Citrus Sinensis ID: 020003

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
cccccccccccccccEEEEEEccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEcccccccccccccccHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcccccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHHccccccccccccEEEcc
cccHccccccccccEEEEEEEEccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHcccccEEEEccccccEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
mdwdnlgfgltpadymytmkcsndyfekgrlsrygkielspssgvlnygQGLFEGMKAYRKedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscnifilkgniistpatsgtilaGITRKSIIEIASdcgfqveeraipvdelleadevfcTGTAVvvapvgsityrgkriefktgaqSVSRELYSTLVGIQtglikdnkgwtvein
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKielspssgvLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKgniistpatsgtILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVvvapvgsityrgkriefktgaqsvsrELYSTLVgiqtglikdnkgwtvein
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
***DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTV***
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query332 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 1.0 0.855 0.756 1e-153
Q9M401413 Branched-chain-amino-acid no no 1.0 0.803 0.683 1e-139
Q9FYA6415 Branched-chain-amino-acid no no 1.0 0.8 0.673 1e-138
Q93Y32384 Branched-chain-amino-acid no no 0.996 0.861 0.671 1e-130
Q9LPM9356 Branched-chain-amino-acid no no 0.996 0.929 0.603 1e-124
Q9LPM8367 Putative branched-chain-a no no 0.996 0.901 0.606 1e-122
Q9LE06354 Methionine aminotransfera no no 0.996 0.935 0.543 1e-112
P39576363 Branched-chain-amino-acid yes no 0.993 0.909 0.405 1e-72
O31461356 Branched-chain-amino-acid no no 0.993 0.926 0.427 6e-70
Q6GJB4358 Probable branched-chain-a yes no 0.984 0.913 0.406 2e-67
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  540 bits (1391), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 252/333 (75%), Positives = 298/333 (89%), Gaps = 1/333 (0%)

Query: 1   MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAY 59
           +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG KAY
Sbjct: 56  LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAY 115

Query: 60  RKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLY 119
           RKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+LY
Sbjct: 116 RKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLY 175

Query: 120 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 179
           IRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAGGVK
Sbjct: 176 IRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVK 235

Query: 180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTIL 239
           +I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  ISTPAT+GTIL
Sbjct: 236 SITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTIL 295

Query: 240 AGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFK 299
            GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+ITY+ KR+E+K
Sbjct: 296 EGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYK 355

Query: 300 TGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 332
           TG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct: 356 TGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
255537936399 branched-chain amino acid aminotransfera 1.0 0.832 0.771 1e-154
225458938387 PREDICTED: branched-chain-amino-acid ami 1.0 0.857 0.756 1e-151
15218409388 branched-chain-amino-acid aminotransfera 1.0 0.855 0.756 1e-151
302142143387 unnamed protein product [Vitis vinifera] 1.0 0.857 0.759 1e-150
288310302389 branched chain amino acid transaminase [ 1.0 0.853 0.765 1e-150
449450320390 PREDICTED: branched-chain-amino-acid ami 1.0 0.851 0.762 1e-149
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 1.0 0.855 0.744 1e-149
359492522379 PREDICTED: branched-chain-amino-acid ami 0.996 0.873 0.759 1e-148
407317193393 mitochodrial branched-chain aminotransfe 1.0 0.844 0.735 1e-148
224063417318 predicted protein [Populus trichocarpa] 0.954 0.996 0.767 1e-143
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 257/333 (77%), Positives = 301/333 (90%), Gaps = 1/333 (0%)

Query: 1   MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAY 59
           +DWDNLGFG+TP DYMY MKC+ D  F +G+LSRYG +ELSPS+GVLNYGQGL+EG KAY
Sbjct: 67  LDWDNLGFGVTPTDYMYLMKCAKDGSFVQGQLSRYGNLELSPSAGVLNYGQGLYEGTKAY 126

Query: 60  RKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLY 119
           RKEDG+L+LFRPDQNAIR+Q GA+RMCMP PSIDQF+DAVKQ A +NKRWVPPPGKG+LY
Sbjct: 127 RKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRWVPPPGKGTLY 186

Query: 120 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 179
           IRPLL+GSGP+LGLAPAPEYTFLV+ASPVGNYFKEG APLNLY+E+EFHRA+ GGAGGVK
Sbjct: 187 IRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEFHRASRGGAGGVK 246

Query: 180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTIL 239
           +I+NYAPVLKAI+RAK RGFSDVLYLD+VNKK LEEVSSCNIF++KGN+IS+P  +GTIL
Sbjct: 247 SITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGNVISSPPANGTIL 306

