897), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 166/226 (73%), Positives = 190/226 (84%), Gaps = 5/226 (2%)

Query: 5   CSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK 64
           CS Q     L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK
Sbjct: 3   CSSQ-----LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAK 57

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM 124
           +V+ISNSSRRASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+
Sbjct: 58  IVIISNSSRRASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHI 117

Query: 125 TWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASK 184
           TW+DRGAISLEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++
Sbjct: 118 TWNDRGAISLEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAAR 177

Query: 185 KIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
            +PM+VANPDYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+
Sbjct: 178 GLPMIVANPDYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKM 223

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500114|ref|XP_003518879.1| PREDICTED: uncharacterized hydrolase yutF-like [Glycine max]

 Score =  346 bits (887), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 175/232 (75%), Positives = 196/232 (84%), Gaps = 2/232 (0%)

Query: 1   MIAKCSVQSND--PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEML 58
           M  KCSV      P  FQ LNGLR +AETRRFK WLLDQFGVLHDGK+PYPGAISTLE +
Sbjct: 1   MNPKCSVPPPQIRPFQFQNLNGLRQLAETRRFKGWLLDQFGVLHDGKEPYPGAISTLENI 60

Query: 59  ATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALG 118
           A TGAKMV+ISNSSRR+S TI+K+K LGFD SLF GAITSGELTHQYL RRDD WFA LG
Sbjct: 61  AKTGAKMVIISNSSRRSSVTIEKVKGLGFDASLFLGAITSGELTHQYLQRRDDPWFATLG 120

Query: 119 RSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKIL 178
           RSCIH TW+ RGAISLEGL L+VV NVEEA+F+LAHGTE +G   G  R M L+D+EKIL
Sbjct: 121 RSCIHFTWNGRGAISLEGLDLRVVANVEEAEFVLAHGTEALGNADGTARSMKLEDMEKIL 180

Query: 179 EICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
           E+CA+K IPMVVANPDYVTVEAR LRVMPGTLA+K+EKLGGEV+WMGKPD++
Sbjct: 181 ELCAAKGIPMVVANPDYVTVEARDLRVMPGTLAAKYEKLGGEVKWMGKPDEI 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
TAIR|locus:2142454	306	AT5G10460 "AT5G10460" [Arabido	0.653	0.709	0.751	2e-86
TIGR_CMR|SPO_3151	310	SPO_3151 "HAD-superfamily subf	0.644	0.690	0.252	6.5e-11

TAIR|locus:2142454 AT5G10460 "AT5G10460" [Arabidopsis thaliana (taxid:3702)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 163/217 (75%), Positives = 187/217 (86%)

Query:    14 LFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
             L Q +NGL+ I ETR FKAWLLDQ+GVLHDGKKPYPGAISTL+ LAT GAK+V+ISNSSR
Sbjct:     7 LSQPMNGLKDIVETRNFKAWLLDQYGVLHDGKKPYPGAISTLKNLATAGAKIVIISNSSR 66

Query:    74 RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS 133
             RASTT++KLK LGFDPS F GAITSGELTHQ L RRDD WFAALGR CIH+TW+DRGAIS
Sbjct:    67 RASTTMEKLKGLGFDPSFFTGAITSGELTHQSLQRRDDPWFAALGRRCIHITWNDRGAIS 126

Query:   134 LEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANP 193
             LEGL L VVENVEEADF+LAHGTE +GLPSG V P ++ +LEKILE  A++ +PM+VANP
Sbjct:   127 LEGLDLNVVENVEEADFVLAHGTEALGLPSGSVSPRTIDELEKILEKSAARGLPMIVANP 186

Query:   194 DYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKL 230
             DYVTVEA    +MPGTLASK+E+LGGEV+ MGKP K+
Sbjct:   187 DYVTVEANVFHIMPGTLASKYEELGGEVKSMGKPHKM 223

GO:0016787 "hydrolase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR|SPO_3151 SPO_3151 "HAD-superfamily subfamily IIA hydrolase, TIGR01459" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 173 (66.0 bits), Expect = 6.5e-11, P = 6.5e-11
 Identities = 57/226 (25%), Positives = 101/226 (44%)

Query:     3 AKCSVQSNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG 62
             A  +V   DP + Q +  L  I+E  R++A  +D +G +H+G   YP A++ L+     G
Sbjct:     9 ALATVSKPDPDMTQIITALAEISE--RYRALFVDLWGCVHNGVTAYPEAVAALQAYRAAG 66

Query:    63 AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCI 122
               +V+++NS +  +    +L         +    TSG+     + R       A+G+   
Sbjct:    67 GIVVLVTNSPKPRAGVATQLSQFKVPQDAYDTIATSGDSARSAMFR------GAVGQKVY 120

Query:   123 HMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA 182
              M   +R A   E L  K++++  E   +     EG+ +  G   PM+   + +   + A
Sbjct:   121 FMGEWERDAGFFEPL--KLLDSPVEITRVPLQEAEGI-VCCGPFDPMADPAVNRPDFLYA 177

Query:   183 SKK-IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKP 227
               K + ++ ANPD V           G LA  + ++GGE  + GKP
Sbjct:   178 KTKGMKLLCANPDIVVDRGEIREWCAGALARLYTEMGGESLYFGKP 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      332       319   0.00084  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  227 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.71u 0.11s 25.82t   Elapsed:  00:00:01
  Total cpu time:  25.71u 0.11s 25.82t   Elapsed:  00:00:01
  Start:  Fri May 10 19:13:00 2013   End:  Fri May 10 19:13:01 2013

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_scaffold_120000092	hypothetical protein (308 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.IX.1599.1	hypothetical protein (424 aa)	•								0.652
	eugene3.01370007	SubName- Full=Putative uncharacterized protein; (305 aa)			•						0.465
	gw1.X.1500.1	SubName- Full=Putative uncharacterized protein; (303 aa)			•						0.461
	estExt_fgenesh4_pg.C_LG_VIII0664	phosphoglycolate phosphatase (EC-3.1.3.18) (321 aa)			•						0.435

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	332
TIGR01459	242	TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class	6e-35
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	6e-21
pfam13344	101	pfam13344, Hydrolase_6, Haloacid dehalogenase-like	4e-17
TIGR01460	236	TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super	3e-13
TIGR01452	279	TIGR01452, PGP_euk, phosphoglycolate/pyridoxal pho	2e-05
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	2e-05
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	1e-04
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	0.001
PLN02645	311	PLN02645, PLN02645, phosphoglycolate phosphatase	0.002

>gnl|CDD|130526 TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class IIA hydrolase, TIGR01459

 Score =  127 bits (320), Expect = 6e-35
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 11/201 (5%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
            +  +LLD +GV+ DG   YPGA+  L  +   G  +  +SNS R   +    LKSLG +
Sbjct: 7   DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCI-HMTWSDRGAISLEGLGLKVVENVEE 147
             L    I+SGE+  Q +L  +      +    I  +   +   I+L        EN   
Sbjct: 67  ADLPEMIISSGEIAVQMIL--ESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDENKAN 124

Query: 148 ADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMP 207
           A  I  + +E   L         L + +++     ++KIP + ANPD    +    R   
Sbjct: 125 ASLITIYRSENEKLD--------LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGA 176

Query: 208 GTLASKFEKLGGEVRWMGKPD 228
           G  A   ++LGG+V + GKP 
Sbjct: 177 GYYAELIKQLGGKVIYSGKPY 197

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily model). Length = 242

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 90.0 bits (224), Expect = 6e-21
 Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 20/205 (9%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGF 87
           ++  +L D  GVL+ G +  PGA   L+ L   G  ++ ++N+S R       +L SLG 
Sbjct: 7   KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGG 66

Query: 88  DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHM-TWSDRGAISLEGLGLKVVENVE 146
                   +TSG+ T  YL +         G+    +     +  +   G  L   E   
Sbjct: 67  VDVTPDDIVTSGDATADYLAK------QKPGKKVYVIGEEGLKEELEGAGFELVDEEEPA 120

Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
             D ++           G  R ++ + L + L   A    P +  NPD      R LR  
Sbjct: 121 RVDAVVV----------GLDRTLTYEKLAEALLAIA-AGAPFIATNPDLTVPTERGLRPG 169

Query: 207 PGTLASKFEKLGGEVR-WMGKPDKL 230
            G +A+  E+  G     +GKP   
Sbjct: 170 AGAIAALLEQATGREPTVIGKPSPA 194

Length = 269

>gnl|CDD|205524 pfam13344, Hydrolase_6, Haloacid dehalogenase-like hydrolase

 Score = 75.2 bits (186), Expect = 4e-17
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 33  WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFD--P 89
           +L D  GVL  G +P PGA   L  L   G  +V ++N+S R+      KL+ LGFD   
Sbjct: 1   FLFDVDGVLWRGGEPIPGAAEALNALRAAGKPVVFVTNNSSRSREQYAKKLRKLGFDVDE 60

Query: 90  SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140
                 ITS      YL  R            + +  S+     LE  G +
Sbjct: 61  DEV---ITSATAAADYLKER-------KFGKKVLVIGSEGLREELEEAGFE 101

This family is part of the HAD superfamily. Length = 101

>gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 54/212 (25%), Positives = 83/212 (39%), Gaps = 17/212 (8%)

Query: 34  LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDPSLF 92
           L D  GVL  G KP PGA   L  L   G  +V ++N+S R+     +KL SL       
Sbjct: 2   LFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSP 61

Query: 93  AGAITSGELTHQYLLRR-DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFI 151
              ITSG +T   L +R +      +G              SLEGLG +  +  ++ D +
Sbjct: 62  DQIITSGSVTKDLLRQRFEGEKVYVIG--------VGELRESLEGLGFR-NDFFDDIDHL 112

Query: 152 LAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEAR-ALRVMPGTL 210
                    +        S  +L K   + A   +P + AN D +        R   G +
Sbjct: 113 AIEKIPAAVIVGEPSDF-SYDELAKAAYLLAEGDVPFIAANRDDLVRLGDGRFRPGAGAI 171

Query: 211 ASKFEKLGGEVR-WMGKPDKLWATLFTMILRV 241
           A+  ++L G     +GKP      ++   L +
Sbjct: 172 AAGIKELSGREPTVVGKPSPA---IYRAALNL 200

This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236

>gnl|CDD|233420 TIGR01452, PGP_euk, phosphoglycolate/pyridoxal phosphate phosphatase family

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGF 87
           R + ++ D  GVL  G++  PGA   L+ LA  G   + ++N+S ++ +    K   LGF
Sbjct: 1   RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGF 60

Query: 88  DPS---LFAGAITSGELTHQ 104
           +     LF+ A+ +  L  Q
Sbjct: 61  NGLAEQLFSSALCAARLLRQ 80

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In mammals, PGP is found in many tissues, notably in red blood cells where P-glycolate is and important activator of the hydrolysis of 2,3-bisphosphoglycerate, a major modifier of the oxygen affinity of hemoglobin. Pyridoxal phosphate (PLP, Vitamin B6) phosphatase is involved in the degradation of PLP in mammals and is widely distributed in human tissues including erythrocyes. The enzymes described here are members of the Haloacid dehalogenase superfamily of hydrolase enzymes (pfam00702). Unlike the bacterial PGP equivalog (TIGR01449), which is a member of class (subfamily) I, these enzymes are members of class (subfamily) II. These two families have almost certainly arisen from convergent evolution (although these two ancestors may themselves have diverged from a more distant HAD superfamily progenitor). The primary seed sequence for this model comes from Chlamydomonas reinhardtii, a photosynthetic alga. The enzyme has been purified and characterized and these data are fully consistent with the assignment of function as a PGPase involved in photorespiration. The second seed, from Homo sapiens chromosome 22 has been characterized as a pyridoxal phosphatase. Biochemical characterization of partially purified PGP's from various tissues including red blood cells have been performed while one gene for PGP has been localized to chromosome 16p13.3. The sequence used here maps to chromosome 22. There is indeed a related gene on chromosome 16 (and it is expressed, since EST's are found) which shows 46% identity and 59% positives by BLAST2 (E=1e-66). The chromosome 16 gene is not in evidence in nraa but translated from the genomic sequence would score 372.4 (E=7.9e-113) versus This model, well above trusted. The third seed, from C. elegans, is only supported by sequence similarity. This model is limited to eukaryotic species including S. pombe and S. cerevisiae, although several archaea score between the trusted and noise cutoffs. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase d. Length = 279

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 12/84 (14%)

Query: 32  AWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82
           A L D  G L D +         + YPG    L+ L   G K+ + +N SRR    ++ L
Sbjct: 1   AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRRE--VLELL 58

Query: 83  KSLGFDPSLFAGAITSGELTHQYL 106
           + LG D   F   ITS      Y 
Sbjct: 59  EELGLD-DYFDPVITSNGAAIYYP 81

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 9   SNDPHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGK----KPYPGAISTLEMLATTGAK 64
           SN P  F  L  +R + E    K  +       H  K    + YPG   TL  L  +G +
Sbjct: 56  SNYPTHFDYL--IRRLWEEYNPK-LVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYR 112

Query: 65  MVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
           + +I++         +KL+ LG     F   ITS E 
Sbjct: 113 LGIITDGLPVKQ--WEKLERLGVRD-FFDAVITSEEE 146

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90
           +  L +   +  +G KP PG +  LE L   G  + V S+S RRA+  +  L  LG    
Sbjct: 71  ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERV--LARLGLLD- 127

Query: 91  LFAGAITSGELTH 103
            F   +T+ ++  
Sbjct: 128 YFDVIVTADDVAR 140

Length = 221

>gnl|CDD|178251 PLN02645, PLN02645, phosphoglycolate phosphatase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 32  AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGFD-- 88
            ++ D  GV+  G K   G   TL+ML + G K+V ++N+S ++ +    K +SLG +  
Sbjct: 30  TFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT 89

Query: 89  -----PSLFAGA 95
                 S FA A
Sbjct: 90  EEEIFSSSFAAA 101

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	332
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	100.0
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	100.0
PRK10444	248	UMP phosphatase; Provisional	100.0
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	100.0
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	100.0
PLN02645	311	phosphoglycolate phosphatase	100.0
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	100.0
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	100.0
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	100.0
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	100.0
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.97
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	99.83
KOG1618	389	consensus Predicted phosphatase [General function	99.82
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.62
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.61
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.6
PLN02575	381	haloacid dehalogenase-like hydrolase	99.59
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.57
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.57
PRK11587	218	putative phosphatase; Provisional	99.56
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.56
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.54
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.54
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.53
PRK09449	224	dUMP phosphatase; Provisional	99.53
PRK13288	214	pyrophosphatase PpaX; Provisional	99.52
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.51
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.51
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.5
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.5
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.5
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.49
PLN02940	382	riboflavin kinase	99.48
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.48
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.48
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.46
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.46
COG0546	220	Gph Predicted phosphatases [General function predi	99.46
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.45
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.45
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.45
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.43
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.43
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.41
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.4
PRK06769	173	hypothetical protein; Validated	99.4
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.39
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.39
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.35
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.35
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.34
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.3
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.3
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.29
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.28
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.21
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.21
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.21
PHA02597	197	30.2 hypothetical protein; Provisional	99.2
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.12
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.12
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.08
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.07
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.05
PLN02811	220	hydrolase	99.01
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.0
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.98
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.96
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.88
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	98.87
COG0241	181	HisB Histidinol phosphatase and related phosphatas	98.78
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.77
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	98.77
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.63
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.6
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.6
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.54
PLN02954	224	phosphoserine phosphatase	98.53
PHA02530	300	pseT polynucleotide kinase; Provisional	98.51
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.51
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.45
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	98.38
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.36
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.36
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.35
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.33
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.25
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.15
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.15
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.13
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.11
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.1
PHA02530	300	pseT polynucleotide kinase; Provisional	98.09
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.02
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.0
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	97.99
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.97
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.96
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.95
PTZ00445	219	p36-lilke protein; Provisional	97.95
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.93
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.93
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	97.88
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.86
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.85
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.78
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	97.77
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.77
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.77
PRK10513	270	sugar phosphate phosphatase; Provisional	97.74
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.73
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	97.71
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.7
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.7
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.66
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.66
PRK10976	266	putative hydrolase; Provisional	97.66
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.62
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.62
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.59
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.56
PTZ00174	247	phosphomannomutase; Provisional	97.53
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.5
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.48
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.46
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	97.43
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	97.41
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	97.39
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.37
PLN02887	580	hydrolase family protein	97.31
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.27
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	97.26
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.19
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.19
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.18
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.17
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.14
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	97.12
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.12
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	97.11
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	97.11
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.09
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	97.09
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	96.97
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	96.92
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	96.92
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.92
PRK13288	214	pyrophosphatase PpaX; Provisional	96.9
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	96.86
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	96.82
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	96.82
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	96.76
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	96.73
PRK14988	224	GMP/IMP nucleotidase; Provisional	96.69
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	96.69
PLN02575	381	haloacid dehalogenase-like hydrolase	96.67
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.66
PRK11587	218	putative phosphatase; Provisional	96.64
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	96.6
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.57
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	96.55
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	96.51
PRK13226	229	phosphoglycolate phosphatase; Provisional	96.48
PRK13225	273	phosphoglycolate phosphatase; Provisional	96.46
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	96.38
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	96.36
PLN02940	382	riboflavin kinase	96.36
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	96.31
PLN02423	245	phosphomannomutase	96.28
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	96.27
PRK13582	205	thrH phosphoserine phosphatase; Provisional	96.22
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	96.2
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	96.2
COG2503	274	Predicted secreted acid phosphatase [General funct	96.18
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.15
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.08
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	96.06
PRK13222	226	phosphoglycolate phosphatase; Provisional	96.05
PRK09449	224	dUMP phosphatase; Provisional	96.02
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.97
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	95.93
COG0546	220	Gph Predicted phosphatases [General function predi	95.9
PRK08238	479	hypothetical protein; Validated	95.88
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	95.76
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	95.75
COG4996	164	Predicted phosphatase [General function prediction	95.74
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	95.69
PRK08238	479	hypothetical protein; Validated	95.6
PRK13223	272	phosphoglycolate phosphatase; Provisional	95.55
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	95.54
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	95.38
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	95.33
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	95.26
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	95.2
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	95.03
PLN02811	220	hydrolase	95.02
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	94.94
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	94.93
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	94.93
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	94.89
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	94.84
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	94.76
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	94.71
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	94.67
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	94.63
COG4087	152	Soluble P-type ATPase [General function prediction	94.4
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	94.24
PLN03017	366	trehalose-phosphatase	94.16
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	94.13
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	94.11
PRK10563	221	6-phosphogluconate phosphatase; Provisional	93.9
COG4229	229	Predicted enolase-phosphatase [Energy production a	93.69
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	93.66
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	93.65
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	93.51
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	93.45
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	93.37
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	93.3
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	93.29
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	93.28
PLN02954	224	phosphoserine phosphatase	93.04
PLN02151	354	trehalose-phosphatase	93.03
PLN02382	413	probable sucrose-phosphatase	92.91
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	92.81
PRK10748	238	flavin mononucleotide phosphatase; Provisional	92.6
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	92.12
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	91.04
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	91.0
PLN02580	384	trehalose-phosphatase	90.88
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	90.32
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	90.27
COG4850	373	Uncharacterized conserved protein [Function unknow	90.24
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	90.2
PRK10671	834	copA copper exporting ATPase; Provisional	89.98
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	89.75
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	89.73
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	89.11
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	88.74
PRK05301	378	pyrroloquinoline quinone biosynthesis protein PqqE	88.67
PRK11133	322	serB phosphoserine phosphatase; Provisional	88.34
PRK11590	211	hypothetical protein; Provisional	88.27
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	88.17
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	88.1
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	87.54
PRK11590	211	hypothetical protein; Provisional	87.13
COG4359	220	Uncharacterized conserved protein [Function unknow	87.09
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	86.88
KOG2116	738	consensus Protein involved in plasmid maintenance/	86.39
TIGR02109	358	PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E.	86.32
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	85.95
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	85.75
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	85.16
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	85.02
PHA02597	197	30.2 hypothetical protein; Provisional	84.55
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	84.52
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	84.29
COG0731	296	Fe-S oxidoreductases [Energy production and conver	83.65
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	83.49
PF09587	250	PGA_cap: Bacterial capsule synthesis protein PGA_c	82.99
PRK01122	679	potassium-transporting ATPase subunit B; Provision	82.66
PRK01158	230	phosphoglycolate phosphatase; Provisional	82.51
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	82.42
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	81.95
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	81.74
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	81.74
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	81.43
PRK14010	673	potassium-transporting ATPase subunit B; Provision	81.31
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	80.25

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.3e-44  Score=333.64  Aligned_cols=224  Identities=25%  Similarity=0.392  Sum_probs=200.0

Q ss_pred             HHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCC-hhHHHHHHHh-CCCCccccccccccH
Q 019991           22 RHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKS-LGFDPSLFAGAITSG   99 (332)
Q Consensus        22 ~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~~~~~~L~~-lGl~~~~f~~Iits~   99 (332)
                      .++.+  +|++|+||+|||||+|.+++||+.++|+.|+++|+|++|+|||+++ ++.+.++|+. .|++.. .++|+||+
T Consensus         2 ~~~~~--~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~-~~~i~TS~   78 (269)
T COG0647           2 FDVMD--KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVT-PDDIVTSG   78 (269)
T ss_pred             cchhh--hcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCC-HHHeecHH
Confidence            35566  8999999999999999999999999999999999999999999964 5569999999 566677 49999999


Q ss_pred             HHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCC--ccEEEEecCCCCCCCCCCCcccCHHHHHHH
Q 019991          100 ELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEE--ADFILAHGTEGMGLPSGDVRPMSLQDLEKI  177 (332)
Q Consensus       100 ~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~--~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~  177 (332)
                      +++++||++..+      +++||++|.+.. ..++++.|++++++.+.  +++|++          |+|++++|+++.++
T Consensus        79 ~at~~~l~~~~~------~~kv~viG~~~l-~~~l~~~G~~~~~~~~~~~~d~Vv~----------g~d~~~~~e~l~~a  141 (269)
T COG0647          79 DATADYLAKQKP------GKKVYVIGEEGL-KEELEGAGFELVDEEEPARVDAVVV----------GLDRTLTYEKLAEA  141 (269)
T ss_pred             HHHHHHHHhhCC------CCEEEEECCcch-HHHHHhCCcEEeccCCCCcccEEEE----------ecCCCCCHHHHHHH
Confidence            999999999865      478999996543 35899999988764333  578888          78999999999999


Q ss_pred             HHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhH
Q 019991          178 LEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSL  252 (332)
Q Consensus       178 l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~D  252 (332)
                      +.. .++|+++|+||||..+|.++++.+++|++++.++.+ |+++.+.|||+|.+|+.|+++++.    .+||||++.||
T Consensus       142 ~~~-i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TD  220 (269)
T COG0647         142 LLA-IAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTD  220 (269)
T ss_pred             HHH-HHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhh
Confidence            986 577899999999999999998889999999999996 788889999999999999999997    59999999999


Q ss_pred             HHHHHHcCCcEEEE
Q 019991          253 LEGSMQLNLDLTVM  266 (332)
Q Consensus       253 I~gA~~aG~~ti~~  266 (332)
                      |.+|+++||+|+++
T Consensus       221 I~~a~~~G~~t~LV  234 (269)
T COG0647         221 ILGAKAAGLDTLLV  234 (269)
T ss_pred             HHHHHHcCCCEEEE
Confidence            99999999999988

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.8e-40  Score=304.47  Aligned_cols=232  Identities=17%  Similarity=0.243  Sum_probs=203.2

Q ss_pred             cccccHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCC-ccccc
Q 019991           16 QTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFD-PSLFA   93 (332)
Q Consensus        16 ~~~~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~-~~~f~   93 (332)
                      +..+..+++++  .+|+|+||+|||||.+..++||+.|+++.|++.|+.+.|+|||+. +++++.++++++|+. ..+ +
T Consensus        10 ~~~~~~~e~l~--~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e-~   86 (306)
T KOG2882|consen   10 SKSEEARELLD--SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKE-E   86 (306)
T ss_pred             hhHHHHHHHHh--hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCc-c
Confidence            33467889999  999999999999999999999999999999999999999999985 678999999999999 664 8


Q ss_pred             cccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccC-------------------CCCCccEEEEe
Q 019991           94 GAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE-------------------NVEEADFILAH  154 (332)
Q Consensus        94 ~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~-------------------~~~~~~~vv~~  154 (332)
                      +|++|..+.+.||++....     +++||++|.... ..+|++.|++...                   ...++.+||+ 
T Consensus        87 ~i~ssa~~~a~ylk~~~~~-----~k~Vyvig~~gi-~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvv-  159 (306)
T KOG2882|consen   87 NIFSSAYAIADYLKKRKPF-----GKKVYVIGEEGI-REELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVV-  159 (306)
T ss_pred             cccChHHHHHHHHHHhCcC-----CCeEEEecchhh-hHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEE-
Confidence            9999999999999887622     678988886433 2467777764310                   1234778999 


Q ss_pred             cCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCcEEEecCCccce-eccceecCCChhHHHHHHh-cCcccccCCCCHHHH
Q 019991          155 GTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTV-EARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWA  232 (332)
Q Consensus       155 ~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~lIaTN~D~~~~-~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if  232 (332)
                               |+|.+++|.++..++++|.+.++.+++||.|.+.| .++...+++|++++.++.+ +|+|.++|||++.|+
T Consensus       160 ---------g~D~hfsy~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~  230 (306)
T KOG2882|consen  160 ---------GYDEHFSYPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMF  230 (306)
T ss_pred             ---------ecccccCHHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHH
Confidence                     88999999999999999988899999999999887 4454679999999999995 999999999999999


Q ss_pred             HHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          233 TLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       233 ~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      +..++++++    ++|||||+.|||..|+++|++|+|+
T Consensus       231 ~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLv  268 (306)
T KOG2882|consen  231 EYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLV  268 (306)
T ss_pred             HHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEE
Confidence            999999998    7999999999999999999999987

>PRK10444 UMP phosphatase; Provisional

Probab=100.00  E-value=1.9e-37  Score=286.55  Aligned_cols=213  Identities=19%  Similarity=0.273  Sum_probs=187.5

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHHHHhh
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~  108 (332)
                      +++|+||+|||||++.+++||+.+++++|+++|++++++||++. +.+++.++|+++|++..+ ++++||+.+++.||++
T Consensus         1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~L~~   79 (248)
T PRK10444          1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFLRR   79 (248)
T ss_pred             CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH-hhEecHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999985 668899999999999885 8999999999999998


Q ss_pred             cCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCcE
Q 019991          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM  188 (332)
Q Consensus       109 ~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~l  188 (332)
                      ..       +.++|++|.... ..++++.|+++.+  +++++|++          |+|.+++|+++..+.+.+ ++|+++
T Consensus        80 ~~-------~~~v~~~g~~~l-~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~~~~l~~a~~~l-~~g~~~  138 (248)
T PRK10444         80 QE-------GKKAYVIGEGAL-IHELYKAGFTITD--INPDFVIV----------GETRSYNWDMMHKAAYFV-ANGARF  138 (248)
T ss_pred             CC-------CCEEEEEcCHHH-HHHHHHCcCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCEE
Confidence            63       467888886432 3467888887653  47789999          567899999999999875 779999


Q ss_pred             EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE
Q 019991          189 VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL  263 (332)
Q Consensus       189 IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t  263 (332)
                      |+||||...+   ++.+++|+++++++.+ |+++...|||+|.+|+.+++++++    ++||||++.+||++|+++|+++
T Consensus       139 i~~n~D~~~~---g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~  215 (248)
T PRK10444        139 IATNPDTHGR---GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLET  215 (248)
T ss_pred             EEECCCCCCC---CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCE
Confidence            9999999754   3568999999999996 888888999999999999999987    6999999989999999999999


Q ss_pred             EEEe
Q 019991          264 TVME  267 (332)
Q Consensus       264 i~~~  267 (332)
                      +++.
T Consensus       216 vlV~  219 (248)
T PRK10444        216 ILVL  219 (248)
T ss_pred             EEEC
Confidence            9994

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=100.00  E-value=3.8e-37  Score=284.77  Aligned_cols=218  Identities=17%  Similarity=0.248  Sum_probs=193.0

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHHhh
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~  108 (332)
                      |++|+||+|||||++..++||+.++|++|+++|++++|+|||+ ++.+.+.++|+++|++... ++|++++.++.+||++
T Consensus         1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~-~~iit~~~~~~~~l~~   79 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATL-ETVFTASMATADYMND   79 (249)
T ss_pred             CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEeeHHHHHHHHHHh
Confidence            5799999999999999999999999999999999999999987 6778899999999999884 9999999999999998


Q ss_pred             cCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCcE
Q 019991          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM  188 (332)
Q Consensus       109 ~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~l  188 (332)
                      ...      +++++++|.... ..++++.|+++.+  +++++|++          |++..++|+++..+++.+ ++|+++
T Consensus        80 ~~~------~~~v~~lg~~~l-~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~y~~l~~a~~~l-~~g~~~  139 (249)
T TIGR01457        80 LKL------EKTVYVIGEEGL-KEAIKEAGYVEDK--EKPDYVVV----------GLDRQIDYEKFATATLAI-RKGAHF  139 (249)
T ss_pred             cCC------CCEEEEEcChhH-HHHHHHcCCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCeE
Confidence            754      467888886432 3477888886543  57889999          567889999999999875 679999


Q ss_pred             EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE
Q 019991          189 VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL  263 (332)
Q Consensus       189 IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t  263 (332)
                      |+||+|..+|..++..+++|++.++++.+ ++++...|||+|.+|+.+++++++    .+||||++.+||.+|+++|+++
T Consensus       140 i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~  219 (249)
T TIGR01457       140 IGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDT  219 (249)
T ss_pred             EEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcE
Confidence            99999999997766668999999999985 888999999999999999999987    6999999889999999999999


Q ss_pred             EEEec
Q 019991          264 TVMEK  268 (332)
Q Consensus       264 i~~~~  268 (332)
                      +|+..
T Consensus       220 v~v~~  224 (249)
T TIGR01457       220 LLVHT  224 (249)
T ss_pred             EEEcC
Confidence            99953

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=100.00  E-value=5.1e-36  Score=281.48  Aligned_cols=222  Identities=18%  Similarity=0.203  Sum_probs=187.7

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~  107 (332)
                      ++++|+||+|||||++..++||+.++|+.|+++|++++++|||+. +..++..+|+++|+.... +++++|+.++..||+
T Consensus         1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~l~   79 (279)
T TIGR01452         1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA-EQLFSSALCAARLLR   79 (279)
T ss_pred             CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEecHHHHHHHHHH
Confidence            488999999999999999999999999999999999999999874 567888999999999885 899999999999999


Q ss_pred             hcCChhhhhcCCeEEEeecCcccchhhhcCCccccCC------------------CCCccEEEEecCCCCCCCCCCCccc
Q 019991          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN------------------VEEADFILAHGTEGMGLPSGDVRPM  169 (332)
Q Consensus       108 ~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~------------------~~~~~~vv~~~~~~~~~~~g~d~~~  169 (332)
                      +...+     +.+++++|.... ..++++.|++....                  .+++++|++          |.|.++
T Consensus        80 ~~~~~-----~~~v~~iG~~~~-~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv----------~~d~~~  143 (279)
T TIGR01452        80 QPPDA-----PKAVYVIGEEGL-RAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVV----------GYDEHF  143 (279)
T ss_pred             hhCcC-----CCEEEEEcCHHH-HHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEE----------ecCCCC
Confidence            84221     467888886432 34677777764321                  136788998          678999


Q ss_pred             CHHHHHHHHHHHHhCCCcEEEecCCccceeccc-eecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      +|+++.++++.|+++|+++|+||+|..++.... ..++.|.+.+.++.+ |+++...|||+|.+|+.+++++|+    ++
T Consensus       144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~l  223 (279)
T TIGR01452       144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTL  223 (279)
T ss_pred             CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEE
Confidence            999999999998778988899999998775443 245677777777774 888888999999999999999987    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||++.+||++|+++||+++++.
T Consensus       224 mIGD~~~tDI~~A~~aGi~si~V~  247 (279)
T TIGR01452       224 MVGDRLETDILFGHRCGMTTVLVL  247 (279)
T ss_pred             EECCChHHHHHHHHHcCCcEEEEC
Confidence            999999899999999999999993

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02645 phosphoglycolate phosphatase

Probab=100.00  E-value=6.6e-36  Score=284.94  Aligned_cols=237  Identities=16%  Similarity=0.161  Sum_probs=196.1

Q ss_pred             ccccccccHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccc
Q 019991           13 HLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSL   91 (332)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~   91 (332)
                      .++++.++++++++  +|++|+||+|||||++..++||+.++|++|+++|++++++||++. +.+++.++|+++|++.. 
T Consensus        13 ~~~~~~~~~~~~~~--~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~-   89 (311)
T PLN02645         13 AQLLTLENADELID--SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT-   89 (311)
T ss_pred             cccCCHHHHHHHHH--hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC-
Confidence            34468889999999  899999999999999999999999999999999999999999884 66788899999999988 


Q ss_pred             cccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccC------------------CCCCccEEEE
Q 019991           92 FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE------------------NVEEADFILA  153 (332)
Q Consensus        92 f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~------------------~~~~~~~vv~  153 (332)
                      +++|++++..+..||++...+.    ++++|++|.... ..+++..|++...                  ...+.++|++
T Consensus        90 ~~~I~ts~~~~~~~l~~~~~~~----~~~V~viG~~~~-~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvv  164 (311)
T PLN02645         90 EEEIFSSSFAAAAYLKSINFPK----DKKVYVIGEEGI-LEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVV  164 (311)
T ss_pred             hhhEeehHHHHHHHHHhhccCC----CCEEEEEcCHHH-HHHHHHCCCEEecCccccccccccccccccccCCCCCEEEE
Confidence            4999999999999998753210    356888775322 2466666764321                  1134578888


Q ss_pred             ecCCCCCCCCCCCcccCHHHHHHHHHHHHh-CCCcEEEecCCccceeccc-eecCCChhHHHHHHh-cCcccccCCCCHH
Q 019991          154 HGTEGMGLPSGDVRPMSLQDLEKILEICAS-KKIPMVVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKL  230 (332)
Q Consensus       154 ~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~-~g~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e~~-g~e~~~~GKP~p~  230 (332)
                                |+|++++|+++..+.+.+.. +|+++|+||+|..++.... ..++.|++.+.++.. ++++..+|||+|.
T Consensus       165 ----------g~d~~~~~~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~  234 (311)
T PLN02645        165 ----------GFDRYINYYKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTF  234 (311)
T ss_pred             ----------ecCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHH
Confidence                      67899999999999987654 6899999999998754333 357788888877775 7788889999999


Q ss_pred             HHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          231 WATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       231 if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      +|+.+++++++    .+||||++.+||++|+++||+++++.
T Consensus       235 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~  275 (311)
T PLN02645        235 MMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVL  275 (311)
T ss_pred             HHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEc
Confidence            99999999987    69999999899999999999999993

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=100.00  E-value=1.4e-35  Score=272.83  Aligned_cols=234  Identities=24%  Similarity=0.352  Sum_probs=190.3

Q ss_pred             HHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc-cccccccccH
Q 019991           21 LRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP-SLFAGAITSG   99 (332)
Q Consensus        21 ~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~-~~f~~Iits~   99 (332)
                      ++++++  +|++|+||+||||+++..++||+.++|++|+++|++++++||++++...+.++|+++|++. . |+.|++++
T Consensus         1 ~~~~~~--~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~   77 (242)
T TIGR01459         1 IFDLIN--DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSG   77 (242)
T ss_pred             Chhhhh--cCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccH
Confidence            467889  9999999999999999999999999999999999999999998877666778999999997 6 68999999


Q ss_pred             HHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHH
Q 019991          100 ELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILE  179 (332)
Q Consensus       100 ~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~  179 (332)
                      ++...++....... -.-+.+++++|.+..+...+++.+....++.+++++|++.+.        .+..++|+++.++++
T Consensus        78 ~~~~~~l~~~~~~~-~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~--------~~~~~~~~~~~~~l~  148 (242)
T TIGR01459        78 EIAVQMILESKKRF-DIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRS--------ENEKLDLDEFDELFA  148 (242)
T ss_pred             HHHHHHHHhhhhhc-cCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCC--------CcccCCHHHHHHHHH
Confidence            99888876431100 001356787786543334565655543332346777888431        235689999999999


Q ss_pred             HHHhCCCcEEEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC-----eEEEeCChhhHHH
Q 019991          180 ICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV-----QMQLESSPYSLLE  254 (332)
Q Consensus       180 ~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~-----~lmIGDs~~~DI~  254 (332)
                      .+.++|+++|+||+|..++......++.|.+...++.+|.++...|||+|.+|+.++++++.     .+||||++.+||+
T Consensus       149 ~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~  228 (242)
T TIGR01459       149 PIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDIL  228 (242)
T ss_pred             HHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHH
Confidence            88888999999999999997655668888888888877778878999999999999999974     5899999889999


Q ss_pred             HHHHcCCcEEEE
Q 019991          255 GSMQLNLDLTVM  266 (332)
Q Consensus       255 gA~~aG~~ti~~  266 (332)
                      +|+++|++++|+
T Consensus       229 ~a~~~G~~~i~v  240 (242)
T TIGR01459       229 GANRLGIDTALV  240 (242)
T ss_pred             HHHHCCCeEEEE
Confidence            999999999997

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=100.00  E-value=1.1e-33  Score=259.65  Aligned_cols=216  Identities=27%  Similarity=0.399  Sum_probs=181.7

Q ss_pred             EEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHh-CCCCccccccccccHHHHHHHHhhcC
Q 019991           33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKS-LGFDPSLFAGAITSGELTHQYLLRRD  110 (332)
Q Consensus        33 vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~-lGl~~~~f~~Iits~~v~~~~L~~~~  110 (332)
                      |+||+||||+++..++||+.++|+.++++|+++.++||++ ++.+++.++|.+ +|++... +++++|+.++..||+++.
T Consensus         1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~-~~iits~~~~~~~l~~~~   79 (236)
T TIGR01460         1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSP-DQIITSGSVTKDLLRQRF   79 (236)
T ss_pred             CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCH-HHeeeHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999988 677889999998 8999884 999999999999999765


Q ss_pred             ChhhhhcCCeEEEeecCcccchhhhcCCccc--cCC------CCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 019991          111 DAWFAALGRSCIHMTWSDRGAISLEGLGLKV--VEN------VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (332)
Q Consensus       111 ~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~--~~~------~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~  182 (332)
                      .      |++++++|.+.. ..++++.|++.  .++      ...+++|++          |.+.+++|..+..+.+.+ 
T Consensus        80 ~------~~~v~v~G~~~~-~~~l~~~g~~~~~~~~~~~~~~~~~~~~vv~----------~~~~~~~~~~~~~a~~~l-  141 (236)
T TIGR01460        80 E------GEKVYVIGVGEL-RESLEGLGFRNDFFDDIDHLAIEKIPAAVIV----------GEPSDFSYDELAKAAYLL-  141 (236)
T ss_pred             C------CCEEEEECCHHH-HHHHHHcCCcCcccCcccccccCCCCeEEEE----------CCCCCcCHHHHHHHHHHH-
Confidence            3      567888886432 34788888751  110      122466777          567889999999999865 


Q ss_pred             hCC-CcEEEecCCccceeccc-eecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----e-EEEeCChhhHHH
Q 019991          183 SKK-IPMVVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q-MQLESSPYSLLE  254 (332)
Q Consensus       183 ~~g-~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~-lmIGDs~~~DI~  254 (332)
                      +++ +++++||+|..++...+ ..++.|++.+.++.+ ++++...|||+|.+|+.++++++.    . +||||++.+||+
T Consensus       142 ~~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~  221 (236)
T TIGR01460       142 AEGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDIL  221 (236)
T ss_pred             hCCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHH
Confidence            556 89999999986665555 678899999999986 777778999999999999999986    4 899999889999


Q ss_pred             HHHHcCCcEEEEe
Q 019991          255 GSMQLNLDLTVME  267 (332)
Q Consensus       255 gA~~aG~~ti~~~  267 (332)
                      +|+++|++++|+.
T Consensus       222 ~A~~~G~~~i~v~  234 (236)
T TIGR01460       222 GAKNAGFDTLLVL  234 (236)
T ss_pred             HHHHCCCcEEEEe
Confidence            9999999999984

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=100.00  E-value=3.1e-33  Score=259.80  Aligned_cols=213  Identities=16%  Similarity=0.225  Sum_probs=178.4

Q ss_pred             ccEEEEeccceeecCCc----cCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           30 FKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~----~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      +++|+||+|||||++..    ++||+.++|++|+++|++++++||++. +.+++.++|+.+|++..+ ++|+||+++++.
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~-~~i~ts~~~~~~   79 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISE-DEVFTPAPAARQ   79 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCH-HHeEcHHHHHHH
Confidence            46899999999999988    999999999999999999999999885 557889999999999885 999999999999


Q ss_pred             HHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCC-cccCHHHHHHHHHHHHh
Q 019991          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDV-RPMSLQDLEKILEICAS  183 (332)
Q Consensus       105 ~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d-~~~~y~~l~~~l~~l~~  183 (332)
                      ||++.+        .++|+++.+.. ..++.+  +.    .+++++|++          |.+ .+++|+++.++++.|.+
T Consensus        80 ~l~~~~--------~~~~~~g~~~~-~~~~~~--~~----~~~~~~Vv~----------g~~~~~~~y~~l~~a~~~L~~  134 (257)
T TIGR01458        80 LLEEKQ--------LRPMLLVDDRV-LPDFDG--ID----TSDPNCVVM----------GLAPEHFSYQILNQAFRLLLD  134 (257)
T ss_pred             HHHhcC--------CCeEEEECccH-HHHhcc--CC----CCCCCEEEE----------ecccCccCHHHHHHHHHHHHc
Confidence            999863        35677665322 224442  21    246788888          454 47999999999998877


Q ss_pred             CCCc-EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHH
Q 019991          184 KKIP-MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSM  257 (332)
Q Consensus       184 ~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~  257 (332)
                      .+.+ +++||+|..++...+..++.|.+.+.++.. +.++...|||+|.+|+.+++++++    .+||||++.+||++|+
T Consensus       135 ~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~  214 (257)
T TIGR01458       135 GAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQ  214 (257)
T ss_pred             CCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHH
Confidence            7766 588999999887665567888888888875 778888899999999999999987    6999999889999999


Q ss_pred             HcCCcEEEEec
Q 019991          258 QLNLDLTVMEK  268 (332)
Q Consensus       258 ~aG~~ti~~~~  268 (332)
                      ++||+++|+..
T Consensus       215 ~~G~~~i~v~~  225 (257)
T TIGR01458       215 DCGMRGIQVRT  225 (257)
T ss_pred             HcCCeEEEECC
Confidence            99999999953

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=100.00  E-value=3.4e-32  Score=260.49  Aligned_cols=216  Identities=21%  Similarity=0.260  Sum_probs=172.3

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHC----CCeEEEEeCCC-CChhHHHHHH-HhCCCCccccccccccHHHHHHH
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSS-RRASTTIDKL-KSLGFDPSLFAGAITSGELTHQY  105 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~----G~~v~~vTN~s-~~~~~~~~~L-~~lGl~~~~f~~Iits~~v~~~~  105 (332)
                      +|+||+|||||++..++||+.++++.|++.    |+++.++||++ ++.+++.++| +++|++... ++++++..++..+
T Consensus         2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~-~~i~~s~~~~~~l   80 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSP-LQVIQSHSPYKSL   80 (321)
T ss_pred             EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCH-HHHHhhhHHHHHH
Confidence            699999999999999999999999999998    99999999987 4667777877 899999885 8999999888777


Q ss_pred             HhhcCChhhhhcCCeEEEeecCcccchhhhcCCcccc----------CC-----------------------CCCccEEE
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVV----------EN-----------------------VEEADFIL  152 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~----------~~-----------------------~~~~~~vv  152 (332)
                      +++..        .+++++|.+.. ..+++..|++..          ++                       ..++++|+
T Consensus        81 l~~~~--------~~v~viG~~~~-~~~l~~~G~~~vv~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv  151 (321)
T TIGR01456        81 VNKYE--------KRILAVGTGSV-RGVAEGYGFQNVVHQDEIVRYFRDIDPFSGMSDEQVREYSRDIPDLTTKRFDAVL  151 (321)
T ss_pred             HHHcC--------CceEEEeChHH-HHHHHHcCCcccccHHHHHhcCCCCCcccccCHHHhhcccccccccCCCceeEEE
Confidence            75442        35666665432 235556665411          00                       13578888


Q ss_pred             EecCCCCCCCCCCCcccCHHHHHHHHHHHHhC----------CCcEEEecCCccceeccc-eecCCChhHHHHHH----h
Q 019991          153 AHGTEGMGLPSGDVRPMSLQDLEKILEICASK----------KIPMVVANPDYVTVEARA-LRVMPGTLASKFEK----L  217 (332)
Q Consensus       153 ~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~----------g~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e~----~  217 (332)
                      +          |.|....|.+++.+.+.+...          ++++++||+|..+|...+ +++++|++.++++.    +
T Consensus       152 v----------~~d~~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~  221 (321)
T TIGR01456       152 V----------FNDPVDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLEL  221 (321)
T ss_pred             E----------ecCchHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHh
Confidence            8          445666778888888876542          278999999999998777 47899999998887    3


Q ss_pred             -cCcc--cccCCCCHHHHHHHHHHh--------C---------CeEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          218 -GGEV--RWMGKPDKLWATLFTMIL--------R---------VQMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       218 -g~e~--~~~GKP~p~if~~Al~~l--------g---------~~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                       |+++  ..+|||+|.+|+.|++++        +         -++||||++.+||.||+++||+|+++.
T Consensus       222 tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~  291 (321)
T TIGR01456       222 NGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVK  291 (321)
T ss_pred             cCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEec
Confidence             5543  678999999999999887        2         268999999999999999999999995

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.97  E-value=2.2e-30  Score=226.79  Aligned_cols=214  Identities=20%  Similarity=0.274  Sum_probs=184.2

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~  107 (332)
                      .++++++|+-|||+.+..++||+.|+++.|+.++.++.|+||.+. +.+.+.++|+++|+...+ ++|+||..++++|++
T Consensus         6 ~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~e-eei~tsl~aa~~~~~   84 (262)
T KOG3040|consen    6 AVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSE-EEIFTSLPAARQYLE   84 (262)
T ss_pred             ccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccH-HHhcCccHHHHHHHH
Confidence            689999999999999999999999999999999999999999986 557889999999999996 999999999999998


Q ss_pred             hcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCC-C
Q 019991          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK-I  186 (332)
Q Consensus       108 ~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g-~  186 (332)
                      ++.-       +..+++..+.  ...+.+.+      -.++++||++..         .+.|+|+.+.++++.|++.. .
T Consensus        85 ~~~l-------rP~l~v~d~a--~~dF~gid------Ts~pn~VVigla---------pe~F~y~~ln~AFrvL~e~~k~  140 (262)
T KOG3040|consen   85 ENQL-------RPYLIVDDDA--LEDFDGID------TSDPNCVVIGLA---------PEGFSYQRLNRAFRVLLEMKKP  140 (262)
T ss_pred             hcCC-------CceEEEcccc--hhhCCCcc------CCCCCeEEEecC---------cccccHHHHHHHHHHHHcCCCC
Confidence            8753       3444433221  11233221      247889999422         37899999999999888765 4


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      ++|+.++-+++.+..++-+++|.+++.++++ |.++.++|||+|.+|+.|++.+|+    .+||||++..|+-||+++||
T Consensus       141 ~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GM  220 (262)
T KOG3040|consen  141 LLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGM  220 (262)
T ss_pred             eEEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcc
Confidence            5899999999999888889999999999996 999999999999999999999998    59999999999999999999


Q ss_pred             cEEEEe
Q 019991          262 DLTVME  267 (332)
Q Consensus       262 ~ti~~~  267 (332)
                      +.|++-
T Consensus       221 rgilVk  226 (262)
T KOG3040|consen  221 RGILVK  226 (262)
T ss_pred             eeEEee
Confidence            999883

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=99.83  E-value=2e-20  Score=150.00  Aligned_cols=100  Identities=30%  Similarity=0.464  Sum_probs=83.3

Q ss_pred             EEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHHHHhhcCC
Q 019991           33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD  111 (332)
Q Consensus        33 vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~~~  111 (332)
                      |+||+|||||++.+++|||.|+|++|+++|++++|+|||++ +++++.++|+++|++..+ ++|+||+++++.||+++..
T Consensus         1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-~~i~ts~~~~~~~l~~~~~   79 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-DEIITSGMAAAEYLKEHKG   79 (101)
T ss_dssp             EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G-GGEEEHHHHHHHHHHHHTT
T ss_pred             CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc-CEEEChHHHHHHHHHhcCC
Confidence            79999999999999999999999999999999999999985 668999999999999986 9999999999999998643


Q ss_pred             hhhhhcCCeEEEeecCcccchhhhcCCcc
Q 019991          112 AWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus       112 ~~~~~~G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                            ++++|++|.+.. ..++++.|++
T Consensus        80 ------~~~v~vlG~~~l-~~~l~~~G~e  101 (101)
T PF13344_consen   80 ------GKKVYVLGSDGL-REELREAGFE  101 (101)
T ss_dssp             ------SSEEEEES-HHH-HHHHHHTTEE
T ss_pred             ------CCEEEEEcCHHH-HHHHHHcCCC
Confidence                  678998886432 3477777763

...

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=99.82  E-value=2.9e-19  Score=165.64  Aligned_cols=221  Identities=23%  Similarity=0.301  Sum_probs=153.9

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHC----CCeEEEEeCCCCCh-hHHHHHHH-hCCCCccccccccccHHHHHHH
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSSRRA-STTIDKLK-SLGFDPSLFAGAITSGELTHQY  105 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~----G~~v~~vTN~s~~~-~~~~~~L~-~lGl~~~~f~~Iits~~v~~~~  105 (332)
                      +|.||+||||.+|..++||+.++++.|.+.    .+|++++||++... ..-++.|+ .+|....+ ++++.|....+.+
T Consensus        37 gfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~-dqviqSHsP~r~l  115 (389)
T KOG1618|consen   37 GFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSA-DQVIQSHSPFRLL  115 (389)
T ss_pred             eEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCH-HHHHhhcChHHHH
Confidence            899999999999999999999999999998    89999999987433 33455664 58999986 8999998888877


Q ss_pred             HhhcCChhhhhcCCeEEEeecCcccchhhhcCCccc-----------------------------cC--C-CCCccEEEE
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKV-----------------------------VE--N-VEEADFILA  153 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~-----------------------------~~--~-~~~~~~vv~  153 (332)
                      ...++ ..++++|+       ++. ....++.|++-                             ..  + ....++|++
T Consensus       116 ~~~~~-k~vLv~G~-------~~v-r~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~~  186 (389)
T KOG1618|consen  116 VEYHY-KRVLVVGQ-------GSV-REVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVLL  186 (389)
T ss_pred             hhhhh-ceEEEecC-------CcH-HHHhhccCccceeeHHHHHHhCCCcccccchhHhhhcccchhccccccceeEEEE
Confidence            63333 23344443       221 11233333210                             00  0 234566655


Q ss_pred             -ecCCCCCCCCCCCcccCHHHHHHHHHHHHhC--------------CCcEEEecCCccceeccc-eecCCChhHHHHH--
Q 019991          154 -HGTEGMGLPSGDVRPMSLQDLEKILEICASK--------------KIPMVVANPDYVTVEARA-LRVMPGTLASKFE--  215 (332)
Q Consensus       154 -~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~--------------g~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e--  215 (332)
                       .++.+|+           .+++-+++.+...              .+|++++|.|..|+.+.+ +++++|++.-.++  
T Consensus       187 ~~dPv~W~-----------~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesi  255 (389)
T KOG1618|consen  187 LGDPVRWE-----------TDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESI  255 (389)
T ss_pred             ecCchhhh-----------hhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHH
Confidence             5667776           3444444433222              247899999999998877 6799998765544  


Q ss_pred             --Hh-cCc--ccccCCCCHHHHHHHHHHhC--------C-----eEEEeCChhhHHHHHH---------------HcCCc
Q 019991          216 --KL-GGE--VRWMGKPDKLWATLFTMILR--------V-----QMQLESSPYSLLEGSM---------------QLNLD  262 (332)
Q Consensus       216 --~~-g~e--~~~~GKP~p~if~~Al~~lg--------~-----~lmIGDs~~~DI~gA~---------------~aG~~  262 (332)
                        .+ |..  ...+|||++..|++|...+.        .     ..||||++.+||.||+               +.||-
T Consensus       256 y~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~  335 (389)
T KOG1618|consen  256 YQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWI  335 (389)
T ss_pred             HHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCce
Confidence              44 432  36799999999999976442        1     3699999999999998               67777


Q ss_pred             EEEEecchhhHHHHHHHhh
Q 019991          263 LTVMEKLQIYLLFKLLYLN  281 (332)
Q Consensus       263 ti~~~~~~~~~~~~~~~~~  281 (332)
                      ||++.        .|||-+
T Consensus       336 SILV~--------TGV~~~  346 (389)
T KOG1618|consen  336 SILVR--------TGVYNG  346 (389)
T ss_pred             EEEEe--------eeeecC
Confidence            77764        577763

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.62  E-value=1.4e-15  Score=135.44  Aligned_cols=92  Identities=14%  Similarity=0.039  Sum_probs=75.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||.+... . .  .+...++..+|+.+ +++....+||+|.+|..+++++|+    .+
T Consensus       106 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~-~--~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~  181 (203)
T TIGR02252       106 VYPDAIKLLKDLRERGLILGVISNFDSRL-R-G--LLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL  181 (203)
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCchhH-H-H--HHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence            3588999999998889885 889987542 1 1  24445677788875 667778899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEE
Q 019991          244 QLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      ||||++.+||++|+++||++||
T Consensus       182 ~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       182 HIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             EECCCchHHHHHHHHcCCeeeC
Confidence            9999987899999999999987

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.61  E-value=2.4e-15  Score=135.43  Aligned_cols=97  Identities=10%  Similarity=0.032  Sum_probs=80.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||.+......   .+...++..+|+.+ +++....+||+|.+|..+++++|+    ++
T Consensus        95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  171 (221)
T TIGR02253        95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWE---KLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV  171 (221)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHH---HHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence            3578899999998889885 889987543322   24455688888875 777778899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||||++.+||++|+++|+++||++..
T Consensus       172 ~igDs~~~di~~A~~aG~~~i~~~~~  197 (221)
T TIGR02253       172 MVGDRLDKDIKGAKNLGMKTVWINQG  197 (221)
T ss_pred             EECCChHHHHHHHHHCCCEEEEECCC
Confidence            99999878999999999999999653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.60  E-value=6.7e-16  Score=143.85  Aligned_cols=93  Identities=15%  Similarity=0.148  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|+++ |+||........   .+...++..+|+.+ +++....+||+|++|..|++++|+    ++|
T Consensus       111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~---~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~  187 (260)
T PLN03243        111 RPGSREFVQALKKHEIPIAVASTRPRRYLER---AIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV  187 (260)
T ss_pred             CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHH---HHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence            578999999998899985 889976653332   24445688888885 777777899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEe
Q 019991          245 LESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      |||+ .+||++|+++||++|++.
T Consensus       188 IgDs-~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        188 FGNS-NSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             EcCC-HHHHHHHHHcCCEEEEEe
Confidence            9999 589999999999999996

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.59  E-value=8.6e-16  Score=149.42  Aligned_cols=95  Identities=17%  Similarity=0.217  Sum_probs=80.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...++..+|+.+ +.+....+||+|++|..+++++|+    ++
T Consensus       217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~---~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl  293 (381)
T PLN02575        217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLEN---AIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI  293 (381)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            3588999999999999986 889987654432   25555688899985 777778899999999999999997    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||+. .||++|+++||++|++..
T Consensus       294 ~IGDS~-~DIeAAk~AGm~~IgV~~  317 (381)
T PLN02575        294 VFGNSN-QTVEAAHDARMKCVAVAS  317 (381)
T ss_pred             EEcCCH-HHHHHHHHcCCEEEEECC
Confidence            999995 799999999999999963

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.57  E-value=3.4e-15  Score=135.82  Aligned_cols=97  Identities=18%  Similarity=0.185  Sum_probs=77.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      ..+++.++++.|..+|+++ ++||+.+.....   .+..-++..+|+.+ .++....|||+|++|..|++++|+    .+
T Consensus        87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~---~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv  163 (221)
T COG0637          87 PIPGVVELLEQLKARGIPLAVASSSPRRAAER---VLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV  163 (221)
T ss_pred             CCccHHHHHHHHHhcCCcEEEecCChHHHHHH---HHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence            3478999999998899886 566655432221   24455688889884 778888889999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      +|+|++ .+|++|++|||.++.+....
T Consensus       164 viEDs~-~Gi~Aa~aAGm~vv~v~~~~  189 (221)
T COG0637         164 VVEDSP-AGIQAAKAAGMRVVGVPAGH  189 (221)
T ss_pred             EEecch-hHHHHHHHCCCEEEEecCCC
Confidence            999995 78999999999999997533

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.57  E-value=1.3e-15  Score=140.81  Aligned_cols=95  Identities=17%  Similarity=0.117  Sum_probs=79.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...++..+|+.+ +++....+||+|++|..+++++|+    .+
T Consensus       109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~---~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l  185 (248)
T PLN02770        109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAEL---MISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF  185 (248)
T ss_pred             cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHH---HHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence            3688999999998999985 899987664432   24455688888885 777777899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++ .||++|+++|+++|++..
T Consensus       186 ~vgDs~-~Di~aA~~aGi~~i~v~~  209 (248)
T PLN02770        186 VFEDSV-SGIKAGVAAGMPVVGLTT  209 (248)
T ss_pred             EEcCCH-HHHHHHHHCCCEEEEEeC
Confidence            999996 899999999999999953

>PRK11587 putative phosphatase; Provisional

Probab=99.56  E-value=1.9e-15  Score=136.66  Aligned_cols=94  Identities=18%  Similarity=0.161  Sum_probs=71.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|+++ |+||........   .+....+ ..++.+ +++....+||+|.+|..+++++|+    .+
T Consensus        84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~---~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l  159 (218)
T PRK11587         84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASA---RHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV  159 (218)
T ss_pred             eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHH---HHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence            3688999999998999986 889876532211   1222222 223333 555566789999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++ .||++|+++|+++|+++.
T Consensus       160 ~igDs~-~di~aA~~aG~~~i~v~~  183 (218)
T PRK11587        160 VVEDAP-AGVLSGLAAGCHVIAVNA  183 (218)
T ss_pred             EEecch-hhhHHHHHCCCEEEEECC
Confidence            999995 899999999999999964

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.56  E-value=8.8e-15  Score=134.30  Aligned_cols=92  Identities=16%  Similarity=0.096  Sum_probs=76.2

Q ss_pred             CHHHHHHHHHHHHhCCCc-EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++|+.|+++ .+ .|+||.+...        ...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus       114 ~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~--------~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~  184 (238)
T PRK10748        114 VPQATHDTLKQLAKK-WPLVAITNGNAQP--------ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL  184 (238)
T ss_pred             CCccHHHHHHHHHcC-CCEEEEECCCchH--------HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence            467899999988655 56 5889976531        233578888885 777777899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||||++..||++|+++||+++|+++..
T Consensus       185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~  211 (238)
T PRK10748        185 HVGDDLTTDVAGAIRCGMQACWINPEN  211 (238)
T ss_pred             EEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence            999998789999999999999998754

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.54  E-value=7.6e-15  Score=132.35  Aligned_cols=95  Identities=14%  Similarity=0.045  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH--HHHHHh-cCcccccCCCCHHHHHHHHHHhCC----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEKL-GGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~--~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...++.  .+|+.+ +.+....+||+|.+|+.+++++|+    
T Consensus        88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~---~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  164 (220)
T TIGR03351        88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAER---LLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQ  164 (220)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCchHHHHH---HHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChh
Confidence            3578899999998899985 889876653332   23333455  667764 666667899999999999999986    


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcE-EEEec
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDL-TVMEK  268 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~t-i~~~~  268 (332)
                       ++||||++ +||++|+++||.+ +++..
T Consensus       165 ~~~~igD~~-~Di~aa~~aG~~~~i~~~~  192 (220)
T TIGR03351       165 SVAVAGDTP-NDLEAGINAGAGAVVGVLT  192 (220)
T ss_pred             HeEEeCCCH-HHHHHHHHCCCCeEEEEec
Confidence             49999996 8999999999999 77743

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.54  E-value=7.9e-15  Score=135.41  Aligned_cols=94  Identities=9%  Similarity=0.029  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHh-cCcccccCCCCHHHHHHHHHHhCC-----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKL-GGEVRWMGKPDKLWATLFTMILRV-----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~-g~e~~~~GKP~p~if~~Al~~lg~-----  241 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...++..+| +.+ +++....+||+|++|..+++++|+     
T Consensus       100 ~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~---~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422       100 PIPGVIEVIAYLRARGIKIGSTTGYTREMMDV---VAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEECCCcHHHHHH---HHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            3688999999998999985 889876653321   12222344553 554 777777899999999999999996     


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ++||||++ +||++|+++|+++|++.
T Consensus       177 ~l~IGDs~-~Di~aA~~aGi~~i~v~  201 (253)
T TIGR01422       177 CVKVGDTV-PDIEEGRNAGMWTVGLI  201 (253)
T ss_pred             eEEECCcH-HHHHHHHHCCCeEEEEe
Confidence            48999996 89999999999999995

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.53  E-value=8.2e-15  Score=133.68  Aligned_cols=93  Identities=12%  Similarity=0.040  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|.++ |+||........   .+...++..+|+.+ +++....+||+|++|..+++++|+    .+|
T Consensus        97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~  173 (229)
T PRK13226         97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARL---ILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY  173 (229)
T ss_pred             CCCHHHHHHHHHHCCCeEEEECCCCHHHHHH---HHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence            578899999998899885 889976543321   23334566677764 666667899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEe
Q 019991          245 LESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      |||+. +||++|+++|+++|++.
T Consensus       174 IGDs~-~Di~aA~~aG~~~i~v~  195 (229)
T PRK13226        174 VGDDE-RDILAARAAGMPSVAAL  195 (229)
T ss_pred             eCCCH-HHHHHHHHCCCcEEEEe
Confidence            99995 89999999999999884

>PRK09449 dUMP phosphatase; Provisional

Probab=99.53  E-value=9.8e-15  Score=131.98  Aligned_cols=96  Identities=17%  Similarity=0.126  Sum_probs=77.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC-----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV-----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~-----~  242 (332)
                      .|+++.++++.|+ ++.++ |+||........   .+..-++..+|+.+ +++.....||+|.+|+.+++++|+     .
T Consensus        96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~---~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  171 (224)
T PRK09449         96 PLPGAVELLNALR-GKVKMGIITNGFTELQQV---RLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV  171 (224)
T ss_pred             cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHH---HHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence            3688999999987 56775 889976543322   24455688889885 777777899999999999999985     4


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +||||++.+||++|+++||+++|++..
T Consensus       172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~  198 (224)
T PRK09449        172 LMVGDNLHSDILGGINAGIDTCWLNAH  198 (224)
T ss_pred             EEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence            899999878999999999999999753

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.52  E-value=7.8e-15  Score=131.97  Aligned_cols=95  Identities=12%  Similarity=0.011  Sum_probs=77.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...++..+|+.+ +.+....+||+|.+|+.+++++++    ++
T Consensus        83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~---~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  159 (214)
T PRK13288         83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEM---GLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL  159 (214)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence            3578899999998899985 789976543322   24444577888875 777778899999999999999997    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++ .||++|+++|++++++..
T Consensus       160 ~iGDs~-~Di~aa~~aG~~~i~v~~  183 (214)
T PRK13288        160 MVGDNH-HDILAGKNAGTKTAGVAW  183 (214)
T ss_pred             EECCCH-HHHHHHHHCCCeEEEEcC
Confidence            999996 899999999999999853

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.51  E-value=2.3e-14  Score=129.69  Aligned_cols=97  Identities=18%  Similarity=0.157  Sum_probs=79.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.++++|.++ |+||........   .+...++..+|+.+ +++....+||+|++|+.+++++|+    .+
T Consensus        93 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         93 LLPGVREALALCKAQGLKIGLASASPLHMLEA---VLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHH---HHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4688999999998999985 888866543332   24445677888875 667777899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||||++ .|+++|+++|+++|+++.-.
T Consensus       170 ~igDs~-~Di~aA~~aG~~~i~v~~~~  195 (222)
T PRK10826        170 ALEDSF-NGMIAAKAARMRSIVVPAPE  195 (222)
T ss_pred             EEcCCh-hhHHHHHHcCCEEEEecCCc
Confidence            999996 79999999999999997653

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.51  E-value=5.1e-13  Score=113.82  Aligned_cols=44  Identities=14%  Similarity=0.060  Sum_probs=41.0

Q ss_pred             cCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          224 MGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       224 ~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+||+|.+|+.+++++++    .+||||+ ..||++|+++|++++|+++
T Consensus        99 ~~KP~~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~  146 (147)
T TIGR01656        99 CRKPKPGLILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVD  146 (147)
T ss_pred             CCCCCHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecC
Confidence            359999999999999998    6999999 7899999999999999986

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.50  E-value=2e-14  Score=133.96  Aligned_cols=95  Identities=8%  Similarity=0.047  Sum_probs=72.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHh-cCcccccCCCCHHHHHHHHHHhCC-----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKL-GGEVRWMGKPDKLWATLFTMILRV-----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~-g~e~~~~GKP~p~if~~Al~~lg~-----  241 (332)
                      .|+++.++++.|+++|+++ |+||........   .+....+..++ +.+ +++....+||+|++|..+++++|+     
T Consensus       102 ~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~---~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e  178 (267)
T PRK13478        102 PIPGVLEVIAALRARGIKIGSTTGYTREMMDV---VVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAA  178 (267)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHH---HHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            3678999999998999985 888876643221   12221233332 443 667777889999999999999996     


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ++||||++ +||++|+++|+++|++..
T Consensus       179 ~l~IGDs~-~Di~aA~~aG~~~i~v~~  204 (267)
T PRK13478        179 CVKVDDTV-PGIEEGLNAGMWTVGVIL  204 (267)
T ss_pred             eEEEcCcH-HHHHHHHHCCCEEEEEcc
Confidence            48999996 899999999999999964

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.50  E-value=2.9e-14  Score=128.72  Aligned_cols=100  Identities=16%  Similarity=0.083  Sum_probs=80.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.+.++.+..+ .++ +.||........   .+...++..+|+.+ .++.....||+|.+|+.+++++|+    .+
T Consensus       100 ~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~---~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l  175 (229)
T COG1011         100 DYPEALEALKELGKK-YKLGILTNGARPHQER---KLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL  175 (229)
T ss_pred             cChhHHHHHHHHHhh-ccEEEEeCCChHHHHH---HHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence            357778888877666 664 889975543332   23333499999995 778788999999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchhhH
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQIYL  273 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~~~  273 (332)
                      ||||++.+||.||+++||++||+++...+.
T Consensus       176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~  205 (229)
T COG1011         176 FVGDSLENDILGARALGMKTVWINRGGKPL  205 (229)
T ss_pred             EECCChhhhhHHHHhcCcEEEEECCCCCCC
Confidence            999999999999999999999999887654

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.50  E-value=1.5e-14  Score=127.14  Aligned_cols=89  Identities=13%  Similarity=0.097  Sum_probs=70.3

Q ss_pred             HHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCC
Q 019991          175 EKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESS  248 (332)
Q Consensus       175 ~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs  248 (332)
                      .+.++.+.++ .++ |+||........   .+...++..+|+.+ +++....+||+|++|+.+++++|+    ++||||+
T Consensus        93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs  168 (188)
T PRK10725         93 IEVVKAWHGR-RPMAVGTGSESAIAEA---LLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDA  168 (188)
T ss_pred             HHHHHHHHhC-CCEEEEcCCchHHHHH---HHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence            3667666544 564 888876544332   24555688888885 777777899999999999999998    6999999


Q ss_pred             hhhHHHHHHHcCCcEEEEec
Q 019991          249 PYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       249 ~~~DI~gA~~aG~~ti~~~~  268 (332)
                       ..|+++|+++|+++|.+.+
T Consensus       169 -~~di~aA~~aG~~~i~~~~  187 (188)
T PRK10725        169 -DFGIQAARAAGMDAVDVRL  187 (188)
T ss_pred             -HhhHHHHHHCCCEEEeecC
Confidence             5899999999999999865

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.49  E-value=6.4e-14  Score=125.64  Aligned_cols=99  Identities=16%  Similarity=0.152  Sum_probs=76.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|+++ |+||......... .......+..+|+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus        95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~-~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l  173 (211)
T TIGR02247        95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAE-EALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV  173 (211)
T ss_pred             cChhHHHHHHHHHHCCCeEEEEeCCCCccchhh-hHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4688999999998899885 7898654321111 012234567778775 666677799999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||||+ ..||++|+++||++|++....
T Consensus       174 ~i~D~-~~di~aA~~aG~~~i~v~~~~  199 (211)
T TIGR02247       174 FLDDL-GSNLKPAAALGITTIKVSDEE  199 (211)
T ss_pred             EEcCC-HHHHHHHHHcCCEEEEECCHH
Confidence            99999 589999999999999997543

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02940 riboflavin kinase

Probab=99.48  E-value=9.5e-14  Score=136.18  Aligned_cols=95  Identities=18%  Similarity=0.253  Sum_probs=77.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecC-CChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVM-PGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~-~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .|+++.++++.|+++|.++ |+||........   .+. ...+..+|+.+ +++....+||+|.+|..+++++|+    .
T Consensus        94 l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~---~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~  170 (382)
T PLN02940         94 ALPGANRLIKHLKSHGVPMALASNSPRANIEA---KISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC  170 (382)
T ss_pred             CCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHH---HHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence            3578899999999999985 889976553321   232 44577788885 777777899999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +||||++ .||++|+++||++|++..
T Consensus       171 l~VGDs~-~Di~aA~~aGi~~I~v~~  195 (382)
T PLN02940        171 LVIEDSL-PGVMAGKAAGMEVIAVPS  195 (382)
T ss_pred             EEEeCCH-HHHHHHHHcCCEEEEECC
Confidence            9999996 799999999999999964

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.48  E-value=1e-13  Score=124.65  Aligned_cols=94  Identities=20%  Similarity=0.162  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHhCCCc-EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHh-CC----eE
Q 019991          171 LQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMIL-RV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~l-g~----~l  243 (332)
                      ++++.++++.++++ .+ .++||........   .+...++..+|+.+ +++.....||+|.+|+.+++++ |+    .+
T Consensus        99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v  174 (224)
T TIGR02254        99 LPGAFELMENLQQK-FRLYIVTNGVRETQYK---RLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL  174 (224)
T ss_pred             CccHHHHHHHHHhc-CcEEEEeCCchHHHHH---HHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence            57889999988777 66 4889976543321   24445677888885 7777788899999999999999 87    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++..||++|+++||++||++.
T Consensus       175 ~igD~~~~di~~A~~~G~~~i~~~~  199 (224)
T TIGR02254       175 MIGDSLTADIKGGQNAGLDTCWMNP  199 (224)
T ss_pred             EECCCcHHHHHHHHHCCCcEEEECC
Confidence            9999976899999999999999975

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.48  E-value=2.1e-13  Score=119.18  Aligned_cols=91  Identities=14%  Similarity=0.094  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||+... .    ..+...++..+|+.+ +++....+||+|++|+.+++++++    .+
T Consensus        88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~~-~----~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v  162 (185)
T TIGR01990        88 VLPGIKNLLDDLKKNNIKIALASASKNA-P----TVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI  162 (185)
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCccH-H----HHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            3688999999998899986 77875431 1    124444677788874 666677899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEE
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ||||++ .|+++|+++||++|.+
T Consensus       163 ~vgD~~-~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       163 GIEDAQ-AGIEAIKAAGMFAVGV  184 (185)
T ss_pred             EEecCH-HHHHHHHHcCCEEEec
Confidence            999995 8999999999999986

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.46  E-value=5.7e-14  Score=122.82  Aligned_cols=91  Identities=15%  Similarity=0.143  Sum_probs=73.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|.++|.++ ++||. .. ..   ..+...++..+|+.+ +++....+||+|.+|+.+++++++    .+
T Consensus        89 ~~~g~~~~l~~l~~~g~~i~i~S~~-~~-~~---~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        89 VLPGIENFLKRLKKKGIAVGLGSSS-KN-AD---RILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCcCHHHHHHHHHHcCCeEEEEeCc-hh-HH---HHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            4688999999998889986 77876 21 11   124455677888875 666677899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEE
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ||||+ ..|+++|+++|+++|.+
T Consensus       164 ~IgD~-~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       164 VFEDA-LAGVQAARAAGMFAVAV  185 (185)
T ss_pred             EEeCc-HhhHHHHHHCCCeEeeC
Confidence            99999 58999999999999874

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.46  E-value=6.4e-14  Score=125.32  Aligned_cols=94  Identities=18%  Similarity=0.113  Sum_probs=76.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||........   .+...++..+|+.+ +++....+||+|++|..+++++|+    .+
T Consensus        86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  162 (213)
T TIGR01449        86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARP---LLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV  162 (213)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            3678899999998899885 889876644332   23444577777774 777777899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||+ ..|+++|+++|++++++.
T Consensus       163 ~igDs-~~d~~aa~~aG~~~i~v~  185 (213)
T TIGR01449       163 YVGDS-RVDIQAARAAGCPSVLLT  185 (213)
T ss_pred             EeCCC-HHHHHHHHHCCCeEEEEc
Confidence            99999 589999999999999994

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.46  E-value=4.7e-14  Score=128.07  Aligned_cols=97  Identities=15%  Similarity=0.107  Sum_probs=80.8

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCCe----
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQ----  242 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~----  242 (332)
                      ..|+++.++++.|..+|+++ |+||+.......   .+...++..+|+.+ |.+.....||+|..+..+++++|+.    
T Consensus        89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~---~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~  165 (220)
T COG0546          89 RLFPGVKELLAALKSAGYKLGIVTNKPERELDI---LLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEA  165 (220)
T ss_pred             ccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHH---HHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhhe
Confidence            35688999999999999985 899977765443   35556788889885 7677888999999999999999984    


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +||||+ ..||++|++||++++.+.--
T Consensus       166 l~VGDs-~~Di~aA~~Ag~~~v~v~~g  191 (220)
T COG0546         166 LMVGDS-LNDILAAKAAGVPAVGVTWG  191 (220)
T ss_pred             EEECCC-HHHHHHHHHcCCCEEEEECC
Confidence            999999 58999999999999988653

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.45  E-value=1.2e-12  Score=108.90  Aligned_cols=45  Identities=9%  Similarity=0.063  Sum_probs=40.2

Q ss_pred             cCCCCHHHHHHHHHHh-CC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          224 MGKPDKLWATLFTMIL-RV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       224 ~GKP~p~if~~Al~~l-g~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ..||+|++|+.+++++ ++    .+||||+...||++|+++|+++||++.
T Consensus        83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence            3599999999999999 47    699999657999999999999999974

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.45  E-value=1.2e-13  Score=125.75  Aligned_cols=92  Identities=12%  Similarity=0.119  Sum_probs=74.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||........   .+...++..+|+.+ +++....+||+|++|+.+++++|+    .+
T Consensus        94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~---~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         94 LREDTVPFLEALKASGKRRILLTNAHPHNLAV---KLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             cCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHH---HHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            3678999999999999985 889965543322   24445688888875 667777899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEE
Q 019991          244 QLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      ||||++ .|+++|+++||++++
T Consensus       171 ~igDs~-~di~aA~~aG~~~~~  191 (224)
T PRK14988        171 FIDDSE-PILDAAAQFGIRYCL  191 (224)
T ss_pred             EEcCCH-HHHHHHHHcCCeEEE
Confidence            999996 799999999999754

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.45  E-value=1.1e-13  Score=124.85  Aligned_cols=90  Identities=17%  Similarity=0.184  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-h-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      |+++.++++.|   +.++ |+||.+......   .+..-++..+|+. + +++....+||+|++|+.+++++|+    ++
T Consensus        90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~---~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l  163 (221)
T PRK10563         90 IAGANALLESI---TVPMCVVSNGPVSKMQH---SLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI  163 (221)
T ss_pred             CCCHHHHHHHc---CCCEEEEeCCcHHHHHH---HHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            46788888876   3664 889976543332   2445567888853 3 555667889999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||++ .||++|+++|++++++.
T Consensus       164 ~igDs~-~di~aA~~aG~~~i~~~  186 (221)
T PRK10563        164 LVDDSS-AGAQSGIAAGMEVFYFC  186 (221)
T ss_pred             EEeCcH-hhHHHHHHCCCEEEEEC
Confidence            999996 79999999999999984

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.43  E-value=1.1e-13  Score=123.66  Aligned_cols=94  Identities=10%  Similarity=0.040  Sum_probs=75.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||........   .+..-++..+|+.+ +.+....+||+|.+|..+++++|+    ++
T Consensus        76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l  152 (205)
T TIGR01454        76 VFPGVPELLAELRADGVGTAIATGKSGPRARS---LLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV  152 (205)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHH---HHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence            3578899999998899885 889976554332   23444567777774 666667799999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||++ .|+++|+++|++++++.
T Consensus       153 ~igD~~-~Di~aA~~~Gi~~i~~~  175 (205)
T TIGR01454       153 MVGDAV-TDLASARAAGTATVAAL  175 (205)
T ss_pred             EEcCCH-HHHHHHHHcCCeEEEEE
Confidence            999995 89999999999999874

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.43  E-value=1.4e-13  Score=128.97  Aligned_cols=94  Identities=14%  Similarity=0.131  Sum_probs=73.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+++|.++ |+||........   .+..-.+..+|+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus       102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~---~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        102 VYPGVRDTLKWLKKQGVEMALITNKPERFVAP---LLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCcHHHHHH---HHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            4688999999988889885 788865532221   12233466677764 666666789999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||+ ..||++|+++|++++++.
T Consensus       179 ~IGD~-~~Di~aA~~aGi~~i~v~  201 (272)
T PRK13223        179 FVGDS-RSDVLAAKAAGVQCVALS  201 (272)
T ss_pred             EECCC-HHHHHHHHHCCCeEEEEe
Confidence            99999 589999999999999984

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.41  E-value=1.3e-12  Score=123.32  Aligned_cols=95  Identities=17%  Similarity=0.110  Sum_probs=70.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCC---hhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG---TLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G---~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      .|+++.++++.|+++|+++ |+||........   .+...   .+...+..++++....+||+|++|..+++++|+    
T Consensus       145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~---~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSK---IVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            4689999999999999986 889975543321   11111   111222223455566789999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+||||++ .||++|+++||++|.+.-
T Consensus       222 ~l~IGDs~-~Di~aA~~aG~~~i~v~~  247 (286)
T PLN02779        222 CVVVEDSV-IGLQAAKAAGMRCIVTKS  247 (286)
T ss_pred             EEEEeCCH-HhHHHHHHcCCEEEEEcc
Confidence            69999996 799999999999999943

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.40  E-value=2.9e-12  Score=116.93  Aligned_cols=94  Identities=17%  Similarity=0.153  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      ++++++++.++.+|..+ +.||-|.....    .+..-.+..+|+.+ -+.....-||+|.||+.|++++++    .++|
T Consensus       116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~~----~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI  191 (237)
T KOG3085|consen  116 DGMQELLQKLRKKGTILGIISNFDDRLRL----LLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI  191 (237)
T ss_pred             cHHHHHHHHHHhCCeEEEEecCCcHHHHH----HhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence            66779999998999654 77998877653    24445677889885 555677889999999999999998    6999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecc
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||++.+|++||+++||++++++..
T Consensus       192 gD~l~nD~~gA~~~G~~ailv~~~  215 (237)
T KOG3085|consen  192 GDLLENDYEGARNLGWHAILVDNS  215 (237)
T ss_pred             cCccccccHhHHHcCCEEEEEccc
Confidence            999999999999999999999643

>PRK06769 hypothetical protein; Validated

Probab=99.40  E-value=4.9e-12  Score=110.80  Aligned_cols=45  Identities=7%  Similarity=-0.081  Sum_probs=41.2

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ...||+|.+|..+++++++    ++||||++ +||++|+++|+++|++..
T Consensus        90 ~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~  138 (173)
T PRK06769         90 ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRT  138 (173)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEec
Confidence            4469999999999999997    69999996 899999999999999964

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.39  E-value=4.4e-13  Score=120.86  Aligned_cols=94  Identities=17%  Similarity=0.115  Sum_probs=73.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.++++|.++ ++||........   .+...++..+|+.+ +.+....+||+|.+|+.+++++++    .+
T Consensus        94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  170 (226)
T PRK13222         94 LYPGVKETLAALKAAGYPLAVVTNKPTPFVAP---LLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML  170 (226)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence            3578899999988889875 888876543321   12233455556654 666667899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      +|||+. .|+++|+++|++++++.
T Consensus       171 ~igD~~-~Di~~a~~~g~~~i~v~  193 (226)
T PRK13222        171 FVGDSR-NDIQAARAAGCPSVGVT  193 (226)
T ss_pred             EECCCH-HHHHHHHHCCCcEEEEC
Confidence            999995 89999999999999996

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.39  E-value=2.1e-13  Score=119.75  Aligned_cols=91  Identities=11%  Similarity=0.055  Sum_probs=70.1

Q ss_pred             CHHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCccccc----CCCCHHHHHHHHHHhCC---
Q 019991          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWM----GKPDKLWATLFTMILRV---  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~----GKP~p~if~~Al~~lg~---  241 (332)
                      .++++.++++.|.  +...|+||........   .+..-++..+|+.+ +++....    .||+|.+|+.+++++|+   
T Consensus        85 ~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~---~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        85 PDPELRNLLLRLP--GRKIIFTNGDRAHARR---ALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCHHHHHHHHhCC--CCEEEEeCCCHHHHHH---HHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            4688999998764  3346889987654332   23444577788875 5555554    59999999999999998   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                       .+||||++ .||++|+++|+++|++
T Consensus       160 ~~l~vgD~~-~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       160 RAIFFDDSA-RNIAAAKALGMKTVLV  184 (184)
T ss_pred             ceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence             58999995 7999999999999985

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.35  E-value=1.2e-11  Score=100.87  Aligned_cols=126  Identities=27%  Similarity=0.276  Sum_probs=91.9

Q ss_pred             EEEEeccceeecCC---------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH
Q 019991           32 AWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        32 ~vlfDlDGvL~~g~---------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~  102 (332)
                      +++||+||||+...         .++||+.++|+.|+++|++++++||+.+  +.+...++.+|+... ++.++++....
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~--~~~~~~~~~~~~~~~-~~~i~~~~~~~   77 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSR--REVLELLEELGLDDY-FDPVITSNGAA   77 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchH--HHHHHHHHHcCCchh-hhheeccchhh
Confidence            47999999999998         8899999999999999999999999763  334555666666433 22222211000


Q ss_pred             HHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 019991          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (332)
Q Consensus       103 ~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~  182 (332)
                      ..                                     ..  ..      .         +..                
T Consensus        78 ~~-------------------------------------~~--~~------~---------~~~----------------   87 (139)
T cd01427          78 IY-------------------------------------YP--KE------G---------LFL----------------   87 (139)
T ss_pred             hh-------------------------------------cc--cc------c---------ccc----------------
Confidence            00                                     00  00      0         000                


Q ss_pred             hCCCcEEEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHH
Q 019991          183 SKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQ  258 (332)
Q Consensus       183 ~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~  258 (332)
                                                         +......|||++..+..+.+.++.    .++|||+. +|++.|++
T Consensus        88 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~  131 (139)
T cd01427          88 -----------------------------------GGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKA  131 (139)
T ss_pred             -----------------------------------cccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHH
Confidence                                               456678899999999999999887    68999995 89999999


Q ss_pred             cCCcEEEE
Q 019991          259 LNLDLTVM  266 (332)
Q Consensus       259 aG~~ti~~  266 (332)
                      +|+.++++
T Consensus       132 ~g~~~i~v  139 (139)
T cd01427         132 AGGLGVAV  139 (139)
T ss_pred             cCCceeeC
Confidence            99999985

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.35  E-value=1.3e-11  Score=107.62  Aligned_cols=46  Identities=28%  Similarity=0.354  Sum_probs=40.0

Q ss_pred             cCccEEEEeccceeecCCc-------------cCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-------------PYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-------------~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      |..+.++||+||||+....             ++||+.++|+.|+++|++++++||++.
T Consensus        11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~   69 (166)
T TIGR01664        11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG   69 (166)
T ss_pred             CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            3568999999999998532             579999999999999999999999754

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.34  E-value=3.2e-11  Score=105.67  Aligned_cols=46  Identities=7%  Similarity=-0.006  Sum_probs=40.9

Q ss_pred             cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE-EEEec
Q 019991          222 RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL-TVMEK  268 (332)
Q Consensus       222 ~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t-i~~~~  268 (332)
                      ...+||+|.+|..+++++|+    .+||||++ +||++|+++|+++ +++..
T Consensus       102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~  152 (176)
T TIGR00213       102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRT  152 (176)
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEec
Confidence            34589999999999999998    69999995 8999999999998 68764

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.30  E-value=2.1e-12  Score=121.23  Aligned_cols=92  Identities=13%  Similarity=0.098  Sum_probs=70.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|.++|+++ |+||........   .+...++..+|+.+ +.++.   +|.|+.|..+++++++    .+
T Consensus       143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~---~L~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~~~l  216 (273)
T PRK13225        143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEA---FLQRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQPAAVM  216 (273)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcChhHEE
Confidence            4688999999998899986 889876654332   23444566777664 43332   3557899999999987    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++ .||++|+++||++|++..
T Consensus       217 ~IGDs~-~Di~aA~~AG~~~I~v~~  240 (273)
T PRK13225        217 YVGDET-RDVEAARQVGLIAVAVTW  240 (273)
T ss_pred             EECCCH-HHHHHHHHCCCeEEEEec
Confidence            999995 799999999999999853

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.30  E-value=3.3e-12  Score=139.41  Aligned_cols=96  Identities=16%  Similarity=0.202  Sum_probs=77.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChh-HHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i-~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .|+++.++++.|+++|.++ |+||.+.......   +..-++ ..+|+.+ +.+....+||+|++|+.+++++|+    .
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~---L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~  238 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDAN---LAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSEC  238 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccE
Confidence            4688999999999999985 8899877644321   333345 3567775 777778899999999999999998    5


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +||||++ .||++|+++||++|++..-
T Consensus       239 v~IgDs~-~Di~AA~~aGm~~I~v~~~  264 (1057)
T PLN02919        239 VVIEDAL-AGVQAARAAGMRCIAVTTT  264 (1057)
T ss_pred             EEEcCCH-HHHHHHHHcCCEEEEECCC
Confidence            9999995 7999999999999999754

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.29  E-value=3.3e-11  Score=105.92  Aligned_cols=45  Identities=11%  Similarity=0.011  Sum_probs=40.5

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ..+||+|.+|+.+++++|+    .+||||++ .||++|+++|+.++++..
T Consensus       100 ~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~  148 (181)
T PRK08942        100 DCRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRT  148 (181)
T ss_pred             cCCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcC
Confidence            4579999999999999998    69999995 799999999999998853

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.28  E-value=5.6e-12  Score=111.89  Aligned_cols=97  Identities=15%  Similarity=0.165  Sum_probs=79.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.|+++|.++ |+||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus        93 ~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~---~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~  169 (198)
T TIGR01428        93 PHPDVPAGLRALKERGYRLAILSNGSPAMLKS---LVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL  169 (198)
T ss_pred             CCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            3578899999998889985 889987654332   23334577888875 777778899999999999999998    58


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||||++ .|+++|+++||++||+++..
T Consensus       170 ~vgD~~-~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       170 FVASNP-WDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             EEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence            999997 89999999999999998754

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.21  E-value=7.2e-12  Score=125.69  Aligned_cols=94  Identities=9%  Similarity=-0.077  Sum_probs=75.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQL  245 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmI  245 (332)
                      .|+++.+++++|+++|.++ |+||........   .+...++..+|+.+ +.+.. .+||+|++|..++++++.  .+||
T Consensus       331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~---~l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l~~~~~v~V  406 (459)
T PRK06698        331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRA---IVSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKYDIKEAAVV  406 (459)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHH---HHHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhcCcceEEEE
Confidence            4688999999998899986 899987765443   24555678888885 55543 357888999999999887  7999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEec
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||++ .||++|+++||.+|++..
T Consensus       407 GDs~-~Di~aAk~AG~~~I~v~~  428 (459)
T PRK06698        407 GDRL-SDINAAKDNGLIAIGCNF  428 (459)
T ss_pred             eCCH-HHHHHHHHCCCeEEEEeC
Confidence            9996 899999999999999964

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.21  E-value=1.5e-11  Score=104.59  Aligned_cols=83  Identities=13%  Similarity=0.170  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC---eEEEe
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV---QMQLE  246 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~---~lmIG  246 (332)
                      +++.++++.|.++|.++ |+||.+.......   +... +..+|+.+ +.+... +||+|.+|..+++++|+   .+|||
T Consensus        67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~---~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~~~l~iG  141 (154)
T TIGR01549        67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLL---LRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPPEVLHVG  141 (154)
T ss_pred             cCHHHHHHHHHHCcCeEEEEeCCchHHHHHH---HHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCCCEEEEe
Confidence            56889999888889885 8899876543321   2222 55566654 666566 99999999999999998   59999


Q ss_pred             CChhhHHHHHHHcC
Q 019991          247 SSPYSLLEGSMQLN  260 (332)
Q Consensus       247 Ds~~~DI~gA~~aG  260 (332)
                      |+ ..|+++|+++|
T Consensus       142 Ds-~~Di~aa~~aG  154 (154)
T TIGR01549       142 DN-LNDIEGARNAG  154 (154)
T ss_pred             CC-HHHHHHHHHcc
Confidence            99 68999999997

HAD subfamilies caused by an overly broad single model.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.21  E-value=3e-11  Score=107.37  Aligned_cols=81  Identities=15%  Similarity=-0.049  Sum_probs=62.8

Q ss_pred             HHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeC
Q 019991          174 LEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLES  247 (332)
Q Consensus       174 l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGD  247 (332)
                      ..++++.|+++|.++ |+||.+......   .+..-++..+|+.+ +.+.... ||+|.+|..+++++|+    ++||||
T Consensus       111 ~~~~L~~l~~~g~~~~i~T~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD  186 (197)
T TIGR01548       111 PKGLLRELHRAPKGMAVVTGRPRKDAAK---FLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGD  186 (197)
T ss_pred             HHHHHHHHHHcCCcEEEECCCCHHHHHH---HHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence            478888888889985 889987654432   24444577888775 5555444 9999999999999998    599999


Q ss_pred             ChhhHHHHHHHc
Q 019991          248 SPYSLLEGSMQL  259 (332)
Q Consensus       248 s~~~DI~gA~~a  259 (332)
                      ++ .||++|+++
T Consensus       187 ~~-~Di~aA~~a  197 (197)
T TIGR01548       187 TV-DDIITGRKA  197 (197)
T ss_pred             CH-HHHHHHHhC
Confidence            96 799999975

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PHA02597 30

Probab=99.20  E-value=1.4e-10  Score=102.95  Aligned_cols=95  Identities=8%  Similarity=-0.055  Sum_probs=66.8

Q ss_pred             CHHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHH----HHHHh-cCcccccCCCCHHHHHHHHHHhC--Ce
Q 019991          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLAS----KFEKL-GGEVRWMGKPDKLWATLFTMILR--VQ  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~----~~e~~-g~e~~~~GKP~p~if~~Al~~lg--~~  242 (332)
                      .|+++.++++.|++++..+++||+........   ...-++..    +|+.+ +.+.   .||+|++|..+++++|  ..
T Consensus        75 ~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~---~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~~~~~  148 (197)
T PHA02597         75 AYDDALDVINKLKEDYDFVAVTALGDSIDALL---NRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYGDRVV  148 (197)
T ss_pred             CCCCHHHHHHHHHhcCCEEEEeCCccchhHHH---HhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhCCCcE
Confidence            46889999999877654457788654322111   11222333    33332 3333   4788999999999999  57


Q ss_pred             EEEeCChhhHHHHHHHc--CCcEEEEecchh
Q 019991          243 MQLESSPYSLLEGSMQL--NLDLTVMEKLQI  271 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~a--G~~ti~~~~~~~  271 (332)
                      +||||+. .|+++|+++  ||++++++.-++
T Consensus       149 v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        149 CFVDDLA-HNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             EEeCCCH-HHHHHHHHHHcCCcEEEecchhh
Confidence            8999995 799999999  999999976654

2 hypothetical protein; Provisional

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.12  E-value=1.2e-10  Score=87.99  Aligned_cols=46  Identities=17%  Similarity=0.081  Sum_probs=42.9

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+|||+|.+|+.|++++++    .+||||++.+||++|+++|++++++..
T Consensus         1 ~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t   50 (75)
T PF13242_consen    1 VCGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLT   50 (75)
T ss_dssp             SCSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred             CCCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence            4799999999999999998    699999999999999999999999954

...