Query: 240 AGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFK 299
            G+TR+SIIEIA D  +QVEERAIPVDEL++ADEVFCTGTAV VAPVGSITY+ +RIE+K
Sbjct: 307 QGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAPVGSITYQDRRIEYK 366

Query: 300 TGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 332
             A+SVS+EL STL GI+ GLI+D KGW +E+ 
Sbjct: 367 IRAESVSQELQSTLEGIKRGLIEDKKGWILEMQ 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information
>gi|224063417|ref|XP_002301136.1| predicted protein [Populus trichocarpa] gi|222842862|gb|EEE80409.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 1.0 0.855 0.756 1.2e-138
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 1.0 0.803 0.683 4.2e-127
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.996 0.861 0.671 1.1e-117
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.990 0.924 0.607 3.2e-113
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.990 0.896 0.610 2.9e-112
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.990 0.929 0.546 4.1e-104
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.978 0.910 0.414 7.4e-66
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.987 0.891 0.395 4.2e-63
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.978 0.883 0.399 3.1e-60
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.972 0.819 0.361 6.7e-49
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1357 (482.7 bits), Expect = 1.2e-138, P = 1.2e-138
 Identities = 252/333 (75%), Positives = 298/333 (89%)

Query:     1 MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAY 59
             +DWDNLGFGL PADYMY MKCS D  F +G LS YG I+LSPS+GVLNYGQ ++EG KAY
Sbjct:    56 LDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAY 115

Query:    60 RKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLY 119
             RKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRWVPP GKG+LY
Sbjct:   116 RKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLY 175

Query:   120 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 179
             IRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ RA PGGAGGVK
Sbjct:   176 IRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVK 235

Query:   180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTIL 239
             +I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  ISTPAT+GTIL
Sbjct:   236 SITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTIL 295

Query:   240 AGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFK 299
              GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+ITY+ KR+E+K
Sbjct:   296 EGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYK 355

Query:   300 TGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 332
             TG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct:   356 TGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24288BCAT1_MOUSE2, ., 6, ., 1, ., 4, 20.35150.98190.8445yesno
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.39400.99090.9676yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.75671.00.8556yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.39400.99090.9676yesno
O86505ILVE_STRCO2, ., 6, ., 1, ., 4, 20.38250.97280.8922yesno
Q5HRJ8ILVE_STAEQ2, ., 6, ., 1, ., 4, 20.40700.99090.9189yesno
P0AB81ILVE_ECOL62, ., 6, ., 1, ., 4, 20.30340.90960.9773yesno
Q6GJB4ILVE_STAAR2, ., 6, ., 1, ., 4, 20.40650.98490.9134yesno
Q54N47BCAT_DICDI2, ., 6, ., 1, ., 4, 20.34270.96980.8518yesno
Q5HIC1ILVE_STAAC2, ., 6, ., 1, ., 4, 20.39820.97590.9050yesno
P0A1A5ILVE_SALTY2, ., 6, ., 1, ., 4, 20.30760.90360.9708yesno
Q6GBT3ILVE_STAAS2, ., 6, ., 1, ., 4, 20.39820.97590.9050yesno
Q8CQ78ILVE_STAES2, ., 6, ., 1, ., 4, 20.40410.99090.9189yesno
O32954ILVE_MYCLE2, ., 6, ., 1, ., 4, 20.39940.97890.8831yesno
P39576ILVE2_BACSU2, ., 6, ., 1, ., 4, 20.40530.99390.9090yesno
P47176BCA2_YEAST2, ., 6, ., 1, ., 4, 20.34110.92770.8191yesno
P99138ILVE_STAAN2, ., 6, ., 1, ., 4, 20.39820.97590.9050yesno
Q10399ILVE_MYCTU2, ., 6, ., 1, ., 4, 20.39820.98190.8858yesno
P63513ILVE_STAAW2, ., 6, ., 1, ., 4, 20.39820.97590.9050yesno
P63512ILVE_STAAM2, ., 6, ., 1, ., 4, 20.39820.97590.9050yesno
P54687BCAT1_HUMAN2, ., 6, ., 1, ., 4, 20.34200.97590.8393yesno
P54689ILVE_HAEIN2, ., 6, ., 1, ., 4, 20.40170.99090.9591yesno
A0R066ILVE_MYCS22, ., 6, ., 1, ., 4, 20.39580.98790.8913yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.976
4th Layer2.6.1.420.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic; Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. ; Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity) (388 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G21400
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / br [...] (472 aa)
   • •• 0.985
BCDH_BETA1
BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutano [...] (352 aa)
   • •• 0.980
AT3G23940
dehydratase family; dehydratase family; FUNCTIONS IN- catalytic activity, dihydroxy-acid dehydr [...] (608 aa)
•  •••• 0.979
DIN4
DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [...] (358 aa)
   • •• 0.967
MAM1
MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synt [...] (506 aa)
•    •• 0.960
IMS2
IMS2 (2-ISOPROPYLMALATE SYNTHASE 2); 2-isopropylmalate synthase/ methylthioalkylmalate synthase [...] (503 aa)
•    •• 0.943
MAML-4
MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4); 2-isopropylmalate synthase; Encodes an active A [...] (631 aa)
•    •• 0.936
IMS1
IMS1 (2-ISOPROPYLMALATE SYNTHASE 1); 2-isopropylmalate synthase; Encodes an active Arabidopsis [...] (631 aa)
•    •• 0.934
EMB2247
EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / vali [...] (970 aa)
     •• 0.917
EMB2369
EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucl [...] (973 aa)
     •• 0.917

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 0.0
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 0.0
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-178
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-163
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-157
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-128
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-117
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 4e-86
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 9e-77
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 5e-41
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 1e-40
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 3e-37
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 6e-32
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 8e-29
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 2e-26
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 5e-25
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 6e-24
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 5e-18
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 1e-16
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 3e-15
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 2e-14
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 3e-14
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 1e-13
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 9e-13
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 2e-07
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 0.003
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  581 bits (1499), Expect = 0.0
 Identities = 243/334 (72%), Positives = 289/334 (86%), Gaps = 2/334 (0%)

Query: 1   MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAY 59
           +DWDNLGFGL P DYMY MKC+ D  F KG L R+G IELSPS+GVLNYGQGLFEG+KAY
Sbjct: 70  IDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAY 129

Query: 60  RKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLY 119
           RKEDG ++LFRP++NAIR++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGKGSLY
Sbjct: 130 RKEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLY 189

Query: 120 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 179
           IRPLL+GSG +LGLAPAPEYTFL++ SPVGNYFKEG+AP+NL VE+EFHRATPGG GGVK
Sbjct: 190 IRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVK 249

Query: 180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTIL 239
            I NYA VLKA S AK +G+SDVLYLD V+KK LEEVSSCNIFI+K N+ISTPA  GTIL
Sbjct: 250 TIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTIL 309

Query: 240 AGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEF- 298
            GITRKSII++A   GFQVEER + VDELLEADEVFCTGTAVVV+PVGSITY+GKR+ + 
Sbjct: 310 PGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYG 369

Query: 299 KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 332
           + G  +VS++LY+ L  +Q GLI+DN  WTVE++
Sbjct: 370 EGGFGTVSQQLYTVLTSLQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 332
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK13356286 aminotransferase; Provisional 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 100.0
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=1.6e-73  Score=549.96  Aligned_cols=332  Identities=73%  Similarity=1.261  Sum_probs=309.2

Q ss_pred             CCCCCCCCccccCCceEEEEeccc-eeeCCeEeeCCCcccCcCCccccccceeeeeEEEEeccCCeEeecChhhHHHHHH
Q 020003            1 MDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQ   79 (332)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~ng~~v~~~~~~v~~~d~~~~~G~g~FEt~r~~~~~~G~~~~f~l~~Hl~RL~   79 (332)
                      +||++||||.+|||||.+++|+.+ .|.||+++|.+++.+++.|++|+||||+||||++|++.+|++++|++++|++||.
T Consensus        70 ~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~H~~RL~  149 (403)
T PLN02782         70 IDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAIRMR  149 (403)
T ss_pred             CCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHHHHHHHH
Confidence            599999999999999999999775 8999999999999999999999999999999999988889999999999999999


Q ss_pred             HHHhhCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEeecCCCcccCCCCCeEEEEEEeecCccccCCCcce
Q 020003           80 TGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPL  159 (332)
Q Consensus        80 ~Sa~~l~i~~p~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~g~~~~  159 (332)
                      +||++|+|+.|+.+++.+++.++++.+..|+|+...+.+|||++++|+++.+|+.++.++.+++++.|.++++..|.+++
T Consensus       150 ~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~~~g~~~v  229 (403)
T PLN02782        150 NGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPI  229 (403)
T ss_pred             HHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECccccccCCccE
Confidence            99999999988899999999999999999999876678999998888776788887777888899999887777777788