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.12  E-value=1.5e-10  Score=103.12  Aligned_cols=94  Identities=9%  Similarity=0.049  Sum_probs=75.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceec-CCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV-MPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l-~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      |+++.++++.++++|.++ |+||........   .+ ....+..+|+.+ +++....+||+|++|+.+++++|+    ++
T Consensus        86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~---~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  162 (199)
T PRK09456         86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTF---WPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV  162 (199)
T ss_pred             CHHHHHHHHHHHhCCCcEEEEcCCchhhHHH---HHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence            689999999998899885 889976542211   01 122466778775 777788899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||++ .||++|+++||+++++..
T Consensus       163 ~vgD~~-~di~aA~~aG~~~i~~~~  186 (199)
T PRK09456        163 FFDDNA-DNIEAANALGITSILVTD  186 (199)
T ss_pred             EeCCCH-HHHHHHHHcCCEEEEecC
Confidence            999995 799999999999999965

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.08  E-value=2.2e-10  Score=104.08  Aligned_cols=94  Identities=17%  Similarity=0.204  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh--c-CcccccCCCCHHHHHHHHHHhCC-----e
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--G-GEVRWMGKPDKLWATLFTMILRV-----Q  242 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g-~e~~~~GKP~p~if~~Al~~lg~-----~  242 (332)
                      ++++++++.|..+|+|+ ++||.++......  .=..+.+...|...  | ......|||+|++|..|++++|.     .
T Consensus        95 PGa~kLv~~L~~~gip~alat~s~~~~~~~k--~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~  172 (222)
T KOG2914|consen   95 PGAEKLVNHLKNNGIPVALATSSTSASFELK--ISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKC  172 (222)
T ss_pred             CcHHHHHHHHHhCCCCeeEEecCCcccHHHH--HHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccce
Confidence            68899999999999997 8888755432211  11234466666662  3 34478899999999999999997     4


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ++++|++ ..+++|++|||+.|++..
T Consensus       173 lVfeds~-~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  173 LVFEDSP-VGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             EEECCCH-HHHHHHHhcCCeEEEecC
Confidence            8999996 679999999999999976

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.07  E-value=3.3e-09  Score=102.86  Aligned_cols=46  Identities=4%  Similarity=-0.066  Sum_probs=41.4

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ..+||+|.++..+++++++    .+||||+ .+|+++|+++||++||++..
T Consensus       101 ~~rKP~p~~l~~a~~~l~v~~~~svmIGDs-~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446        101 SCRKPKTGLVEEYLAEGAIDLANSYVIGDR-ETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEECC
Confidence            3579999999999999876    6999999 58999999999999999663

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.05  E-value=1.6e-10  Score=98.63  Aligned_cols=92  Identities=20%  Similarity=0.200  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.|.++|.++ ++||.+......   .+...++..+|+.+ +++.....||+|.+|+.+++++|+    .++
T Consensus        79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~---~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~  155 (176)
T PF13419_consen   79 YPGVRELLERLKAKGIPLVIVSNGSRERIER---VLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF  155 (176)
T ss_dssp             STTHHHHHHHHHHTTSEEEEEESSEHHHHHH---HHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred             hhhhhhhhhhcccccceeEEeecCCcccccc---cccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence            477899999988889986 789986543322   23334566677764 667777899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEE
Q 019991          245 LESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      |||++ .|+++|+++||++||+
T Consensus       156 vgD~~-~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  156 VGDSP-SDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EESSH-HHHHHHHHTTSEEEEE
T ss_pred             EeCCH-HHHHHHHHcCCeEEeC
Confidence            99997 8999999999999986

...

>PLN02811 hydrolase

Probab=99.01  E-value=5.8e-10  Score=100.98  Aligned_cols=96  Identities=17%  Similarity=0.240  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCc--ccccCCCCHHHHHHHHHHhC---C-
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGE--VRWMGKPDKLWATLFTMILR---V-  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e--~~~~GKP~p~if~~Al~~lg---~-  241 (332)
                      .|+++.++++.|+++|+++ |+||.........  ....+.+..+|+.+ +.+  ....+||+|++|..++++++   + 
T Consensus        79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~--~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLK--TQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHH--HcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence            3688999999999999986 8888765322111  12234566777764 555  56678999999999999996   5 


Q ss_pred             ---eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 ---QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ---~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                         .+||||++ .|+++|+++|+++|++..
T Consensus       157 ~~~~v~IgDs~-~di~aA~~aG~~~i~v~~  185 (220)
T PLN02811        157 PGKVLVFEDAP-SGVEAAKNAGMSVVMVPD  185 (220)
T ss_pred             ccceEEEeccH-hhHHHHHHCCCeEEEEeC
Confidence               69999995 799999999999999954

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.00  E-value=5.3e-10  Score=97.10  Aligned_cols=91  Identities=19%  Similarity=0.161  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.|+++|.++ ++||.+... . .  .....++..+|+.+ +++....+||+|.+|+.+++++|+    .+|
T Consensus        87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~-~--~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  162 (183)
T TIGR01509        87 LPGVEPLLEALRARGKKLALLTNSPRDH-A-V--LVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF  162 (183)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCchHH-H-H--HHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence            578899999988889885 889987754 2 1  12224567778874 666677899999999999999987    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEE
Q 019991          245 LESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      |||++ .||++|+++|+++|++
T Consensus       163 vgD~~-~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       163 VDDSP-AGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EcCCH-HHHHHHHHcCCEEEeC
Confidence            99996 7999999999999975

HAD subfamilies caused by an overly broad single model.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.98  E-value=2.1e-09  Score=98.84  Aligned_cols=94  Identities=4%  Similarity=-0.028  Sum_probs=65.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceec-cceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCCeEEEe
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEA-RALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQMQLE  246 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~-~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~lmIG  246 (332)
                      .++.+.++++.+.++|.++ |+||++..-+.. -...+...++..+|..+ +++.....||+|.   .++++.++.+|||
T Consensus       115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i~i~vG  191 (237)
T TIGR01672       115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNIRIHYG  191 (237)
T ss_pred             chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCCeEEEe
Confidence            3466888999998999985 889974321100 00012233455566654 6665556788875   3667888899999


Q ss_pred             CChhhHHHHHHHcCCcEEEEe
Q 019991          247 SSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       247 Ds~~~DI~gA~~aG~~ti~~~  267 (332)
                      |+. .||.+|+++|+++|.+.
T Consensus       192 Ds~-~DI~aAk~AGi~~I~V~  211 (237)
T TIGR01672       192 DSD-NDITAAKEAGARGIRIL  211 (237)
T ss_pred             CCH-HHHHHHHHCCCCEEEEE
Confidence            995 89999999999999873

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.96  E-value=3.9e-09  Score=92.19  Aligned_cols=88  Identities=14%  Similarity=0.030  Sum_probs=67.5

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHhcCcc-cccCCCCHHHHHHHHHHhCC----
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKLGGEV-RWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~g~e~-~~~GKP~p~if~~Al~~lg~----  241 (332)
                      ..|+++.++++.|+++|.++ |+||.+..            .....+ +..+... ...+||+|.+|..+++++++    
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~------------~~~~~~~~~~gl~~~~~~~KP~p~~~~~~l~~~~~~~~~  110 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGE------------QRAKAVEKALGIPVLPHAVKPPGCAFRRAHPEMGLTSEQ  110 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchH------------HHHHHHHHHcCCEEEcCCCCCChHHHHHHHHHcCCCHHH
Confidence            45789999999999999885 88997521            011111 2233222 23479999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+||||++.+||++|+++|+++||++.
T Consensus       111 ~l~IGDs~~~Di~aA~~aGi~~i~v~~  137 (170)
T TIGR01668       111 VAVVGDRLFTDVMGGNRNGSYTILVEP  137 (170)
T ss_pred             EEEECCcchHHHHHHHHcCCeEEEEcc
Confidence            699999987899999999999999953

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.88  E-value=2.6e-09  Score=92.65  Aligned_cols=100  Identities=10%  Similarity=-0.024  Sum_probs=69.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccc--eecCCC-hhHHH-------HHH-h-c----CcccccCCCCHHHH
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARA--LRVMPG-TLASK-------FEK-L-G----GEVRWMGKPDKLWA  232 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~--~~l~~G-~i~~~-------~e~-~-g----~e~~~~GKP~p~if  232 (332)
                      .|+++.++++.|+++|.++ |+||.+........  ....+. .+.+.       |+. + +    .+.....||+|.+|
T Consensus        30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~~  109 (161)
T TIGR01261        30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKLL  109 (161)
T ss_pred             ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHHH
Confidence            3688999999999999985 88997532111000  000000 12222       332 1 2    34455679999999


Q ss_pred             HHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          233 TLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       233 ~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      +.+++++++    .+||||+ .+|+++|+++|+++++++.-+
T Consensus       110 ~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~  150 (161)
T TIGR01261       110 EPYLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEE  150 (161)
T ss_pred             HHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhh
Confidence            999999997    6899999 689999999999999996543

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.87  E-value=5.2e-09  Score=95.32  Aligned_cols=100  Identities=12%  Similarity=-0.001  Sum_probs=73.4

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      -.|+++.++++.|+++|.++ |+||.+.......-.....+.+..+|+..- +...-+||+|.+|..+++++|+    .+
T Consensus        95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~f-d~~~g~KP~p~~y~~i~~~lgv~p~e~l  173 (220)
T TIGR01691        95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYF-DTTVGLKTEAQSYVKIAGQLGSPPREIL  173 (220)
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEE-EeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence            45789999999999999985 889976543221100112245555555421 1123369999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||||+ ..|+++|+++||+++++.+-.
T Consensus       174 fVgDs-~~Di~AA~~AG~~ti~v~r~g  199 (220)
T TIGR01691       174 FLSDI-INELDAARKAGLHTGQLVRPG  199 (220)
T ss_pred             EEeCC-HHHHHHHHHcCCEEEEEECCC
Confidence            99999 589999999999999997643

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=98.78  E-value=1.9e-07  Score=82.14  Aligned_cols=49  Identities=6%  Similarity=-0.152  Sum_probs=42.1

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecchhh
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQIY  272 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~~  272 (332)
                      ...||+|.|++.+++++++    .+||||++ +|+++|.++|++++.+.....+
T Consensus       102 ~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~  154 (181)
T COG0241         102 DCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGV  154 (181)
T ss_pred             cccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCccc
Confidence            4569999999999999987    58999995 8999999999998887555443

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.77  E-value=4.2e-09  Score=94.79  Aligned_cols=95  Identities=11%  Similarity=0.000  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH--------h-c--CcccccCCCCHHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--------L-G--GEVRWMGKPDKLWATLFTMI  238 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~--------~-g--~e~~~~GKP~p~if~~Al~~  238 (332)
                      ++++.++++.++++|.++ |+||........-   ...-++...|..        . +  ......++|+|.+|+.++++
T Consensus        87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~---l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  163 (219)
T TIGR00338        87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHV---KDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK  163 (219)
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHH---HHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence            467888898888889885 7788654332211   111122222221        0 0  11123467899999999999


Q ss_pred             hCC----eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          239 LRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       239 lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      +++    +++|||+ .+|+.+|+++|+.. .++-.+
T Consensus       164 ~~~~~~~~i~iGDs-~~Di~aa~~ag~~i-~~~~~~  197 (219)
T TIGR00338       164 EGISPENTVAVGDG-ANDLSMIKAAGLGI-AFNAKP  197 (219)
T ss_pred             cCCCHHHEEEEECC-HHHHHHHHhCCCeE-EeCCCH
Confidence            987    6999999 58999999999975 455433

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=98.77  E-value=1.5e-08  Score=86.99  Aligned_cols=87  Identities=18%  Similarity=0.125  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc-cccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~-~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      +.+.+-+..++..|+++ |++|....-.         +.+++.   .|-.. ...+||.+.-|..|++.++.    ++||
T Consensus        49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV---------~~~~~~---l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV  116 (175)
T COG2179          49 PELRAWLAELKEAGIKVVVVSNNKESRV---------ARAAEK---LGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV  116 (175)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeCCCHHHH---------Hhhhhh---cCCceeecccCccHHHHHHHHHHcCCChhHEEEE
Confidence            67777787888899986 6777433211         112222   22232 24589999999999999998    6899


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecch
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ||++.|||.||+++||.||+++-..
T Consensus       117 GDqL~TDVlggnr~G~~tIlV~Pl~  141 (175)
T COG2179         117 GDQLFTDVLGGNRAGMRTILVEPLV  141 (175)
T ss_pred             cchhhhhhhcccccCcEEEEEEEec
Confidence            9999999999999999999986543

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.63  E-value=7.8e-08  Score=80.12  Aligned_cols=55  Identities=18%  Similarity=0.194  Sum_probs=43.5

Q ss_pred             cEEEEeccceeecCC-------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCC
Q 019991           31 KAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG   86 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~-------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lG   86 (332)
                      +.++||+|||||++.             .++||+.++|++|+++|++++++||++... .....++..|
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~-~~~~~l~~~~   68 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPH-VAYELLKIFE   68 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHH-HHHHHHHhcc
Confidence            478999999999993             269999999999999999999999984321 1234456666

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.60  E-value=6.5e-06  Score=76.31  Aligned_cols=60  Identities=18%  Similarity=0.289  Sum_probs=48.4

Q ss_pred             cCccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||++.. .+-|...++|++++++|++++++|..+  ...+...++.+|+..
T Consensus         1 M~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~--~~~~~~~~~~l~~~~   61 (272)
T PRK10530          1 MTYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRH--HVAIHPFYQALALDT   61 (272)
T ss_pred             CCccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHhcCCCC
Confidence            358899999999999876 478888999999999999999999754  333455667777653

>TIGR01684 viral_ppase viral phosphatase

Probab=98.60  E-value=5.8e-08  Score=91.16  Aligned_cols=73  Identities=19%  Similarity=0.300  Sum_probs=63.1

Q ss_pred             CccEEEEeccceeecCCcc----CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKP----YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~----ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      .++.++||+||||.+.+..    -||+.|+|++|+++|++++++||+++..  +.+.|+++|+... |+.|+++++....
T Consensus       125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~--v~~~L~~lGLd~Y-FdvIIs~Gdv~~~  201 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDH--VVESMRKVKLDRY-FDIIISGGHKAEE  201 (301)
T ss_pred             cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHHcCCCcc-cCEEEECCccccC
Confidence            5789999999999999875    3999999999999999999999987643  4578999999987 7889998887554

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.54  E-value=9e-08  Score=84.07  Aligned_cols=102  Identities=5%  Similarity=-0.066  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecC-Cccceecc--ceec-CCC---hhHHHHHHh-cCcccccCCCCHHHHHHHHHHh--
Q 019991          171 LQDLEKILEICASKKIPM-VVANP-DYVTVEAR--ALRV-MPG---TLASKFEKL-GGEVRWMGKPDKLWATLFTMIL--  239 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~-D~~~~~~~--~~~l-~~G---~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~l--  239 (332)
                      |+++.++++.|+++|.++ |+||. ........  ...+ ..|   .+..+|+.+ +.+.....||.+.+++.+.+.+  
T Consensus        47 ~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~  126 (174)
T TIGR01685        47 IKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPS  126 (174)
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccC
Confidence            588999999999999985 88987 33221110  0001 112   233677774 5544445678888888887766  


Q ss_pred             CC----eEEEeCChhhHHHHHHHcCCcEEEEecchhhH
Q 019991          240 RV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQIYL  273 (332)
Q Consensus       240 g~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~~~  273 (332)
                      |+    ++||||++ .|+++|+++|++++++......-
T Consensus       127 gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~~  163 (174)
T TIGR01685       127 VLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDKG  163 (174)
T ss_pred             CCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccHH
Confidence            45    69999995 79999999999999996654433

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PLN02954 phosphoserine phosphatase

Probab=98.53  E-value=6.2e-07  Score=80.90  Aligned_cols=92  Identities=9%  Similarity=-0.020  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH--HHHHH---------h-cC---cccccCCCCHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEK---------L-GG---EVRWMGKPDKLWATL  234 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~--~~~e~---------~-g~---e~~~~GKP~p~if~~  234 (332)
                      |+++.++++.++++|.++ |+||........-   +...++.  ..|..         + |.   ++...++|+|.++..
T Consensus        86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~---l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPV---AAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CccHHHHHHHHHHCCCEEEEECCCcHHHHHHH---HHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            477888998888889885 7787665433211   1111121  12210         1 11   112346778899999


Q ss_pred             HHHHhCC--eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          235 FTMILRV--QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       235 Al~~lg~--~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      +++++|.  .+||||++ +|+++|+++|++.+..
T Consensus       163 ~~~~~~~~~~i~iGDs~-~Di~aa~~~~~~~~~~  195 (224)
T PLN02954        163 IKKKHGYKTMVMIGDGA-TDLEARKPGGADLFIG  195 (224)
T ss_pred             HHHHcCCCceEEEeCCH-HHHHhhhcCCCCEEEe
Confidence            9998876  79999995 7999999999987654

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.51  E-value=2.5e-07  Score=87.42  Aligned_cols=96  Identities=13%  Similarity=0.078  Sum_probs=72.7

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHH-HHHHh-cCc-------ccccCCCCHHHHHHHHH
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLAS-KFEKL-GGE-------VRWMGKPDKLWATLFTM  237 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~-~~e~~-g~e-------~~~~GKP~p~if~~Al~  237 (332)
                      ...++++.++++.|.++|.++ ++||.+......   .+....+.. +|+.+ +.+       ....+||+|.++..+++
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~---~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~  262 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEED---TVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFW  262 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHH---HHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHH
Confidence            345899999999998999985 889987765432   122223332 55554 555       24468999999999999


Q ss_pred             HhCC-----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          238 ILRV-----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       238 ~lg~-----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      +++.     .+||||+ ..||++|+++|++++++.
T Consensus       263 ~~~~~~~~~~~~vgD~-~~d~~~a~~~Gi~~i~v~  296 (300)
T PHA02530        263 EKIAPKYDVLLAVDDR-DQVVDMWRRIGLECWQVA  296 (300)
T ss_pred             HHhccCceEEEEEcCc-HHHHHHHHHhCCeEEEec
Confidence            8765     5899999 589999999999999984

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.51  E-value=2.5e-07  Score=82.80  Aligned_cols=94  Identities=11%  Similarity=0.061  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cC---c---ccccCCCCHHHHHHHHHHhCC---
Q 019991          172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GG---E---VRWMGKPDKLWATLFTMILRV---  241 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~---e---~~~~GKP~p~if~~Al~~lg~---  241 (332)
                      ..+.+++-.+..++ +++.||.++.....   .+...++...|+.+ ..   .   ...+=||++..|+.|.+..|+   
T Consensus       103 ~~LRnlLL~l~~r~-k~~FTNa~k~HA~r---~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p  178 (244)
T KOG3109|consen  103 PVLRNLLLSLKKRR-KWIFTNAYKVHAIR---ILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSP  178 (244)
T ss_pred             HHHHHHHHhCcccc-EEEecCCcHHHHHH---HHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCc
Confidence            34555554443333 78999999986654   35555789999884 11   2   356779999999999999998   


Q ss_pred             --eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          242 --QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       242 --~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                        ++++-|| ..-|++|++.||+++++-+..
T Consensus       179 ~~t~FfDDS-~~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  179 RNTYFFDDS-ERNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             CceEEEcCc-hhhHHHHHhccceeEEEEeee
Confidence              5899999 578999999999999996655

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.45  E-value=2e-07  Score=87.72  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=63.6

Q ss_pred             CccEEEEeccceeecCCccC----cCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPY----PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~i----pGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      -++.++||+||||......+    ||+.++|++|+++|++++++||+++..  +...|+++|+... |+.+++++....+
T Consensus       127 ~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~--v~~~Le~lgL~~y-FDvII~~g~i~~k  203 (303)
T PHA03398        127 IPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREH--VVHSLKETKLEGY-FDIIICGGRKAGE  203 (303)
T ss_pred             eccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHH--HHHHHHHcCCCcc-ccEEEECCCcccc
Confidence            46799999999999998764    999999999999999999999987643  4568899999877 6888888887776


Q ss_pred             H
Q 019991          105 Y  105 (332)
Q Consensus       105 ~  105 (332)
                      +
T Consensus       204 ~  204 (303)
T PHA03398        204 Y  204 (303)
T ss_pred             c
Confidence            5

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=98.38  E-value=1.8e-07  Score=81.08  Aligned_cols=80  Identities=14%  Similarity=0.099  Sum_probs=61.5

Q ss_pred             CHHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      .|+++.++++.      ..|+||.+......   .+...++..+|+.+ +.+....+||+|++|+.+++++|+    .+|
T Consensus        91 ~~~g~~~~L~~------~~i~Tn~~~~~~~~---~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~  161 (175)
T TIGR01493        91 PWPDSAAALAR------VAILSNASHWAFDQ---FAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM  161 (175)
T ss_pred             CCCchHHHHHH------HhhhhCCCHHHHHH---HHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence            35667777762      34889987764432   24444688888885 677778899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHc
Q 019991          245 LESSPYSLLEGSMQL  259 (332)
Q Consensus       245 IGDs~~~DI~gA~~a  259 (332)
                      |||+ ..||+||+++
T Consensus       162 vgD~-~~Di~~A~~~  175 (175)
T TIGR01493       162 VAAH-QWDLIGARKF  175 (175)
T ss_pred             EecC-hhhHHHHhcC
Confidence            9999 5899999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.36  E-value=3.5e-06  Score=85.75  Aligned_cols=50  Identities=20%  Similarity=0.223  Sum_probs=42.0

Q ss_pred             HHHhhhcCccEEEEeccceeecCC-------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           22 RHIAETRRFKAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        22 ~~~~~~~~~~~vlfDlDGvL~~g~-------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      .++..  +.+.++||+||||....             .++||+.+.|+.|++.|++++|+||.+.
T Consensus       162 ~~~~~--~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       162 AGVKG--QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             CCcCc--cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            34445  57899999999999743             2689999999999999999999999653

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.36  E-value=1.4e-06  Score=74.85  Aligned_cols=100  Identities=21%  Similarity=0.222  Sum_probs=65.2

Q ss_pred             ccEEEEeccceeecCCc-------------cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccc
Q 019991           30 FKAWLLDQFGVLHDGKK-------------PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAI   96 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-------------~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Ii   96 (332)
                      ++.|+||+||||.++..             +.++  .+|++|+++|++++++||+++..  ....++++|+... |+...
T Consensus         1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~G~~i~IvTn~~~~~--~~~~l~~~gi~~~-~~~~~   75 (154)
T TIGR01670         1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKSGIEVAIITGRKAKL--VEDRCKTLGITHL-YQGQS   75 (154)
T ss_pred             CeEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHCCCEEEEEECCCCHH--HHHHHHHcCCCEE-Eeccc
Confidence            47899999999998532             1122  37999999999999999987543  4567889999876 45544


Q ss_pred             ccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991           97 TSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus        97 ts~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      ...+.....+.+.+.+     ..+++.+|.+..+...++..|+
T Consensus        76 ~k~~~~~~~~~~~~~~-----~~~~~~vGDs~~D~~~~~~ag~  113 (154)
T TIGR01670        76 NKLIAFSDILEKLALA-----PENVAYIGDDLIDWPVMEKVGL  113 (154)
T ss_pred             chHHHHHHHHHHcCCC-----HHHEEEECCCHHHHHHHHHCCC
Confidence            4445555555554321     1356667765443334445444

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.35  E-value=2.9e-06  Score=74.05  Aligned_cols=94  Identities=17%  Similarity=0.119  Sum_probs=64.5

Q ss_pred             cCccEEEEeccceeec--CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHD--GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~--g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~  105 (332)
                      ..++++++|+||||+.  ...++||+.++|+.|++.|++++++||++.. ......++.+|+... +...-...+.....
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~-~~~~~~~~~~gl~~~-~~~~KP~p~~~~~~  100 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGE-QRAKAVEKALGIPVL-PHAVKPPGCAFRRA  100 (170)
T ss_pred             CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchH-HHHHHHHHHcCCEEE-cCCCCCChHHHHHH
Confidence            4789999999999995  4468999999999999999999999998631 112233467777643 22333444555555


Q ss_pred             HhhcCChhhhhcCCeEEEeecCc
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSD  128 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~  128 (332)
                      +++.+.+     .++++++|.+.
T Consensus       101 l~~~~~~-----~~~~l~IGDs~  118 (170)
T TIGR01668       101 HPEMGLT-----SEQVAVVGDRL  118 (170)
T ss_pred             HHHcCCC-----HHHEEEECCcc
Confidence            6555421     24577777643

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.33  E-value=1.3e-06  Score=76.35  Aligned_cols=104  Identities=17%  Similarity=0.141  Sum_probs=71.2

Q ss_pred             CccEEEEeccceeecCCccCcCHHH-----------HHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccc
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAIS-----------TLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e-----------~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iit   97 (332)
                      ++++++||+||||.++.-.+....+           .++.|+++|++++++||++...  ....++++|+... |+.+..
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~--~~~~l~~lgi~~~-f~~~kp   82 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGA--VRHRAEELKIKRF-HEGIKK   82 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHH--HHHHHHHCCCcEE-EecCCC
Confidence            5899999999999999755544433           8999999999999999986543  4567899999876 565544


Q ss_pred             cHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCcc
Q 019991           98 SGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus        98 s~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                      ..+.....+.+.+..     ..+++.+|.+..+...++..|+.
T Consensus        83 kp~~~~~~~~~l~~~-----~~ev~~iGD~~nDi~~~~~ag~~  120 (169)
T TIGR02726        83 KTEPYAQMLEEMNIS-----DAEVCYVGDDLVDLSMMKRVGLA  120 (169)
T ss_pred             CHHHHHHHHHHcCcC-----HHHEEEECCCHHHHHHHHHCCCe
Confidence            445555555555321     13566677654333345555553

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.25  E-value=7.6e-06  Score=71.38  Aligned_cols=94  Identities=12%  Similarity=0.034  Sum_probs=63.6

Q ss_pred             cccCHHHHHHHHHHHHhCCCc---EEEecCCccceeccceecCCChhHHHHHHh-cCccc--ccCCCCHHHHHHHHHHhC
Q 019991          167 RPMSLQDLEKILEICASKKIP---MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVR--WMGKPDKLWATLFTMILR  240 (332)
Q Consensus       167 ~~~~y~~l~~~l~~l~~~g~~---lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~--~~GKP~p~if~~Al~~lg  240 (332)
                      ...-++.+.+.++.+++.+..   +|+||........      .+.-++.++.. |-...  ...||  .-++.+++.++
T Consensus        57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~------~~~~a~~~~~~lgIpvl~h~~kKP--~~~~~i~~~~~  128 (168)
T PF09419_consen   57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDP------DGERAEALEKALGIPVLRHRAKKP--GCFREILKYFK  128 (168)
T ss_pred             cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCc------cHHHHHHHHHhhCCcEEEeCCCCC--ccHHHHHHHHh
Confidence            333457888889888776543   6889975443311      12345566663 65543  24688  44555555543


Q ss_pred             C---------eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          241 V---------QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       241 ~---------~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .         .+||||++.|||.+|+++|+.+||+.+
T Consensus       129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~  165 (168)
T PF09419_consen  129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD  165 (168)
T ss_pred             hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence            1         589999999999999999999999964

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.15  E-value=3.7e-06  Score=73.89  Aligned_cols=68  Identities=16%  Similarity=0.133  Sum_probs=53.7

Q ss_pred             ccEEEEeccceeecC---------------------------CccCcCHHHHHHHHHHCCCeEEEEeCC-CCChhHHHHH
Q 019991           30 FKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNS-SRRASTTIDK   81 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g---------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~-s~~~~~~~~~   81 (332)
                      .+.++||+|+|+|+.                           ..++||+.++|+.|+++|++++++||+ +..  .....
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~--~~~~~   79 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPE--WAYEI   79 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChH--HHHHH
Confidence            478999999999973                           267999999999999999999999998 443  23456


Q ss_pred             HHhCCCC---------ccccccccccHH
Q 019991           82 LKSLGFD---------PSLFAGAITSGE  100 (332)
Q Consensus        82 L~~lGl~---------~~~f~~Iits~~  100 (332)
                      |+.+|+.         .. |+.++++.+
T Consensus        80 L~~~~l~~~~~~~~~~~~-Fd~iv~~~~  106 (174)
T TIGR01685        80 LGTFEITYAGKTVPMHSL-FDDRIEIYK  106 (174)
T ss_pred             HHhCCcCCCCCcccHHHh-ceeeeeccC
Confidence            7888887         55 567776643

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.15  E-value=5e-06  Score=79.98  Aligned_cols=96  Identities=7%  Similarity=-0.012  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCC-hhHHHHHHh-----cC--cccccCCCCHHHHHHHHHHhCC
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG-TLASKFEKL-----GG--EVRWMGKPDKLWATLFTMILRV  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G-~i~~~~e~~-----g~--e~~~~GKP~p~if~~Al~~lg~  241 (332)
                      ++++.++++.+++.|.++ |+|+....+...-...++.- .+...++..     |.  .....+||++..+..+++++|+
T Consensus       183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi  262 (322)
T PRK11133        183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEI  262 (322)
T ss_pred             ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCC
Confidence            477888888888888885 77776543322100001100 011111110     11  1234579999999999999997


Q ss_pred             ----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 ----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                          +++|||+. +|+.++++||+..++ |-
T Consensus       263 ~~~qtIaVGDg~-NDl~m~~~AGlgiA~-nA  291 (322)
T PRK11133        263 PLAQTVAIGDGA-NDLPMIKAAGLGIAY-HA  291 (322)
T ss_pred             ChhhEEEEECCH-HHHHHHHHCCCeEEe-CC
Confidence                69999995 899999999998776 53

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.13  E-value=6.6e-06  Score=72.64  Aligned_cols=109  Identities=18%  Similarity=0.190  Sum_probs=68.4

Q ss_pred             HHHHhhhcCccEEEEeccceeecC-------C-ccCcCHH---HHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           21 LRHIAETRRFKAWLLDQFGVLHDG-------K-KPYPGAI---STLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        21 ~~~~~~~~~~~~vlfDlDGvL~~g-------~-~~ipGa~---e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      +.+...  .++.|+||+||||.++       . ...+-..   ..++.|+++|++++++||++..  .....++++|+..
T Consensus        14 ~~~~~~--~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~--~v~~~l~~lgl~~   89 (183)
T PRK09484         14 VMAKAE--NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSK--LVEDRMTTLGITH   89 (183)
T ss_pred             HHHHhh--CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcH--HHHHHHHHcCCce
Confidence            334445  6999999999999986       2 2222222   5789999999999999997643  3456778899876


Q ss_pred             cccccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991           90 SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus        90 ~~f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      . |...-.........+++.+..     ...++.+|.+..+...++..|+
T Consensus        90 ~-f~g~~~k~~~l~~~~~~~gl~-----~~ev~~VGDs~~D~~~a~~aG~  133 (183)
T PRK09484         90 L-YQGQSNKLIAFSDLLEKLAIA-----PEQVAYIGDDLIDWPVMEKVGL  133 (183)
T ss_pred             e-ecCCCcHHHHHHHHHHHhCCC-----HHHEEEECCCHHHHHHHHHCCC
Confidence            5 443222334444445544321     1356667765544445555555

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.11  E-value=5.7e-06  Score=76.19  Aligned_cols=94  Identities=5%  Similarity=0.029  Sum_probs=63.6

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceecc-ceecCCChh--HHHHHHh-cCcccccCCCCHHHHHHHHHHhCCeE
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEAR-ALRVMPGTL--ASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQM  243 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~-~~~l~~G~i--~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~l  243 (332)
                      ..|+++.++++.+.++|.++ ++||.+....... .......++  ..++..+ +++.  ..||++.-   +++++++.+
T Consensus       114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~--~~K~~K~~---~l~~~~i~I  188 (237)
T PRK11009        114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK--PGQYTKTQ---WLKKKNIRI  188 (237)
T ss_pred             cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC--CCCCCHHH---HHHhcCCeE
Confidence            45688999999998999985 8899753211100 001111223  4444443 3332  37888863   667889999


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||+. .|+++|++||+++|.+.+
T Consensus       189 ~IGDs~-~Di~aA~~AGi~~I~v~~  212 (237)
T PRK11009        189 FYGDSD-NDITAAREAGARGIRILR  212 (237)
T ss_pred             EEcCCH-HHHHHHHHcCCcEEEEec
Confidence            999995 899999999999998854

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.10  E-value=1.2e-05  Score=74.07  Aligned_cols=67  Identities=13%  Similarity=0.078  Sum_probs=50.4

Q ss_pred             EEEEeccceeecCC-----------------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC-Ch
Q 019991           32 AWLLDQFGVLHDGK-----------------------------------KPYPGAISTLEMLATTGAKMVVISNSSR-RA   75 (332)
Q Consensus        32 ~vlfDlDGvL~~g~-----------------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~   75 (332)
                      +|+||+|||+.++.                                   .++||+.++|+.|+++|++++++||.+. ..
T Consensus        65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~  144 (237)
T PRK11009         65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT  144 (237)
T ss_pred             EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence            99999999999732                                   2567799999999999999999999763 23


Q ss_pred             hHHHHHHH-hCCCC--ccccccccccH
Q 019991           76 STTIDKLK-SLGFD--PSLFAGAITSG   99 (332)
Q Consensus        76 ~~~~~~L~-~lGl~--~~~f~~Iits~   99 (332)
                      +...+.|. .+|++  .. |..+++++
T Consensus       145 ~~t~~~Llk~~gip~~~~-f~vil~gd  170 (237)
T PRK11009        145 ETVSKTLADDFHIPADNM-NPVIFAGD  170 (237)
T ss_pred             HHHHHHHHHHcCCCcccc-eeEEEcCC
Confidence            44555555 59994  43 45555544

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.09  E-value=8.3e-06  Score=77.02  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=57.6

Q ss_pred             ccEEEEeccceeec-------------CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc-cccccc
Q 019991           30 FKAWLLDQFGVLHD-------------GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP-SLFAGA   95 (332)
Q Consensus        30 ~~~vlfDlDGvL~~-------------g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~-~~f~~I   95 (332)
                      .+.++||+||||.+             ...++||+.++++.|+++|++++++||++...  ....++.+|+.. . |+.+
T Consensus       158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~--~~~~l~~l~~~~~~-f~~i  234 (300)
T PHA02530        158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVC--EEDTVEWLRQTDIW-FDDL  234 (300)
T ss_pred             CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhh--HHHHHHHHHHcCCc-hhhh
Confidence            57899999999998             55789999999999999999999999987533  223445555554 4 5666


Q ss_pred             cccHHHHHHHHhhcC
Q 019991           96 ITSGELTHQYLLRRD  110 (332)
Q Consensus        96 its~~v~~~~L~~~~  110 (332)
                      ++.. ....|++...
T Consensus       235 ~~~~-~~~~~~~~~~  248 (300)
T PHA02530        235 IGRP-PDMHFQREQG  248 (300)
T ss_pred             hCCc-chhhhcccCC
Confidence            6655 4555776643

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.02  E-value=1.2e-05  Score=75.30  Aligned_cols=61  Identities=20%  Similarity=0.177  Sum_probs=50.8

Q ss_pred             cCccEEEEeccceeec-CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           28 RRFKAWLLDQFGVLHD-GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~-g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      +.++.+++|+||||.+ +....+++.++|++|++.|++++++|+.+.  ..+...++.+|+..+
T Consensus         2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~--~~~~~~~~~l~l~~~   63 (273)
T PRK00192          2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTA--AEVEVLRKELGLEDP   63 (273)
T ss_pred             CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHcCCCCC
Confidence            4689999999999999 556889999999999999999999998653  345567788887643

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.00  E-value=1.4e-05  Score=68.18  Aligned_cols=109  Identities=23%  Similarity=0.255  Sum_probs=75.2

Q ss_pred             HHhhhcCccEEEEeccceeecCCccCcCHHH-----------HHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccc
Q 019991           23 HIAETRRFKAWLLDQFGVLHDGKKPYPGAIS-----------TLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL   91 (332)
Q Consensus        23 ~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e-----------~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~   91 (332)
                      +.++  +++..++|+||||.+|.-.+..-.|           -|+.|.+.|++++++|.  |.+.-+..+.+.+|+... 
T Consensus         3 ~ra~--~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITG--r~s~ive~Ra~~LGI~~~-   77 (170)
T COG1778           3 ARAK--NIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITG--RDSPIVEKRAKDLGIKHL-   77 (170)
T ss_pred             hhhh--hceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeC--CCCHHHHHHHHHcCCcee-
Confidence            3455  7999999999999998865554433           57888999999999996  444557789999999977 


Q ss_pred             cccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccc
Q 019991           92 FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKV  141 (332)
Q Consensus        92 f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~  141 (332)
                      |..+-....+..+.+++.+...     +.+..+|.+......|+..|+..
T Consensus        78 ~qG~~dK~~a~~~L~~~~~l~~-----e~~ayiGDD~~Dlpvm~~vGls~  122 (170)
T COG1778          78 YQGISDKLAAFEELLKKLNLDP-----EEVAYVGDDLVDLPVMEKVGLSV  122 (170)
T ss_pred             eechHhHHHHHHHHHHHhCCCH-----HHhhhhcCccccHHHHHHcCCcc
Confidence            6666666666666666554311     12333444444455677777644

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=97.99  E-value=1.5e-05  Score=72.78  Aligned_cols=56  Identities=23%  Similarity=0.199  Sum_probs=47.3

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .|+||+||||+++....+++.++|++|+++|++++++|+.+  ...+...++.+|+..
T Consensus         1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~TgR~--~~~~~~~~~~lg~~~   56 (225)
T TIGR02461         1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVSSKT--RAEQEYYREELGVEP   56 (225)
T ss_pred             CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHcCCCC
Confidence            37899999999988888999999999999999999998644  344666778888854

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.97  E-value=1.7e-05  Score=68.82  Aligned_cols=58  Identities=24%  Similarity=0.344  Sum_probs=46.3

Q ss_pred             cEEEEeccceeecCC------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC-------------ChhHHHHHHHhC
Q 019991           31 KAWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSR-------------RASTTIDKLKSL   85 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~-------------~~~~~~~~L~~l   85 (332)
                      ++++||-||||....            .++||+.++|++|+++|++++++||++.             ....+.+.|+++
T Consensus         2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~   81 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ   81 (161)
T ss_pred             CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC
Confidence            578999999999832            5789999999999999999999999741             112344557888


Q ss_pred             CCC
Q 019991           86 GFD   88 (332)
Q Consensus        86 Gl~   88 (332)
                      |+.
T Consensus        82 gl~   84 (161)
T TIGR01261        82 GII   84 (161)
T ss_pred             CCc
Confidence            886

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.96  E-value=6.7e-05  Score=72.62  Aligned_cols=37  Identities=24%  Similarity=0.236  Sum_probs=30.7

Q ss_pred             cceeecCC--------ccCcCHHHHHHHHHHCCCeEEEEeCCCCC
Q 019991           38 FGVLHDGK--------KPYPGAISTLEMLATTGAKMVVISNSSRR   74 (332)
Q Consensus        38 DGvL~~g~--------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~   74 (332)
                      +|.+....        ...||+.++|++|+++|++++++||++..
T Consensus       168 ~g~lk~~v~~dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~  212 (343)
T TIGR02244       168 KGSLKKKVMENPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYD  212 (343)
T ss_pred             cchHHHHHHHCHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHH
Confidence            56666432        56899999999999999999999998753

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.95  E-value=0.00037  Score=64.17  Aligned_cols=57  Identities=14%  Similarity=0.029  Sum_probs=44.5

Q ss_pred             EEEEeccceeec---CC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           32 AWLLDQFGVLHD---GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        32 ~vlfDlDGvL~~---g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++.|+||||.+   +. ...|...++++.++++|++++++|..  +..++...++.+++..+
T Consensus         3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR--~~~~~~~~~~~~~~~~p   63 (249)
T TIGR01485         3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGR--SPHSYKELQKQKPLLTP   63 (249)
T ss_pred             EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCC--CHHHHHHHHhcCCCCCC
Confidence            678899999995   33 56788899999999999999999964  44455566677777654

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PTZ00445 p36-lilke protein; Provisional

Probab=97.95  E-value=0.00015  Score=65.20  Aligned_cols=48  Identities=6%  Similarity=-0.085  Sum_probs=41.6

Q ss_pred             ccCCCCHHH--H--HHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          223 WMGKPDKLW--A--TLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       223 ~~GKP~p~i--f--~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      .+-||.|.+  |  +.++++.|+    +++|-|+. ..+++|.+.|++++.+...+.
T Consensus       154 gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~~e~  209 (219)
T PTZ00445        154 GLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTGNEG  209 (219)
T ss_pred             cccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCChHh
Confidence            456999999  9  999999998    68999996 579999999999999975544

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.93  E-value=2.1e-05  Score=71.07  Aligned_cols=60  Identities=15%  Similarity=0.177  Sum_probs=47.5

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||.+... +-|...++|++|++.|++++++|..+.  ..+...++.+|+..
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~--~~~~~~~~~l~~~~   61 (230)
T PRK01158          1 MKIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVL--CFARAAAKLIGTSG   61 (230)
T ss_pred             CceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCch--HHHHHHHHHhCCCC
Confidence            3578999999999998776 457889999999999999999997553  23444556777753

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.93  E-value=2.6e-05  Score=72.99  Aligned_cols=69  Identities=28%  Similarity=0.371  Sum_probs=54.7

Q ss_pred             CccEEEEeccceeecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHH
Q 019991           29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSR-RASTTID   80 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~---------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~   80 (332)
                      +..+|+||+|+|+.+..                           .++||+.++|+.|+++|++++++||++. ..+...+
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~  153 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK  153 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence            56799999999996422                           4679999999999999999999999875 3455678


Q ss_pred             HHHhCCCCccccccccc
Q 019991           81 KLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        81 ~L~~lGl~~~~f~~Iit   97 (332)
                      .|+++|++...++.++.
T Consensus       154 ~Lkk~Gi~~~~~d~lll  170 (266)
T TIGR01533       154 NLKRFGFPQADEEHLLL  170 (266)
T ss_pred             HHHHcCcCCCCcceEEe
Confidence            89999998642244444

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=97.88  E-value=3.8e-05  Score=63.87  Aligned_cols=81  Identities=14%  Similarity=0.103  Sum_probs=59.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecC-CccceeccceecCCCh-------hHHHHHHh-cCcccccCCCCHHHHHHHHHHh
Q 019991          170 SLQDLEKILEICASKKIPM-VVANP-DYVTVEARALRVMPGT-------LASKFEKL-GGEVRWMGKPDKLWATLFTMIL  239 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~-D~~~~~~~~~~l~~G~-------i~~~~e~~-g~e~~~~GKP~p~if~~Al~~l  239 (332)
                      .|+++.++++.|+++|+++ ++||. .......   .+....       +..+|+.+ +++    .||+|.+|..+++++
T Consensus        30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~---~l~~~~~~~~i~~l~~~f~~~~~~~----~~pkp~~~~~a~~~l  102 (128)
T TIGR01681        30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYE---LLKIFEDFGIIFPLAEYFDPLTIGY----WLPKSPRLVEIALKL  102 (128)
T ss_pred             HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHH---HHHhccccccchhhHhhhhhhhhcC----CCcHHHHHHHHHHHh
Confidence            5899999999999999985 88987 4443322   122223       56777774 443    369999999999999


Q ss_pred             C--C----eEEEeCChhhHHHHHHH
Q 019991          240 R--V----QMQLESSPYSLLEGSMQ  258 (332)
Q Consensus       240 g--~----~lmIGDs~~~DI~gA~~  258 (332)
                      |  +    ++||||++ .|+...++
T Consensus       103 g~~~~p~~~l~igDs~-~n~~~~~~  126 (128)
T TIGR01681       103 NGVLKPKSILFVDDRP-DNNEEVDY  126 (128)
T ss_pred             cCCCCcceEEEECCCH-hHHHHHHh
Confidence            9  7    69999995 67776554

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.86  E-value=4e-05  Score=63.83  Aligned_cols=42  Identities=19%  Similarity=0.253  Sum_probs=35.9

Q ss_pred             cEEEEeccceeecCC-------ccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           31 KAWLLDQFGVLHDGK-------KPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~-------~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      ++|+||+||||....       .+.+++.+.++.+++.|..++++|..+
T Consensus         2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~   50 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRN   50 (126)
T ss_pred             CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            689999999999753       255788999999999999999999754

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01686 FkbH FkbH-like domain

Probab=97.85  E-value=1.6e-05  Score=76.36  Aligned_cols=66  Identities=14%  Similarity=0.133  Sum_probs=53.2

Q ss_pred             CccEEEEeccceeecCC------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh----CCCCcccc
Q 019991           29 RFKAWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS----LGFDPSLF   92 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~----lGl~~~~f   92 (332)
                      .++++++|+|+|||.|.            .++||+.++|+.|+++|+.++++|||..  +...+.|++    +|+... |
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~--~~a~~~l~~~~~~~~~~~~-f   78 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDE--DDAKKVFERRKDFILQAED-F   78 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCH--HHHHHHHHhCccccCcHHH-e
Confidence            36899999999999985            4689999999999999999999999865  234566777    777765 4


Q ss_pred             ccccc
Q 019991           93 AGAIT   97 (332)
Q Consensus        93 ~~Iit   97 (332)
                      ..+..
T Consensus        79 ~~~~~   83 (320)
T TIGR01686        79 DARSI   83 (320)
T ss_pred             eEEEE
Confidence            54433

The C-terminal portion of this domain is unique to this family (by BLAST).

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.78  E-value=4.1e-05  Score=65.21  Aligned_cols=70  Identities=20%  Similarity=0.074  Sum_probs=52.3

Q ss_pred             ccEEEEeccceeecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHH
Q 019991           30 FKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL   82 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~---------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L   82 (332)
                      ...+++|+||||....                           .++||+.|+|++|+ .+++++++||+++..  ....+
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~--~~~il   78 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMY--ADPVL   78 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHH--HHHHH
Confidence            4578999999999963                           45899999999998 579999999987643  33457


Q ss_pred             HhCCCCccccccccccHHHH
Q 019991           83 KSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        83 ~~lGl~~~~f~~Iits~~v~  102 (332)
                      +++|+....|+.++++.+..
T Consensus        79 ~~l~~~~~~f~~i~~~~d~~   98 (148)
T smart00577       79 DLLDPKKYFGYRRLFRDECV   98 (148)
T ss_pred             HHhCcCCCEeeeEEECcccc
Confidence            77887543136666665443

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=97.77  E-value=2.4e-05  Score=68.45  Aligned_cols=82  Identities=10%  Similarity=-0.050  Sum_probs=58.8

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCc-ccccCCCCHHHHHHHHHHhCC----eEEEeCChh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE-VRWMGKPDKLWATLFTMILRV----QMQLESSPY  250 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e-~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~  250 (332)
                      +++.|.++|+++ |+||.......            ..++..+.. .....||+|..++.+++++++    .++|||++ 
T Consensus        42 ~~~~L~~~Gi~laIiT~k~~~~~~------------~~l~~lgi~~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-  108 (169)
T TIGR02726        42 GVIVLQLCGIDVAIITSKKSGAVR------------HRAEELKIKRFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDL-  108 (169)
T ss_pred             HHHHHHHCCCEEEEEECCCcHHHH------------HHHHHCCCcEEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCH-
Confidence            455678899986 88987554322            222222221 112248999999999999998    69999995 


Q ss_pred             hHHHHHHHcCCcEEEEecchh
Q 019991          251 SLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       251 ~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      .|+.+++++|+..+--|..+.
T Consensus       109 nDi~~~~~ag~~~am~nA~~~  129 (169)
T TIGR02726       109 VDLSMMKRVGLAVAVGDAVAD  129 (169)
T ss_pred             HHHHHHHHCCCeEECcCchHH
Confidence            899999999998887776543

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.77  E-value=0.00085  Score=61.17  Aligned_cols=55  Identities=9%  Similarity=0.100  Sum_probs=44.2

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .+++|+||||++....++...+.++ ++++|++++++|.  |+...+...+..+++..
T Consensus         1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaTG--R~~~~v~~~~~~l~l~~   55 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIATG--RSVESAKSRYAKLNLPS   55 (236)
T ss_pred             CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEeC--CCHHHHHHHHHhCCCCC
Confidence            3789999999998877777777777 6889999999996  44556777888888863

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.77  E-value=5.5e-05  Score=68.02  Aligned_cols=57  Identities=14%  Similarity=0.152  Sum_probs=45.5

Q ss_pred             ccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++.|++|+||||++... +-|.+.++|++|++.|++++++|+.+..  .+...++.+++.
T Consensus         1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~--~~~~~~~~l~~~   58 (215)
T TIGR01487         1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVP--FARALAVLIGTS   58 (215)
T ss_pred             CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcch--hHHHHHHHhCCC
Confidence            46899999999998765 6689999999999999999999986542  244445666665

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.74  E-value=6.3e-05  Score=69.80  Aligned_cols=60  Identities=17%  Similarity=0.173  Sum_probs=47.9

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||++... +-+...++|++++++|++++++|..+.  ..+...++.+|+..
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~--~~~~~~~~~l~~~~   61 (270)
T PRK10513          1 MAIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTTGRPY--AGVHRYLKELHMEQ   61 (270)
T ss_pred             CceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEecCCCh--HHHHHHHHHhCCCC
Confidence            3588999999999999764 557888999999999999999997553  33455667777753

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.73  E-value=6.7e-05  Score=70.07  Aligned_cols=58  Identities=19%  Similarity=0.162  Sum_probs=48.0

Q ss_pred             CccEEEEeccceeecCCccC-cCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~i-pGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      +++.|++|+||||++....+ +...++|++|+++|++++++|..+  ...+...++.+|++
T Consensus         6 ~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~--~~~i~~~~~~l~~~   64 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKT--AAEMLPLQQTLGLQ   64 (271)
T ss_pred             CCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCC--HHHHHHHHHHhCCC
Confidence            68999999999999987655 678899999999999999999755  33455667788874

>smart00775 LNS2 LNS2 domain

Probab=97.71  E-value=7.3e-05  Score=64.54  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=38.4

Q ss_pred             EEEEeccceeecCC------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           32 AWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        32 ~vlfDlDGvL~~g~------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      .|++|+||||.++.            ...||+.+++++++++|++++++|..+.
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~   54 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPI   54 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcH
Confidence            37999999999986            7799999999999999999999998764

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.70  E-value=8.5e-05  Score=70.17  Aligned_cols=59  Identities=19%  Similarity=0.180  Sum_probs=48.0

Q ss_pred             ccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           30 FKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ++.|++|+||||++.. ..++-+.++|++|+++|+++++.|..+  ..++...++++|+..+
T Consensus         1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt--~~ev~~l~~~Lgl~~p   60 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYSLRT--RAQLEHLCRQLRLEHP   60 (302)
T ss_pred             CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHhCCCCe
Confidence            3689999999999955 478889999999999999999999754  3445666678888643

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.70  E-value=7.7e-05  Score=68.96  Aligned_cols=54  Identities=24%  Similarity=0.261  Sum_probs=46.5

Q ss_pred             EEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           33 WLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        33 vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      +++|+||||+++.. .++.+.++|+.|++.|++++++|+  |+...+...++.+|+.
T Consensus         2 i~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~Tg--R~~~~~~~~~~~~~~~   56 (256)
T TIGR01486         2 IFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTS--KTAAEVEYLRKELGLE   56 (256)
T ss_pred             EEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcC--CCHHHHHHHHHHcCCC
Confidence            78999999999887 788899999999999999999986  4444566778888875

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.66  E-value=0.00028  Score=61.05  Aligned_cols=98  Identities=17%  Similarity=0.125  Sum_probs=68.4

Q ss_pred             cHHHHhhhcCccEEEEeccceeecCC--ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccc
Q 019991           20 GLRHIAETRRFKAWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        20 ~~~~~~~~~~~~~vlfDlDGvL~~g~--~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iit   97 (332)
                      +...+.. ..++++++|+|-||..-.  ..-|.+.+.++.+++.|+++.++||++..+  +....+++|++-. +..---
T Consensus        19 ~~~~L~~-~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~R--V~~~~~~l~v~fi-~~A~KP   94 (175)
T COG2179          19 TPDILKA-HGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESR--VARAAEKLGVPFI-YRAKKP   94 (175)
T ss_pred             CHHHHHH-cCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHH--HHhhhhhcCCcee-ecccCc
Confidence            3444444 579999999999997644  667888899999999999999999986433  4445677888754 344445


Q ss_pred             cHHHHHHHHhhcCChhhhhcCCeEEEeec
Q 019991           98 SGELTHQYLLRRDDAWFAALGRSCIHMTW  126 (332)
Q Consensus        98 s~~v~~~~L~~~~~~~~~~~G~~v~~~g~  126 (332)
                      .+......+++.+.+     -+.|..+|.
T Consensus        95 ~~~~fr~Al~~m~l~-----~~~vvmVGD  118 (175)
T COG2179          95 FGRAFRRALKEMNLP-----PEEVVMVGD  118 (175)
T ss_pred             cHHHHHHHHHHcCCC-----hhHEEEEcc
Confidence            555666666666543     134555554

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.66  E-value=9e-05  Score=66.74  Aligned_cols=54  Identities=20%  Similarity=0.247  Sum_probs=44.3

Q ss_pred             EEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           33 WLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        33 vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      +++|+||||.++.. ..+...++|++|+++|++++++||.+.  ..+...++.+|+.
T Consensus         2 i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~--~~~~~~~~~l~~~   56 (221)
T TIGR02463         2 VFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTA--AEVEYLQKALGLT   56 (221)
T ss_pred             EEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCH--HHHHHHHHHcCCC
Confidence            78999999999765 566689999999999999999999664  3345566778875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10976 putative hydrolase; Provisional

Probab=97.66  E-value=0.0001  Score=68.31  Aligned_cols=58  Identities=19%  Similarity=0.197  Sum_probs=46.8

Q ss_pred             ccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.+++|+||||++... +-|...++|++++++|++++++|..+.  ..+...++.+|+..
T Consensus         2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~--~~~~~~~~~l~~~~   60 (266)
T PRK10976          2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGRHH--VDVGQIRDNLEIKS   60 (266)
T ss_pred             ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCh--HHHHHHHHhcCCCC
Confidence            68999999999999765 667788999999999999999997543  33445567777753

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.62  E-value=0.00012  Score=67.75  Aligned_cols=60  Identities=27%  Similarity=0.345  Sum_probs=49.9

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||.+... .-+...++|+++++.|++++++|..+.  ..+...++.+|+..
T Consensus         1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~--~~~~~~~~~l~~~~   61 (264)
T COG0561           1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPL--PDVLSILEELGLDG   61 (264)
T ss_pred             CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCCh--HHHHHHHHHcCCCc
Confidence            3689999999999999886 667778999999999999999998654  44566777888874

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.62  E-value=0.00013  Score=67.91  Aligned_cols=58  Identities=17%  Similarity=0.108  Sum_probs=47.2

Q ss_pred             ccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.+++|+||||++... +-+...++|++|+++|++++++|..+  ...+...++.+|+..
T Consensus         2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~--~~~~~~~~~~l~~~~   60 (272)
T PRK15126          2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRH--VLEMQHILGALSLDA   60 (272)
T ss_pred             ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCC--HHHHHHHHHHcCCCC
Confidence            68999999999998664 67778899999999999999999754  334556677788753

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.59  E-value=9.3e-06  Score=69.18  Aligned_cols=86  Identities=7%  Similarity=-0.095  Sum_probs=63.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHH-HHHHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLAS-KFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~-~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .++++.+.++.|. ++.++ |+||....+....   +..-.+.. .|+.+ +++....+||.   |.++++++|.    +
T Consensus        46 l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~i---l~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~  118 (148)
T smart00577       46 KRPGVDEFLKRAS-ELFELVVFTAGLRMYADPV---LDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNV  118 (148)
T ss_pred             ECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHH---HHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcE
Confidence            3689999999986 67775 8898877654421   22222322 33554 77888889997   9999999997    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcE
Q 019991          243 MQLESSPYSLLEGSMQLNLDL  263 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~t  263 (332)
                      +||||++ .|++.|+++|+..
T Consensus       119 i~i~Ds~-~~~~aa~~ngI~i  138 (148)
T smart00577      119 IIIDDSP-DSWPFHPENLIPI  138 (148)
T ss_pred             EEEECCH-HHhhcCccCEEEe
Confidence            9999995 7999999998764

>TIGR01686 FkbH FkbH-like domain

Probab=97.56  E-value=0.00018  Score=69.07  Aligned_cols=85  Identities=8%  Similarity=-0.017  Sum_probs=64.0

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC----ChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC---
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP----GTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV---  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~----G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~---  241 (332)
                      .|++++++++.|+++|+++ |+||.+......   .+..    -.+..+|..+    ....||+|..+..+++++|+   
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~---~l~~~~~~~~~~~~f~~~----~~~~~pk~~~i~~~~~~l~i~~~  104 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKK---VFERRKDFILQAEDFDAR----SINWGPKSESLRKIAKKLNLGTD  104 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHhCccccCcHHHeeEE----EEecCchHHHHHHHHHHhCCCcC
Confidence            4899999999999999986 888887653322   1222    2344455543    12259999999999999987   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCc
Q 019991          242 -QMQLESSPYSLLEGSMQLNLD  262 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~  262 (332)
                       .+||||++ .|++++++++-.
T Consensus       105 ~~vfidD~~-~d~~~~~~~lp~  125 (320)
T TIGR01686       105 SFLFIDDNP-AERANVKITLPV  125 (320)
T ss_pred             cEEEECCCH-HHHHHHHHHCCC
Confidence             69999995 799999997764

The C-terminal portion of this domain is unique to this family (by BLAST).

>PTZ00174 phosphomannomutase; Provisional

Probab=97.53  E-value=0.00018  Score=66.44  Aligned_cols=54  Identities=22%  Similarity=0.222  Sum_probs=43.9

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLK   83 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~   83 (332)
                      |+++.+++|+||||.++.. +-|...++|++++++|++++++|..+  ...+.+.+.
T Consensus         3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~--~~~i~~~l~   57 (247)
T PTZ00174          3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSD--YPKIKEQLG   57 (247)
T ss_pred             CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHh
Confidence            6799999999999999875 66778899999999999999999754  333444443

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.50  E-value=0.00017  Score=64.78  Aligned_cols=54  Identities=19%  Similarity=0.202  Sum_probs=42.3

Q ss_pred             EEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           33 WLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        33 vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++||+||||+++.. +-|...++|+++++.|++++++|..+.  ..+...++.+|++
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~--~~~~~~~~~l~~~   55 (225)
T TIGR01482         1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSV--QFARALAKLIGTP   55 (225)
T ss_pred             CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCch--HHHHHHHHHhCCC
Confidence            58999999999875 557778999999999999999997543  3344556677754

catalyze the same reaction as SPP.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.48  E-value=0.00062  Score=58.35  Aligned_cols=79  Identities=8%  Similarity=-0.040  Sum_probs=57.1

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPY  250 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~  250 (332)
                      +++.|+++|.++ |+||......            ...++..|-.. ....||+|..++.+++++|+    ++||||+. 
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~------------~~~l~~~gi~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~vGDs~-  102 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLV------------EDRCKTLGITHLYQGQSNKLIAFSDILEKLALAPENVAYIGDDL-  102 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHH------------HHHHHHcCCCEEEecccchHHHHHHHHHHcCCCHHHEEEECCCH-
Confidence            788888999985 8898654322            22222222221 22348999999999999997    69999995 


Q ss_pred             hHHHHHHHcCCcEEEEecc
Q 019991          251 SLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       251 ~DI~gA~~aG~~ti~~~~~  269 (332)
                      +|+.+++++|+. +.+...
T Consensus       103 ~D~~~~~~ag~~-~~v~~~  120 (154)
T TIGR01670       103 IDWPVMEKVGLS-VAVADA  120 (154)
T ss_pred             HHHHHHHHCCCe-EecCCc
Confidence            899999999997 655433

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.46  E-value=0.00026  Score=65.22  Aligned_cols=55  Identities=25%  Similarity=0.361  Sum_probs=44.8

Q ss_pred             EEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      .+++|+||||++... +-+...++|++|+++|++++++|+.+.  ..+...++.+|+.
T Consensus         1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~--~~~~~~~~~~~~~   56 (256)
T TIGR00099         1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPY--KEVKNILKELGLD   56 (256)
T ss_pred             CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCH--HHHHHHHHHcCCC
Confidence            378999999999865 557889999999999999999998653  3455566777775

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=97.43  E-value=6.3e-05  Score=66.54  Aligned_cols=80  Identities=14%  Similarity=0.015  Sum_probs=56.5

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc---cc--cCCCCHHHHHHHHHHhCC
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV---RW--MGKPDKLWATLFTMILRV  241 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~---~~--~GKP~p~if~~Al~~lg~  241 (332)
                      ...++++.++++.|++.|+++ ++|+........            ..+.+|-..   ..  .|||+|.+|..+++++++
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~------------~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~  193 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASA------------IAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQV  193 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHH------------HHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTC
T ss_pred             CcchhhhhhhhhhhhccCcceeeeeccccccccc------------cccccccccccccccccccccchhHHHHHHHHhc
Confidence            345789999999999999985 666533221111            111112110   00  179999999999999995


Q ss_pred             ----eEEEeCChhhHHHHHHHcC
Q 019991          242 ----QMQLESSPYSLLEGSMQLN  260 (332)
Q Consensus       242 ----~lmIGDs~~~DI~gA~~aG  260 (332)
                          ++||||.+ +|+.++++||
T Consensus       194 ~~~~v~~vGDg~-nD~~al~~Ag  215 (215)
T PF00702_consen  194 KPGEVAMVGDGV-NDAPALKAAG  215 (215)
T ss_dssp             TGGGEEEEESSG-GHHHHHHHSS
T ss_pred             CCCEEEEEccCH-HHHHHHHhCc
Confidence                79999997 8999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=97.41  E-value=0.00029  Score=73.38  Aligned_cols=83  Identities=16%  Similarity=0.077  Sum_probs=60.4

Q ss_pred             cccccCCCCCcccc-ccccHHHHhhhcCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHH
Q 019991            3 AKCSVQSNDPHLFQ-TLNGLRHIAETRRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTID   80 (332)
Q Consensus         3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~   80 (332)
                      +.+++-|.+-++|+ .+.+-...-+ +..+.|++|+||||++... ..+.+.++|+.|+++|++++++|..+.  ..+..
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~--~~i~~  465 (694)
T PRK14502        389 LPQMVLPDGELISRAARPSRLPSSG-QFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTM--GEQDL  465 (694)
T ss_pred             chheeCCCCCccchhhhcccCCCcC-ceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCH--HHHHH
Confidence            45666777777775 3333333334 4578999999999999654 667789999999999999999997543  34455


Q ss_pred             HHHhCCCC
Q 019991           81 KLKSLGFD   88 (332)
Q Consensus        81 ~L~~lGl~   88 (332)
                      .++.+|+.
T Consensus       466 l~~~Lgl~  473 (694)
T PRK14502        466 YRNELGIK  473 (694)
T ss_pred             HHHHcCCC
Confidence            56777765

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=97.39  E-value=8.2e-05  Score=67.23  Aligned_cols=89  Identities=15%  Similarity=0.132  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH--HHH--HH-hcCcccccCCCCHHHH----------HH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKF--EK-LGGEVRWMGKPDKLWA----------TL  234 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~--~~~--e~-~g~e~~~~GKP~p~if----------~~  234 (332)
                      ++++.++++.++++|.++ |+||+...+...-   +... +.  ..+  +. ..++....+||+|...          ..
T Consensus        76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~i---l~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~  151 (219)
T PRK09552         76 REGFHEFVQFVKENNIPFYVVSGGMDFFVYPL---LQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS  151 (219)
T ss_pred             CcCHHHHHHHHHHcCCeEEEECCCcHHHHHHH---HHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence            578899999998999995 8888766543321   1111 11  111  11 1233456678988653          46


Q ss_pred             HHHHhCC----eEEEeCChhhHHHHHHHcCCcEE
Q 019991          235 FTMILRV----QMQLESSPYSLLEGSMQLNLDLT  264 (332)
Q Consensus       235 Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti  264 (332)
                      ++++++.    .+||||+ .+|+.+|++||+..+
T Consensus       152 ~l~~~~~~~~~~i~iGDs-~~Di~aa~~Ag~~~a  184 (219)
T PRK09552        152 LIRKLSDTNDFHIVIGDS-ITDLEAAKQADKVFA  184 (219)
T ss_pred             HHHHhccCCCCEEEEeCC-HHHHHHHHHCCccee
Confidence            7777765    6999999 589999999999433

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.37  E-value=0.00011  Score=64.77  Aligned_cols=93  Identities=8%  Similarity=-0.070  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-hcCc------cc----ccCCCCHHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGE------VR----WMGKPDKLWATLFTMI  238 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~g~e------~~----~~GKP~p~if~~Al~~  238 (332)
                      |+++.++++.|+++|.++ |+||........-   +...++...+.. +..+      +.    .-.+|.+.++..++++
T Consensus        82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~---l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKV---AEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHH---HHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            577899999988899985 7888655433221   111112222211 0000      00    0012334688888999


Q ss_pred             hCC----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          239 LRV----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       239 lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      +|+    .++|||+ .+|+.+|+++|+..+...
T Consensus       159 ~~~~~~~~i~iGDs-~~D~~~a~~ag~~~a~~~  190 (201)
T TIGR01491       159 LNPSLTETVAVGDS-KNDLPMFEVADISISLGD  190 (201)
T ss_pred             hCCCHHHEEEEcCC-HhHHHHHHhcCCeEEECC
Confidence            887    6999999 589999999999776643

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02887 hydrolase family protein

Probab=97.31  E-value=0.00066  Score=70.22  Aligned_cols=65  Identities=23%  Similarity=0.308  Sum_probs=50.6

Q ss_pred             cHHHHhhhcCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           20 GLRHIAETRRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        20 ~~~~~~~~~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++...-.  +++.|++|+||||++... +-+...++|++++++|+.++++|..+  ...+...++.+|+.
T Consensus       300 ~~~~~~~--~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIATGR~--~~~i~~~l~~L~l~  365 (580)
T PLN02887        300 SLRFYKP--KFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIATGKA--RPAVIDILKMVDLA  365 (580)
T ss_pred             chhhhcc--CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHHhCcc
Confidence            3444444  799999999999999764 67888999999999999999999754  33445566777765

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.27  E-value=0.00041  Score=61.20  Aligned_cols=79  Identities=8%  Similarity=-0.011  Sum_probs=53.9

Q ss_pred             HHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChh
Q 019991          176 KILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPY  250 (332)
Q Consensus       176 ~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~  250 (332)
                      .+++.+.++|+++ |+||........   .+...++..+|        .-++|.+..+..+++++|+    .+||||+. 
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~---~l~~lgl~~~f--------~g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-  122 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVED---RMTTLGITHLY--------QGQSNKLIAFSDLLEKLAIAPEQVAYIGDDL-  122 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHH---HHHHcCCceee--------cCCCcHHHHHHHHHHHhCCCHHHEEEECCCH-
Confidence            3666677889986 788865432221   01111111111        1246778999999999998    69999995 


Q ss_pred             hHHHHHHHcCCcEEEEe
Q 019991          251 SLLEGSMQLNLDLTVME  267 (332)
Q Consensus       251 ~DI~gA~~aG~~ti~~~  267 (332)
                      .|+.+|+++|+..+ +.
T Consensus       123 ~D~~~a~~aG~~~~-v~  138 (183)
T PRK09484        123 IDWPVMEKVGLSVA-VA  138 (183)
T ss_pred             HHHHHHHHCCCeEe-cC
Confidence            89999999999854 43

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=97.26  E-value=0.00081  Score=58.72  Aligned_cols=63  Identities=22%  Similarity=0.266  Sum_probs=48.6

Q ss_pred             cCccEEEEecccee--ecCCccCcCHHHHHHHHHHCCC--eEEEEeCCC-CC---hhHHHHHH-HhCCCCcc
Q 019991           28 RRFKAWLLDQFGVL--HDGKKPYPGAISTLEMLATTGA--KMVVISNSS-RR---ASTTIDKL-KSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL--~~g~~~ipGa~e~L~~L~~~G~--~v~~vTN~s-~~---~~~~~~~L-~~lGl~~~   90 (332)
                      +.+++++||.|.||  +...++.|...+.++++++.+.  +++++|||. +.   ...-++.+ +.+|++..
T Consensus        39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl  110 (168)
T PF09419_consen   39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL  110 (168)
T ss_pred             cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE
Confidence            46999999999999  4566889999999999998876  499999985 21   22334455 56888754

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.19  E-value=0.0003  Score=61.07  Aligned_cols=86  Identities=5%  Similarity=-0.025  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cC--------------------cccccCCCCH
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GG--------------------EVRWMGKPDK  229 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~--------------------e~~~~GKP~p  229 (332)
                      +++.++++.|.++|.++ |+||........   .+...++..+|+.+ +.                    +....|.+.+
T Consensus        75 ~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~  151 (188)
T TIGR01489        75 PGFKEFIAFIKEHGIDFIVISDGNDFFIDP---VLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKG  151 (188)
T ss_pred             ccHHHHHHHHHHcCCcEEEEeCCcHHHHHH---HHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHH
Confidence            56788888888888885 778865543322   12222344455442 22                    1234566678


Q ss_pred             HHHHHHHHH-hCCeEEEeCChhhHHHHHHHcCC
Q 019991          230 LWATLFTMI-LRVQMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       230 ~if~~Al~~-lg~~lmIGDs~~~DI~gA~~aG~  261 (332)
                      .+++...+. ..-.++|||+ .+|+.+|+++++
T Consensus       152 ~~~~~~~~~~~~~~i~iGD~-~~D~~aa~~~d~  183 (188)
T TIGR01489       152 KVIHKLSEPKYQHIIYIGDG-VTDVCPAKLSDV  183 (188)
T ss_pred             HHHHHHHhhcCceEEEECCC-cchhchHhcCCc
Confidence            899998887 4457999999 589999999854

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.19  E-value=0.00072  Score=58.51  Aligned_cols=41  Identities=34%  Similarity=0.492  Sum_probs=32.9

Q ss_pred             cEEEEeccceeecCC------------ccC-cCHHHHHHHHHHCCCeEEEEeCC
Q 019991           31 KAWLLDQFGVLHDGK------------KPY-PGAISTLEMLATTGAKMVVISNS   71 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~------------~~i-pGa~e~L~~L~~~G~~v~~vTN~   71 (332)
                      +..+||+||||....            .++ |++.+.|+.|.+.|+.++++||-
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ   54 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ   54 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence            357899999998752            344 58999999999999999999994

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.18  E-value=0.00068  Score=60.90  Aligned_cols=54  Identities=33%  Similarity=0.420  Sum_probs=43.7

Q ss_pred             EEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           33 WLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        33 vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      |++|+||||.+.. .+-|...++|+.|+++|.++++.|..+  ...+...+..+++.
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~--~~~~~~~~~~~~~~   55 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRS--YSSIKRLLKELGID   55 (254)
T ss_dssp             EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSST--HHHHHHHHHHTTHC
T ss_pred             cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCc--ccccccccccccch
Confidence            6899999998854 566788899999999999999999744  34456667777776

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.17  E-value=0.00031  Score=64.36  Aligned_cols=62  Identities=21%  Similarity=0.283  Sum_probs=52.0

Q ss_pred             CccEEEEeccceeecC---------------------------CccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHH
Q 019991           29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTID   80 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g---------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~   80 (332)
                      ...+|+||+|+|+.+.                           ..++||+.++++.++++|..|+++||.+. ..+.-.+
T Consensus        71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~  150 (229)
T PF03767_consen   71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEK  150 (229)
T ss_dssp             SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHH
T ss_pred             CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHH
Confidence            6789999999997652                           26799999999999999999999999664 3456678


Q ss_pred             HHHhCCCCcc
Q 019991           81 KLKSLGFDPS   90 (332)
Q Consensus        81 ~L~~lGl~~~   90 (332)
                      .|++.|+...
T Consensus       151 nL~~~G~~~~  160 (229)
T PF03767_consen  151 NLKKAGFPGW  160 (229)
T ss_dssp             HHHHHTTSTB
T ss_pred             HHHHcCCCcc
Confidence            8999998763

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.14  E-value=0.00081  Score=59.60  Aligned_cols=40  Identities=25%  Similarity=0.469  Sum_probs=29.2

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++||+.++|+.|+++ ++++++||+.+..  ....++++|+..
T Consensus        69 ~~pg~~e~L~~L~~~-~~~~IvS~~~~~~--~~~~l~~~gl~~  108 (205)
T PRK13582         69 PLPGAVEFLDWLRER-FQVVILSDTFYEF--AGPLMRQLGWPT  108 (205)
T ss_pred             CCCCHHHHHHHHHhc-CCEEEEeCCcHHH--HHHHHHHcCCch
Confidence            478889999999988 8999999876432  334556677653

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=97.12  E-value=0.0011  Score=60.39  Aligned_cols=59  Identities=34%  Similarity=0.519  Sum_probs=50.0

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      .+..++||+.++|+.|+++|+++++.||+++..  +...|+..|+... |+.+++++++...
T Consensus        83 ~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~--~~~~L~~~gl~~~-f~~~v~~~dv~~~  141 (221)
T COG0637          83 EGLKPIPGVVELLEQLKARGIPLAVASSSPRRA--AERVLARLGLLDY-FDVIVTADDVARG  141 (221)
T ss_pred             cCCCCCccHHHHHHHHHhcCCcEEEecCChHHH--HHHHHHHccChhh-cchhccHHHHhcC
Confidence            456899999999999999999999999987543  4567889999998 7999999887764

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.12  E-value=0.0011  Score=62.05  Aligned_cols=62  Identities=19%  Similarity=0.339  Sum_probs=50.7

Q ss_pred             CccEEEEeccceee---------------------c-------CCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHH
Q 019991           29 RFKAWLLDQFGVLH---------------------D-------GKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTI   79 (332)
Q Consensus        29 ~~~~vlfDlDGvL~---------------------~-------g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~   79 (332)
                      ..++++||+|+|+.                     +       ..+++||+.++.+.+++.|.+++++||.+. ..+.-.
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~  179 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE  179 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence            46899999999987                     2       235689999999999999999999999764 334557


Q ss_pred             HHHHhCCCCcc
Q 019991           80 DKLKSLGFDPS   90 (332)
Q Consensus        80 ~~L~~lGl~~~   90 (332)
                      +-|++.|++..
T Consensus       180 ~NL~kaGy~~~  190 (275)
T TIGR01680       180 ANLKKAGYHTW  190 (275)
T ss_pred             HHHHHcCCCCc
Confidence            78899999753

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=97.11  E-value=0.0015  Score=58.14  Aligned_cols=55  Identities=25%  Similarity=0.359  Sum_probs=44.9

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|++|+++|++++++||+++..  +...++++|+... |+.++++.+
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~--~~~~l~~~~l~~~-f~~i~~~~~  126 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPR--ARSLLEALGLLPL-FDHVIGSDE  126 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCchHH--HHHHHHHcCChhh-eeeEEecCc
Confidence            356889999999999999999999999986543  4567889999877 677777644

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=97.11  E-value=0.0012  Score=55.79  Aligned_cols=55  Identities=36%  Similarity=0.583  Sum_probs=46.1

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|++.|++++++||++.  +.+...++++|+... |+.++++.+
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~--~~~~~~l~~~~~~~~-f~~i~~~~~  128 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSR--ERIERVLERLGLDDY-FDEIISSDD  128 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEH--HHHHHHHHHTTHGGG-CSEEEEGGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCc--ccccccccccccccc-cccccccch
Confidence            5668999999999999999999999999853  446678899999976 688887763

...