Q ss_pred             EEEeeccccccCCCCCCCcccccChHHHHHHHHHHHHCCCCeEEEEccCCCCeEEEeCceeEEEEECCEEEcCCCCCCcc
Q 020003          160 NLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTIL  239 (332)
Q Consensus       160 ~l~~~~~~~r~~p~~l~~~Kt~~~y~~~~~a~~~a~~~g~de~llln~~~~G~v~E~s~sNifiv~~~~l~TP~~~~giL  239 (332)
                      ++.+..++.|..|..++++|+.+||+.+++++++|+++|+||+|++|.+++|+|+|++++|||++++++|+||+++.+||
T Consensus       230 ~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~~~iL  309 (403)
T PLN02782        230 NLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTIL  309 (403)
T ss_pred             EEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcCCCcCCcC
Confidence            88876668899888899999988999999999999999999999999522699999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHCCCcEEEEecCHhhHhccceeeeecccceeEEeEEEEeCCeEEeeCCC-ccHHHHHHHHHHHhhhc
Q 020003          240 AGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQT  318 (332)
Q Consensus       240 ~GitR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~I~~~~~~i~~~~g-~g~~~~~L~~~~~~~~~  318 (332)
                      |||||+.||++|+++|++|+|+.++++||.+|||+|+|||+.+|+||.+|.++|+.+.+++| .||++++|++.|.++++
T Consensus       310 pGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~~l~~iq~  389 (403)
T PLN02782        310 PGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYTVLTSLQM  389 (403)
T ss_pred             cCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999888998877666 79999999999999999


Q ss_pred             cCCCCCCCCeeeCC
Q 020003          319 GLIKDNKGWTVEIN  332 (332)
Q Consensus       319 ~~~~~~~~~~~~~~  332 (332)
                      |+.+|..+|+++|+
T Consensus       390 G~~~~~~~W~~~v~  403 (403)
T PLN02782        390 GLIEDNMNWTVELS  403 (403)
T ss_pred             CCCCCCCCCeEECC
Confidence            99999999999986

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 4e-69
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 2e-66
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 2e-66
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 4e-65
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 3e-63
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 8e-47
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 3e-46
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 7e-45
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 7e-45
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 2e-44
1ekf_A365 Crystallographic Structure Of Human Branched Chain 2e-44
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-43
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 3e-42
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 3e-26
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 5e-26
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 9e-20
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 1e-18
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 3e-09
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 3e-08
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 3e-08
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 3e-08
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 5e-08
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 1e-07
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 2e-07
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 1e-06
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 3e-06
2y4r_A292 Crystal Structure Of 4-Amino-4-Deoxychorismate Lyas 8e-06
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 8e-05
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 197/337 (58%), Gaps = 6/337 (1%)
Query: 1   MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 60
           +DW NLGF      + Y     +  ++ G+L+    + +S SS  L+YGQ  FEG+KAYR
Sbjct: 9   LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYR 68
Query: 61  KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 119
            +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G G +LY
Sbjct: 69  TKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLY 128
Query: 120 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 179
           +RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N  ++D++ RA P G G  K
Sbjct: 129 LRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAK 188
Query: 180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF-ILKGNIISTPATSGTI 238
              NYA  L     A  R FSDV+YLD      +EEV S N F I K N   TP  S +I
Sbjct: 189 VGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITP-LSPSI 247
Query: 239 LAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIE 297
           L  +T+ S++ +A    G +  E  + VDEL +  E    GTA V++P+G + +      
Sbjct: 248 LPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHV 307
Query: 298 F--KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 332
           F  +T    V+ +LY  L GIQ G +K  +GW  +++
Sbjct: 308 FYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|2Y4R|A Chain A, Crystal Structure Of 4-Amino-4-Deoxychorismate Lyase From Pseudomonas Aeruginosa Length = 292 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-172
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-164
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-162
1iye_A309 Branched-chain amino acid aminotransferase; hexame 2e-50
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 1e-49
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 3e-49
3u0g_A328 Putative branched-chain amino acid aminotransfera; 8e-49
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 5e-47
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 4e-46
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 2e-44
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 8e-42
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 2e-38
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 8e-38
3qqm_A221 MLR3007 protein; structural genomics, joint center 2e-29
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 3e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
Probab=100.00  E-value=6.2e-74  Score=544.44  Aligned_cols=331  Identities=42%  Similarity=0.719  Sum_probs=301.7

Q ss_pred             CCCCCCCCccccCCceEEEEeccceeeCCeEeeCCCcccCcCCccccccceeeeeEEEEeccCCeEeecChhhHHHHHHH
Q 020003            1 MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQT   80 (332)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~v~~~~~~v~~~d~~~~~G~g~FEt~r~~~~~~G~~~~f~l~~Hl~RL~~   80 (332)
                      +||++||||..|||||..++|..+.|+||+++|.+++.|++.|++|+||||+|||||++++++|++++|+|++|++||.+
T Consensus         9 ~~~~~l~fg~~~td~m~~~~~~~~~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~   88 (345)
T 4dqn_A            9 LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQR   88 (345)
T ss_dssp             CCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHH
T ss_pred             CCchhcCCCCcccCceEEEEecCCcEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHH
Confidence            59999999999999999999998889999999999999999999999999999999999998898889999999999999


Q ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHcCCCCCCC-CCceEEEEEEEeecCCCcccCCCCCeEEEEEEeecCccccCCCcce
Q 020003           81 GAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPL  159 (332)
Q Consensus        81 Sa~~l~i~~p~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~g~~~~  159 (332)
                      ||++|+|+.++.++|.+.+.+++++|..|+|+. ..+.+|||+++++.++.+|+.|+..+.++|++.|.++++..+.+++
T Consensus        89 Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~gv  168 (345)
T 4dqn_A           89 TADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPT  168 (345)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCCCE
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCCCE
Confidence            999999995599999999999999999888864 2357999999887776788887767888888999887776566789


Q ss_pred             EEEeeccccccCCCCCCCcccccChHHHHHHHHHHHHCCCCeEEEEccCCCCeEEEeCceeEEEE-ECCEEEcCCCCCCc
Q 020003          160 NLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSGTI  238 (332)
Q Consensus       160 ~l~~~~~~~r~~p~~l~~~Kt~~~y~~~~~a~~~a~~~g~de~llln~~~~G~v~E~s~sNifiv-~~~~l~TP~~~~gi  238 (332)
                      ++.+++++.|..|+.++++|+..||+.+++|+++|+++|+||+|++|.+++|+|+|++++|||++ +|++|+||| +.++
T Consensus       169 ~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~~~i  247 (345)
T 4dqn_A          169 NFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-SPSI  247 (345)
T ss_dssp             EEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-CTTS
T ss_pred             EEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-CCCc
Confidence            98887657899998899999944999999999999999999999999732499999999999998 899999999 8999


Q ss_pred             ccchHHHHHHHHHHH-CCCcEEEEecCHhhHhccceeeeecccceeEEeEEEEeCCeEEeeCCC--ccHHHHHHHHHHHh
Q 020003          239 LAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTLVG  315 (332)
Q Consensus       239 L~GitR~~vl~~~~~-~g~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~I~~~~~~i~~~~g--~g~~~~~L~~~~~~  315 (332)
                      |+||||+.||++|++ +|++|+|+.++++||..|||+|+|||+++|+||.+|+..++.+.++++  +||++++|+++|.+
T Consensus       248 L~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~~  327 (345)
T 4dqn_A          248 LPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDELTG  327 (345)
T ss_dssp             CCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHHHH
Confidence            999999999999999 999999999999999999999999999999999999755555555553  79999999999999


Q ss_pred             hhccCCCCCCCCeeeCC
Q 020003          316 IQTGLIKDNKGWTVEIN  332 (332)
Q Consensus       316 ~~~~~~~~~~~~~~~~~  332 (332)
                      +++|+.+++.+|+++|+
T Consensus       328 i~~g~~~~~~~W~~~v~  344 (345)
T 4dqn_A          328 IQFGDVKAPEGWIYKVD  344 (345)
T ss_dssp             HHTTSSCCCTTCEEETT
T ss_pred             HHcCCCCCCCCCceECC
Confidence            99999999999999986
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 332
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 6e-82
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 2e-56
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 2e-30
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 1e-26
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  250 bits (640), Expect = 6e-82
 Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 1   MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 60
              + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80

Query: 61  KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 120
            +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+
Sbjct: 81  GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYV 140

Query: 121 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFHRATPGGAGGVK 179
           RP+L+G+ P LG++        V   PVG YF    + P++L  +  F RA  GG G  K
Sbjct: 141 RPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYK 200

Query: 180 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN----IISTPATS 235
              NY P +     A  RG   VL+L   + +  E  +               + TP  +
Sbjct: 201 LGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLN 260

Query: 236 GTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGS 288
           G IL G+ R+S++++A   G F+V ER I + +LL A       EVF +GTA  V PV  
Sbjct: 261 GVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320