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.09  E-value=0.0012  Score=60.49  Aligned_cols=62  Identities=21%  Similarity=0.372  Sum_probs=50.9

Q ss_pred             CccEEEEeccceeecC---------------------------CccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHH
Q 019991           29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTID   80 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g---------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~   80 (332)
                      ..++++||+|.|+.+.                           .+++||+.++++.++++|..++++||.+. ..+...+
T Consensus        76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~  155 (229)
T TIGR01675        76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLD  155 (229)
T ss_pred             CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence            5789999999997762                           26789999999999999999999999764 3344567


Q ss_pred             HHHhCCCCcc
Q 019991           81 KLKSLGFDPS   90 (332)
Q Consensus        81 ~L~~lGl~~~   90 (332)
                      .|++.|++..
T Consensus       156 nL~~~G~~~~  165 (229)
T TIGR01675       156 NLINAGFTGW  165 (229)
T ss_pred             HHHHcCCCCc
Confidence            8889998853

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=97.09  E-value=0.0011  Score=61.17  Aligned_cols=55  Identities=22%  Similarity=0.306  Sum_probs=46.4

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ...++||+.++|++|+++|++++++||+++.  .+...|+++|+... |+.+++++++
T Consensus       106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~--~~~~~l~~~gl~~~-Fd~iv~~~~~  160 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRE--NAELMISLLGLSDF-FQAVIIGSEC  160 (248)
T ss_pred             cCCcCccHHHHHHHHHHcCCeEEEEeCCCHH--HHHHHHHHcCChhh-CcEEEecCcC
Confidence            4578999999999999999999999998753  35567889999887 7888888754

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=96.97  E-value=0.00088  Score=59.14  Aligned_cols=56  Identities=21%  Similarity=0.360  Sum_probs=46.0

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ....++||+.++|++|+++|++++++||++.  ..+...++++|+... |+.+++++++
T Consensus        89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~--~~~~~~l~~~gl~~~-fd~i~~s~~~  144 (198)
T TIGR01428        89 LRLPPHPDVPAGLRALKERGYRLAILSNGSP--AMLKSLVKHAGLDDP-FDAVLSADAV  144 (198)
T ss_pred             hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCH--HHHHHHHHHCCChhh-hheeEehhhc
Confidence            3457899999999999999999999999764  335567889999877 6888888653

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=96.92  E-value=0.0023  Score=57.70  Aligned_cols=55  Identities=16%  Similarity=0.224  Sum_probs=44.6

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|+++|++++++||+++..  ....++++|+... |+.++++++
T Consensus        89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~--~~~~l~~~~l~~~-f~~~~~~~~  143 (222)
T PRK10826         89 ETRPLLPGVREALALCKAQGLKIGLASASPLHM--LEAVLTMFDLRDY-FDALASAEK  143 (222)
T ss_pred             cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHH--HHHHHHhCcchhc-ccEEEEccc
Confidence            356899999999999999999999999976532  4456788999887 677777643

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=96.92  E-value=0.0022  Score=56.11  Aligned_cols=58  Identities=26%  Similarity=0.220  Sum_probs=39.1

Q ss_pred             ccEEEEeccceeecCC--------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHH
Q 019991           30 FKAWLLDQFGVLHDGK--------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLK   83 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~--------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~   83 (332)
                      .+.++||+|+|||.-.                          .++|++.++|+.|+++|++++++|.+..+ +-..+.|+
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P-~~A~~~L~   81 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP-DWARELLK   81 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H-HHHHHHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh-HHHHHHHH
Confidence            5799999999999621                          57999999999999999999999965442 33456778


Q ss_pred             hCCCC
Q 019991           84 SLGFD   88 (332)
Q Consensus        84 ~lGl~   88 (332)
                      .+++.
T Consensus        82 ~l~i~   86 (169)
T PF12689_consen   82 LLEID   86 (169)
T ss_dssp             HTT-C
T ss_pred             hcCCC
Confidence            88888

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.92  E-value=0.00064  Score=58.82  Aligned_cols=96  Identities=10%  Similarity=0.036  Sum_probs=59.1

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCcccee--ccceecCCChhHHHHHHhcC--------cccccCCCCHHHHHHHH
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVE--ARALRVMPGTLASKFEKLGG--------EVRWMGKPDKLWATLFT  236 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~--~~~~~l~~G~i~~~~e~~g~--------e~~~~GKP~p~if~~Al  236 (332)
                      .+-++++.++|+.+.+.|..+ |+||.......  .....-...-+...++..+.        ......||++-|++.++
T Consensus        28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~  107 (159)
T PF08645_consen   28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFAL  107 (159)
T ss_dssp             EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred             hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHH
Confidence            445567899999998999885 88997765431  11000000112223332222        12367899999999999


Q ss_pred             HHhCC--------eEEEeCC----------hhhHHHHHHHcCCcE
Q 019991          237 MILRV--------QMQLESS----------PYSLLEGSMQLNLDL  263 (332)
Q Consensus       237 ~~lg~--------~lmIGDs----------~~~DI~gA~~aG~~t  263 (332)
                      +.++.        .+||||+          -.+|...|.++|++.
T Consensus       108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen  108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             HhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence            98753        5899995          257999999999974

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=96.90  E-value=0.0023  Score=57.23  Aligned_cols=53  Identities=28%  Similarity=0.335  Sum_probs=43.9

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ..++||+.++|++|+++|++++++||+++.  .+...|+.+|+... |+.++++.+
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~--~~~~~l~~~gl~~~-f~~i~~~~~  133 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRD--TVEMGLKLTGLDEF-FDVVITLDD  133 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHcCChhc-eeEEEecCc
Confidence            368999999999999999999999998743  35577899999887 677877543

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=96.86  E-value=0.0021  Score=55.43  Aligned_cols=40  Identities=20%  Similarity=0.291  Sum_probs=37.0

Q ss_pred             EEEeccceeecCC------------ccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           33 WLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        33 vlfDlDGvL~~g~------------~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |++|+||||..++            ...||+.++...+.++|+++.++|..+
T Consensus         2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp   53 (157)
T PF08235_consen    2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARP   53 (157)
T ss_pred             EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCc
Confidence            7999999999985            577999999999999999999999876

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=96.82  E-value=0.0033  Score=55.84  Aligned_cols=54  Identities=22%  Similarity=0.324  Sum_probs=43.7

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|+.|+++|++++++||+++.  .....++++|+... |+.++++++
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~--~~~~~l~~~~l~~~-f~~~~~~~~  136 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTP--LARPLLELLGLAKY-FSVLIGGDS  136 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHcCcHhh-CcEEEecCC
Confidence            3578999999999999999999999997643  35567888999877 677776643

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=96.82  E-value=0.00056  Score=61.59  Aligned_cols=90  Identities=12%  Similarity=0.084  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC-ChhHHHHH--H-hcCcccccCCCCHHHH----------HHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP-GTLASKFE--K-LGGEVRWMGKPDKLWA----------TLF  235 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~-G~i~~~~e--~-~g~e~~~~GKP~p~if----------~~A  235 (332)
                      ++++.++++.+.++|.++ |+|++...+...-   +.. +.....+.  . .+......+||+|..+          ..+
T Consensus        72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~i---l~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~  148 (214)
T TIGR03333        72 REGFREFVAFINEHGIPFYVISGGMDFFVYPL---LEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL  148 (214)
T ss_pred             cccHHHHHHHHHHCCCeEEEECCCcHHHHHHH---HHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence            477889999988889985 7777654433211   110 11111111  1 1233456678988776          255


Q ss_pred             HHHhCC----eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          236 TMILRV----QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       236 l~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      +++++.    .+||||+ .+|+.+|++||+  ++.
T Consensus       149 l~~~~~~~~~~i~iGDg-~~D~~~a~~Ad~--~~a  180 (214)
T TIGR03333       149 IRKLSEPNDYHIVIGDS-VTDVEAAKQSDL--CFA  180 (214)
T ss_pred             HHHHhhcCCcEEEEeCC-HHHHHHHHhCCe--eEe
Confidence            665543    6999999 589999999998  444

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=96.76  E-value=0.0013  Score=58.92  Aligned_cols=54  Identities=31%  Similarity=0.433  Sum_probs=44.7

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|++|+++|++++++||+++.  .....++++|+... |+.++++++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~--~~~~~l~~~~l~~~-f~~i~~~~~  145 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPV--KQWEKLERLGVRDF-FDAVITSEE  145 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHhCChHHh-ccEEEEecc
Confidence            3478999999999999999999999998643  24567889999887 688887754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=96.73  E-value=0.0053  Score=52.88  Aligned_cols=51  Identities=35%  Similarity=0.522  Sum_probs=40.5

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..++||+.++|+.|++.|++++++||++...   ...+.++|+... |+.++++.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~---~~~~~~~~l~~~-f~~i~~~~  134 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH---AVLVQELGLRDL-FDVVIFSG  134 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHhcCCHHH-CCEEEEcC
Confidence            5789999999999999999999999987543   233445888876 67777654

HAD subfamilies caused by an overly broad single model.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=96.69  E-value=0.0014  Score=59.59  Aligned_cols=56  Identities=16%  Similarity=0.266  Sum_probs=45.4

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ....++||+.++|+.|+++|++++++||+++..  +...++++|+... |+.++++++.
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~--~~~~l~~~~l~~~-fd~iv~s~~~  145 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHN--LAVKLEHTGLDAH-LDLLLSTHTF  145 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHH--HHHHHHHCCcHHH-CCEEEEeeeC
Confidence            345789999999999999999999999986533  4456888999877 6888877643

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=96.69  E-value=0.0037  Score=56.41  Aligned_cols=41  Identities=12%  Similarity=0.105  Sum_probs=31.9

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l   85 (332)
                      ....++||+.++|++|+++|++++++||+.+..  +...|+++
T Consensus        71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~--i~~il~~~  111 (219)
T PRK09552         71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFF--VYPLLQGL  111 (219)
T ss_pred             hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHH--HHHHHHHh
Confidence            345789999999999999999999999986532  33445555

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=96.67  E-value=0.0034  Score=61.76  Aligned_cols=53  Identities=17%  Similarity=0.305  Sum_probs=44.8

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .++||+.++|+.|+++|++++++||+++.  .+...|+++|+... |+.++++.++
T Consensus       216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~--~~~~~L~~lgL~~y-Fd~Iv~sddv  268 (381)
T PLN02575        216 RLRTGSQEFVNVLMNYKIPMALVSTRPRK--TLENAIGSIGIRGF-FSVIVAAEDV  268 (381)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHcCCHHH-ceEEEecCcC
Confidence            46899999999999999999999998743  35567889999888 7888887764

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.66  E-value=0.0023  Score=56.76  Aligned_cols=41  Identities=32%  Similarity=0.448  Sum_probs=36.3

Q ss_pred             EEEeccceeecCC--ccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           33 WLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        33 vlfDlDGvL~~g~--~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      +++|+||||.+..  ++-+.+.++|+.|++.|.+++++|+.+.
T Consensus         2 i~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~   44 (204)
T TIGR01484         2 LFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVTGRSL   44 (204)
T ss_pred             EEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCH
Confidence            7899999999864  5778899999999999999999998664

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK11587 putative phosphatase; Provisional

Probab=96.64  E-value=0.0092  Score=53.66  Aligned_cols=54  Identities=22%  Similarity=0.337  Sum_probs=41.6

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|+++|++++++||+++..  ....++..|+..  ++.++++++
T Consensus        80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~--~~~~l~~~~l~~--~~~i~~~~~  133 (218)
T PRK11587         80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPV--ASARHKAAGLPA--PEVFVTAER  133 (218)
T ss_pred             cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchH--HHHHHHhcCCCC--ccEEEEHHH
Confidence            355789999999999999999999999987542  345677888853  356666654

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=96.60  E-value=0.0058  Score=52.93  Aligned_cols=52  Identities=25%  Similarity=0.332  Sum_probs=42.9

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|+.|++.|++++++||+    ......|+++|+... |+.++++.+
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~----~~~~~~l~~~~l~~~-f~~v~~~~~  137 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS----KNADRILAKLGLTDY-FDAIVDADE  137 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc----hhHHHHHHHcChHHH-CCEeeehhh
Confidence            4689999999999999999999999997    234567888999877 677777653

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.57  E-value=0.0036  Score=58.60  Aligned_cols=55  Identities=24%  Similarity=0.253  Sum_probs=41.8

Q ss_pred             ccEEEEeccceeec------CCccCcCHHHHHHHHHH-CCCeEEEEeCCCCChhHHHHHHHhCC
Q 019991           30 FKAWLLDQFGVLHD------GKKPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLG   86 (332)
Q Consensus        30 ~~~vlfDlDGvL~~------g~~~ipGa~e~L~~L~~-~G~~v~~vTN~s~~~~~~~~~L~~lG   86 (332)
                      -..+++|+||||.+      ...+-|...+.|+.|.+ .|.+++++|..+  ...+.+.++.++
T Consensus        14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~--~~~~~~~~~~~~   75 (266)
T PRK10187         14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRS--MVELDALAKPYR   75 (266)
T ss_pred             CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHhcCccc
Confidence            35899999999998      34677899999999998 799999999754  333444444443

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=96.55  E-value=0.0026  Score=59.38  Aligned_cols=55  Identities=16%  Similarity=0.271  Sum_probs=45.3

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ...++||+.++|+.|+++|++++++||+++.  .+...++++|+... |+.++++.++
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~--~~~~~l~~~gl~~~-Fd~ii~~~d~  161 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTRPRR--YLERAIEAVGMEGF-FSVVLAAEDV  161 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCcCHH--HHHHHHHHcCCHhh-CcEEEecccC
Confidence            3568999999999999999999999998753  24567888999887 6888887643

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=96.51  E-value=0.0063  Score=52.72  Aligned_cols=53  Identities=23%  Similarity=0.322  Sum_probs=42.8

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ...++||+.++|++|+++|++++++||+..    ....|+++|+... |+.++++.+.
T Consensus        85 ~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~----~~~~l~~~~l~~~-f~~~~~~~~~  137 (185)
T TIGR01990        85 PADVLPGIKNLLDDLKKNNIKIALASASKN----APTVLEKLGLIDY-FDAIVDPAEI  137 (185)
T ss_pred             CcccCccHHHHHHHHHHCCCeEEEEeCCcc----HHHHHHhcCcHhh-CcEEEehhhc
Confidence            347899999999999999999999998643    1246889999877 6888877643

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=96.48  E-value=0.0048  Score=56.11  Aligned_cols=51  Identities=20%  Similarity=0.254  Sum_probs=40.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      .++||+.++|++|+++|++++++||++..  .....++++|+... |+.++++.
T Consensus        95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~--~~~~~l~~~~l~~~-f~~i~~~~  145 (229)
T PRK13226         95 QLFDGVEGMLQRLECAGCVWGIVTNKPEY--LARLILPQLGWEQR-CAVLIGGD  145 (229)
T ss_pred             eeCCCHHHHHHHHHHCCCeEEEECCCCHH--HHHHHHHHcCchhc-ccEEEecC
Confidence            57999999999999999999999998653  23456788998876 56666554

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=96.46  E-value=0.008  Score=56.50  Aligned_cols=53  Identities=19%  Similarity=0.281  Sum_probs=42.9

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      ...+++||+.++|+.|+++|++++++||+++.  .+...|+++|+... |+.++++
T Consensus       139 ~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~--~~~~~L~~~gl~~~-F~~vi~~  191 (273)
T PRK13225        139 PALQLFPGVADLLAQLRSRSLCLGILSSNSRQ--NIEAFLQRQGLRSL-FSVVQAG  191 (273)
T ss_pred             ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHcCChhh-eEEEEec
Confidence            34578999999999999999999999998653  35567889999877 5666554

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=96.38  E-value=0.0041  Score=55.74  Aligned_cols=54  Identities=19%  Similarity=0.370  Sum_probs=44.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC--ccccccccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD--PSLFAGAITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~--~~~f~~Iits~~v  101 (332)
                      .+++||+.++|+.|+++|++++++||++...  ....|+++|+.  .. |+.++++++.
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~--~~~~l~~~~l~~~~~-f~~i~~~~~~  141 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDT--AERLLEKLGWTVGDD-VDAVVCPSDV  141 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHH--HHHHHHHhhhhhhcc-CCEEEcCCcC
Confidence            4799999999999999999999999987543  44677888987  65 6778887653

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=96.36  E-value=0.0087  Score=60.28  Aligned_cols=54  Identities=9%  Similarity=0.145  Sum_probs=44.4

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ..++||+.++|++|+++|++++++||+++..  ....++++|+... |+.+++++++
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~--~~~~l~~~~l~~~-f~~i~~~d~v  382 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEY--LRAIVSYYDLDQW-VTETFSIEQI  382 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHH--HHHHHHHCCcHhh-cceeEecCCC
Confidence            4689999999999999999999999987533  4567889999877 6777776543

>PLN02940 riboflavin kinase

Probab=96.36  E-value=0.0073  Score=59.51  Aligned_cols=56  Identities=29%  Similarity=0.402  Sum_probs=44.7

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHH-hCCCCccccccccccHHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLK-SLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~-~lGl~~~~f~~Iits~~v  101 (332)
                      ....++||+.++|+.|+++|++++++||+++..  +...++ ..|+... |+.+++++++
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~--~~~~l~~~~gl~~~-Fd~ii~~d~v  146 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHGVPMALASNSPRAN--IEAKISCHQGWKES-FSVIVGGDEV  146 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHH--HHHHHHhccChHhh-CCEEEehhhc
Confidence            345789999999999999999999999986533  345666 6888877 6888887764

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=96.31  E-value=0.0047  Score=54.64  Aligned_cols=51  Identities=37%  Similarity=0.393  Sum_probs=42.7

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|++|++.|++++++||++..   +...++++|+... |+.++++.+
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~---~~~~l~~~~l~~~-fd~i~~s~~  155 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR---LRGLLEALGLLEY-FDFVVTSYE  155 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh---HHHHHHHCCcHHh-cceEEeecc
Confidence            68999999999999999999999997542   3467888999877 688887764

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PLN02423 phosphomannomutase

Probab=96.28  E-value=0.0074  Score=55.72  Aligned_cols=42  Identities=19%  Similarity=0.221  Sum_probs=34.4

Q ss_pred             CccEEE-EeccceeecCCccC-cCHHHHHHHHHHCCCeEEEEeCC
Q 019991           29 RFKAWL-LDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNS   71 (332)
Q Consensus        29 ~~~~vl-fDlDGvL~~g~~~i-pGa~e~L~~L~~~G~~v~~vTN~   71 (332)
                      +++.++ ||+||||.++...+ |...++|++|++. ++++++|..
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaTGR   48 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVGGS   48 (245)
T ss_pred             ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEECCc
Confidence            566555 99999999988644 5668999999976 999999975

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.27  E-value=0.017  Score=49.45  Aligned_cols=93  Identities=16%  Similarity=0.025  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHh---CCCcEEEecCCccceeccceecCCChhHHHHHH-hcCccc--ccCCC--CHHHHHHHHHHhCC--
Q 019991          172 QDLEKILEICAS---KKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVR--WMGKP--DKLWATLFTMILRV--  241 (332)
Q Consensus       172 ~~l~~~l~~l~~---~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~-~g~e~~--~~GKP--~p~if~~Al~~lg~--  241 (332)
                      +.+..-++.++.   +...++.+|+.......     ..++.++.++. +|-...  ..-||  ..+.+++....--+  
T Consensus        64 p~~l~~ie~~~~vygek~i~v~SNsaG~~~~D-----~d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~  138 (190)
T KOG2961|consen   64 PPLLPSIERCKAVYGEKDIAVFSNSAGLTEYD-----HDDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCT  138 (190)
T ss_pred             chhHHHHHHHHHHhCcccEEEEecCcCccccC-----CchHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCC
Confidence            334444444433   23345778865542221     24678889988 455443  34466  44555555442223  


Q ss_pred             ---eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 ---QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 ---~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                         .+||||++.|||..|+..|--++|++..
T Consensus       139 ~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g  169 (190)
T KOG2961|consen  139 SSELIMVGDRLFTDIVYANRMGSLGVWTEPG  169 (190)
T ss_pred             hhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence               4899999999999999999999999753

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=96.22  E-value=0.008  Score=53.16  Aligned_cols=91  Identities=10%  Similarity=0.031  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-h-c-CcccccC--CCCHHHHHHHHHHhC---C
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-G-GEVRWMG--KPDKLWATLFTMILR---V  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~-g-~e~~~~G--KP~p~if~~Al~~lg---~  241 (332)
                      |+++.++++.+.++ .++ |+||+.......   .+...++..+|.. + . .+....|  +|.|.....++++++   .
T Consensus        70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~  145 (205)
T PRK13582         70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGP---LMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY  145 (205)
T ss_pred             CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHH---HHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence            57788999988777 775 788877654432   1233334444443 1 1 1111111  222222334444433   2


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                       .+||||+ .+|+.+|+++|+.. +++
T Consensus       146 ~~v~iGDs-~~D~~~~~aa~~~v-~~~  170 (205)
T PRK13582        146 RVIAAGDS-YNDTTMLGEADAGI-LFR  170 (205)
T ss_pred             eEEEEeCC-HHHHHHHHhCCCCE-EEC
Confidence             6999999 58999999999844 443

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=96.20  E-value=0.0042  Score=55.34  Aligned_cols=56  Identities=18%  Similarity=0.210  Sum_probs=40.5

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|+.|+++|++++++||++.........+...|+... |+.++++.+
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd~v~~s~~  147 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FDAVVESCL  147 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CCEEEEeee
Confidence            35689999999999999999999999987533222233445566655 677776643

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=96.20  E-value=0.0038  Score=57.41  Aligned_cols=56  Identities=16%  Similarity=0.185  Sum_probs=43.3

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|+++|++++++||+++.  .....|+++|+....++.++++++
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~--~~~~~l~~~gl~~~f~d~ii~~~~  151 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTRE--MMDVVAPEAALQGYRPDYNVTTDD  151 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCCCeEEEECCCcHH--HHHHHHHHHHhcCCCCceEEcccc
Confidence            35678999999999999999999999997643  344567788887652266777654

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=96.18  E-value=0.011  Score=54.20  Aligned_cols=62  Identities=34%  Similarity=0.462  Sum_probs=52.2

Q ss_pred             CccEEEEeccceeecC---------------------------CccCcCHHHHHHHHHHCCCeEEEEeCCCCCh--hHHH
Q 019991           29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRRA--STTI   79 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g---------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~--~~~~   79 (332)
                      +..+|+.|+|-|+.+.                           ..++|||.||+++..+.|..+.++||.....  ..-.
T Consensus        78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~  157 (274)
T COG2503          78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI  157 (274)
T ss_pred             CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence            3459999999999874                           2678999999999999999999999977533  4567


Q ss_pred             HHHHhCCCCcc
Q 019991           80 DKLKSLGFDPS   90 (332)
Q Consensus        80 ~~L~~lGl~~~   90 (332)
                      +.|.+.|++..
T Consensus       158 ~nLk~~g~~~~  168 (274)
T COG2503         158 ENLKSEGLPQV  168 (274)
T ss_pred             HHHHHcCcccc
Confidence            88999999865

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.15  E-value=0.011  Score=50.92  Aligned_cols=39  Identities=18%  Similarity=0.023  Sum_probs=29.4

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      +.||+.++|+.|.+. ++++++||+++...  ...++.++..
T Consensus        59 ~rPgv~efL~~l~~~-yel~I~T~~~~~yA--~~vl~~ldp~   97 (156)
T TIGR02250        59 LRPFLHEFLKEASKL-YEMHVYTMGTRAYA--QAIAKLIDPD   97 (156)
T ss_pred             ECCCHHHHHHHHHhh-cEEEEEeCCcHHHH--HHHHHHhCcC
Confidence            479999999999955 99999999876432  2345666655

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.08  E-value=0.015  Score=52.61  Aligned_cols=60  Identities=22%  Similarity=0.176  Sum_probs=46.5

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ....++.|+||||.....-...|.+.+..|++.|++++++|+.++  .++...-+.+|++..
T Consensus         6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~SSKT~--aE~~~l~~~l~v~~~   65 (274)
T COG3769           6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCSSKTR--AEMLYLQKSLGVQGL   65 (274)
T ss_pred             cceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEeccchH--HHHHHHHHhcCCCCC
Confidence            356899999999999666677888999999999999999997654  333333356777743

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=96.06  E-value=0.013  Score=51.41  Aligned_cols=47  Identities=15%  Similarity=0.010  Sum_probs=36.9

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      +....++||+.++|+.|+++|++++++||+...  .+...++.+|+...
T Consensus        76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~--~~~~~l~~~g~~~~  122 (201)
T TIGR01491        76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIMC--LAKKVAEKLNPDYV  122 (201)
T ss_pred             HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHH--HHHHHHHHhCCCeE
Confidence            345579999999999999999999999997643  23455677887643

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=96.05  E-value=0.025  Score=50.57  Aligned_cols=53  Identities=28%  Similarity=0.462  Sum_probs=42.0

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++++.|++.|++++++||+...  .....++++|+... |+.++++.
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~--~~~~~l~~~~l~~~-f~~~~~~~  143 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTP--FVAPLLEALGIADY-FSVVIGGD  143 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHcCCccC-ccEEEcCC
Confidence            4578999999999999999999999998643  24467788898776 56666543

>PRK09449 dUMP phosphatase; Provisional

Probab=96.02  E-value=0.0051  Score=55.28  Aligned_cols=53  Identities=26%  Similarity=0.365  Sum_probs=42.9

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ..++||+.++|+.|+ .|++++++||++..  .....|+++|+... |+.++++.++
T Consensus        94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~--~~~~~l~~~~l~~~-fd~v~~~~~~  146 (224)
T PRK09449         94 CTPLPGAVELLNALR-GKVKMGIITNGFTE--LQQVRLERTGLRDY-FDLLVISEQV  146 (224)
T ss_pred             CccCccHHHHHHHHH-hCCeEEEEeCCcHH--HHHHHHHhCChHHH-cCEEEEECcc
Confidence            468999999999999 68999999997643  34467889999887 6888887543

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.97  E-value=0.015  Score=50.39  Aligned_cols=64  Identities=17%  Similarity=0.100  Sum_probs=44.7

Q ss_pred             cEEEEeccceeecCCc-------------------------cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC
Q 019991           31 KAWLLDQFGVLHDGKK-------------------------PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~~-------------------------~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l   85 (332)
                      ..+++|+|+||..+..                         .-||+.|+|+.|.+. +.+++.|++++..  ....++.+
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~y--A~~il~~l   78 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEY--ADPVLDIL   78 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHH--HHHHHHHH
Confidence            4788999999986541                         458999999999987 9999999987543  22345666


Q ss_pred             CCCccccccccc
Q 019991           86 GFDPSLFAGAIT   97 (332)
Q Consensus        86 Gl~~~~f~~Iit   97 (332)
                      +.....++.++.
T Consensus        79 dp~~~~f~~~l~   90 (162)
T TIGR02251        79 DRGGKVISRRLY   90 (162)
T ss_pred             CcCCCEEeEEEE
Confidence            654411344443

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=95.93  E-value=0.0097  Score=52.50  Aligned_cols=92  Identities=9%  Similarity=-0.018  Sum_probs=59.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH---------h-cC--cccccCCCCHHHHHHHH
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK---------L-GG--EVRWMGKPDKLWATLFT  236 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~---------~-g~--e~~~~GKP~p~if~~Al  236 (332)
                      .++++.+.++.++++|.++ |+||+...+...-   ....++...+..         . |.  .+...|++....++..+
T Consensus        88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~---~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~  164 (202)
T TIGR01490        88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPL---ARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL  164 (202)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH---HHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence            4588899999888889885 7777655433211   111112222211         1 11  12345677788888888


Q ss_pred             HHhCC----eEEEeCChhhHHHHHHHcCCcEEE
Q 019991          237 MILRV----QMQLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       237 ~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      ++.++    .+++||+. +|+..++.+|...+.
T Consensus       165 ~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v  196 (202)
T TIGR01490       165 AEEQIDLKDSYAYGDSI-SDLPLLSLVGHPYVV  196 (202)
T ss_pred             HHcCCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence            88886    58999995 899999999976644

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=95.90  E-value=0.013  Score=52.97  Aligned_cols=49  Identities=27%  Similarity=0.419  Sum_probs=41.8

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iit   97 (332)
                      .++||+.++|+.|+++|++.+++||+++..  ....|+++|+... |+.+++
T Consensus        89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~--~~~~l~~~gl~~~-F~~i~g  137 (220)
T COG0546          89 RLFPGVKELLAALKSAGYKLGIVTNKPERE--LDILLKALGLADY-FDVIVG  137 (220)
T ss_pred             ccCCCHHHHHHHHHhCCCeEEEEeCCcHHH--HHHHHHHhCCccc-cceEEc
Confidence            579999999999999999999999987543  4466788999998 777777

>PRK08238 hypothetical protein; Validated

Probab=95.88  E-value=0.012  Score=59.71  Aligned_cols=39  Identities=21%  Similarity=0.249  Sum_probs=31.3

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCC
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl   87 (332)
                      +.||+.+.+++++++|++++++||+++..  ....++++|+
T Consensus        73 ~~pga~e~L~~lk~~G~~v~LaTas~~~~--a~~i~~~lGl  111 (479)
T PRK08238         73 YNEEVLDYLRAERAAGRKLVLATASDERL--AQAVAAHLGL  111 (479)
T ss_pred             CChhHHHHHHHHHHCCCEEEEEeCCCHHH--HHHHHHHcCC
Confidence            56899999999999999999999986532  3345577786

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=95.76  E-value=0.007  Score=51.66  Aligned_cols=52  Identities=29%  Similarity=0.358  Sum_probs=36.5

Q ss_pred             cEEEEeccceeecCCc--------------------cCcCHHHHHHHHHHCCCeEEEEeCCCCC-hhHHHHHHH
Q 019991           31 KAWLLDQFGVLHDGKK--------------------PYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK   83 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~~--------------------~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~~~~~~L~   83 (332)
                      +++++|+||||+....                    .-||+.+||+++.+ .+.+++.|.++.. .+.+.+.|.
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~ld   73 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDALD   73 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHHT
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhhh
Confidence            4789999999998663                    57999999999954 5999999998743 334444443

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=95.75  E-value=0.028  Score=51.86  Aligned_cols=68  Identities=12%  Similarity=0.081  Sum_probs=51.4

Q ss_pred             EEEEeccceeecCCcc---------------------------------CcC--HHHHHHHHHHCCCeEEEEeCCCCC-h
Q 019991           32 AWLLDQFGVLHDGKKP---------------------------------YPG--AISTLEMLATTGAKMVVISNSSRR-A   75 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~---------------------------------ipG--a~e~L~~L~~~G~~v~~vTN~s~~-~   75 (332)
                      +|+||+||||.++...                                 .|+  +.++|++++++|++++++||++.. .
T Consensus        65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~  144 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT  144 (237)
T ss_pred             EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence            9999999999987651                                 222  889999999999999999998542 3


Q ss_pred             hHHHH-HHHhCCCCccccccccccHH
Q 019991           76 STTID-KLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        76 ~~~~~-~L~~lGl~~~~f~~Iits~~  100 (332)
                      +...+ .++++|++.. |+.+++++.
T Consensus       145 ~~~a~~ll~~lGi~~~-f~~i~~~d~  169 (237)
T TIGR01672       145 DTVSKTLAKNFHIPAM-NPVIFAGDK  169 (237)
T ss_pred             HHHHHHHHHHhCCchh-eeEEECCCC
Confidence            33444 4567999876 566666543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=95.74  E-value=0.022  Score=47.57  Aligned_cols=63  Identities=21%  Similarity=0.245  Sum_probs=47.7

Q ss_pred             cEEEEeccceeecCC-------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC
Q 019991           31 KAWLLDQFGVLHDGK-------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~-------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l   85 (332)
                      .++.||+|||+|+..                         .++|.+.+++++++.+|+-+..+|=|  ......+.|+.+
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN--~~~kA~~aLral   78 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN--FEDKAIKALRAL   78 (164)
T ss_pred             CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC--chHHHHHHHHHh
Confidence            378999999999842                         56888999999999999866655533  334456789999


Q ss_pred             CCCcccccccc
Q 019991           86 GFDPSLFAGAI   96 (332)
Q Consensus        86 Gl~~~~f~~Ii   96 (332)
                      |+... |+-++
T Consensus        79 ~~~~y-Fhy~V   88 (164)
T COG4996          79 DLLQY-FHYIV   88 (164)
T ss_pred             chhhh-EEEEE
Confidence            99887 55433

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=95.69  E-value=0.012  Score=55.17  Aligned_cols=74  Identities=22%  Similarity=0.263  Sum_probs=60.9

Q ss_pred             CccEEEEeccceeecCCc----cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~----~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      ....++||+|-||.....    .-|.+.+.+..|++.|--+++.|-+++  +-+...|++++++.. |+.+++.|..+.+
T Consensus       121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~--eHV~~sl~~~~L~~~-Fd~ii~~G~~~~~  197 (297)
T PF05152_consen  121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNR--EHVRHSLKELKLEGY-FDIIICGGNKAGE  197 (297)
T ss_pred             CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCH--HHHHHHHHHhCCccc-cEEEEeCCccCCc
Confidence            567999999999998764    458889999999999999999987654  346678999999987 8888888766654


Q ss_pred             H
Q 019991          105 Y  105 (332)
Q Consensus       105 ~  105 (332)
                      +
T Consensus       198 ~  198 (297)
T PF05152_consen  198 Y  198 (297)
T ss_pred             C
Confidence            4

>PRK08238 hypothetical protein; Validated

Probab=95.60  E-value=0.022  Score=57.81  Aligned_cols=91  Identities=10%  Similarity=-0.089  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEEeC
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQLES  247 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmIGD  247 (332)
                      +++.+.++.++++|.++ ++||++......-   ....++   |+.+ +.+.....||++.. +.+.+.++.  ..++||
T Consensus        75 pga~e~L~~lk~~G~~v~LaTas~~~~a~~i---~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~~~~~~yvGD  147 (479)
T PRK08238         75 EEVLDYLRAERAAGRKLVLATASDERLAQAV---AAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFGERGFDYAGN  147 (479)
T ss_pred             hhHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhCccCeeEecC
Confidence            78899999989999985 8898877654421   122222   5554 55555555555432 233355554  489999


Q ss_pred             ChhhHHHHHHHcCCcEEEEecchh
Q 019991          248 SPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       248 s~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      + .+|+..++.+| +.+.+|...+
T Consensus       148 S-~~Dlp~~~~A~-~av~Vn~~~~  169 (479)
T PRK08238        148 S-AADLPVWAAAR-RAIVVGASPG  169 (479)
T ss_pred             C-HHHHHHHHhCC-CeEEECCCHH
Confidence            9 58999999999 8888875543

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=95.55  E-value=0.032  Score=52.25  Aligned_cols=52  Identities=27%  Similarity=0.386  Sum_probs=41.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..++||+.++|+.|+++|++++++||++..  .+...++++|+... |+.++++.
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~--~~~~~l~~~~i~~~-f~~i~~~d  151 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPER--FVAPLLDQMKIGRY-FRWIIGGD  151 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHH--HHHHHHHHcCcHhh-CeEEEecC
Confidence            467999999999999999999999997653  24456778888766 56666654

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=95.54  E-value=0.013  Score=54.41  Aligned_cols=55  Identities=15%  Similarity=0.154  Sum_probs=40.5

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|+.|+++|++++++||+++..  ....++.+|+....++.++++++
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~--~~~~l~~~~l~~~~~d~i~~~~~  153 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREM--MDVVVPLAAAQGYRPDHVVTTDD  153 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHH--HHHHHHHHhhcCCCceEEEcCCc
Confidence            45789999999999999999999999987532  34556666665441256666654

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=95.38  E-value=0.015  Score=51.42  Aligned_cols=53  Identities=17%  Similarity=0.185  Sum_probs=42.7

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .+.+++.++|+.|++.|++++++||+++.  .....|+.+|+... |+.++++.++
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~--~~~~~l~~~gl~~~-f~~~~~~~~~  158 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRK--DAAKFLTTHGLEIL-FPVQIWMEDC  158 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHH--HHHHHHHHcCchhh-CCEEEeecCC
Confidence            46677899999999999999999998643  35567899999877 6777776653

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=95.33  E-value=0.028  Score=49.49  Aligned_cols=86  Identities=19%  Similarity=0.200  Sum_probs=53.8

Q ss_pred             ccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccc-ccccc-ccHH-HHHHHHhhcCChh
Q 019991           37 QFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL-FAGAI-TSGE-LTHQYLLRRDDAW  113 (332)
Q Consensus        37 lDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~-f~~Ii-ts~~-v~~~~L~~~~~~~  113 (332)
                      .-|.+....++.||+.++|+.|++.|+++.++|+....  ......+.+|+.... |.... +|.. .....+++...+ 
T Consensus       118 ~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~--~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~-  194 (215)
T PF00702_consen  118 FLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNES--TASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVK-  194 (215)
T ss_dssp             EEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHH--HHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCT-
T ss_pred             EEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccc--cccccccccccccccccccccccccchhHHHHHHHHhcC-
Confidence            34556667789999999999999999999999976432  234556789995421 22221 2222 224444443311 


Q ss_pred             hhhcCCeEEEeecCcc
Q 019991          114 FAALGRSCIHMTWSDR  129 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~  129 (332)
                          +..+..+|.+.-
T Consensus       195 ----~~~v~~vGDg~n  206 (215)
T PF00702_consen  195 ----PGEVAMVGDGVN  206 (215)
T ss_dssp             ----GGGEEEEESSGG
T ss_pred             ----CCEEEEEccCHH
Confidence                236777776543

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=95.26  E-value=0.035  Score=49.84  Aligned_cols=95  Identities=7%  Similarity=-0.005  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHH---h-c-Cc---ccccCCCCHHHHHHHHHHhCC-
Q 019991          171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK---L-G-GE---VRWMGKPDKLWATLFTMILRV-  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~---~-g-~e---~~~~GKP~p~if~~Al~~lg~-  241 (332)
                      |+++.++++.+++++...|+|++-..+...   .....++...|..   + . ..   .....||.+.....++++.+. 
T Consensus        70 ~pga~ell~~lk~~~~~~IVS~~~~~~~~~---il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~~  146 (203)
T TIGR02137        70 LEGAVEFVDWLRERFQVVILSDTFYEFSQP---LMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  146 (203)
T ss_pred             CccHHHHHHHHHhCCeEEEEeCChHHHHHH---HHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCCC
Confidence            577888888877765335778766554432   1222233344431   1 1 10   112456777777777777774 


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +++|||+ .+|+..++++|+..++-.|-
T Consensus       147 ~v~vGDs-~nDl~ml~~Ag~~ia~~ak~  173 (203)
T TIGR02137       147 VIAAGDS-YNDTTMLSEAHAGILFHAPE  173 (203)
T ss_pred             EEEEeCC-HHHHHHHHhCCCCEEecCCH
Confidence            8999999 58999999999999887554

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=95.20  E-value=0.049  Score=45.76  Aligned_cols=52  Identities=29%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ....+||+.++|+.|+++|++++++||+++..  ....++.+ +... |+.+++++
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~--~~~~~~~~-l~~~-f~~i~~~~  113 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRA--QKLLLRKH-LGDY-FDLILGSD  113 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHH--HHHHHHHH-HHhc-CcEEEecC
Confidence            45678999999999999999999999987643  22344443 4444 45566554

HAD subfamilies caused by an overly broad single model.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=95.03  E-value=0.021  Score=50.94  Aligned_cols=53  Identities=26%  Similarity=0.496  Sum_probs=43.8

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|++|++. ++++++||++..  .+...|+++|+... |+.++++++
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~--~~~~~l~~~~l~~~-fd~i~~~~~  147 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRE--TQYKRLRKSGLFPF-FDDIFVSED  147 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCchH--HHHHHHHHCCcHhh-cCEEEEcCc
Confidence            357899999999999999 999999998643  34567889999887 688887754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02811 hydrolase

Probab=95.02  E-value=0.053  Score=48.79  Aligned_cols=53  Identities=17%  Similarity=0.162  Sum_probs=38.8

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHH-HhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL-KSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L-~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++|+.|++.|++++++||+++..  +...+ +..|+... |+.++++.
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~--~~~~~~~~~~l~~~-f~~i~~~~  129 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRH--FDLKTQRHGELFSL-MHHVVTGD  129 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhh--HHHHHcccHHHHhh-CCEEEECC
Confidence            55789999999999999999999999987532  22223 23355555 56777776

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=94.94  E-value=0.051  Score=47.23  Aligned_cols=55  Identities=20%  Similarity=0.287  Sum_probs=43.0

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .+...++|| .++|+.|++. ++++++||+++..  +...|+++|+... |+.+++++++
T Consensus        84 ~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~--~~~~l~~~~l~~~-fd~i~~~~~~  138 (188)
T PRK10725         84 LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAI--AEALLAHLGLRRY-FDAVVAADDV  138 (188)
T ss_pred             hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHH--HHHHHHhCCcHhH-ceEEEehhhc
Confidence            345677885 6999999875 8999999976543  4577899999887 7888888764

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=94.93  E-value=0.037  Score=47.83  Aligned_cols=53  Identities=17%  Similarity=0.218  Sum_probs=42.1

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..+++||+.++++.|++.|++++++||+.+..  +...++++|+... |+.++++.
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~--~~~~l~~~~l~~~-f~~i~~~~  122 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFF--IDPVLEGIGEKDV-FIEIYSNP  122 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHH--HHHHHHHcCChhh-eeEEeccC
Confidence            36899999999999999999999999986532  4456788888776 56776654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=94.93  E-value=0.083  Score=54.59  Aligned_cols=100  Identities=16%  Similarity=0.136  Sum_probs=65.7

Q ss_pred             CccEEEEeccceeec----CCccCcCHHHHHHHHHHCC-CeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHH
Q 019991           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH  103 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~----g~~~ipGa~e~L~~L~~~G-~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~  103 (332)
                      .+..+.+..||++.-    ..+++||+.++|++|+++| ++++++||.++.  .....++++|+... |..+ .+.+- .
T Consensus       363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~--~a~~i~~~lgi~~~-f~~~-~p~~K-~  437 (556)
T TIGR01525       363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRS--AAEAVAAELGIDEV-HAEL-LPEDK-L  437 (556)
T ss_pred             CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHH--HHHHHHHHhCCCee-eccC-CHHHH-H
Confidence            356677777875543    5789999999999999999 999999997643  24456788999766 5544 33322 2


Q ss_pred             HHHhhcCChhhhhcCCeEEEeecCcccchhhhcCC
Q 019991          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       104 ~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                      +.+++...     .|.++..+|.+..+...++..|
T Consensus       438 ~~v~~l~~-----~~~~v~~vGDg~nD~~al~~A~  467 (556)
T TIGR01525       438 AIVKELQE-----EGGVVAMVGDGINDAPALAAAD  467 (556)
T ss_pred             HHHHHHHH-----cCCEEEEEECChhHHHHHhhCC
Confidence            23333211     1457777787654444455444

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=94.89  E-value=0.085  Score=47.12  Aligned_cols=43  Identities=26%  Similarity=0.249  Sum_probs=34.5

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++||+.++|+.|+++|++++++||+...  .....++++|+...
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~--~~~~~l~~~~i~~~  127 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDL--FAEHVKDKLGLDAA  127 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHH--HHHHHHHHcCCCce
Confidence            57899999999999999999999997642  23455677888654

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=94.84  E-value=0.073  Score=54.77  Aligned_cols=97  Identities=15%  Similarity=0.162  Sum_probs=61.3

Q ss_pred             EEEEeccc----eeecCCccCcCHHHHHHHHHHCCC-eEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHH
Q 019991           32 AWLLDQFG----VLHDGKKPYPGAISTLEMLATTGA-KMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        32 ~vlfDlDG----vL~~g~~~ipGa~e~L~~L~~~G~-~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      .+.+-.||    ++....+++||+.+.|++|+++|+ +++++||.+..  .....++++|+... |..+. +.+- ...+
T Consensus       344 ~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~--~a~~i~~~lgi~~~-f~~~~-p~~K-~~~i  418 (536)
T TIGR01512       344 IVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRA--VAERVARELGIDEV-HAELL-PEDK-LEIV  418 (536)
T ss_pred             EEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHH--HHHHHHHHcCChhh-hhccC-cHHH-HHHH
Confidence            34444554    445567899999999999999999 99999997543  24456788999765 44433 3222 2233


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                      ++....     |.++..+|.+..+...++..|
T Consensus       419 ~~l~~~-----~~~v~~vGDg~nD~~al~~A~  445 (536)
T TIGR01512       419 KELREK-----YGPVAMVGDGINDAPALAAAD  445 (536)
T ss_pred             HHHHhc-----CCEEEEEeCCHHHHHHHHhCC
Confidence            332211     457777786554444455544

.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.76  E-value=0.03  Score=50.06  Aligned_cols=54  Identities=26%  Similarity=0.414  Sum_probs=45.1

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~  102 (332)
                      .+++|++.++|+.+++. ++++++||+.+..  ...+|+++|+... |+.+++|++.-
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~--~~~~l~~~gl~~~-Fd~v~~s~~~g  151 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPH--QERKLRQLGLLDY-FDAVFISEDVG  151 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHH--HHHHHHHcCChhh-hheEEEecccc
Confidence            67899999999999988 9999999975432  4578899998888 79999987655

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=94.71  E-value=0.16  Score=52.58  Aligned_cols=100  Identities=18%  Similarity=0.198  Sum_probs=64.3

Q ss_pred             CccEEEEeccceee----cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL~----~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      ....+.++.||++.    -..+++||+.++|++|++.|++++++||..+.  .....++++|++ . |..+. +.+ ..+
T Consensus       384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~--~a~~ia~~lgi~-~-~~~~~-p~~-K~~  457 (562)
T TIGR01511       384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRK--TAKAVAKELGIN-V-RAEVL-PDD-KAA  457 (562)
T ss_pred             CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHH--HHHHHHHHcCCc-E-EccCC-hHH-HHH
Confidence            35668888887763    36689999999999999999999999997643  234556778986 2 33332 221 122


Q ss_pred             HHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       105 ~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      .+++....     |+++..+|.+..+...++..|+
T Consensus       458 ~v~~l~~~-----~~~v~~VGDg~nD~~al~~A~v  487 (562)
T TIGR01511       458 LIKELQEK-----GRVVAMVGDGINDAPALAQADV  487 (562)
T ss_pred             HHHHHHHc-----CCEEEEEeCCCccHHHHhhCCE
Confidence            22222111     5678888876554445555543

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=94.67  E-value=0.025  Score=50.09  Aligned_cols=52  Identities=19%  Similarity=0.188  Sum_probs=37.3

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh-CCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS-LGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~-lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|+.|+++|++++++||+++...  ...+.. .|+... |+.++++.+
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~--~~~~~~~~~l~~~-fd~v~~s~~  136 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT--TFWPEEYPEVRAA-ADHIYLSQD  136 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH--HHHHhhchhHHHh-cCEEEEecc
Confidence            5799999999999999999999999875321  122222 355555 577777754

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=94.63  E-value=0.043  Score=47.73  Aligned_cols=53  Identities=23%  Similarity=0.352  Sum_probs=41.7

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~  102 (332)
                      ...++||+.++|+.|+   ++++++||+++.  .....++++|+... |+.++++++..
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~--~~~~~l~~~gl~~~-fd~i~~~~~~~  134 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRA--HARRALNRLGIEDC-FDGIFCFDTAN  134 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHH--HHHHHHHHcCcHhh-hCeEEEeeccc
Confidence            4468999999999997   589999998753  35577889999877 78888876543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=94.40  E-value=0.28  Score=41.13  Aligned_cols=98  Identities=9%  Similarity=0.072  Sum_probs=62.2

Q ss_pred             cEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHHhhcC
Q 019991           31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRD  110 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~~  110 (332)
                      +...-++++|+..+..+++.+.+.|+.|++. ..+++.|.....+  +.+-++-.|++.+. ...-.-....+..+.+..
T Consensus        15 d~~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gs--l~~lae~~gi~~~r-v~a~a~~e~K~~ii~eLk   90 (152)
T COG4087          15 DSKAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGS--LVQLAEFVGIPVER-VFAGADPEMKAKIIRELK   90 (152)
T ss_pred             eeecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchH--HHHHHHHcCCceee-eecccCHHHHHHHHHHhc
Confidence            3556678999999999999999999999999 9999998765432  34445567887652 222222233333444443


Q ss_pred             ChhhhhcCCeEEEeecCcccchhhhcC
Q 019991          111 DAWFAALGRSCIHMTWSDRGAISLEGL  137 (332)
Q Consensus       111 ~~~~~~~G~~v~~~g~~~~~~~~l~~~  137 (332)
                      ++     +..+..+|.+.-+...|++.
T Consensus        91 k~-----~~k~vmVGnGaND~laLr~A  112 (152)
T COG4087          91 KR-----YEKVVMVGNGANDILALREA  112 (152)
T ss_pred             CC-----CcEEEEecCCcchHHHhhhc
Confidence            22     45666667654332244443

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=94.24  E-value=0.046  Score=46.87  Aligned_cols=84  Identities=14%  Similarity=0.061  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-h---------c---CcccccCCCCHHHHHHHHH
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L---------G---GEVRWMGKPDKLWATLFTM  237 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~---------g---~e~~~~GKP~p~if~~Al~  237 (332)
                      +++.+.++.+.++|.++ |+|+....+...-   +...++...+.. +         |   .++...|...+..+....+
T Consensus        76 ~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~---~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~  152 (177)
T TIGR01488        76 PGARELISWLKERGIDTVIVSGGFDFFVEPV---AEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLE  152 (177)
T ss_pred             cCHHHHHHHHHHCCCEEEEECCCcHHHHHHH---HHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHH
Confidence            56788888888888885 6677655433221   111122222221 1         1   0012233444567888788


Q ss_pred             HhCC----eEEEeCChhhHHHHHHHc
Q 019991          238 ILRV----QMQLESSPYSLLEGSMQL  259 (332)
Q Consensus       238 ~lg~----~lmIGDs~~~DI~gA~~a  259 (332)
                      +.++    .++|||+ .+|+..++.+
T Consensus       153 ~~~~~~~~~~~iGDs-~~D~~~~~~a  177 (177)
T TIGR01488       153 ESKITLKKIIAVGDS-VNDLPMLKLA  177 (177)
T ss_pred             HhCCCHHHEEEEeCC-HHHHHHHhcC
Confidence            7776    5899999 5899988754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PLN03017 trehalose-phosphatase

Probab=94.16  E-value=0.068  Score=52.29  Aligned_cols=58  Identities=19%  Similarity=0.140  Sum_probs=41.9

Q ss_pred             ccccccHHHHhhhc--CccEEEEeccceee---c-CC--ccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           15 FQTLNGLRHIAETR--RFKAWLLDQFGVLH---D-GK--KPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        15 ~~~~~~~~~~~~~~--~~~~vlfDlDGvL~---~-g~--~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      |.-++.+.++++..  +..++++|+||||.   + ..  .+-++..++|++|. .+.+++++|..+.
T Consensus        94 psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~  159 (366)
T PLN03017         94 PSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCI  159 (366)
T ss_pred             ChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCH
Confidence            44445566665411  23578899999999   3 22  57788899999999 7899999997553

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=94.13  E-value=0.041  Score=51.85  Aligned_cols=84  Identities=12%  Similarity=0.025  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH----HHHHH-h--cCcccccCCCCH---------HHHHH
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA----SKFEK-L--GGEVRWMGKPDK---------LWATL  234 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~----~~~e~-~--g~e~~~~GKP~p---------~if~~  234 (332)
                      +++.+.++.|.++|+|+ |+|+.-......   .+...++.    ..+.. +  ..+....|||.|         .+++.
T Consensus       124 pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~---vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~  200 (277)
T TIGR01544       124 DGYENFFDKLQQHSIPVFIFSAGIGNVLEE---VLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALR  200 (277)
T ss_pred             cCHHHHHHHHHHCCCcEEEEeCCcHHHHHH---HHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHH
Confidence            66788898888999996 667654432211   11111121    11111 1  123466789988         78888


Q ss_pred             HHHHhC--C----eEEEeCChhhHHHHHHHc
Q 019991          235 FTMILR--V----QMQLESSPYSLLEGSMQL  259 (332)
Q Consensus       235 Al~~lg--~----~lmIGDs~~~DI~gA~~a  259 (332)
                      +.+.++  +    +++|||++ +|+.+|.-.
T Consensus       201 ~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~  230 (277)
T TIGR01544       201 NTEYFNQLKDRSNIILLGDSQ-GDLRMADGV  230 (277)
T ss_pred             HHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence            888887  2    69999995 899997765

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=94.11  E-value=0.08  Score=56.50  Aligned_cols=56  Identities=23%  Similarity=0.150  Sum_probs=41.7

Q ss_pred             CccEEEEeccceeecCC------ccCcCHHHHHHHHHH-CCCeEEEEeCCCCChhHHHHHHHhCC
Q 019991           29 RFKAWLLDQFGVLHDGK------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLG   86 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------~~ipGa~e~L~~L~~-~G~~v~~vTN~s~~~~~~~~~L~~lG   86 (332)
                      +.+.++||+||||.+..      .+-+...++|+.|.+ .|..++++|..+  ...+.+.+...+
T Consensus       491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~--~~~l~~~~~~~~  553 (726)
T PRK14501        491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD--RDTLERWFGDLP  553 (726)
T ss_pred             cceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC--HHHHHHHhCCCC
Confidence            56899999999999732      356788899999999 599999999754  333444444333

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=93.90  E-value=0.11  Score=46.47  Aligned_cols=50  Identities=24%  Similarity=0.271  Sum_probs=38.5

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccc-ccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAG-AITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~-Iits~   99 (332)
                      ...++||+.++|+.|   +++++++||+++.  .+...|+.+|+... |+. ++++.
T Consensus        86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~~~--~~~~~l~~~~l~~~-F~~~v~~~~  136 (221)
T PRK10563         86 ELEPIAGANALLESI---TVPMCVVSNGPVS--KMQHSLGKTGMLHY-FPDKLFSGY  136 (221)
T ss_pred             cCCcCCCHHHHHHHc---CCCEEEEeCCcHH--HHHHHHHhcChHHh-CcceEeeHH
Confidence            467899999999998   4999999997643  35567888999877 654 55554

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=93.69  E-value=0.46  Score=42.07  Aligned_cols=98  Identities=11%  Similarity=0.067  Sum_probs=68.2

Q ss_pred             cccCHHHHHHHHHHHHhCCCcEEE-ecCCccceeccceec---CCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC-
Q 019991          167 RPMSLQDLEKILEICASKKIPMVV-ANPDYVTVEARALRV---MPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV-  241 (332)
Q Consensus       167 ~~~~y~~l~~~l~~l~~~g~~lIa-TN~D~~~~~~~~~~l---~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~-  241 (332)
                      ..-.|++..++++.-++.|+++.. ++...-.   .++.+   ..|.+..+|...- +...=+|-...-|..+++..|. 
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~A---QkL~Fghs~agdL~~lfsGyf-DttiG~KrE~~SY~kIa~~iGl~  176 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA---QKLFFGHSDAGDLNSLFSGYF-DTTIGKKRESQSYAKIAGDIGLP  176 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchh---HHHhhcccccccHHhhhccee-eccccccccchhHHHHHHhcCCC
Confidence            334588999999888899999644 4433221   11222   4566777665420 1122246677789999999998 


Q ss_pred             ---eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 ---QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 ---~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                         .+++.|+++ ...+|+.+||+|+++.|-
T Consensus       177 p~eilFLSDn~~-EL~AA~~vGl~t~l~~R~  206 (229)
T COG4229         177 PAEILFLSDNPE-ELKAAAGVGLATGLAVRP  206 (229)
T ss_pred             chheEEecCCHH-HHHHHHhcchheeeeecC
Confidence               589999975 799999999999998764

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=93.66  E-value=0.11  Score=57.65  Aligned_cols=52  Identities=21%  Similarity=0.408  Sum_probs=41.3

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC-ccccccccccHHH
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD-PSLFAGAITSGEL  101 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~-~~~f~~Iits~~v  101 (332)
                      ++||+.++|++|+++|++++++||+.+.  .+...|+++|+. .. |+.++++.++
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~--~~~~~L~~~gl~~~~-Fd~iv~~~~~  214 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRI--KVDANLAAAGLPLSM-FDAIVSADAF  214 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHH--HHHHHHHHcCCChhH-CCEEEECccc
Confidence            4889999999999999999999997643  345678899996 44 5777776654

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=93.65  E-value=0.17  Score=45.33  Aligned_cols=58  Identities=22%  Similarity=0.074  Sum_probs=45.3

Q ss_pred             CccEEEEeccceeecCC--------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGK--------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~--------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ..++.++|+||||++..        -.-|++.+||+.+-+ .+.++|.|.++...  +...+..+|+..
T Consensus        20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~y--a~~~l~~l~~~~   85 (195)
T TIGR02245        20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKW--IEIKMTELGVLT   85 (195)
T ss_pred             CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHH--HHHHHHHhcccC
Confidence            56899999999999862        457999999999988 89999999876432  334567777643

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=93.51  E-value=0.11  Score=53.52  Aligned_cols=88  Identities=6%  Similarity=-0.071  Sum_probs=56.3

Q ss_pred             ccCHHHHHHHHHHHHhCCC-cE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCCeEEE
Q 019991          168 PMSLQDLEKILEICASKKI-PM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQL  245 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~-~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~~lmI  245 (332)
                      ...++++.++++.|+++|. ++ ++||.+......-   ...-++..+|...      ..++.+.+.+...++....+||
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i---~~~lgi~~~f~~~------~p~~K~~~i~~l~~~~~~v~~v  431 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERV---ARELGIDEVHAEL------LPEDKLEIVKELREKYGPVAMV  431 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHH---HHHcCChhhhhcc------CcHHHHHHHHHHHhcCCEEEEE
Confidence            4468999999999999999 85 7787655433221   1222233333321      1234455555554444457999


Q ss_pred             eCChhhHHHHHHHcCCcEEEE
Q 019991          246 ESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ||+. +|+.+++++|+ ++.+
T Consensus       432 GDg~-nD~~al~~A~v-gia~  450 (536)
T TIGR01512       432 GDGI-NDAPALAAADV-GIAM  450 (536)
T ss_pred             eCCH-HHHHHHHhCCE-EEEe
Confidence            9995 79999999997 4444

.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=93.45  E-value=0.15  Score=46.51  Aligned_cols=56  Identities=21%  Similarity=0.228  Sum_probs=42.4

Q ss_pred             ccHHHHhhhcCccEEEEeccceeec--------CCccCcCHHHHHHHHHHCCCeEEEEeCCCCC
Q 019991           19 NGLRHIAETRRFKAWLLDQFGVLHD--------GKKPYPGAISTLEMLATTGAKMVVISNSSRR   74 (332)
Q Consensus        19 ~~~~~~~~~~~~~~vlfDlDGvL~~--------g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~   74 (332)
                      +.+.++++..+..+.+=.+.|-+|.        ...++||+.++|++|+++|++++++||++..
T Consensus        60 ~~~~~~~~~d~k~~~lk~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~  123 (220)
T TIGR01691        60 RKLHAEMDKDRKATPLKTLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVP  123 (220)
T ss_pred             HHHHHHHHcCCCcchHHHHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHH
Confidence            3455555533455667777777664        2368999999999999999999999998754

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=93.37  E-value=0.061  Score=55.58  Aligned_cols=89  Identities=4%  Similarity=-0.046  Sum_probs=54.2

Q ss_pred             ccCHHHHHHHHHHHHhCC-CcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCCeEEE
Q 019991          168 PMSLQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQL  245 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g-~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~~lmI  245 (332)
                      ...|+++.++++.|+++| +++ ++||........-   ...-++..+|..      ..+++.+.+++...+.-...+||
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i---~~~lgi~~~f~~------~~p~~K~~~v~~l~~~~~~v~~v  453 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAV---AAELGIDEVHAE------LLPEDKLAIVKELQEEGGVVAMV  453 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHH---HHHhCCCeeecc------CCHHHHHHHHHHHHHcCCEEEEE
Confidence            446899999999999999 885 7787655432211   111122222221      11233345555544332347999


Q ss_pred             eCChhhHHHHHHHcCCcEEEE
Q 019991          246 ESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ||+. +|+.++++||+-..|-
T Consensus       454 GDg~-nD~~al~~A~vgia~g  473 (556)
T TIGR01525       454 GDGI-NDAPALAAADVGIAMG  473 (556)
T ss_pred             ECCh-hHHHHHhhCCEeEEeC
Confidence            9995 8999999999655544

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=93.30  E-value=0.14  Score=49.96  Aligned_cols=57  Identities=18%  Similarity=0.179  Sum_probs=41.5

Q ss_pred             CccEEEEeccceeecCCccCcCH---HHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhC
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGA---ISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSL   85 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa---~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~l   85 (332)
                      .-+.+-||-|+|||+...-+..-   ..-|-.|-++|+.+++||.++- ..+.+.++|..+
T Consensus       146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GL  206 (408)
T PF06437_consen  146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGL  206 (408)
T ss_pred             CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHH
Confidence            35799999999999977555333   3445566689999999999874 445566666544

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=93.29  E-value=0.31  Score=43.68  Aligned_cols=44  Identities=23%  Similarity=0.363  Sum_probs=34.2

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ..+++||+.++|+.+++.+ +++++||+.+..  ....++++|+...
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~--~~~il~~lgi~~~  109 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYEF--SQPLMRQLGFPTL  109 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCChHHH--HHHHHHHcCCchh
Confidence            4578999999999999975 999999986532  2345678888743

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=93.28  E-value=0.23  Score=46.92  Aligned_cols=38  Identities=24%  Similarity=0.371  Sum_probs=30.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l   85 (332)
                      .++||+.++|+.|++.|++++++||++...  +...++.+
T Consensus       144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~--~~~~l~~~  181 (286)
T PLN02779        144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKA--VSKIVNTL  181 (286)
T ss_pred             CchhhHHHHHHHHHHCCCeEEEEeCCCHHH--HHHHHHHh
Confidence            689999999999999999999999976432  33344444

>PLN02954 phosphoserine phosphatase

Probab=93.04  E-value=0.14  Score=45.82  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=33.9

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      .++||+.++|+.|+++|++++++||+.+..  +...++.+|++
T Consensus        84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~--i~~~l~~~gi~  124 (224)
T PLN02954         84 RLSPGIPELVKKLRARGTDVYLVSGGFRQM--IAPVAAILGIP  124 (224)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEECCCcHHH--HHHHHHHhCCC
Confidence            367999999999999999999999987532  44567788886

>PLN02151 trehalose-phosphatase

Probab=93.03  E-value=0.17  Score=49.33  Aligned_cols=55  Identities=22%  Similarity=0.170  Sum_probs=40.2

Q ss_pred             ccccHHHHhhhc--CccEEEEeccceee------cCCccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           17 TLNGLRHIAETR--RFKAWLLDQFGVLH------DGKKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        17 ~~~~~~~~~~~~--~~~~vlfDlDGvL~------~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      -++.+.++++..  +-.++++|.||||.      +...+-|+..++|+.|. .+.+++++|..+
T Consensus        83 a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~  145 (354)
T PLN02151         83 ALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC  145 (354)
T ss_pred             HHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence            344566666522  23589999999999      33367888899999999 457999999754

>PLN02382 probable sucrose-phosphatase

Probab=92.91  E-value=0.16  Score=50.66  Aligned_cols=57  Identities=11%  Similarity=-0.052  Sum_probs=39.4

Q ss_pred             EEEEeccceeecCC--ccC--cCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           32 AWLLDQFGVLHDGK--KPY--PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        32 ~vlfDlDGvL~~g~--~~i--pGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++.|+||||+++.  .-.  +...+.++++.++|+.++++|.  |+...+...++.+++..+
T Consensus        11 lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTG--R~~~~~~~l~~~~~l~~p   71 (413)
T PLN02382         11 MIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTG--RSPTLYKELRKEKPLLTP   71 (413)
T ss_pred             EEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcC--CCHHHHHHHHHhCCCCCC
Confidence            67789999999863  222  2344455888999999999996  444455555667776654

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=92.81  E-value=0.19  Score=47.41  Aligned_cols=45  Identities=11%  Similarity=0.073  Sum_probs=36.7

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ...+.||+.+++++|+++|+|++++|++.+.  -+...|+.+|+...
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~--~Ie~vL~~lgl~~~  163 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGN--VLEEVLRQAGVYHP  163 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHH--HHHHHHHHcCCCCc
Confidence            5688999999999999999999999987653  24556777887543

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=92.60  E-value=0.089  Score=48.07  Aligned_cols=48  Identities=21%  Similarity=0.240  Sum_probs=37.7

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ..++||+.++|+.|++. ++++++||++..       ++..|+... |+.++++++.
T Consensus       112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-------~~~~gl~~~-fd~i~~~~~~  159 (238)
T PRK10748        112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-------PELFGLGDY-FEFVLRAGPH  159 (238)
T ss_pred             CCCCccHHHHHHHHHcC-CCEEEEECCCch-------HHHCCcHHh-hceeEecccC
Confidence            35679999999999875 999999997642       467888877 6888777644

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=92.12  E-value=0.31  Score=52.97  Aligned_cols=53  Identities=28%  Similarity=0.325  Sum_probs=40.6

Q ss_pred             CccEEEEeccceeecCC----ccCcCHHHHHHHH-HHCCCeEEEEeCCCCChhHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGK----KPYPGAISTLEML-ATTGAKMVVISNSSRRASTTIDKLK   83 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~----~~ipGa~e~L~~L-~~~G~~v~~vTN~s~~~~~~~~~L~   83 (332)
                      +.+++++|+||||....    .+-|+..++|+.| ++.|..++++|..+.  +.+.+.|.
T Consensus       595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~--~~L~~~f~  652 (854)
T PLN02205        595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSR--KTLADWFS  652 (854)
T ss_pred             cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCH--HHHHHHhC
Confidence            46899999999999654    5667889999998 677999999997543  33444443

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=91.04  E-value=0.15  Score=47.85  Aligned_cols=86  Identities=9%  Similarity=-0.025  Sum_probs=52.7

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHH-HHHh-cCcccccCCCCHHHHHHHHHHhCCeEEE
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK-FEKL-GGEVRWMGKPDKLWATLFTMILRVQMQL  245 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~-~e~~-g~e~~~~GKP~p~if~~Al~~lg~~lmI  245 (332)
                      ..++++.++++.+.++|.++ ++||.+......-...+..-++... .+.+ .++   -++|.+.-++.+.+.+++.++|
T Consensus       118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~---~~~~K~~rr~~I~~~y~Ivl~v  194 (266)
T TIGR01533       118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKK---DKSSKESRRQKVQKDYEIVLLF  194 (266)
T ss_pred             CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCC---CCCCcHHHHHHHHhcCCEEEEE
Confidence            35689999999998999885 8899764322100000111111111 1111 121   1367778888888888889999


Q ss_pred             eCChhhHHHHHHH
Q 019991          246 ESSPYSLLEGSMQ  258 (332)
Q Consensus       246 GDs~~~DI~gA~~  258 (332)
                      ||++ .|+.++..
T Consensus       195 GD~~-~Df~~~~~  206 (266)
T TIGR01533       195 GDNL-LDFDDFFY  206 (266)
T ss_pred             CCCH-HHhhhhhc
Confidence            9995 79976443

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR00685 T6PP trehalose-phosphatase

Probab=91.00  E-value=0.36  Score=44.26  Aligned_cols=43  Identities=23%  Similarity=0.260  Sum_probs=33.6

Q ss_pred             CccEEEEeccceeecCC------ccCcCHHHHHHHHHHC-CCeEEEEeCC
Q 019991           29 RFKAWLLDQFGVLHDGK------KPYPGAISTLEMLATT-GAKMVVISNS   71 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------~~ipGa~e~L~~L~~~-G~~v~~vTN~   71 (332)
                      +..+++||.||||....      .+-|+..+.|+.|.+. +..++++|..
T Consensus         2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR   51 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGR   51 (244)
T ss_pred             CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence            45789999999998632      3568888999999876 4567899975

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PLN02580 trehalose-phosphatase

Probab=90.88  E-value=0.43  Score=47.07  Aligned_cols=57  Identities=23%  Similarity=0.156  Sum_probs=40.6

Q ss_pred             ccccccHHHHhhhc--CccEEEEeccceeec------CCccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           15 FQTLNGLRHIAETR--RFKAWLLDQFGVLHD------GKKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        15 ~~~~~~~~~~~~~~--~~~~vlfDlDGvL~~------g~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |.-++++.++..-.  +-.++++|.||||..      ...+-|+..++|+.|.+. .+++|+|..+
T Consensus       102 p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~  166 (384)
T PLN02580        102 PSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRS  166 (384)
T ss_pred             cHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCC
Confidence            33444566665422  235888999999974      335678889999999887 4899999743

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=90.32  E-value=0.43  Score=40.78  Aligned_cols=46  Identities=22%  Similarity=0.223  Sum_probs=35.6

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .....+.||+.++++.++++|++++++|++.+.  .+...++++|+..
T Consensus        69 ~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~--~i~~~~~~~g~~~  114 (177)
T TIGR01488        69 ARQVALRPGARELISWLKERGIDTVIVSGGFDF--FVEPVAEKLGIDD  114 (177)
T ss_pred             HhcCCcCcCHHHHHHHHHHCCCEEEEECCCcHH--HHHHHHHHcCCch
Confidence            344567899999999999999999999997643  2344567777764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=90.27  E-value=1  Score=49.37  Aligned_cols=58  Identities=19%  Similarity=0.454  Sum_probs=44.0

Q ss_pred             cceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           38 FGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        38 DGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      =|.+.-.+++.||+.++++.|+++|+++.++|+....+  .....+++|+... ...++++
T Consensus       520 lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~t--A~~ia~~~Gi~~~-~~~~v~g  577 (884)
T TIGR01522       520 LGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQET--AVSIARRLGMPSK-TSQSVSG  577 (884)
T ss_pred             EEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHH--HHHHHHHcCCCCC-CCceeEh
Confidence            37777788999999999999999999999999976433  2334578899754 2444443

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=90.24  E-value=1.2  Score=42.85  Aligned_cols=58  Identities=19%  Similarity=0.198  Sum_probs=47.1

Q ss_pred             EEEEeccceeecC-------------------CccCcCHHHHHHHHHHCC-CeEEEEeCCCCC-hhHHHHHHHhCCCCc
Q 019991           32 AWLLDQFGVLHDG-------------------KKPYPGAISTLEMLATTG-AKMVVISNSSRR-ASTTIDKLKSLGFDP   89 (332)
Q Consensus        32 ~vlfDlDGvL~~g-------------------~~~ipGa~e~L~~L~~~G-~~v~~vTN~s~~-~~~~~~~L~~lGl~~   89 (332)
                      ++|-|+|.|+...                   ..++||+..+.+.|.+.| -++.++||++.. -+.+.+.+..-+++.
T Consensus       163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~  241 (373)
T COG4850         163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY  241 (373)
T ss_pred             eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC
Confidence            7999999998763                   268999999999999998 999999999853 355666666666664

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=90.20  E-value=0.91  Score=40.63  Aligned_cols=27  Identities=22%  Similarity=0.309  Sum_probs=19.2

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      ++-||+.|+...|+++|..++++|.+=
T Consensus        88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF  114 (227)
T KOG1615|consen   88 TLTPGIRELVSRLHARGTQVYLISGGF  114 (227)
T ss_pred             ccCCCHHHHHHHHHHcCCeEEEEcCCh
Confidence            456777777777777777777777653

>PRK10671 copA copper exporting ATPase; Provisional

Probab=89.98  E-value=0.92  Score=49.29  Aligned_cols=100  Identities=18%  Similarity=0.203  Sum_probs=64.8

Q ss_pred             ccEEEEeccce----eecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHH
Q 019991           30 FKAWLLDQFGV----LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (332)
Q Consensus        30 ~~~vlfDlDGv----L~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~  105 (332)
                      ...+.+-.||.    +.-.+++.||+.+.|+.|++.|++++++|+.....  ....++++|+... |..+. +.+ ..+.
T Consensus       630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~--a~~ia~~lgi~~~-~~~~~-p~~-K~~~  704 (834)
T PRK10671        630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTT--ANAIAKEAGIDEV-IAGVL-PDG-KAEA  704 (834)
T ss_pred             CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHcCCCEE-EeCCC-HHH-HHHH
Confidence            44566656655    55678999999999999999999999999965432  3345678999765 44433 322 2233


Q ss_pred             HhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      +++....     |.+++.+|.+..+...++..|+
T Consensus       705 i~~l~~~-----~~~v~~vGDg~nD~~al~~Agv  733 (834)
T PRK10671        705 IKRLQSQ-----GRQVAMVGDGINDAPALAQADV  733 (834)
T ss_pred             HHHHhhc-----CCEEEEEeCCHHHHHHHHhCCe
Confidence            4333221     5678788876544445555544

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=89.75  E-value=0.29  Score=45.24  Aligned_cols=62  Identities=21%  Similarity=0.237  Sum_probs=37.5

Q ss_pred             cEEEEeccceeecCCccCcCHHHHHHHHH---HCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           31 KAWLLDQFGVLHDGKKPYPGAISTLEMLA---TTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~~~ipGa~e~L~~L~---~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      ..++.|+||||+++..  ++..++-+.++   +.+..++++|  +|+.+.+.+.+++.+++.+  +.++++
T Consensus         3 ~ll~sDlD~Tl~~~~~--~~~~~l~~~l~~~~~~~~~~v~~T--GRs~~~~~~~~~~~~l~~P--d~~I~s   67 (247)
T PF05116_consen    3 RLLASDLDGTLIDGDD--EALARLEELLEQQARPEILFVYVT--GRSLESVLRLLREYNLPQP--DYIITS   67 (247)
T ss_dssp             EEEEEETBTTTBHCHH--HHHHHHHHHHHHHHCCGEEEEEE---SS-HHHHHHHHHHCT-EE---SEEEET
T ss_pred             EEEEEECCCCCcCCCH--HHHHHHHHHHHHhhCCCceEEEEC--CCCHHHHHHHHHhCCCCCC--CEEEec
Confidence            5789999999994332  23344444444   4455566666  5666778888888888754  445554

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=89.73  E-value=0.045  Score=55.01  Aligned_cols=95  Identities=14%  Similarity=0.044  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHhCCCc-EEEecCCccceeccce-ecCC-----ChhHHHHHHh---cCccc-------------ccCCCC
Q 019991          172 QDLEKILEICASKKIP-MVVANPDYVTVEARAL-RVMP-----GTLASKFEKL---GGEVR-------------WMGKPD  228 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~-~l~~-----G~i~~~~e~~---g~e~~-------------~~GKP~  228 (332)
                      +++...|+.+++.|.+ +++||++..+...... .++.     ..+..+|+.+   .++|.             ..|++.
T Consensus       186 ~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l~  265 (448)
T PF05761_consen  186 PKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKLK  265 (448)
T ss_dssp             CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSEE
T ss_pred             chHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCccc
Confidence            4677778888888976 6899998876543221 1111     1466666552   12211             122221


Q ss_pred             HHH---------------HHHHHHHhCC----eEEEeCChhhHHHHHHHc-CCcEEEE
Q 019991          229 KLW---------------ATLFTMILRV----QMQLESSPYSLLEGSMQL-NLDLTVM  266 (332)
Q Consensus       229 p~i---------------f~~Al~~lg~----~lmIGDs~~~DI~gA~~a-G~~ti~~  266 (332)
                      ..-               .....+.+|.    .++|||.+.+||..++.. ||+|++|
T Consensus       266 ~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~I  323 (448)
T PF05761_consen  266 WGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAI  323 (448)
T ss_dssp             CS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE
T ss_pred             cccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEE
Confidence            111               1222233333    589999999999998885 9999988

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=89.11  E-value=0.15  Score=43.72  Aligned_cols=49  Identities=20%  Similarity=0.300  Sum_probs=37.1

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      +....++||+.++|+       +++++||+++..  ....++++|+... |+.++++++
T Consensus        86 ~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~--~~~~l~~~~l~~~-fd~v~~~~~  134 (175)
T TIGR01493        86 YKNLPPWPDSAAALA-------RVAILSNASHWA--FDQFAQQAGLPWY-FDRAFSVDT  134 (175)
T ss_pred             HhcCCCCCchHHHHH-------HHhhhhCCCHHH--HHHHHHHCCCHHH-HhhhccHhh
Confidence            345679999999998       378999986532  4457889999887 677777664

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=88.74  E-value=0.31  Score=44.56  Aligned_cols=88  Identities=9%  Similarity=-0.073  Sum_probs=51.4

Q ss_pred             cccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHH-HHHHh-cCcccccCCCCHHHHHHHHHHhCC--
Q 019991          167 RPMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLAS-KFEKL-GGEVRWMGKPDKLWATLFTMILRV--  241 (332)
Q Consensus       167 ~~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~-~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--  241 (332)
                      ..-.|++..++++.|+++|.++ ++||+.+....-.. .+...++.. .++.+ ++....     ...+..++++++.  
T Consensus        22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~-~L~~~gl~~~~~~~Ii~s~~~~-----~~~l~~~~~~~~~~~   95 (242)
T TIGR01459        22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHK-TLKSLGINADLPEMIISSGEIA-----VQMILESKKRFDIRN   95 (242)
T ss_pred             CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHH-HHHHCCCCccccceEEccHHHH-----HHHHHhhhhhccCCC
Confidence            3445899999999999999986 88997654221000 122223433 44442 322111     1355566666654  


Q ss_pred             --eEEEeCChhhHHHHHHHcCC
Q 019991          242 --QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       242 --~lmIGDs~~~DI~gA~~aG~  261 (332)
                        .++|||+. .|++....+|.
T Consensus        96 ~~~~~vGd~~-~d~~~~~~~~~  116 (242)
T TIGR01459        96 GIIYLLGHLE-NDIINLMQCYT  116 (242)
T ss_pred             ceEEEeCCcc-cchhhhcCCCc
Confidence              58999984 57765544454

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional

Probab=88.67  E-value=3.8  Score=40.01  Aligned_cols=42  Identities=14%  Similarity=0.136  Sum_probs=35.6

Q ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        48 ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .|+..++++++++.|+.+.+.||+..-+++..+.|.+.|+..
T Consensus        76 ~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~~L~~~g~~~  117 (378)
T PRK05301         76 RKDLEELVAHARELGLYTNLITSGVGLTEARLAALKDAGLDH  117 (378)
T ss_pred             chhHHHHHHHHHHcCCcEEEECCCccCCHHHHHHHHHcCCCE
Confidence            588999999999999999999998865666778888888753

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=88.34  E-value=1.8  Score=41.75  Aligned_cols=42  Identities=19%  Similarity=0.127  Sum_probs=32.3

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.||+.++++.|++.|++++++||+.+...  ...++++|+..
T Consensus       181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~--~~l~~~Lgld~  222 (322)
T PRK11133        181 PLMPGLTELVLKLQALGWKVAIASGGFTYFA--DYLRDKLRLDA  222 (322)
T ss_pred             CCChhHHHHHHHHHHcCCEEEEEECCcchhH--HHHHHHcCCCe
Confidence            5789999999999999999999999875321  23345677753

>PRK11590 hypothetical protein; Provisional

Probab=88.27  E-value=0.75  Score=41.15  Aligned_cols=41  Identities=15%  Similarity=0.180  Sum_probs=31.6

Q ss_pred             CccCcCHHHHH-HHHHHCCCeEEEEeCCCCChhHHHHHHHhCCC
Q 019991           45 KKPYPGAISTL-EMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (332)
Q Consensus        45 ~~~ipGa~e~L-~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl   87 (332)
                      ..++||+.+.| +.+++.|++++++||+++..  ....++.+|+
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~--~~~il~~l~~  135 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPL--VEQVYFDTPW  135 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHH--HHHHHHHccc
Confidence            35699999999 67889999999999986532  2345567775

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=88.17  E-value=1.7  Score=46.29  Aligned_cols=111  Identities=23%  Similarity=0.277  Sum_probs=71.6

Q ss_pred             EEEEeccc----eeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH--H
Q 019991           32 AWLLDQFG----VLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ--Y  105 (332)
Q Consensus        32 ~vlfDlDG----vL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~--~  105 (332)
                      .+++-.||    ++.-.+++.|++.+++++|++.|+++..+|...+..  ..+.-+++|++.. +.+ +.|++-...  -
T Consensus       519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~--A~~iA~~lGId~v-~Ae-llPedK~~~V~~  594 (713)
T COG2217         519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRT--AEAIAKELGIDEV-RAE-LLPEDKAEIVRE  594 (713)
T ss_pred             EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHcChHhh-ecc-CCcHHHHHHHHH
Confidence            57888887    555688999999999999999999999999854322  2233467999765 334 444443322  2


Q ss_pred             HhhcCChhhhhcCCeEEEeecCcccchhhhcC--CccccC----CCCCccEEEEe
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGL--GLKVVE----NVEEADFILAH  154 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~--g~~~~~----~~~~~~~vv~~  154 (332)
                      |++.        |++|..+|.+.-+...|...  |+..-.    ..+-+|++++.
T Consensus       595 l~~~--------g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~  641 (713)
T COG2217         595 LQAE--------GRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMR  641 (713)
T ss_pred             HHhc--------CCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEec
Confidence            4433        67888888765444445443  332111    13567888884

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=88.10  E-value=0.63  Score=40.82  Aligned_cols=44  Identities=23%  Similarity=0.275  Sum_probs=34.5

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ..++||+.++++.++++|.+++++||+....  +...++.+|+...
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~--v~~~~~~lg~~~~  129 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTIL--VKPLARILGIDNA  129 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHH--HHHHHHHcCCcce
Confidence            3689999999999999999999999976532  3344567888643

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=87.54  E-value=1.5  Score=45.58  Aligned_cols=84  Identities=7%  Similarity=-0.030  Sum_probs=51.5

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCCeEEEe
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLE  246 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~~lmIG  246 (332)
                      ...+++..++++.|+++|+++ ++||........-   ...-++. ++.      ....++.+.+++...++-...+|||
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~i---a~~lgi~-~~~------~~~p~~K~~~v~~l~~~~~~v~~VG  473 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV---AKELGIN-VRA------EVLPDDKAALIKELQEKGRVVAMVG  473 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHH---HHHcCCc-EEc------cCChHHHHHHHHHHHHcCCEEEEEe
Confidence            345799999999999999985 6777554322211   1111111 110      1122344556665544333479999


Q ss_pred             CChhhHHHHHHHcCCc
Q 019991          247 SSPYSLLEGSMQLNLD  262 (332)
Q Consensus       247 Ds~~~DI~gA~~aG~~  262 (332)
                      |+. +|+.+++++|+-
T Consensus       474 Dg~-nD~~al~~A~vg  488 (562)
T TIGR01511       474 DGI-NDAPALAQADVG  488 (562)
T ss_pred             CCC-ccHHHHhhCCEE
Confidence            995 899999999984

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK11590 hypothetical protein; Provisional

Probab=87.13  E-value=0.58  Score=41.88  Aligned_cols=27  Identities=4%  Similarity=-0.380  Sum_probs=18.9

Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ..+-|||. +|+..-..+|- .+++|-..
T Consensus       179 ~~aY~Ds~-~D~pmL~~a~~-~~~vnp~~  205 (211)
T PRK11590        179 YSGYSDSK-QDNPLLYFCQH-RWRVTPRG  205 (211)
T ss_pred             EEEecCCc-ccHHHHHhCCC-CEEECccH
Confidence            35889995 89998888874 44554443

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=87.09  E-value=7.2  Score=34.73  Aligned_cols=60  Identities=15%  Similarity=0.113  Sum_probs=34.9

Q ss_pred             EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCCeEEEeCChhhHHHHHHHcCC
Q 019991          189 VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       189 IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~~lmIGDs~~~DI~gA~~aG~  261 (332)
                      |.+|.+...+.+......            .....+|--.+..+....+.....+|+||+ .+|+.+|+...+
T Consensus       121 i~sn~~~ih~dg~h~i~~------------~~ds~fG~dK~~vI~~l~e~~e~~fy~GDs-vsDlsaaklsDl  180 (220)
T COG4359         121 IVSNNDYIHIDGQHSIKY------------TDDSQFGHDKSSVIHELSEPNESIFYCGDS-VSDLSAAKLSDL  180 (220)
T ss_pred             EeecCceEcCCCceeeec------------CCccccCCCcchhHHHhhcCCceEEEecCC-cccccHhhhhhh
Confidence            778877765543221111            222344433444455554444457999999 589999998643

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=86.88  E-value=2.1  Score=45.99  Aligned_cols=97  Identities=12%  Similarity=0.080  Sum_probs=60.4

Q ss_pred             ccEEEEeccc----eeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHH
Q 019991           30 FKAWLLDQFG----VLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQY  105 (332)
Q Consensus        30 ~~~vlfDlDG----vL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~  105 (332)
                      ...+.+=.||    .+.-.+++.||+.+.|+.|++.|++++++|+....  ......+++|+... + . .++.+ ....
T Consensus       548 ~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~--~a~~ia~~lgi~~~-~-~-~~p~~-K~~~  621 (741)
T PRK11033        548 KTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPR--AAAAIAGELGIDFR-A-G-LLPED-KVKA  621 (741)
T ss_pred             CEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHcCCCee-c-C-CCHHH-HHHH
Confidence            4555555454    55667899999999999999999999999986532  23455678999743 2 2 33332 2223


Q ss_pred             HhhcCChhhhhcCCeEEEeecCcccchhhhcCC
Q 019991          106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       106 L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                      +++...      +..+..+|.+.-+...++..+
T Consensus       622 v~~l~~------~~~v~mvGDgiNDapAl~~A~  648 (741)
T PRK11033        622 VTELNQ------HAPLAMVGDGINDAPAMKAAS  648 (741)
T ss_pred             HHHHhc------CCCEEEEECCHHhHHHHHhCC
Confidence            333322      235777776544334455443

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=86.39  E-value=1.3  Score=46.19  Aligned_cols=72  Identities=13%  Similarity=0.121  Sum_probs=51.8

Q ss_pred             cEEEEeccceeecCC------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC----ChhHHHHHHHhCCCCccccc-
Q 019991           31 KAWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSR----RASTTIDKLKSLGFDPSLFA-   93 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~----~~~~~~~~L~~lGl~~~~f~-   93 (332)
                      +.|+-|+||||..+.            .-.-|+.++..+++++||++.++|..+.    .++.+.+-++.-|-..+. - 
T Consensus       531 kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd-GP  609 (738)
T KOG2116|consen  531 KIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD-GP  609 (738)
T ss_pred             cEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC-CC
Confidence            689999999999865            3345899999999999999999998652    345666666666665542 2 


Q ss_pred             cccccHHHHH
Q 019991           94 GAITSGELTH  103 (332)
Q Consensus        94 ~Iits~~v~~  103 (332)
                      -+++++-...
T Consensus       610 ViLSPd~lf~  619 (738)
T KOG2116|consen  610 VILSPDSLFA  619 (738)
T ss_pred             EEeCCCcchH
Confidence            3455444443

>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E

Probab=86.32  E-value=7.6  Score=37.55  Aligned_cols=42  Identities=17%  Similarity=0.257  Sum_probs=35.8

Q ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        48 ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .|+..++++.+++.|+.+.+.||+..-+++..+.|.+.|+..
T Consensus        67 ~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~L~~~g~~~  108 (358)
T TIGR02109        67 RPDLVELVAHARRLGLYTNLITSGVGLTEARLDALADAGLDH  108 (358)
T ss_pred             cccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHHHHhCCCCE
Confidence            588999999999999999999998865667778888888753

This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=85.95  E-value=1.2  Score=39.93  Aligned_cols=42  Identities=14%  Similarity=0.109  Sum_probs=32.2

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCC
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG   86 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lG   86 (332)
                      ....+.||+.++++.|+++|++++++||+.+.  .+...++.++
T Consensus        67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~--~i~~il~~~~  108 (214)
T TIGR03333        67 ETAEIREGFREFVAFINEHGIPFYVISGGMDF--FVYPLLEGIV  108 (214)
T ss_pred             hcCcccccHHHHHHHHHHCCCeEEEECCCcHH--HHHHHHHhhC
Confidence            34689999999999999999999999998642  2233455543

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=85.75  E-value=1.2  Score=40.69  Aligned_cols=35  Identities=20%  Similarity=0.285  Sum_probs=30.5

Q ss_pred             eecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCCh
Q 019991           41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA   75 (332)
Q Consensus        41 L~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~   75 (332)
                      ++....+.||+..+++.|+..|+|++++||+++.+
T Consensus        87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~  121 (222)
T KOG2914|consen   87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSAS  121 (222)
T ss_pred             hccccccCCcHHHHHHHHHhCCCCeeEEecCCccc
Confidence            45577889999999999999999999999987543

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=85.16  E-value=1.8  Score=43.15  Aligned_cols=74  Identities=11%  Similarity=0.120  Sum_probs=52.5

Q ss_pred             CccEEEEeccceeecCCcc------------CcCHHHHHHHHHHCCCeEEEEeCCCC----ChhHHHHHHHhCCCCcccc
Q 019991           29 RFKAWLLDQFGVLHDGKKP------------YPGAISTLEMLATTGAKMVVISNSSR----RASTTIDKLKSLGFDPSLF   92 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~------------ipGa~e~L~~L~~~G~~v~~vTN~s~----~~~~~~~~L~~lGl~~~~f   92 (332)
                      ..+.|++|+||||..+.-+            ..|+..+.-.+.++|+++.++|..+-    +++.+....+.-|...+. 
T Consensus       374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpd-  452 (580)
T COG5083         374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPD-  452 (580)
T ss_pred             CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCC-
Confidence            4678999999999986633            46788888888899999999999652    345555666667776553 


Q ss_pred             c-cccccHHHHH
Q 019991           93 A-GAITSGELTH  103 (332)
Q Consensus        93 ~-~Iits~~v~~  103 (332)
                      . .|.++..+.+
T Consensus       453 gpviLspd~t~a  464 (580)
T COG5083         453 GPVILSPDRTMA  464 (580)
T ss_pred             CCEeeccchhhh
Confidence            3 3444444433

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=85.02  E-value=0.12  Score=44.60  Aligned_cols=88  Identities=7%  Similarity=-0.026  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      +++.+.|+.+.+. ..+ |.|+....+...---.+++.  ...|+.. +++.....||.   +.+.++.+|.    ++||
T Consensus        45 Pgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~--~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIiV  118 (162)
T TIGR02251        45 PHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG--GKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVIII  118 (162)
T ss_pred             CCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC--CCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEEE
Confidence            7889999987655 664 77887766544210012211  1133332 55554555665   6677787775    6999


Q ss_pred             eCChhhHHHHHHHcCCcEEEE
Q 019991          246 ESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ||++ .|+.++.++|+....+
T Consensus       119 DD~~-~~~~~~~~NgI~i~~f  138 (162)
T TIGR02251       119 DNSP-YSYSLQPDNAIPIKSW  138 (162)
T ss_pred             eCCh-hhhccCccCEeecCCC
Confidence            9996 6999999999998766

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PHA02597 30

Probab=84.55  E-value=1.4  Score=38.61  Aligned_cols=55  Identities=11%  Similarity=0.189  Sum_probs=34.4

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc---ccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS---LFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~---~f~~Iits~~  100 (332)
                      ....++||+.++|++|++.+ +++++||.+.....  ..++.+|+...   .|+.+++++.
T Consensus        71 ~~~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~--~~~~~~~l~~~f~~~f~~i~~~~~  128 (197)
T PHA02597         71 RYLSAYDDALDVINKLKEDY-DFVAVTALGDSIDA--LLNRQFNLNALFPGAFSEVLMCGH  128 (197)
T ss_pred             HhccCCCCHHHHHHHHHhcC-CEEEEeCCccchhH--HHHhhCCHHHhCCCcccEEEEecc
Confidence            44578999999999999874 67888887654322  22344554321   1345555543

2 hypothetical protein; Provisional

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=84.52  E-value=1.7  Score=38.64  Aligned_cols=47  Identities=9%  Similarity=-0.050  Sum_probs=36.6

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ..|.++...++.+++++|+    +++|||+ .+|+.+.+.+|...+.-|...
T Consensus       145 ~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~vam~Na~~  195 (225)
T TIGR01482       145 PQGVNKGVAVKKLKEKLGIKPGETLVCGDS-ENDIDLFEVPGFGVAVANAQP  195 (225)
T ss_pred             eCCCCHHHHHHHHHHHhCCCHHHEEEECCC-HhhHHHHHhcCceEEcCChhH
Confidence            3355566678889999987    6899999 589999999999766555443

catalyze the same reaction as SPP.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=84.29  E-value=1.8  Score=40.40  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=48.9

Q ss_pred             EEEEeccceeecCC--ccCc--CH--------------------HHHHH---HHHH------CCCeEEEEeCCCC-ChhH
Q 019991           32 AWLLDQFGVLHDGK--KPYP--GA--------------------ISTLE---MLAT------TGAKMVVISNSSR-RAST   77 (332)
Q Consensus        32 ~vlfDlDGvL~~g~--~~ip--Ga--------------------~e~L~---~L~~------~G~~v~~vTN~s~-~~~~   77 (332)
                      -|.||-|+||.+.+  .++.  |.                    ..++.   +|++      .-+++++||..+. ..+.
T Consensus       123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R  202 (264)
T PF06189_consen  123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER  202 (264)
T ss_pred             EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence            58999999999865  2221  11                    12333   3332      2378999998653 3467


Q ss_pred             HHHHHHhCCCCccccccccccHHHHHHHHhhc
Q 019991           78 TIDKLKSLGFDPSLFAGAITSGELTHQYLLRR  109 (332)
Q Consensus        78 ~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~  109 (332)
                      +++.|++||+..+  +..+-+|......|+..
T Consensus       203 vI~TLr~Wgv~vD--EafFLgG~~K~~vL~~~  232 (264)
T PF06189_consen  203 VIRTLRSWGVRVD--EAFFLGGLPKGPVLKAF  232 (264)
T ss_pred             HHHHHHHcCCcHh--HHHHhCCCchhHHHHhh
Confidence            8899999999987  34555555555555544

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=83.65  E-value=2.8  Score=39.94  Aligned_cols=41  Identities=17%  Similarity=0.216  Sum_probs=35.0

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCC-CeEEEEeCCCC
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSR   73 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G-~~v~~vTN~s~   73 (332)
                      +++.+-|=++|    .-+++|...|+++.+++.| ++++++||++.
T Consensus        79 ~pd~vtis~~G----EPTLy~~L~elI~~~k~~g~~~tflvTNgsl  120 (296)
T COG0731          79 EPDHVTISLSG----EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL  120 (296)
T ss_pred             CCCEEEEeCCC----CcccccCHHHHHHHHHhcCCceEEEEeCCCh
Confidence            46677776666    5678999999999999999 79999999987

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=83.49  E-value=3.8  Score=43.49  Aligned_cols=93  Identities=17%  Similarity=0.170  Sum_probs=60.5

Q ss_pred             ccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHHhhcCChhhhh
Q 019991           37 QFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAA  116 (332)
Q Consensus        37 lDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~~~~~~~~  116 (332)
                      +-|++.-.+++.||+.+.++.|++.|+++.++|.....  ......+++|+... +. -.+|.+- ..++++....    
T Consensus       437 ~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~--ta~~iA~~lGI~~v-~a-~~~PedK-~~~v~~lq~~----  507 (675)
T TIGR01497       437 IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRL--TAAAIAAEAGVDDF-IA-EATPEDK-IALIRQEQAE----  507 (675)
T ss_pred             EEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHcCCCEE-Ec-CCCHHHH-HHHHHHHHHc----
Confidence            45777788899999999999999999999999985432  23344567899754 32 3444432 2333332111    


Q ss_pred             cCCeEEEeecCcccchhhhcCCc
Q 019991          117 LGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                       |..+..+|.+.-+...|+..++
T Consensus       508 -g~~VamvGDG~NDapAL~~Adv  529 (675)
T TIGR01497       508 -GKLVAMTGDGTNDAPALAQADV  529 (675)
T ss_pred             -CCeEEEECCCcchHHHHHhCCE
Confidence             5567777766544455665543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria

Probab=82.99  E-value=12  Score=34.33  Aligned_cols=70  Identities=16%  Similarity=0.271  Sum_probs=54.0

Q ss_pred             ccccHHHHhhhcCccEEEEeccceeecCCccCcC------HHHHHHHHHHCCCeEEEEeCCCC---Chh---HHHHHHHh
Q 019991           17 TLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPG------AISTLEMLATTGAKMVVISNSSR---RAS---TTIDKLKS   84 (332)
Q Consensus        17 ~~~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipG------a~e~L~~L~~~G~~v~~vTN~s~---~~~---~~~~~L~~   84 (332)
                      ..+.+++++.  +.|..+..+++++.+.....++      -.+.++.|+..|+.++-+.||..   -.+   +..+.|++
T Consensus        26 ~~~~v~~~l~--~aD~~~~NlE~~v~~~~~~~~~~~~f~~~~~~~~~L~~~G~d~vslANNH~~D~G~~gl~~Tl~~L~~  103 (250)
T PF09587_consen   26 IFEDVKPLLQ--SADLVVANLETPVTDSGQPASGYPHFNAPPEILDALKDAGFDVVSLANNHIFDYGEEGLLDTLEALDK  103 (250)
T ss_pred             HHHHHHHHHh--hCCEEEEEeeecCcCCCCcCCCcceecCCHHHHHHHHHcCCCEEEecCCCCccccHHHHHHHHHHHHH
Confidence            4567888888  7899999999999887665554      57899999999999998888752   223   34556667


Q ss_pred             CCCC
Q 019991           85 LGFD   88 (332)
Q Consensus        85 lGl~   88 (332)
                      .|+.
T Consensus       104 ~gi~  107 (250)
T PF09587_consen  104 AGIP  107 (250)
T ss_pred             CCCc
Confidence            7765

Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=82.66  E-value=4.5  Score=43.01  Aligned_cols=91  Identities=18%  Similarity=0.168  Sum_probs=59.2

Q ss_pred             ccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHHhhcCChhhhh
Q 019991           37 QFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAA  116 (332)
Q Consensus        37 lDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~~~~~~~~  116 (332)
                      +-|++.-.+++.||+.+.++.|++.|+++..+|.....+  ....-+++|++.. + .-.+|.+-. +++++....    
T Consensus       436 ~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~T--A~aIA~elGId~v-~-A~~~PedK~-~iV~~lQ~~----  506 (679)
T PRK01122        436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLT--AAAIAAEAGVDDF-L-AEATPEDKL-ALIRQEQAE----  506 (679)
T ss_pred             EEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHH--HHHHHHHcCCcEE-E-ccCCHHHHH-HHHHHHHHc----
Confidence            557788888999999999999999999999999854322  2233467899754 2 334554433 333322211    


Q ss_pred             cCCeEEEeecCcccchhhhcC
Q 019991          117 LGRSCIHMTWSDRGAISLEGL  137 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~  137 (332)
                       |+.|...|.+--+...|+..
T Consensus       507 -G~~VaMtGDGvNDAPALa~A  526 (679)
T PRK01122        507 -GRLVAMTGDGTNDAPALAQA  526 (679)
T ss_pred             -CCeEEEECCCcchHHHHHhC
Confidence             56677777655444456554

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=82.51  E-value=2.6  Score=37.65  Aligned_cols=46  Identities=11%  Similarity=0.000  Sum_probs=36.3

Q ss_pred             cCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          224 MGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       224 ~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      .|......++.+++.+|+    +++|||+ .+|+.+++.+|+..+.-|-.+
T Consensus       154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~vam~Na~~  203 (230)
T PRK01158        154 PGVNKGTGLKKLAELMGIDPEEVAAIGDS-ENDLEMFEVAGFGVAVANADE  203 (230)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhcCceEEecCccH
Confidence            355567788888899987    6999999 579999999999765555544

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=82.42  E-value=2.9  Score=39.24  Aligned_cols=42  Identities=29%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             CccEEEEeccceeecCC------ccCcCHHHHHHHHHHCCC-eEEEEeC
Q 019991           29 RFKAWLLDQFGVLHDGK------KPYPGAISTLEMLATTGA-KMVVISN   70 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------~~ipGa~e~L~~L~~~G~-~v~~vTN   70 (332)
                      +.+++++|.||||....      .+-++..++|+.|.+... -++++|.
T Consensus        17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSG   65 (266)
T COG1877          17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISG   65 (266)
T ss_pred             cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeC
Confidence            56799999999999854      567778889999988754 4666664

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=81.95  E-value=2.8  Score=45.45  Aligned_cols=54  Identities=19%  Similarity=0.258  Sum_probs=38.9

Q ss_pred             CccEEEEeccceeecCC---------ccCcCHHHHHHHHHHC-CCeEEEEeCCCCChhHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGK---------KPYPGAISTLEMLATT-GAKMVVISNSSRRASTTIDKLKS   84 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~---------~~ipGa~e~L~~L~~~-G~~v~~vTN~s~~~~~~~~~L~~   84 (332)
                      +..++++|.||||..-.         .+-|+..+.|+.|.+. +-.++|+|.  |+.+.+.+.|..
T Consensus       506 ~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSG--R~~~~L~~~~~~  569 (797)
T PLN03063        506 NNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSR--SGKDILDKNFGE  569 (797)
T ss_pred             cCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeC--CCHHHHHHHhCC
Confidence            34799999999998542         2667888899999865 567889996  444445555543

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=81.74  E-value=3.1  Score=36.49  Aligned_cols=40  Identities=13%  Similarity=-0.159  Sum_probs=33.9

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL  263 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t  263 (332)
                      ..|.+.+..++.+++++++    .++|||+ .+|+..++.+|+..
T Consensus       159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~~~~~v  202 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGKRDEILAFGDS-GNDEEMFEVAGLAV  202 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCCce
Confidence            4567788889999999886    6999999 58999999999764

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=81.74  E-value=7.3  Score=42.30  Aligned_cols=115  Identities=17%  Similarity=0.252  Sum_probs=71.9

Q ss_pred             CccEEEEeccceeec----CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHH-
Q 019991           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH-  103 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~----g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~-  103 (332)
                      ..-++++=+||.|.-    .+.+.|++..+++.|++.|++++.+|+.-+.+  ....-++.|++.- |.++.-++.... 
T Consensus       702 g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a--A~svA~~VGi~~V-~aev~P~~K~~~I  778 (951)
T KOG0207|consen  702 GQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA--ARSVAQQVGIDNV-YAEVLPEQKAEKI  778 (951)
T ss_pred             CceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH--HHHHHHhhCcceE-EeccCchhhHHHH
Confidence            456788888887764    77999999999999999999999999854332  2233357887665 455544443221 


Q ss_pred             HHHhhcCChhhhhcCCeEEEeecCcccchhh--hcCCccccC----CCCCccEEEEe
Q 019991          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISL--EGLGLKVVE----NVEEADFILAH  154 (332)
Q Consensus       104 ~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l--~~~g~~~~~----~~~~~~~vv~~  154 (332)
                      +-|++.        |..+..+|.+.-+...|  .+.|+..-.    -.+-+|.|++.
T Consensus       779 k~lq~~--------~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmr  827 (951)
T KOG0207|consen  779 KEIQKN--------GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMR  827 (951)
T ss_pred             HHHHhc--------CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEc
Confidence            224433        34566677654333333  344553321    13567888883

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=81.43  E-value=2.3  Score=38.42  Aligned_cols=43  Identities=30%  Similarity=0.444  Sum_probs=34.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHH-HhCCCCcc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL-KSLGFDPS   90 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L-~~lGl~~~   90 (332)
                      ..+.||+.++++++++.|.+++++|.+..   .+.+.+ +.+|+...
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~---~lv~~ia~~lg~d~~  119 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFT---FLVEPIAERLGIDYV  119 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChH---HHHHHHHHHhCCchh
Confidence            78899999999999999999999998754   233333 56788754

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=81.31  E-value=4.9  Score=42.69  Aligned_cols=92  Identities=14%  Similarity=0.121  Sum_probs=59.2

Q ss_pred             ccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHHhhcCChhhhh
Q 019991           37 QFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAA  116 (332)
Q Consensus        37 lDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~~~~~~~~~  116 (332)
                      +-|++.-.+++.||+.+.+++|++.|+++..+|.....+  ....-+++|+... |. -++|.+-.. ++++....    
T Consensus       432 ~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~T--A~aIA~elGI~~v-~A-~~~PedK~~-iV~~lQ~~----  502 (673)
T PRK14010        432 ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELT--AATIAKEAGVDRF-VA-ECKPEDKIN-VIREEQAK----  502 (673)
T ss_pred             EEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHH--HHHHHHHcCCceE-Ec-CCCHHHHHH-HHHHHHhC----
Confidence            446777788999999999999999999999999854322  2334467899754 33 345554333 33322111    


Q ss_pred             cCCeEEEeecCcccchhhhcCC
Q 019991          117 LGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                       |+.|...|.+--+...|+..+
T Consensus       503 -G~~VaMtGDGvNDAPALa~AD  523 (673)
T PRK14010        503 -GHIVAMTGDGTNDAPALAEAN  523 (673)
T ss_pred             -CCEEEEECCChhhHHHHHhCC
Confidence             566777776554444565543

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=80.25  E-value=2.1  Score=39.50  Aligned_cols=67  Identities=27%  Similarity=0.284  Sum_probs=48.7

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~  102 (332)
                      +..-.||-.+  -......+|..++++.||+.|..+.++||-....   ...+..+|+... |+.++.|.++-
T Consensus        99 ~~~~~~s~~~--~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~---~~~l~~~~l~~~-fD~vv~S~e~g  165 (237)
T KOG3085|consen   99 FSFRLFSTFA--PSAWKYLDGMQELLQKLRKKGTILGIISNFDDRL---RLLLLPLGLSAY-FDFVVESCEVG  165 (237)
T ss_pred             hhhheecccc--ccCceeccHHHHHHHHHHhCCeEEEEecCCcHHH---HHHhhccCHHHh-hhhhhhhhhhc
Confidence            3445566655  3445678899999999999999999999965322   245678888866 78888876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	332
2hx1_A	284	Crystal Structure Of Possible Sugar Phosphatase, Ha		4e-06
2cfs_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		4e-05
2oyc_A	306	Crystal Structure Of Human Pyridoxal Phosphate Phos		5e-05
2cfr_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		5e-05

>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii Atcc 33406 At 2.10 A Resolution Length = 284

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
           ++K    D FGVL       PG  +T + L   G    +++N + R+   + D    LG 
Sbjct: 13  KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGL 72
Query: 88  DPSLFAGAITSGELTHQYL-LRRDDAWFAALGRS-CIHMTWSDRGAISLEGLGLKVVE-- 143
                   I+SG +T +Y+ L+ D    A LG +   +   SD     ++ L +  ++  
Sbjct: 73  FSITADKIISSGXITKEYIDLKVDGGIVAYLGTANSANYLVSD----GIKXLPVSAIDDS 128
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVT-VEARA 202
           N+ E + ++    EG              DL K + +   + IP +VAN D    +    
Sbjct: 129 NIGEVNALVLLDDEGFNW---------FHDLNKTVNLLRKRTIPAIVANTDNTYPLTKTD 179
Query: 203 LRVMPGTLASKFEK-LGGEVRWMGKPD 228
           + +  G +A+  E  LG      GKPD
Sbjct: 180 VAIAIGGVATXIESILGRRFIRFGKPD 206

>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDA 112
                  LF+ A+ +  L  Q L    DA
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDA 108

>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDA 112
                  LF+ A+ +  L  Q L    DA
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDA 108

>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
           R +  L D  GVL +G++  PGA   LE LA  G   + +SN+SRRA   +  +   LGF
Sbjct: 20  RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88  D----PSLFAGAITSGELTHQYLLRRDDA 112
                  LF+ A+ +  L  Q L    DA
Sbjct: 80  GGLRAEQLFSSALCAARLLRQRLPGPPDA 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	332
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	7e-15
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	7e-11
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	7e-10
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	1e-09
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	2e-09
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	2e-09
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	2e-09
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	7e-09
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	7e-09
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	1e-08
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	2e-07
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	2e-06
2zg6_A	220	Putative uncharacterized protein ST2620, probable	7e-06
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	9e-06
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	9e-06
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	1e-05
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	2e-05
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	2e-05
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	4e-05
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	5e-05
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	2e-04
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	4e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	5e-04
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	5e-04
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	7e-04
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	8e-04

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} Length = 284

 Score = 72.7 bits (179), Expect = 7e-15
 Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 16/218 (7%)

Query: 17  TLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRA 75
            +   + +    ++K    D FGVL       PG  +T + L   G    +++N +SR  
Sbjct: 3   QIESFKSLLP--KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSP 60

Query: 76  STTIDKLKSLGFDPSLFAGAITSGELTHQYL-LRRDDAWFAALGRSCIHMTWSDRGAISL 134
               D    LG         I+SG +T +Y+ L+ D    A LG +         G I +
Sbjct: 61  EQLADSYHKLGLFSITADKIISSGMITKEYIDLKVDGGIVAYLGTANSANYLVSDG-IKM 119

Query: 135 EGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPD 194
             +      N+ E + ++    EG              DL K + +   + IP +VAN D
Sbjct: 120 LPVSAIDDSNIGEVNALVLLDDEGFNWF---------HDLNKTVNLLRKRTIPAIVANTD 170

Query: 195 YVT-VEARALRVMPGTLASKFEK-LGGEVRWMGKPDKL 230
               +    + +  G +A+  E  LG      GKPD  
Sbjct: 171 NTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQ 208

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 60.6 bits (148), Expect = 7e-11
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 25  AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLK 83
           A  R  KA L+D  G LH      PGA   L+ L  T   +  ++N +       +++LK
Sbjct: 2   AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLK 61

Query: 84  SLGFDPSLFAGA---ITSGELTHQYLLRRDDA 112
            L F+           TS       + ++   
Sbjct: 62  KLEFE----ISEDEIFTSLTAARNLIEQKQVR 89

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 50/225 (22%), Positives = 73/225 (32%), Gaps = 29/225 (12%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
            R +  L D  GVL +G++  PGA   LE LA  G   + +SN S R       +   LG
Sbjct: 19  GRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLG 78

Query: 87  FDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
           F         +S     + L +R      A G   +         +  EGL       + 
Sbjct: 79  FGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV---------LGGEGL----RAELR 125

Query: 147 EADFILAHGTEGMGLPSGDV--------RPMSLQDLEKILEICASKKIPMVVANPDYVTV 198
            A   LA         +  V           S   L +        +  +V  + D    
Sbjct: 126 AAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHP 185

Query: 199 EARALRVMPGT--LASKFEKLGG-EVRWMGKPDKLWATLFTMILR 240
            +      PGT  LA+  E   G +   +GKP      +F  I  
Sbjct: 186 LSDG-SRTPGTGSLAAAVETASGRQALVVGKPSPY---MFECITE 226

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
           + +K +L+D  G +++G +    A   +  L   G   + ++N SSR      DKL S  
Sbjct: 4   KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFD 63

Query: 87  FDPSLFAGA---ITSGELTHQYLLRR 109
                 A      T+   T Q++ ++
Sbjct: 64  IP----ATEEQVFTTSMATAQHIAQQ 85

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250

 Score = 56.7 bits (138), Expect = 2e-09
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
            K  + D  GVL       PGA   L  +   G  +V+++N  S+      ++  + G D
Sbjct: 3   IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62

Query: 89  PSLFAGA---ITSGELTHQYLLRRDDA 112
                      TS   T  +L R++  
Sbjct: 63  ----VPDSVFYTSAMATADFLRRQEGK 85

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
              K +++D  GV+     P P  +  ++ L   G K++ +SN S+R     +++L+S G
Sbjct: 6   PDKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFG 65

Query: 87  FDPSLFAGA---ITSGELTHQYLLRR 109
            +     G    + +   T +++ R 
Sbjct: 66  LE----VGEDEILVATYATARFIARE 87

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 8/87 (9%)

Query: 27  TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSL 85
           +  +K +L+D  G ++ GK   P     +E L   G   ++++N ++R   +  + L+  
Sbjct: 2   SLAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGF 61

Query: 86  GFDPSLFAGA---ITSGELTHQYLLRR 109
             +           T+   T  Y+   
Sbjct: 62  NVE----TPLETIYTATMATVDYMNDM 84

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 28  RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLG 86
            + + ++LD  G  +      PG++  LE L     + V  +N SS  A   + KL+++G
Sbjct: 15  DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMG 74

Query: 87  FDPSLFAGA---ITSGELTHQYLLRR 109
            D          +TSGE+T +++L+R
Sbjct: 75  VD----VPDDAVVTSGEITAEHMLKR 96

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 5e-09
 Identities = 61/384 (15%), Positives = 113/384 (29%), Gaps = 107/384 (27%)

Query: 10  NDPHLFQTLNGLRHIAETRRFKAWLL----DQFGVLH----DGKKPYPGAISTLEMLATT 61
           ND  +F   N  R +    + +  LL     +  ++      GK       + + +    
Sbjct: 121 NDNQVFAKYNVSR-LQPYLKLRQALLELRPAKNVLIDGVLGSGK-------TWVALDVCL 172

Query: 62  GAKMVVISN---------SSRRASTTIDKLKSL--GFDPSLFAGAITSGELTH-----QY 105
             K+    +         +     T ++ L+ L    DP+  + +  S  +       Q 
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 106 LLRR--------------DDAW----FAALGRSC-IHMTWSDRGAISLEGLGLKVVENVE 146
            LRR               +      + A   SC I +T   +              +++
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP--MVVANPDYVTVEARALR 204
                L    E   L            L K L+ C  + +P  ++  NP  +++ A ++R
Sbjct: 293 HHSMTLTP-DEVKSL------------LLKYLD-CRPQDLPREVLTTNPRRLSIIAESIR 338

Query: 205 VMPGT---------------LASKFEKLG-GEVRWMGK-----PD----------KLWAT 233
               T               + S    L   E R M       P            +W  
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398

Query: 234 LFTMILRVQMQLESSPYSLLEGSMQLNLDLTVMEKLQIYLLFKLLYLNMMHIHRMCCHHF 293
           +    + V +  +   YSL+E         + +    IYL  K+   N   +HR    H+
Sbjct: 399 VIKSDVMVVVN-KLHKYSLVEK----QPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453

Query: 294 RGRLILDLKNAIFFLTE---FFCH 314
                 D  + +        F+ H
Sbjct: 454 NIPKTFD-SDDLIPPYLDQYFYSH 476

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 4e-06
 Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 102/359 (28%)

Query: 3   AKCSVQSNDPHLFQTL-NGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLE----- 56
           ++    SN      ++   LR + +++ ++  LL    VL + +                
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNVQNA-----KAWNAFNLS 265

Query: 57  --MLATTGAKMVV-ISNSSRRASTTIDKLKSLGFDP----SLFAGA--ITSGELTHQ--- 104
             +L TT  K V    +++     ++D   S+   P    SL          +L  +   
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHH-SMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 105 ---YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGL 161
                L    +  A   R  +  TW D      + +    +  + E+   L        L
Sbjct: 325 TNPRRL----SIIAESIRDGLA-TW-DN----WKHVNCDKLTTIIESS--LNV------L 366

Query: 162 PSGDVRPMSLQDLEKILEICASKKIPMVV-----ANPDYVTVEARALRVMPGTLASKFEK 216
              + R M    L  +     S  IP ++      +     V           + +K  K
Sbjct: 367 EPAEYRKM-FDRLS-VFP--PSAHIPTILLSLIWFDVIKSDVM---------VVVNKLHK 413

Query: 217 LGGEVRWMGKPDKLWATLFTMILRVQMQLESSP---------YSLL-----EGSMQLNLD 262
                +    P +   ++ ++ L ++++LE+           Y++      +  +   LD
Sbjct: 414 YSLVEKQ---PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470

Query: 263 ----------LTVMEKLQIYLLFKLLYLNMMHIHRMCCH-----HFRGR---LILDLKN 303
                     L  +E  +   LF++++L+   + +   H     +  G     +  LK 
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} Length = 263

 Score = 54.8 bits (133), Expect = 7e-09
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 31  KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDP 89
            A + D  GVL+ G +  PG    +E L   G     ++N S++      +KL  +G D 
Sbjct: 2   VAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID- 60

Query: 90  SLFAGA---ITSGELTHQYLLRR 109
                +   ITSG  T  Y+ + 
Sbjct: 61  ---VSSSIIITSGLATRLYMSKH 80

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 12/91 (13%)

Query: 28  RRFKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKL 82
              +  LLD  GVL+     G     G++  +  L  +  K+   +N S+   +  + +L
Sbjct: 10  AGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQL 69

Query: 83  KSLGFDPSLFAGA---ITSGELTHQYLLRRD 110
           + LGFD                  Q L  R 
Sbjct: 70  QRLGFD----ISEQEVTAPAPAACQILKERG 96

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* Length = 352

 Score = 54.4 bits (130), Expect = 1e-08
 Identities = 39/251 (15%), Positives = 68/251 (27%), Gaps = 39/251 (15%)

Query: 18  LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRAS 76
           + G R    T +  A+  D  GVL  GKKP  GA   L++L       ++++N       
Sbjct: 1   MIGKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSER 60

Query: 77  TTIDKL-KSLGFDPSLFAGAITSGELTHQYLLRRDDAWF-------AALGRSCIHMTWSD 128
              + +   L  D S     I S       + +                           
Sbjct: 61  ARTEFISSKLDVDVSP-LQIIQSHTPYKSLVNKYSRILAVGTPSVRGVAEGYGFQDVVHQ 119

Query: 129 RGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSL------QDLEKILEICA 182
              +             +E     +     +     D   +         D++ I +   
Sbjct: 120 TDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLVFNDPHDWAADIQIISDAIN 179

Query: 183 S---------------KKIPMVVANPDYVTVEAR--------ALRVMPGTLASKFEKLGG 219
           S                 IP+  +N D +             A R++   L  +      
Sbjct: 180 SENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPL 239

Query: 220 EVRWMGKPDKL 230
           +   +GKP KL
Sbjct: 240 QDYTLGKPTKL 250

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 27  TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKL-KS 84
           +  ++ +L+D  G ++ GK+P P     +E L       + ++N +++   T   +L   
Sbjct: 2   SLDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANE 61

Query: 85  LGFDPSLFAGA---ITSGELTHQYLLRR 109
                     A    T+   T  Y+   
Sbjct: 62  FDIH----VPASLVYTATLATIDYMKEA 85

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 6/90 (6%)

Query: 13  HLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-S 71
           H+   +    +     R+    LD +  +         A  TLE +   G K  ++SN +
Sbjct: 5   HVIWDMGETLNTVPNTRYDHHPLDTYPEV----VLRKNAKETLEKVKQLGFKQAILSNTA 60

Query: 72  SRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
           +         L + G     F     S   
Sbjct: 61  TSDTEVIKRVLTNFGIID-YFDFIYASNSE 89

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 16/105 (15%)

Query: 8   QSNDPHLFQTLNGLRHIAETRRFKAWL-----------LDQFGVLHDGKKPYPGAISTLE 56
           ++     +   +GL H+ + + F   L           L +  +       Y   +  LE
Sbjct: 47  KAMGMINYPDEDGLEHV-DPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLE 105

Query: 57  MLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
            L + G K+ ++SN+S R       L+        F     S E+
Sbjct: 106 GLKSNGYKLALVSNASPR---VKTLLEKFDLKK-YFDALALSYEI 146

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 2/71 (2%)

Query: 32  AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFDPS 90
                +  +  D      G    L+ +   G K  VI N      S T   L+  G    
Sbjct: 85  KRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME- 143

Query: 91  LFAGAITSGEL 101
                  + E+
Sbjct: 144 FIDKTFFADEV 154

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 46  KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ 104
           +  PGA   L  L   G ++ +I++ +       +K+  L  D   F   I S     +
Sbjct: 94  REVPGARKVLIRLKELGYELGIITDGNPV--KQWEKILRLELDD-FFEHVIISDFEGVK 149

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 27/132 (20%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
            +  ++D  GVL    +      + L      G   V++SN           ++ L  + 
Sbjct: 2   MRGLIVDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA--APIRELETNG 59

Query: 90  SLFAGAITSGELTH--------QYLLRR-----DDAWF-----------AALGRSCIHMT 125
            +    + SGEL          Q           D                 G   ++  
Sbjct: 60  -VVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ 118

Query: 126 WSDRGAISLEGL 137
             DR  + + GL
Sbjct: 119 QFDRAVVEIVGL 130

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 25  AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS 84
            +  R        +  L       PGA+  LE L     K  + ++      T    LK+
Sbjct: 70  EQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGID--TATINLKA 127

Query: 85  LGFDPSLFAGAITSGELTH 103
           L  D       +T  ++++
Sbjct: 128 LKLDI-NKINIVTRDDVSY 145

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 9/90 (10%)

Query: 19  NGLRHIAET-----RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
                  ET       F     +      +    + G    LE ++  G +  ++S+ + 
Sbjct: 50  VSTPFAIETFAPNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRND 109

Query: 74  RASTTIDKLKSLGFDPSLFAGAITSGELTH 103
           +    ++ L+        F   +TS     
Sbjct: 110 QV---LEILEKTSIAA-YFTEVVTSSSGFK 135

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 42  HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL 101
               +   GA  TL    T G ++ VISN  RR       L  LG     F   +TS   
Sbjct: 102 PCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR---LEGILGGLGLRE-HFDFVLTSEAA 157

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 42.9 bits (102), Expect = 5e-05
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 12  PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISN 70
              F  L G+    +   F+     +  +  +     +P  + TL  L   G ++ +IS 
Sbjct: 54  EESFSILTGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIIST 113

Query: 71  SSRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
             R    +   L++   D   F   I   ++TH
Sbjct: 114 KYRFRILSF--LRNHMPDD-WFDIIIGGEDVTH 143

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 21  LRHIA-----ETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA 75
           L H+A     E+    AWLL+    L  G +P PGA+  +  LA  G ++ +++ ++R  
Sbjct: 40  LTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNAREL 99

Query: 76  STTIDKLKSLGFDPSLFAGAITSG 99
                 L+++G     FA A   G
Sbjct: 100 --AHVTLEAIGLAD-CFAEADVLG 120

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 20/92 (21%), Positives = 29/92 (31%), Gaps = 5/92 (5%)

Query: 12  PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS 71
           P    TL G R    T  ++  L        D      GAI  L+ L      M ++SN 
Sbjct: 71  PKYLITLLGKRWKEATILYENSLEKS--QKSDNFMLNDGAIELLDTLKENNITMAIVSNK 128

Query: 72  SRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
           +        ++         F   I SG+   
Sbjct: 129 NGER--LRSEIHHKNLTH-YFDSIIGSGDTGT 157

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 40.5 bits (94), Expect = 5e-04
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 9/90 (10%)

Query: 13  HLFQTL-NGLRHIAETRRFKAWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVIS 69
            ++Q    G +   +  +  A    + G ++     +P       L  L   G ++ + +
Sbjct: 179 EVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIAT 238

Query: 70  NSSRRASTTIDKLKSLG----FDPSLFAGA 95
                   T+   ++LG    F+    A A
Sbjct: 239 GRPYT--ETVVPFENLGLLPYFEADFIATA 266

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 46  KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH 103
              PGA   L     +G +  + ++    A      LK LG +   F   +TS     
Sbjct: 85  VLMPGAREVLAWADESGIQQFIYTHKGNNA---FTILKDLGVES-YFTEILTSQSGFV 138

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 20/89 (22%), Positives = 24/89 (26%), Gaps = 3/89 (3%)

Query: 12  PHLFQTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS 71
             +   L           F   L  +F     G     GA  TL  L   G    + SNS
Sbjct: 76  DGVLAYLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNS 135

Query: 72  SRRASTTIDKLKSLGFDPSLFAGAITSGE 100
            R       KL+  G    L    I    
Sbjct: 136 ERGRLHL--KLRVAGLTE-LAGEHIYDPS 161

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 38  FGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97
             +     + YP  +  L+ L      + +I++S       +  L +LG    LF    T
Sbjct: 92  LRMSQRYGELYPEVVEVLKSLK-GKYHVGMITDSD--TEQAMAFLDALGIKD-LFDSITT 147

Query: 98  SGEL 101
           S E 
Sbjct: 148 SEEA 151

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	332
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	100.0
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.97
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.97
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.97
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.96
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.96
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.96
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.95
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.95
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.93
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.88
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.87
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.68
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.67
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.66
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.62
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.59
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.58
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.56
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.56
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.55
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.54
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.54
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.52
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.51
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.51
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.5
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.5
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.47
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.47
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.46
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.45
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.45
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.45
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.45
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.45
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.45
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.44
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.44
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.44
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.44
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.44
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.43
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.42
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.42
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.42
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.4
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.4
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.39
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.39
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.38
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.38
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.37
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.37
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.37
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.36
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.35
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.35
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.35
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.34
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.34
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.33
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.33
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.33
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.32
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.3
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.28
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.28
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.27
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.27
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.26
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.23
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.21
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.19
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.19
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.16
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.15
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.13
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.11
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.1
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.08
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	98.99
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.99
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.98
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.98
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.96
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.95
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.9
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.88
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.87
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	98.86
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.83
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.8
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.8
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.78
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.77
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.77
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.75
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.74
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.73
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.72
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.71
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.7
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.68
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.67
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.67
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.65
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.65
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.64
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.63
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.61
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.6
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.6
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.53
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.51
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.48
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.46
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.38
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.38
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.37
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.33
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.32
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.28
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	97.61
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.27
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.26
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.24
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.2
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.2
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.19
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	98.18
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.15
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.12
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.1
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.07
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.06
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.99
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.88
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.85
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.85
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.85
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.73
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.68
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	97.66
3mmz_A	176	Putative HAD family hydrolase; structural genomics	97.66
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.63
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.43
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.41
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.4
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.39
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.38
3mn1_A	189	Probable YRBI family phosphatase; structural genom	97.37
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.21
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	97.17
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	97.16
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	97.12
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.1
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	97.08
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.04
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	96.96
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	96.93
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.93
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	96.89
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	96.8
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	96.79
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.66
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	96.53
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	96.51
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	96.49
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	96.48
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.44
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	96.41
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	96.4
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.35
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	96.32
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	96.18
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	96.17
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	96.17
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	95.06
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	96.02
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	95.98
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	95.98
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	95.96
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	95.92
2zg6_A	220	Putative uncharacterized protein ST2620, probable	95.87
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	95.86
2hsz_A	243	Novel predicted phosphatase; structural genomics,	95.82
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	95.8
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	95.65
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	95.62
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	95.46
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	95.41
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	95.37
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	95.33
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	95.29
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	95.29
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	95.25
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	95.22
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	95.18
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	95.06
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	95.01
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	94.97
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	94.83
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	94.78
1te2_A	226	Putative phosphatase; structural genomics, phospha	94.76
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	94.72
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	94.62
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	94.47
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	94.47
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	94.43
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	94.4
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	94.26
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	94.24
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	94.21
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	94.2
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	94.07
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	94.01
3fvv_A	232	Uncharacterized protein; unknown function, structu	93.93
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	93.88
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	93.88
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	93.81
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	93.77
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	93.77
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	93.66
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	93.56
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	93.13
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	92.88
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	91.86
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	91.83
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	91.74
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	91.68
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	90.54
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	90.4
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	90.36
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	90.1
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	89.65
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	89.62
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	88.85
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	88.7
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	88.37
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	87.41
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	84.84
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	83.74
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	83.67
4gxt_A	385	A conserved functionally unknown protein; structur	82.95
2kln_A	130	Probable sulphate-transport transmembrane protein;	80.53
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	80.41
3zxn_A	123	RSBS, anti-sigma-factor antagonist (STAS) domain p	80.12

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=100.00  E-value=1e-34  Score=279.70  Aligned_cols=219  Identities=21%  Similarity=0.240  Sum_probs=180.1

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHH-hCCCCccccccccccHHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~-~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      +.++|+||+|||||++..++||+.++|+.|++.|++++++|||+ ++.+++.++|+ .+|++..+ ++|++|..+++.++
T Consensus        12 ~~~~~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~-~~i~ts~~~~~~~~   90 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSP-LQIIQSHTPYKSLV   90 (352)
T ss_dssp             CCEEEEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCG-GGEECTTGGGGGGT
T ss_pred             cCCEEEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCCh-hhEeehHHHHHHHH
Confidence            57899999999999999999999999999999999999999997 46678889998 69999885 99999999998877


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCcccc----------------------------CC---C--CCccEEEE
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVV----------------------------EN---V--EEADFILA  153 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~----------------------------~~---~--~~~~~vv~  153 (332)
                      . .        ++++|++|.... ..++++.|++.+                            ++   .  ...++|++
T Consensus        91 ~-~--------~~~v~viG~~~l-~~~l~~~G~~~v~~~~d~~~~~~~~~p~~~l~~ee~~~~~d~ipD~~~~~v~AVvv  160 (352)
T 3kc2_A           91 N-K--------YSRILAVGTPSV-RGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLV  160 (352)
T ss_dssp             T-T--------CSEEEEESSTTH-HHHHHHHTCSEEEEHHHHHHHCGGGCTTCCCCHHHHHHHCCCCTTTTTSCCCEEEE
T ss_pred             h-c--------CCEEEEECCHHH-HHHHHhCCCeEecchhHhhhhcccccccccCCHHHHhhhccCcccccccCCCEEEE
Confidence            4 2        467888886432 346777776533                            00   1  34578888


Q ss_pred             ecCCCCCCCCCCCcccCHHHHHHHHHHHHh---------------CCCcEEEecCCccceeccc-eecCCChhHHHHHH-
Q 019991          154 HGTEGMGLPSGDVRPMSLQDLEKILEICAS---------------KKIPMVVANPDYVTVEARA-LRVMPGTLASKFEK-  216 (332)
Q Consensus       154 ~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~---------------~g~~lIaTN~D~~~~~~~~-~~l~~G~i~~~~e~-  216 (332)
                                +.|+...|.+++.+.+++..               +++++++||+|..++...+ +++++|++.++++. 
T Consensus       161 ----------~~Dp~d~~~~lq~~~d~L~s~~G~~~~~~~~~~~~~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~  230 (352)
T 3kc2_A          161 ----------FNDPHDWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRL  230 (352)
T ss_dssp             ----------CSCCSCHHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHH
T ss_pred             ----------eCCCcchHHHHHHHHHHHHhcCCCcCcccccccCCCCCeEEEECCCcccccCCCCcccCchHHHHHHHHH
Confidence                      56788889999999998752               5789999999999998766 47899997666655 


Q ss_pred             ---h-cCc--ccccCCCCHHHHHHHHHHhC-----------------------------C--eEEEeCChhhHHHHHHHc
Q 019991          217 ---L-GGE--VRWMGKPDKLWATLFTMILR-----------------------------V--QMQLESSPYSLLEGSMQL  259 (332)
Q Consensus       217 ---~-g~e--~~~~GKP~p~if~~Al~~lg-----------------------------~--~lmIGDs~~~DI~gA~~a  259 (332)
                         + |++  +..+|||+|.+|+.|+++++                             .  .+||||++.+||+||+++
T Consensus       231 y~~~tg~~~~~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~a  310 (352)
T 3kc2_A          231 YLELNGEPLQDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNY  310 (352)
T ss_dssp             HHHHHSSCCCCEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHH
T ss_pred             HHHhcCCCCCceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHc
Confidence               4 665  47899999999999977641                             1  599999998999999999


Q ss_pred             CCcEEEEec
Q 019991          260 NLDLTVMEK  268 (332)
Q Consensus       260 G~~ti~~~~  268 (332)
                      ||+++|+..
T Consensus       311 G~~ti~V~~  319 (352)
T 3kc2_A          311 GWNSCLVKT  319 (352)
T ss_dssp             TCEEEECSS
T ss_pred             CCEEEEEcc
Confidence            999999965

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.97  E-value=5.4e-31  Score=244.00  Aligned_cols=227  Identities=21%  Similarity=0.353  Sum_probs=185.0

Q ss_pred             cccHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCC-ccccccc
Q 019991           18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFD-PSLFAGA   95 (332)
Q Consensus        18 ~~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~-~~~f~~I   95 (332)
                      .+++.++++  ++++|+||+||||+++..++|++.++|++++++|++++++||++ ++...+.+.++++|+. .. ++.+
T Consensus         4 ~~~~~~~~~--~~k~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~-~~~i   80 (284)
T 2hx1_A            4 IESFKSLLP--KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSIT-ADKI   80 (284)
T ss_dssp             BCCHHHHGG--GCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCC-GGGE
T ss_pred             HHHHHHHHh--cCCEEEEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCC-HhhE
Confidence            456889999  89999999999999999999999999999999999999999976 6677888999999998 77 4899


Q ss_pred             cccHHHHHHHHhhcCChhhhhcCCeEE-EeecCcccchhhhcCCccccC----C---CCCccEEEEecCCCCCCCCCCCc
Q 019991           96 ITSGELTHQYLLRRDDAWFAALGRSCI-HMTWSDRGAISLEGLGLKVVE----N---VEEADFILAHGTEGMGLPSGDVR  167 (332)
Q Consensus        96 its~~v~~~~L~~~~~~~~~~~G~~v~-~~g~~~~~~~~l~~~g~~~~~----~---~~~~~~vv~~~~~~~~~~~g~d~  167 (332)
                      +++..+..+|+++..+      + +++ ++|.... ...+++.|++...    +   .+.++++++          +.+.
T Consensus        81 i~~~~~~~~~l~~~~~------~-~v~~~lg~~~l-~~~l~~~G~~~~~~~~~~~~~~~~~~avv~----------~~~~  142 (284)
T 2hx1_A           81 ISSGMITKEYIDLKVD------G-GIVAYLGTANS-ANYLVSDGIKMLPVSAIDDSNIGEVNALVL----------LDDE  142 (284)
T ss_dssp             EEHHHHHHHHHHHHCC------S-EEEEEESCHHH-HHTTCBTTEEEEEGGGCCTTTGGGEEEEEE----------CCSS
T ss_pred             EcHHHHHHHHHHhhcC------C-cEEEEecCHHH-HHHHHHCCCeeccCCCCCcccCCCCCEEEE----------eCCC
Confidence            9999999999987643      4 677 6665321 3467788886541    1   135677777          3445


Q ss_pred             cc----CHHHHHHHHHHHHhCCCcEEEecCCccce-eccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHh--
Q 019991          168 PM----SLQDLEKILEICASKKIPMVVANPDYVTV-EARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMIL--  239 (332)
Q Consensus       168 ~~----~y~~l~~~l~~l~~~g~~lIaTN~D~~~~-~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~l--  239 (332)
                      .+    +|+++.+   .|+++|+++|+||++...+ ...+..+..+++..+|+.+ +++....|||+|.+|+.+++++  
T Consensus       143 ~~~~~~~~~~l~~---~L~~~g~~~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~  219 (284)
T 2hx1_A          143 GFNWFHDLNKTVN---LLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQ  219 (284)
T ss_dssp             SSCHHHHHHHHHH---HHHHCCCCEEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHT
T ss_pred             CcCccccHHHHHH---HHhcCCCeEEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhh
Confidence            55    4555554   5668899999999999877 3322345677899999996 8888899999999999999999  


Q ss_pred             --CC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          240 --RV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       240 --g~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                        |+    .+||||++.+||++|+++||+++|+..
T Consensus       220 ~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  254 (284)
T 2hx1_A          220 KMEISKREILMVGDTLHTDILGGNKFGLDTALVLT  254 (284)
T ss_dssp             TSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred             ccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence              98    699999988999999999999999974

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.97  E-value=1.3e-30  Score=239.21  Aligned_cols=220  Identities=18%  Similarity=0.227  Sum_probs=181.7

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHHHHHHhh
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR  108 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~~  108 (332)
                      +++|+||+||||+++..++|++.++|++|++.|++++++||++. ....+.++|+++|++... +.++++..+...|+++
T Consensus         1 ik~i~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~-~~i~~~~~~~~~~l~~   79 (263)
T 1zjj_A            1 MVAIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSS-SIIITSGLATRLYMSK   79 (263)
T ss_dssp             CEEEEEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCG-GGEEEHHHHHHHHHHH
T ss_pred             CeEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hhEEecHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999874 567788999999998874 8999999999999987


Q ss_pred             cCChhhhhcCCeEEEeecCcccchhhhcCCccccC-CC------CCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHH
Q 019991          109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE-NV------EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEIC  181 (332)
Q Consensus       109 ~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~-~~------~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l  181 (332)
                      ...      +.+++++|.... ..++++.|++... ..      .+++++++          |++....|+++.++++.|
T Consensus        80 ~~~------~~~v~viG~~~l-~~~l~~~G~~~~~~~~~~~~~~~~~~~v~~----------g~~~~~~~~~~~~~l~~L  142 (263)
T 1zjj_A           80 HLD------PGKIFVIGGEGL-VKEMQALGWGIVTLDEARQGSWKEVKHVVV----------GLDPDLTYEKLKYATLAI  142 (263)
T ss_dssp             HSC------CCCEEEESCHHH-HHHHHHHTSCBCCHHHHHTTGGGGCCEEEE----------CCCTTCBHHHHHHHHHHH
T ss_pred             hCC------CCEEEEEcCHHH-HHHHHHcCCeeccCCcccccccCCCCEEEE----------ecCCCCCHHHHHHHHHHH
Confidence            654      457777775322 3467777876542 10      12778887          567888999999999988


Q ss_pred             HhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEEeCChhhHHHHHHH
Q 019991          182 ASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQLESSPYSLLEGSMQ  258 (332)
Q Consensus       182 ~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmIGDs~~~DI~gA~~  258 (332)
                      + +|.++|+||++..++.........|++..+|+.+ ++++...|||+|.+|+.+++++..  ++||||++.+||++|++
T Consensus       143 ~-~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~  221 (263)
T 1zjj_A          143 R-NGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREMFPGEELWMVGDRLDTDIAFAKK  221 (263)
T ss_dssp             H-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHSTTCEEEEEESCTTTHHHHHHH
T ss_pred             H-CCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHhCCcccEEEECCChHHHHHHHHH
Confidence            7 8999999999998875443333337899999985 888889999999999999998332  69999998899999999


Q ss_pred             cCCcEEEEec
Q 019991          259 LNLDLTVMEK  268 (332)
Q Consensus       259 aG~~ti~~~~  268 (332)
                      +|++++|+..
T Consensus       222 aG~~~i~v~~  231 (263)
T 1zjj_A          222 FGMKAIMVLT  231 (263)
T ss_dssp             TTCEEEEESS
T ss_pred             cCCeEEEECC
Confidence            9999999964

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.97  E-value=2.6e-29  Score=230.53  Aligned_cols=219  Identities=16%  Similarity=0.252  Sum_probs=184.5

Q ss_pred             cCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      |++++|+||+||||+++...+|++.++|++++++|++++++||++ ++...+...|+.+|+.... +.++++......++
T Consensus         3 m~~kli~~DlDGTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~l   81 (264)
T 3epr_A            3 LAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPL-ETIYTATMATVDYM   81 (264)
T ss_dssp             CCCCEEEECCBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCCEEEEeCCCceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hheecHHHHHHHHH
Confidence            369999999999999999999999999999999999999999986 6777889999999999874 88999999999998


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      ++...      +..++..+.... ...+++.|+.+..  ..++.++.          +.+..++|+++.++++.+ .++.
T Consensus        82 ~~~~~------~~~~~~~~~~~l-~~~l~~~g~~~~~--~~~~~v~~----------~~~~~~~~~~~~~~~~~l-~~~~  141 (264)
T 3epr_A           82 NDMNR------GKTAYVIGEEGL-KKAIADAGYVEDT--KNPAYVVV----------GLDWNVTYDKLATATLAI-QNGA  141 (264)
T ss_dssp             HHHTC------CSEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHHH-HTTC
T ss_pred             HHhCC------CCeEEEECCHHH-HHHHHHcCCcccC--CcCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCC
Confidence            77643      456666554221 2367777876643  56778877          455778999999999875 7788


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      +++++|+|...+......+..+.+..+|+.+ +.++...|||+|.+|+.+++++|+    ++||||++.+||++|+++|+
T Consensus       142 ~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~  221 (264)
T 3epr_A          142 LFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDI  221 (264)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             eEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCC
Confidence            9999999998776555456677899999985 888999999999999999999998    69999998799999999999


Q ss_pred             cEEEEe
Q 019991          262 DLTVME  267 (332)
Q Consensus       262 ~ti~~~  267 (332)
                      +++|+.
T Consensus       222 ~~~~v~  227 (264)
T 3epr_A          222 DTLLVT  227 (264)
T ss_dssp             EEEEET
T ss_pred             eEEEEC
Confidence            999995

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.96  E-value=5.2e-28  Score=221.38  Aligned_cols=220  Identities=19%  Similarity=0.303  Sum_probs=182.6

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~  107 (332)
                      ++++|+||+||||+++..++|++.++|++++++|++++++||++ ++...+.+.|+.+|+.... +.++++......++.
T Consensus         7 ~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~~~   85 (268)
T 3qgm_A            7 DKKGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGE-DEILVATYATARFIA   85 (268)
T ss_dssp             CCSEEEEECBTTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHHH
T ss_pred             cCCEEEEcCcCcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH-HHeeCHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999976 6777888999999999874 899999999999887


Q ss_pred             hcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCc
Q 019991          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP  187 (332)
Q Consensus       108 ~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~  187 (332)
                      +...      +.++++++.... ...+.+.|+.... ...++.++.          +.+..++|+++.++++.+ .++.+
T Consensus        86 ~~~~------~~~~~~~~~~~l-~~~~~~~g~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~l-~~~~~  146 (268)
T 3qgm_A           86 REKP------NAKVFTTGEEGL-IEELRLAGLEIVD-YDEAEYLVV----------GSNRKINFELMTKALRAC-LRGIR  146 (268)
T ss_dssp             HHST------TCEEEECCCHHH-HHHHHHTTCEECC-TTTCSEEEE----------CCCTTCBHHHHHHHHHHH-HHTCE
T ss_pred             hhCC------CCeEEEEcCHHH-HHHHHHcCCeecC-CCCCCEEEE----------ecCCCCCHHHHHHHHHHH-hCCCc
Confidence            6643      456666554211 2356777776633 246677777          455778899999998875 45788


Q ss_pred             EEEecCCccceeccceecCCChhHHHHHHh-cCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          188 MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       188 lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      ++++|++...+......+..+.+...++.. +.++ ...|||+|.+|+.+++++|+    ++||||++.+||++|+++|+
T Consensus       147 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~  226 (268)
T 3qgm_A          147 YIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGA  226 (268)
T ss_dssp             EEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             EEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCC
Confidence            999999998776554456777888888885 7888 89999999999999999998    69999997799999999999


Q ss_pred             cEEEEec
Q 019991          262 DLTVMEK  268 (332)
Q Consensus       262 ~ti~~~~  268 (332)
                      +++|+..
T Consensus       227 ~~~~v~~  233 (268)
T 3qgm_A          227 ETVLVLT  233 (268)
T ss_dssp             EEEEESS
T ss_pred             cEEEECC
Confidence            9999964

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.96  E-value=3.7e-28  Score=227.88  Aligned_cols=237  Identities=19%  Similarity=0.198  Sum_probs=187.7

Q ss_pred             ccccHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCC-cccccc
Q 019991           17 TLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFD-PSLFAG   94 (332)
Q Consensus        17 ~~~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~-~~~f~~   94 (332)
                      +.+++.++++  ++++|+||+||||+++..++|++.++++.|+++|++++++||++ ++...+.++|+.+|+. .. .+.
T Consensus        10 ~~~~~~~~~~--~~k~i~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~-~~~   86 (306)
T 2oyc_A           10 RGAALRDVLG--RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLR-AEQ   86 (306)
T ss_dssp             CHHHHHHHHH--HCSEEEECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCC-GGG
T ss_pred             CHHHHHHHHh--hCCEEEECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCC-hhh
Confidence            5567899999  89999999999999999999999999999999999999999986 5677888999999998 66 378


Q ss_pred             ccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCC-------CCCccEEEEecCCCCCCCCCCCc
Q 019991           95 AITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN-------VEEADFILAHGTEGMGLPSGDVR  167 (332)
Q Consensus        95 Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~-------~~~~~~vv~~~~~~~~~~~g~d~  167 (332)
                      +++++.++..++.+.... ...-|.++++++.... ...+.+.|+.....       ...++.++.          +++.
T Consensus        87 i~~~~~~~~~~l~~~~~~-~~~~~~~v~~~g~~~l-~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~----------~~~~  154 (306)
T 2oyc_A           87 LFSSALCAARLLRQRLPG-PPDAPGAVFVLGGEGL-RAELRAAGLRLAGDPSAGDGAAPRVRAVLV----------GYDE  154 (306)
T ss_dssp             EEEHHHHHHHHHHHHCCS-CSSSCCEEEEESCHHH-HHHHHHTTCEETTSCCCC---CCCEEEEEE----------CCCT
T ss_pred             EEcHHHHHHHHHHhhCCc-cccCCCeEEEECCHHH-HHHHHHCCCEeecccccccccCCCCCEEEE----------eCCC
Confidence            999999999998763210 0000356776664321 23566677654321       123455665          4567


Q ss_pred             ccCHHHHHHHHHHHHhCCCcEEEecCCccceecc-ceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----
Q 019991          168 PMSLQDLEKILEICASKKIPMVVANPDYVTVEAR-ALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~-~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      ...|+++.++++.+.++|..+++||++...+... ......|.+..+|+.+ +.+....|||+|.+|+.+++++|+    
T Consensus       155 ~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e  234 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR  234 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGG
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHH
Confidence            7889999999998877788779999998876222 2233445588899885 788889999999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ++||||++.+||++|+++|++++|+..
T Consensus       235 ~l~vGD~~~~Di~~a~~aG~~~i~v~~  261 (306)
T 2oyc_A          235 TLMVGDRLETDILFGHRCGMTTVLTLT  261 (306)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred             EEEECCCchHHHHHHHHCCCeEEEECC
Confidence            699999987999999999999999965

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.96  E-value=1.4e-27  Score=218.09  Aligned_cols=219  Identities=16%  Similarity=0.223  Sum_probs=179.8

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHh-CCCCccccccccccHHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKS-LGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~-lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      ++++|+||+||||+++...++++.++++.+++.|+++.++||++. ....+.+.|++ +|++... ++++++......|+
T Consensus         4 ~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~   82 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPA-SLVYTATLATIDYM   82 (264)
T ss_dssp             SCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCG-GGEEEHHHHHHHHH
T ss_pred             cCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCCh-hhEEcHHHHHHHHH
Confidence            589999999999999999999999999999999999999999874 55677788887 9999874 78999988888888


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      .+...      +..++..+.... ...+++.|+....  +.++.++.          +++....|+++.++++.|. +|.
T Consensus        83 ~~~~~------~~~~~~~g~~~l-~~~l~~~g~~~~~--~~~~~v~~----------~~~~~~~~~~~~~~l~~l~-~g~  142 (264)
T 1yv9_A           83 KEANR------GKKVFVIGEAGL-IDLILEAGFEWDE--TNPDYVVV----------GLDTELSYEKVVLATLAIQ-KGA  142 (264)
T ss_dssp             HHHCC------CSEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHHHH-TTC
T ss_pred             HhhCC------CCEEEEEeCHHH-HHHHHHcCCcccC--CCCCEEEE----------ECCCCcCHHHHHHHHHHHh-CCC
Confidence            76643      345555554221 2367888887654  46677776          3456778999999999885 899


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      ++|+||++..++......+..+++..+|+.+ ++++...+||+|.+|+.+++++|+    ++||||++.+||++|+++|+
T Consensus       143 ~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~  222 (264)
T 1yv9_A          143 LFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGI  222 (264)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             EEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCC
Confidence            9999999987665443345666788999885 778888999999999999999998    69999998799999999999


Q ss_pred             cEEEEec
Q 019991          262 DLTVMEK  268 (332)
Q Consensus       262 ~ti~~~~  268 (332)
                      +++|+..
T Consensus       223 ~~i~v~~  229 (264)
T 1yv9_A          223 DSLLVTS  229 (264)
T ss_dssp             EEEEETT
T ss_pred             cEEEECC
Confidence            9999964

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.95  E-value=3.7e-27  Score=215.66  Aligned_cols=218  Identities=19%  Similarity=0.253  Sum_probs=180.2

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~  107 (332)
                      ++++|+||+||||+++..++|++.++|++++++|++++++||++ |+...+.+.++.+|+.... +.++++......++.
T Consensus         5 ~~kli~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~-~~ii~~~~~~~~~~~   83 (266)
T 3pdw_A            5 TYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATE-EQVFTTSMATAQHIA   83 (266)
T ss_dssp             CCSEEEEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHHH
T ss_pred             cCCEEEEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH-HHccCHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999966 6777888999999998874 889999999888887


Q ss_pred             hcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCc
Q 019991          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP  187 (332)
Q Consensus       108 ~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~  187 (332)
                      +...      +.+++..+.... ...+++.|+.+..  ..++.++.          +.+....|+++.++++.+ ..+.+
T Consensus        84 ~~~~------~~~~~~~~~~~~-~~~~~~~g~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~l-~~~~~  143 (266)
T 3pdw_A           84 QQKK------DASVYVIGEEGI-RQAIEENGLTFGG--ENADFVVV----------GIDRSITYEKFAVGCLAI-RNGAR  143 (266)
T ss_dssp             HHCT------TCEEEEESCHHH-HHHHHHTTCEECC--TTCSEEEE----------CCCTTCCHHHHHHHHHHH-HTTCE
T ss_pred             hhCC------CCEEEEEeChhH-HHHHHHcCCccCC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCe
Confidence            6543      456665554211 2356777776543  46677777          445778899999998865 56788


Q ss_pred             EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCc
Q 019991          188 MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLD  262 (332)
Q Consensus       188 lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~  262 (332)
                      ++++|++...+......+..+.+...|+.. +.+....|||+|.+|+.+++++|+    ++||||++.+||++|+++|+.
T Consensus       144 ~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~  223 (266)
T 3pdw_A          144 FISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMD  223 (266)
T ss_dssp             EEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCE
T ss_pred             EEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCe
Confidence            999999988776544445566788899885 888899999999999999999998    699999977999999999999


Q ss_pred             EEEEe
Q 019991          263 LTVME  267 (332)
Q Consensus       263 ti~~~  267 (332)
                      +++++
T Consensus       224 ~~~v~  228 (266)
T 3pdw_A          224 TLLVH  228 (266)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99997

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.95  E-value=3.3e-26  Score=209.41  Aligned_cols=223  Identities=20%  Similarity=0.285  Sum_probs=177.9

Q ss_pred             HHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHH
Q 019991           23 HIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        23 ~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .+++  ++++|+||+||||+++..++|++.+++++|+++|++++++||++ ++...+.+.++.+|+.... +.++++...
T Consensus        12 ~~~~--~~~~v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~-~~ii~~~~~   88 (271)
T 1vjr_A           12 HVLD--KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD-DAVVTSGEI   88 (271)
T ss_dssp             CGGG--GCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG-GGEEEHHHH
T ss_pred             cccc--CCCEEEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCCh-hhEEcHHHH
Confidence            3456  79999999999999999999999999999999999999999985 6777888999999998764 788898888


Q ss_pred             HHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHH
Q 019991          102 THQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEIC  181 (332)
Q Consensus       102 ~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l  181 (332)
                      ...++.+...      +..++..+.... ...+++.|+....  ..++.++.          +.+....|+++.++++.+
T Consensus        89 ~~~~~~~~~~------~~~~~~~~~~~~-~~~l~~~g~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~l~~l  149 (271)
T 1vjr_A           89 TAEHMLKRFG------RCRIFLLGTPQL-KKVFEAYGHVIDE--ENPDFVVL----------GFDKTLTYERLKKACILL  149 (271)
T ss_dssp             HHHHHHHHHC------SCEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCC------CCeEEEEcCHHH-HHHHHHcCCccCC--CCCCEEEE----------eCCCCcCHHHHHHHHHHH
Confidence            8888765422      345554443211 2356667765543  34566666          334567899999999987


Q ss_pred             HhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHH
Q 019991          182 ASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEG  255 (332)
Q Consensus       182 ~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~g  255 (332)
                       .++.++++||++...+......+..+++..+|+.. +.+. ...|||+|.+|+.+++++|+    ++||||++.+||++
T Consensus       150 -~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~  228 (271)
T 1vjr_A          150 -RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKL  228 (271)
T ss_dssp             -TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             -HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHH
Confidence             78889999999887665433345556688888885 7787 88999999999999999998    69999997789999


Q ss_pred             HHHcCCcEEEEec
Q 019991          256 SMQLNLDLTVMEK  268 (332)
Q Consensus       256 A~~aG~~ti~~~~  268 (332)
                      |+++|+.++++..
T Consensus       229 a~~aG~~~i~v~~  241 (271)
T 1vjr_A          229 GKNAGIVSILVLT  241 (271)
T ss_dssp             HHHHTCEEEEESS
T ss_pred             HHHcCCeEEEECC
Confidence            9999999999965

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.93  E-value=1.2e-24  Score=196.73  Aligned_cols=214  Identities=16%  Similarity=0.207  Sum_probs=162.0

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL  107 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L~  107 (332)
                      .+++|+||+||||+++...++++.++++.+++.|+++.++||++ ++...+.+.|+.+|++... +.++++......++.
T Consensus         6 ~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~   84 (259)
T 2ho4_A            6 ALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISE-DEIFTSLTAARNLIE   84 (259)
T ss_dssp             CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHHH
T ss_pred             hCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccH-HHeecHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999987 5667788899999998874 788888888777776


Q ss_pred             hcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCc
Q 019991          108 RRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP  187 (332)
Q Consensus       108 ~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~  187 (332)
                      +..        ..++.++.... ...+...+.      ..++.++...         .+....|+++.++++.+. +|.+
T Consensus        85 ~~~--------~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~l~~l~-~~~~  139 (259)
T 2ho4_A           85 QKQ--------VRPMLLLDDRA-LPEFTGVQT------QDPNAVVIGL---------APEHFHYQLLNQAFRLLL-DGAP  139 (259)
T ss_dssp             HHT--------CCEEEESCGGG-GGGGTTCCC------SSCCEEEECC---------CGGGCBHHHHHHHHHHHH-TTCC
T ss_pred             HcC--------CeEEEEeCHHH-HHHHHHcCC------CCCCEEEEec---------CCCCCCHHHHHHHHHHHH-CCCE
Confidence            652        23444443221 123443322      2456666632         234568999999999877 8999


Q ss_pred             EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCc
Q 019991          188 MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLD  262 (332)
Q Consensus       188 lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~  262 (332)
                      +++||++...+......++.+.+...++.+ +.+....+||+|.+|+.+++++|+    ++||||++.+||++|+++|++
T Consensus       140 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~  219 (259)
T 2ho4_A          140 LIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGML  219 (259)
T ss_dssp             EEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred             EEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCc
Confidence            999999887665443233333333333353 778888999999999999999998    699999976899999999999


Q ss_pred             EEEEec
Q 019991          263 LTVMEK  268 (332)
Q Consensus       263 ti~~~~  268 (332)
                      ++++..
T Consensus       220 ~i~v~~  225 (259)
T 2ho4_A          220 GILVKT  225 (259)
T ss_dssp             EEEESS
T ss_pred             EEEECC
Confidence            999964

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.88  E-value=8.7e-21  Score=168.48  Aligned_cols=216  Identities=19%  Similarity=0.275  Sum_probs=158.3

Q ss_pred             cCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      |.+++|+||+||||+++...++.+.++++.+++.|+++.++||.+ ++...+.+.+..+|+.... +.+++.......++
T Consensus         1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~   79 (250)
T 2c4n_A            1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFL   79 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCH-HHeEcHHHHHHHHH
Confidence            458999999999999999999999999999999999999999875 5667778888888987653 56777666555665


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      ....       ......-+.. +-...+++.|+.+..  ...+.++.          +.+..+.|..+..+... ...++
T Consensus        80 ~~~~-------~~~~~~~~~~-~~l~~l~~~g~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~  138 (250)
T 2c4n_A           80 RRQE-------GKKAYVVGEG-ALIHELYKAGFTITD--VNPDFVIV----------GETRSYNWDMMHKAAYF-VANGA  138 (250)
T ss_dssp             HTSS-------CCEEEEECCT-HHHHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHH-HHTTC
T ss_pred             HhcC-------CCEEEEEcCH-HHHHHHHHcCCcccC--CCCCEEEE----------eCCCCCCHHHHHHHHHH-HHCCC
Confidence            4432       1222221211 112356667776653  35566666          33466788888877664 46788


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      ++++||++ ...  .......|.+...++.. +.+....|||+|.+|+.+++++|+    +++|||++.+||++|+++|+
T Consensus       139 ~~i~t~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~  215 (250)
T 2c4n_A          139 RFIATNPD-THG--RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL  215 (250)
T ss_dssp             EEEESCCC-SBS--STTCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred             EEEEECCC-CCC--CCeeecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCC
Confidence            88999987 211  11112223366777775 777788999999999999999998    69999996689999999999


Q ss_pred             cEEEEec
Q 019991          262 DLTVMEK  268 (332)
Q Consensus       262 ~ti~~~~  268 (332)
                      .++++..
T Consensus       216 ~~~~v~~  222 (250)
T 2c4n_A          216 ETILVLS  222 (250)
T ss_dssp             EEEEESS
T ss_pred             eEEEECC
Confidence            9999854

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.87  E-value=4.8e-20  Score=166.42  Aligned_cols=215  Identities=16%  Similarity=0.200  Sum_probs=155.0

Q ss_pred             CccEEEEeccceeec----CCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHH
Q 019991           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTH  103 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~----g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~  103 (332)
                      .+++|+||+||||++    +..+.++..++++.+++.|+++.++||++ ++...+...++.+|+.... +.+++......
T Consensus        11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~   89 (271)
T 2x4d_A           11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISE-QEVTAPAPAAC   89 (271)
T ss_dssp             TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCG-GGEECHHHHHH
T ss_pred             cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCH-HHeecHHHHHH
Confidence            689999999999999    55688999999999999999999999976 5667788888999998764 67777776666


Q ss_pred             HHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHh
Q 019991          104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICAS  183 (332)
Q Consensus       104 ~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~  183 (332)
                      .++....        ...+....... ...++....      .+...+++++         .+....|+++.+.++.+.+
T Consensus        90 ~~~~~~~--------~~~~~~~~~~~-~~~l~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~l~~l~~  145 (271)
T 2x4d_A           90 QILKERG--------LRPYLLIHDGV-RSEFDQIDT------SNPNCVVIAD---------AGESFSYQNMNNAFQVLME  145 (271)
T ss_dssp             HHHHHHT--------CCEEEECCGGG-GGGGTTSCC------SSCSEEEECC---------CGGGCCHHHHHHHHHHHHH
T ss_pred             HHHHHcC--------CEEEEEeCHHH-HHHHHHcCC------CCCCEEEEec---------CCCCcCHHHHHHHHHHHHh
Confidence            6655442        12222221111 112333221      2345555532         2355678999999988877


Q ss_pred             C-CCcEEEecCCccceeccceecCCChhHHHHHH-hcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHH
Q 019991          184 K-KIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSM  257 (332)
Q Consensus       184 ~-g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~-~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~  257 (332)
                      + +.+++++|.+.............+.+...+.. .+.+....|||+|.+|+.+++++|+    +++|||+..+||.+|+
T Consensus       146 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~  225 (271)
T 2x4d_A          146 LEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQ  225 (271)
T ss_dssp             CSSCCEEEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHH
T ss_pred             cCCCeEEEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHH
Confidence            6 88888888877655433222222233333333 3667788999999999999999998    6999999658999999


Q ss_pred             HcCCcEEEEec
Q 019991          258 QLNLDLTVMEK  268 (332)
Q Consensus       258 ~aG~~ti~~~~  268 (332)
                      ++|+.++++..
T Consensus       226 ~aG~~~~~v~~  236 (271)
T 2x4d_A          226 RCGMRALQVRT  236 (271)
T ss_dssp             HTTCEEEEESS
T ss_pred             HCCCcEEEEcC
Confidence            99999999965

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.68  E-value=2.2e-16  Score=137.62  Aligned_cols=125  Identities=18%  Similarity=0.150  Sum_probs=93.9

Q ss_pred             cCccEEEEeccceeec---------------CCccCcCHHHHHHHHHHCCCeEEEEeCCCCC-hhHHHHHHHhCCCCccc
Q 019991           28 RRFKAWLLDQFGVLHD---------------GKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGFDPSL   91 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~---------------g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~~~~~~L~~lGl~~~~   91 (332)
                      |++++++||+||||++               ...++||+.++|+.|+++|++++++||++.. .+.+...|+++|+... 
T Consensus         1 m~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~-   79 (189)
T 3ib6_A            1 MSLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY-   79 (189)
T ss_dssp             --CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG-
T ss_pred             CCceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh-
Confidence            4689999999999943               4689999999999999999999999998753 3444555666665433 


Q ss_pred             cccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCH
Q 019991           92 FAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSL  171 (332)
Q Consensus        92 f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y  171 (332)
                      |+.                                                        ++...           ..   
T Consensus        80 fd~--------------------------------------------------------i~~~~-----------~~---   89 (189)
T 3ib6_A           80 FDF--------------------------------------------------------IYASN-----------SE---   89 (189)
T ss_dssp             EEE--------------------------------------------------------EEECC-----------TT---
T ss_pred             eEE--------------------------------------------------------EEEcc-----------cc---
Confidence            211                                                        11100           00   


Q ss_pred             HHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeC
Q 019991          172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLES  247 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGD  247 (332)
                                .                                     +....+||+|.+|+.+++++|+    .+||||
T Consensus        90 ----------~-------------------------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD  122 (189)
T 3ib6_A           90 ----------L-------------------------------------QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGN  122 (189)
T ss_dssp             ----------S-------------------------------------STTCCCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             ----------c-------------------------------------cccCCCCcCHHHHHHHHHHcCCCcccEEEECC
Confidence                      0                                     0113569999999999999998    699999


Q ss_pred             ChhhHHHHHHHcCCcEEEEecch
Q 019991          248 SPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       248 s~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ++.+||++|+++||+++++....
T Consensus       123 ~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A          123 TFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             BTTTTHHHHHHTTCEEEEECCTT
T ss_pred             CcHHHHHHHHHCCCeEEEECCcc
Confidence            97789999999999999997643

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.67  E-value=2.5e-17  Score=148.87  Aligned_cols=92  Identities=12%  Similarity=0.035  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.|.++|+++ ++||+.....     .+...++..+|+.+ +++....+||+|++|..|++++|+    ++|
T Consensus        97 ~pg~~~ll~~L~~~g~~i~i~t~~~~~~~-----~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           97 LPGIRSLLADLRAQQISVGLASVSLNAPT-----ILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTTHHH-----HHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccHHHHHHhhhcccccceecccccchhh-----hhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            477889999998999986 6676543211     23344567777775 677788899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||++ .||++|+++||++|++..
T Consensus       172 VgDs~-~di~aA~~aG~~~I~V~~  194 (243)
T 4g9b_A          172 IEDAQ-AGIDAINASGMRSVGIGA  194 (243)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEEST
T ss_pred             EcCCH-HHHHHHHHcCCEEEEECC
Confidence            99995 899999999999999963

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.66  E-value=3.4e-17  Score=150.35  Aligned_cols=98  Identities=5%  Similarity=-0.045  Sum_probs=78.3

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      ...|+++.++++.|+++|+++ |+||.+.......-..+..+++..+|+.+ +. ... +||+|.+|+.+++++|+    
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~~  206 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTNN  206 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCccc
Confidence            345788999999998899986 79998875332210012245688888875 55 566 99999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+||||+ .+||++|+++||+++++++
T Consensus       207 ~l~VgDs-~~di~aA~~aG~~~i~v~~  232 (261)
T 1yns_A          207 ILFLTDV-TREASAAEEADVHVAVVVR  232 (261)
T ss_dssp             EEEEESC-HHHHHHHHHTTCEEEEECC
T ss_pred             EEEEcCC-HHHHHHHHHCCCEEEEEeC
Confidence            6999999 7899999999999999975

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.62  E-value=1.2e-16  Score=140.38  Aligned_cols=92  Identities=22%  Similarity=0.191  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.|.++|.++ ++||........   .+...++..+|+.+ +++....+||+|.+|+.|++++|+    ++|
T Consensus        86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~---~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  162 (216)
T 3kbb_A           86 NPGVREALEFVKSKRIKLALATSTPQREALE---RLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVV  162 (216)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHHcCCCcccccCCcHHHHHH---HHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceEE
Confidence            467889999988999986 889976654332   13334567778774 677788899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEE
Q 019991          245 LESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      |||++ +||++|+++||++||.
T Consensus       163 VgDs~-~Di~aA~~aG~~~i~~  183 (216)
T 3kbb_A          163 FEDSK-SGVEAAKSAGIERIYG  183 (216)
T ss_dssp             EECSH-HHHHHHHHTTCCCEEE
T ss_pred             EecCH-HHHHHHHHcCCcEEEE
Confidence            99996 7999999999999984

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.59  E-value=1e-14  Score=129.42  Aligned_cols=49  Identities=10%  Similarity=0.020  Sum_probs=43.6

Q ss_pred             cccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE-EEEecc
Q 019991          220 EVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL-TVMEKL  269 (332)
Q Consensus       220 e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t-i~~~~~  269 (332)
                      +....+||+|.+|+.+++++|+    .+||||++ +||++|+++|+++ +++..-
T Consensus       125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g  178 (211)
T 2gmw_A          125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTG  178 (211)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSS
T ss_pred             ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCceEEEEecC
Confidence            3456799999999999999998    69999997 9999999999999 999643

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.58  E-value=5.6e-16  Score=140.44  Aligned_cols=94  Identities=14%  Similarity=0.086  Sum_probs=72.9

Q ss_pred             CHHHHHHHHHHHHhCCCcEEE-ecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPMVV-ANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~lIa-TN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.|+++|.++.. +|+....   .  .+...++..+|+.+ +++....+||+|++|..|++++|+    ++
T Consensus       117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~~~~---~--~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  191 (250)
T 4gib_A          117 ILPGIESLLIDVKSNNIKIGLSSASKNAI---N--VLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI  191 (250)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTTHH---H--HHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             cchhHHHHHHHHHhcccccccccccchhh---h--HhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence            357789999999899998644 3332211   1  23333466777774 677788899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||||++ .||++|+++||++|++...
T Consensus       192 ~VGDs~-~Di~aA~~aG~~~i~v~~~  216 (250)
T 4gib_A          192 GIEDAS-AGIDAINSANMFSVGVGNY  216 (250)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEEESCT
T ss_pred             EECCCH-HHHHHHHHcCCEEEEECCh
Confidence            999996 7999999999999999643

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.56  E-value=3.8e-15  Score=133.03  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH--HHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~--e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+.......   +.. ++..+|  +.+ +++....+||+|.+|+.+++++|+    +
T Consensus       111 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  186 (243)
T 3qxg_A          111 MPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEA  186 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECCCCCHHHHTT---HHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHH---HHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence            467888898888899985 7898775433321   333 566777  664 667788999999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|||++ +||++|+++|+.+++++.-
T Consensus       187 i~vGD~~-~Di~~a~~aG~~~i~v~~~  212 (243)
T 3qxg_A          187 VVIENAP-LGVEAGHKAGIFTIAVNTG  212 (243)
T ss_dssp             EEEECSH-HHHHHHHHTTCEEEEECCS
T ss_pred             EEEeCCH-HHHHHHHHCCCEEEEEeCC
Confidence            9999996 8999999999999999653

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.56  E-value=4.2e-15  Score=120.89  Aligned_cols=44  Identities=20%  Similarity=0.277  Sum_probs=41.4

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      +++++||+||||++...++||+.++|++|+++|++++++||++.
T Consensus         2 ~k~i~~D~DgtL~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~   45 (137)
T 2pr7_A            2 MRGLIVDYAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPG   45 (137)
T ss_dssp             CCEEEECSTTTTSSCHHHHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred             CcEEEEeccceecCCCccCccHHHHHHHHHHCCCEEEEEeCCCH
Confidence            57999999999998889999999999999999999999999764

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.55  E-value=1.8e-14  Score=123.48  Aligned_cols=47  Identities=13%  Similarity=-0.124  Sum_probs=42.8

Q ss_pred             cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          222 RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       222 ~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ...+||+|.+|+.+++++|+    .+||||+. +||++|+++|++++++..-
T Consensus        97 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g  147 (179)
T 3l8h_A           97 CACRKPLPGMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTG  147 (179)
T ss_dssp             CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH-HHHHHHHHHTCEEEEESTT
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCcEEEECCC
Confidence            35689999999999999998    69999996 8999999999999999754

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.54  E-value=5e-15  Score=131.51  Aligned_cols=94  Identities=12%  Similarity=0.077  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH--HHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~--e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+.. ++..+|  +.+ +++....|||+|.+|+.+++++|+    +
T Consensus       110 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  185 (247)
T 3dv9_A          110 MPGALEVLTKIKSEGLTPMVVTGSGQTSLLD---RLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEA  185 (247)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSCC---CHH---HHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             CCCHHHHHHHHHHcCCcEEEEcCCchHHHHH---HHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhhe
Confidence            467888999888899986 788876543322   1333 566677  664 666778899999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|||+. +||++|+++|+.+++++.-
T Consensus       186 i~vGD~~-~Di~~a~~aG~~~i~v~~~  211 (247)
T 3dv9_A          186 LVIENAP-LGVQAGVAAGIFTIAVNTG  211 (247)
T ss_dssp             EEEECSH-HHHHHHHHTTSEEEEECCS
T ss_pred             EEEeCCH-HHHHHHHHCCCeEEEEcCC
Confidence            9999996 8999999999999999753

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.54  E-value=2.7e-14  Score=126.93  Aligned_cols=48  Identities=10%  Similarity=0.018  Sum_probs=43.2

Q ss_pred             cccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcE-EEEec
Q 019991          220 EVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDL-TVMEK  268 (332)
Q Consensus       220 e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~t-i~~~~  268 (332)
                      +....+||+|.+|+.+++++|+    .+||||++ +||++|+++|+++ +++..
T Consensus       131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~  183 (218)
T 2o2x_A          131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDG  183 (218)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETC
T ss_pred             cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH-HHHHHHHHCCCCEeEEEec
Confidence            3456799999999999999998    69999997 9999999999999 99853

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.52  E-value=1.3e-14  Score=128.79  Aligned_cols=98  Identities=12%  Similarity=-0.013  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceec---CCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV---MPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l---~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      ++++.++++.|+++ .++ |+||.+......-...+   ...++..+|+.+ +++....+||+|.+|+.+++++|+    
T Consensus       114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~  192 (229)
T 4dcc_A          114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKE  192 (229)
T ss_dssp             CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            47889999988777 775 88998776543110012   455678888874 667788999999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      +++|||++ +||++|+++|+.+++++.-.
T Consensus       193 ~~~vGD~~-~Di~~a~~aG~~~i~v~~~~  220 (229)
T 4dcc_A          193 TFFIDDSE-INCKVAQELGISTYTPKAGE  220 (229)
T ss_dssp             EEEECSCH-HHHHHHHHTTCEEECCCTTC
T ss_pred             eEEECCCH-HHHHHHHHcCCEEEEECCHH
Confidence            69999997 89999999999999997543

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.51  E-value=1.5e-15  Score=133.59  Aligned_cols=92  Identities=10%  Similarity=0.068  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|++ |.++ ++||.+......   .+...++..+|+.+ +++  ..+||+|++|..+++++|+    ++|
T Consensus        86 ~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~---~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~  159 (210)
T 2ah5_A           86 FPQIIDLLEELSS-SYPLYITTTKDTSTAQD---MAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAII  159 (210)
T ss_dssp             CTTHHHHHHHHHT-TSCEEEEEEEEHHHHHH---HHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHc-CCeEEEEeCCCHHHHHH---HHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEE
Confidence            4678889988877 9886 889976643321   13333466677764 445  6789999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+. +||++|+++|++++++..-
T Consensus       160 vgDs~-~Di~~a~~aG~~~i~v~~~  183 (210)
T 2ah5_A          160 IGDTK-FDMLGARETGIQKLAITWG  183 (210)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESSS
T ss_pred             ECCCH-HHHHHHHHCCCcEEEEcCC
Confidence            99995 8999999999999999643

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.51  E-value=4.2e-14  Score=124.58  Aligned_cols=45  Identities=20%  Similarity=0.203  Sum_probs=41.0

Q ss_pred             cCCCCHHHHHHHHHHhCC-----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          224 MGKPDKLWATLFTMILRV-----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       224 ~GKP~p~if~~Al~~lg~-----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      .+||+|.+|..+++++|+     .+||||++ +||++|+++||++|++..-
T Consensus        85 ~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~-~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A           85 AGWPQPDACWMALMALNVSQLEGCVLISGDP-RLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             SCTTSTHHHHHHHHHTTCSCSTTCEEEESCH-HHHHHHHHHTCEEEEESSS
T ss_pred             CCCCChHHHHHHHHHcCCCCCccEEEEeCCH-HHHHHHHHCCCEEEEEccC
Confidence            579999999999999987     48999996 8999999999999999653

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.50  E-value=1.2e-14  Score=128.35  Aligned_cols=97  Identities=13%  Similarity=0.110  Sum_probs=73.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC-----eE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV-----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~-----~l  243 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+     .+
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~---~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v  181 (231)
T 3kzx_A          105 NDGAIELLDTLKENNITMAIVSNKNGERLRS---EIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF  181 (231)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHH---HHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCHHHHHH---HHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE
Confidence            467888999988899985 778875543221   12223355556653 556677899999999999999997     48


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||++ +|+++|+++|+.++++.....
T Consensus       182 ~vGD~~-~Di~~a~~aG~~~v~~~~~~~  208 (231)
T 3kzx_A          182 FIGDSI-SDIQSAIEAGCLPIKYGSTNI  208 (231)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEEECC---
T ss_pred             EEcCCH-HHHHHHHHCCCeEEEECCCCC
Confidence            999997 899999999999999965543

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.50  E-value=1e-14  Score=132.73  Aligned_cols=96  Identities=17%  Similarity=0.152  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|.++|.++ |+||.+... . .  .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++|
T Consensus       108 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~-~-~--~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~  183 (263)
T 3k1z_A          108 LDGAEDTLRECRTRGLRLAVISNFDRRL-E-G--ILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAH  183 (263)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESCCTTH-H-H--HHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhCCCcEEEEeCCcHHH-H-H--HHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            477899999998899986 889976532 1 1  12333355566663 556677899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecch
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      |||++.+||++|+++|+.+++++...
T Consensus       184 vGD~~~~Di~~a~~aG~~~i~~~~~~  209 (263)
T 3k1z_A          184 VGDNYLCDYQGPRAVGMHSFLVVGPQ  209 (263)
T ss_dssp             EESCHHHHTHHHHTTTCEEEEECCSS
T ss_pred             ECCCcHHHHHHHHHCCCEEEEEcCCC
Confidence            99997689999999999999998653

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.47  E-value=1.6e-14  Score=127.36  Aligned_cols=96  Identities=16%  Similarity=0.101  Sum_probs=74.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhC-C----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILR-V----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg-~----~  242 (332)
                      .|+++.++++.+.++ .++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++| +    .
T Consensus       104 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  179 (238)
T 3ed5_A          104 LIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYK---RLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT  179 (238)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEECSCHHHHHH---HHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGE
T ss_pred             CCccHHHHHHHHHhc-CeEEEEeCCCHHHHHH---HHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHe
Confidence            357788999888777 775 789876643321   12223455566663 56667889999999999999999 7    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|||++.+||++|+++|+.+++++..
T Consensus       180 i~vGD~~~~Di~~a~~aG~~~i~~~~~  206 (238)
T 3ed5_A          180 LIIGDSLTADIKGGQLAGLDTCWMNPD  206 (238)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             EEECCCcHHHHHHHHHCCCEEEEECCC
Confidence            999999768999999999999999764

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.47  E-value=1.1e-14  Score=128.24  Aligned_cols=98  Identities=11%  Similarity=0.068  Sum_probs=75.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+. +|.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    ++
T Consensus       108 ~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  183 (240)
T 3qnm_A          108 LMPHAKEVLEYLA-PQYNLYILSNGFRELQSR---KMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL  183 (240)
T ss_dssp             BSTTHHHHHHHHT-TTSEEEEEECSCHHHHHH---HHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred             cCccHHHHHHHHH-cCCeEEEEeCCchHHHHH---HHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            3577888998887 88885 788875543321   12222344555553 566778899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||++.+||++|+++|+.+++++....
T Consensus       184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~  211 (240)
T 3qnm_A          184 MIGDSWEADITGAHGVGMHQAFYNVTER  211 (240)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred             EECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence            9999977899999999999999988764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.46  E-value=4.3e-16  Score=137.16  Aligned_cols=94  Identities=13%  Similarity=0.066  Sum_probs=71.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHH---HHHhCC---
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLF---TMILRV---  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~A---l~~lg~---  241 (332)
                      .++++.++++.+.+ |.++ ++||.+.......   +..  +..+|+.+ +++....+||+|.+|+.+   ++++|+   
T Consensus       100 ~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~---l~~--l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~  173 (240)
T 3smv_A          100 AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLS---NAK--LGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK  173 (240)
T ss_dssp             BCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHH---HTT--TCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred             CCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHH---HHh--cCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence            45788899988877 7774 8899876533221   111  33345553 556677899999999999   888998   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                       +++|||++.+||++|+++|+.+++++..
T Consensus       174 ~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          174 DILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             GEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             hEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence             6999999768999999999999999865

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.45  E-value=4e-14  Score=126.88  Aligned_cols=97  Identities=14%  Similarity=0.211  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCc--ccccCCCCHHHHHHHHHHhCC-----
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGE--VRWMGKPDKLWATLFTMILRV-----  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e--~~~~GKP~p~if~~Al~~lg~-----  241 (332)
                      ++++.++++.|.++|.++ ++||.+.......  .....++..+|+.+ +++  ....+||+|.+|+.+++++|+     
T Consensus       114 ~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~--l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  191 (250)
T 3l5k_A          114 MPGAEKLIIHLRKHGIPFALATSSRSASFDMK--TSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME  191 (250)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEECSCCHHHHHHH--TTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGG
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHH--HHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcc
Confidence            467889999988899986 7898765432211  11223566777764 666  778999999999999999997     


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                       +++|||+. +||++|+++|+.+++++.-+
T Consensus       192 ~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~  220 (250)
T 3l5k_A          192 KCLVFEDAP-NGVEAALAAGMQVVMVPDGN  220 (250)
T ss_dssp             GEEEEESSH-HHHHHHHHTTCEEEECCCTT
T ss_pred             eEEEEeCCH-HHHHHHHHcCCEEEEEcCCC
Confidence             38999996 89999999999999997654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.45  E-value=3.2e-15  Score=132.26  Aligned_cols=95  Identities=15%  Similarity=0.047  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCCe-EEEeC
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQ-MQLES  247 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~-lmIGD  247 (332)
                      ++++.++++.|+++|.++ ++||.+.. .. .  .+...++..+|+.+ +++....+||+|.+|+.+++++|+. +||||
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~-~--~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~vgD  172 (220)
T 2zg6_A           97 YDDTLEFLEGLKSNGYKLALVSNASPR-VK-T--LLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPAVHVGD  172 (220)
T ss_dssp             CTTHHHHHHHHHTTTCEEEECCSCHHH-HH-H--HHHHHTCGGGCSEEC-----------CCHHHHHHHHHCSSEEEEES
T ss_pred             CcCHHHHHHHHHHCCCEEEEEeCCcHH-HH-H--HHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCCeEEEcC
Confidence            478899999988889986 77987542 11 1  23333455566664 6666778999999999999999985 99999


Q ss_pred             ChhhHHHHHHHcCCcEEEEecc
Q 019991          248 SPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       248 s~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++.+||++|+++|+++++++..
T Consensus       173 ~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          173 IYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             SCCCCCCCSSSCSEEEEEBCTT
T ss_pred             CchHhHHHHHHCCCeEEEECCC
Confidence            9766999999999999999754

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.45  E-value=7e-14  Score=123.06  Aligned_cols=94  Identities=4%  Similarity=-0.008  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHhC-CCcE-EEecCCccceeccceecCCChhHHHHHHh--cCcccccCCCCHHHHHHHHHHhC--C----
Q 019991          172 QDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKLWATLFTMILR--V----  241 (332)
Q Consensus       172 ~~l~~~l~~l~~~-g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g~e~~~~GKP~p~if~~Al~~lg--~----  241 (332)
                      +++.++++.+.++ |.++ |+||........   .+...++..+|+..  +.+....+||.|.+|+.+++++|  +    
T Consensus        96 ~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~  172 (234)
T 2hcf_A           96 EGVRELLDALSSRSDVLLGLLTGNFEASGRH---KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQ  172 (234)
T ss_dssp             TTHHHHHHHHHTCTTEEEEEECSSCHHHHHH---HHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGG
T ss_pred             CCHHHHHHHHHhCCCceEEEEcCCcHHHHHH---HHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCccc
Confidence            6678888888888 8885 788876543221   12222344445442  22323457899999999999999  6    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      .++|||++ +|+++|+++|+.++++..-
T Consensus       173 ~i~iGD~~-~Di~~a~~aG~~~i~v~~~  199 (234)
T 2hcf_A          173 IVIIGDTE-HDIRCARELDARSIAVATG  199 (234)
T ss_dssp             EEEEESSH-HHHHHHHTTTCEEEEECCS
T ss_pred             EEEECCCH-HHHHHHHHCCCcEEEEcCC
Confidence            59999996 8999999999999999654

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.45  E-value=1.7e-14  Score=129.17  Aligned_cols=93  Identities=15%  Similarity=0.123  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|+++ |+||.+......   .+...++. +|+.+ +++....+||+|.+|..+++++|+    ++|
T Consensus       112 ~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~  187 (240)
T 2hi0_A          112 FPGILDLMKNLRQKGVKLAVVSNKPNEAVQV---LVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY  187 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHH---HHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEeCCCHHHHHH---HHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            477889999888899996 889875532221   12211233 55553 556677899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. +||++|+++|+.++++..
T Consensus       188 vGDs~-~Di~~a~~aG~~~v~v~~  210 (240)
T 2hi0_A          188 IGDSE-IDIQTARNSEMDEIAVNW  210 (240)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEESS
T ss_pred             EcCCH-HHHHHHHHCCCeEEEECC
Confidence            99995 899999999999999964

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.45  E-value=1.4e-14  Score=127.85  Aligned_cols=94  Identities=13%  Similarity=0.103  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++|.++ |+||.+....     .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++|
T Consensus        94 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-----~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  168 (233)
T 3nas_A           94 LPGIGRLLCQLKNENIKIGLASSSRNAPK-----ILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA  168 (233)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCSCTTHHH-----HHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred             CcCHHHHHHHHHHCCCcEEEEcCchhHHH-----HHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence            467888999988899986 7788754211     12223355566664 667778899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecch
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      |||+. +||++|+++|+.+++++..+
T Consensus       169 vGDs~-~Di~~a~~aG~~~~~~~~~~  193 (233)
T 3nas_A          169 IEDAE-AGISAIKSAGMFAVGVGQGQ  193 (233)
T ss_dssp             EECSH-HHHHHHHHTTCEEEECC---
T ss_pred             EeCCH-HHHHHHHHcCCEEEEECCcc
Confidence            99995 89999999999999997653

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.45  E-value=7.8e-14  Score=125.61  Aligned_cols=95  Identities=13%  Similarity=0.080  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-h-cCcccc-cCCCCHHHHHHHHHHhCC----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-GGEVRW-MGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~-g~e~~~-~GKP~p~if~~Al~~lg~----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|+. + +.+... .+||+|.+|+.+++++|+    +
T Consensus       112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  188 (259)
T 4eek_A          112 IEGAAETLRALRAAGVPFAIGSNSERGRLHL---KLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERC  188 (259)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEECSSCHHHHHH---HHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence            467888898888889885 788876643322   1333356777877 5 566677 999999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|||++ +|+++|+++|+.+++++..
T Consensus       189 i~iGD~~-~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          189 VVIEDSV-TGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             EEEESSH-HHHHHHHHHTCEEEEECCT
T ss_pred             EEEcCCH-HHHHHHHHCCCEEEEEccC
Confidence            9999997 8999999999999999754

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.44  E-value=1.2e-14  Score=127.63  Aligned_cols=95  Identities=13%  Similarity=0.061  Sum_probs=73.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    ++
T Consensus        87 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           87 VYDGIEALLSSLKDYGFHLVVATSKPTVFSKQ---ILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHH---HHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHH---HHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            3577888999888889885 778865432221   12222355556654 566678899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +|||+. +||++|+++|+.+++++.
T Consensus       164 ~iGD~~-~Di~~a~~aG~~~i~v~~  187 (226)
T 3mc1_A          164 MIGDRE-YDVIGALKNNLPSIGVTY  187 (226)
T ss_dssp             EEESSH-HHHHHHHTTTCCEEEESS
T ss_pred             EECCCH-HHHHHHHHCCCCEEEEcc
Confidence            999996 899999999999999973

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.44  E-value=1.2e-13  Score=119.36  Aligned_cols=49  Identities=4%  Similarity=-0.002  Sum_probs=39.8

Q ss_pred             cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          222 RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       222 ~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      ....||+|.+|+.+++++|+    .+||||+. .|+++|+++|+++++++..+.
T Consensus       112 ~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~-~Di~~A~~aG~~~i~v~~~~~  164 (176)
T 2fpr_A          112 CDCRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRETL  164 (176)
T ss_dssp             CSSSTTSCGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTTTB
T ss_pred             ccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHcCCeEEEEcCCcc
Confidence            34579999999999999998    69999996 899999999999999977654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.44  E-value=2.1e-14  Score=129.62  Aligned_cols=95  Identities=7%  Similarity=-0.004  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHH-HHHh-cCcccccCCCCHHHHHHHHHHhCC-----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK-FEKL-GGEVRWMGKPDKLWATLFTMILRV-----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~-~e~~-g~e~~~~GKP~p~if~~Al~~lg~-----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+.......   +...++..+ |+.+ +.+....|||+|.+|+.+++++|+     +
T Consensus       113 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          113 IPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPA---LIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH---HHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CcCHHHHHHHHHHcCCeEEEEeCCchHHHHHH---HHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            467888898888899885 7888765432211   111122233 4443 556678899999999999999997     3


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +||||+. +||++|+++|+.++++..-
T Consensus       190 i~vGD~~-~Di~~a~~aG~~~v~v~~g  215 (277)
T 3iru_A          190 IKVDDTL-PGIEEGLRAGMWTVGVSCS  215 (277)
T ss_dssp             EEEESSH-HHHHHHHHTTCEEEEECSS
T ss_pred             EEEcCCH-HHHHHHHHCCCeEEEEecC
Confidence            8999996 8999999999999999765

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.44  E-value=3.5e-14  Score=122.41  Aligned_cols=96  Identities=15%  Similarity=0.151  Sum_probs=75.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  166 (214)
T 3e58_A           90 IFPDVLKVLNEVKSQGLEIGLASSSVKADIFR---ALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL  166 (214)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             cCchHHHHHHHHHHCCCCEEEEeCCcHHHHHH---HHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence            3467889999988899885 788876643322   12233455566664 666778899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +|||+ .+|+.+|+++|+.+++++..
T Consensus       167 ~iGD~-~~Di~~a~~aG~~~~~~~~~  191 (214)
T 3e58_A          167 IIEDS-EKGIAAGVAADVEVWAIRDN  191 (214)
T ss_dssp             EEECS-HHHHHHHHHTTCEEEEECCS
T ss_pred             EEecc-HhhHHHHHHCCCEEEEECCC
Confidence            99999 58999999999999999863

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.44  E-value=5.7e-14  Score=123.33  Aligned_cols=94  Identities=10%  Similarity=-0.008  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.+.|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    +++
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~  169 (233)
T 3s6j_A           93 LPGAVELLETLDKENLKWCIATSGGIDTATI---NLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLV  169 (233)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEECSSCHHHHHH---HHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEeCCchhhHHH---HHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEE
Confidence            467888899888899886 778876543321   12333355556654 556677899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. +|+++|+++|+.++++..
T Consensus       170 iGD~~-~Di~~a~~aG~~~i~v~~  192 (233)
T 3s6j_A          170 IGDAI-WDMLAARRCKATGVGLLS  192 (233)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEEGG
T ss_pred             EeCCH-HhHHHHHHCCCEEEEEeC
Confidence            99996 899999999999999964

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.43  E-value=1.8e-14  Score=126.67  Aligned_cols=91  Identities=20%  Similarity=0.139  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHhCCCc-EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++ .+ .++||.+...        ...++..+|+.+ +++....+||+|.+|+.+++++|+    +++
T Consensus       107 ~~~~~~~l~~l~~~-~~~~i~t~~~~~l--------~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          107 FPEVQPTLEILAKT-FTLGVITNGNADV--------RRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CTTHHHHHHHHHTT-SEEEEEESSCCCG--------GGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHhC-CeEEEEECCchhh--------hhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            46788888887766 66 4789876541        222355666653 556677899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecch
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      |||++.+||++|+++|+.+++++.-.
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~v~~~~  203 (230)
T 3vay_A          178 VGDHPSDDIAGAQQAGMRAIWYNPQG  203 (230)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred             EeCChHHHHHHHHHCCCEEEEEcCCC
Confidence            99997689999999999999997643

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.42  E-value=8.6e-14  Score=120.29  Aligned_cols=95  Identities=9%  Similarity=0.020  Sum_probs=72.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+.++| ++ ++||.+.......   +...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus        87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~---l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  162 (200)
T 3cnh_A           87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYR---IRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV  162 (200)
T ss_dssp             BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHH---HHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHH---HHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4689999999988889 75 7898765433211   1111244445543 445567899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +|||++ +|+++|+++|+.+++++.-
T Consensus       163 ~vgD~~-~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          163 MVDDRL-QNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             EEESCH-HHHHHHHHTTCEEEECSCH
T ss_pred             EeCCCH-HHHHHHHHCCCEEEEECCc
Confidence            999996 7999999999999999764

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.42  E-value=4.2e-14  Score=125.33  Aligned_cols=94  Identities=17%  Similarity=0.085  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|.++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .++
T Consensus        85 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  161 (222)
T 2nyv_A           85 YPEIPYTLEALKSKGFKLAVVSNKLEELSKK---ILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALI  161 (222)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCCCHHHHHH---HHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEE
Confidence            477889999888899985 889876543321   12222355566654 566677899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+ .+|+.+|+++|+.++++..
T Consensus       162 vGD~-~~Di~~a~~aG~~~i~v~~  184 (222)
T 2nyv_A          162 VGDT-DADIEAGKRAGTKTALALW  184 (222)
T ss_dssp             EESS-HHHHHHHHHHTCEEEEETT
T ss_pred             ECCC-HHHHHHHHHCCCeEEEEcC
Confidence            9999 6899999999999999863

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.42  E-value=7.9e-14  Score=123.33  Aligned_cols=95  Identities=11%  Similarity=0.013  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    .++
T Consensus       106 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~  182 (237)
T 4ex6_A          106 YPGVLEGLDRLSAAGFRLAMATSKVEKAARA---IAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVV  182 (237)
T ss_dssp             CTTHHHHHHHHHHTTEEEEEECSSCHHHHHH---HHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHhCCCcEEEEcCCChHHHHH---HHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            467888999888889885 788876543321   12222355556664 667778899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||++ +||++|+++|++++++..-
T Consensus       183 vGD~~-~Di~~a~~aG~~~i~v~~g  206 (237)
T 4ex6_A          183 IGDGV-PDAEMGRAAGMTVIGVSYG  206 (237)
T ss_dssp             EESSH-HHHHHHHHTTCEEEEESSS
T ss_pred             EcCCH-HHHHHHHHCCCeEEEEecC
Confidence            99996 8999999999999999643

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.40  E-value=6.7e-14  Score=122.86  Aligned_cols=96  Identities=13%  Similarity=0.145  Sum_probs=74.1

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus        97 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  173 (230)
T 3um9_A           97 PFADVPQALQQLRAAGLKTAILSNGSRHSIRQ---VVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL  173 (230)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHH---HHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence            3577888999988899985 789876543221   12222344555553 566678899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +|||+. +||++|+++|+.+++++.-
T Consensus       174 ~iGD~~-~Di~~a~~aG~~~~~~~~~  198 (230)
T 3um9_A          174 FVSCNS-WDATGAKYFGYPVCWINRS  198 (230)
T ss_dssp             EEESCH-HHHHHHHHHTCCEEEECTT
T ss_pred             EEeCCH-HHHHHHHHCCCEEEEEeCC
Confidence            999996 8999999999999998753

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.39  E-value=6e-14  Score=124.74  Aligned_cols=94  Identities=12%  Similarity=0.099  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCCe-----E
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQ-----M  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~-----l  243 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+.     +
T Consensus       112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  188 (240)
T 3sd7_A          112 YENMKEILEMLYKNGKILLVATSKPTVFAET---ILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI  188 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHH---HHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCcHHHHHH---HHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence            467888999888899985 778864433221   12223355556653 5666788999999999999999985     9


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +|||++ +|+++|+++|+.+++++.
T Consensus       189 ~vGD~~-~Di~~a~~aG~~~i~v~~  212 (240)
T 3sd7_A          189 MVGDRK-YDIIGAKKIGIDSIGVLY  212 (240)
T ss_dssp             EEESSH-HHHHHHHHHTCEEEEESS
T ss_pred             EECCCH-HHHHHHHHCCCCEEEEeC
Confidence            999996 899999999999999973

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.39  E-value=8.3e-13  Score=116.21  Aligned_cols=95  Identities=13%  Similarity=0.108  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    +++
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (233)
T 3umb_A          101 FPENVPVLRQLREMGLPLGILSNGNPQMLEI---AVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF  177 (233)
T ss_dssp             CTTHHHHHHHHHTTTCCEEEEESSCHHHHHH---HHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred             CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH---HHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence            467888999888889885 789977643322   13333455666664 667778899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+ .+|+.+|+++|+.+++++..
T Consensus       178 vGD~-~~Di~~a~~~G~~~~~v~~~  201 (233)
T 3umb_A          178 VSSN-GWDACGATWHGFTTFWINRL  201 (233)
T ss_dssp             EESC-HHHHHHHHHHTCEEEEECTT
T ss_pred             EeCC-HHHHHHHHHcCCEEEEEcCC
Confidence            9999 68999999999999998653

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.38  E-value=3.8e-13  Score=116.34  Aligned_cols=97  Identities=10%  Similarity=0.084  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC-ChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP-GTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~-G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      ++++.++++.+.++|.++ ++||.+.......   ... .++..+|+.+ +++....+||+|.+|..+++++|+    .+
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (206)
T 2b0c_A           93 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW---PEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTV  169 (206)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCTTSCC---GGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEECCChHHHHHH---HHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            488999999988899985 7898765543321   212 2466666664 555667899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||++ .|+++|+++|+.+++++....
T Consensus       170 ~vgD~~-~Di~~a~~aG~~~~~~~~~~~  196 (206)
T 2b0c_A          170 FFDDNA-DNIEGANQLGITSILVKDKTT  196 (206)
T ss_dssp             EEESCH-HHHHHHHTTTCEEEECCSTTH
T ss_pred             EeCCCH-HHHHHHHHcCCeEEEecCCch
Confidence            999996 699999999999999987554

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.38  E-value=1.4e-12  Score=110.12  Aligned_cols=43  Identities=5%  Similarity=-0.123  Sum_probs=37.0

Q ss_pred             CCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          225 GKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       225 GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +||+|.+|+.+++++++    .+||||++ +|+.+|+++|+.+++.+.
T Consensus        82 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~ag~~~~~~~~  128 (162)
T 2p9j_A           82 SYKKLEIYEKIKEKYSLKDEEIGFIGDDV-VDIEVMKKVGFPVAVRNA  128 (162)
T ss_dssp             C--CHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSEEEECTTS
T ss_pred             CCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEecCc
Confidence            69999999999999998    69999997 899999999999886654

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.37  E-value=1.2e-13  Score=120.27  Aligned_cols=93  Identities=14%  Similarity=0.105  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++ .++ ++||........   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .++
T Consensus        85 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           85 YPGITSLFEQLPSE-LRLGIVTSQRRNELES---GMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             CTTHHHHHHHSCTT-SEEEEECSSCHHHHHH---HHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHhc-CcEEEEeCCCHHHHHH---HHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            36778888887777 775 788876543221   23333455666654 556667899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+ .+|+++|+++|+.+++++.
T Consensus       161 vGD~-~~Di~~a~~aG~~~~~~~~  183 (209)
T 2hdo_A          161 IGDS-VSDEQTAQAANVDFGLAVW  183 (209)
T ss_dssp             EESS-HHHHHHHHHHTCEEEEEGG
T ss_pred             ECCC-hhhHHHHHHcCCeEEEEcC
Confidence            9999 6899999999999999973

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.37  E-value=1.1e-13  Score=121.38  Aligned_cols=99  Identities=12%  Similarity=0.050  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceecc-ceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEAR-ALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~-~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      ++++.++++.+.++|.++ ++||.+ .++... ...+...++..+|+.+ +.+....+||+|.+|+.+++++|+    ++
T Consensus       101 ~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  179 (235)
T 2om6_A          101 LEGTKEALQFVKERGLKTAVIGNVM-FWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL  179 (235)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCC-SSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCc-ccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE
Confidence            678899999988889885 788876 221110 0011112234444443 445567799999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      +|||++.+|+++|+++|+.+++++.-+
T Consensus       180 ~iGD~~~nDi~~a~~aG~~~~~~~~~~  206 (235)
T 2om6_A          180 HIGDTYAEDYQGARKVGMWAVWINQEG  206 (235)
T ss_dssp             EEESCTTTTHHHHHHTTSEEEEECTTC
T ss_pred             EECCChHHHHHHHHHCCCEEEEECCCC
Confidence            999996589999999999999997653

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.37  E-value=1.4e-13  Score=119.74  Aligned_cols=94  Identities=10%  Similarity=0.005  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH--HHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF--EKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~--e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+......   .+...++..+|  +.+ +.+. ..+||+|.+|+.+++++|+    +
T Consensus        72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~~~  147 (205)
T 3m9l_A           72 APGAVELVRELAGRGYRLGILTRNARELAHV---TLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPSRM  147 (205)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             CccHHHHHHHHHhcCCeEEEEeCCchHHHHH---HHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHHHE
Confidence            366788898888899985 788876543322   12333456667  554 4444 7899999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|||+. +|+++|+++|++++++...
T Consensus       148 i~iGD~~-~Di~~a~~aG~~~i~v~~~  173 (205)
T 3m9l_A          148 VMVGDYR-FDLDCGRAAGTRTVLVNLP  173 (205)
T ss_dssp             EEEESSH-HHHHHHHHHTCEEEECSSS
T ss_pred             EEECCCH-HHHHHHHHcCCEEEEEeCC
Confidence            9999996 8999999999999999654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.36  E-value=1.5e-13  Score=122.60  Aligned_cols=93  Identities=13%  Similarity=0.037  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.+.++ .++ ++||.+.......   +...++.  |+.+ +.+....+||+|.+|+.+++++|+    +++
T Consensus       122 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~---l~~~g~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          122 WPDTLAGMHALKAD-YWLAALSNGNTALMLDV---ARHAGLP--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             CTTHHHHHHHHTTT-SEEEECCSSCHHHHHHH---HHHHTCC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHH---HHHcCCC--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            57788888887554 664 7788765432211   1100111  4443 445667899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecch
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      |||+ .+||++|+++|+.++++++..
T Consensus       196 iGD~-~~Di~~a~~aG~~~~~~~~~~  220 (254)
T 3umc_A          196 CAAH-NYDLKAARALGLKTAFIARPL  220 (254)
T ss_dssp             EESC-HHHHHHHHHTTCEEEEECCTT
T ss_pred             EcCc-hHhHHHHHHCCCeEEEEecCC
Confidence            9999 689999999999999999643

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.35  E-value=1.5e-12  Score=127.69  Aligned_cols=44  Identities=30%  Similarity=0.342  Sum_probs=40.4

Q ss_pred             CccEEEEeccceeecCC-------------ccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           29 RFKAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~-------------~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      ++++++||+||||+...             .++||+.++|+.|+++|++++++||++
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999999999999765             479999999999999999999999964

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.35  E-value=2.7e-13  Score=120.87  Aligned_cols=95  Identities=13%  Similarity=0.135  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.++++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|..+++++|+    .++
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~  172 (241)
T 2hoq_A           96 VPGARKVLIRLKELGYELGIITDGNPVKQWE---KILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALM  172 (241)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEEECSCHHHHHH---HHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEECCCchhHHH---HHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            477888999888889885 889876543321   12222355566653 556677899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||++.+|+++|+++|+.++++..
T Consensus       173 iGD~~~~Di~~a~~aG~~~~~v~~  196 (241)
T 2hoq_A          173 VGDRLYSDIYGAKRVGMKTVWFRY  196 (241)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEECC
T ss_pred             ECCCchHhHHHHHHCCCEEEEECC
Confidence            999976899999999999999954

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.35  E-value=7.8e-14  Score=122.73  Aligned_cols=98  Identities=14%  Similarity=0.128  Sum_probs=73.9

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.+.++ .++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus       101 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~---~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (234)
T 3u26_A          101 LYPEVVEVLKSLKGK-YHVGMITDSDTEQAMA---FLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV  176 (234)
T ss_dssp             BCTTHHHHHHHHTTT-SEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             cCcCHHHHHHHHHhC-CcEEEEECCCHHHHHH---HHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence            347788899888777 775 789877643321   12222344555553 555567799999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||++.+||++|+++|+.+++++.-+.
T Consensus       177 ~vGD~~~~Di~~a~~aG~~~~~v~~~~~  204 (234)
T 3u26_A          177 YVGDNPVKDCGGSKNLGMTSILLDRKGE  204 (234)
T ss_dssp             EEESCTTTTHHHHHTTTCEEEEECSSST
T ss_pred             EEcCCcHHHHHHHHHcCCEEEEECCCCC
Confidence            9999976899999999999999976543

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.34  E-value=2.9e-13  Score=120.15  Aligned_cols=95  Identities=13%  Similarity=0.077  Sum_probs=68.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.+.++ .++ ++||.+.......   +...++.  |+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus       117 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~---l~~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  190 (254)
T 3umg_A          117 PWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDM---AKNAGIP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVM  190 (254)
T ss_dssp             BCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHH---HHHHTCC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred             CCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHH---HHhCCCC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            357788888887665 664 7788765432211   1100111  3332 445567899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||+ .+||++|+++|+.++++++...
T Consensus       191 ~iGD~-~~Di~~a~~aG~~~~~~~~~~~  217 (254)
T 3umg_A          191 LAAAH-NGDLEAAHATGLATAFILRPVE  217 (254)
T ss_dssp             EEESC-HHHHHHHHHTTCEEEEECCTTT
T ss_pred             EEeCC-hHhHHHHHHCCCEEEEEecCCc
Confidence            99999 5899999999999999986443

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.34  E-value=4.2e-13  Score=122.98  Aligned_cols=94  Identities=10%  Similarity=-0.019  Sum_probs=63.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCC--------hhHHHHHHhcCcccccCCCCHHHHHHHHHHhC
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG--------TLASKFEKLGGEVRWMGKPDKLWATLFTMILR  240 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G--------~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg  240 (332)
                      .|+++.++++.    |.++ |+||.+.......-.....|        ++..+|+..-.....-+||+|++|..+++++|
T Consensus       126 ~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~lg  201 (253)
T 2g80_A          126 VYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIG  201 (253)
T ss_dssp             CCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHcC
Confidence            46888888875    8885 89998765322100001012        23333322100011026999999999999999


Q ss_pred             C----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          241 V----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       241 ~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +    ++||||++ .||++|+++||+++++++
T Consensus       202 ~~p~~~l~vgDs~-~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          202 AKASEVLFLSDNP-LELDAAAGVGIATGLASR  232 (253)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHTTTCEEEEECC
T ss_pred             CCcccEEEEcCCH-HHHHHHHHcCCEEEEEcC
Confidence            8    69999996 799999999999999976

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.33  E-value=3.4e-13  Score=115.17  Aligned_cols=95  Identities=12%  Similarity=0.167  Sum_probs=71.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQL  245 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmI  245 (332)
                      .++++.++++.+.++|.++ ++||.+... . .  .+...++..+|+.+ +++....+||+|.+|+.+++++|+  .++|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~-~--~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  158 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRNDQV-L-E--ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVI  158 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHH-H-H--HHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcHHH-H-H--HHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCCeEEEE
Confidence            4577889999888889885 778865321 1 1  12222344445543 445567899999999999999998  6999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecc
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||+. +|+++|+++|+.+++++..
T Consensus       159 GD~~-~Di~~a~~aG~~~~~~~~~  181 (190)
T 2fi1_A          159 GDRP-IDIEAGQAAGLDTHLFTSI  181 (190)
T ss_dssp             ESSH-HHHHHHHHTTCEEEECSCH
T ss_pred             cCCH-HHHHHHHHcCCeEEEECCC
Confidence            9995 8999999999999999753

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.33  E-value=1.4e-12  Score=113.32  Aligned_cols=95  Identities=12%  Similarity=0.113  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC------ChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC-
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP------GTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV-  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~------G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~-  241 (332)
                      ++++.++++.+.+ |.++ ++||.+......   .+..      .++..+|+.+ +++....+||+|.+|..+++++|+ 
T Consensus        91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~---~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  166 (211)
T 2i6x_A           91 SAEKFDYIDSLRP-DYRLFLLSNTNPYVLDL---AMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMK  166 (211)
T ss_dssp             CHHHHHHHHHHTT-TSEEEEEECCCHHHHHH---HTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHHCCC
T ss_pred             ChHHHHHHHHHHc-CCeEEEEeCCCHHHHHH---HHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHHhCCC
Confidence            4889999998877 8875 789876543321   1222      3466666654 556667899999999999999998 


Q ss_pred             ---eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          242 ---QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       242 ---~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                         +++|||++ .|+.+|+++|+.+++++...
T Consensus       167 ~~~~~~igD~~-~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          167 PEETLFIDDGP-ANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             GGGEEEECSCH-HHHHHHHHTTCEEECCCTTC
T ss_pred             hHHeEEeCCCH-HHHHHHHHcCCEEEEECCHH
Confidence               59999996 59999999999999997543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.33  E-value=1.5e-13  Score=120.14  Aligned_cols=91  Identities=14%  Similarity=0.128  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHhCC-CcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g-~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.+.++| .++ ++||.+.......   +...++..+|+    .....+||+|.+|+.+++++|+    +++
T Consensus       107 ~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~---l~~~~~~~~f~----~~~~~~kpk~~~~~~~~~~lgi~~~~~i~  179 (234)
T 3ddh_A          107 LPGVKETLKTLKETGKYKLVVATKGDLLDQENK---LERSGLSPYFD----HIEVMSDKTEKEYLRLLSILQIAPSELLM  179 (234)
T ss_dssp             CTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHH---HHHHTCGGGCS----EEEEESCCSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccHHHHHHHHHhCCCeEEEEEeCCchHHHHHH---HHHhCcHhhhh----eeeecCCCCHHHHHHHHHHhCCCcceEEE
Confidence            577888898888888 885 7787655322110   11111222222    1234689999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||++.+||++|+++|+.++++..
T Consensus       180 iGD~~~~Di~~a~~aG~~~v~v~~  203 (234)
T 3ddh_A          180 VGNSFKSDIQPVLSLGGYGVHIPF  203 (234)
T ss_dssp             EESCCCCCCHHHHHHTCEEEECCC
T ss_pred             ECCCcHHHhHHHHHCCCeEEEecC
Confidence            999976899999999999999943

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.32  E-value=4.2e-13  Score=120.56  Aligned_cols=94  Identities=13%  Similarity=0.076  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .++
T Consensus       116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  192 (243)
T 2hsz_A          116 YPNVKETLEALKAQGYILAVVTNKPTKHVQP---ILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  192 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEECCcHHHHHH---HHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEE
Confidence            366888998888899986 889876543221   12222344555553 556667799999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. +|+.+|+++|+.+++++.
T Consensus       193 vGD~~-~Di~~a~~aG~~~i~v~~  215 (243)
T 2hsz_A          193 VGDSQ-NDIFAAHSAGCAVVGLTY  215 (243)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESS
T ss_pred             EcCCH-HHHHHHHHCCCeEEEEcC
Confidence            99995 899999999999999965

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.30  E-value=2.5e-13  Score=133.30  Aligned_cols=100  Identities=13%  Similarity=0.083  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC--ChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP--GTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~--G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----  241 (332)
                      .++++.++++.|+++|.++ |+||.......... .+..  .++..+|+.+ +++....+||+|++|+.+++++|+    
T Consensus       101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~-~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~  179 (555)
T 3i28_A          101 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERD-GLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE  179 (555)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHH-HHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             cChhHHHHHHHHHHCCCEEEEEeCCCccccchhh-HHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCChhH
Confidence            3588999999999999986 88997211111100 0111  1345556654 667778899999999999999998    


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      .+||||+. .||++|+++||+++|++....
T Consensus       180 ~~~v~D~~-~di~~a~~aG~~~~~~~~~~~  208 (555)
T 3i28_A          180 VVFLDDIG-ANLKPARDLGMVTILVQDTDT  208 (555)
T ss_dssp             EEEEESCH-HHHHHHHHHTCEEEECSSHHH
T ss_pred             EEEECCcH-HHHHHHHHcCCEEEEECCCcc
Confidence            69999995 799999999999999987544

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.28  E-value=5.4e-12  Score=110.46  Aligned_cols=52  Identities=27%  Similarity=0.360  Sum_probs=43.4

Q ss_pred             cHHHHhhhcCccEEEEeccceeecCCccC----cCHHHH-------HHHHHHCCCeEEEEeCCCC
Q 019991           20 GLRHIAETRRFKAWLLDQFGVLHDGKKPY----PGAIST-------LEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        20 ~~~~~~~~~~~~~vlfDlDGvL~~g~~~i----pGa~e~-------L~~L~~~G~~v~~vTN~s~   73 (332)
                      ++.+.+.  ++++++||+||||+++...+    +++.++       |+.|+++|++++++||+++
T Consensus        11 ~~~~~~~--~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~   73 (191)
T 3n1u_A           11 ELLEKAK--KIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQN   73 (191)
T ss_dssp             HHHHHHH--TCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred             HHHHHHh--cCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcCh
Confidence            5666777  89999999999999976555    456667       9999999999999999754

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.28  E-value=1.3e-12  Score=117.24  Aligned_cols=91  Identities=10%  Similarity=0.069  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      ++++.++++.+. +|.++ ++||.+.......   +...++..+|+.    ....+||+|.+|..+++++|+    +++|
T Consensus       114 ~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~---l~~~~l~~~f~~----i~~~~kp~~~~~~~~~~~l~~~~~~~i~i  185 (251)
T 2pke_A          114 IAGVREAVAAIA-ADYAVVLITKGDLFHQEQK---IEQSGLSDLFPR----IEVVSEKDPQTYARVLSEFDLPAERFVMI  185 (251)
T ss_dssp             CTTHHHHHHHHH-TTSEEEEEEESCHHHHHHH---HHHHSGGGTCCC----EEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CccHHHHHHHHH-CCCEEEEEeCCCHHHHHHH---HHHcCcHHhCce----eeeeCCCCHHHHHHHHHHhCcCchhEEEE
Confidence            477889998887 88885 7888654322110   111112222221    233589999999999999998    5999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecc
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||++.+|+++|+++|+.+++++.-
T Consensus       186 GD~~~~Di~~a~~aG~~~~~v~~~  209 (251)
T 2pke_A          186 GNSLRSDVEPVLAIGGWGIYTPYA  209 (251)
T ss_dssp             ESCCCCCCHHHHHTTCEEEECCCC
T ss_pred             CCCchhhHHHHHHCCCEEEEECCC
Confidence            999658999999999999999643

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.27  E-value=1.4e-12  Score=113.51  Aligned_cols=93  Identities=13%  Similarity=0.038  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.+.|.++ ++||....  . .  .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    +++
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~--~-~--~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~  167 (221)
T 2wf7_A           93 YPGILQLLKDLRSNKIKIALASASKNG--P-F--LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIG  167 (221)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTTH--H-H--HHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCcHHH--H-H--HHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence            356778888888889886 67776211  1 1  11222344555553 556677899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+. +|+++|+++|+.+++++..
T Consensus       168 iGD~~-nDi~~a~~aG~~~~~~~~~  191 (221)
T 2wf7_A          168 LEDSQ-AGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESCH
T ss_pred             EeCCH-HHHHHHHHCCCEEEEECCH
Confidence            99996 8999999999999999764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.27  E-value=2.7e-11  Score=104.85  Aligned_cols=44  Identities=23%  Similarity=0.114  Sum_probs=39.6

Q ss_pred             CccEEEEeccceeecC-------------------------CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           29 RFKAWLLDQFGVLHDG-------------------------KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g-------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      .+++++||+|||||+.                         ..++||+.++|+.|+++|++++++||++
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~   94 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTS   94 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCC
Confidence            5799999999999942                         3679999999999999999999999975

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.26  E-value=3.7e-12  Score=107.67  Aligned_cols=43  Identities=5%  Similarity=-0.190  Sum_probs=38.7

Q ss_pred             CCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          226 KPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       226 KP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||+|.++..+++++|+    .+||||++ +|+.+|+++|+.++..+..
T Consensus        78 kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~~~~~  124 (164)
T 3e8m_A           78 VDKLSAAEELCNELGINLEQVAYIGDDL-NDAKLLKRVGIAGVPASAP  124 (164)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHHHHTTSSEEECCTTSC
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEcCChH
Confidence            9999999999999997    69999996 8999999999988775543

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.23  E-value=1.1e-11  Score=113.23  Aligned_cols=96  Identities=11%  Similarity=-0.018  Sum_probs=69.3

Q ss_pred             CHHHHHHHHHHHHhCCC--cE-EEecCCccceeccceecCCChhHHHHHHh-cCc----ccccCCCCHHHHHHHHHHhCC
Q 019991          170 SLQDLEKILEICASKKI--PM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGE----VRWMGKPDKLWATLFTMILRV  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~--~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e----~~~~GKP~p~if~~Al~~lg~  241 (332)
                      .++++.++++.+.++|.  ++ |+||.+.......   +...++..+|+.+ +.+    ....+||+|.+|+.+++++|+
T Consensus       143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~---l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          143 PDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRC---LRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHH---HHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cChhHHHHHHHHHhCCCCceEEEEECCChHHHHHH---HHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            46899999999989998  85 7898765433221   1111233444442 222    236789999999999999997


Q ss_pred             -----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 -----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 -----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                           +++|||++ +||.+|+++|+.+++.+..
T Consensus       220 ~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~  251 (282)
T 3nuq_A          220 ARYENAYFIDDSG-KNIETGIKLGMKTCIHLVE  251 (282)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHHTCSEEEEECS
T ss_pred             CCcccEEEEcCCH-HHHHHHHHCCCeEEEEEcC
Confidence                 48999996 8999999999966655443

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.21  E-value=1.3e-12  Score=111.66  Aligned_cols=94  Identities=10%  Similarity=0.056  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.+.++|.++ ++||....... .   +..-++...|+.+ +.+....+||+|.+|+.+++++|+    .++
T Consensus        87 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~---~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~  162 (207)
T 2go7_A           87 MPGAREVLAWADESGIQQFIYTHKGNNAFT-I---LKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  162 (207)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTHHHH-H---HHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCchHHHH-H---HHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEE
Confidence            467888998888889885 77886654322 1   1111223334443 445566789999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+ .+|+.+|+++|+.+++++.-
T Consensus       163 iGD~-~nDi~~~~~aG~~~i~~~~~  186 (207)
T 2go7_A          163 IGDR-TLDVEFAQNSGIQSINFLES  186 (207)
T ss_dssp             EESS-HHHHHHHHHHTCEEEESSCC
T ss_pred             ECCC-HHHHHHHHHCCCeEEEEecC
Confidence            9999 68999999999999999643

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.19  E-value=1.4e-11  Score=106.94  Aligned_cols=94  Identities=16%  Similarity=0.139  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      +++.++++.+.+.|.++ ++||........   .+...++..+|+.+ +.+....+||+|..++.+++++|+    .++|
T Consensus        97 ~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~i  173 (226)
T 1te2_A           97 PGVREAVALCKEQGLLVGLASASPLHMLEK---VLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL  173 (226)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred             ccHHHHHHHHHHCCCcEEEEeCCcHHHHHH---HHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence            55777888887888875 778865442221   11112234444443 555667899999999999999998    5999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecc
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ||+. +|+++|+++|+.+++++.-
T Consensus       174 GD~~-nDi~~a~~aG~~~~~~~~~  196 (226)
T 1te2_A          174 EDSV-NGMIASKAARMRSIVVPAP  196 (226)
T ss_dssp             ESSH-HHHHHHHHTTCEEEECCCT
T ss_pred             eCCH-HHHHHHHHcCCEEEEEcCC
Confidence            9996 8999999999999998653

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.19  E-value=1.5e-11  Score=110.96  Aligned_cols=96  Identities=9%  Similarity=0.024  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHh-cCcccccCCCCHHHHHHHHHHhCC-----e
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKL-GGEVRWMGKPDKLWATLFTMILRV-----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~-g~e~~~~GKP~p~if~~Al~~lg~-----~  242 (332)
                      ++++.++++.+.++|.++ ++||.+.......   +...++..++ +.+ +.+....+||+|..|..+++++|+     +
T Consensus       105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  181 (267)
T 1swv_A          105 INGVKEVIASLRERGIKIGSTTGYTREMMDIV---AKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM  181 (267)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHH---HHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGE
T ss_pred             CccHHHHHHHHHHcCCeEEEEcCCCHHHHHHH---HHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCE
Confidence            466788888888889885 6787654322110   1111122222 322 345566799999999999999997     4


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ++|||+. +|+++|+++|+.++++..-+
T Consensus       182 i~iGD~~-nDi~~a~~aG~~~i~v~~~~  208 (267)
T 1swv_A          182 IKVGDTV-SDMKEGRNAGMWTVGVILGS  208 (267)
T ss_dssp             EEEESSH-HHHHHHHHTTSEEEEECTTC
T ss_pred             EEEeCCH-HHHHHHHHCCCEEEEEcCCC
Confidence            8999996 89999999999999997553

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.16  E-value=1.2e-11  Score=107.78  Aligned_cols=47  Identities=4%  Similarity=0.078  Sum_probs=41.3

Q ss_pred             cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecch
Q 019991          222 RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       222 ~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      ...|||+|.+|+.+++++|+    .++|||++ +|+.+|+++|+.+++ +...
T Consensus       137 ~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~-~Di~~a~~aG~~~~~-~~~~  187 (217)
T 3m1y_A          137 MMFSHSKGEMLLVLQRLLNISKTNTLVVGDGA-NDLSMFKHAHIKIAF-NAKE  187 (217)
T ss_dssp             CCSTTHHHHHHHHHHHHHTCCSTTEEEEECSG-GGHHHHTTCSEEEEE-SCCH
T ss_pred             CCCCCChHHHHHHHHHHcCCCHhHEEEEeCCH-HHHHHHHHCCCeEEE-CccH
Confidence            34689999999999999998    69999996 799999999999887 5543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.15  E-value=6e-11  Score=103.17  Aligned_cols=43  Identities=7%  Similarity=-0.061  Sum_probs=38.6

Q ss_pred             CCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          225 GKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       225 GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +||+|.+++.+++++|+    .+||||+. +|+.+|+++|+.+++.+.
T Consensus        99 ~kpk~~~~~~~~~~~g~~~~~~~~iGD~~-~Di~~a~~ag~~~~~~~~  145 (188)
T 2r8e_A           99 QSNKLIAFSDLLEKLAIAPENVAYVGDDL-IDWPVMEKVGLSVAVADA  145 (188)
T ss_dssp             CSCSHHHHHHHHHHHTCCGGGEEEEESSG-GGHHHHTTSSEEEECTTS
T ss_pred             CCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCEEEecCc
Confidence            59999999999999997    69999996 899999999999887543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.13  E-value=1.2e-10  Score=100.36  Aligned_cols=42  Identities=7%  Similarity=-0.078  Sum_probs=37.7

Q ss_pred             CCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          226 KPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       226 KP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||+|..++.+++++|+    ++||||+. +|+.+|+++|+..++.+.
T Consensus        82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~~~~  127 (180)
T 1k1e_A           82 LEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAFAACGTSFAVADA  127 (180)
T ss_dssp             SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEECTTS
T ss_pred             CCcHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCCeEEeCCc
Confidence            8999999999999987    69999996 899999999999886543

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.11  E-value=2e-11  Score=105.90  Aligned_cols=93  Identities=15%  Similarity=0.083  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      +++.++++.+.++|.++ ++||.........   +...++...|+.+ +.+....+||+|.+|..+++++|+    .++|
T Consensus        92 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~i  168 (225)
T 3d6j_A           92 PDTLPTLTHLKKQGIRIGIISTKYRFRILSF---LRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYI  168 (225)
T ss_dssp             TTHHHHHHHHHHHTCEEEEECSSCHHHHHHH---HHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred             cCHHHHHHHHHHCCCeEEEEECCCHHHHHHH---HHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEE
Confidence            56778888877788875 7788654332211   1111233334443 445566789999999999999998    5999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEec
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||+. +|+.+|+++|+.++++..
T Consensus       169 GD~~-nDi~~~~~aG~~~~~~~~  190 (225)
T 3d6j_A          169 GDST-VDAGTAAAAGVSFTGVTS  190 (225)
T ss_dssp             ESSH-HHHHHHHHHTCEEEEETT
T ss_pred             cCCH-HHHHHHHHCCCeEEEECC
Confidence            9995 899999999999999754

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.10  E-value=6.9e-12  Score=114.78  Aligned_cols=94  Identities=11%  Similarity=-0.038  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC------
Q 019991          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV------  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~-g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~------  241 (332)
                      ++++.++++.+.++ |.++ ++||.........   +....+. .|+.+ +++....+||+|.+|..+++++|+      
T Consensus       116 ~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~---l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  191 (275)
T 2qlt_A          116 VPGAVKLCNALNALPKEKWAVATSGTRDMAKKW---FDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQD  191 (275)
T ss_dssp             CTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHH---HHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSC
T ss_pred             CcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHH---HHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCccccC
Confidence            46778888888777 8885 7888665432211   1100111 13332 445567899999999999999998      


Q ss_pred             -----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 -----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 -----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                           +++|||++ +|+++|+++|+.++++..-
T Consensus       192 ~~~~~~i~~GDs~-nDi~~a~~AG~~~i~v~~~  223 (275)
T 2qlt_A          192 PSKSKVVVFEDAP-AGIAAGKAAGCKIVGIATT  223 (275)
T ss_dssp             GGGSCEEEEESSH-HHHHHHHHTTCEEEEESSS
T ss_pred             CCcceEEEEeCCH-HHHHHHHHcCCEEEEECCC
Confidence                 58999996 8999999999999998654

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.08  E-value=5.3e-11  Score=104.12  Aligned_cols=94  Identities=11%  Similarity=0.030  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHH-HHh-cCcccccC--CCCHHHHHHHHHHhCC----eE
Q 019991          172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKF-EKL-GGEVRWMG--KPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~-e~~-g~e~~~~G--KP~p~if~~Al~~lg~----~l  243 (332)
                      +++.+.++.+..  ...++||........   .+...++..+| +.+ +.+....+  ||+|..|+.+++++|+    ++
T Consensus        90 ~~~~~~l~~l~~--~~~i~s~~~~~~~~~---~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i  164 (229)
T 2fdr_A           90 DGVKFALSRLTT--PRCICSNSSSHRLDM---MLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVV  164 (229)
T ss_dssp             TTHHHHHHHCCS--CEEEEESSCHHHHHH---HHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             cCHHHHHHHhCC--CEEEEECCChhHHHH---HHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeE
Confidence            456666765432  335778865543221   11122344455 443 44445678  9999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      +|||+. .|+++|+++|+.+++++....
T Consensus       165 ~iGD~~-~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          165 VVEDSV-HGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             EEESSH-HHHHHHHHTTCEEEEECCSTT
T ss_pred             EEcCCH-HHHHHHHHCCCEEEEEecCCc
Confidence            999996 899999999999999976543

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=98.99  E-value=2.2e-10  Score=104.31  Aligned_cols=95  Identities=16%  Similarity=0.174  Sum_probs=73.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|++ +.++ |+||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus       122 ~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~---~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  197 (260)
T 2gfh_A          122 LADDVKAMLTELRK-EVRLLLLTNGDRQTQRE---KIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  197 (260)
T ss_dssp             CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHH---HHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCHHHHHHHHHc-CCcEEEEECcChHHHHH---HHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence            46899999998866 5775 889987654322   12222455666663 556667899999999999999998    59


Q ss_pred             EEeCChhhHHHHHHHcCC-cEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNL-DLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~-~ti~~~~  268 (332)
                      ||||+..+||++|+++|| .++|++.
T Consensus       198 ~vGDs~~~Di~~A~~aG~~~~i~v~~  223 (260)
T 2gfh_A          198 MVGDTLETDIQGGLNAGLKATVWINK  223 (260)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred             EECCCchhhHHHHHHCCCceEEEEcC
Confidence            999975789999999999 7999964

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.99  E-value=1e-08  Score=93.83  Aligned_cols=59  Identities=17%  Similarity=0.169  Sum_probs=46.1

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      |++++++||+||||+++.. +-+...++|+.++++|++++++|..+  ...+...++.+|+.
T Consensus         4 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~--~~~~~~~~~~~~~~   63 (290)
T 3dnp_A            4 MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRH--FRSAQKIAKSLKLD   63 (290)
T ss_dssp             --CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBCSSC--HHHHHHHHHHTTCC
T ss_pred             CcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEECCCC--hHHHHHHHHHcCCC
Confidence            4689999999999999775 55667899999999999999999643  33445566777776

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.98  E-value=2.2e-09  Score=98.68  Aligned_cols=191  Identities=8%  Similarity=-0.047  Sum_probs=109.9

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHH--------HHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLE--------MLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~--------~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .+++++||+||||.++. +.|...+.+.        .+++.|.+++++|.  ++...+...++.+|++..+ +.++.+  
T Consensus        21 ~~kliifDlDGTLlds~-i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tG--r~~~~~~~~~~~~g~~~~~-~~~i~~--   94 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPHT-IDEQKQQDIYELEDYLEQKSKDGELIIGWVTG--SSIESILDKMGRGKFRYFP-HFIASD--   94 (289)
T ss_dssp             CSEEEEEETBTTTBCSS-CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECS--SCHHHHHHHHHHTTCCBCC-SEEEET--
T ss_pred             CCeEEEEECCCCCcCCC-CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcC--CCHHHHHHHHHhhccCCCC-CeEeec--
Confidence            57899999999999987 6677777777        45678999988885  4445566777888886442 222221  


Q ss_pred             HHHHHHhhcCChhhhhcCCeEEEee-cCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHH
Q 019991          101 LTHQYLLRRDDAWFAALGRSCIHMT-WSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILE  179 (332)
Q Consensus       101 v~~~~L~~~~~~~~~~~G~~v~~~g-~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~  179 (332)
                                      +|..++.++ .+..   ..... .         ...             ....+.++++.++++
T Consensus        95 ----------------~g~~i~~~~~ng~~---~~~~~-~---------~~~-------------~~~~~~~~~v~e~l~  132 (289)
T 3gyg_A           95 ----------------LGTEITYFSEHNFG---QQDNK-W---------NSR-------------INEGFSKEKVEKLVK  132 (289)
T ss_dssp             ----------------TTTEEEECCSSSTT---EECHH-H---------HHH-------------HHTTCCHHHHHHHHH
T ss_pred             ----------------CCceEEEEcCCCcE---eecCc-h---------hhh-------------hcccCCHHHHHHHHH
Confidence                            022322222 0000   00000 0         000             001145677777777


Q ss_pred             HHHhC-CCcE-EEecCCccceeccceec-CC---------ChhHHHHHHhc--------------------CcccccCCC
Q 019991          180 ICASK-KIPM-VVANPDYVTVEARALRV-MP---------GTLASKFEKLG--------------------GEVRWMGKP  227 (332)
Q Consensus       180 ~l~~~-g~~l-IaTN~D~~~~~~~~~~l-~~---------G~i~~~~e~~g--------------------~e~~~~GKP  227 (332)
                      .+.++ |+++ +.|+....... ..... ..         -.+.+.++..|                    .+....+||
T Consensus       133 ~l~~~~g~~l~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (289)
T 3gyg_A          133 QLHENHNILLNPQTQLGKSRYK-HNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTG  211 (289)
T ss_dssp             HHHHHSSCCCEEGGGTCGGGTT-CCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCS
T ss_pred             HHHhhhCceeeecccccccceE-EEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCC
Confidence            76665 7664 44544221100 00000 00         01111222111                    122456899


Q ss_pred             CHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          228 DKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       228 ~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      .+..+..+++++|+    .++|||+ .+|+.+++++|+..++-+..
T Consensus       212 k~~~~~~~~~~~~~~~~~~~~~GDs-~~D~~~~~~ag~~~~~~~~~  256 (289)
T 3gyg_A          212 KNEIVTFMLEKYNLNTERAIAFGDS-GNDVRMLQTVGNGYLLKNAT  256 (289)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHTTSSEEEECTTCC
T ss_pred             HHHHHHHHHHHcCCChhhEEEEcCC-HHHHHHHHhCCcEEEECCcc
Confidence            99999999999998    6999999 58999999999776654543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.98  E-value=3.1e-08  Score=90.14  Aligned_cols=59  Identities=22%  Similarity=0.278  Sum_probs=47.2

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      |++++|+||+||||+++.. +-+...++|++++++|++++++|..+  ...+...++.+|+.
T Consensus         3 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~--~~~~~~~~~~l~~~   62 (279)
T 4dw8_A            3 LKYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRP--TYGIVPLANELRMN   62 (279)
T ss_dssp             -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHTTGG
T ss_pred             CcceEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHHhCCC
Confidence            4689999999999999874 55667899999999999999999744  34455667778774

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.96  E-value=5.9e-10  Score=98.96  Aligned_cols=91  Identities=9%  Similarity=0.061  Sum_probs=62.8

Q ss_pred             CHHHHHHHHHHHHhCCCc-EEEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC--eEEEe
Q 019991          170 SLQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV--QMQLE  246 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~--~lmIG  246 (332)
                      .|+++.++++.|+++| + .|+||.+......   .+...++..+|...    ...++|.|.+++.+++....  .+|||
T Consensus        97 ~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~---~l~~~gl~~~f~~~----~~~~~~K~~~~~~~~~~~~~~~~~~vg  168 (231)
T 2p11_A           97 VYPGALNALRHLGARG-PTVILSDGDVVFQPR---KIARSGLWDEVEGR----VLIYIHKELMLDQVMECYPARHYVMVD  168 (231)
T ss_dssp             BCTTHHHHHHHHHTTS-CEEEEEECCSSHHHH---HHHHTTHHHHTTTC----EEEESSGGGCHHHHHHHSCCSEEEEEC
T ss_pred             cCccHHHHHHHHHhCC-CEEEEeCCCHHHHHH---HHHHcCcHHhcCee----EEecCChHHHHHHHHhcCCCceEEEEc
Confidence            4578899999998889 6 4889976654332   13333455555431    11344556788877773332  69999


Q ss_pred             CChh--hHHHHHHHcCCcEEEEec
Q 019991          247 SSPY--SLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       247 Ds~~--~DI~gA~~aG~~ti~~~~  268 (332)
                      |++.  .|+++|+++|++++++..
T Consensus       169 Ds~~d~~di~~A~~aG~~~i~v~~  192 (231)
T 2p11_A          169 DKLRILAAMKKAWGARLTTVFPRQ  192 (231)
T ss_dssp             SCHHHHHHHHHHHGGGEEEEEECC
T ss_pred             CccchhhhhHHHHHcCCeEEEeCC
Confidence            9974  499999999999999965

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.95  E-value=5.3e-09  Score=95.26  Aligned_cols=61  Identities=18%  Similarity=0.223  Sum_probs=39.8

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      |++++|+||+||||+++.. +-+...++|++++++|++++++|..+  ...+...++.+|+..+
T Consensus         3 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~--~~~~~~~~~~l~~~~~   64 (279)
T 3mpo_A            3 LTIKLIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCTGRP--LTGVQPYLDAMDIDGD   64 (279)
T ss_dssp             --CCEEEECC-----------CHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHHHTTCCSS
T ss_pred             cceEEEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHcCCCCC
Confidence            4689999999999999875 55677899999999999999999643  4445667778888753

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.90  E-value=8.8e-10  Score=96.91  Aligned_cols=95  Identities=15%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.++++|.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .++
T Consensus        97 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  173 (232)
T 1zrn_A           97 FSEVPDSLRELKRRGLKLAILSNGSPQSIDA---VVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  173 (232)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHH---HHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            467888899888899985 789876543321   12233455566664 667778899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+. +|+++|+++|+.+++++..
T Consensus       174 iGD~~-~Di~~a~~aG~~~~~~~~~  197 (232)
T 1zrn_A          174 VASNA-WDATGARYFGFPTCWINRT  197 (232)
T ss_dssp             EESCH-HHHHHHHHHTCCEEEECTT
T ss_pred             EeCCH-HHHHHHHHcCCEEEEEcCC
Confidence            99996 8999999999999998653

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.88  E-value=3.8e-10  Score=99.27  Aligned_cols=93  Identities=6%  Similarity=0.043  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH--HHHHH----------hcCcc---cccCCCCHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEK----------LGGEV---RWMGKPDKLWATL  234 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~--~~~e~----------~g~e~---~~~GKP~p~if~~  234 (332)
                      ++++.++++.|+++|.++ |+||.........   +...++.  .+|+.          .+.+.   ...+||+|.+|+.
T Consensus        88 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~---l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           88 TPGIRELVSRLQERNVQVFLISGGFRSIVEHV---ASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH---HHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCChHHHHHHH---HHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            467899999998999985 7888655432211   1111111  11211          01111   1124677889999


Q ss_pred             HHHHhCC--eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          235 FTMILRV--QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       235 Al~~lg~--~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +++++|+  .+||||++ +|+++|+++|+ ++++..
T Consensus       165 ~~~~~~~~~~~~vGDs~-~Di~~a~~ag~-~i~~~~  198 (225)
T 1nnl_A          165 LKEKFHFKKIIMIGDGA-TDMEACPPADA-FIGFGG  198 (225)
T ss_dssp             HHHHHCCSCEEEEESSH-HHHTTTTTSSE-EEEECS
T ss_pred             HHHHcCCCcEEEEeCcH-HhHHHHHhCCe-EEEecC
Confidence            9999986  79999996 89999999999 898864

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.87  E-value=2.5e-08  Score=88.93  Aligned_cols=59  Identities=12%  Similarity=0.151  Sum_probs=46.1

Q ss_pred             CccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .++.|+||+||||+++.. +.+...++|+.++++|++++++|+.+.  ......++.+|++.
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~TGR~~--~~~~~~~~~l~~~~   61 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTV--QFAEAASILIGTSG   61 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSCH--HHHHHHHHHHTCCS
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCh--hHHHHHHHHcCCCC
Confidence            378999999999999775 457788999999999999999997543  33444456667653

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=98.86  E-value=6.8e-10  Score=107.71  Aligned_cols=96  Identities=11%  Similarity=0.071  Sum_probs=73.2

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHH--Hh-cCcccc-----------cCCCCHHHHH
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE--KL-GGEVRW-----------MGKPDKLWAT  233 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e--~~-g~e~~~-----------~GKP~p~if~  233 (332)
                      -.|+++.++++.|+++|+++ |+||........   .+...++..+|+  .+ +++...           .+||+|.+|.
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~---~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~  291 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVV---PFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHH---HHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence            45899999999999999996 889987643321   122223555565  33 333222           4999999999


Q ss_pred             HHHHHhC--------------C----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          234 LFTMILR--------------V----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       234 ~Al~~lg--------------~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      .+++++|              +    .+||||++ .||++|+++||++|++..
T Consensus       292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~  343 (384)
T 1qyi_A          292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLT  343 (384)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESC
T ss_pred             HHHHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECC
Confidence            9999988              5    69999996 899999999999999965

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.83  E-value=1.9e-09  Score=95.47  Aligned_cols=95  Identities=16%  Similarity=0.126  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.++++|.++ ++||........   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    .++
T Consensus       107 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  183 (240)
T 2no4_A          107 YPDAAETLEKLKSAGYIVAILSNGNDEMLQA---ALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF  183 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            477888999888899985 788876543221   12222355556553 556677899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+. .|+++|+++|+.+++++.-
T Consensus       184 iGD~~-~Di~~a~~aG~~~~~v~~~  207 (240)
T 2no4_A          184 VSSNA-WDLGGAGKFGFNTVRINRQ  207 (240)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECTT
T ss_pred             EeCCH-HHHHHHHHCCCEEEEECCC
Confidence            99995 8999999999999999754

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.80  E-value=4.9e-08  Score=88.23  Aligned_cols=58  Identities=24%  Similarity=0.280  Sum_probs=44.5

Q ss_pred             CccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      .+++++||+||||+++.. +-+...++|++++++|++++++|..+...  +...++.+|+.
T Consensus         4 M~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~--~~~~~~~~~~~   62 (274)
T 3fzq_A            4 LYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGT--IQDDVLSLGVD   62 (274)
T ss_dssp             CCCEEEECSBTTTBBTTTBCCHHHHHHHHHHHHTTCEEEEECSSCTTT--SCHHHHTTCCS
T ss_pred             cceEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEeCCChHH--HHHHHHHcCCC
Confidence            489999999999999875 45666789999999999999999865322  22345556654

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.80  E-value=1.9e-09  Score=95.78  Aligned_cols=91  Identities=9%  Similarity=0.058  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh--cCc--ccccCCCCHHHHHHHHHHhCCeEEEe
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGE--VRWMGKPDKLWATLFTMILRVQMQLE  246 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g~e--~~~~GKP~p~if~~Al~~lg~~lmIG  246 (332)
                      ++..++++.|+++|.++ |+||........   .+..  +..+|+.+  +..  ....+||+|.+|..+++++|+.+|||
T Consensus        91 ~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~---~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~~l~VG  165 (211)
T 2b82_A           91 EVARQLIDMHVRRGDAIFFVTGRSPTKTET---VSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIRIFYG  165 (211)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECSCCCSSCC---HHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTEEEEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCcHHHHHH---HHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence            67788898888889985 889976542221   1221  44555543  222  23458999999999999999999999


Q ss_pred             CChhhHHHHHHHcCCcEEEEec
Q 019991          247 SSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       247 Ds~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |++ .||++|+++||+++++..
T Consensus       166 Ds~-~Di~aA~~aG~~~i~v~~  186 (211)
T 2b82_A          166 DSD-NDITAARDVGARGIRILR  186 (211)
T ss_dssp             SSH-HHHHHHHHTTCEEEECCC
T ss_pred             CCH-HHHHHHHHCCCeEEEEec
Confidence            997 899999999999999965

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.78  E-value=2.6e-08  Score=90.25  Aligned_cols=46  Identities=4%  Similarity=-0.037  Sum_probs=39.2

Q ss_pred             cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          222 RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       222 ~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ...|+|.+..++.+++++|+    .++|||+ .+|+.+++++|+..++-|.
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~ag~~v~~~n~  231 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAAIGVAMGQA  231 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEEEECTTS
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCceEEecCc
Confidence            55789999999999999998    6999999 5899999999995554343

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.77  E-value=1.1e-07  Score=88.08  Aligned_cols=45  Identities=22%  Similarity=0.228  Sum_probs=38.6

Q ss_pred             cCccEEEEeccceeecCCccCcC--HHHHHHHHHHCCCeEEEEeCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPG--AISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipG--a~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |.+++|+||+||||+++...++.  ..++|++++++|++++++|..+
T Consensus        35 M~iKli~fDlDGTLld~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~   81 (304)
T 3l7y_A           35 MSVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNP   81 (304)
T ss_dssp             -CCSEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             eeeEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            46899999999999999876655  4699999999999999999743

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.77  E-value=1.3e-09  Score=94.50  Aligned_cols=92  Identities=9%  Similarity=0.022  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHH-Hh-cC-cccccC--CCCHHHHHHHHHHhCC---
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE-KL-GG-EVRWMG--KPDKLWATLFTMILRV---  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e-~~-g~-e~~~~G--KP~p~if~~Al~~lg~---  241 (332)
                      ++++.++++.|.++ .++ |+||........   .+...++..+|. .+ .. +....+  ||+|.++..++++++.   
T Consensus        71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~  146 (206)
T 1rku_A           71 LEGAVEFVDWLRER-FQVVILSDTFYEFSQP---LMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CTTHHHHHHHHHTT-SEEEEEEEEEHHHHHH---HHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             CccHHHHHHHHHhc-CcEEEEECChHHHHHH---HHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence            57788899888777 775 788865433221   111112333332 21 21 211112  5888999999999876   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                       .+||||+. +|+.+|+++|+..+ ++.
T Consensus       147 ~~~~iGD~~-~Di~~a~~aG~~~~-~~~  172 (206)
T 1rku_A          147 RVIAAGDSY-NDTTMLSEAHAGIL-FHA  172 (206)
T ss_dssp             EEEEEECSS-TTHHHHHHSSEEEE-ESC
T ss_pred             EEEEEeCCh-hhHHHHHhcCccEE-ECC
Confidence             69999995 89999999999865 443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.75  E-value=8.9e-09  Score=90.49  Aligned_cols=112  Identities=17%  Similarity=0.157  Sum_probs=78.8

Q ss_pred             ccHHHHhhhcCccEEEEeccceeecCCccC----cCHHHH-------HHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCC
Q 019991           19 NGLRHIAETRRFKAWLLDQFGVLHDGKKPY----PGAIST-------LEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (332)
Q Consensus        19 ~~~~~~~~~~~~~~vlfDlDGvL~~g~~~i----pGa~e~-------L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl   87 (332)
                      +++.+...  .+++++||+||||+++...+    +++.++       |+.|+++|++++++||+++.  .....++++|+
T Consensus        16 ~~~~~~~~--~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~--~~~~~l~~lgi   91 (195)
T 3n07_A           16 PSLLEIAK--QIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQ--IVENRMKALGI   91 (195)
T ss_dssp             HHHHHHHH--TCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHHHTTC
T ss_pred             HHHHHHHh--CCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHH--HHHHHHHHcCC
Confidence            35666666  79999999999999855332    345556       99999999999999998653  34567889999


Q ss_pred             CccccccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCcc
Q 019991           88 DPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus        88 ~~~~f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                      ... |..+..........+++.+.+     ..+++.+|.+..+...++..|+.
T Consensus        92 ~~~-~~~~k~k~~~~~~~~~~~~~~-----~~~~~~vGD~~nDi~~~~~ag~~  138 (195)
T 3n07_A           92 SLI-YQGQDDKVQAYYDICQKLAIA-----PEQTGYIGDDLIDWPVMEKVALR  138 (195)
T ss_dssp             CEE-ECSCSSHHHHHHHHHHHHCCC-----GGGEEEEESSGGGHHHHTTSSEE
T ss_pred             cEE-eeCCCCcHHHHHHHHHHhCCC-----HHHEEEEcCCHHHHHHHHHCCCE
Confidence            877 566666666666666655432     24677778665444455555553

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.74  E-value=3.6e-09  Score=99.85  Aligned_cols=91  Identities=10%  Similarity=-0.032  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-c----------CcccccCCCCHHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-G----------GEVRWMGKPDKLWATLFTMI  238 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g----------~e~~~~GKP~p~if~~Al~~  238 (332)
                      ++++.++++.|+++|.++ |+||.........   +...++..+|... .          ..+...+||+|.+|..++++
T Consensus       181 ~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~---l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          181 SPGLLTILPVIKAKGFKTAIISGGLDIFTQRL---KARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH---HHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHhCCCEEEEEeCccHHHHHHH---HHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            367889999998999985 7888554332211   1111111122210 0          12234569999999999999


Q ss_pred             hCC----eEEEeCChhhHHHHHHHcCCcEEE
Q 019991          239 LRV----QMQLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       239 lg~----~lmIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      +|+    .+||||+. +|+.+|+++|+..+|
T Consensus       258 lgv~~~~~i~VGDs~-~Di~aa~~AG~~va~  287 (317)
T 4eze_A          258 LNIATENIIACGDGA-NDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             cCCCcceEEEEeCCH-HHHHHHHHCCCeEEe
Confidence            998    69999995 799999999998877

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.73  E-value=6.8e-09  Score=95.30  Aligned_cols=60  Identities=27%  Similarity=0.383  Sum_probs=54.2

Q ss_pred             CccEEEEeccceeecC--------------------------CccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHH
Q 019991           29 RFKAWLLDQFGVLHDG--------------------------KKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDK   81 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g--------------------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~   81 (332)
                      .+++|+||+||||+++                          ..++||+.++|+.|+++|++++++||++. ....+.+.
T Consensus        58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~  137 (258)
T 2i33_A           58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKN  137 (258)
T ss_dssp             SEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHH
T ss_pred             CCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH
Confidence            6899999999999998                          68999999999999999999999999874 34567788


Q ss_pred             HHhCCCC
Q 019991           82 LKSLGFD   88 (332)
Q Consensus        82 L~~lGl~   88 (332)
                      |+.+|+.
T Consensus       138 L~~~Gl~  144 (258)
T 2i33_A          138 LERVGAP  144 (258)
T ss_dssp             HHHHTCS
T ss_pred             HHHcCCC
Confidence            9999998

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.72  E-value=6e-09  Score=93.44  Aligned_cols=92  Identities=16%  Similarity=0.190  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.++++.++  |.++ ++||.+......   .+...++..+|+.+ +.+....+||+|.+|+.+++++|+    .++
T Consensus        95 ~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           95 YPDAAQCLAELA--PLKRAILSNGAPDMLQA---LVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CTTHHHHHHHHT--TSEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CccHHHHHHHHc--CCCEEEEeCcCHHHHHH---HHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            477888898865  8875 889976654322   12222355556654 566677899999999999999998    599


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. +||++|+++|+.+++++.
T Consensus       170 vGD~~-~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          170 VSSNG-FDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECC
T ss_pred             EeCCh-hhHHHHHHCCCEEEEECC
Confidence            99995 899999999999999987

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.71  E-value=2.9e-07  Score=84.40  Aligned_cols=59  Identities=20%  Similarity=0.182  Sum_probs=46.0

Q ss_pred             cCccEEEEeccceeecCCc--cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK--PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~--~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++++.++||+||||++...  +-+...++|++++++|++++++|..+  ...+...++.+|..
T Consensus        19 ~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~--~~~~~~~~~~l~~~   79 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQ--FSSEFKLFAPIKHK   79 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHTGGGGGG
T ss_pred             cCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHcCCC
Confidence            4799999999999998765  66788999999999999999999744  33344445555543

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.70  E-value=2.8e-07  Score=83.29  Aligned_cols=45  Identities=27%  Similarity=0.362  Sum_probs=39.5

Q ss_pred             CccEEEEeccceeec-CC-ccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           29 RFKAWLLDQFGVLHD-GK-KPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~-g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      .++.++||+||||++ +. .+-+...++|++++++|++++++|..+.
T Consensus        11 miKli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~   57 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAA   57 (268)
T ss_dssp             CCCEEEECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             ceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence            589999999999998 43 5677888999999999999999998653

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.68  E-value=5.5e-09  Score=90.16  Aligned_cols=91  Identities=13%  Similarity=0.108  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEEeC
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQLES  247 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmIGD  247 (332)
                      +++.+ ++.|.++ .++ |+||.+......   .+...++..+|+.+ +++....+||+|.+|..+++++|.  .+||||
T Consensus        77 ~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~vGD  151 (201)
T 2w43_A           77 EDTKY-LKEISEI-AEVYALSNGSINEVKQ---HLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIGAKEAFLVSS  151 (201)
T ss_dssp             GGGGG-HHHHHHH-SEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCSCCEEEES
T ss_pred             CChHH-HHHHHhC-CeEEEEeCcCHHHHHH---HHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcCCCcEEEEeC
Confidence            55667 7777777 875 789876543221   12222345555553 556677899999999999999983  599999


Q ss_pred             ChhhHHHHHHHcCCcEEEEec
Q 019991          248 SPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       248 s~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ++ .|+++|+++|+.+++++.
T Consensus       152 ~~-~Di~~a~~aG~~~~~~~~  171 (201)
T 2w43_A          152 NA-FDVIGAKNAGMRSIFVNR  171 (201)
T ss_dssp             CH-HHHHHHHHTTCEEEEECS
T ss_pred             CH-HHhHHHHHCCCEEEEECC
Confidence            96 599999999999999876

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.67  E-value=1.2e-09  Score=94.15  Aligned_cols=92  Identities=2%  Similarity=-0.107  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChh--HHHHHH--h-cCcc----cccCCCCHHHHHHHHHH-h
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL--ASKFEK--L-GGEV----RWMGKPDKLWATLFTMI-L  239 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i--~~~~e~--~-g~e~----~~~GKP~p~if~~Al~~-l  239 (332)
                      ++++.++++.+.++|.++ ++||.........   +...++  ...+..  . ..+.    ....||+|..+..++.+ +
T Consensus        84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  160 (219)
T 3kd3_A           84 TDGIKELVQDLKNKGFEIWIFSGGLSESIQPF---ADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK  160 (219)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH---HHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred             ChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHH---HHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence            366788888888889885 7787544322110   000001  111110  0 1111    24578888777776655 4


Q ss_pred             CC----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          240 RV----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       240 g~----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      |+    .+||||+. +|+++| ++|+.++++.
T Consensus       161 ~~~~~~~~~vGD~~-~Di~~~-~~G~~~~~v~  190 (219)
T 3kd3_A          161 GLIDGEVIAIGDGY-TDYQLY-EKGYATKFIA  190 (219)
T ss_dssp             GGCCSEEEEEESSH-HHHHHH-HHTSCSEEEE
T ss_pred             CCCCCCEEEEECCH-hHHHHH-hCCCCcEEEe
Confidence            76    69999996 699998 6899988874

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.67  E-value=5.1e-08  Score=85.76  Aligned_cols=92  Identities=3%  Similarity=-0.119  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH--------h-cC--cccccCCCCHHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--------L-GG--EVRWMGKPDKLWATLFTMI  238 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~--------~-g~--e~~~~GKP~p~if~~Al~~  238 (332)
                      ++++.++++.|+++|.++ |+||.........   +..-++...+..        . |.  .+...|||.+..+..++++
T Consensus        94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPI---ARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            588999999999999985 7888765432211   110011111110        0 11  1334578888999999999


Q ss_pred             hC---C----eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          239 LR---V----QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       239 lg---~----~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      +|   +    .++|||+. +|+.+|+++|+..+..
T Consensus       171 ~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSV-NDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             TTCCGGGSSEEEEEECCG-GGHHHHHHSSEEEEES
T ss_pred             cCCCcCchhheEEEeCCH-hhHHHHHhCCCeEEEC
Confidence            98   5    69999995 8999999999887653

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.65  E-value=1.2e-06  Score=80.29  Aligned_cols=59  Identities=17%  Similarity=0.202  Sum_probs=47.4

Q ss_pred             CccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .++.++||+||||++... +-+...++|++++++|++++++|..+.  ..+...++.+|+..
T Consensus         4 m~kli~~DlDGTLl~~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~--~~~~~~~~~l~l~~   63 (282)
T 1rkq_A            4 AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPY--AGVHNYLKELHMEQ   63 (282)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCG--GGTHHHHHHTTCCS
T ss_pred             cceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHHhCCCC
Confidence            489999999999998764 557788999999999999999997653  23445567788764

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.65  E-value=2.7e-08  Score=86.41  Aligned_cols=109  Identities=20%  Similarity=0.204  Sum_probs=74.8

Q ss_pred             HHHHhhhcCccEEEEeccceeecCCccCcCHH-----------HHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           21 LRHIAETRRFKAWLLDQFGVLHDGKKPYPGAI-----------STLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        21 ~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~-----------e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      +.+...  ++++++||+||||+++...+....           .+|+.|+++|++++++||+++.  .....++++|+..
T Consensus        12 ~~~~~~--~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~--~~~~~~~~lgl~~   87 (189)
T 3mn1_A           12 LMQRGK--AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRKTA--IVERRAKSLGIEH   87 (189)
T ss_dssp             HHHHHH--TCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHHHHTCSE
T ss_pred             HHHHHH--hCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcChH--HHHHHHHHcCCHH
Confidence            444455  799999999999999864433322           3899999999999999997653  3456778899987


Q ss_pred             cccccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991           90 SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus        90 ~~f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      . |..+....+.....+++.+.+     ..+++.+|.+..+...++..|+
T Consensus        88 ~-f~~~~~K~~~~~~~~~~~g~~-----~~~~~~vGD~~nDi~~~~~ag~  131 (189)
T 3mn1_A           88 L-FQGREDKLVVLDKLLAELQLG-----YEQVAYLGDDLPDLPVIRRVGL  131 (189)
T ss_dssp             E-ECSCSCHHHHHHHHHHHHTCC-----GGGEEEEECSGGGHHHHHHSSE
T ss_pred             H-hcCcCChHHHHHHHHHHcCCC-----hhHEEEECCCHHHHHHHHHCCC
Confidence            7 566655555555555554321     2467777876554445555654

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.64  E-value=1.9e-08  Score=93.18  Aligned_cols=97  Identities=8%  Similarity=-0.014  Sum_probs=69.3

Q ss_pred             cccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC--------ChhHHHHHHh-cCcccccCCCCHHHHHHHH
Q 019991          167 RPMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP--------GTLASKFEKL-GGEVRWMGKPDKLWATLFT  236 (332)
Q Consensus       167 ~~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~--------G~i~~~~e~~-g~e~~~~GKP~p~if~~Al  236 (332)
                      ....|+++.++++.|+++|+++ |+||+.......-...+..        .++  .|+.+ +++.. .+||+|.++..++
T Consensus       186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~  262 (301)
T 1ltq_A          186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIF  262 (301)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHH
T ss_pred             ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHH
Confidence            3445899999999999999996 8899876433211001111        122  24443 33332 4799999999999


Q ss_pred             HHhCC-----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          237 MILRV-----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       237 ~~lg~-----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ++++.     .+||||+ ..||++|+++|++++.+.
T Consensus       263 ~~~~~~~~~~~~~vgD~-~~di~~a~~aG~~~~~v~  297 (301)
T 1ltq_A          263 WKHIAPHFDVKLAIDDR-TQVVEMWRRIGVECWQVA  297 (301)
T ss_dssp             HHHTTTTCEEEEEEECC-HHHHHHHHHTTCCEEECS
T ss_pred             HHHhccccceEEEeCCc-HHHHHHHHHcCCeEEEec
Confidence            99864     4799999 589999999999999875

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.63  E-value=6.4e-07  Score=81.59  Aligned_cols=45  Identities=24%  Similarity=0.329  Sum_probs=38.2

Q ss_pred             cCccEEEEeccceeecCCccCcCH--HHHHHHHHHCCCeEEEEeCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPGA--ISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipGa--~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |+++.++||+||||.+....++..  .++|++|+++|++++++|..+
T Consensus         1 m~~kli~~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~   47 (271)
T 1rlm_A            1 MAVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQ   47 (271)
T ss_dssp             -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred             CCccEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            358899999999999987766543  799999999999999999754

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.61  E-value=1.8e-06  Score=77.59  Aligned_cols=59  Identities=22%  Similarity=0.201  Sum_probs=43.3

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      |++++|+||+||||+++.. +-+...++|++++++|++++++|..+..  .....++.+|+.
T Consensus         1 M~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~--~~~~~~~~l~~~   60 (258)
T 2pq0_A            1 MGRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPF--MFEHVRKQLGID   60 (258)
T ss_dssp             -CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGG--GSHHHHHHHTCC
T ss_pred             CCceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEECCCChH--HHHHHHHhcCCC
Confidence            3578999999999999775 4456788999999999999999975532  222334455543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.60  E-value=1.6e-06  Score=79.60  Aligned_cols=59  Identities=19%  Similarity=0.234  Sum_probs=45.6

Q ss_pred             CccEEEEeccceeecCCcc-CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~-ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .+++|+||+||||+++... .+...++++++++.|++++++|..+  ...+...++.+|+..
T Consensus         3 mikli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~--~~~~~~~~~~l~~~~   62 (288)
T 1nrw_A            3 AMKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRA--HFDVMSIFEPLGIKT   62 (288)
T ss_dssp             -CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHGGGTCCC
T ss_pred             ceEEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHcCCCC
Confidence            3789999999999998754 5667789999999999999999644  334455566777653

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.60  E-value=6.7e-07  Score=81.95  Aligned_cols=60  Identities=20%  Similarity=0.192  Sum_probs=46.5

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++++.++||+||||+++.. +-+...++|++++++|++++++|..+..  .+...++.+|++.
T Consensus        19 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~--~~~~~~~~l~~~~   79 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYI--DVGQIRDNLGIRS   79 (285)
T ss_dssp             --CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEECSSCGG--GGHHHHHHHCSCC
T ss_pred             CcceEEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHhcCCCc
Confidence            4799999999999999765 5557789999999999999999976532  2345566777764

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.53  E-value=2e-07  Score=90.54  Aligned_cols=91  Identities=11%  Similarity=-0.036  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH--------h-c--CcccccCCCCHHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--------L-G--GEVRWMGKPDKLWATLFTMI  238 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~--------~-g--~e~~~~GKP~p~if~~Al~~  238 (332)
                      ++++.++++.|+++|.++ |+||.........   ....++..+|..        . |  ..+...+||+|.+|+.++++
T Consensus       258 ~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~---~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~  334 (415)
T 3p96_A          258 MPGARTTLRTLRRLGYACGVVSGGFRRIIEPL---AEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQR  334 (415)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH---HHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHH---HHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHH
Confidence            367888999888999985 7788544322211   111111111110        0 1  12344589999999999999


Q ss_pred             hCC----eEEEeCChhhHHHHHHHcCCcEEE
Q 019991          239 LRV----QMQLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       239 lg~----~lmIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      +|+    ++||||+. +|+.+|+++|+..++
T Consensus       335 ~gi~~~~~i~vGD~~-~Di~~a~~aG~~va~  364 (415)
T 3p96_A          335 AGVPMAQTVAVGDGA-NDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             cCcChhhEEEEECCH-HHHHHHHHCCCeEEE
Confidence            998    69999996 899999999998887

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.51  E-value=1.6e-07  Score=82.99  Aligned_cols=50  Identities=26%  Similarity=0.434  Sum_probs=39.8

Q ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        48 ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      +||+.++++.|++.|++++++||++.  ......++++|+... |+.++++.+
T Consensus       107 ~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~  156 (240)
T 2no4_A          107 YPDAAETLEKLKSAGYIVAILSNGND--EMLQAALKASKLDRV-LDSCLSADD  156 (240)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHTTCGGG-CSEEEEGGG
T ss_pred             CCCHHHHHHHHHHCCCEEEEEcCCCH--HHHHHHHHhcCcHHH-cCEEEEccc
Confidence            48999999999999999999999753  234567788999876 577776543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.48  E-value=8.3e-08  Score=82.37  Aligned_cols=102  Identities=15%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             CccEEEEeccceeecCCccC----cCHHH-------HHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccc
Q 019991           29 RFKAWLLDQFGVLHDGKKPY----PGAIS-------TLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~i----pGa~e-------~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iit   97 (332)
                      ++++++||+||||.++...+    .....       +|++|+++|++++++||+++.  .....++++|+. . +.....
T Consensus        11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~--~~~~~~~~lgi~-~-~~~~~~   86 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKSGLTMLILSTEQNP--VVAARARKLKIP-V-LHGIDR   86 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHHTCC-E-EESCSC
T ss_pred             cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHCCCeEEEEECcChH--HHHHHHHHcCCe-e-EeCCCC
Confidence            58999999999999954432    11122       499999999999999997653  244667888998 4 566666


Q ss_pred             cHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991           98 SGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus        98 s~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      ..+.....+++.+.+     ..+++.+|.+..+...++..|+
T Consensus        87 k~~~l~~~~~~~~~~-----~~~~~~vGD~~nD~~~~~~ag~  123 (176)
T 3mmz_A           87 KDLALKQWCEEQGIA-----PERVLYVGNDVNDLPCFALVGW  123 (176)
T ss_dssp             HHHHHHHHHHHHTCC-----GGGEEEEECSGGGHHHHHHSSE
T ss_pred             hHHHHHHHHHHcCCC-----HHHEEEEcCCHHHHHHHHHCCC
Confidence            666666666655421     2467777876554445555554

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.46  E-value=1.9e-07  Score=82.95  Aligned_cols=110  Identities=15%  Similarity=0.132  Sum_probs=74.5

Q ss_pred             HHHHhhhcCccEEEEeccceeecCCccCcCH-----------HHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           21 LRHIAETRRFKAWLLDQFGVLHDGKKPYPGA-----------ISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        21 ~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa-----------~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      +.+-+.  .+++++||+||||.++...+...           ..+|+.|+++|++++++||++..  .....++++|+..
T Consensus        42 l~~~~~--~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~G~~l~I~T~~~~~--~~~~~l~~lgi~~  117 (211)
T 3ij5_A           42 VIQRAA--NIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDVAIITGRRAK--LLEDRANTLGITH  117 (211)
T ss_dssp             HHHHHT--TCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHHHHTCCE
T ss_pred             HHHHHh--CCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHCCCEEEEEeCCCHH--HHHHHHHHcCCch
Confidence            444444  79999999999999875332111           12789999999999999997653  3456778899987


Q ss_pred             cccccccccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCcc
Q 019991           90 SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus        90 ~~f~~Iits~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                      . |..+....+.....+++.+.+     ...++.+|.+..+...++..|+.
T Consensus       118 ~-f~~~k~K~~~l~~~~~~lg~~-----~~~~~~vGDs~nDi~~~~~ag~~  162 (211)
T 3ij5_A          118 L-YQGQSDKLVAYHELLATLQCQ-----PEQVAYIGDDLIDWPVMAQVGLS  162 (211)
T ss_dssp             E-ECSCSSHHHHHHHHHHHHTCC-----GGGEEEEECSGGGHHHHTTSSEE
T ss_pred             h-hcccCChHHHHHHHHHHcCcC-----cceEEEEcCCHHHHHHHHHCCCE
Confidence            6 566655556665556554421     24677778765544455666653

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.38  E-value=4.2e-07  Score=76.07  Aligned_cols=63  Identities=16%  Similarity=0.217  Sum_probs=51.4

Q ss_pred             cCccEEEEeccceeecCC-----ccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCcc
Q 019991           28 RRFKAWLLDQFGVLHDGK-----KPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~-----~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~   90 (332)
                      |+++.++||+||||++..     .+.|++.++|+.|+++|+.++++|+.+ +......+.+++.|++..
T Consensus         1 m~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~   69 (142)
T 2obb_A            1 SNAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFY   69 (142)
T ss_dssp             -CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCS
T ss_pred             CCCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeE
Confidence            357899999999999965     357999999999999999999999976 334556677888888643

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.38  E-value=3.7e-07  Score=79.93  Aligned_cols=51  Identities=20%  Similarity=0.350  Sum_probs=39.9

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ++||+.++|+.|++.|++++++||++.  ......++++|+... |+.++++.+
T Consensus        96 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~  146 (232)
T 1zrn_A           96 PFSEVPDSLRELKRRGLKLAILSNGSP--QSIDAVVSHAGLRDG-FDHLLSVDP  146 (232)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHTTCGGG-CSEEEESGG
T ss_pred             CCccHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHhcChHhh-hheEEEecc
Confidence            358999999999999999999999754  234567888998776 577766543

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.37  E-value=1.2e-05  Score=72.93  Aligned_cols=57  Identities=14%  Similarity=0.130  Sum_probs=44.4

Q ss_pred             ccEEEEeccceeecCCcc-CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           30 FKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~-ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.++||+||||++.... -+...++|++ +++|++++++|..+  ...+...++.+|+..
T Consensus         2 ikli~~DlDGTLl~~~~~i~~~~~~al~~-~~~Gi~v~iaTGR~--~~~~~~~~~~l~~~~   59 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDNLEISEKDRRNIEK-LSRKCYVVFASGRM--LVSTLNVEKKYFKRT   59 (268)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHHHHH-HTTTSEEEEECSSC--HHHHHHHHHHHSSSC
T ss_pred             ccEEEEeCCCcCCCCCCccCHHHHHHHHH-HhCCCEEEEECCCC--hHHHHHHHHHhCCCC
Confidence            689999999999987654 4667889999 88999999999754  334455566777754

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.33  E-value=6.6e-09  Score=90.43  Aligned_cols=78  Identities=9%  Similarity=0.006  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHHHhC-CCcE-EEecCCccceeccceecCCChhHH-HHHHhcCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLAS-KFEKLGGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~-g~~l-IaTN~D~~~~~~~~~~l~~G~i~~-~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .|+++.++++.|+++ |.++ |+||........   .+...++.. +|.                 ..+++++|+    .
T Consensus        76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~---~l~~~~l~~~~f~-----------------~~~~~~l~~~~~~~  135 (197)
T 1q92_A           76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYC---PYEKYAWVEKYFG-----------------PDFLEQIVLTRDKT  135 (197)
T ss_dssp             BCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSH---HHHHHHHHHHHHC-----------------GGGGGGEEECSCST
T ss_pred             cCcCHHHHHHHHHhcCCCeEEEEeCCccchHHH---HHHHhchHHHhch-----------------HHHHHHhccCCccE
Confidence            357889999999888 8885 889976653321   122223444 443                 344555554    4


Q ss_pred             EEEeCChhhH----HHHHH-HcCCcEEEEec
Q 019991          243 MQLESSPYSL----LEGSM-QLNLDLTVMEK  268 (332)
Q Consensus       243 lmIGDs~~~D----I~gA~-~aG~~ti~~~~  268 (332)
                      +||||++ .|    +++|+ ++||++|+++.
T Consensus       136 ~~vgDs~-~dD~~~~~~a~~~aG~~~i~~~~  165 (197)
T 1q92_A          136 VVSADLL-IDDRPDITGAEPTPSWEHVLFTA  165 (197)
T ss_dssp             TSCCSEE-EESCSCCCCSCSSCSSEEEEECC
T ss_pred             EEECccc-ccCCchhhhcccCCCceEEEecC
Confidence            7999996 56    99999 99999999964

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.32  E-value=1.1e-06  Score=71.47  Aligned_cols=44  Identities=20%  Similarity=0.309  Sum_probs=38.9

Q ss_pred             ccEEEEeccceeecCCc-------cCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           30 FKAWLLDQFGVLHDGKK-------PYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-------~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      +++++||+||||+++..       +.|++.++++.|+++|++++++|+.+.
T Consensus         1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            46899999999998763       668899999999999999999999764

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=97.61  E-value=9.8e-08  Score=87.24  Aligned_cols=85  Identities=7%  Similarity=0.051  Sum_probs=59.9

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      ..+++..++++.|+++|+++ ++||.+......   .....++..+|..+.          |..+..++++++.    .+
T Consensus       136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~---~~~~~gl~~~f~~~~----------p~~k~~~~~~l~~~~~~~~  202 (263)
T 2yj3_A          136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKE---LSKELNIQEYYSNLS----------PEDKVRIIEKLKQNGNKVL  202 (263)
Confidence            35788999999988889885 788865543322   233334555554321          4456778888776    58


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEe
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||||+ .+|+.+|+++|+...|-+
T Consensus       203 ~VGD~-~~D~~aa~~Agv~va~g~  225 (263)
T 2yj3_A          203 MIGDG-VNDAAALALADVSVAMGN  225 (263)
Confidence            99999 589999999998877754

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.27  E-value=1.1e-05  Score=74.26  Aligned_cols=80  Identities=9%  Similarity=0.056  Sum_probs=53.0

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc---cccCCCCHHHHHHHHHHhCC---
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV---RWMGKPDKLWATLFTMILRV---  241 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~---~~~GKP~p~if~~Al~~lg~---  241 (332)
                      ..++++.++++.|+++|+++ |+||.......            ..++..|-..   ...+++.    ..++++++.   
T Consensus       163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~------------~~l~~~gl~~~f~~i~~~~K----~~~~~~l~~~~~  226 (287)
T 3a1c_A          163 TLKESAKPAVQELKRMGIKVGMITGDNWRSAE------------AISRELNLDLVIAEVLPHQK----SEEVKKLQAKEV  226 (287)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH------------HHHHHHTCSEEECSCCTTCH----HHHHHHHTTTCC
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCCHHHHH------------HHHHHhCCceeeeecChHHH----HHHHHHHhcCCe
Confidence            34688999999999999985 78886554221            1122222111   1122222    567777764   


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEE
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      ++||||+. +|+.+|+++|+...|
T Consensus       227 ~~~vGDs~-~Di~~a~~ag~~v~~  249 (287)
T 3a1c_A          227 VAFVGDGI-NDAPALAQADLGIAV  249 (287)
T ss_dssp             EEEEECTT-TCHHHHHHSSEEEEE
T ss_pred             EEEEECCH-HHHHHHHHCCeeEEe
Confidence            69999996 899999999997444

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.26  E-value=2.5e-06  Score=76.71  Aligned_cols=82  Identities=15%  Similarity=0.160  Sum_probs=56.7

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH-HHhhcCChhhhhcCCeEEEe
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ-YLLRRDDAWFAALGRSCIHM  124 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~-~L~~~~~~~~~~~G~~v~~~  124 (332)
                      .++||+.++|+.|++.|++++++||+++.  .....++.+|+... |+.+++++..... .+.+.         -.++.+
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~--~~~~~~~~~gl~~~-f~~~~~~~k~~~~k~~~~~---------~~~~~v  211 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRF--VAKWVAEELGLDDY-FAEVLPHEKAEKVKEVQQK---------YVTAMV  211 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHTCSEE-ECSCCGGGHHHHHHHHHTT---------SCEEEE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHH--HHHHHHHHcCChhH-hHhcCHHHHHHHHHHHHhc---------CCEEEE
Confidence            46799999999999999999999997643  34566788999887 6788777655432 12222         145667


Q ss_pred             ecCcccchhhhcCCc
Q 019991          125 TWSDRGAISLEGLGL  139 (332)
Q Consensus       125 g~~~~~~~~l~~~g~  139 (332)
                      |.+..+...++..|+
T Consensus       212 GD~~nDi~~~~~Ag~  226 (280)
T 3skx_A          212 GDGVNDAPALAQADV  226 (280)
T ss_dssp             ECTTTTHHHHHHSSE
T ss_pred             eCCchhHHHHHhCCc
Confidence            765544445555554

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.24  E-value=2.6e-06  Score=72.98  Aligned_cols=101  Identities=14%  Similarity=0.134  Sum_probs=66.5

Q ss_pred             CccEEEEeccceeecCCccCcCH-----------HHHHHHHHHCCCeEEEEeCCCCChhHHHHHHH--hCCCCccccccc
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGA-----------ISTLEMLATTGAKMVVISNSSRRASTTIDKLK--SLGFDPSLFAGA   95 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa-----------~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~--~lGl~~~~f~~I   95 (332)
                      .++.++||+||||+++...+...           ...|+.|+++|++++++||+ ...   ...++  .+|+. . |...
T Consensus         8 ~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~Gi~~~I~Tg~-~~~---~~~l~~l~lgi~-~-~~g~   81 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISER-ACS---KQTLSALKLDCK-T-EVSV   81 (168)
T ss_dssp             CCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHTTCEEEEECSS-CCC---HHHHHTTCCCCC-E-ECSC
T ss_pred             cCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHCCCEEEEEeCc-HHH---HHHHHHhCCCcE-E-EECC
Confidence            79999999999999987555332           24799999999999999998 433   24466  66776 4 4443


Q ss_pred             cccHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCcc
Q 019991           96 ITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus        96 its~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                      -...+.....+++.+.+     ...++.+|.+.-+...++..|+.
T Consensus        82 ~~K~~~l~~~~~~~gi~-----~~~~~~vGD~~nDi~~~~~ag~~  121 (168)
T 3ewi_A           82 SDKLATVDEWRKEMGLC-----WKEVAYLGNEVSDEECLKRVGLS  121 (168)
T ss_dssp             SCHHHHHHHHHHHTTCC-----GGGEEEECCSGGGHHHHHHSSEE
T ss_pred             CChHHHHHHHHHHcCcC-----hHHEEEEeCCHhHHHHHHHCCCE
Confidence            34445555555554322     14566677665444455666653

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.20  E-value=1.1e-06  Score=75.41  Aligned_cols=49  Identities=22%  Similarity=0.316  Sum_probs=38.0

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      .++||+.+ |+.|+++ ++++++||+++  ......++++|+... |+.++++.
T Consensus        74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~  122 (201)
T 2w43_A           74 KAYEDTKY-LKEISEI-AEVYALSNGSI--NEVKQHLERNGLLRY-FKGIFSAE  122 (201)
T ss_dssp             EECGGGGG-HHHHHHH-SEEEEEESSCH--HHHHHHHHHTTCGGG-CSEEEEGG
T ss_pred             ccCCChHH-HHHHHhC-CeEEEEeCcCH--HHHHHHHHHCCcHHh-CcEEEehh
Confidence            34788889 9999999 99999999863  234567888999876 57777654

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.20  E-value=1.3e-06  Score=80.25  Aligned_cols=61  Identities=28%  Similarity=0.420  Sum_probs=53.0

Q ss_pred             ccEEEEeccceeecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC--ChhHHHH
Q 019991           30 FKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSR--RASTTID   80 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~---------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~--~~~~~~~   80 (332)
                      .++|+||+||||.++.                           +++||+.++|+.|++.|++++|+||.+.  .++...+
T Consensus        58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~  137 (260)
T 3pct_A           58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVD  137 (260)
T ss_dssp             CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHH
T ss_pred             CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHH
Confidence            4599999999999873                           5789999999999999999999999764  4567788


Q ss_pred             HHHhCCCCcc
Q 019991           81 KLKSLGFDPS   90 (332)
Q Consensus        81 ~L~~lGl~~~   90 (332)
                      .|+++|++..
T Consensus       138 ~L~~lGi~~~  147 (260)
T 3pct_A          138 DMKRLGFTGV  147 (260)
T ss_dssp             HHHHHTCCCC
T ss_pred             HHHHcCcCcc
Confidence            9999999864

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.19  E-value=8.2e-07  Score=81.58  Aligned_cols=62  Identities=27%  Similarity=0.414  Sum_probs=53.5

Q ss_pred             CccEEEEeccceeecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCC--ChhHHH
Q 019991           29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSR--RASTTI   79 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~---------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~--~~~~~~   79 (332)
                      ..++|+||+||||.++.                           +++||+.++++.|++.|++++|+||.+.  ..+...
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~  136 (262)
T 3ocu_A           57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTI  136 (262)
T ss_dssp             CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHH
T ss_pred             CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHH
Confidence            45799999999999874                           3688999999999999999999999764  456678


Q ss_pred             HHHHhCCCCcc
Q 019991           80 DKLKSLGFDPS   90 (332)
Q Consensus        80 ~~L~~lGl~~~   90 (332)
                      ..|+++|++..
T Consensus       137 ~~L~~lGi~~~  147 (262)
T 3ocu_A          137 DDMKRLGFNGV  147 (262)
T ss_dssp             HHHHHHTCSCC
T ss_pred             HHHHHcCcCcc
Confidence            88999999863

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=98.18  E-value=1.6e-05  Score=71.62  Aligned_cols=41  Identities=24%  Similarity=0.254  Sum_probs=36.7

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      .|+||+||||.++..+.+...++|++++++|++++++|..+
T Consensus         2 li~~DlDGTLl~~~~i~~~~~~al~~l~~~Gi~v~iaTGR~   42 (259)
T 3zx4_A            2 IVFTDLDGTLLDERGELGPAREALERLRALGVPVVPVTAKT   42 (259)
T ss_dssp             EEEECCCCCCSCSSSSCSTTHHHHHHHHHTTCCEEEBCSSC
T ss_pred             EEEEeCCCCCcCCCcCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            68999999999988777888999999999999999998643

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.15  E-value=1.2e-06  Score=77.58  Aligned_cols=45  Identities=16%  Similarity=0.061  Sum_probs=39.6

Q ss_pred             CccEEEEeccceeecCCc-----------------------------------cCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           29 RFKAWLLDQFGVLHDGKK-----------------------------------PYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~-----------------------------------~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      .+++|+||+||||++...                                   +.||+.++|+.|+++|++++++||+++
T Consensus        36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~  115 (211)
T 2b82_A           36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP  115 (211)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred             CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence            489999999999999532                                   456999999999999999999999874

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.12  E-value=6.6e-07  Score=77.24  Aligned_cols=47  Identities=9%  Similarity=0.196  Sum_probs=35.4

Q ss_pred             ccCcCHHHHHHHHHHC-CCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           46 KPYPGAISTLEMLATT-GAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~-G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      .++||+.++|+.|+++ |++++++||+++..  ....|+++|+    |+.++++
T Consensus        73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~--~~~~l~~~gl----f~~i~~~  120 (193)
T 2i7d_A           73 EPIPGALDAVREMNDLPDTQVFICTSPLLKY--HHCVGEKYRW----VEQHLGP  120 (193)
T ss_dssp             CBCTTHHHHHHHHHTSTTEEEEEEECCCSSC--TTTHHHHHHH----HHHHHCH
T ss_pred             ccCcCHHHHHHHHHhCCCCeEEEEeCCChhh--HHHHHHHhCc----hhhhcCH
Confidence            4689999999999999 99999999987532  1234566666    3556655

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.10  E-value=1.8e-06  Score=73.24  Aligned_cols=93  Identities=5%  Similarity=-0.120  Sum_probs=57.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh--cCcccccCCCCHHHHHHHHHHhCC--eEE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKLWATLFTMILRV--QMQ  244 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g~e~~~~GKP~p~if~~Al~~lg~--~lm  244 (332)
                      .++++.++++.++++|.++ ++||........   . ...++..++...  ......-.||.+.....+++++..  +++
T Consensus        80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l~~~~~i~  155 (201)
T 4ap9_A           80 VSPEARELVETLREKGFKVVLISGSFEEVLEP---F-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRFRDGFILA  155 (201)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEEEETTTSGG---G-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGGTTSCEEE
T ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH---H-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhcCcCcEEE
Confidence            3588999999998999985 778755433221   1 111222221111  111111146666656677777643  799


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. +|+.+|+++|+. +++..
T Consensus       156 iGD~~-~Di~~~~~ag~~-v~~~~  177 (201)
T 4ap9_A          156 MGDGY-ADAKMFERADMG-IAVGR  177 (201)
T ss_dssp             EECTT-CCHHHHHHCSEE-EEESS
T ss_pred             EeCCH-HHHHHHHhCCce-EEECC
Confidence            99995 899999999996 55543

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.07  E-value=4.5e-06  Score=74.44  Aligned_cols=49  Identities=29%  Similarity=0.414  Sum_probs=37.9

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ++||+.++++.|+  |++++++||+++.  .....++++|+... |+.++++.+
T Consensus        94 ~~~~~~~~l~~l~--g~~~~i~t~~~~~--~~~~~l~~~gl~~~-f~~~~~~~~  142 (253)
T 1qq5_A           94 PYPDAAQCLAELA--PLKRAILSNGAPD--MLQALVANAGLTDS-FDAVISVDA  142 (253)
T ss_dssp             BCTTHHHHHHHHT--TSEEEEEESSCHH--HHHHHHHHTTCGGG-CSEEEEGGG
T ss_pred             CCccHHHHHHHHc--CCCEEEEeCcCHH--HHHHHHHHCCchhh-ccEEEEccc
Confidence            4688999999998  9999999998642  34567788998876 577776654

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.06  E-value=4.6e-07  Score=80.54  Aligned_cols=87  Identities=11%  Similarity=0.124  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccc--------cCCCCHH-HHH------
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRW--------MGKPDKL-WAT------  233 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~--------~GKP~p~-if~------  233 (332)
                      |+++.++++.|+++|.++ |+||........   .+.  ++..+ +.+ +.+...        ..||+|. ++.      
T Consensus        79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~---~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           79 REGFREFVAFINEHEIPFYVISGGMDFFVYP---LLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHH---HHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CccHHHHHHHHHhCCCeEEEEeCCcHHHHHH---HHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            578899999988889985 889875543321   122  23232 443 433332        2799999 465      


Q ss_pred             -HHHHHhCC----eEEEeCChhhHHHHHHHcCCcEE
Q 019991          234 -LFTMILRV----QMQLESSPYSLLEGSMQLNLDLT  264 (332)
Q Consensus       234 -~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti  264 (332)
                       .+++++++    .+||||+ .+|+.+|+++|+.++
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs-~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDS-VTDVEAAKLSDLCFA  187 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECC-GGGHHHHHTCSEEEE
T ss_pred             HHHHHHHhccCCeEEEEeCC-hHHHHHHHhCCeeee
Confidence             88899987    5999999 689999999999987

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.99  E-value=5.5e-06  Score=74.93  Aligned_cols=50  Identities=18%  Similarity=0.339  Sum_probs=38.3

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ++||+.++|+.|++ +++++++||+++.  .....|+++|+... |+.++++++
T Consensus       122 ~~~g~~~~L~~L~~-~~~l~i~Tn~~~~--~~~~~l~~~gl~~~-f~~i~~~~~  171 (260)
T 2gfh_A          122 LADDVKAMLTELRK-EVRLLLLTNGDRQ--TQREKIEACACQSY-FDAIVIGGE  171 (260)
T ss_dssp             CCHHHHHHHHHHHT-TSEEEEEECSCHH--HHHHHHHHHTCGGG-CSEEEEGGG
T ss_pred             CCcCHHHHHHHHHc-CCcEEEEECcChH--HHHHHHHhcCHHhh-hheEEecCC
Confidence            46778888999987 5999999998643  24566788999877 677777654

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.85  E-value=1.1e-05  Score=70.73  Aligned_cols=68  Identities=13%  Similarity=0.004  Sum_probs=53.3

Q ss_pred             CccEEEEeccceeecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGK------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS   84 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~   84 (332)
                      +..++++|+||||+++.                        ...||+.++|++|++. ++++++||+++..  ....++.
T Consensus        27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~--a~~vl~~  103 (195)
T 2hhl_A           27 GKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKY--ADPVADL  103 (195)
T ss_dssp             TCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH--HHHHHHH
T ss_pred             CCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHH--HHHHHHH
Confidence            67899999999999862                        3589999999999998 9999999987532  2345677


Q ss_pred             CCCCccccccccccHH
Q 019991           85 LGFDPSLFAGAITSGE  100 (332)
Q Consensus        85 lGl~~~~f~~Iits~~  100 (332)
                      +|.... |+.+++.++
T Consensus       104 ld~~~~-f~~~l~rd~  118 (195)
T 2hhl_A          104 LDRWGV-FRARLFRES  118 (195)
T ss_dssp             HCCSSC-EEEEECGGG
T ss_pred             hCCccc-EEEEEEccc
Confidence            777765 566666543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.85  E-value=1.4e-05  Score=67.88  Aligned_cols=54  Identities=9%  Similarity=0.028  Sum_probs=34.3

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCC-C--hhHHHHHHHh-CCCCccccccccccHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSR-R--ASTTIDKLKS-LGFDPSLFAGAITSGE  100 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~--~~~~~~~L~~-lGl~~~~f~~Iits~~  100 (332)
                      ..++||+.++|++|++. ++++++||+++ +  .......|.+ +|.... ++.++++.+
T Consensus        68 ~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~-~~~i~~~~~  125 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP-QHFVFCGRK  125 (180)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG-GGEEECSCG
T ss_pred             CCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc-ccEEEeCCc
Confidence            35789999999999984 99999999843 1  1222334554 555444 345555543

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.85  E-value=2.6e-05  Score=71.28  Aligned_cols=60  Identities=18%  Similarity=0.192  Sum_probs=48.7

Q ss_pred             cCccEEEEeccceeecC-CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDG-KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g-~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||.+. ....+...++|++|+++|++++++|+.+  ...+...++.+|+..
T Consensus         7 m~~~li~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaTGR~--~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A            7 QQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKT--SAEMLYLQKTLGLQG   67 (275)
T ss_dssp             CCCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSC--HHHHHHHHHHTTCTT
T ss_pred             cCceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEcCCC--HHHHHHHHHHcCCCC
Confidence            46899999999999995 4567889999999999999999999754  334556667787753

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.73  E-value=2.9e-05  Score=69.05  Aligned_cols=60  Identities=17%  Similarity=0.168  Sum_probs=47.7

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      |.++.+++|+||||.+... +-|.+.++|++|+++|++++++|+.+.  ..+...++.+|+..
T Consensus         3 mm~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~--~~~~~~~~~l~~~~   63 (227)
T 1l6r_A            3 HMIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVI--PVVYALKIFLGING   63 (227)
T ss_dssp             CCCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEECSSCH--HHHHHHHHHHTCCS
T ss_pred             cceEEEEEECCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCc--HHHHHHHHHhCCCC
Confidence            4589999999999998664 557889999999999999999998653  33445566777753

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.68  E-value=3.4e-05  Score=69.32  Aligned_cols=56  Identities=20%  Similarity=0.127  Sum_probs=45.2

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++.++||+||||+ ....++...++|++|+++|++++++|+.+.  ..+...++.+|+.
T Consensus         2 ikli~~DlDGTLl-~~~~~~~~~~~l~~l~~~g~~~~i~Tgr~~--~~~~~~~~~~~~~   57 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PGYEPDPAKPIIEELKDMGFEIIFNSSKTR--AEQEYYRKELEVE   57 (249)
T ss_dssp             EEEEEECCSTTTC-TTSCSGGGHHHHHHHHHTTEEEEEBCSSCH--HHHHHHHHHHTCC
T ss_pred             ccEEEEeCCCCcc-CCCCcHHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHcCCC
Confidence            6899999999999 666667799999999999999999998653  3344556667765

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=97.66  E-value=4.1e-05  Score=71.80  Aligned_cols=94  Identities=7%  Similarity=-0.056  Sum_probs=63.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH--------h-c--CcccccCCCCHHHHHHHHH
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--------L-G--GEVRWMGKPDKLWATLFTM  237 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~--------~-g--~e~~~~GKP~p~if~~Al~  237 (332)
                      .++++.++++.++++|.++ ++||.........   ....++...+..        . |  ......+||+|.+|..+++
T Consensus       179 ~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~---~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~  255 (335)
T 3n28_A          179 LMPELPELVATLHAFGWKVAIASGGFTYFSDYL---KEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ  255 (335)
T ss_dssp             CCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH---HHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHH---HHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence            3578889999998999985 7787543221110   000001111110        0 0  0234567999999999999


Q ss_pred             HhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          238 ILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       238 ~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ++|+    ++||||+. +|+.+|+++|+..++ +.
T Consensus       256 ~lgi~~~~~v~vGDs~-nDi~~a~~aG~~va~-~~  288 (335)
T 3n28_A          256 QYDVEIHNTVAVGDGA-NDLVMMAAAGLGVAY-HA  288 (335)
T ss_dssp             HHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE-SC
T ss_pred             HcCCChhhEEEEeCCH-HHHHHHHHCCCeEEe-CC
Confidence            9998    69999996 799999999998776 54

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=97.66  E-value=0.00016  Score=61.66  Aligned_cols=79  Identities=11%  Similarity=0.015  Sum_probs=58.2

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYS  251 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~  251 (332)
                      +++.|+++|.++ |+||......            ...++..|-+....+||+|..++.+++++|+    .+||||+. +
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~------------~~~~~~lgi~~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~-n  113 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVV------------AARARKLKIPVLHGIDRKDLALKQWCEEQGIAPERVLYVGNDV-N  113 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHH------------HHHHHHHTCCEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSG-G
T ss_pred             HHHHHHHCCCeEEEEECcChHHH------------HHHHHHcCCeeEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCH-H
Confidence            677888999986 7887654322            2223333333333459999999999999997    69999995 8


Q ss_pred             HHHHHHHcCCcEEEEec
Q 019991          252 LLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       252 DI~gA~~aG~~ti~~~~  268 (332)
                      |+.+|+++|+..++.+.
T Consensus       114 D~~~~~~ag~~v~~~~~  130 (176)
T 3mmz_A          114 DLPCFALVGWPVAVASA  130 (176)
T ss_dssp             GHHHHHHSSEEEECTTC
T ss_pred             HHHHHHHCCCeEECCCh
Confidence            99999999987766554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.63  E-value=4.7e-05  Score=70.64  Aligned_cols=68  Identities=15%  Similarity=0.128  Sum_probs=49.6

Q ss_pred             ccccHHHHhhhcCccEEEEeccceeecC-C-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHH--HhCC
Q 019991           17 TLNGLRHIAETRRFKAWLLDQFGVLHDG-K-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL--KSLG   86 (332)
Q Consensus        17 ~~~~~~~~~~~~~~~~vlfDlDGvL~~g-~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L--~~lG   86 (332)
                      +...+..-+..|.++.|+||+||||++. . .+-+...++|++|+++|++++++|..+  ...+...+  +.+|
T Consensus        14 ~~~~~~~~~~~M~ikli~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~--~~~~~~~~~~~~l~   85 (301)
T 2b30_A           14 PDLKVEEALKGADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRS--KVGILSAFGEENLK   85 (301)
T ss_dssp             ---CHHHHTTTCCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSC--HHHHHHHHCHHHHH
T ss_pred             CCeehhhccccccccEEEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHhhHHhhc
Confidence            4445566666456899999999999997 4 566778999999999999999999755  33344445  5555

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.43  E-value=0.00011  Score=66.19  Aligned_cols=45  Identities=13%  Similarity=0.054  Sum_probs=39.3

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |.++.++||+||||.+... +-+...++|++|+++|++++++|..+
T Consensus         2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~   47 (246)
T 3f9r_A            2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSD   47 (246)
T ss_dssp             CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            5689999999999999774 55677899999999999999999754

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=97.41  E-value=0.00036  Score=61.61  Aligned_cols=78  Identities=10%  Similarity=0.008  Sum_probs=57.3

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPY  250 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~  250 (332)
                      +++.|+++|+++ |+||.....            ....++..|-.. ....||.|.++..+++++|+    ++||||+. 
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~------------~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~lg~~~~~~~~vGDs~-  150 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKL------------LEDRANTLGITHLYQGQSDKLVAYHELLATLQCQPEQVAYIGDDL-  150 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHH------------HHHHHHHHTCCEEECSCSSHHHHHHHHHHHHTCCGGGEEEEECSG-
T ss_pred             HHHHHHHCCCEEEEEeCCCHHH------------HHHHHHHcCCchhhcccCChHHHHHHHHHHcCcCcceEEEEcCCH-
Confidence            778888999986 778754321            222333333332 23349999999999999997    69999995 


Q ss_pred             hHHHHHHHcCCcEEEEe
Q 019991          251 SLLEGSMQLNLDLTVME  267 (332)
Q Consensus       251 ~DI~gA~~aG~~ti~~~  267 (332)
                      .|+.+|+++|+..+..+
T Consensus       151 nDi~~~~~ag~~~a~~~  167 (211)
T 3ij5_A          151 IDWPVMAQVGLSVAVAD  167 (211)
T ss_dssp             GGHHHHTTSSEEEECTT
T ss_pred             HHHHHHHHCCCEEEeCC
Confidence            89999999999876544

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.40  E-value=0.00024  Score=60.32  Aligned_cols=43  Identities=26%  Similarity=0.281  Sum_probs=31.1

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ..+.||+.++|+.++++|++++++||++..  .....++.+|+..
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~--~~~~~~~~~~~~~  117 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDI--AVNKIKEKLGLDY  117 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHH--HHHHHHHHHTCSE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHH--HHHHHHHHcCCCe
Confidence            345688888999999999999999986532  2234466677754

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=97.39  E-value=0.0004  Score=60.52  Aligned_cols=81  Identities=7%  Similarity=-0.042  Sum_probs=59.1

Q ss_pred             HHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCCh
Q 019991          176 KILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRV----QMQLESSP  249 (332)
Q Consensus       176 ~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~  249 (332)
                      ..++.|+++|+++ |+||.....            ....++..|-.. ....||+|..+..+++++|+    .+||||+.
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~------------~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~  126 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQI------------VENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDDL  126 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHH------------HHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCCCGGGEEEEESSG
T ss_pred             HHHHHHHHCCCEEEEEECcCHHH------------HHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCCCHHHEEEEcCCH
Confidence            3577888999985 788864322            222333343332 33459999999999999998    69999995


Q ss_pred             hhHHHHHHHcCCcEEEEecc
Q 019991          250 YSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       250 ~~DI~gA~~aG~~ti~~~~~  269 (332)
                       +|+.+++++|+..+..|..
T Consensus       127 -nDi~~~~~ag~~va~~na~  145 (195)
T 3n07_A          127 -IDWPVMEKVALRVCVADGH  145 (195)
T ss_dssp             -GGHHHHTTSSEEEECTTSC
T ss_pred             -HHHHHHHHCCCEEEECChH
Confidence             8999999999887654543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.38  E-value=0.0001  Score=63.58  Aligned_cols=67  Identities=10%  Similarity=-0.023  Sum_probs=51.5

Q ss_pred             CccEEEEeccceeecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh
Q 019991           29 RFKAWLLDQFGVLHDGK------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS   84 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~   84 (332)
                      +..++++|+|+||+++.                        .+.||+.++|+++.+. ++++++||+++..  ....++.
T Consensus        14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~--a~~vl~~   90 (181)
T 2ght_A           14 DKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKY--ADPVADL   90 (181)
T ss_dssp             TSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH--HHHHHHH
T ss_pred             CCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHH--HHHHHHH
Confidence            56799999999999862                        4699999999999998 9999999987532  2344566


Q ss_pred             CCCCccccccccccH
Q 019991           85 LGFDPSLFAGAITSG   99 (332)
Q Consensus        85 lGl~~~~f~~Iits~   99 (332)
                      +|.... |..+++.+
T Consensus        91 ld~~~~-f~~~~~rd  104 (181)
T 2ght_A           91 LDKWGA-FRARLFRE  104 (181)
T ss_dssp             HCTTCC-EEEEECGG
T ss_pred             HCCCCc-EEEEEecc
Confidence            777655 56666543

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=97.37  E-value=0.00063  Score=58.50  Aligned_cols=79  Identities=10%  Similarity=0.056  Sum_probs=56.6

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPY  250 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~  250 (332)
                      +++.|+++|+++ |+||.....            ....++..|-.. ....+|.|..++.+++++|+    .+||||+. 
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~------------~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~g~~~~~~~~vGD~~-  120 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAI------------VERRAKSLGIEHLFQGREDKLVVLDKLLAELQLGYEQVAYLGDDL-  120 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHH------------HHHHHHHHTCSEEECSCSCHHHHHHHHHHHHTCCGGGEEEEECSG-
T ss_pred             HHHHHHHCCCEEEEEECcChHH------------HHHHHHHcCCHHHhcCcCChHHHHHHHHHHcCCChhHEEEECCCH-
Confidence            788888999986 788864422            222333333322 22237778999999999997    69999995 


Q ss_pred             hHHHHHHHcCCcEEEEec
Q 019991          251 SLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       251 ~DI~gA~~aG~~ti~~~~  268 (332)
                      +|+.+|+++|+..+..+.
T Consensus       121 nDi~~~~~ag~~~~~~~~  138 (189)
T 3mn1_A          121 PDLPVIRRVGLGMAVANA  138 (189)
T ss_dssp             GGHHHHHHSSEEEECTTS
T ss_pred             HHHHHHHHCCCeEEeCCc
Confidence            899999999997765443

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.21  E-value=0.00053  Score=58.11  Aligned_cols=91  Identities=11%  Similarity=0.068  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-h-------cCc---ccccCCCCHHHHHHHHHHh
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L-------GGE---VRWMGKPDKLWATLFTMIL  239 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~-------g~e---~~~~GKP~p~if~~Al~~l  239 (332)
                      +++.++++.++++|+++ ++||............++   +...+.. +       ..+   ....++|.|..+..+++++
T Consensus        79 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~l  155 (211)
T 1l7m_A           79 EGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG---LDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIE  155 (211)
T ss_dssp             TTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHT---CSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcC---CCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHc
Confidence            56788898888899885 677754432211000000   0000000 0       000   0123667789999999999


Q ss_pred             CC----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          240 RV----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       240 g~----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      |+    .++|||+. +|+.+|+++|+. +++.
T Consensus       156 gi~~~~~~~iGD~~-~Di~~~~~ag~~-~~~~  185 (211)
T 1l7m_A          156 GINLEDTVAVGDGA-NDISMFKKAGLK-IAFC  185 (211)
T ss_dssp             TCCGGGEEEEECSG-GGHHHHHHCSEE-EEES
T ss_pred             CCCHHHEEEEecCh-hHHHHHHHCCCE-EEEC
Confidence            98    69999995 899999999995 5555

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=97.17  E-value=0.00031  Score=64.51  Aligned_cols=68  Identities=19%  Similarity=0.185  Sum_probs=50.8

Q ss_pred             ccEEEEeccceeecCC-------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCC-hhHHHHHHHh--------CCC
Q 019991           30 FKAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKS--------LGF   87 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~-------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~~~~~~L~~--------lGl   87 (332)
                      .+.+++|+||++....             .++||+.++|+.|+++|++++++||++.. .+...+.|+.        +|+
T Consensus       159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~  238 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV  238 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC
T ss_pred             cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC
Confidence            4689999999976533             24899999999999999999999998753 2223445666        888


Q ss_pred             CccccccccccHH
Q 019991           88 DPSLFAGAITSGE  100 (332)
Q Consensus        88 ~~~~f~~Iits~~  100 (332)
                        . |+.++++++
T Consensus       239 --~-~~~~~~~~~  248 (301)
T 1ltq_A          239 --P-LVMQCQREQ  248 (301)
T ss_dssp             --C-CSEEEECCT
T ss_pred             --C-chheeeccC
Confidence              3 466665543

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=97.16  E-value=0.0011  Score=60.72  Aligned_cols=100  Identities=14%  Similarity=0.113  Sum_probs=68.5

Q ss_pred             CccEEEEeccceeec----CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~----g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      ..+.+.+|.|+++..    ...++||+.++|+.|+++|++++++||+++.  .....++.+|+... |+.++....  ..
T Consensus       142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~--~~~~~l~~~gl~~~-f~~i~~~~K--~~  216 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR--SAEAISRELNLDLV-IAEVLPHQK--SE  216 (287)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHTCSEE-ECSCCTTCH--HH
T ss_pred             CCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHH--HHHHHHHHhCCcee-eeecChHHH--HH
Confidence            457899999997653    5689999999999999999999999997643  24456778899876 566664322  12


Q ss_pred             HHhhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       105 ~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      .+++...     - .+++.+|.+..+...++..|+
T Consensus       217 ~~~~l~~-----~-~~~~~vGDs~~Di~~a~~ag~  245 (287)
T 3a1c_A          217 EVKKLQA-----K-EVVAFVGDGINDAPALAQADL  245 (287)
T ss_dssp             HHHHHTT-----T-CCEEEEECTTTCHHHHHHSSE
T ss_pred             HHHHHhc-----C-CeEEEEECCHHHHHHHHHCCe
Confidence            2222211     1 467777866544444555554

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=97.12  E-value=0.00047  Score=61.46  Aligned_cols=44  Identities=20%  Similarity=0.126  Sum_probs=37.6

Q ss_pred             cCccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      |+++.+++|+||||.+... +-+...++|++|+++ ++++++|..+
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-i~v~iaTGR~   48 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK-IKIGVVGGSD   48 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT-SEEEEECSSC
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHHHHHHHhC-CeEEEEcCCC
Confidence            4789999999999998765 446788999999998 9999999753

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=97.10  E-value=0.00059  Score=60.17  Aligned_cols=48  Identities=15%  Similarity=0.054  Sum_probs=33.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      .++||+.++|+.|+++|++++++||+++.  .....++  |+...  +.++++.
T Consensus        77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~--~~~~~l~--~l~~~--~~v~~~~  124 (236)
T 2fea_A           77 KIREGFREFVAFINEHEIPFYVISGGMDF--FVYPLLE--GIVEK--DRIYCNH  124 (236)
T ss_dssp             CBCTTHHHHHHHHHHHTCCEEEEEEEEHH--HHHHHHT--TTSCG--GGEEEEE
T ss_pred             CCCccHHHHHHHHHhCCCeEEEEeCCcHH--HHHHHHh--cCCCC--CeEEeee
Confidence            46899999999999999999999997542  1223334  66432  4566554

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=97.08  E-value=0.00054  Score=64.09  Aligned_cols=43  Identities=16%  Similarity=0.071  Sum_probs=34.0

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      +++||+.++++.|++.|++++++||+..  ......++++|+...
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~--~~~~~~~~~lgl~~~  220 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFT--YFSDYLKEQLSLDYA  220 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHHTCSEE
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcH--HHHHHHHHHcCCCeE
Confidence            4689999999999999999999999753  223455677888754

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.04  E-value=0.0015  Score=55.51  Aligned_cols=79  Identities=9%  Similarity=0.010  Sum_probs=54.0

Q ss_pred             HHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhh
Q 019991          177 ILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYS  251 (332)
Q Consensus       177 ~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~  251 (332)
                      +++.|+++|+++ |+||. .. ...   .+..      + ..+-....-+||.|..+..+++++|+    ++||||+. +
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~-~~-~~~---~l~~------l-~lgi~~~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~-n  110 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER-AC-SKQ---TLSA------L-KLDCKTEVSVSDKLATVDEWRKEMGLCWKEVAYLGNEV-S  110 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS-CC-CHH---HHHT------T-CCCCCEECSCSCHHHHHHHHHHHTTCCGGGEEEECCSG-G
T ss_pred             HHHHHHHCCCEEEEEeCc-HH-HHH---HHHH------h-CCCcEEEECCCChHHHHHHHHHHcCcChHHEEEEeCCH-h
Confidence            678888999996 78887 21 111   0110      0 01111112257899999999999998    69999995 8


Q ss_pred             HHHHHHHcCCcEEEEec
Q 019991          252 LLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       252 DI~gA~~aG~~ti~~~~  268 (332)
                      |+.+++++|+..+.-|.
T Consensus       111 Di~~~~~ag~~~a~~na  127 (168)
T 3ewi_A          111 DEECLKRVGLSAVPADA  127 (168)
T ss_dssp             GHHHHHHSSEEEECTTC
T ss_pred             HHHHHHHCCCEEEeCCh
Confidence            99999999998654343

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=96.96  E-value=1.5e-05  Score=68.57  Aligned_cols=77  Identities=8%  Similarity=-0.007  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHhC-CCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          171 LQDLEKILEICASK-KIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       171 y~~l~~~l~~l~~~-g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      ++++.++++.|+++ |.++ |+||........   .+...++   |+.+ ++              .+++++|+    .+
T Consensus        75 ~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~---~l~~~gl---f~~i~~~--------------~~~~~~~~~~~~~~  134 (193)
T 2i7d_A           75 IPGALDAVREMNDLPDTQVFICTSPLLKYHHC---VGEKYRW---VEQHLGP--------------QFVERIILTRDKTV  134 (193)
T ss_dssp             CTTHHHHHHHHHTSTTEEEEEEECCCSSCTTT---HHHHHHH---HHHHHCH--------------HHHTTEEECSCGGG
T ss_pred             CcCHHHHHHHHHhCCCCeEEEEeCCChhhHHH---HHHHhCc---hhhhcCH--------------HHHHHcCCCcccEE
Confidence            57889999998888 8885 889876543221   1221122   5543 32              16677776    48


Q ss_pred             EEeCChhhH----HHHHH-HcCCcEEEEec
Q 019991          244 QLESSPYSL----LEGSM-QLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~D----I~gA~-~aG~~ti~~~~  268 (332)
                      ||||++ .|    +++|+ ++||++|+++.
T Consensus       135 ~vgDs~-~dD~~~i~~A~~~aG~~~i~~~~  163 (193)
T 2i7d_A          135 VLGDLL-IDDKDTVRGQEETPSWEHILFTC  163 (193)
T ss_dssp             BCCSEE-EESSSCCCSSCSSCSSEEEEECC
T ss_pred             EECCch-hhCcHHHhhcccccccceEEEEe
Confidence            999996 56    99999 99999999965

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=96.93  E-value=0.00025  Score=71.12  Aligned_cols=96  Identities=13%  Similarity=0.126  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHhCCCc-EEEecCCccceeccc-eecC------C----ChhHHHHHH-h--cCcccccCCCCH-------
Q 019991          172 QDLEKILEICASKKIP-MVVANPDYVTVEARA-LRVM------P----GTLASKFEK-L--GGEVRWMGKPDK-------  229 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~-~~l~------~----G~i~~~~e~-~--g~e~~~~GKP~p-------  229 (332)
                      +++...|+.+++.| + +++||++..+..... ..++      +    -.+..+|+. +  .++|..++...|       
T Consensus       249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~Vd~~  327 (555)
T 2jc9_A          249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTK  327 (555)
T ss_dssp             THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEEETT
T ss_pred             hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEeecC
Confidence            46777788888889 7 588999876543211 0111      0    236667776 2  233333321000       


Q ss_pred             ----------------HH-----HHHHHHHhCC----eEEEeCChhhHHHHHH-HcCCcEEEEec
Q 019991          230 ----------------LW-----ATLFTMILRV----QMQLESSPYSLLEGSM-QLNLDLTVMEK  268 (332)
Q Consensus       230 ----------------~i-----f~~Al~~lg~----~lmIGDs~~~DI~gA~-~aG~~ti~~~~  268 (332)
                                      .+     +..+++.+|.    +++|||.+.+||.+|+ .+||+|++|-.
T Consensus       328 tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP  392 (555)
T 2jc9_A          328 TGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP  392 (555)
T ss_dssp             TTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred             CCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence                            01     5888888887    6999999999999997 89999999943

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.93  E-value=0.00051  Score=61.30  Aligned_cols=42  Identities=19%  Similarity=0.149  Sum_probs=35.3

Q ss_pred             ccEEEEeccceeecC------CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           30 FKAWLLDQFGVLHDG------KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g------~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      ++.+++|+||||.+.      ..+-+...++|++|+++| +++++|..+
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~   48 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRS   48 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSC
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCC
Confidence            468999999999973      356678899999999999 999999754

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=96.89  E-value=0.0029  Score=55.99  Aligned_cols=124  Identities=15%  Similarity=0.182  Sum_probs=75.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHH---------HHHhhcCChhhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH---------QYLLRRDDAWFAA  116 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~---------~~L~~~~~~~~~~  116 (332)
                      .++||+.++++.|+++|++++++||+.+    ....|+++|+... |+.++++.++..         ..+++.+.     
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~----~~~~l~~~gl~~~-fd~i~~~~~~~~~KP~p~~~~~a~~~lg~-----  164 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSLN----APTILAALELREF-FTFCADASQLKNSKPDPEIFLAACAGLGV-----  164 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCTT----HHHHHHHTTCGGG-CSEECCGGGCSSCTTSTHHHHHHHHHHTS-----
T ss_pred             cccccHHHHHHhhhcccccceecccccc----hhhhhhhhhhccc-cccccccccccCCCCcHHHHHHHHHHcCC-----
Confidence            3689999999999999999999998653    2345889999888 688888776432         11222211     


Q ss_pred             cCCeEEEeecCcccchhhhcCCcccc---CCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCCcEEEe
Q 019991          117 LGRSCIHMTWSDRGAISLEGLGLKVV---ENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA  191 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~g~~~~---~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~~lIaT  191 (332)
                      -..+++++|.+..+....+..|+...   .....++.++-.           ...++++.+.+.++.+ .+..-+-..
T Consensus       165 ~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~-----------~~~l~~~~l~~~~~~l-~~~l~~~~~  230 (243)
T 4g9b_A          165 PPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPS-----------TESLTWPRLSAFWQNV-AENLYFQSH  230 (243)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESS-----------GGGCCHHHHHHHHHHH-SCCGGGC--
T ss_pred             ChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCC-----------hhhcCHHHHHHHHHHH-HHHhhhhhh
Confidence            12467777765444334455565321   111233333221           1567889999998875 334333333

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=96.80  E-value=0.006  Score=52.56  Aligned_cols=84  Identities=18%  Similarity=0.207  Sum_probs=55.0

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH---------HHhhcCChhhhhc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ---------YLLRRDDAWFAAL  117 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~---------~L~~~~~~~~~~~  117 (332)
                      ++||+.++++.|++.|++++++||+++    ....++.+|+... |+.++++.++...         .+++.+.+     
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~l~~~gl~~~-f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~-----  162 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN----APKILRRLAIIDD-FHAIVDPTTLAKGKPDPDIFLTAAAMLDVS-----  162 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT----HHHHHHHTTCTTT-CSEECCC---------CCHHHHHHHHHTSC-----
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh----HHHHHHHcCcHhh-cCEEeeHhhCCCCCCChHHHHHHHHHcCCC-----
Confidence            699999999999999999999999754    4466889999887 6888887654321         12222111     


Q ss_pred             CCeEEEeecCcccchhhhcCCcc
Q 019991          118 GRSCIHMTWSDRGAISLEGLGLK  140 (332)
Q Consensus       118 G~~v~~~g~~~~~~~~l~~~g~~  140 (332)
                      ..+++.+|.+..+....+..|+.
T Consensus       163 ~~~~i~vGDs~~Di~~a~~aG~~  185 (233)
T 3nas_A          163 PADCAAIEDAEAGISAIKSAGMF  185 (233)
T ss_dssp             GGGEEEEECSHHHHHHHHHTTCE
T ss_pred             HHHEEEEeCCHHHHHHHHHcCCE
Confidence            14577777654433445666653

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=96.79  E-value=0.00035  Score=62.53  Aligned_cols=54  Identities=7%  Similarity=-0.036  Sum_probs=39.3

Q ss_pred             EEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        32 ~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      .+++|+||||.+....++...++|++++ .|++++++|..  +...+...++.+|+.
T Consensus         5 li~~DlDGTLl~~~~~~~~~~~~l~~~~-~gi~v~iaTGR--~~~~~~~~~~~l~l~   58 (244)
T 1s2o_A            5 LLISDLDNTWVGDQQALEHLQEYLGDRR-GNFYLAYATGR--SYHSARELQKQVGLM   58 (244)
T ss_dssp             EEEECTBTTTBSCHHHHHHHHHHHHTTG-GGEEEEEECSS--CHHHHHHHHHHHTCC
T ss_pred             EEEEeCCCCCcCCHHHHHHHHHHHHHhc-CCCEEEEEcCC--CHHHHHHHHHHcCCC
Confidence            8999999999997755566666676655 57889999964  344455666776664

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.66  E-value=0.0011  Score=59.77  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=35.8

Q ss_pred             CccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCC
Q 019991           29 RFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNS   71 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~   71 (332)
                      +++.+++|+||||.+... +-+...++|++|+++ ++++++|..
T Consensus        12 ~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~-i~v~iaTGR   54 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR-VQIGVVGGS   54 (262)
T ss_dssp             -CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT-SEEEEECSS
T ss_pred             CeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhC-CEEEEEcCC
Confidence            578999999999998775 447788999999988 999999964

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=96.53  E-value=0.00028  Score=64.39  Aligned_cols=107  Identities=12%  Similarity=0.018  Sum_probs=62.4

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhH--HHHHHh-cCcccccCCCCHHHHHHHH-HHhCCeEE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEKL-GGEVRWMGKPDKLWATLFT-MILRVQMQ  244 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~--~~~e~~-g~e~~~~GKP~p~if~~Al-~~lg~~lm  244 (332)
                      .++++.++++.|.++|+++ |+||........-...+...++.  ..++.+ +.+  ...||.+.  ..+. ......+|
T Consensus       102 ~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~--~~~K~~~~--~~~~~~~~~~~l~  177 (258)
T 2i33_A          102 ALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDP--KEKGKEKR--RELVSQTHDIVLF  177 (258)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECT--TCCSSHHH--HHHHHHHEEEEEE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCC--CCCCcHHH--HHHHHhCCCceEE
Confidence            3578899999999999986 88986532111000001100111  112221 221  12466553  3232 23334789


Q ss_pred             EeCChhhHHHHHH-------H---------cCCcEEEEecchhhHHHHHHHhh
Q 019991          245 LESSPYSLLEGSM-------Q---------LNLDLTVMEKLQIYLLFKLLYLN  281 (332)
Q Consensus       245 IGDs~~~DI~gA~-------~---------aG~~ti~~~~~~~~~~~~~~~~~  281 (332)
                      |||++ +||++|.       +         +|++++.++.-.-.-.-+.+|-|
T Consensus       178 VGDs~-~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~~~~~~~  229 (258)
T 2i33_A          178 FGDNL-SDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWEGALYDY  229 (258)
T ss_dssp             EESSG-GGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHHHHHTTT
T ss_pred             eCCCH-HHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhhhhhcCC
Confidence            99996 7999993       4         89999999777666666777754

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=96.51  E-value=0.0033  Score=54.51  Aligned_cols=89  Identities=21%  Similarity=0.186  Sum_probs=57.9

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCChh
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDDAW  113 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~~~  113 (332)
                      ....++||+.++|+.|++.|++++++||+++  ......++.+|+... |+.++++.+         .....+++.+.+ 
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~gl~~~-f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-  155 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLE--ELSKKILDILNLSGY-FDLIVGGDTFGEKKPSPTPVLKTLEILGEE-  155 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCH--HHHHHHHHHTTCGGG-CSEEECTTSSCTTCCTTHHHHHHHHHHTCC-
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCH--HHHHHHHHHcCCHHH-heEEEecCcCCCCCCChHHHHHHHHHhCCC-
Confidence            4567899999999999999999999999753  234567788998766 577776542         222223332211 


Q ss_pred             hhhcCCeEEEeecCcccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          ..+++.+|.+..+....+..|+
T Consensus       156 ----~~~~~~vGD~~~Di~~a~~aG~  177 (222)
T 2nyv_A          156 ----PEKALIVGDTDADIEAGKRAGT  177 (222)
T ss_dssp             ----GGGEEEEESSHHHHHHHHHHTC
T ss_pred             ----chhEEEECCCHHHHHHHHHCCC
Confidence                2356777765433334445554

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=96.49  E-value=0.0063  Score=54.24  Aligned_cols=85  Identities=25%  Similarity=0.209  Sum_probs=57.9

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH---------HHHHhhcCChhhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT---------HQYLLRRDDAWFAA  116 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~---------~~~L~~~~~~~~~~  116 (332)
                      .++||+.++|+.|++.|++++++||++..   +...|+.+|+... |+.++++.++.         ...+++.+.+    
T Consensus       106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~---~~~~l~~~gl~~~-f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~----  177 (263)
T 3k1z_A          106 QVLDGAEDTLRECRTRGLRLAVISNFDRR---LEGILGGLGLREH-FDFVLTSEAAGWPKPDPRIFQEALRLAHME----  177 (263)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCCTT---HHHHHHHTTCGGG-CSCEEEHHHHSSCTTSHHHHHHHHHHHTCC----
T ss_pred             eECcCHHHHHHHHHhCCCcEEEEeCCcHH---HHHHHHhCCcHHh-hhEEEeecccCCCCCCHHHHHHHHHHcCCC----
Confidence            58999999999999999999999996543   4567889999877 68888776542         1122222211    


Q ss_pred             cCCeEEEeecCc-ccchhhhcCCc
Q 019991          117 LGRSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       117 ~G~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                       ..+++++|.+. .+....+..|+
T Consensus       178 -~~~~~~vGD~~~~Di~~a~~aG~  200 (263)
T 3k1z_A          178 -PVVAAHVGDNYLCDYQGPRAVGM  200 (263)
T ss_dssp             -GGGEEEEESCHHHHTHHHHTTTC
T ss_pred             -HHHEEEECCCcHHHHHHHHHCCC
Confidence             24677778763 33334555565

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=96.48  E-value=0.0017  Score=55.91  Aligned_cols=52  Identities=23%  Similarity=0.320  Sum_probs=42.1

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++|+.|++ |++++++||+++.  .....|+++|+... |+.++++.
T Consensus        82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~--~~~~~l~~~gl~~~-f~~i~~~~  133 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTS--TAQDMAKNLEIHHF-FDGIYGSS  133 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-TSCEEEEEEEEHH--HHHHHHHHTTCGGG-CSEEEEEC
T ss_pred             CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHH--HHHHHHHhcCchhh-eeeeecCC
Confidence            35789999999999999 9999999997642  24567889999887 67777654

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=96.44  E-value=0.0021  Score=55.16  Aligned_cols=52  Identities=19%  Similarity=0.445  Sum_probs=43.9

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++++.|++.|++++++||+++.  .....++.+|+... |+.++++++
T Consensus        84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~--~~~~~l~~~~l~~~-fd~~~~~~~  135 (216)
T 3kbb_A           84 KENPGVREALEFVKSKRIKLALATSTPQR--EALERLRRLDLEKY-FDVMVFGDQ  135 (216)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHTTCGGG-CSEEECGGG
T ss_pred             ccCccHHHHHHHHHHcCCCcccccCCcHH--HHHHHHHhcCCCcc-ccccccccc
Confidence            57899999999999999999999998643  34567889999988 788888764

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=96.41  E-value=0.0045  Score=52.02  Aligned_cols=86  Identities=13%  Similarity=0.178  Sum_probs=57.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCChhhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDDAWFAA  116 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~~~~~~  116 (332)
                      .++||+.++++.|++.|++++++||++.  ......++++|+... |+.++++.+         .....+++.+.+    
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~----  161 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVK--ADIFRALEENRLQGF-FDIVLSGEEFKESKPNPEIYLTALKQLNVQ----  161 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHTTCGGG-CSEEEEGGGCSSCTTSSHHHHHHHHHHTCC----
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcH--HHHHHHHHHcCcHhh-eeeEeecccccCCCCChHHHHHHHHHcCCC----
Confidence            4789999999999999999999999854  335567889999877 577776643         222233333211    


Q ss_pred             cCCeEEEeecCcccchhhhcCCc
Q 019991          117 LGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                       ..+++.+|.+..+....+..|+
T Consensus       162 -~~~~~~iGD~~~Di~~a~~aG~  183 (214)
T 3e58_A          162 -ASRALIIEDSEKGIAAGVAADV  183 (214)
T ss_dssp             -GGGEEEEECSHHHHHHHHHTTC
T ss_pred             -hHHeEEEeccHhhHHHHHHCCC
Confidence             1357777766443344555665

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=96.40  E-value=0.015  Score=51.41  Aligned_cols=115  Identities=17%  Similarity=0.250  Sum_probs=71.4

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHH---------HHHhhcCChhhhhc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH---------QYLLRRDDAWFAAL  117 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~---------~~L~~~~~~~~~~~  117 (332)
                      ++||+.++++.|++.|+++++.||+..    ....|+++|+... |+.+++++++..         ..+++.+.+     
T Consensus       117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~~----~~~~L~~~gl~~~-Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~-----  186 (250)
T 4gib_A          117 ILPGIESLLIDVKSNNIKIGLSSASKN----AINVLNHLGISDK-FDFIADAGKCKNNKPHPEIFLMSAKGLNVN-----  186 (250)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT----HHHHHHHHTCGGG-CSEECCGGGCCSCTTSSHHHHHHHHHHTCC-----
T ss_pred             cchhHHHHHHHHHhcccccccccccch----hhhHhhhcccccc-cceeecccccCCCCCcHHHHHHHHHHhCCC-----
Confidence            689999999999999999988665432    3356889999988 788888765421         112222110     


Q ss_pred             CCeEEEeecCcccchhhhcCCcccc-----CCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 019991          118 GRSCIHMTWSDRGAISLEGLGLKVV-----ENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (332)
Q Consensus       118 G~~v~~~g~~~~~~~~l~~~g~~~~-----~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~  182 (332)
                      ..+++++|.+..+....+..|+...     ++..+||.++- +          -.+++++.+.+.++..+
T Consensus       187 p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~-~----------l~eL~~~~i~~~~n~~~  245 (250)
T 4gib_A          187 PQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVD-S----------TNQLKFEYIQEKYNEYI  245 (250)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEES-S----------GGGCCHHHHHHHHHHHH
T ss_pred             hHHeEEECCCHHHHHHHHHcCCEEEEECChhHhccCCEEEC-C----------hHhCCHHHHHHHHHHHH
Confidence            1357777865444334555665321     12345665433 1          14566788877776543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=96.32  E-value=9.7e-05  Score=66.16  Aligned_cols=86  Identities=8%  Similarity=-0.046  Sum_probs=52.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCCeEEEeC
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRVQMQLES  247 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~~lmIGD  247 (332)
                      .++++.++++.|.++|.++ ++||.........   +...++..+|..+ +.+.....||.|..+        -.+||||
T Consensus       145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~---~~~~gl~~~f~~~~~~~k~~~~k~~~~~~--------~~~~vGD  213 (280)
T 3skx_A          145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWV---AEELGLDDYFAEVLPHEKAEKVKEVQQKY--------VTAMVGD  213 (280)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH---HHHHTCSEEECSCCGGGHHHHHHHHHTTS--------CEEEEEC
T ss_pred             CCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHcCChhHhHhcCHHHHHHHHHHHHhcC--------CEEEEeC
Confidence            4688999999998899986 7788655432211   1111122222221 222233345555443        3699999


Q ss_pred             ChhhHHHHHHHcCCcEEEEe
Q 019991          248 SPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       248 s~~~DI~gA~~aG~~ti~~~  267 (332)
                      +. +|+++|+++|+..++-+
T Consensus       214 ~~-nDi~~~~~Ag~~va~~~  232 (280)
T 3skx_A          214 GV-NDAPALAQADVGIAIGA  232 (280)
T ss_dssp             TT-TTHHHHHHSSEEEECSC
T ss_pred             Cc-hhHHHHHhCCceEEecC
Confidence            95 79999999998555544

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=96.18  E-value=0.0059  Score=52.62  Aligned_cols=91  Identities=19%  Similarity=0.134  Sum_probs=60.8

Q ss_pred             eecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCC
Q 019991           41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDD  111 (332)
Q Consensus        41 L~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~  111 (332)
                      ......++||+.++++.|++.|++++++||+++  ......++.+|+... |+.++++.+         .....+++.+.
T Consensus        98 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~--~~~~~~l~~~gl~~~-f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi  174 (231)
T 3kzx_A           98 KSDNFMLNDGAIELLDTLKENNITMAIVSNKNG--ERLRSEIHHKNLTHY-FDSIIGSGDTGTIKPSPEPVLAALTNINI  174 (231)
T ss_dssp             SCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHTTCGGG-CSEEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred             ccccceECcCHHHHHHHHHHCCCeEEEEECCCH--HHHHHHHHHCCchhh-eeeEEcccccCCCCCChHHHHHHHHHcCC
Confidence            345668899999999999999999999999753  235567889999876 577766543         22223333321


Q ss_pred             hhhhhcCC-eEEEeecCcccchhhhcCCc
Q 019991          112 AWFAALGR-SCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       112 ~~~~~~G~-~v~~~g~~~~~~~~l~~~g~  139 (332)
                      +     .. +++.+|.+..+....+..|+
T Consensus       175 ~-----~~~~~v~vGD~~~Di~~a~~aG~  198 (231)
T 3kzx_A          175 E-----PSKEVFFIGDSISDIQSAIEAGC  198 (231)
T ss_dssp             C-----CSTTEEEEESSHHHHHHHHHTTC
T ss_pred             C-----cccCEEEEcCCHHHHHHHHHCCC
Confidence            1     23 57777765544444566665

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=96.17  E-value=0.0087  Score=51.23  Aligned_cols=89  Identities=16%  Similarity=0.148  Sum_probs=59.2

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH---------HHHHHhhcCChh
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL---------THQYLLRRDDAW  113 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v---------~~~~L~~~~~~~  113 (332)
                      ....++||+.++++.|++.|++++++||++.  ......++++|+... |+.++++...         ....+++.+.+ 
T Consensus        88 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~-  163 (233)
T 3s6j_A           88 HQIIALPGAVELLETLDKENLKWCIATSGGI--DTATINLKALKLDIN-KINIVTRDDVSYGKPDPDLFLAAAKKIGAP-  163 (233)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCCEEEECSSCH--HHHHHHHHTTTCCTT-SSCEECGGGSSCCTTSTHHHHHHHHHTTCC-
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEeCCch--hhHHHHHHhcchhhh-hheeeccccCCCCCCChHHHHHHHHHhCCC-
Confidence            3467899999999999999999999999753  335567889999877 5777776532         22223333211 


Q ss_pred             hhhcCCeEEEeecCcccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          ..+++.+|.+..+...++..|+
T Consensus       164 ----~~~~i~iGD~~~Di~~a~~aG~  185 (233)
T 3s6j_A          164 ----IDECLVIGDAIWDMLAARRCKA  185 (233)
T ss_dssp             ----GGGEEEEESSHHHHHHHHHTTC
T ss_pred             ----HHHEEEEeCCHHhHHHHHHCCC
Confidence                1356777765543334555555

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=96.17  E-value=0.0092  Score=52.00  Aligned_cols=54  Identities=24%  Similarity=0.279  Sum_probs=42.8

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|+.|++.|++++++||++.  ......++.+|+... |+.++++++
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~  145 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELGYELGIITDGNP--VKQWEKILRLELDDF-FEHVIISDF  145 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCEEEEEECSCH--HHHHHHHHHTTCGGG-CSEEEEGGG
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEECCCc--hhHHHHHHHcCcHhh-ccEEEEeCC
Confidence            346899999999999999999999999653  234567888998877 677776653

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=95.06  E-value=0.001  Score=60.33  Aligned_cols=56  Identities=18%  Similarity=0.291  Sum_probs=43.6

Q ss_pred             cceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccc
Q 019991           38 FGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAI   96 (332)
Q Consensus        38 DGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Ii   96 (332)
                      .|++....+++||+.++|+.|++.|++++++||+++..  ....++++|+... |..++
T Consensus       128 ~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~--~~~~~~~~gl~~~-f~~~~  183 (263)
T 2yj3_A          128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDK--VKELSKELNIQEY-YSNLS  183 (263)
Confidence            45555677899999999999999999999999976533  3455678898766 55554

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=96.02  E-value=0.0076  Score=51.19  Aligned_cols=104  Identities=19%  Similarity=0.265  Sum_probs=70.0

Q ss_pred             cCccEEEEeccceeecC------------------------------------------------CccCcCHHHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHDG------------------------------------------------KKPYPGAISTLEMLA   59 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g------------------------------------------------~~~ipGa~e~L~~L~   59 (332)
                      +++++|+||+||||+++                                                ..++||+.++++.|+
T Consensus         4 ~~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~   83 (205)
T 3m9l_A            4 SEIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELA   83 (205)
T ss_dssp             GGCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHH
T ss_pred             ccCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHH
Confidence            36899999999999963                                                156899999999999


Q ss_pred             HCCCeEEEEeCCCCChhHHHHHHHhCCCCcccc--ccccccHH--------HHHHHHhhcCChhhhhcCCeEEEeecCcc
Q 019991           60 TTGAKMVVISNSSRRASTTIDKLKSLGFDPSLF--AGAITSGE--------LTHQYLLRRDDAWFAALGRSCIHMTWSDR  129 (332)
Q Consensus        60 ~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f--~~Iits~~--------v~~~~L~~~~~~~~~~~G~~v~~~g~~~~  129 (332)
                      +.|++++++||++.  ......++.+|+... |  +.++++..        .....+++.+.+     ..+++.+|.+..
T Consensus        84 ~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~-----~~~~i~iGD~~~  155 (205)
T 3m9l_A           84 GRGYRLGILTRNAR--ELAHVTLEAIGLADC-FAEADVLGRDEAPPKPHPGGLLKLAEAWDVS-----PSRMVMVGDYRF  155 (205)
T ss_dssp             HTTCEEEEECSSCH--HHHHHHHHHTTCGGG-SCGGGEECTTTSCCTTSSHHHHHHHHHTTCC-----GGGEEEEESSHH
T ss_pred             hcCCeEEEEeCCch--HHHHHHHHHcCchhh-cCcceEEeCCCCCCCCCHHHHHHHHHHcCCC-----HHHEEEECCCHH
Confidence            99999999999764  234567888998766 6  55655432        222233333211     135677776544


Q ss_pred             cchhhhcCCc
Q 019991          130 GAISLEGLGL  139 (332)
Q Consensus       130 ~~~~l~~~g~  139 (332)
                      +....+..|+
T Consensus       156 Di~~a~~aG~  165 (205)
T 3m9l_A          156 DLDCGRAAGT  165 (205)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHcCC
Confidence            3334455554

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=95.98  E-value=0.0028  Score=59.83  Aligned_cols=48  Identities=17%  Similarity=0.313  Sum_probs=31.8

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh---CCCCcccccccccc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS---LGFDPSLFAGAITS   98 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~---lGl~~~~f~~Iits   98 (332)
                      ++|++.++++.|+++|+.++++|.++.   .+.+-+..   .|+.+++ ++|+.+
T Consensus       144 ~~~~~~~l~~~l~~~G~~v~ivSas~~---~~v~~~a~~~~~~ygIp~-e~ViG~  194 (327)
T 4as2_A          144 VFSGQRELYNKLMENGIEVYVISAAHE---ELVRMVAADPRYGYNAKP-ENVIGV  194 (327)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHTCGGGSCCCCG-GGEEEE
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhhcccccCCCH-HHeEee
Confidence            577888899999999999999997543   33444432   2445544 556554

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=95.98  E-value=0.0089  Score=51.16  Aligned_cols=53  Identities=25%  Similarity=0.391  Sum_probs=42.6

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++++.|++.|++++++||++.  ......++++|+... |+.++++.
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~  146 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGSR--HSIRQVVGNSGLTNS-FDHLISVD  146 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHHTCGGG-CSEEEEGG
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCCH--HHHHHHHHHCCChhh-cceeEehh
Confidence            457899999999999999999999999764  334566788898876 57776654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=95.96  E-value=0.0034  Score=60.54  Aligned_cols=56  Identities=18%  Similarity=0.222  Sum_probs=45.9

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccc--cccccHHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFA--GAITSGELT  102 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~--~Iits~~v~  102 (332)
                      ...++||+.++|+.|+++|++++++||+++.  .+...|+++|+... |+  .++++.++.
T Consensus       213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~--~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~  270 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYT--ETVVPFENLGLLPY-FEADFIATASDVL  270 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHTCGGG-SCGGGEECHHHHH
T ss_pred             CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHH--HHHHHHHHcCChHh-cCCCEEEeccccc
Confidence            3478999999999999999999999998643  34567888899877 67  788877664

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=95.92  E-value=0.0059  Score=53.51  Aligned_cols=54  Identities=24%  Similarity=0.328  Sum_probs=42.5

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|+++|++++++||+++  ......++++|+. . |+.++++.+
T Consensus       107 ~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~--~~~~~~l~~~~l~-~-f~~~~~~~~  160 (240)
T 2hi0_A          107 IKTGPFPGILDLMKNLRQKGVKLAVVSNKPN--EAVQVLVEELFPG-S-FDFALGEKS  160 (240)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHHSTT-T-CSEEEEECT
T ss_pred             hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHcCCc-c-eeEEEecCC
Confidence            3457899999999999999999999999754  2345677888887 6 677776653

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=95.87  E-value=0.0059  Score=52.74  Aligned_cols=53  Identities=25%  Similarity=0.301  Sum_probs=41.1

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ..++||+.++|+.|+++|++++++||++.   .....|+++|+... |+.++++.++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~---~~~~~l~~~gl~~~-f~~~~~~~~~  146 (220)
T 2zg6_A           94 AFLYDDTLEFLEGLKSNGYKLALVSNASP---RVKTLLEKFDLKKY-FDALALSYEI  146 (220)
T ss_dssp             EEECTTHHHHHHHHHTTTCEEEECCSCHH---HHHHHHHHHTCGGG-CSEEC-----
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhcCcHhH-eeEEEecccc
Confidence            36899999999999999999999999753   25677889999887 6888887654

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=95.86  E-value=0.0082  Score=51.83  Aligned_cols=85  Identities=13%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCChhhhhc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDDAWFAAL  117 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~~~~~~~  117 (332)
                      ++||+.++|+.|++.|++++++||+..  ......++.+|+... |+.++++..         .....+++.+.+     
T Consensus       105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-----  176 (237)
T 4ex6_A          105 LYPGVLEGLDRLSAAGFRLAMATSKVE--KAARAIAELTGLDTR-LTVIAGDDSVERGKPHPDMALHVARGLGIP-----  176 (237)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEECSSCH--HHHHHHHHHHTGGGT-CSEEECTTTSSSCTTSSHHHHHHHHHHTCC-----
T ss_pred             cCCCHHHHHHHHHhCCCcEEEEcCCCh--HHHHHHHHHcCchhh-eeeEEeCCCCCCCCCCHHHHHHHHHHcCCC-----
Confidence            789999999999999999999999764  234566778888776 577666543         222233332211     


Q ss_pred             CCeEEEeecCcccchhhhcCCc
Q 019991          118 GRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       118 G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      ..+++.+|.+..+...++..|+
T Consensus       177 ~~~~i~vGD~~~Di~~a~~aG~  198 (237)
T 4ex6_A          177 PERCVVIGDGVPDAEMGRAAGM  198 (237)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTC
T ss_pred             HHHeEEEcCCHHHHHHHHHCCC
Confidence            1357777765543334555665

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=95.82  E-value=0.009  Score=52.55  Aligned_cols=53  Identities=25%  Similarity=0.395  Sum_probs=41.8

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++|+.|++.|++++++||++..  .....++++|+... |+.++++.
T Consensus       112 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~--~~~~~l~~~gl~~~-f~~~~~~~  164 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQGYILAVVTNKPTK--HVQPILTAFGIDHL-FSEMLGGQ  164 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHTTCGGG-CSEEECTT
T ss_pred             cCccCCCHHHHHHHHHHCCCEEEEEECCcHH--HHHHHHHHcCchhe-EEEEEecc
Confidence            3578899999999999999999999997542  34567788998766 56666543

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=95.80  E-value=0.014  Score=50.35  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=35.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .++||+.++|+.|+++|++++++||+++.  .....++++|+..
T Consensus        86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~--~~~~~l~~~gl~~  127 (225)
T 1nnl_A           86 HLTPGIRELVSRLQERNVQVFLISGGFRS--IVEHVASKLNIPA  127 (225)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHH--HHHHHHHHTTCCG
T ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCChHH--HHHHHHHHcCCCc
Confidence            47899999999999999999999997642  3456778899974

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=95.65  E-value=0.021  Score=49.34  Aligned_cols=86  Identities=17%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccc--ccccccHHH---------HHHHHhhcCChh
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLF--AGAITSGEL---------THQYLLRRDDAW  113 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f--~~Iits~~v---------~~~~L~~~~~~~  113 (332)
                      ..++||+.++++.|++.|++++++||+++..  ....+++ |+... |  +.++++.++         ....+++.+.+ 
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~--~~~~l~~-~l~~~-f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-  181 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTS--LLDRLNH-NFPGI-FQANLMVTAFDVKYGKPNPEPYLMALKKGGFK-  181 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC-----CHHHHHH-HSTTT-CCGGGEECGGGCSSCTTSSHHHHHHHHHHTCC-
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHH--HHHHHHh-hHHHh-cCCCeEEecccCCCCCCCCHHHHHHHHHcCCC-
Confidence            4678999999999999999999999987532  2345666 88766 6  566666532         22222222211 


Q ss_pred             hhhcCCeEEEeecCcccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          ..+++.+|.+..+....+..|+
T Consensus       182 ----~~~~i~vGD~~~Di~~a~~aG~  203 (247)
T 3dv9_A          182 ----PNEALVIENAPLGVQAGVAAGI  203 (247)
T ss_dssp             ----GGGEEEEECSHHHHHHHHHTTS
T ss_pred             ----hhheEEEeCCHHHHHHHHHCCC
Confidence                1356777765443334555554

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=95.62  E-value=0.012  Score=50.36  Aligned_cols=89  Identities=16%  Similarity=0.107  Sum_probs=58.6

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCChh
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDDAW  113 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~~~  113 (332)
                      ....++||+.++++.|++.|++++++||+++  ......++.+|+... |+.++++..         .....+++.+.+ 
T Consensus        83 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  158 (226)
T 3mc1_A           83 FENKVYDGIEALLSSLKDYGFHLVVATSKPT--VFSKQILEHFKLAFY-FDAIVGSSLDGKLSTKEDVIRYAMESLNIK-  158 (226)
T ss_dssp             GSCCBCTTHHHHHHHHHHHTCEEEEEEEEEH--HHHHHHHHHTTCGGG-CSEEEEECTTSSSCSHHHHHHHHHHHHTCC-
T ss_pred             ccCccCcCHHHHHHHHHHCCCeEEEEeCCCH--HHHHHHHHHhCCHhh-eeeeeccCCCCCCCCCHHHHHHHHHHhCcC-
Confidence            3457899999999999999999999999753  335567888999876 566665432         222233333221 


Q ss_pred             hhhcCCeEEEeecCcccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          ..+++.+|.+..+...++..|+
T Consensus       159 ----~~~~i~iGD~~~Di~~a~~aG~  180 (226)
T 3mc1_A          159 ----SDDAIMIGDREYDVIGALKNNL  180 (226)
T ss_dssp             ----GGGEEEEESSHHHHHHHHTTTC
T ss_pred             ----cccEEEECCCHHHHHHHHHCCC
Confidence                1367777765543334555565

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=95.46  E-value=0.0089  Score=50.34  Aligned_cols=55  Identities=16%  Similarity=0.297  Sum_probs=42.1

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .....++||+.++|+.|++.| +++++||+++.  .....++.+|+... |+.++++.+
T Consensus        82 ~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~--~~~~~l~~~~~~~~-f~~~~~~~~  136 (200)
T 3cnh_A           82 EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRD--LNEYRIRTFGLGEF-LLAFFTSSA  136 (200)
T ss_dssp             HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHH--HHHHHHHHHTGGGT-CSCEEEHHH
T ss_pred             HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHH--HHHHHHHhCCHHHh-cceEEeecc
Confidence            345568999999999999999 99999997642  34456777888776 577776554

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=95.41  E-value=0.047  Score=45.15  Aligned_cols=49  Identities=18%  Similarity=0.373  Sum_probs=39.7

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ++||+.++++.|++.|++++++||++.   .....++++|+... |+.++++.
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~l~~~~~~~~-f~~~~~~~  131 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRND---QVLEILEKTSIAAY-FTEVVTSS  131 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCT---HHHHHHHHTTCGGG-EEEEECGG
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcH---HHHHHHHHcCCHhh-eeeeeecc
Confidence            679999999999999999999999753   34567888998876 56676654

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=95.37  E-value=0.0083  Score=52.81  Aligned_cols=54  Identities=24%  Similarity=0.229  Sum_probs=42.4

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccc-ccccHHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAG-AITSGEL  101 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~-Iits~~v  101 (332)
                      ..++||+.++++.|++.|++++++||++.  ......++.+|+... |+. ++++.+.
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~i~~~~~~  163 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSER--GRLHLKLRVAGLTEL-AGEHIYDPSWV  163 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCH--HHHHHHHHHTTCHHH-HCSCEECGGGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCH--HHHHHHHHhcChHhh-ccceEEeHhhc
Confidence            46799999999999999999999999764  234567888998766 566 6666443

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=95.33  E-value=0.031  Score=47.82  Aligned_cols=88  Identities=25%  Similarity=0.271  Sum_probs=57.7

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCChh
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDDAW  113 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~~~  113 (332)
                      ....++||+.++++.|+ .|++++++||+++  ......++.+|+... |+.++++..         .....+++.+.+ 
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-  178 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFR--ELQSRKMRSAGVDRY-FKKIILSEDLGVLKPRPEIFHFALSATQSE-  178 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TTSEEEEEECSCH--HHHHHHHHHHTCGGG-CSEEEEGGGTTCCTTSHHHHHHHHHHTTCC-
T ss_pred             hcCCcCccHHHHHHHHH-cCCeEEEEeCCch--HHHHHHHHHcChHhh-ceeEEEeccCCCCCCCHHHHHHHHHHcCCC-
Confidence            44678999999999999 9999999999753  234567788898876 577766543         222223333211 


Q ss_pred             hhhcCCeEEEeecCc-ccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                          ..+++.+|.+. .+....+..|+
T Consensus       179 ----~~~~~~iGD~~~~Di~~a~~aG~  201 (240)
T 3qnm_A          179 ----LRESLMIGDSWEADITGAHGVGM  201 (240)
T ss_dssp             ----GGGEEEEESCTTTTHHHHHHTTC
T ss_pred             ----cccEEEECCCchHhHHHHHHcCC
Confidence                13677777763 44445556665

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=95.29  E-value=0.027  Score=48.91  Aligned_cols=86  Identities=16%  Similarity=0.234  Sum_probs=54.6

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccc--ccccccHHH---------HHHHHhhcCChh
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLF--AGAITSGEL---------THQYLLRRDDAW  113 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f--~~Iits~~v---------~~~~L~~~~~~~  113 (332)
                      ..++||+.++++.|++.|++++++||+++.  .....++. |+... |  +.++++.++         ....+++.+.+ 
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~--~~~~~l~~-~l~~~-f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~-  182 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQL--SLLERLEH-NFPGM-FHKELMVTAFDVKYGKPNPEPYLMALKKGGLK-  182 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCH--HHHTTHHH-HSTTT-CCGGGEECTTTCSSCTTSSHHHHHHHHHTTCC-
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHH--HHHHHHHH-hHHHh-cCcceEEeHHhCCCCCCChHHHHHHHHHcCCC-
Confidence            357899999999999999999999998653  23455667 88766 6  556665432         22223332211 


Q ss_pred             hhhcCCeEEEeecCcccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          ..+++.+|.+..+....+..|+
T Consensus       183 ----~~~~i~vGD~~~Di~~a~~aG~  204 (243)
T 3qxg_A          183 ----ADEAVVIENAPLGVEAGHKAGI  204 (243)
T ss_dssp             ----GGGEEEEECSHHHHHHHHHTTC
T ss_pred             ----HHHeEEEeCCHHHHHHHHHCCC
Confidence                1356777765443334555554

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=95.29  E-value=0.015  Score=50.39  Aligned_cols=51  Identities=24%  Similarity=0.252  Sum_probs=41.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      .++||+.++|+.|++.|++++++||+++  ......++.+|+... |+.++++.
T Consensus       110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~  160 (240)
T 3sd7_A          110 KIYENMKEILEMLYKNGKILLVATSKPT--VFAETILRYFDIDRY-FKYIAGSN  160 (240)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHTTCGGG-CSEEEEEC
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCcH--HHHHHHHHHcCcHhh-EEEEEecc
Confidence            5899999999999999999999999643  335567888999876 56666554

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=95.25  E-value=0.013  Score=50.31  Aligned_cols=53  Identities=19%  Similarity=0.286  Sum_probs=43.5

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ...++||+.++++.|++.|++++++||++.  ......++++|+... |+.++++.
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~  149 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNP--QMLEIAVKSAGMSGL-FDHVLSVD  149 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCH--HHHHHHHHTTTCTTT-CSEEEEGG
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCH--HHHHHHHHHCCcHhh-cCEEEEec
Confidence            457899999999999999999999999764  234567889999877 67777764

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=95.22  E-value=0.014  Score=54.52  Aligned_cols=49  Identities=20%  Similarity=0.256  Sum_probs=39.2

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccc
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGA   95 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~I   95 (332)
                      ...++||+.++|++|+++|++++++||+.+  ......++++|+... |+.+
T Consensus       177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~--~~~~~~l~~lgl~~~-f~~~  225 (317)
T 4eze_A          177 RMTLSPGLLTILPVIKAKGFKTAIISGGLD--IFTQRLKARYQLDYA-FSNT  225 (317)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHHTCSEE-EEEC
T ss_pred             CCEECcCHHHHHHHHHhCCCEEEEEeCccH--HHHHHHHHHcCCCeE-EEEE
Confidence            457899999999999999999999999754  234566788899765 4544

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=95.18  E-value=0.01  Score=52.27  Aligned_cols=57  Identities=18%  Similarity=0.054  Sum_probs=44.5

Q ss_pred             CccEEEEeccceeecCC---------ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           29 RFKAWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~---------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      +..++++|+|+||.+..         ..-||+.+||+++. .++.+++.|++++..  ....++.++..
T Consensus        33 ~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~y--a~~vl~~LDp~   98 (204)
T 3qle_A           33 RPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMY--SDKIAEKLDPI   98 (204)
T ss_dssp             CSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCHHH--HHHHHHHTSTT
T ss_pred             CCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHH--HHHHHHHhCCC
Confidence            56799999999999863         56899999999998 789999999876532  22344556544

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.06  E-value=0.03  Score=47.49  Aligned_cols=87  Identities=23%  Similarity=0.185  Sum_probs=56.8

Q ss_pred             CccCcCHHHHHHHHHHCC-CeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH----HHHHHHHhhcCChhhhhcCC
Q 019991           45 KKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG----ELTHQYLLRRDDAWFAALGR  119 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G-~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~----~v~~~~L~~~~~~~~~~~G~  119 (332)
                      ..++||+.++++.|++.| ++++++||++.  ......++.+|+... |+.+++++    ......+++.+.+     ..
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~--~~~~~~l~~~~~~~~-f~~~~~~~kpk~~~~~~~~~~lgi~-----~~  175 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDL--LDQENKLERSGLSPY-FDHIEVMSDKTEKEYLRLLSILQIA-----PS  175 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCH--HHHHHHHHHHTCGGG-CSEEEEESCCSHHHHHHHHHHHTCC-----GG
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCch--HHHHHHHHHhCcHhh-hheeeecCCCCHHHHHHHHHHhCCC-----cc
Confidence            468999999999999999 99999998653  234567788888776 57776632    3333333333221     13


Q ss_pred             eEEEeecCc-ccchhhhcCCc
Q 019991          120 SCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       120 ~v~~~g~~~-~~~~~l~~~g~  139 (332)
                      +++.+|.+. .+....+..|+
T Consensus       176 ~~i~iGD~~~~Di~~a~~aG~  196 (234)
T 3ddh_A          176 ELLMVGNSFKSDIQPVLSLGG  196 (234)
T ss_dssp             GEEEEESCCCCCCHHHHHHTC
T ss_pred             eEEEECCCcHHHhHHHHHCCC
Confidence            577777663 43334455554

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=95.01  E-value=0.0048  Score=52.13  Aligned_cols=52  Identities=21%  Similarity=0.207  Sum_probs=35.3

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh-CCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS-LGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~-lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|+.|++.|++++++||+++....  ..++. +|+... |+.++++.+
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~--~~~~~~~~l~~~-f~~~~~~~~  143 (206)
T 2b0c_A           91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT--FWPEEYPEIRDA-ADHIYLSQD  143 (206)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCTTS--CCGGGCHHHHHH-CSEEEEHHH
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEECCChHHHH--HHHHhccChhhh-eeeEEEecc
Confidence            46899999999999999999999998753211  11222 344444 466666554

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=94.97  E-value=0.1  Score=44.25  Aligned_cols=89  Identities=17%  Similarity=0.132  Sum_probs=57.4

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCCccccccccccHHHH---------HHHHhhcCChhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELT---------HQYLLRRDDAWFA  115 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~~~~f~~Iits~~v~---------~~~L~~~~~~~~~  115 (332)
                      .++||+.++++.|++.|++++++||+.. ........++.+|+... |+.++++.+..         ...+++.+.+   
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~---  174 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF-IDKTFFADEVLSYKPRKEMFEKVLNSFEVK---  174 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-CSEEEEHHHHTCCTTCHHHHHHHHHHTTCC---
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-hhhheeccccCCCCCCHHHHHHHHHHcCCC---
Confidence            4689999999999999999999999862 13334567788999877 67777765432         1122222211   


Q ss_pred             hcCCeEEEeecCc-ccchhhhcCCcc
Q 019991          116 ALGRSCIHMTWSD-RGAISLEGLGLK  140 (332)
Q Consensus       116 ~~G~~v~~~g~~~-~~~~~l~~~g~~  140 (332)
                        ..+++.+|.+. .+...++..|+.
T Consensus       175 --~~~~~~iGD~~~nDi~~a~~aG~~  198 (235)
T 2om6_A          175 --PEESLHIGDTYAEDYQGARKVGMW  198 (235)
T ss_dssp             --GGGEEEEESCTTTTHHHHHHTTSE
T ss_pred             --ccceEEECCChHHHHHHHHHCCCE
Confidence              13577777665 333445556653

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=94.83  E-value=0.015  Score=52.32  Aligned_cols=52  Identities=12%  Similarity=0.097  Sum_probs=40.6

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh---CCCCcccccccccc
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS---LGFDPSLFAGAITS   98 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~---lGl~~~~f~~Iits   98 (332)
                      ...++||+.++|+.|+++|++++++||+++..  ....|+.   .|+... |+.++++
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~--~~~~l~~~~~~~l~~~-fd~i~~~  182 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEA--QKLLFGHSTEGDILEL-VDGHFDT  182 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHH--HHHHHHTBTTBCCGGG-CSEEECG
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHH--HHHHHHhhcccChHhh-ccEEEec
Confidence            45789999999999999999999999987532  3345564   457776 6777776

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=94.78  E-value=0.019  Score=55.04  Aligned_cols=60  Identities=8%  Similarity=0.148  Sum_probs=45.3

Q ss_pred             HHHHhhhcCccEEEEeccceeecCC-----------------------------------------ccCcCHHHHHHHHH
Q 019991           21 LRHIAETRRFKAWLLDQFGVLHDGK-----------------------------------------KPYPGAISTLEMLA   59 (332)
Q Consensus        21 ~~~~~~~~~~~~vlfDlDGvL~~g~-----------------------------------------~~ipGa~e~L~~L~   59 (332)
                      ..-++. ++..+++||+||||+++.                                         ...||+.+||+.+.
T Consensus        10 ~~rl~~-~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~   88 (372)
T 3ef0_A           10 VKRLRQ-EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS   88 (372)
T ss_dssp             HHHHHH-HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH
T ss_pred             HHHHHh-CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh
Confidence            344444 478899999999999982                                         12699999999998


Q ss_pred             HCCCeEEEEeCCCCCh-hHHHHHH
Q 019991           60 TTGAKMVVISNSSRRA-STTIDKL   82 (332)
Q Consensus        60 ~~G~~v~~vTN~s~~~-~~~~~~L   82 (332)
                       .++.+++.|++++.. ..+.+.|
T Consensus        89 -~~yeivI~Tas~~~yA~~vl~~L  111 (372)
T 3ef0_A           89 -ELYELHIYTMGTKAYAKEVAKII  111 (372)
T ss_dssp             -TTEEEEEECSSCHHHHHHHHHHH
T ss_pred             -cCcEEEEEeCCcHHHHHHHHHHh
Confidence             789999999987543 3444444

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=94.76  E-value=0.053  Score=45.74  Aligned_cols=87  Identities=14%  Similarity=0.173  Sum_probs=54.6

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH---------HHHHHHHhhcCChhhh
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG---------ELTHQYLLRRDDAWFA  115 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~---------~v~~~~L~~~~~~~~~  115 (332)
                      ..++||+.++++.|++.|++++++||++..  .....++.+|+... |+.++++.         ......+++.+.+   
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~--~~~~~l~~~~~~~~-~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~---  166 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLH--MLEKVLTMFDLRDS-FDALASAEKLPYSKPHPQVYLDCAAKLGVD---  166 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHTTCGGG-CSEEEECTTSSCCTTSTHHHHHHHHHHTSC---
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHH--HHHHHHHhcCcHhh-CcEEEeccccCCCCCChHHHHHHHHHcCCC---
Confidence            356899999999999999999999997532  34456778888766 46665543         2222333333211   


Q ss_pred             hcCCeEEEeecCcccchhhhcCCc
Q 019991          116 ALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       116 ~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                        ..+++.+|.+..+...++..|+
T Consensus       167 --~~~~i~iGD~~nDi~~a~~aG~  188 (226)
T 1te2_A          167 --PLTCVALEDSVNGMIASKAARM  188 (226)
T ss_dssp             --GGGEEEEESSHHHHHHHHHTTC
T ss_pred             --HHHeEEEeCCHHHHHHHHHcCC
Confidence              1356777765443334455554

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=94.72  E-value=0.082  Score=45.11  Aligned_cols=87  Identities=17%  Similarity=0.178  Sum_probs=57.1

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH---------HHHHHhhcC-Chh
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL---------THQYLLRRD-DAW  113 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v---------~~~~L~~~~-~~~  113 (332)
                      ...++||+.++++.|++. ++++++||+++  ......++.+|+... |+.++++...         ....+++.+ .+ 
T Consensus       101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~--~~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~-  175 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVS--HTQYKRLRDSGLFPF-FKDIFVSEDTGFQKPMKEYFNYVFERIPQFS-  175 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEECSCH--HHHHHHHHHTTCGGG-CSEEEEGGGTTSCTTCHHHHHHHHHTSTTCC-
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCCH--HHHHHHHHHcChHhh-hheEEEecccCCCCCChHHHHHHHHHcCCCC-
Confidence            346899999999999999 99999999764  334567888999877 5777665432         222233332 11 


Q ss_pred             hhhcCCeEEEeecCc-ccchhhhcCCc
Q 019991          114 FAALGRSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       114 ~~~~G~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                          ..+++.+|.+. .+....+..|+
T Consensus       176 ----~~~~i~vGD~~~~Di~~a~~aG~  198 (238)
T 3ed5_A          176 ----AEHTLIIGDSLTADIKGGQLAGL  198 (238)
T ss_dssp             ----GGGEEEEESCTTTTHHHHHHTTC
T ss_pred             ----hhHeEEECCCcHHHHHHHHHCCC
Confidence                13577777664 34444555665

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=94.62  E-value=0.043  Score=49.03  Aligned_cols=52  Identities=25%  Similarity=0.272  Sum_probs=41.5

Q ss_pred             CCccCcCHHHHHHHHHHCCC--eEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           44 GKKPYPGAISTLEMLATTGA--KMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~--~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      ...++||+.++|+.|++.|+  +++++||+++.  .....++.+|+... |+.++++
T Consensus       140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~--~~~~~l~~~gl~~~-fd~v~~~  193 (282)
T 3nuq_A          140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN--HAIRCLRLLGIADL-FDGLTYC  193 (282)
T ss_dssp             TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHH--HHHHHHHHHTCTTS-CSEEECC
T ss_pred             ccCcChhHHHHHHHHHhCCCCceEEEEECCChH--HHHHHHHhCCcccc-cceEEEe
Confidence            35689999999999999999  99999997642  34566788899876 5776654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=94.47  E-value=0.029  Score=48.97  Aligned_cols=51  Identities=18%  Similarity=0.157  Sum_probs=36.3

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh-CCCCccccccccccH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS-LGFDPSLFAGAITSG   99 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~-lGl~~~~f~~Iits~   99 (332)
                      .++||+.++|+.|++.|++++++||+++.  .+...+.+ .|+... |+.++++.
T Consensus       112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~--~~~~~l~~~~~l~~~-f~~~~~~~  163 (250)
T 3l5k_A          112 ALMPGAEKLIIHLRKHGIPFALATSSRSA--SFDMKTSRHKEFFSL-FSHIVLGD  163 (250)
T ss_dssp             CBCTTHHHHHHHHHHTTCCEEEECSCCHH--HHHHHTTTCHHHHTT-SSCEECTT
T ss_pred             CCCCCHHHHHHHHHhCCCcEEEEeCCCHH--HHHHHHHhccCHHhh-eeeEEecc
Confidence            58999999999999999999999998642  22333433 355544 45566554

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=94.47  E-value=0.031  Score=47.29  Aligned_cols=86  Identities=17%  Similarity=0.164  Sum_probs=53.6

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccc-ccccccHH------------HHHHHHhhcCC
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLF-AGAITSGE------------LTHQYLLRRDD  111 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f-~~Iits~~------------v~~~~L~~~~~  111 (332)
                      ..++||+.++++.|++. ++++++||+++  ......++++|+... | +.++++.+            .....+++.+ 
T Consensus        68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~--~~~~~~l~~~gl~~~-f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~-  142 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRER-FQVVILSDTFY--EFSQPLMRQLGFPTL-LCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK-  142 (206)
T ss_dssp             CCCCTTHHHHHHHHHTT-SEEEEEEEEEH--HHHHHHHHHTTCCCE-EEEEEEECTTSCEEEEECCSSSHHHHHHHHHH-
T ss_pred             cCCCccHHHHHHHHHhc-CcEEEEECChH--HHHHHHHHHcCCcce-ecceeEEcCCceEEeeecCCCchHHHHHHHHH-
Confidence            35799999999999999 99999999753  234567788999865 4 23433221            1222222221 


Q ss_pred             hhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          112 AWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       112 ~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                          .-+.+++.+|.+..+....+..|+
T Consensus       143 ----~~~~~~~~iGD~~~Di~~a~~aG~  166 (206)
T 1rku_A          143 ----SLYYRVIAAGDSYNDTTMLSEAHA  166 (206)
T ss_dssp             ----HTTCEEEEEECSSTTHHHHHHSSE
T ss_pred             ----hcCCEEEEEeCChhhHHHHHhcCc
Confidence                113567777865544444555665

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=94.43  E-value=0.051  Score=45.86  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=39.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..++||+.++++.|++.|++++++||+ .   .....++++|+... |+.++++.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~---~~~~~l~~~~l~~~-f~~~~~~~  139 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS-K---NGPFLLERMNLTGY-FDAIADPA  139 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-T---THHHHHHHTTCGGG-CSEECCTT
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc-H---HHHHHHHHcChHHH-cceEeccc
Confidence            467899999999999999999999998 2   23456778888766 56666654

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=94.40  E-value=0.057  Score=47.14  Aligned_cols=88  Identities=13%  Similarity=0.093  Sum_probs=57.4

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH----HHHHHHHhhcCChhhhhcC
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG----ELTHQYLLRRDDAWFAALG  118 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~----~v~~~~L~~~~~~~~~~~G  118 (332)
                      ....++||+.++|+.|+ .|++++++||+++.  .....++.+|+... |+.+++++    +.....+++.+.+     -
T Consensus       109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~--~~~~~l~~~~l~~~-f~~i~~~~kp~~~~~~~~~~~l~~~-----~  179 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDLF--HQEQKIEQSGLSDL-FPRIEVVSEKDPQTYARVLSEFDLP-----A  179 (251)
T ss_dssp             CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHH--HHHHHHHHHSGGGT-CCCEEEESCCSHHHHHHHHHHHTCC-----G
T ss_pred             ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHH--HHHHHHHHcCcHHh-CceeeeeCCCCHHHHHHHHHHhCcC-----c
Confidence            45578999999999999 99999999997642  34566788888776 57666543    2233333333221     1


Q ss_pred             CeEEEeecCc-ccchhhhcCCc
Q 019991          119 RSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       119 ~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                      .+++.+|.+. .+....+..|+
T Consensus       180 ~~~i~iGD~~~~Di~~a~~aG~  201 (251)
T 2pke_A          180 ERFVMIGNSLRSDVEPVLAIGG  201 (251)
T ss_dssp             GGEEEEESCCCCCCHHHHHTTC
T ss_pred             hhEEEECCCchhhHHHHHHCCC
Confidence            4677778765 44444555565

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=94.26  E-value=0.051  Score=44.93  Aligned_cols=90  Identities=17%  Similarity=0.153  Sum_probs=56.4

Q ss_pred             eecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH---------HHHHHHhhcCC
Q 019991           41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE---------LTHQYLLRRDD  111 (332)
Q Consensus        41 L~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~---------v~~~~L~~~~~  111 (332)
                      +.....++||+.++++.|++.|++++++||+....  .. .++.+|+... |+.++++.+         .....+++.+.
T Consensus        80 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--~~-~~~~~~~~~~-f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i  155 (207)
T 2go7_A           80 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNA--FT-ILKDLGVESY-FTEILTSQSGFVRKPSPEAATYLLDKYQL  155 (207)
T ss_dssp             CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHH--HH-HHHHHTCGGG-EEEEECGGGCCCCTTSSHHHHHHHHHHTC
T ss_pred             ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHH--HH-HHHHcCchhh-eeeEEecCcCCCCCCCcHHHHHHHHHhCC
Confidence            34556789999999999999999999999976532  33 5677788765 466655432         22222333221


Q ss_pred             hhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          112 AWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       112 ~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      +     ..+++.+|.+..+...++..|+
T Consensus       156 ~-----~~~~~~iGD~~nDi~~~~~aG~  178 (207)
T 2go7_A          156 N-----SDNTYYIGDRTLDVEFAQNSGI  178 (207)
T ss_dssp             C-----GGGEEEEESSHHHHHHHHHHTC
T ss_pred             C-----cccEEEECCCHHHHHHHHHCCC
Confidence            1     1356777765433334455555

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=94.24  E-value=0.023  Score=48.11  Aligned_cols=51  Identities=12%  Similarity=0.127  Sum_probs=38.0

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHh------CCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS------LGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~------lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|+.|++ |++++++||++..  .....++.      +|+... |+.++++.+
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~--~~~~~~~~l~~~~~~~l~~~-f~~~~~~~~  145 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTNPY--VLDLAMSPRFLPSGRTLDSF-FDKVYASCQ  145 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCCHH--HHHHHTSTTSSTTCCCGGGG-SSEEEEHHH
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCCHH--HHHHHHhhhccccccCHHHH-cCeEEeecc
Confidence            457999999999999 9999999997542  23344556      688766 577777654

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=94.21  E-value=0.027  Score=48.95  Aligned_cols=47  Identities=26%  Similarity=0.432  Sum_probs=36.9

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGA   95 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~I   95 (332)
                      ..++||+.++|+.|+++| +++++||+++..  ....|+++|+... |+.+
T Consensus        95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~--~~~~l~~~gl~~~-f~~~  141 (231)
T 2p11_A           95 SRVYPGALNALRHLGARG-PTVILSDGDVVF--QPRKIARSGLWDE-VEGR  141 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTS-CEEEEEECCSSH--HHHHHHHTTHHHH-TTTC
T ss_pred             CCcCccHHHHHHHHHhCC-CEEEEeCCCHHH--HHHHHHHcCcHHh-cCee
Confidence            367899999999999999 999999987643  4466788888654 4443

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=94.20  E-value=0.02  Score=48.53  Aligned_cols=53  Identities=23%  Similarity=0.368  Sum_probs=41.7

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ....++||+.++|+.|++. ++++++||+++  ......++++|+... |+.++++.
T Consensus        80 ~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~--~~~~~~l~~~~l~~~-f~~~~~~~  132 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPSE-LRLGIVTSQRR--NELESGMRSYPFMMR-MAVTISAD  132 (209)
T ss_dssp             GGCEECTTHHHHHHHSCTT-SEEEEECSSCH--HHHHHHHTTSGGGGG-EEEEECGG
T ss_pred             ccCCcCCCHHHHHHHHHhc-CcEEEEeCCCH--HHHHHHHHHcChHhh-ccEEEecC
Confidence            4567899999999999999 99999999753  234567788888766 57776654

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=94.07  E-value=0.09  Score=44.80  Aligned_cols=85  Identities=20%  Similarity=0.280  Sum_probs=56.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH---------HHHHhhcCChhhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT---------HQYLLRRDDAWFAA  116 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~---------~~~L~~~~~~~~~~  116 (332)
                      .++||+.++++.|++. ++++++||++.  ......++.+|+... |+.++++....         ...+++.+.+    
T Consensus       100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~--~~~~~~l~~~~~~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~----  171 (234)
T 3u26_A          100 ELYPEVVEVLKSLKGK-YHVGMITDSDT--EQAMAFLDALGIKDL-FDSITTSEEAGFFKPHPRIFELALKKAGVK----  171 (234)
T ss_dssp             CBCTTHHHHHHHHTTT-SEEEEEESSCH--HHHHHHHHHTTCGGG-CSEEEEHHHHTBCTTSHHHHHHHHHHHTCC----
T ss_pred             CcCcCHHHHHHHHHhC-CcEEEEECCCH--HHHHHHHHHcCcHHH-cceeEeccccCCCCcCHHHHHHHHHHcCCC----
Confidence            5899999999999999 99999999764  234567888999877 67777765421         1122222211    


Q ss_pred             cCCeEEEeecCc-ccchhhhcCCc
Q 019991          117 LGRSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       117 ~G~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                       ..+++.+|.+. .+....+..|+
T Consensus       172 -~~~~~~vGD~~~~Di~~a~~aG~  194 (234)
T 3u26_A          172 -GEEAVYVGDNPVKDCGGSKNLGM  194 (234)
T ss_dssp             -GGGEEEEESCTTTTHHHHHTTTC
T ss_pred             -chhEEEEcCCcHHHHHHHHHcCC
Confidence             14577778764 33444556664

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=94.01  E-value=0.017  Score=55.68  Aligned_cols=53  Identities=17%  Similarity=0.155  Sum_probs=37.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCC---C-ChhHHHHHHHhCCCCccccccccccHHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSS---R-RASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s---~-~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .++||+.++|+.|+++|++++++||+.   . ....+...+.  |+... |+.++++.++
T Consensus       100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~-fd~i~~~~~~  156 (555)
T 3i28_A          100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMH-FDFLIESCQV  156 (555)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTT-SSEEEEHHHH
T ss_pred             CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhh-eeEEEecccc
Confidence            689999999999999999999999982   2 1222222222  55555 6788887654

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=93.93  E-value=0.046  Score=47.06  Aligned_cols=42  Identities=10%  Similarity=0.116  Sum_probs=34.7

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .++||+.++|+.|+++|++++++||+++.  .....++.+|+..
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~--~~~~~~~~~g~~~  133 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSF--VTAPIARAFGVQH  133 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHTTCCE
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHH--HHHHHHHHcCCCE
Confidence            56999999999999999999999997642  2446678889864

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=93.88  E-value=0.066  Score=45.51  Aligned_cols=46  Identities=11%  Similarity=0.224  Sum_probs=34.4

Q ss_pred             ecCCccCcCHHHHHHHHHHC-CCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           42 HDGKKPYPGAISTLEMLATT-GAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~-G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .....++||+.++|+.|++. |++++++||+++...  ...++++|+..
T Consensus        71 ~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~--~~~l~~~~l~~  117 (197)
T 1q92_A           71 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFK--YCPYEKYAWVE  117 (197)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCS--SHHHHHHHHHH
T ss_pred             hhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchH--HHHHHHhchHH
Confidence            34567999999999999999 999999999886321  12345555543

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=93.88  E-value=0.11  Score=44.31  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=54.0

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH---------HHHHHhhcCChhh
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL---------THQYLLRRDDAWF  114 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v---------~~~~L~~~~~~~~  114 (332)
                      ...++||+.++++.|++. ++++++||++..       ++.+|+... |+.++++...         ....+++.+.+  
T Consensus       103 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-------l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--  171 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT-FTLGVITNGNAD-------VRRLGLADY-FAFALCAEDLGIGKPDPAPFLEALRRAKVD--  171 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-------GGGSTTGGG-CSEEEEHHHHTCCTTSHHHHHHHHHHHTCC--
T ss_pred             cCccCcCHHHHHHHHHhC-CeEEEEECCchh-------hhhcCcHHH-eeeeEEccccCCCCcCHHHHHHHHHHhCCC--
Confidence            456899999999999998 999999998754       567888876 6777776542         12222222211  


Q ss_pred             hhcCCeEEEeecCc-ccchhhhcCCc
Q 019991          115 AALGRSCIHMTWSD-RGAISLEGLGL  139 (332)
Q Consensus       115 ~~~G~~v~~~g~~~-~~~~~l~~~g~  139 (332)
                         ..+++.+|.+. .+....+..|+
T Consensus       172 ---~~~~~~vGD~~~~Di~~a~~aG~  194 (230)
T 3vay_A          172 ---ASAAVHVGDHPSDDIAGAQQAGM  194 (230)
T ss_dssp             ---GGGEEEEESCTTTTHHHHHHTTC
T ss_pred             ---chheEEEeCChHHHHHHHHHCCC
Confidence               13577777664 33444555665

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=93.81  E-value=0.068  Score=46.87  Aligned_cols=53  Identities=13%  Similarity=0.030  Sum_probs=37.4

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..++||+.++++.|++.|++++++||++..  .....++.+|+....|+.++++.
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~--~~~~~l~~~~~~~~~~~~~~~~~  162 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPG--MMAPALIAAKEQGYTPASTVFAT  162 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHHHTTCCCSEEECGG
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchH--HHHHHHHhcCcccCCCceEecHH
Confidence            378999999999999999999999997642  23345555555443134555543

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=93.77  E-value=0.084  Score=44.43  Aligned_cols=54  Identities=22%  Similarity=0.255  Sum_probs=41.3

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ....++||+.++++.|++.|++++++||++.  ......++.+|+... |+.++++.
T Consensus        86 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~~~~~~~~~~-~~~~~~~~  139 (225)
T 3d6j_A           86 ANTILFPDTLPTLTHLKKQGIRIGIISTKYR--FRILSFLRNHMPDDW-FDIIIGGE  139 (225)
T ss_dssp             GGCEECTTHHHHHHHHHHHTCEEEEECSSCH--HHHHHHHHTSSCTTC-CSEEECGG
T ss_pred             ccCccCcCHHHHHHHHHHCCCeEEEEECCCH--HHHHHHHHHcCchhh-eeeeeehh
Confidence            3456789999999999999999999999753  234566788898766 56666543

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=93.77  E-value=0.0079  Score=56.08  Aligned_cols=36  Identities=14%  Similarity=-0.048  Sum_probs=28.8

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEe
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS   69 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vT   69 (332)
                      .+++|+||+||||.++...     +++.++...|..+.++|
T Consensus        20 ~~kli~fDlDGTLld~~~~-----~~l~~~~~~g~~~~~~t   55 (332)
T 1y8a_A           20 QGHMFFTDWEGPWILTDFA-----LELCMAVFNNARFFSNL   55 (332)
T ss_dssp             CCCEEEECSBTTTBCCCHH-----HHHHHHHHCCHHHHHHH
T ss_pred             CceEEEEECcCCCcCccHH-----HHHHHHHHCCCEEEEEc
Confidence            5899999999999998763     67777777776666655

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=93.66  E-value=0.07  Score=51.18  Aligned_cols=43  Identities=30%  Similarity=0.274  Sum_probs=35.2

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++||+.++++.|++.|++++++||+.+.  .....++++|+...
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~--~~~~~~~~lgl~~~  298 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRR--IIEPLAEELMLDYV  298 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHH--HHHHHHHHTTCSEE
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHH--HHHHHHHHcCccce
Confidence            57899999999999999999999997542  34456788999754

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=93.56  E-value=0.028  Score=48.54  Aligned_cols=53  Identities=13%  Similarity=0.059  Sum_probs=39.8

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCCh-hHHHHHH---HhCCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKL---KSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~-~~~~~~L---~~lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|+.|++. ++++++||++... +.+.+.|   +.+|+... |+.++++.+
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-fd~i~~~~~  168 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-FEKTYLSYE  168 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-CSEEEEHHH
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-CCEEEeecc
Confidence            3579999999999998 9999999987532 2333555   77888766 677777654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=93.13  E-value=0.059  Score=45.99  Aligned_cols=52  Identities=17%  Similarity=0.177  Sum_probs=40.4

Q ss_pred             CCccCcCHHHHHHHHHHC-CCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           44 GKKPYPGAISTLEMLATT-GAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~-G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      ...++||+.++|+.|++. |++++++||+++.  .....++.+|+... |+.++++
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~--~~~~~l~~~~l~~~-f~~~~~~  143 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEA--SGRHKLKLPGIDHY-FPFGAFA  143 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHH--HHHHHHHTTTCSTT-CSCEECT
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHH--HHHHHHHHCCchhh-cCcceec
Confidence            446799999999999999 9999999997642  34467888998876 5554443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=92.88  E-value=0.00051  Score=60.05  Aligned_cols=109  Identities=9%  Similarity=-0.062  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-hcCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.+.|+.+.+. .++ |+||+...+...---.++..   .+|.. ++++....+|   ..|.++++++|.    +++
T Consensus        70 RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~---~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~vi  142 (195)
T 2hhl_A           70 RPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW---GVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVII  142 (195)
T ss_dssp             CTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS---SCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEEE
T ss_pred             CcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc---ccEEEEEEcccceecC---CceeeeHhHhCCChhHEEE
Confidence            58899999988766 775 78998776654311112222   23444 2455444455   567888888887    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEE--ecchhhHHHHHHHhhhhHHHH
Q 019991          245 LESSPYSLLEGSMQLNLDLTVM--EKLQIYLLFKLLYLNMMHIHR  287 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~--~~~~~~~~~~~~~~~~~~~~~  287 (332)
                      |+|++ .++++|.++|+...-+  +....=|+.-.-||.-++-..
T Consensus       143 vDDs~-~~~~~~~~ngi~i~~~~~~~~D~eL~~L~~~L~~l~~~~  186 (195)
T 2hhl_A          143 VDNSP-ASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSRED  186 (195)
T ss_dssp             EESCG-GGGTTCGGGEEECCCCSSCTTCCHHHHHHHHHHHHHC--
T ss_pred             EECCH-HHhhhCccCccEEeeecCCCChHHHHHHHHHHHHHHhCc
Confidence            99995 6899999999987654  333344444455666654433

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=91.86  E-value=0.086  Score=49.43  Aligned_cols=44  Identities=25%  Similarity=0.118  Sum_probs=38.2

Q ss_pred             ccEEEEeccceeecCCc--------cCcCHHHHHHHHHHCCCeEEEEeCCCCC
Q 019991           30 FKAWLLDQFGVLHDGKK--------PYPGAISTLEMLATTGAKMVVISNSSRR   74 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~--------~ipGa~e~L~~L~~~G~~v~~vTN~s~~   74 (332)
                      ..++++|+||||++...        .-||+.+||+++. ..+.+++.|++...
T Consensus       140 k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~-~~yeivIfTas~~~  191 (320)
T 3shq_A          140 KKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAY-EDYDIVIWSATSMR  191 (320)
T ss_dssp             CEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHH-HHEEEEEECSSCHH
T ss_pred             CcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHH-hCCEEEEEcCCcHH
Confidence            47999999999999763        6899999999998 57999999987653

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=91.83  E-value=0.2  Score=44.58  Aligned_cols=53  Identities=19%  Similarity=0.174  Sum_probs=40.2

Q ss_pred             cCCccCcCHHHHHHHHHHC-CCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           43 DGKKPYPGAISTLEMLATT-GAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~-G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ....++||+.++|+.|++. |++++++||+++.  .....++.+|+..  |+.++++.
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~--~~~~~l~~~~l~~--f~~i~~~~  164 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRD--MAKKWFDILKIKR--PEYFITAN  164 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHH--HHHHHHHHHTCCC--CSSEECGG
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHH--HHHHHHHHcCCCc--cCEEEEcc
Confidence            4557899999999999999 9999999997642  3455677778763  45566654

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=91.74  E-value=0.048  Score=45.55  Aligned_cols=82  Identities=10%  Similarity=0.060  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCCeEEEeCCh
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRVQMQLESSP  249 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~~lmIGDs~  249 (332)
                      |+++.++++.|++ +.++ |+||+... +...  ......+...|.........++--.        .+++..+||||++
T Consensus        71 ~pg~~e~L~~L~~-~~~~~i~T~~~~~-~~~~--~~~~~~l~~~f~~~~~~~~i~~~~~--------~~l~~~l~ieDs~  138 (180)
T 3bwv_A           71 MPHAQEVVKQLNE-HYDIYIATAAMDV-PTSF--HDKYEWLLEYFPFLDPQHFVFCGRK--------NIILADYLIDDNP  138 (180)
T ss_dssp             CTTHHHHHHHHTT-TSEEEEEECC--C-CSHH--HHHHHHHHHHCTTSCGGGEEECSCG--------GGBCCSEEEESCH
T ss_pred             CcCHHHHHHHHHh-cCCEEEEeCCCCc-chHH--HHHHHHHHHHcCCCCcccEEEeCCc--------CeecccEEecCCc
Confidence            5789999998866 4875 88997321 1100  0000011121110000011111111        0235579999996


Q ss_pred             hhHHHHHHHcCCcEEEEec
Q 019991          250 YSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       250 ~~DI~gA~~aG~~ti~~~~  268 (332)
                       .|++  +++| ++++++.
T Consensus       139 -~~i~--~aaG-~~i~~~~  153 (180)
T 3bwv_A          139 -KQLE--IFEG-KSIMFTA  153 (180)
T ss_dssp             -HHHH--HCSS-EEEEECC
T ss_pred             -chHH--HhCC-CeEEeCC
Confidence             6775  5689 9999973

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=91.68  E-value=0.22  Score=42.67  Aligned_cols=51  Identities=20%  Similarity=0.265  Sum_probs=37.9

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++++.|++. ++++++||++..  .....++.+|+.   |+.++++..
T Consensus       114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--~~~~~l~~~~~~---f~~~~~~~~  164 (254)
T 3umg_A          114 VLTPWPDSVPGLTAIKAE-YIIGPLSNGNTS--LLLDMAKNAGIP---WDVIIGSDI  164 (254)
T ss_dssp             SCCBCTTHHHHHHHHHHH-SEEEECSSSCHH--HHHHHHHHHTCC---CSCCCCHHH
T ss_pred             hCcCCcCHHHHHHHHHhC-CeEEEEeCCCHH--HHHHHHHhCCCC---eeEEEEcCc
Confidence            346799999999999997 999999997642  344567778875   455666543

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=90.54  E-value=0.11  Score=43.09  Aligned_cols=43  Identities=30%  Similarity=0.224  Sum_probs=33.3

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ..++||+.++++.|++.|++++++||++....  ... +.+|+...
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~--~~~-~~~~~~~~  120 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVL--EPF-KELGDEFM  120 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTS--GGG-TTTSSEEE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHH--HHH-HHcCchhh
Confidence            47899999999999999999999999765321  123 56777644

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=90.40  E-value=0.29  Score=42.76  Aligned_cols=46  Identities=15%  Similarity=0.112  Sum_probs=33.6

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .....++||+.++++.|++.|++++++||++..  .....++.+|+..
T Consensus        99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~--~~~~~l~~~~~~~  144 (267)
T 1swv_A           99 PRYASPINGVKEVIASLRERGIKIGSTTGYTRE--MMDIVAKEAALQG  144 (267)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHH--HHHHHHHHHHHTT
T ss_pred             ccccccCccHHHHHHHHHHcCCeEEEEcCCCHH--HHHHHHHHcCCcc
Confidence            345578999999999999999999999997642  2233445555543

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=90.36  E-value=0.2  Score=42.53  Aligned_cols=52  Identities=21%  Similarity=0.307  Sum_probs=38.0

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|++ |++++++||+++.  .....++.  +... |+.++++.+
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~--~~~~~l~~--l~~~-fd~i~~~~~  147 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRN--EFKLSNAK--LGVE-FDHIITAQD  147 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHH--HHHHHHTT--TCSC-CSEEEEHHH
T ss_pred             hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChh--HHHHHHHh--cCCc-cCEEEEccc
Confidence            345789999999999999 8999999997642  23344555  3444 677777764

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=90.10  E-value=0.1  Score=51.34  Aligned_cols=95  Identities=17%  Similarity=0.196  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHhCCCc-EEEecCCccceeccc-eecC----CC-hhHHHHHHh---cCccccc-------------C---
Q 019991          172 QDLEKILEICASKKIP-MVVANPDYVTVEARA-LRVM----PG-TLASKFEKL---GGEVRWM-------------G---  225 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~-~~l~----~G-~i~~~~e~~---g~e~~~~-------------G---  225 (332)
                      +++...|+.+++.|.+ +++||++..+..... ..++    .| .+..+|+.+   .++|..+             |   
T Consensus       189 ~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l~  268 (470)
T 4g63_A          189 KEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMT  268 (470)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCEE
T ss_pred             HhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCccc
Confidence            4556667777788887 689999887754221 0111    13 355666552   1221100             1   


Q ss_pred             ------CC------CHHHHHHHHHHhCC----eEEEeCChhhHHHHHHH-cCCcEEEE-ecc
Q 019991          226 ------KP------DKLWATLFTMILRV----QMQLESSPYSLLEGSMQ-LNLDLTVM-EKL  269 (332)
Q Consensus       226 ------KP------~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~-aG~~ti~~-~~~  269 (332)
                            ||      +-..+.   +.+|.    .++|||.+.+||..++. .||+|++| +++
T Consensus       269 ~~~~~~~~~vY~gGn~~~l~---~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  327 (470)
T 4g63_A          269 NVHGPIVPGVYQGGNAKKFT---EDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  327 (470)
T ss_dssp             ECCSSCCSEEEEECCHHHHH---HHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred             ccccccCCceeecCcHHHHH---HHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence                  11      223333   44454    69999999999998886 79999998 444

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=89.65  E-value=0.3  Score=44.31  Aligned_cols=44  Identities=14%  Similarity=0.102  Sum_probs=30.9

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++.||+.++++.|+++|++++++|..-.  ......++.+|+...
T Consensus       140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~--~~i~~i~~~~g~~~~  183 (297)
T 4fe3_A          140 VMLKEGYENFFGKLQQHGIPVFIFSAGIG--DVLEEVIRQAGVYHS  183 (297)
T ss_dssp             CCBCBTHHHHHHHHHHTTCCEEEEEEEEH--HHHHHHHHHTTCCCT
T ss_pred             CCCCCcHHHHHHHHHHcCCeEEEEeCCcH--HHHHHHHHHcCCCcc
Confidence            35678889999999999999999987432  223344566777543

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=89.62  E-value=0.32  Score=41.86  Aligned_cols=50  Identities=14%  Similarity=0.321  Sum_probs=37.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ..++||+.++++.|++. ++++++||++..  .....++.+|+.   |+.++++..
T Consensus       119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~--~~~~~l~~~g~~---f~~~~~~~~  168 (254)
T 3umc_A          119 LRPWPDTLAGMHALKAD-YWLAALSNGNTA--LMLDVARHAGLP---WDMLLCADL  168 (254)
T ss_dssp             CEECTTHHHHHHHHTTT-SEEEECCSSCHH--HHHHHHHHHTCC---CSEECCHHH
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHH--HHHHHHHHcCCC---cceEEeecc
Confidence            46789999999999985 999999997542  344567778875   456666543

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=88.85  E-value=0.19  Score=45.62  Aligned_cols=76  Identities=9%  Similarity=0.018  Sum_probs=47.7

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCcc-ceeccceecCCChhHHHHHHhcCc-----cccc--CCCCHHHHHHHHHHhC
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYV-TVEARALRVMPGTLASKFEKLGGE-----VRWM--GKPDKLWATLFTMILR  240 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~-~~~~~~~~l~~G~i~~~~e~~g~e-----~~~~--GKP~p~if~~Al~~lg  240 (332)
                      .++++.++++.|.++|+++ |+||.+.. ...         .....++..|-.     ...+  ++|++......++..|
T Consensus       102 ~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~---------~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~g  172 (260)
T 3pct_A          102 AIPGAVEFSNYVNANGGTMFFVSNRRDDVEKA---------GTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMG  172 (260)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEETTTSHH---------HHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTT
T ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCccccHH---------HHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcC
Confidence            3578899999999999985 78886542 110         123334443321     1222  3666666666666544


Q ss_pred             --CeEEEeCChhhHHHH
Q 019991          241 --VQMQLESSPYSLLEG  255 (332)
Q Consensus       241 --~~lmIGDs~~~DI~g  255 (332)
                        +.++|||++ .|+.+
T Consensus       173 y~iv~~iGD~~-~Dl~~  188 (260)
T 3pct_A          173 YDIVLFVGDNL-NDFGD  188 (260)
T ss_dssp             CEEEEEEESSG-GGGCG
T ss_pred             CCEEEEECCCh-HHcCc
Confidence              478999996 79998

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=88.70  E-value=0.16  Score=46.23  Aligned_cols=77  Identities=8%  Similarity=0.043  Sum_probs=45.2

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCcc-ceeccceecCCChhHHHHHHhcCc-----cccc--CCCC-HHHHHHHHHH-
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYV-TVEARALRVMPGTLASKFEKLGGE-----VRWM--GKPD-KLWATLFTMI-  238 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~-~~~~~~~~l~~G~i~~~~e~~g~e-----~~~~--GKP~-p~if~~Al~~-  238 (332)
                      .++++.++++.|.++|+++ |+||.+.. ...         .....++..|-.     ...+  ++|+ ...+..+.+. 
T Consensus       102 ~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~---------~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~G  172 (262)
T 3ocu_A          102 AVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKS---------GTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQG  172 (262)
T ss_dssp             ECTTHHHHHHHHHHTTEEEEEEEEEETTTTHH---------HHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTT
T ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCccchHH---------HHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcC
Confidence            3578889999999999985 78886442 100         122233333221     1121  2343 4455555444 


Q ss_pred             hCCeEEEeCChhhHHHHH
Q 019991          239 LRVQMQLESSPYSLLEGS  256 (332)
Q Consensus       239 lg~~lmIGDs~~~DI~gA  256 (332)
                      +++.++|||++ .|+.++
T Consensus       173 y~iv~~vGD~~-~Dl~~~  189 (262)
T 3ocu_A          173 YEIVLYVGDNL-DDFGNT  189 (262)
T ss_dssp             EEEEEEEESSG-GGGCST
T ss_pred             CCEEEEECCCh-HHhccc
Confidence            45579999996 799983

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=88.37  E-value=0.25  Score=41.19  Aligned_cols=41  Identities=12%  Similarity=0.075  Sum_probs=33.5

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++||+.++++.|+++|++++++||+++  ..+...++.+|+..
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~~~~~~~~~  123 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLS--ESIQPFADYLNIPR  123 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEH--HHHHHHHHHHTCCG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcH--HHHHHHHHHcCCCc
Confidence            789999999999999999999999653  23445677888863

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=87.41  E-value=0.56  Score=41.90  Aligned_cols=33  Identities=18%  Similarity=0.205  Sum_probs=23.7

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL   85 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l   85 (332)
                      ++||+.++|+.    |++++++||+++..  ....|++.
T Consensus       126 ~~pgv~e~L~~----g~~l~i~Tn~~~~~--~~~~l~~~  158 (253)
T 2g80_A          126 VYADAIDFIKR----KKRVFIYSSGSVKA--QKLLFGYV  158 (253)
T ss_dssp             CCHHHHHHHHH----CSCEEEECSSCHHH--HHHHHHSB
T ss_pred             CCCCHHHHHHc----CCEEEEEeCCCHHH--HHHHHHhh
Confidence            46777777776    99999999987532  34556665

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=84.84  E-value=0.0069  Score=51.96  Aligned_cols=104  Identities=11%  Similarity=-0.066  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH-hcCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~-~g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      ++++.+.++.+.+. .++ |.||+...+...---.++..   .+|.. ++++....+|   ..|.++++++|.    +++
T Consensus        57 rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~---~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~vi  129 (181)
T 2ght_A           57 RPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW---GAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVLI  129 (181)
T ss_dssp             CTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT---CCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEEE
T ss_pred             CCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC---CcEEEEEeccCceecC---CcEeccHHHhCCCcceEEE
Confidence            58899999988665 775 78988776544311012221   12333 2344333333   457778888887    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEE--ecchhhHHHHHHHhhh
Q 019991          245 LESSPYSLLEGSMQLNLDLTVM--EKLQIYLLFKLLYLNM  282 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~--~~~~~~~~~~~~~~~~  282 (332)
                      |||++ .+++++.++|+...-.  +....=|+.-.-||.-
T Consensus       130 vdDs~-~~~~~~~~ngi~i~~~~~~~~D~eL~~l~~~L~~  168 (181)
T 2ght_A          130 LDNSP-ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQ  168 (181)
T ss_dssp             ECSCG-GGGTTCTTSBCCCCCCSSCTTCCHHHHHHHHHHH
T ss_pred             EeCCH-HHhccCcCCEeEeccccCCCChHHHHHHHHHHHH
Confidence            99995 6999999999985433  2233334433445543

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=83.74  E-value=2.5  Score=43.87  Aligned_cols=98  Identities=15%  Similarity=0.098  Sum_probs=65.7

Q ss_pred             CccEEEEeccceee----cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHH-
Q 019991           29 RFKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTH-  103 (332)
Q Consensus        29 ~~~~vlfDlDGvL~----~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~-  103 (332)
                      ....+.+..||++.    -.+++.|++.++|+.|+++|+++.++|+...  .......+++|+... +.. +++.+-.. 
T Consensus       533 G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~--~~a~~ia~~lgi~~v-~a~-~~P~~K~~~  608 (736)
T 3rfu_A          533 GASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSK--RTAEAVAGTLGIKKV-VAE-IMPEDKSRI  608 (736)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCH--HHHHHHHHHHTCCCE-ECS-CCHHHHHHH
T ss_pred             CCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCH--HHHHHHHHHcCCCEE-EEe-cCHHHHHHH
Confidence            46788888888765    3678999999999999999999999998543  233445577898765 333 34433221 


Q ss_pred             -HHHhhcCChhhhhcCCeEEEeecCcccchhhhcCC
Q 019991          104 -QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       104 -~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                       +.|++.        |..+..+|.+.-+...++..+
T Consensus       609 v~~l~~~--------g~~V~~vGDG~ND~paL~~Ad  636 (736)
T 3rfu_A          609 VSELKDK--------GLIVAMAGDGVNDAPALAKAD  636 (736)
T ss_dssp             HHHHHHH--------SCCEEEEECSSTTHHHHHHSS
T ss_pred             HHHHHhc--------CCEEEEEECChHhHHHHHhCC
Confidence             223433        567777887654444555544

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=83.67  E-value=3.2  Score=42.32  Aligned_cols=99  Identities=12%  Similarity=0.076  Sum_probs=61.6

Q ss_pred             CccEEEEecccee----ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHH
Q 019991           29 RFKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQ  104 (332)
Q Consensus        29 ~~~~vlfDlDGvL----~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~  104 (332)
                      ..+.+.+..||++    .-.+++.|++.++++.|+++|+++.++|+...  .......+++|+... +.++. +.+ ..+
T Consensus       436 g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~--~~a~~ia~~lgi~~~-~~~~~-P~~-K~~  510 (645)
T 3j08_A          436 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNW--RSAEAISRELNLDLV-IAEVL-PHQ-KSE  510 (645)
T ss_dssp             TCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCH--HHHHHHHHHHTCSEE-ECSCC-TTC-HHH
T ss_pred             CCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHcCCCEE-EEeCC-HHh-HHH
Confidence            3566777777655    45678999999999999999999999998653  234455677898765 34432 221 112


Q ss_pred             HHhhcCChhhhhcCCeEEEeecCcccchhhhcCC
Q 019991          105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLG  138 (332)
Q Consensus       105 ~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g  138 (332)
                      .+++...      ...+..+|.+.-+...++..|
T Consensus       511 ~v~~l~~------~~~v~~vGDg~ND~~al~~A~  538 (645)
T 3j08_A          511 EVKKLQA------KEVVAFVGDGINDAPALAQAD  538 (645)
T ss_dssp             HHHHHTT------TCCEEEEECSSSCHHHHHHSS
T ss_pred             HHHHHhh------CCeEEEEeCCHhHHHHHHhCC
Confidence            2222211      135666776654444555444

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=82.95  E-value=0.52  Score=45.07  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=29.7

Q ss_pred             eeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC
Q 019991           40 VLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR   73 (332)
Q Consensus        40 vL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~   73 (332)
                      +...+.+++||+.++++.|+++|++++++|.+..
T Consensus       215 ~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~  248 (385)
T 4gxt_A          215 KYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFI  248 (385)
T ss_dssp             EEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEH
T ss_pred             eeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcH
Confidence            4456778999999999999999999999998653

>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}

Probab=80.53  E-value=3.7  Score=32.27  Aligned_cols=76  Identities=9%  Similarity=0.008  Sum_probs=56.2

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccc-cccccccHHHHHHHHhh
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL-FAGAITSGELTHQYLLR  108 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~-f~~Iits~~v~~~~L~~  108 (332)
                      .+.+++|+-||-+-...-+.-..++.+.+++.|.++.++.=+    +.+.+.|+..|+.... .+.++.+-+.+.+++.+
T Consensus        48 ~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~----~~v~~~l~~~gl~~~~~~~~i~~t~~~Al~~~~~  123 (130)
T 2kln_A           48 VEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVK----QDLRESLRAASLLDKIGEDHIFMTLPTAVQAFRR  123 (130)
T ss_dssp             CEEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCS----SHHHHHHHHCTTHHHHCTTEEESCHHHHHHHHTT
T ss_pred             ceEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHcCChhhcCcceeECCHHHHHHHHHh
Confidence            678999999999999888888889999999999888776532    3467788889886430 12456665555566554


Q ss_pred             c
Q 019991          109 R  109 (332)
Q Consensus       109 ~  109 (332)
                      +
T Consensus       124 ~  124 (130)
T 2kln_A          124 R  124 (130)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=80.41  E-value=1.3  Score=38.79  Aligned_cols=40  Identities=5%  Similarity=-0.176  Sum_probs=32.7

Q ss_pred             CCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          225 GKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       225 GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      |-+.+..+..+++++|+    +++|||+ .+|+.+++.+|+ ++.+
T Consensus       160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~~g~-~va~  203 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSAR-GVIV  203 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSSE-EEEC
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHhccCc-EEEE
Confidence            44566778888888887    6999999 589999999998 5666

>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*

Probab=80.12  E-value=4.4  Score=31.85  Aligned_cols=85  Identities=13%  Similarity=-0.006  Sum_probs=59.8

Q ss_pred             ccHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcccccccccc
Q 019991           19 NGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS   98 (332)
Q Consensus        19 ~~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits   98 (332)
                      +.+.+.++..+.+.+++|+-||=+-............+.++..|.++.+.--    ++++.+.|...|+.... -.++.+
T Consensus        32 ~~ll~~i~~~~~~~vIlDlsgV~~iDs~g~~~L~~~~~~~~l~G~~~~l~Gi----~p~va~~l~~~G~~l~~-i~~~~~  106 (123)
T 3zxn_A           32 EELLHNITGVAGKGLVIDISALEVVDEFVTRVLIEISRLAELLGLPFVLTGI----KPAVAITLTEMGLDLRG-MATALN  106 (123)
T ss_dssp             HHHHHHHTSSCCSEEEEECTTCSSCCHHHHHHHHHHHHHHHHHTCCEEEECC----CHHHHHHHHHTTCCSTT-SEEESS
T ss_pred             HHHHHHHHhcCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHhCCCccc-eEEECC
Confidence            3555656533678999999999887776666666788888889988866653    34577889999997432 345566


Q ss_pred             HHHHHHHHhh
Q 019991           99 GELTHQYLLR  108 (332)
Q Consensus        99 ~~v~~~~L~~  108 (332)
                      -+.+.+++++
T Consensus       107 l~~Al~~l~~  116 (123)
T 3zxn_A          107 LQKGLDKLKN  116 (123)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            6666666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	332
d1yv9a1	253	c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En	1e-11
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	3e-11
d1wvia_	253	c.108.1.14 (A:) Putative phosphatase SMU.1415c {St	5e-11
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	1e-08

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

 Score = 61.6 bits (148), Expect = 1e-11
 Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 1/98 (1%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
           ++ +L+D  G ++ GK+P P     +E L       + ++N +++   T   +L +    
Sbjct: 2   YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTW 126
               +   T+   T  Y+   +      +      +  
Sbjct: 62  HVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDL 99

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.5 bits (145), Expect = 3e-11
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
           + + ++LD  G  +      PG++  LE L     + V  +N+S   +    +       
Sbjct: 6   KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGV 65

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
                  +TSGE+T +++L+R        GR  I +  + +     E  G  + E   + 
Sbjct: 66  DVPDDAVVTSGEITAEHMLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDEENPDF 118

Query: 149 DFI 151
             +
Sbjct: 119 VVL 121

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

 Score = 60.1 bits (144), Expect = 5e-11
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 8/123 (6%)

Query: 30  FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD 88
           +K +L+D  G ++ GK   P     ++ L       ++++N ++R      + L +    
Sbjct: 2   YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNI 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
            +      T+   T  Y+                ++        ++   G +        
Sbjct: 62  KTPLETIYTATLATIDYMNDMKRGK-------TAYVIGETGLKKAVAEAGYREDSENPAY 114

Query: 149 DFI 151
             +
Sbjct: 115 VVV 117

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score = 52.8 bits (125), Expect = 1e-08
 Identities = 18/98 (18%), Positives = 33/98 (33%)

Query: 29  RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88
             K  + D  GVL       PGA   L  +   G  +V+++N   +    +    +    
Sbjct: 2   TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61

Query: 89  PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTW 126
               +   TS   T  +L R++      +G   +    
Sbjct: 62  DVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHEL 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	332
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	100.0
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	100.0
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	100.0
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	100.0
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.65
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.64
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.63
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.56
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.56
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.56
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.55
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.54
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.51
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.46
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.45
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.44
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.44
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.41
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.4
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.37
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.37
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.35
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.32
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.24
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.21
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.2
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.15
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.63
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.57
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.33
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.18
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.11
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.09
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.09
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	97.97
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.91
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.84
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.81
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	97.77
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.73
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.73
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.72
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.71
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	97.67
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.65
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.5
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.46
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	97.45
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.4
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.4
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.3
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	97.17
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	97.16
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.0
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.93
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.87
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	96.83
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.43
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	96.43
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	96.42
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.26
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	96.11
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	96.04
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	96.0
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	95.86
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	95.64
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	95.22
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	94.81
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	94.49
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	94.28
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	93.83
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	93.38
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	93.31
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	93.01
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	92.65
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	91.24
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	90.65
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	90.48
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	87.03
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	86.97
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	84.84
d1th8b_	115	Anti-sigma factor antagonist SpoIIaa {Bacillus ste	84.67
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	81.41

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=5.3e-34  Score=259.03  Aligned_cols=218  Identities=16%  Similarity=0.215  Sum_probs=181.0

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHH-hCCCCccccccccccHHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~-~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      .||+|+||+||||+++..++|+|.+++++|++.|++++++||+++ +.+.+.+.|+ .+|+.... +.++++..++..++
T Consensus         1 tyk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~-~~i~~~~~~~~~~l   79 (253)
T d1wvia_           1 TYKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPL-ETIYTATLATIDYM   79 (253)
T ss_dssp             CCCEEEEECBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCG-GGEEEHHHHHHHHH
T ss_pred             CcCEEEEcCcCceEECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccccc-cccccHHHHHHHHH
Confidence            489999999999999999999999999999999999999999874 6677788885 47888774 89999999999999


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      ++...      +.+++.++.... ...+.+.+.....  +.+...+.          +.+..++|.+...+.. +...+.
T Consensus        80 ~~~~~------~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~  139 (253)
T d1wvia_          80 NDMKR------GKTAYVIGETGL-KKAVAEAGYREDS--ENPAYVVV----------GLDTNLTYEKLTLATL-AIQKGA  139 (253)
T ss_dssp             HHHCC------CSEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCBHHHHHHHHH-HHHTTC
T ss_pred             HHhcc------CceeeeccchHH-HHHHHHcCCcccc--cccceEEE----------ecCCCcCHHHHHHHhh-hhhhcc
Confidence            87765      456766654221 1245666654432  56677777          5567888888777765 356788


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      ++|+||+|..++...+...++|.+..+++.. +.++..+|||+|.+|+.|++++|+    .+|||||+.+||+||+++||
T Consensus       140 ~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~  219 (253)
T d1wvia_         140 VFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDI  219 (253)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred             ccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCC
Confidence            8999999999998776667888888888885 889999999999999999999998    69999999999999999999


Q ss_pred             cEEEEe
Q 019991          262 DLTVME  267 (332)
Q Consensus       262 ~ti~~~  267 (332)
                      +|||+.
T Consensus       220 ~si~V~  225 (253)
T d1wvia_         220 ATLLVT  225 (253)
T ss_dssp             EEEEES
T ss_pred             CEEEEC
Confidence            999984

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-32  Score=250.66  Aligned_cols=221  Identities=20%  Similarity=0.272  Sum_probs=182.9

Q ss_pred             HhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHH
Q 019991           24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELT  102 (332)
Q Consensus        24 ~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~  102 (332)
                      +++  +|++|+||+||||+++.+++|+|.++|++|+++|++++++||++ ++..++.++++.+|++... ++++|+++..
T Consensus         3 ~~~--~ik~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~-~~v~ts~~~~   79 (261)
T d1vjra_           3 VLD--KIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD-DAVVTSGEIT   79 (261)
T ss_dssp             GGG--GCCEEEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG-GGEEEHHHHH
T ss_pred             hHH--hCCEEEEeCCCeeEECCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccc-ceeccHHHHH
Confidence            567  89999999999999999999999999999999999999999986 5777889999999999885 8999999999


Q ss_pred             HHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHH
Q 019991          103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA  182 (332)
Q Consensus       103 ~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~  182 (332)
                      ..++.+...      +.++++.+.... ..++.+.+....+  ++...+++          +.+.++.|.....++. +.
T Consensus        80 ~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~-~~  139 (261)
T d1vjra_          80 AEHMLKRFG------RCRIFLLGTPQL-KKVFEAYGHVIDE--ENPDFVVL----------GFDKTLTYERLKKACI-LL  139 (261)
T ss_dssp             HHHHHHHHC------SCEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHH-HH
T ss_pred             HHHHHHhcC------CceEEEecccch-hHHHHhcCcccch--hhcceeEe----------cCCcccchHHHHHHHH-Hh
Confidence            999876643      356666554322 2356777765543  45556666          4567888888887775 46


Q ss_pred             hCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcc-cccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHH
Q 019991          183 SKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEV-RWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGS  256 (332)
Q Consensus       183 ~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~-~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA  256 (332)
                      ..+.+++++|+|..++...+.....|.+...+..+ |.++ ...|||+|.+|+.|++++|+    .+||||++.+||+||
T Consensus       140 ~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga  219 (261)
T d1vjra_         140 RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLG  219 (261)
T ss_dssp             TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHH
T ss_pred             hcCcceecccCCccccCCCCcccccchhhHHHhhhcccccccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHH
Confidence            77888999999999888776667778888877775 6654 56799999999999999998    699999999999999


Q ss_pred             HHcCCcEEEEe
Q 019991          257 MQLNLDLTVME  267 (332)
Q Consensus       257 ~~aG~~ti~~~  267 (332)
                      +++||+|||+.
T Consensus       220 ~~aG~~si~V~  230 (261)
T d1vjra_         220 KNAGIVSILVL  230 (261)
T ss_dssp             HHHTCEEEEES
T ss_pred             HHCCCcEEEEC
Confidence            99999999994

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=100.00  E-value=1.9e-32  Score=248.30  Aligned_cols=217  Identities=17%  Similarity=0.230  Sum_probs=178.8

Q ss_pred             CccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHH-hCCCCccccccccccHHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLK-SLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~-~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      +|++|+||+||||+++..++|++.++|++|++.|++++++||++ ++.+++.++|. .+|+.... +.++++..+...++
T Consensus         1 ~yk~v~fDlDGTL~~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~-~~i~~~~~~~~~~l   79 (253)
T d1yv9a1           1 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPA-SLVYTATLATIDYM   79 (253)
T ss_dssp             SCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCEEEEcCCCccEeCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCcccc-ccccCHHHHHHHHH
Confidence            48999999999999999999999999999999999999999987 56778888885 57888874 88999999999999


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      ++...      ...++..+.... .......+.....  .+++.++.          +.+..++|.++...... ...+.
T Consensus        80 ~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~  139 (253)
T d1yv9a1          80 KEANR------GKKVFVIGEAGL-IDLILEAGFEWDE--TNPDYVVV----------GLDTELSYEKVVLATLA-IQKGA  139 (253)
T ss_dssp             HHHCC------CSEEEEESCHHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHH-HHTTC
T ss_pred             HhccC------CCeEEecccchh-hhhhhhhcccccc--cCcceEEE----------eccCcccHHHhhhhhhh-hcccc
Confidence            87654      345665553221 2233444444432  46677777          56688899998877765 46777


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      +++++|+|...+...+...+.|.+..+++.+ +.++...|||+|.+|+.+++++|+    ++||||++.+||+||+++||
T Consensus       140 ~~i~~n~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~  219 (253)
T d1yv9a1         140 LFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGI  219 (253)
T ss_dssp             EEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred             ceeeecCCccccccCceeeecccccccccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCC
Confidence            8899999999988776667788899999885 889999999999999999999998    69999999999999999999


Q ss_pred             cEEEE
Q 019991          262 DLTVM  266 (332)
Q Consensus       262 ~ti~~  266 (332)
                      +|+|+
T Consensus       220 ~si~V  224 (253)
T d1yv9a1         220 DSLLV  224 (253)
T ss_dssp             EEEEE
T ss_pred             CEEEE
Confidence            99998

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.7e-32  Score=245.65  Aligned_cols=215  Identities=19%  Similarity=0.266  Sum_probs=175.5

Q ss_pred             cCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCC-CChhHHHHHHHhCCCCccccccccccHHHHHHHH
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s-~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      |++++|+||+||||+++..++|++.++|+.|+++|++++|+||++ ++++++.++|+++|++.+. ++|+++...+..++
T Consensus         1 M~ik~VifDlDGTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~-~~i~~~~~~~~~~l   79 (250)
T d2c4na1           1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFL   79 (250)
T ss_dssp             CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG-GGEEEHHHHHHHHH
T ss_pred             CCCCEEEEECCCeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccc-eeEechHHHHHHHH
Confidence            679999999999999999999999999999999999999999987 5678899999999999885 89999999999998


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCccccCCCCCccEEEEecCCCCCCCCCCCcccCHHHHHHHHHHHHhCCC
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKI  186 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~~~~~~~~~vv~~~~~~~~~~~g~d~~~~y~~l~~~l~~l~~~g~  186 (332)
                      +...       ++++++++.... ..++........+  ..+...+.          |....+++.....+... ...+.
T Consensus        80 ~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~----------~~~~~~~~~~~~~~~~~-~~~~~  138 (250)
T d2c4na1          80 RRQE-------GKKAYVVGEGAL-IHELYKAGFTITD--VNPDFVIV----------GETRSYNWDMMHKAAYF-VANGA  138 (250)
T ss_dssp             HTSS-------CCEEEEECCTHH-HHHHHHTTCEECS--SSCSEEEE----------CCCTTCCHHHHHHHHHH-HHTTC
T ss_pred             Hhhh-------cccccccCCHHH-HHHHHHhhhhccc--cccceeec----------cCCcccchHHHHHHHHH-Hhccc
Confidence            8764       467777665322 2345544443332  34445555          44577788888777764 56677


Q ss_pred             cEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          187 PMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       187 ~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      .++++|++.....   ..+..|.+..+++.+ ++++...|||+|.+|+.|++++|+    ++||||++.+||+||+++||
T Consensus       139 ~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~  215 (250)
T d2c4na1         139 RFIATNPDTHGRG---FYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL  215 (250)
T ss_dssp             EEEESCCCSBSST---TCBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred             cccccccccccCc---eeecCcchHHHHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCC
Confidence            7899999876432   246778899999885 788899999999999999999998    69999999999999999999


Q ss_pred             cEEEEe
Q 019991          262 DLTVME  267 (332)
Q Consensus       262 ~ti~~~  267 (332)
                      +|||+.
T Consensus       216 ~tilV~  221 (250)
T d2c4na1         216 ETILVL  221 (250)
T ss_dssp             EEEEES
T ss_pred             CEEEEC
Confidence            999983

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.65  E-value=1.5e-17  Score=144.01  Aligned_cols=92  Identities=13%  Similarity=0.112  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.+. ++.++ |+||........   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++|
T Consensus        84 ~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~---~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          84 YPGITSLFEQLP-SELRLGIVTSQRRNELES---GMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             CTTHHHHHHHSC-TTSEEEEECSSCHHHHHH---HHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             ccchhhhhhhhc-cccccccccccccccccc---ccccccccccccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            477889998875 45664 889876554332   35555677888875 777788899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEe
Q 019991          245 LESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      |||+ .+||++|+++||+++++.
T Consensus       160 VgDs-~~Di~~a~~aG~~~i~v~  181 (207)
T d2hdoa1         160 IGDS-VSDEQTAQAANVDFGLAV  181 (207)
T ss_dssp             EESS-HHHHHHHHHHTCEEEEEG
T ss_pred             ecCC-HHHHHHHHHcCCeEEEEe
Confidence            9999 589999999999999984

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.64  E-value=1.9e-17  Score=141.79  Aligned_cols=93  Identities=12%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC--eEEEe
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV--QMQLE  246 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~--~lmIG  246 (332)
                      |+++.++++.+.++|.++ |+||.+.....    .+..-.+..+|+.+ +++.....||+|++|+.+++++++  ++|||
T Consensus        81 ~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~----~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~l~vg  156 (187)
T d2fi1a1          81 FEGVSDLLEDISNQGGRHFLVSHRNDQVLE----ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIG  156 (187)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTHHHH----HHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEE
T ss_pred             cchhHHHHHHHHhhhccccccccCccchhh----hhhhhccccccccccccccccccCCCHHHHHHHHHHcCCCCeEEEe
Confidence            577899999999999985 78887654321    13333466778875 777778899999999999999998  79999


Q ss_pred             CChhhHHHHHHHcCCcEEEEec
Q 019991          247 SSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       247 Ds~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |+ ..|+++|+++|+++++++.
T Consensus       157 Ds-~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         157 DR-PIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             SS-HHHHHHHHHTTCEEEECSC
T ss_pred             CC-HHHHHHHHHcCCEEEEECC
Confidence            99 5799999999999999975

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=3e-17  Score=142.69  Aligned_cols=94  Identities=17%  Similarity=0.161  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|.++ |+||.+......   .+...++..+|+.+ +++....+||+|++|+.+++++|+    .+|
T Consensus        90 ~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~---~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~  166 (218)
T d1te2a_          90 LPGVREAVALCKEQGLLVGLASASPLHMLEK---VLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVA  166 (218)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cchHHHHHHHhhhcccccccccccccccccc---ccccccccccccccccccccccchhhHHHHHHHHHHcCCCchhcEE
Confidence            478899999999999986 889976654322   24444677788885 778888999999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||++ .||++|+++|+++|+++.
T Consensus       167 igD~~-~di~aA~~~G~~~i~v~~  189 (218)
T d1te2a_         167 LEDSV-NGMIASKAARMRSIVVPA  189 (218)
T ss_dssp             EESSH-HHHHHHHHTTCEEEECCC
T ss_pred             EeeCH-HHHHHHHHcCCEEEEECC
Confidence            99995 799999999999999854

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.56  E-value=1.2e-16  Score=137.74  Aligned_cols=94  Identities=10%  Similarity=0.042  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|+++ |+||.+... . .  .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++|
T Consensus        84 ~pgv~~~L~~L~~~g~~~~v~Sn~~~~~-~-~--~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~  159 (204)
T d2go7a1          84 MPGAREVLAWADESGIQQFIYTHKGNNA-F-T--ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYY  159 (204)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTHH-H-H--HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             cchHHhhhhcccccccchhhhcccchhh-h-h--hhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCceEEE
Confidence            578999999999999986 788865432 1 1  23334577778775 777888999999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecc
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      |||+ ..|+++|+++||++|++...
T Consensus       160 VgD~-~~Di~~A~~~G~~~i~v~~~  183 (204)
T d2go7a1         160 IGDR-TLDVEFAQNSGIQSINFLES  183 (204)
T ss_dssp             EESS-HHHHHHHHHHTCEEEESSCC
T ss_pred             EeCC-HHHHHHHHHcCCeEEEEcCC
Confidence            9999 57999999999999998543

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.56  E-value=4.7e-16  Score=134.70  Aligned_cols=94  Identities=13%  Similarity=0.076  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.|+++|.++ ++||.+......   .+...++..+|+.+ ++.....+||+|.+|..+++++++    .+|
T Consensus        97 ~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~---~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~  173 (224)
T d2hsza1          97 YPNVKETLEALKAQGYILAVVTNKPTKHVQP---ILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILF  173 (224)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             HHHHHHHHHHHhccCCcccccccccHHHHHH---HHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccch
Confidence            578899999999999986 788876643322   24444577888874 777888899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEec
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      |||+. .||++|+++|+++||++.
T Consensus       174 igD~~-~Di~~A~~aG~~~i~v~~  196 (224)
T d2hsza1         174 VGDSQ-NDIFAAHSAGCAVVGLTY  196 (224)
T ss_dssp             EESSH-HHHHHHHHHTCEEEEESS
T ss_pred             hcCcH-HHHHHHHHcCCeEEEEeC
Confidence            99995 799999999999999963

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.56  E-value=8.2e-16  Score=133.66  Aligned_cols=93  Identities=13%  Similarity=0.056  Sum_probs=74.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .++++.++++.|++++.++ ++||.+....     .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++
T Consensus        92 ~~~g~~~~l~~l~~~~~~i~i~s~~~~~~~-----~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l  166 (221)
T d1o08a_          92 VYPGILQLLKDLRSNKIKIALASASKNGPF-----LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCTTHHH-----HHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             ccCCceeccccccccccceEEEeecchhhH-----HHHhhccccccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence            3578899999999999886 5677544321     23333566677774 677788999999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEEEEec
Q 019991          244 QLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||||+. .||++|+++||++|+++.
T Consensus       167 ~VgD~~-~di~~A~~aG~~~i~v~~  190 (221)
T d1o08a_         167 GLEDSQ-AGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             EEESSH-HHHHHHHHHTCEEEEESC
T ss_pred             EEecCH-HHHHHHHHcCCEEEEECC
Confidence            999995 799999999999999975

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=3.8e-16  Score=135.36  Aligned_cols=103  Identities=17%  Similarity=0.080  Sum_probs=79.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccc-eecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~-~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .|+++.++++.|+++|.++ ++||.....+.... ......++..+|+.+ +++....+||+|.+|+.+++++++    +
T Consensus        98 ~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~~  177 (222)
T d1cr6a1          98 INRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEV  177 (222)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTSE
T ss_pred             CCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcceE
Confidence            4689999999999999986 77876554332211 012223466677774 667788899999999999999998    5


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecchhhH
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKLQIYL  273 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~~~~~  273 (332)
                      +||||+ ..||++|+++||++||+++.++-+
T Consensus       178 l~IgD~-~~Di~~A~~aG~~ti~V~~~~~~~  207 (222)
T d1cr6a1         178 VFLDDF-GSNLKPARDMGMVTILVHNTASAL  207 (222)
T ss_dssp             EEEESS-STTTHHHHHHTCEEEECCSSSHHH
T ss_pred             EEEECC-HHHHHHHHHcCCEEEEECCcchHH
Confidence            999999 589999999999999998777654

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.4e-16  Score=140.97  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=75.3

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eE
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QM  243 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~l  243 (332)
                      .|+++.++++.|+ ++.++ ++||.+.......   +...++..+|+.+ +++....+||+|.+|+.+++++|+    .+
T Consensus       110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~---l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l  185 (247)
T d2gfha1         110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREK---IEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV  185 (247)
T ss_dssp             CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHH---HHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             cCccHHHHHHHhh-cccceEEeecccchhhhhh---hhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcc
Confidence            4689999999886 56675 8899876543321   2333466777764 667778899999999999999998    69


Q ss_pred             EEeCChhhHHHHHHHcCCcEE-EEecch
Q 019991          244 QLESSPYSLLEGSMQLNLDLT-VMEKLQ  270 (332)
Q Consensus       244 mIGDs~~~DI~gA~~aG~~ti-~~~~~~  270 (332)
                      ||||++.+||.+|+++||+++ |+++..
T Consensus       186 ~iGD~~~~Di~~A~~~G~~~~~~~~~~~  213 (247)
T d2gfha1         186 MVGDTLETDIQGGLNAGLKATVWINKSG  213 (247)
T ss_dssp             EEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred             eeccChHhHHHHHHHcCCeEEEEECCCC
Confidence            999999899999999999955 555433

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.51  E-value=8.3e-16  Score=137.03  Aligned_cols=96  Identities=9%  Similarity=0.024  Sum_probs=73.5

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHh-cCcccccCCCCHHHHHHHHHHhCC-----
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKL-GGEVRWMGKPDKLWATLFTMILRV-----  241 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~-g~e~~~~GKP~p~if~~Al~~lg~-----  241 (332)
                      .|+++.++++.|+++|+++ |+||.+......   .+...++..++ +.+ +++....+||+|.+|..+++++|+     
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~---~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~  176 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYTREMMDI---VAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  176 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHH---HHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCchhhHHH---HHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcce
Confidence            3578999999999999996 889876543322   12222344444 333 556667899999999999999997     


Q ss_pred             eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          242 QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       242 ~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++||||+. .||++|+++||++|++-.-
T Consensus       177 ~v~VgDs~-~Di~aA~~aG~~ti~v~~G  203 (257)
T d1swva_         177 MIKVGDTV-SDMKEGRNAGMWTVGVILG  203 (257)
T ss_dssp             EEEEESSH-HHHHHHHHTTSEEEEECTT
T ss_pred             EEEEeCCh-hhHHHHHHCCCEEEEEccC
Confidence            48999995 7999999999999999553

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.46  E-value=3.4e-15  Score=128.63  Aligned_cols=91  Identities=9%  Similarity=0.031  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      |+++.++++.+..++...++||........   .+..-++..+|+.+ +.+  ..+||+|.+|..+++++|+    .+||
T Consensus        86 ~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~---~l~~~gl~~~fd~v~~~~--~~~~~~p~~~~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1          86 FPQIIDLLEELSSSYPLYITTTKDTSTAQD---MAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             CTTHHHHHHHHHTTSCEEEEEEEEHHHHHH---HHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             hhHHHHHHhhhhcccchhhcccccchhhhH---HHHhhccccccccccccc--ccccccccccchhhhhhhcccccceee
Confidence            466788888877666556888865543332   23333455666653 333  3589999999999999998    6999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEe
Q 019991          246 ESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      ||+ .+|+++|+++|+++||+.
T Consensus       161 GDs-~~Di~aa~~aGi~~i~v~  181 (210)
T d2ah5a1         161 GDT-KFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             ESS-HHHHHHHHHHTCEEEEES
T ss_pred             cCC-HHHHHHHHHcCCeEEEEc
Confidence            999 579999999999999996

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=4.7e-14  Score=117.96  Aligned_cols=98  Identities=10%  Similarity=0.076  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEEE
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQL  245 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lmI  245 (332)
                      ++..+++..+..++.++ ++||.........  ....+.+..+|+.+ +++....+||+|.+|+.+++++|+    ++||
T Consensus        87 ~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~--~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~v  164 (197)
T d2b0ca1          87 PEVIAIMHKLREQGHRVVVLSNTNRLHTTFW--PEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFF  164 (197)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCCCCTTSCC--GGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred             chhHHHHHHHHhcCCeEEEEeCccHHHHHHH--HHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeEEEE
Confidence            66777887788888875 6777655433221  12334677888875 667788999999999999999998    6999


Q ss_pred             eCChhhHHHHHHHcCCcEEEEecchhh
Q 019991          246 ESSPYSLLEGSMQLNLDLTVMEKLQIY  272 (332)
Q Consensus       246 GDs~~~DI~gA~~aG~~ti~~~~~~~~  272 (332)
                      ||++ .||++|+++||+|||++.....
T Consensus       165 gDs~-~di~~A~~aG~~ti~v~~~~~~  190 (197)
T d2b0ca1         165 DDNA-DNIEGANQLGITSILVKDKTTI  190 (197)
T ss_dssp             ESCH-HHHHHHHTTTCEEEECCSTTHH
T ss_pred             eCCH-HHHHHHHHcCCEEEEECCCCCC
Confidence            9996 7999999999999999876654

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=6.9e-14  Score=117.95  Aligned_cols=45  Identities=4%  Similarity=0.031  Sum_probs=37.4

Q ss_pred             cCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          224 MGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       224 ~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ..||+|.+++.|++++|+    ++||||+. +||++|+++||+++|++.-
T Consensus       102 ~~KP~p~~~~~~~~~~~id~~~~~~IGD~~-~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         102 CRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             SSTTSSGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTT
T ss_pred             ccccccHHHHHHHHhcCCChhcEEEECCCH-HHHHHHHHcCCeEEEECCC
Confidence            469999999999999998    69999996 8999999999999999654

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.44  E-value=2.4e-13  Score=119.30  Aligned_cols=45  Identities=11%  Similarity=0.034  Sum_probs=40.7

Q ss_pred             cCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          224 MGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       224 ~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ..||+|.++..|++++++    .+||||+ .+||++|++|||+++|+..-
T Consensus       127 ~rKP~p~ml~~a~~~~~i~~~~~~~VGD~-~~Di~aA~~AGi~~i~v~~g  175 (209)
T d2o2xa1         127 MRKPNPGMLVEAGKRLALDLQRSLIVGDK-LADMQAGKRAGLAQGWLVDG  175 (209)
T ss_dssp             TSTTSCHHHHHHHHHHTCCGGGCEEEESS-HHHHHHHHHTTCSEEEEETC
T ss_pred             cccccchhhhHhHHHhCCCccceEEeCCC-HHHHHHHHHCCCcEEEEeCC
Confidence            469999999999999998    6999999 58999999999999998543

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.41  E-value=1.2e-12  Score=109.64  Aligned_cols=42  Identities=5%  Similarity=-0.054  Sum_probs=38.7

Q ss_pred             CCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          226 KPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       226 KP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      ||+|..|..+++++|+    .+||||++ .|+++|+++|+++|++..
T Consensus        98 kp~~~~~~~~~~~~~~~~~~~l~igD~~-~di~aA~~aG~~~i~v~~  143 (164)
T d1u7pa_          98 GSKVTHFERLHHKTGVPFSQMVFFDDEN-RNIIDVGRLGVTCIHIRD  143 (164)
T ss_dssp             SCHHHHHHHHHHHHCCCGGGEEEEESCH-HHHHHHHTTTCEEEECSS
T ss_pred             CCChHHHHHHHHHhCCChHHEEEEcCCH-HHHHHHHHcCCEEEEECC
Confidence            7999999999999998    69999995 799999999999999964

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.40  E-value=8.6e-15  Score=128.51  Aligned_cols=98  Identities=16%  Similarity=0.180  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHhCCCc-EEEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.+  ++.. .++||........   .+...++..+|+.+ +++....+||+|++|+.+++++|+    .+|
T Consensus        95 ~~~~~~~L~~l--~~~~~~v~s~~~~~~~~~---~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~  169 (245)
T d1qq5a_          95 YPDAAQCLAEL--APLKRAILSNGAPDMLQA---LVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (245)
T ss_dssp             CTTHHHHHHHH--TTSEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             chhhhHHHHHH--hhhceeEEeccchHHHHH---HHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence            46677777765  3444 4677766543322   13334566677764 667778899999999999999999    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecchhhHH
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQIYLL  274 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~~~~~  274 (332)
                      |||+. .||.+|+++||+|||+++......
T Consensus       170 VgD~~-~di~~A~~aG~~tv~v~r~~~~~~  198 (245)
T d1qq5a_         170 VSSNG-FDVGGAKNFGFSVARVARLSQEAL  198 (245)
T ss_dssp             EESCH-HHHHHHHHHTCEEEEECCSCHHHH
T ss_pred             EeCCH-HHHHHHHHcCCeEEEEcCCCcccc
Confidence            99995 799999999999999998765443

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=1.6e-13  Score=118.11  Aligned_cols=64  Identities=9%  Similarity=-0.051  Sum_probs=52.3

Q ss_pred             cCCChhHHHHHHhcCcccccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          205 VMPGTLASKFEKLGGEVRWMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       205 l~~G~i~~~~e~~g~e~~~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +...++..+|+.+........||+|.+|+.+++++|+    ++||||++ .||.||+++||+|||+++-
T Consensus       138 l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~-~Dv~~A~~aG~~ti~v~r~  205 (225)
T d2g80a1         138 HDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLASRP  205 (225)
T ss_dssp             SCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEECCT
T ss_pred             HHhcCCccccceeeeccccCCCCChhHhHHHHHhcccCchhceeecCCH-HHHHHHHHcCCEEEEEeCC
Confidence            3445677777775333444579999999999999998    69999995 7999999999999999863

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=7.3e-13  Score=113.08  Aligned_cols=43  Identities=12%  Similarity=0.053  Sum_probs=38.6

Q ss_pred             ccCCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          223 WMGKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       223 ~~GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      ...||+|.++..+++++++    .+||||+. +||++|++||+.++++
T Consensus       105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~-~Di~aA~~Ag~~~~~l  151 (182)
T d2gmwa1         105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVL  151 (182)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEE
T ss_pred             cccCCccccccchhhhcccccccccccCCCH-HHHHHHHHhCCCcEEE
Confidence            4579999999999999998    69999995 8999999999987554

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.35  E-value=6.1e-14  Score=121.64  Aligned_cols=92  Identities=11%  Similarity=0.039  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHhCCCcEEEecCCccceeccceecCCChhHHHHHHh--cCcc--cccCCCCHHHHHHHHHHhCC----e
Q 019991          171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL--GGEV--RWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~lIaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g~e~--~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      ++++.++++.+..++  .++||........   .+..-++..+|...  +.+.  ....||+|++|..+++++|+    +
T Consensus        87 ~~g~~~~L~~l~~~~--~i~t~~~~~~~~~---~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~  161 (222)
T d2fdra1          87 IDGVKFALSRLTTPR--CICSNSSSHRLDM---MLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV  161 (222)
T ss_dssp             CTTHHHHHHHCCSCE--EEEESSCHHHHHH---HHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             hhhHHHHhhhccccc--eeeeecchhhhhh---hhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceE
Confidence            466777777653322  5778765543221   23333455666552  2222  35679999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                      +||||++ .|+++|+++||++|++..
T Consensus       162 l~vgDs~-~dv~aA~~aG~~~i~v~~  186 (222)
T d2fdra1         162 VVVEDSV-HGIHGARAAGMRVIGFTG  186 (222)
T ss_dssp             EEEESSH-HHHHHHHHTTCEEEEECC
T ss_pred             EEEcCCH-HHHHHHHHcCCEEEEEcc
Confidence            9999995 799999999999999954

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.32  E-value=5.8e-13  Score=116.11  Aligned_cols=93  Identities=6%  Similarity=-0.011  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHhCC-CcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHh---CC---
Q 019991          171 LQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMIL---RV---  241 (332)
Q Consensus       171 y~~l~~~l~~l~~~g-~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~l---g~---  241 (332)
                      |+++.++|+.|.++| +++ |+||.+......   .+...++..+|+.+ +++.....||.|.++...++.+   ++   
T Consensus        93 ~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~---~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~  169 (228)
T d2hcfa1          93 LEGVRELLDALSSRSDVLLGLLTGNFEASGRH---KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPS  169 (228)
T ss_dssp             CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHH---HHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred             cCchHHHHhhhhccccccccccCCCcchhhhh---hhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCChh
Confidence            467899999988776 675 888876653332   24555677788874 6666778899999877666555   44   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                       .+||||++ .||++|+++||++|++.
T Consensus       170 ~~l~VGD~~-~Di~aA~~aG~~~i~v~  195 (228)
T d2hcfa1         170 QIVIIGDTE-HDIRCARELDARSIAVA  195 (228)
T ss_dssp             GEEEEESSH-HHHHHHHTTTCEEEEEC
T ss_pred             HheeecCCh-HHHHHHHHcCCEEEEEc
Confidence             69999996 79999999999999985

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=110.99  Aligned_cols=103  Identities=15%  Similarity=0.086  Sum_probs=78.6

Q ss_pred             CHHHHHHHHHHHHhCCCcE-EEecCCccceeccc-eecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----e
Q 019991          170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----Q  242 (332)
Q Consensus       170 ~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~-~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~  242 (332)
                      .++++.+++..|+++|.++ ++||.......... .......+..+|+.+ +++....+||+|.+|+.+++++|+    +
T Consensus       100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e~  179 (225)
T d1zd3a1         100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV  179 (225)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCccce
Confidence            3588899999999999986 78987554332111 111223455566664 667788899999999999999998    6


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecchhhH
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKLQIYL  273 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~~~~~  273 (332)
                      +||||+ .+||++|+++||+|||++.....+
T Consensus       180 l~VgD~-~~Di~~A~~~G~~ti~v~~~~~~~  209 (225)
T d1zd3a1         180 VFLDDI-GANLKPARDLGMVTILVQDTDTAL  209 (225)
T ss_dssp             EEEESC-HHHHHHHHHTTCEEEECSSHHHHH
T ss_pred             eEEecC-HHHHHHHHHcCCEEEEECCcchhH
Confidence            999999 589999999999999998765543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.21  E-value=3.3e-12  Score=109.94  Aligned_cols=97  Identities=14%  Similarity=0.155  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.++.++.++ ++||.+......   .+..+.+...|+.+ ++.....+||+|.+|+.+++++|+    ++|
T Consensus        95 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~---~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~  171 (220)
T d1zrna_          95 FSEVPDSLRELKRRGLKLAILSNGSPQSIDA---VVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF  171 (220)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred             cchhHHHHHHHHhcCCeEEeecchHHHHHHH---HHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence            466788888888899885 788876553332   24445667777774 777788999999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecchh
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQI  271 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~~  271 (332)
                      |||++ .||++|+++||+++|+++-..
T Consensus       172 VgD~~-~Di~~A~~aG~~~v~v~r~~~  197 (220)
T d1zrna_         172 VASNA-WDATGARYFGFPTCWINRTGN  197 (220)
T ss_dssp             EESCH-HHHHHHHHHTCCEEEECTTCC
T ss_pred             EecCh-HhHHHHHHcCCEEEEEcCCCC
Confidence            99997 699999999999999976543

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=6.9e-12  Score=108.76  Aligned_cols=97  Identities=6%  Similarity=-0.023  Sum_probs=74.1

Q ss_pred             ccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh--cCcccccCCCCHHHHHHHHHHhCC---
Q 019991          168 PMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL--GGEVRWMGKPDKLWATLFTMILRV---  241 (332)
Q Consensus       168 ~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~--g~e~~~~GKP~p~if~~Al~~lg~---  241 (332)
                      ...|+++.++++.|+++|.++ |+||.+......   .+...++..+++..  ..+....+||+|.+|..+++++|+   
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~  202 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKL---LFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN  202 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHH---HHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHH---HHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcC
Confidence            345789999999999999986 889987654322   12233333344432  224456799999999999999998   


Q ss_pred             -eEEEeCChhhHHHHHHHcCCcEEEEec
Q 019991          242 -QMQLESSPYSLLEGSMQLNLDLTVMEK  268 (332)
Q Consensus       242 -~lmIGDs~~~DI~gA~~aG~~ti~~~~  268 (332)
                       ++||||++ .||.+|+++||++||+++
T Consensus       203 ~~l~vgD~~-~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         203 NILFLTDVT-REASAAEEADVHVAVVVR  229 (253)
T ss_dssp             GEEEEESCH-HHHHHHHHTTCEEEEECC
T ss_pred             cEEEEeCCH-HHHHHHHHcCCEEEEEeC
Confidence             69999996 699999999999999964

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.15  E-value=2.5e-12  Score=112.23  Aligned_cols=96  Identities=15%  Similarity=0.156  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHHh-cCcccccCCCCHHHHHHHHHHhCC----eEE
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKLWATLFTMILRV----QMQ  244 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~~-g~e~~~~GKP~p~if~~Al~~lg~----~lm  244 (332)
                      |+++.++++.| +++.++ ++||.+......   .+...++..+|+.+ +++....+||+|.+|+.+++++|+    ++|
T Consensus       102 ~p~~~~~L~~l-~~~~~i~i~Sn~~~~~~~~---~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~  177 (230)
T d1x42a1         102 YPEVVEVLKSL-KGKYHVGMITDSDTEYLMA---HLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (230)
T ss_dssp             CTTHHHHHHHH-BTTBEEEEEESSCHHHHHH---HHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             cccHHHHHHHh-hccCceeeeeccccccchh---hhcccccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence            57889999987 457776 789976654332   13333466677774 666678899999999999999998    699


Q ss_pred             EeCChhhHHHHHHHcCCcEEEEecch
Q 019991          245 LESSPYSLLEGSMQLNLDLTVMEKLQ  270 (332)
Q Consensus       245 IGDs~~~DI~gA~~aG~~ti~~~~~~  270 (332)
                      |||++.+||++|+++||+++|+++..
T Consensus       178 vgD~~~~Di~~A~~~G~~~v~v~~~~  203 (230)
T d1x42a1         178 VGDNPVKDCGGSKNLGMTSILLDRKG  203 (230)
T ss_dssp             EESCTTTTHHHHHTTTCEEEEECTTS
T ss_pred             eecCcHhHHHHHHHcCCEEEEECCCC
Confidence            99998899999999999999997654

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.63  E-value=8.1e-07  Score=75.35  Aligned_cols=59  Identities=12%  Similarity=0.139  Sum_probs=45.9

Q ss_pred             CccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      +++.++||+||||.++. .+.+.+.++|++|++.|++++++|+.+  .......+...++..
T Consensus         1 kiK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~gi~v~~~TGR~--~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNT--VQFAEAASILIGTSG   60 (230)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEECSSC--HHHHHHHHHHHTCCS
T ss_pred             CceEEEEecCCCCcCCCCccCHHHHHHHHHHHhCCCeEEEEeCCc--HHHHHHHHHhcCCCc
Confidence            47899999999999866 466788999999999999999999754  333444455566553

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=6.6e-08  Score=83.09  Aligned_cols=43  Identities=30%  Similarity=0.398  Sum_probs=36.5

Q ss_pred             CccEEEEeccceeecCC------------c-cCcCHHHHHHHHHHCCCeEEEEeCC
Q 019991           29 RFKAWLLDQFGVLHDGK------------K-PYPGAISTLEMLATTGAKMVVISNS   71 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------------~-~ipGa~e~L~~L~~~G~~v~~vTN~   71 (332)
                      +-+.++||.||||....            . ++|++.++|+.|.+.|+.++++||-
T Consensus        20 ~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ   75 (195)
T d1yj5a1          20 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQ   75 (195)
T ss_dssp             CSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEEC
T ss_pred             cCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCc
Confidence            45789999999997532            1 4699999999999999999999993

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.33  E-value=2e-07  Score=75.08  Aligned_cols=44  Identities=27%  Similarity=0.289  Sum_probs=39.5

Q ss_pred             CccEEEEeccceeecC-------------CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           29 RFKAWLLDQFGVLHDG-------------KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g-------------~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      +.++|+||+||||.+.             ..++||+.++++.|+++|+.++++||.+
T Consensus         6 kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1           6 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            5789999999999653             3689999999999999999999999965

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.18  E-value=5.4e-06  Score=70.87  Aligned_cols=59  Identities=17%  Similarity=0.140  Sum_probs=44.5

Q ss_pred             CccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .++.++||+||||.++. .+.+++.++++.|++.|++++++|..+.  .........+|+..
T Consensus         2 miKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~g~~v~~~TGr~~--~~~~~~~~~~~~~~   61 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVI--PVVYALKIFLGING   61 (225)
T ss_dssp             CCCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEECSSCH--HHHHHHHHHHTCCS
T ss_pred             CeEEEEEecCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCch--hhhHHHHHHcCCCc
Confidence            37899999999999766 4678999999999999999999997442  22223334455543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=1.7e-06  Score=75.76  Aligned_cols=61  Identities=16%  Similarity=0.198  Sum_probs=49.6

Q ss_pred             cCccEEEEeccceeecCCcc-CcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           28 RRFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~-ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      |.+|.++||+||||+++..- -|.+.++|++|+++|++++++|..+  .+.+.+.++.+++..+
T Consensus         2 ~~iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~gi~v~i~TGR~--~~~~~~~~~~l~l~~~   63 (271)
T d1rkqa_           2 LAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRP--YAGVHNYLKELHMEQP   63 (271)
T ss_dssp             CCCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSC--GGGTHHHHHHTTCCST
T ss_pred             CCeeEEEEeCCccccCCCCccCHHHHHHHHHHHHCCCEEEEECCCC--HHHHHHHHHHhcCcCC
Confidence            67999999999999987654 4778999999999999999999754  3334566778888765

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.09  E-value=1.1e-06  Score=82.47  Aligned_cols=94  Identities=12%  Similarity=0.080  Sum_probs=68.4

Q ss_pred             cCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHH------------H--hcCcccccCCCCHHHHH
Q 019991          169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE------------K--LGGEVRWMGKPDKLWAT  233 (332)
Q Consensus       169 ~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e------------~--~g~e~~~~GKP~p~if~  233 (332)
                      ..++++.++++.|+++|+++ ++||.........   +...++..+|+            .  ...+....+||+|.+|.
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~i---l~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~  291 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVP---FENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHH---HHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH
Confidence            36789999999999999996 7888766543211   11111222221            1  13455678999999999


Q ss_pred             HHHHHhCC------------------eEEEeCChhhHHHHHHHcCCcEEEE
Q 019991          234 LFTMILRV------------------QMQLESSPYSLLEGSMQLNLDLTVM  266 (332)
Q Consensus       234 ~Al~~lg~------------------~lmIGDs~~~DI~gA~~aG~~ti~~  266 (332)
                      .++...+.                  .+||||++ .|+.+|++||+.+|++
T Consensus       292 ~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~-~D~~aak~Ag~~~Igv  341 (380)
T d1qyia_         292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGT  341 (380)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEE
T ss_pred             HHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCH-HHHHHHHHCCCCEEEE
Confidence            99876532                  58999996 7999999999999998

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.09  E-value=2.1e-05  Score=68.48  Aligned_cols=42  Identities=24%  Similarity=0.293  Sum_probs=36.0

Q ss_pred             cEEEEeccceeecCC--ccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           31 KAWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        31 ~~vlfDlDGvL~~g~--~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      ++++||+||||++..  .+-+...++|++|+++|++++++|..+
T Consensus         2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~gi~v~~~TGR~   45 (260)
T d2rbka1           2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRP   45 (260)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             eEEEEECCCCCcCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            689999999998753  345678899999999999999999865

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=4.2e-06  Score=69.99  Aligned_cols=54  Identities=15%  Similarity=0.029  Sum_probs=37.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCC-hh-HHHHHHHhCCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRR-AS-TTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~-~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .++||+.++|+.|+++|++++++||+... .+ .........|+... |+.++++.+
T Consensus        99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-fd~i~~s~~  154 (225)
T d1zd3a1          99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-FDFLIESCQ  154 (225)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-SSEEEEHHH
T ss_pred             CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-ccEEEeccc
Confidence            45778889999999999999999997643 22 22223344556555 677777654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.91  E-value=9.6e-06  Score=64.22  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=37.3

Q ss_pred             cEEEEeccceeecC-------CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           31 KAWLLDQFGVLHDG-------KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        31 ~~vlfDlDGvL~~g-------~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      +.++||+||||...       ..|++++.+.++.|++.|..+.+.|..+
T Consensus         2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            57999999999663       3699999999999999999999999864

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=9.5e-06  Score=68.83  Aligned_cols=43  Identities=12%  Similarity=0.069  Sum_probs=35.1

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      .++||+.+++++|+++|++++++||+++..  ....++..|+...
T Consensus       127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~--~~~~~~~~~~~~~  169 (253)
T d1zs9a1         127 EFFADVVPAVRKWREAGMKVYIYSSGSVEA--QKLLFGHSTEGDI  169 (253)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSCHHH--HHHHHHTBTTBCC
T ss_pred             ccCCCHHHHHHHHhhccCceeecCCCcHHH--HHHHHHHcCcchh
Confidence            358999999999999999999999987543  3456778888765

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.81  E-value=1.2e-05  Score=63.45  Aligned_cols=57  Identities=18%  Similarity=0.286  Sum_probs=45.4

Q ss_pred             EEEEeccceeecCC-----ccCcCHHHHHHHHHHCCCeEEEEeCCCC-ChhHHHHHHHhCCCC
Q 019991           32 AWLLDQFGVLHDGK-----KPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFD   88 (332)
Q Consensus        32 ~vlfDlDGvL~~g~-----~~ipGa~e~L~~L~~~G~~v~~vTN~s~-~~~~~~~~L~~lGl~   88 (332)
                      .++||+||||....     +|+|++.++|+.|++.|..+++.|..+. ..+...+-|++.|++
T Consensus         2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~   64 (122)
T d2obba1           2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   64 (122)
T ss_dssp             EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             EEEEEcCCCcCCCCCCccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence            58999999997633     6899999999999999999999997553 233445667777776

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.77  E-value=1.2e-05  Score=68.64  Aligned_cols=52  Identities=25%  Similarity=0.369  Sum_probs=41.6

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .++||+.++|++|+ .|++++++||+++  ......++.+|+... |+.++++.+.
T Consensus       100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~--~~~~~~l~~~gl~~~-fd~i~~s~~~  151 (230)
T d1x42a1         100 ELYPEVVEVLKSLK-GKYHVGMITDSDT--EYLMAHLDALGIKDL-FDSITTSEEA  151 (230)
T ss_dssp             CBCTTHHHHHHHHB-TTBEEEEEESSCH--HHHHHHHHHHTCGGG-CSEEEEHHHH
T ss_pred             cccccHHHHHHHhh-ccCceeeeecccc--ccchhhhcccccccc-cccccccccc
Confidence            45799999999996 5799999999753  345667889999887 7888887653

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.73  E-value=0.00047  Score=59.79  Aligned_cols=55  Identities=18%  Similarity=0.172  Sum_probs=40.2

Q ss_pred             ccEEEEeccceeecCCc-cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCC
Q 019991           30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF   87 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~-~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl   87 (332)
                      |+.|+||+||||.+... +-|...++|++|++.| +++++|.  |+...+...+++++.
T Consensus         2 ~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~~-~~~i~TG--R~~~~~~~~~~~~~~   57 (267)
T d1nf2a_           2 YRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRKC-YVVFASG--RMLVSTLNVEKKYFK   57 (267)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTTS-EEEEECS--SCHHHHHHHHHHHSS
T ss_pred             eEEEEEeCCccccCCcCccCHHHHHHHHHHHcCC-EEEEECC--CChHHHHHHHHHhcc
Confidence            78999999999987664 5567788999998654 7888885  444445555655544

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.73  E-value=2e-05  Score=69.02  Aligned_cols=58  Identities=19%  Similarity=0.246  Sum_probs=46.8

Q ss_pred             ccEEEEeccceeecCCccC-cCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           30 FKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~i-pGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.++||+||||++....+ +.+.++|++|+++|++++++|..+  ...+...++.+|+..
T Consensus         1 iKli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~--~~~~~~~~~~l~~~~   59 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRA--HFDVMSIFEPLGIKT   59 (285)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSSC--HHHHHHHHGGGTCCC
T ss_pred             CeEEEEECCccccCCCCccCHHHHHHHHHHHHCCCEEEEECCCC--HHHHHHHHHHhCCCc
Confidence            4689999999999876544 678899999999999999999644  444666777888764

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.4e-05  Score=68.52  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=26.8

Q ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        47 ~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++||+.+++++|+++|++++++|++...  .+...++.+|++.
T Consensus        83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~--~v~~i~~~lgi~~  123 (217)
T d1nnla_          83 LTPGIRELVSRLQERNVQVFLISGGFRS--IVEHVASKLNIPA  123 (217)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHH--HHHHHHHHTTCCG
T ss_pred             cCHHHHHHHHHHHhCCCEEEEECCCchH--HHHHHHHHhCCcc
Confidence            5577777888888888888888865422  2233455677653

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=3e-05  Score=65.21  Aligned_cols=59  Identities=19%  Similarity=0.190  Sum_probs=47.6

Q ss_pred             CccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           29 RFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      +.-.|++|+||||++.. .+.+.+.++|+.|+++|++++++|..+  ...+...++.+|+..
T Consensus         3 ~~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~i~TGR~--~~~~~~~~~~~~~~~   62 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKT--SAEMLYLQKTLGLQG   62 (232)
T ss_dssp             CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEECSSC--HHHHHHHHHHTTCTT
T ss_pred             CCEEEEEECCCCccCCcCcCCHHHHHHHHHHHHCCCEEEEEeCCC--hhhchhHHHHhccCC
Confidence            34478889999999855 467889999999999999999999744  445667778888764

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=97.67  E-value=2e-05  Score=66.18  Aligned_cols=52  Identities=19%  Similarity=0.349  Sum_probs=41.4

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .++|++.++++.+++.|++++++||+...  .....+++.|+... |+.++++.+
T Consensus        93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~--~~~~~~~~~~~~~~-fd~~~~s~~  144 (220)
T d1zrna_          93 APFSEVPDSLRELKRRGLKLAILSNGSPQ--SIDAVVSHAGLRDG-FDHLLSVDP  144 (220)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHTTCGGG-CSEEEESGG
T ss_pred             cccchhHHHHHHHHhcCCeEEeecchHHH--HHHHHHhhcccccc-ccceeeeee
Confidence            35678888999999999999999998643  34456778888887 688888865

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.65  E-value=2.7e-05  Score=66.20  Aligned_cols=57  Identities=21%  Similarity=0.216  Sum_probs=46.6

Q ss_pred             ccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      ++.+++|+||||+++... +...++|++|+++|++++++|..+  ...+...++.+|+..
T Consensus         2 iKli~~DlDGTLl~~~~~-~~~~~ai~~l~~~G~~~~~aTGR~--~~~~~~~~~~~~~~~   58 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGYEP-DPAKPIIEELKDMGFEIIFNSSKT--RAEQEYYRKELEVET   58 (243)
T ss_dssp             EEEEEECCBTTTBSSSCS-GGGHHHHHHHHHTTEEEEEECSSC--HHHHHHHHHHHTCCS
T ss_pred             cEEEEEeCCCCCCCCCCC-HHHHHHHHHHHHCCCEEEEEeCCC--HHHHHHHHHHhcccc
Confidence            689999999999987664 678899999999999999999744  445566677777764

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=2.5e-05  Score=67.98  Aligned_cols=57  Identities=25%  Similarity=0.299  Sum_probs=44.0

Q ss_pred             ccEEEEeccceeecCCccC--cCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCC
Q 019991           30 FKAWLLDQFGVLHDGKKPY--PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD   88 (332)
Q Consensus        30 ~~~vlfDlDGvL~~g~~~i--pGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~   88 (332)
                      ++.++||+||||++....+  |.+.++|++|+++|++++++|..+  ...+...++.+++.
T Consensus         2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~--~~~~~~~~~~l~~~   60 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQ--YYQLISFFPELKDE   60 (269)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEECSSC--HHHHGGGCTTTTTT
T ss_pred             EEEEEEeCCccCcCCCCcCChHHHHHHHHHHHHCCCEEEEEcCCC--HHHHHHHHHHhCcc
Confidence            6899999999998866543  568899999999999999999643  34444455666655

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.46  E-value=6.2e-05  Score=63.64  Aligned_cols=43  Identities=14%  Similarity=0.023  Sum_probs=34.0

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      +++||+.++++.|+++|++++++||+.+.  .+...|+++|+...
T Consensus        75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~--~i~~~l~~l~~~~~  117 (226)
T d2feaa1          75 KIREGFREFVAFINEHEIPFYVISGGMDF--FVYPLLEGIVEKDR  117 (226)
T ss_dssp             CBCTTHHHHHHHHHHHTCCEEEEEEEEHH--HHHHHHTTTSCGGG
T ss_pred             chhHHHHHHHHHHHhcccccccCCcchhh--hHHHHHHHcCCccc
Confidence            58899999999999999999999997542  34455678887543

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.45  E-value=0.00027  Score=55.89  Aligned_cols=95  Identities=9%  Similarity=0.039  Sum_probs=61.1

Q ss_pred             cccCHHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHH---HHHh-cC-------cccccCCCCHHHHHH
Q 019991          167 RPMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK---FEKL-GG-------EVRWMGKPDKLWATL  234 (332)
Q Consensus       167 ~~~~y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~---~e~~-g~-------e~~~~GKP~p~if~~  234 (332)
                      ....|+++.++++.+.++|..+ ++||.........     .-.+...   +... +.       ......+|.+.+-..
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~  108 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDP-----TKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEE  108 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSST-----THHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHH
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHH-----HHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHH
Confidence            3456899999999999999985 7899654322110     0112111   1111 11       122234566667667


Q ss_pred             HHHHhCC-----eEEEeCChhhHHHHHHHcCCcEEEEe
Q 019991          235 FTMILRV-----QMQLESSPYSLLEGSMQLNLDLTVME  267 (332)
Q Consensus       235 Al~~lg~-----~lmIGDs~~~DI~gA~~aG~~ti~~~  267 (332)
                      .++++..     .+||||++ +||++|+++|++++.+.
T Consensus       109 ~l~~~~~~~~~i~~~igD~~-~dv~a~~~~Gi~~~~V~  145 (149)
T d1ltqa1         109 IFWKHIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVA  145 (149)
T ss_dssp             HHHHHTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECS
T ss_pred             HHHHhccCCCceEEEEcCCH-HHHHHHHHCCCcEEEeC
Confidence            7766533     47999995 89999999999999874

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.40  E-value=4.7e-05  Score=66.19  Aligned_cols=44  Identities=20%  Similarity=0.176  Sum_probs=37.9

Q ss_pred             CccEEEEeccceeec-C-CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           29 RFKAWLLDQFGVLHD-G-KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~-g-~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      +++.++||+||||+. . ..+-|.+.++|++|+++|++++++|..+
T Consensus         9 ~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~Gi~v~i~TGR~   54 (283)
T d2b30a1           9 DIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRS   54 (283)
T ss_dssp             CCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred             CccEEEEECCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            688999999999983 3 3566778999999999999999999855

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=8e-05  Score=63.84  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=53.5

Q ss_pred             ccHHHHhhh---cCccEEEEeccceeecCC-----------------------------------ccCcCHHHHHHHHHH
Q 019991           19 NGLRHIAET---RRFKAWLLDQFGVLHDGK-----------------------------------KPYPGAISTLEMLAT   60 (332)
Q Consensus        19 ~~~~~~~~~---~~~~~vlfDlDGvL~~g~-----------------------------------~~ipGa~e~L~~L~~   60 (332)
                      .++.++.+.   ++..+|+||+|-|+.+..                                   .++||+.++++++++
T Consensus        21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~  100 (209)
T d2b82a1          21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR  100 (209)
T ss_dssp             ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred             EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence            355555542   123499999999999852                                   267899999999999


Q ss_pred             CCCeEEEEeCCCC-ChhHHHHHHH-hCCCCcc
Q 019991           61 TGAKMVVISNSSR-RASTTIDKLK-SLGFDPS   90 (332)
Q Consensus        61 ~G~~v~~vTN~s~-~~~~~~~~L~-~lGl~~~   90 (332)
                      +|.+++++||.+. ..+...+.|+ .+|++..
T Consensus       101 ~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~  132 (209)
T d2b82a1         101 RGDAIFFVTGRSPTKTETVSKTLADNFHIPAT  132 (209)
T ss_dssp             HTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred             cCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence            9999999999763 3445566675 4888754

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.30  E-value=0.00017  Score=60.18  Aligned_cols=106  Identities=16%  Similarity=0.207  Sum_probs=72.7

Q ss_pred             CccEEEEeccceeecCCccCcCH-----------HHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccc
Q 019991           29 RFKAWLLDQFGVLHDGKKPYPGA-----------ISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT   97 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~~~ipGa-----------~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iit   97 (332)
                      +++.++||+||||.+|.-.+..-           ...++.|++.|+.++++|...  ...+..+.+.+++... +.....
T Consensus         4 ~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~gi~~~iis~~~--~~~v~~~~~~l~~~~~-~~~~~~   80 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRD--SPILRRRIADLGIKLF-FLGKLE   80 (177)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCC--CHHHHHHHHHHTCCEE-EESCSC
T ss_pred             cCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhhhcEEEEEecCCc--hhHHHHHHhhhccccc-cccccc
Confidence            68999999999999875433321           236889999999999999643  3445677788888765 455556


Q ss_pred             cHHHHHHHHhhcCChhhhhcCCeEEEeecCcccchhhhcCCcccc
Q 019991           98 SGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVV  142 (332)
Q Consensus        98 s~~v~~~~L~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~~~~  142 (332)
                      .......++.+.+.+     ...+..+|.+.-....|+..|+...
T Consensus        81 K~~~l~~~~~~~~i~-----~~~v~~vGDd~nDl~~l~~~g~sia  120 (177)
T d1k1ea_          81 KETACFDLMKQAGVT-----AEQTAYIGDDSVDLPAFAACGTSFA  120 (177)
T ss_dssp             HHHHHHHHHHHHTCC-----GGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HHHHHHHHHHHhcCC-----cceeEEecCCccHHHHHhhCCeEEE
Confidence            555555666555432     1467677876655556777776443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.17  E-value=0.00026  Score=58.69  Aligned_cols=87  Identities=16%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH---------HHHHHhhcCChhh
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL---------THQYLLRRDDAWF  114 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v---------~~~~L~~~~~~~~  114 (332)
                      ...++||+.++|+.|+++|++++++||+++.   ..+.|+++|+... |+.++++.+.         ....+++.+.+  
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~---~~~~l~~~gl~~~-f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~--  153 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN---AFTILKDLGVESY-FTEILTSQSGFVRKPSPEAATYLLDKYQLN--  153 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH---HHHHHHHHTCGGG-EEEEECGGGCCCCTTSSHHHHHHHHHHTCC--
T ss_pred             cCcccchHHhhhhcccccccchhhhcccchh---hhhhhhhcccccc-cccccccccccccchhHHHHHHHHHHhCCC--
Confidence            4578999999999999999999999997542   3456899999988 7888876422         22233333211  


Q ss_pred             hhcCCeEEEeecCcccchhhhcCCc
Q 019991          115 AALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       115 ~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                         ..+++++|.+..+....+..|+
T Consensus       154 ---p~~~l~VgD~~~Di~~A~~~G~  175 (204)
T d2go7a1         154 ---SDNTYYIGDRTLDVEFAQNSGI  175 (204)
T ss_dssp             ---GGGEEEEESSHHHHHHHHHHTC
T ss_pred             ---CceEEEEeCCHHHHHHHHHcCC
Confidence               1467777765443333444554

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.16  E-value=0.00066  Score=55.69  Aligned_cols=53  Identities=17%  Similarity=0.321  Sum_probs=44.1

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|++|+++|++++++||++.   ...+.|+++|+... |+.++++.+
T Consensus        77 ~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~---~~~~~l~~~~l~~~-fd~i~~~~~  129 (187)
T d2fi1a1          77 HPILFEGVSDLLEDISNQGGRHFLVSHRND---QVLEILEKTSIAAY-FTEVVTSSS  129 (187)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEECSSCT---HHHHHHHHTTCGGG-EEEEECGGG
T ss_pred             cCcccchhHHHHHHHHhhhccccccccCcc---chhhhhhhhccccc-ccccccccc
Confidence            447889999999999999999999999653   34467899999987 788888764

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00018  Score=60.38  Aligned_cols=42  Identities=21%  Similarity=0.090  Sum_probs=34.3

Q ss_pred             CccEEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeCC
Q 019991           29 RFKAWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNS   71 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN~   71 (332)
                      ..+.++||+||||++.. .+-|...++|++|++.|+ ++++|..
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~g~-~~i~Tgr   44 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIK-IGVVGGS   44 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTTSE-EEEECSS
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHHHcCCC-EEEEcCC
Confidence            36789999999999755 566888999999998884 6788754

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.93  E-value=0.0026  Score=50.34  Aligned_cols=100  Identities=18%  Similarity=0.193  Sum_probs=65.8

Q ss_pred             CccEEEEeccceeecCC--ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYL  106 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~--~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~~~~L  106 (332)
                      +...++||.+|++..+.  ++-|++.+.++.|++.|+++.++|.....  .....-+.+|++.. |.. .++.+- ..++
T Consensus         2 ~~~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~--~a~~ia~~lgI~~v-~~~-~~p~~k-~~~v   76 (135)
T d2b8ea1           2 KVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR--SAEAISRELNLDLV-IAE-VLPHQK-SEEV   76 (135)
T ss_dssp             HCCEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHTCSEE-ECS-CCHHHH-HHHH
T ss_pred             eEEEEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchh--hhhHHHhhhhhhhh-ccc-cchhHH-HHHH
Confidence            35689999999998875  58999999999999999999999964322  22233366898765 333 333332 3344


Q ss_pred             hhcCChhhhhcCCeEEEeecCcccchhhhcCCc
Q 019991          107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       107 ~~~~~~~~~~~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                      ++...      |..+..+|.+......|+..++
T Consensus        77 ~~~q~------~~~v~~vGDg~nD~~aL~~Adv  103 (135)
T d2b8ea1          77 KKLQA------KEVVAFVGDGINDAPALAQADL  103 (135)
T ss_dssp             HHHTT------TSCEEEEECSSSSHHHHHHSSE
T ss_pred             HHHHc------CCEEEEEeCCCCcHHHHHhCCe
Confidence            44332      4566667765544445665543

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=96.87  E-value=0.0001  Score=62.20  Aligned_cols=86  Identities=9%  Similarity=-0.014  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHHHH----h--------c--CcccccCCCCHHHHHHHH
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK----L--------G--GEVRWMGKPDKLWATLFT  236 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~e~----~--------g--~e~~~~GKP~p~if~~Al  236 (332)
                      +++.+.++.|.++|.++ ++||........   .+....+...+-.    .        +  ..+...+||+|.....++
T Consensus        78 pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~---~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~  154 (226)
T d2feaa1          78 EGFREFVAFINEHEIPFYVISGGMDFFVYP---LLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVI  154 (226)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEEEEEHHHHHH---HHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHH
T ss_pred             HHHHHHHHHHHhcccccccCCcchhhhHHH---HHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHH
Confidence            56788888888889885 677754443221   1222112222100    0        0  123445688899999999


Q ss_pred             HHhCC----eEEEeCChhhHHHHHHHcCC
Q 019991          237 MILRV----QMQLESSPYSLLEGSMQLNL  261 (332)
Q Consensus       237 ~~lg~----~lmIGDs~~~DI~gA~~aG~  261 (332)
                      +++++    .+||||+ .+|+.+|++||+
T Consensus       155 ~~~~~~~~~~i~iGDs-~~Dl~~a~~A~~  182 (226)
T d2feaa1         155 HELSEPNQYIIMIGDS-VTDVEAAKLSDL  182 (226)
T ss_dssp             HHHCCTTCEEEEEECC-GGGHHHHHTCSE
T ss_pred             HHhcCCCceEEEEeCc-hhhHHHHHHCCE
Confidence            99987    6999999 589999999996

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.00039  Score=57.97  Aligned_cols=53  Identities=15%  Similarity=0.197  Sum_probs=44.7

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ..++||+.++|+.|+++|++++++||+++.  .....++.+|+... |+.++++.+
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~--~~~~~l~~~~l~~~-F~~i~~~~~  139 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLH--MLEKVLTMFDLRDS-FDALASAEK  139 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHH--HHHHHHHHTTCGGG-CSEEEECTT
T ss_pred             ccccchHHHHHHHhhhcccccccccccccc--cccccccccccccc-ccccccccc
Confidence            357899999999999999999999997643  35677899999887 788888864

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00083  Score=55.89  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=30.3

Q ss_pred             EEEEeccceeecCC-ccCcCHHHHHHHHHHCCCeEEEEeC
Q 019991           32 AWLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISN   70 (332)
Q Consensus        32 ~vlfDlDGvL~~g~-~~ipGa~e~L~~L~~~G~~v~~vTN   70 (332)
                      .++||+||||++.. .+-|...++|++|++.|+ ++++|.
T Consensus         3 i~lFDlDGTLl~~~~~is~~~~~~i~~l~~~g~-~~i~tg   41 (244)
T d2fuea1           3 LCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQ-IGVVGG   41 (244)
T ss_dssp             EEEEESBTTTBSTTSCCCHHHHHHHHHHTTTSE-EEEECS
T ss_pred             EEEEccccCccCCCCcCCHHHHHHHHHHHhCCC-EEEEec
Confidence            35689999999876 456888899999999995 556664

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.43  E-value=0.00058  Score=58.19  Aligned_cols=60  Identities=8%  Similarity=-0.030  Sum_probs=40.4

Q ss_pred             cCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      |+.-.+++|+||||++....++ ....+.++++.|++++++|..+  ...+.+.++.+++..+
T Consensus         1 m~~~li~~DlDGTL~~~~~~~~-~~~~~~~~~~~g~~v~i~TGR~--~~~~~~~~~~~~~~~~   60 (244)
T d1s2oa1           1 MRQLLLISDLDNTWVGDQQALE-HLQEYLGDRRGNFYLAYATGRS--YHSARELQKQVGLMEP   60 (244)
T ss_dssp             CCSEEEEECTBTTTBSCHHHHH-HHHHHHHTTGGGEEEEEECSSC--HHHHHHHHHHHTCCCC
T ss_pred             CCceEEEEECcccCCCCCCCHH-HHHHHHHHHcCCCEEEEECCCC--HHHHHHHHHHcCCCCC
Confidence            3455788999999998765432 3344555677888888888643  4445566677777643

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=96.42  E-value=0.0011  Score=54.88  Aligned_cols=54  Identities=24%  Similarity=0.389  Sum_probs=44.9

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ...++||+.++|++|++.|++++++||+++.  .....|+++|+... |+.++++.+
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~--~~~~~l~~~gl~~~-f~~~~~~~~  146 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTK--HVQPILTAFGIDHL-FSEMLGGQS  146 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHTTCGGG-CSEEECTTT
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHH--HHHHHHHhcCchhh-ccccccccc
Confidence            4468999999999999999999999998653  35567899999887 688887753

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.26  E-value=0.0012  Score=54.68  Aligned_cols=40  Identities=20%  Similarity=0.159  Sum_probs=31.3

Q ss_pred             EEEEeccceeecC------CccCcCHHHHHHHHHHCCCeEEEEeCCC
Q 019991           32 AWLLDQFGVLHDG------KKPYPGAISTLEMLATTGAKMVVISNSS   72 (332)
Q Consensus        32 ~vlfDlDGvL~~g------~~~ipGa~e~L~~L~~~G~~v~~vTN~s   72 (332)
                      .++||+||||.+.      ..+-|.+.++|+.|++ +.+++++|..+
T Consensus         2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~-~~~v~i~TGR~   47 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE-RFDTYIVTGRS   47 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH-HSEEEEECSSC
T ss_pred             EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh-CCCEEEEcCCC
Confidence            5899999999852      2466788899999987 56788888643

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.11  E-value=0.014  Score=47.57  Aligned_cols=58  Identities=14%  Similarity=0.324  Sum_probs=46.1

Q ss_pred             cEEEEeccceeecC--CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCcc
Q 019991           31 KAWLLDQFGVLHDG--KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS   90 (332)
Q Consensus        31 ~~vlfDlDGvL~~g--~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~   90 (332)
                      ..+++|..|+++-.  .++.|++.++|+.|++.|+++.++|.....+  ....-+++|+...
T Consensus         3 ~~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~t--A~~ia~~~Gi~~~   62 (168)
T d1wpga2           3 SVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGT--AIAICRRIGIFGE   62 (168)
T ss_dssp             CEEEECCTTTTBCCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH--HHHHHHHTTSSCT
T ss_pred             EEEEECCccEEEEEecCCCchhHHHHHHHHHHCcCEEEEECCCCHHH--HHHHHHHcCCCCC
Confidence            36889999999988  6799999999999999999999999864322  2233356888544

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.04  E-value=0.0017  Score=54.36  Aligned_cols=52  Identities=17%  Similarity=0.179  Sum_probs=43.0

Q ss_pred             CccCcCHHHHHHHHHHCC-CeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           45 KKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G-~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ..++||+.++|+.|++.| ++++++||+++.  .....|+.+|+... |+.+++++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~--~~~~~l~~~gl~~~-fd~i~~~~  142 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEA--SGRHKLKLPGIDHY-FPFGAFAD  142 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHH--HHHHHHHTTTCSTT-CSCEECTT
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcch--hhhhhhhhhccccc-cccccccc
Confidence            367899999999999987 899999998643  35577899999988 68777765

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=96.00  E-value=0.0014  Score=56.10  Aligned_cols=56  Identities=14%  Similarity=0.065  Sum_probs=42.2

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|++|+++|++++++||+++.  .....|+.+|+....++.++++.+
T Consensus        96 ~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~--~~~~~l~~~~l~~~f~d~~~~~d~  151 (257)
T d1swva_          96 RYASPINGVKEVIASLRERGIKIGSTTGYTRE--MMDIVAKEAALQGYKPDFLVTPDD  151 (257)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHH--HHHHHHHHHHHTTCCCSCCBCGGG
T ss_pred             ccCccCCcHHHHHHHHHhcccceeecCCCchh--hHHHHHHHHhhccccccccccccc
Confidence            34578999999999999999999999997653  244567777777652255666654

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.86  E-value=0.0042  Score=50.39  Aligned_cols=43  Identities=5%  Similarity=-0.054  Sum_probs=31.4

Q ss_pred             CCCCHHHHHHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          225 GKPDKLWATLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       225 GKP~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      ++|.+......++++++    +++|||+ .+|+.+++.+|+.. .+|-.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~i~iGDs-~nDi~m~~~ag~~v-a~na~  186 (210)
T d1j97a_         140 ENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKAGLKI-AFCAK  186 (210)
T ss_dssp             TTHHHHHHHHHHHHHTCCGGGEEEEESS-GGGHHHHHHCSEEE-EESCC
T ss_pred             cccccchhhhHHHHhcccccceEEecCC-cChHHHHHHCCCCE-EECCC
Confidence            44555556666666666    6899999 58999999999854 44643

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=95.64  E-value=0.0014  Score=54.21  Aligned_cols=56  Identities=21%  Similarity=0.336  Sum_probs=44.5

Q ss_pred             eecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        41 L~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      .+...+++||+.++|++|++ +++++++||+.+  ......++++|+... |+.++++.+
T Consensus        77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~--~~~~~~l~~~~l~~~-f~~i~~~~~  132 (207)
T d2hdoa1          77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRR--NELESGMRSYPFMMR-MAVTISADD  132 (207)
T ss_dssp             CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCH--HHHHHHHTTSGGGGG-EEEEECGGG
T ss_pred             cccccccccchhhhhhhhcc-cccccccccccc--ccccccccccccccc-ccccccccc
Confidence            34556899999999999975 799999999754  345678899999887 688877754

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=95.22  E-value=0.012  Score=48.40  Aligned_cols=84  Identities=19%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHHH---------HHHHhhcCChhhhh
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT---------HQYLLRRDDAWFAA  116 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v~---------~~~L~~~~~~~~~~  116 (332)
                      .++||+.++|+.|++.|++++++||+..    ....++..|+... |+.++++.+..         ...+++.+.+    
T Consensus        91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~----~~~~l~~~~l~~~-f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~----  161 (221)
T d1o08a_          91 DVYPGILQLLKDLRSNKIKIALASASKN----GPFLLERMNLTGY-FDAIADPAEVAASKPAPDIFIAAAHAVGVA----  161 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCSCTT----HHHHHHHTTCGGG-CSEECCTTTSSSCTTSTHHHHHHHHHTTCC----
T ss_pred             cccCCceeccccccccccceEEEeecch----hhHHHHhhccccc-cccccccccccccccChHHHHHHHHHcCCC----
Confidence            5899999999999999999999998643    2356788999887 67777765432         2223333221    


Q ss_pred             cCCeEEEeecCcccchhhhcCCc
Q 019991          117 LGRSCIHMTWSDRGAISLEGLGL  139 (332)
Q Consensus       117 ~G~~v~~~g~~~~~~~~l~~~g~  139 (332)
                       ..+++++|.+..+....+..|+
T Consensus       162 -~~~~l~VgD~~~di~~A~~aG~  183 (221)
T d1o08a_         162 -PSESIGLEDSQAGIQAIKDSGA  183 (221)
T ss_dssp             -GGGEEEEESSHHHHHHHHHHTC
T ss_pred             -CceEEEEecCHHHHHHHHHcCC
Confidence             2457777765433334445555

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.033  Score=47.01  Aligned_cols=88  Identities=7%  Similarity=0.054  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHhCCCcE-EEecCCccceeccceecCCChhHHHH-HHhcC-----ccc--ccCCCCHHHHHHHHHHhCCe
Q 019991          172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EKLGG-----EVR--WMGKPDKLWATLFTMILRVQ  242 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~G~i~~~~-e~~g~-----e~~--~~GKP~p~if~~Al~~lg~~  242 (332)
                      ++..+.++++.++|+++ ++||.+.....         ...+-+ +..|-     ...  .-++|+..--...++++++.
T Consensus        89 pga~~fl~~~~~~Gv~IfyVTnR~~~~~e---------~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I~  159 (209)
T d2b82a1          89 EVARQLIDMHVRRGDAIFFVTGRSPTKTE---------TVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIR  159 (209)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECSCCCSSC---------CHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTEE
T ss_pred             hhHHHHHHHHHHcCCeEEEEeCCchhhHH---------HHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCeE
Confidence            67888999988999984 78996543111         122222 22221     111  22334444445555779999


Q ss_pred             EEEeCChhhHHHHHHHcCCcEEEEecc
Q 019991          243 MQLESSPYSLLEGSMQLNLDLTVMEKL  269 (332)
Q Consensus       243 lmIGDs~~~DI~gA~~aG~~ti~~~~~  269 (332)
                      +++||++ +|+.+|.++|++.|-+-+.
T Consensus       160 l~~GD~l-~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         160 IFYGDSD-NDITAARDVGARGIRILRA  185 (209)
T ss_dssp             EEEESSH-HHHHHHHHTTCEEEECCCC
T ss_pred             EEecCCH-HHHhHHHHcCCCceEeecc
Confidence            9999995 8999999999999987443

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.49  E-value=0.0097  Score=49.99  Aligned_cols=54  Identities=17%  Similarity=0.281  Sum_probs=43.1

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ....++||+.++|+.|+ +|++++++||++.  ......++..|+... |+.++++.+
T Consensus       106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~--~~~~~~l~~~gl~~~-fd~i~~s~~  159 (247)
T d2gfha1         106 QHMILADDVKAMLTELR-KEVRLLLLTNGDR--QTQREKIEACACQSY-FDAIVIGGE  159 (247)
T ss_dssp             HTCCCCHHHHHHHHHHH-TTSEEEEEECSCH--HHHHHHHHHHTCGGG-CSEEEEGGG
T ss_pred             ccCccCccHHHHHHHhh-cccceEEeecccc--hhhhhhhhhcccccc-ccccccccc
Confidence            44578999999999998 5899999999754  234567888999887 788888754

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.015  Score=47.76  Aligned_cols=53  Identities=17%  Similarity=0.102  Sum_probs=40.9

Q ss_pred             CccEEEEeccceeecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEeCCCCC-hhHHHHHH
Q 019991           29 RFKAWLLDQFGVLHDGK------------------------KPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKL   82 (332)
Q Consensus        29 ~~~~vlfDlDGvL~~g~------------------------~~ipGa~e~L~~L~~~G~~v~~vTN~s~~-~~~~~~~L   82 (332)
                      +..++++|+|+||+.+.                        ..-||+.+||+++.+. +.+++.|.+++. .+.+.+.+
T Consensus        14 ~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~l   91 (181)
T d1ta0a_          14 DKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL   91 (181)
T ss_dssp             TSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHh
Confidence            45699999999999743                        2489999999999865 899999988753 33444444

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.055  Score=44.16  Aligned_cols=31  Identities=16%  Similarity=0.347  Sum_probs=24.8

Q ss_pred             ecCCccCcCHHHHHHHHHHCCC-eEEEEeCCC
Q 019991           42 HDGKKPYPGAISTLEMLATTGA-KMVVISNSS   72 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~-~v~~vTN~s   72 (332)
                      +...+++|||.++++.|++.|. .+.++|..+
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            3445889999999999998664 688888865

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.38  E-value=0.0064  Score=49.15  Aligned_cols=38  Identities=5%  Similarity=-0.017  Sum_probs=27.0

Q ss_pred             HHHHHHhCC----eEEEeCChhhHHHHHHHcCCcEEEEecchhh
Q 019991          233 TLFTMILRV----QMQLESSPYSLLEGSMQLNLDLTVMEKLQIY  272 (332)
Q Consensus       233 ~~Al~~lg~----~lmIGDs~~~DI~gA~~aG~~ti~~~~~~~~  272 (332)
                      ...++.+++    +++|||+ .+|+.+.+.||+--. +|..+..
T Consensus       135 ~~~~~~~~i~~~eviaiGDg-~NDi~Ml~~Ag~gIA-mna~~~v  176 (206)
T d1rkua_         135 RQSVIAFKSLYYRVIAAGDS-YNDTTMLSEAHAGIL-FHAPENV  176 (206)
T ss_dssp             HHHHHHHHHTTCEEEEEECS-STTHHHHHHSSEEEE-ESCCHHH
T ss_pred             HHHHHHhcccccceEEecCC-ccCHHHHHhCCccEE-ECCCHHH
Confidence            334444444    6899999 689999999998654 5765443

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.31  E-value=0.022  Score=46.64  Aligned_cols=59  Identities=10%  Similarity=0.027  Sum_probs=44.6

Q ss_pred             ecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCCh--hHHHHHHHhCCCCccccccccccHHH
Q 019991           42 HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA--STTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        42 ~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~--~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      .....++||+.++|+.|+++|++++++||+....  ......+...|+... |+.++++.++
T Consensus        93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-fd~i~~s~~~  153 (222)
T d1cr6a1          93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-FDFLIESCQV  153 (222)
T ss_dssp             HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-CSEEEEHHHH
T ss_pred             HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-hceeeehhhc
Confidence            4456889999999999999999999999976422  223344566778777 6888887653

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.01  E-value=0.034  Score=45.15  Aligned_cols=53  Identities=23%  Similarity=0.292  Sum_probs=41.4

Q ss_pred             cCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        43 ~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      ....++||+.++++.|+..+ +++++||+++.  .....++.+|+... |+.++++.
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~--~~~~~l~~~gl~~~-fd~v~~~~  133 (210)
T d2ah5a1          81 YEAQLFPQIIDLLEELSSSY-PLYITTTKDTS--TAQDMAKNLEIHHF-FDGIYGSS  133 (210)
T ss_dssp             GSCEECTTHHHHHHHHHTTS-CEEEEEEEEHH--HHHHHHHHTTCGGG-CSEEEEEC
T ss_pred             hcccchhHHHHHHhhhhccc-chhhcccccch--hhhHHHHhhccccc-cccccccc
Confidence            45578999999999998765 89999998643  34567899999987 67777643

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=92.65  E-value=0.034  Score=50.76  Aligned_cols=62  Identities=18%  Similarity=0.234  Sum_probs=45.6

Q ss_pred             ceeecCCc--cCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccc--cccccHHHHH
Q 019991           39 GVLHDGKK--PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFA--GAITSGELTH  103 (332)
Q Consensus        39 GvL~~g~~--~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~--~Iits~~v~~  103 (332)
                      |-+++...  |.||+.++|+.|+++|++++++||.++.  .....++++|+... |+  .+++..++..
T Consensus       206 g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~--~a~~il~~lgl~~~-F~~~~i~~~~d~~~  271 (380)
T d1qyia_         206 GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT--ETVVPFENLGLLPY-FEADFIATASDVLE  271 (380)
T ss_dssp             CTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHH--HHHHHHHHHTCGGG-SCGGGEECHHHHHH
T ss_pred             ccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHH--HHHHHHHHcCCccc-CCcceEEecchhhh
Confidence            44444443  5679999999999999999999997653  34567889999865 43  4667666554

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.014  Score=48.94  Aligned_cols=94  Identities=7%  Similarity=0.061  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHhCCCcE-EEecCCccceeccceecCC--C-hhHHHHHHh-cC--------cccccCCCCHHHHHHHHH
Q 019991          171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP--G-TLASKFEKL-GG--------EVRWMGKPDKLWATLFTM  237 (332)
Q Consensus       171 y~~l~~~l~~l~~~g~~l-IaTN~D~~~~~~~~~~l~~--G-~i~~~~e~~-g~--------e~~~~GKP~p~if~~Al~  237 (332)
                      ++++.++++.|+++|.++ |+|+.-......-...++-  . .++..++.. .+        .+..-++....+.....+
T Consensus        84 ~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~  163 (217)
T d1nnla_          84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKE  163 (217)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHh
Confidence            367899999999999986 5665433222110000110  0 000001100 11        111222223455566666


Q ss_pred             HhCC--eEEEeCChhhHHHHHHHcCCcEEE
Q 019991          238 ILRV--QMQLESSPYSLLEGSMQLNLDLTV  265 (332)
Q Consensus       238 ~lg~--~lmIGDs~~~DI~gA~~aG~~ti~  265 (332)
                      +++.  .++|||+ .+|+.+++.+|+..++
T Consensus       164 ~~~~~~~~~vGDs-~~Di~~~~~ag~~va~  192 (217)
T d1nnla_         164 KFHFKKIIMIGDG-ATDMEACPPADAFIGF  192 (217)
T ss_dssp             HHCCSCEEEEESS-HHHHTTTTTSSEEEEE
T ss_pred             ccCccccEEEEeC-HhhHHHHHhCCceEEE
Confidence            6665  6999999 5899999999986443

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.65  E-value=0.11  Score=41.46  Aligned_cols=18  Identities=22%  Similarity=0.226  Sum_probs=16.2

Q ss_pred             cCccEEEEeccceeecCC
Q 019991           28 RRFKAWLLDQFGVLHDGK   45 (332)
Q Consensus        28 ~~~~~vlfDlDGvL~~g~   45 (332)
                      ++++.++||+||||.++.
T Consensus         2 ~kkKlv~FDlDGTL~d~e   19 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNE   19 (210)
T ss_dssp             CCCCEEEECCCCCCBSSC
T ss_pred             CCCeEEEEeCCCCcCCch
Confidence            578999999999999885

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.48  E-value=0.09  Score=46.36  Aligned_cols=42  Identities=12%  Similarity=0.097  Sum_probs=30.5

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCc
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP   89 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~   89 (332)
                      .+-||+.++++.|++.|+|++++|.+-..  -+...++++|+..
T Consensus       135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~--~ie~vl~~lg~~~  176 (291)
T d2bdua1         135 MLKEGYENFFGKLQQHGIPVFIFSAGIGD--VLEEVIRQAGVYH  176 (291)
T ss_dssp             CBCBTHHHHHHHHHHHTCCEEEEEEEEHH--HHHHHHHHTTCCB
T ss_pred             CcccCHHHHHHHHHHcCCeEEEEcCChHH--HHHHHHHHcCCCc
Confidence            45789999999999999999999975422  2344556677753

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=87.03  E-value=0.062  Score=50.39  Aligned_cols=95  Identities=16%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHhCCCc-EEEecCCccceeccc-eecC----CC-hhHHHHHHh--c-Cccc-------------------
Q 019991          172 QDLEKILEICASKKIP-MVVANPDYVTVEARA-LRVM----PG-TLASKFEKL--G-GEVR-------------------  222 (332)
Q Consensus       172 ~~l~~~l~~l~~~g~~-lIaTN~D~~~~~~~~-~~l~----~G-~i~~~~e~~--g-~e~~-------------------  222 (332)
                      +++...|+.+++.|.+ ++.||++..+..... ..++    .| .+..+|+.+  + ++|.                   
T Consensus       188 ~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l~  267 (458)
T d2bdea1         188 KEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMT  267 (458)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCCEE
T ss_pred             hhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCccc
Confidence            4577778888888887 589999988753221 0111    12 355555542  1 1110                   


Q ss_pred             ccC---CC------CHHHHHHHHHHhCC----eEEEeCChhhHHHHHHH-cCCcEEEE-ecc
Q 019991          223 WMG---KP------DKLWATLFTMILRV----QMQLESSPYSLLEGSMQ-LNLDLTVM-EKL  269 (332)
Q Consensus       223 ~~G---KP------~p~if~~Al~~lg~----~lmIGDs~~~DI~gA~~-aG~~ti~~-~~~  269 (332)
                      ...   ||      +-..+   .+.+|.    .++|||.+.+||.-++. .||+|++| +++
T Consensus       268 ~~~~~~~~~vY~gGn~~~l---~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  326 (458)
T d2bdea1         268 NVHGPIVPGVYQGGNAKKF---TEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  326 (458)
T ss_dssp             ECCSCCCSEEEEECCHHHH---HHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred             cCCccccCCccccCCHHHH---HHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence            000   11      22233   344454    69999999999998865 89999998 554

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=86.97  E-value=0.22  Score=40.80  Aligned_cols=53  Identities=26%  Similarity=0.350  Sum_probs=41.3

Q ss_pred             CCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHHH
Q 019991           44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL  101 (332)
Q Consensus        44 g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~v  101 (332)
                      ...++|++.+.|++|+  ++.+.++||++...  ....+++.|+... |+.++++.++
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~--~~~~~~~~~~~~~-fd~v~~s~~~  143 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDM--LQALVANAGLTDS-FDAVISVDAK  143 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHH--HHHHHHHTTCGGG-CSEEEEGGGG
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHH--HHHHHhhcccccc-cccccccccc
Confidence            4578999999999885  78899999986532  4466788999887 7888888653

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=84.84  E-value=0.14  Score=39.85  Aligned_cols=52  Identities=21%  Similarity=0.222  Sum_probs=35.9

Q ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhC-CCCccccccccccHH
Q 019991           46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL-GFDPSLFAGAITSGE  100 (332)
Q Consensus        46 ~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~l-Gl~~~~f~~Iits~~  100 (332)
                      .+.+|+.+++..++..|++++++||++.....  ..+... |+... |+.++++++
T Consensus        84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~--~~~~~~~~l~~~-fd~v~~s~~  136 (197)
T d2b0ca1          84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT--FWPEEYPEIRDA-ADHIYLSQD  136 (197)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCTTS--CCGGGCHHHHHH-CSEEEEHHH
T ss_pred             ccCchhHHHHHHHHhcCCeEEEEeCccHHHHH--HHHHHcccchhh-ccceeeccc
Confidence            57899999999999999999999998753211  122232 44444 566676543

>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.67  E-value=0.66  Score=33.88  Aligned_cols=79  Identities=11%  Similarity=0.123  Sum_probs=56.7

Q ss_pred             cHHHHhhhcCccEEEEeccceeecCCccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccH
Q 019991           20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG   99 (332)
Q Consensus        20 ~~~~~~~~~~~~~vlfDlDGvL~~g~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~   99 (332)
                      .+.+.++....+.+++|+-+|-+-+..-+.-..++.+.++++|.++.+.- -   ++.+.+.|+..|+... + .++.+.
T Consensus        32 ~l~~~~~~~~~~~iilDls~v~~iDssg~~~L~~~~~~~~~~g~~l~l~~-~---~~~v~~~l~~~gl~~~-~-~i~~~~  105 (115)
T d1th8b_          32 QVTDVLENRAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMVVCA-V---SPAVKRLFDMSGLFKI-I-RVEADE  105 (115)
T ss_dssp             HHHHHHHSSCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEEEES-C---CHHHHHHHHHHTGGGT-S-EEESSH
T ss_pred             HHHHHHhcCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCEEEEEE-C---CHHHHHHHHHcCCCce-e-EEeCCH
Confidence            45555552357899999999999988888778888999999998865554 2   3456778899998754 3 455555


Q ss_pred             HHHHH
Q 019991          100 ELTHQ  104 (332)
Q Consensus       100 ~v~~~  104 (332)
                      +.+.+
T Consensus       106 ~~Al~  110 (115)
T d1th8b_         106 QFALQ  110 (115)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.41  E-value=0.98  Score=36.17  Aligned_cols=50  Identities=30%  Similarity=0.272  Sum_probs=36.2

Q ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCCChhHHHHHHHhCCCCccccccccccHH
Q 019991           45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE  100 (332)
Q Consensus        45 ~~~ipGa~e~L~~L~~~G~~v~~vTN~s~~~~~~~~~L~~lGl~~~~f~~Iits~~  100 (332)
                      ..++||+.++|+.|   +.+.+++||+++.  .....|+.+|+... |+.++.+.+
T Consensus        84 ~~~~~g~~~~L~~l---~~~~~i~t~~~~~--~~~~~l~~~~l~~~-f~~~~~~~~  133 (222)
T d2fdra1          84 VKIIDGVKFALSRL---TTPRCICSNSSSH--RLDMMLTKVGLKPY-FAPHIYSAK  133 (222)
T ss_dssp             CCBCTTHHHHHHHC---CSCEEEEESSCHH--HHHHHHHHTTCGGG-TTTCEEEHH
T ss_pred             cchhhhHHHHhhhc---cccceeeeecchh--hhhhhhcccccccc-cceeecccc
Confidence            57788888887766   4567899987643  35567899999987 676665543