Query: 289 ITYRGKRIEFKTGAQ--SVSRELYSTLVGIQTGLIKDNKGWTVEI 331
           I Y+ + +   T      +       L  IQ G       W   +
Sbjct: 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYG--IRAHEWMFPV 363
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=9.1e-68  Score=504.76  Aligned_cols=327  Identities=34%  Similarity=0.598  Sum_probs=290.9

Q ss_pred             CCCCCCCccccCCceEEEEeccceeeCCeEeeCCCcccCcCCccccccceeeeeEEEEeccCCeEeecChhhHHHHHHHH
Q 020003            2 DWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTG   81 (332)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~v~~~~~~v~~~d~~~~~G~g~FEt~r~~~~~~G~~~~f~l~~Hl~RL~~S   81 (332)
                      +-|+|+||.+|||||..++|+.+.|.||+++|.+++.|++.|++|+||||+|||||+|++++|++++|+|++|++||.+|
T Consensus        22 ~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~~S  101 (363)
T d2a1ha1          22 PGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRS  101 (363)
T ss_dssp             TTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHH
T ss_pred             CcccCCCCCcccceEEEEEecCCeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999999999999999989999999999999999999


Q ss_pred             HhhCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEeecCCCcccCCCCCeEEEEEEeecCccccCC-CcceE
Q 020003           82 AERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAPLN  160 (332)
Q Consensus        82 a~~l~i~~p~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~g-~~~~~  160 (332)
                      |+++.++.++.+++.+.+.++++.|..++|......+|+|+++++.+...++.++......+.+.|...++..+ .++..
T Consensus       102 a~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~  181 (363)
T d2a1ha1         102 AMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVS  181 (363)
T ss_dssp             HHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCEE
T ss_pred             HHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCcccccccee
Confidence            99999987789999999999999998888877677899999888776667777765555556666665544332 45566


Q ss_pred             EEeeccccccCCCCCCCcccccChHHHHHHHHHHHHCCCCeEEEEccCCCCeEEEeCceeEEEEECC-----EEEcCCCC
Q 020003          161 LYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN-----IISTPATS  235 (332)
Q Consensus       161 l~~~~~~~r~~p~~l~~~Kt~~~y~~~~~a~~~a~~~g~de~llln~~~~G~v~E~s~sNifiv~~~-----~l~TP~~~  235 (332)
                      +.+.+.+.|..|......|..+||+++++|.++|+++|+||+|++|.+ +|+|+|++++|+|+++++     +++|||++
T Consensus       182 ~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tppl~  260 (363)
T d2a1ha1         182 LLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTPPLN  260 (363)
T ss_dssp             EEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEECCCS
T ss_pred             EEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEecccc
Confidence            666666778787777788877899999999999999999999999753 799999999999999765     69999999


Q ss_pred             CCcccchHHHHHHHHHHHCC-CcEEEEecCHhhHhcc------ceeeeecccceeEEeEEEEeCCeEEeeCCC-cc-HHH
Q 020003          236 GTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQ-SVS  306 (332)
Q Consensus       236 ~giL~GitR~~vl~~~~~~g-~~v~e~~i~~~dL~~a------devfl~ns~~gi~pV~~I~~~~~~i~~~~g-~g-~~~  306 (332)
                      .+|||||||+.||++|+++| ++|+|+.++++||.+|      ||||+|||+.+|.||.+|.++++.+.+++| +| ++|
T Consensus       261 ~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~~it  340 (363)
T d2a1ha1         261 GVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELI  340 (363)
T ss_dssp             SSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHH
T ss_pred             ccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCHHHH
Confidence            99999999999999999997 9999999999999999      999999999999999999888887767777 66 599


Q ss_pred             HHHHHHHHhhhccCCCCCCCCeeeC
Q 020003          307 RELYSTLVGIQTGLIKDNKGWTVEI  331 (332)
Q Consensus       307 ~~L~~~~~~~~~~~~~~~~~~~~~~  331 (332)
                      ++|+++|.++++|+.++  +|+++|
T Consensus       341 ~~L~~~l~~iq~G~~~~--~W~~~v  363 (363)
T d2a1ha1         341 LRFQKELKEIQYGIRAH--EWMFPV  363 (363)
T ss_dssp             HHHHHHHHHHHTTSSCC--TTEEEC
T ss_pred             HHHHHHHHHHhCCCCCC--CCeeEC
Confidence            99999999999998875  899987
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure