Citrus Sinensis ID: 020024

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
Protein Sequence
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW
Secondary Structure (PSIPRED)
cccEEEEEEccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccccccEEEEccEEEEccccccEEEEEEccHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHccEEEEEcccHHHHHHHHHHccEEccccHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccccccccEEEcccccccccccEEEEEEccccccHHcHHHHHHHHHHHHcccccccccccHcccccccccHHHHHHHHHHHHHHHHHHHHHccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccEEEcccHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHccccccEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHcccEEEEcccHHHHHHHHHccccEEcccHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHcc
Coil and Loop (DISEMBL)
MKLEVEFFcaqplaqptvvplikghnpagdrliifsdfdltctivdssAILAEIAIvtapksdqnqpenqlgrmssgelrntwgLLSKQYTEEYEQCIESfmpsekvenfnYETLHKALEQLSHFEKRANSRViesgvlkginlEDIKKAGerlslqdgCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAnefsfkesistgeiiekvespiDKVQAFNNTLEkygtdrknlsvYIGDSVGDLLCLLEADIGivigsssslrrvgsqfgvtfiplypglvkkqkeytegsssnwkeksGILYTVSSWAEVHAFILGW
Flexible Loop (DISEMBL)
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVtapksdqnqpenqlgrmssgelrNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANsrviesgvlkginLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLekygtdrknlSVYIGDSVGDLLCLLEADIGIVIGsssslrrvGSQFGVTFIPLYPGLVKKQKEYtegsssnwkeksGILYTVSSWAEVHAFILGW
Low Complexity Region (SEG)
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW
Disordered region (IsUnstruct)
****VEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVT**********************NTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQK*********WKEKSGILYTVSSWAEVHAFILG*
Disordered Region (DISOPRED)
*KLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQN***********GELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQ***********KEKSGILYTVSSWAEVHAFILGW
Disordered Region (DISEMBL)
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQ**********WKEKSGILYTVSSWAEVHAFILGW
Disordered Region (DISPRO)
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPK**************SGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFILGW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	332	2.2.26 [Sep-21-2011]
Q9UUE0	274	UPF0655 protein C17G9.12c	yes	no	0.789	0.956	0.233	1e-09
P25616	317	UPF0655 protein YCR015C O	yes	no	0.641	0.671	0.264	3e-06

>sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 50/312 (16%)

Query: 32  LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 91
           ++   DFD T T  D+  +LAE           N+PE              W ++S +Y 
Sbjct: 1   MLYIVDFDETITTYDTIHLLAEAV---------NKPEE-------------WSVISDKYW 38

Query: 92  EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 151
           +EY    E+   S  + ++        L    + E+ +  R+ +S    G++   +    
Sbjct: 39  QEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93

Query: 152 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF---SSAGLNALNVHANE 207
           + ++L+ G   F   +V +  ++  + HVLS  W   +I  +    +    + L VHAN+
Sbjct: 94  QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153

Query: 208 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 260
           F F  S +T  G I+ +  S +     DKV+ F   ++          VYIGDS  D  C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213

Query: 261 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 319
           L  + I I++ S+     + S+F  V  + +    V+K                 I+YT 
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA-----------VPGKKIIYTC 262

Query: 320 SSWAEVHAFILG 331
           S W  +    L 
Sbjct: 263 SDWCAIQKAFLA 274

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P25616|YCQ5_YEAST UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR015C PE=3 SV=2

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 48/261 (18%)

Query: 31  RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 90
           + II SDFD T T VD+   +A++  +  P+                 L+  WG  +K Y
Sbjct: 2   KTIIISDFDETITRVDTICTIAKLPYLLNPR-----------------LKPEWGHFTKTY 44

Query: 91  TEEYEQ----------CIESFMPSEKVE-NFNYETLHKALEQLSH---FEKRANSRVIES 136
            + Y +           + S +P+   + NFN +     L+  +H    E  + + + + 
Sbjct: 45  MDGYHKYKYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQ 103

Query: 137 GVLKGINLEDIK-----KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 191
            + K I+L+ +K     +  E   L+DG  TF   VVK  N  ++ +VLS  W  + I  
Sbjct: 104 QIFKSISLDQMKTFARDQNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHE 161

Query: 192 SFSSAGLNALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRK 245
                 L   ++  N+    S K S S  GE   ++ +  DKV+     L+K   G +++
Sbjct: 162 VIGDRRLKNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKE 221

Query: 246 NLSV---YIGDSVGDLLCLLE 263
             S    YIGDS  DLL +L 
Sbjct: 222 GNSCSYWYIGDSETDLLSILH 242

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
255561995	574	conserved hypothetical protein [Ricinus	0.996	0.576	0.807	1e-159
225466287	566	PREDICTED: uncharacterized protein LOC10	1.0	0.586	0.789	1e-155
296088278	657	unnamed protein product [Vitis vinifera]	1.0	0.505	0.789	1e-155
118486577	618	unknown [Populus trichocarpa]	0.993	0.533	0.780	1e-154
356576723	607	PREDICTED: uncharacterized protein LOC10	0.996	0.545	0.782	1e-154
356535194	604	PREDICTED: uncharacterized protein LOC10	0.996	0.548	0.779	1e-153
224125750	577	predicted protein [Populus trichocarpa]	0.993	0.571	0.783	1e-152
224145849	541	predicted protein [Populus trichocarpa]	0.915	0.561	0.731	1e-139
357441425	452	hypothetical protein MTR_1g080470 [Medic	0.948	0.696	0.725	1e-138
449449591	567	PREDICTED: uncharacterized protein LOC10	0.996	0.583	0.663	1e-133

>gi|255561995|ref|XP_002522006.1| conserved hypothetical protein [Ricinus communis] gi|223538810|gb|EEF40410.1| conserved hypothetical protein [Ricinus communis]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/332 (80%), Positives = 302/332 (90%), Gaps = 1/332 (0%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFF  QPLAQP VVPL K HNPA DRL+IFSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct: 244 MKLEIEFFNVQPLAQPVVVPLTKEHNPAEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAP 303

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSDQ QPENQ+ RM S ELRNTW ++S QYTEEYEQCIE  +PSEKVE FNYE L KALE
Sbjct: 304 KSDQVQPENQIARMPSAELRNTWDIISGQYTEEYEQCIERLLPSEKVE-FNYEALCKALE 362

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE+RANSRVI SGVLKG+NLEDIK+AGERL LQDGCT+FFQK+VKNE+LNANVHVL
Sbjct: 363 QLSDFERRANSRVIGSGVLKGLNLEDIKRAGERLILQDGCTSFFQKLVKNESLNANVHVL 422

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWC DLIR++FSS GL+ L++HANEF+++ESISTGEI +KVESPIDK QAFN+ L+ Y
Sbjct: 423 SYCWCADLIRSAFSSGGLDTLSIHANEFTYEESISTGEIDKKVESPIDKAQAFNSILKNY 482

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
            T++KNL+VYIGDSVGDLLCLL+ADIGIVIGSSSSLRRVGSQFGV+F+PL+PGLVKKQKE
Sbjct: 483 STEKKNLTVYIGDSVGDLLCLLQADIGIVIGSSSSLRRVGSQFGVSFLPLFPGLVKKQKE 542

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
           +TEGSS NWK +SGILYTVSSWAE+HAFILGW
Sbjct: 543 HTEGSSFNWKGQSGILYTVSSWAEIHAFILGW 574

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466287|ref|XP_002270291.1| PREDICTED: uncharacterized protein LOC100266835 [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/332 (78%), Positives = 297/332 (89%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAP
Sbjct: 235 MKLEIEFFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAP 294

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           K DQNQPENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALE
Sbjct: 295 KFDQNQPENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALE 354

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FEKRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+L
Sbjct: 355 QLSDFEKRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHIL 414

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE  
Sbjct: 415 SYCWCGDLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENC 474

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             DRKNL+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+  LVKKQKE
Sbjct: 475 SNDRKNLTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKE 534

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
           Y EGSSS WK  SG LYTVSSWAE+HAFILGW
Sbjct: 535 YVEGSSSRWKGLSGTLYTVSSWAEIHAFILGW 566

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088278|emb|CBI36504.3| unnamed protein product [Vitis vinifera]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/332 (78%), Positives = 297/332 (89%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFFCAQ L Q T+VPL KGH+PA DRL+IFSDFDLTCT+VDSSAILAEIAI+TAP
Sbjct: 326 MKLEIEFFCAQLLDQYTIVPLTKGHDPAADRLVIFSDFDLTCTVVDSSAILAEIAIITAP 385

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           K DQNQPENQ+ RMSS +LRNTWG+LSKQYTEEYEQCIE+ +PSEKVE F+YE L KALE
Sbjct: 386 KFDQNQPENQIIRMSSADLRNTWGVLSKQYTEEYEQCIENILPSEKVEEFDYEGLCKALE 445

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FEKRANSRVIESGVLKG+NL+DIK+AGERL LQDGC +FFQ +VKNE+L A+VH+L
Sbjct: 446 QLSDFEKRANSRVIESGVLKGLNLDDIKRAGERLILQDGCASFFQNIVKNESLIADVHIL 505

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSS GL+ LNVHANEF+FKESIS GEI++ VESPIDK++AF N LE  
Sbjct: 506 SYCWCGDLIRSAFSSGGLHVLNVHANEFAFKESISNGEIVKNVESPIDKLKAFLNILENC 565

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             DRKNL+VYIGDSVGDLLCLL AD+GIVIGSSSSL+RVGSQFGV+F+PL+  LVKKQKE
Sbjct: 566 SNDRKNLTVYIGDSVGDLLCLLNADVGIVIGSSSSLKRVGSQFGVSFVPLFRFLVKKQKE 625

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
           Y EGSSS WK  SG LYTVSSWAE+HAFILGW
Sbjct: 626 YVEGSSSRWKGLSGTLYTVSSWAEIHAFILGW 657

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486577|gb|ABK95127.1| unknown [Populus trichocarpa]

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/332 (78%), Positives = 297/332 (89%), Gaps = 2/332 (0%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFF AQP+AQ T+ PL KGHNP  DRL+IFSDFDLTCT+VDSSAILAEIAI+TAP
Sbjct: 289 MKLEIEFFLAQPIAQTTLAPLTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAP 348

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSD  QPE Q+ RMSS +LRNTWGLLS QYTEEYEQCIES MPS KVE FNYE L KALE
Sbjct: 349 KSDVVQPETQIARMSSADLRNTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALCKALE 407

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE+RANSRVI+SGVLKG+NLED+K+AGERL LQDGC  FFQK+VKNENLN NVHVL
Sbjct: 408 QLSDFERRANSRVIDSGVLKGLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVL 467

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSS GL+ALN+HANE  F+ESISTGEI++KVESP+DK QAFN+ L+ Y
Sbjct: 468 SYCWCGDLIRSAFSSGGLDALNIHANELIFEESISTGEIVKKVESPMDKAQAFNDILKNY 527

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
            +DRKNL+VYIGDSVGDLLCLL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+KQKE
Sbjct: 528 SSDRKNLTVYIGDSVGDLLCLLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE 587

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
            ++G S NWK  SGILYTVSSW+E+HAFILGW
Sbjct: 588 -SDGESPNWKGLSGILYTVSSWSEIHAFILGW 618

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576723|ref|XP_003556479.1| PREDICTED: uncharacterized protein LOC100813450 [Glycine max]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/331 (78%), Positives = 295/331 (89%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE++FF AQPL QPT+VPL KGH PA D LI+FSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct: 276 MKLEIDFFSAQPLFQPTIVPLTKGHKPAEDHLIVFSDFDLTCTVVDSSAILAEIAIVTAP 335

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSDQNQPE+Q+ RM S +LRNTWG LSKQYTEEYEQCIES MPS+++ NF+Y+ L  ALE
Sbjct: 336 KSDQNQPEDQIVRMLSSDLRNTWGFLSKQYTEEYEQCIESIMPSDRLNNFDYKELSMALE 395

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE  AN+RVIESGVLKGI+LEDIK+AGERL LQDGCT FFQ +VKNENLN+NVHVL
Sbjct: 396 QLSKFENTANNRVIESGVLKGISLEDIKRAGERLILQDGCTNFFQSIVKNENLNSNVHVL 455

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSSA LN LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+  
Sbjct: 456 SYCWCGDLIRSAFSSADLNELNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNC 515

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             D+K L+VYIGDSVGDLLCLLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKE
Sbjct: 516 NDDKKKLTVYIGDSVGDLLCLLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKE 575

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILG 331
           Y EGS+SNWK  SGILYTVSSWAEVHAFILG
Sbjct: 576 YVEGSTSNWKGLSGILYTVSSWAEVHAFILG 606

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535194|ref|XP_003536133.1| PREDICTED: uncharacterized protein LOC100788250 [Glycine max]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 258/331 (77%), Positives = 292/331 (88%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFF AQPL QPT+VPL KGH P  D LIIFSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct: 273 MKLEIEFFSAQPLFQPTIVPLTKGHKPVEDHLIIFSDFDLTCTVVDSSAILAEIAIVTAP 332

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSDQNQPE+Q+ RM S +LRNTWG LSKQYTEEYEQCIES MP +++ NF+Y+ L  ALE
Sbjct: 333 KSDQNQPEDQIVRMLSSDLRNTWGFLSKQYTEEYEQCIESIMPPDRLNNFDYKELSMALE 392

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE  AN+RVIESGVLKGI+LEDIK+AGERL LQDGC  FFQ +VKNENLNANVHVL
Sbjct: 393 QLSKFENTANNRVIESGVLKGISLEDIKRAGERLILQDGCPNFFQSIVKNENLNANVHVL 452

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSSA LN LNVHANEF+++ S+STGEI++KVESPIDKV+AF N L+  
Sbjct: 453 SYCWCGDLIRSTFSSADLNELNVHANEFTYEGSVSTGEIVKKVESPIDKVEAFRNILKNC 512

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             D+K L+VYIGDSVGDLLCLLEAD+GIVIGSSSSLR VG+QFG++F+PLY GLVKKQKE
Sbjct: 513 NDDKKKLTVYIGDSVGDLLCLLEADVGIVIGSSSSLRSVGTQFGISFVPLYSGLVKKQKE 572

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILG 331
           Y EGS+S+WK  SGILYTVSSWAEVHAFILG
Sbjct: 573 YVEGSTSDWKGLSGILYTVSSWAEVHAFILG 603

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125750|ref|XP_002319666.1| predicted protein [Populus trichocarpa] gi|222858042|gb|EEE95589.1| predicted protein [Populus trichocarpa]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/332 (78%), Positives = 292/332 (87%), Gaps = 2/332 (0%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE++FF AQPLAQPTV PL KGHNPA DRL+IFSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct: 248 MKLEIDFFLAQPLAQPTVAPLTKGHNPAEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAP 307

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSD  Q E Q+ RMSS +LRNTW LLS QYTEEYEQCIES MPS+KVE FNYE L KALE
Sbjct: 308 KSDVVQSEAQIARMSSADLRNTWDLLSGQYTEEYEQCIESIMPSKKVE-FNYEALCKALE 366

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QL  FE+R NSRVIES VLKG+NLED+K+AGERL LQDGCT+FFQK+V NENLN NVHVL
Sbjct: 367 QLLDFERRVNSRVIESEVLKGLNLEDVKRAGERLILQDGCTSFFQKIVNNENLNTNVHVL 426

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSS GL+ +NVHANE  F ESISTGEI++KVESP+DK QAFN+ L+ Y
Sbjct: 427 SYCWCGDLIRSAFSSGGLD-VNVHANELIFDESISTGEIVKKVESPLDKAQAFNDILKNY 485

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             DRKNL+VYIGDSVGDLLCLL+ADIGIV+GSS+SLR+VGSQFGV+F+PL+PGLV+KQKE
Sbjct: 486 SNDRKNLTVYIGDSVGDLLCLLKADIGIVVGSSASLRKVGSQFGVSFVPLFPGLVRKQKE 545

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
               SS NWK  SGILYTVSSWAE+HAFILGW
Sbjct: 546 SDGESSPNWKGLSGILYTVSSWAEIHAFILGW 577

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145849|ref|XP_002325785.1| predicted protein [Populus trichocarpa] gi|222862660|gb|EEF00167.1| predicted protein [Populus trichocarpa]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/332 (73%), Positives = 275/332 (82%), Gaps = 28/332 (8%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE+EFF AQP+AQ T+ PL KGHNP  DRL+IFSDFDLTCT+VDSSAILAEIAI+TAP
Sbjct: 238 MKLEIEFFLAQPIAQTTLAPLTKGHNPEEDRLVIFSDFDLTCTVVDSSAILAEIAILTAP 297

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSD  QPE Q+ RMSS +LRNTWGLLS QYTEEYEQCIES MPS KVE FNYE L KALE
Sbjct: 298 KSDVVQPETQIARMSSADLRNTWGLLSGQYTEEYEQCIESIMPSAKVE-FNYEALCKALE 356

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE+RANSRVI+SGVLKG+NLED+K+AGERL LQDGC  FFQK+VKNENLN NVHVL
Sbjct: 357 QLSDFERRANSRVIDSGVLKGLNLEDVKRAGERLILQDGCIGFFQKIVKNENLNTNVHVL 416

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSS GL+ALN+HANE  F+ESISTGEI                     
Sbjct: 417 SYCWCGDLIRSAFSSGGLDALNIHANELIFEESISTGEI--------------------- 455

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
                NL+VYIGDSVGDLLCLL+ADIGIV+GSS+SLR VGSQ+GV+F+PL+PGLV+KQKE
Sbjct: 456 -----NLTVYIGDSVGDLLCLLQADIGIVVGSSASLRSVGSQYGVSFVPLFPGLVRKQKE 510

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILGW 332
            ++G S NWK  SGILYTVSSW+E+HAFILGW
Sbjct: 511 -SDGESPNWKGLSGILYTVSSWSEIHAFILGW 541

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441425|ref|XP_003590990.1| hypothetical protein MTR_1g080470 [Medicago truncatula] gi|355480038|gb|AES61241.1| hypothetical protein MTR_1g080470 [Medicago truncatula]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 240/331 (72%), Positives = 275/331 (83%), Gaps = 16/331 (4%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE++FF AQPL QPT+ PL KGHN   DRL+IFSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct: 137 MKLEIDFFTAQPLFQPTIAPLTKGHNLEEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAP 196

Query: 61  KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
           KSD NQPE+Q  RM S +LRNTWG LSKQYTEEYEQCIES MP+ K+ENF+Y+ L  ALE
Sbjct: 197 KSD-NQPEDQTARMLSSDLRNTWGSLSKQYTEEYEQCIESIMPANKLENFDYKQLSTALE 255

Query: 121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
           QLS FE  AN+RV+ESGVLKGIN+ED+K+AGERL LQDGCT FF++VVKN+NLNANVHVL
Sbjct: 256 QLSKFENSANNRVVESGVLKGINIEDVKRAGERLILQDGCTDFFKRVVKNKNLNANVHVL 315

Query: 181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY 240
           SYCWCGDLIR++FSSA LN ++VHANEFS+  S+STG+I++KVESPIDKVQAF N LE  
Sbjct: 316 SYCWCGDLIRSAFSSADLNEMDVHANEFSYDGSVSTGDIVKKVESPIDKVQAFRNILENC 375

Query: 241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKE 300
             D+K L+VYIGDSVGDLLCLLEAD+GIVIGSSSSLR +G+QF               + 
Sbjct: 376 NDDKKKLTVYIGDSVGDLLCLLEADVGIVIGSSSSLRTIGTQF---------------ER 420

Query: 301 YTEGSSSNWKEKSGILYTVSSWAEVHAFILG 331
             E SSSNWK  SGILYTVSSWAEVHAF+LG
Sbjct: 421 INEESSSNWKGLSGILYTVSSWAEVHAFVLG 451

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449591|ref|XP_004142548.1| PREDICTED: uncharacterized protein LOC101217744 [Cucumis sativus] gi|449521164|ref|XP_004167600.1| PREDICTED: uncharacterized LOC101217744 [Cucumis sativus]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 221/333 (66%), Positives = 278/333 (83%), Gaps = 2/333 (0%)

Query: 1   MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
           MKLE EFFC+QP++Q TV+PLIK HNPA DRL++FSDFDLTCT+VDSSAILAEIAIV AP
Sbjct: 234 MKLEQEFFCSQPVSQKTVLPLIKDHNPAEDRLVLFSDFDLTCTVVDSSAILAEIAIVRAP 293

Query: 61  KSDQNQPENQ-LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKAL 119
           K +Q QPE+Q + RMSS +LRNTWG++S+QYTEEYE+CI+  +P +  + F +E L  AL
Sbjct: 294 KPEQIQPEDQPITRMSSADLRNTWGVISRQYTEEYEECIDKVLPPKTGKEFKFEDLCTAL 353

Query: 120 EQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHV 179
           E LS FEKRAN+RVIESGVLKG+N EDI++AGE L +QDGC  FF    K+ENLN  VH+
Sbjct: 354 ELLSDFEKRANNRVIESGVLKGLNFEDIRRAGEHLIIQDGCFNFFGTACKSENLNVGVHI 413

Query: 180 LSYCWCGDLIRASFSSAGL-NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLE 238
           LSYCWC DLIR+SF+S GL   + +HANEF+F+E++STG+++ +VESP+DKV AF   LE
Sbjct: 414 LSYCWCADLIRSSFNSGGLLTQVTIHANEFAFEEAVSTGDLVRRVESPLDKVHAFRKVLE 473

Query: 239 KYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQ 298
            YG DR NL+VYIGDS+GDLLCLLEADIGIVIGSS+SLRR+ ++FGV+F+PLYP +V+KQ
Sbjct: 474 NYGNDRNNLTVYIGDSIGDLLCLLEADIGIVIGSSASLRRLATRFGVSFVPLYPSVVRKQ 533

Query: 299 KEYTEGSSSNWKEKSGILYTVSSWAEVHAFILG 331
           K+ T+ S  +W+  SGILYTV+SWAE+HAF+LG
Sbjct: 534 KDLTKDSRRSWRGLSGILYTVNSWAEIHAFVLG 566

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
TAIR|locus:2145816	617	AT5G32470 "AT5G32470" [Arabido	0.993	0.534	0.705	1.7e-123
UNIPROTKB|G4MTS1	304	MGG_04762 "Uncharacterized pro	0.701	0.766	0.256	2.8e-10
POMBASE|SPBC17G9.12c	274	SPBC17G9.12c "hydrolase (predi	0.783	0.948	0.257	4.4e-08
SGD|S000000608	317	YCR015C "Putative protein of u	0.683	0.716	0.267	8e-06
CGD|CAL0004824	288	orf19.6732 [Candida albicans (	0.551	0.635	0.252	1.1e-05

TAIR|locus:2145816 AT5G32470 "AT5G32470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
 Identities = 237/336 (70%), Positives = 283/336 (84%)

Query:     1 MKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAP 60
             MKLEVEFF AQPLAQPT+VPL+K H+   D L+IFSDFDLTCT+VDSSAILAEIAIVTAP
Sbjct:   283 MKLEVEFFHAQPLAQPTIVPLLKNHSK--DDLVIFSDFDLTCTVVDSSAILAEIAIVTAP 340

Query:    61 KSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALE 120
             K +Q++   Q+ RM S +L+NTW LLSKQYTE YE+CIES +  +K + F+YE L KALE
Sbjct:   341 KDEQSRSGQQIHRMLSSDLKNTWNLLSKQYTEHYEECIESILNKKKADKFDYEGLCKALE 400

Query:   121 QLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVL 180
             QLS FEK AN+RVIESGVLKG+NLEDIK+AGERL LQDGC   FQK++K ENLNA +HVL
Sbjct:   401 QLSDFEKEANNRVIESGVLKGLNLEDIKRAGERLILQDGCINVFQKILKTENLNAELHVL 460

Query:   181 SYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLE-- 238
             SYCWCGDLIRA+FS+ G++A+ VHANEF+F+ESISTGEI  KVESPI+K Q F + L+  
Sbjct:   461 SYCWCGDLIRAAFSAGGVDAVEVHANEFTFEESISTGEIERKVESPINKAQQFKSILQNR 520

Query:   239 KYGTDRKN-LSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKK 297
             K   ++K+ LSVYIGDSVGDLLCLLEADIGIV+ SSSSLRRVGS FGV+F+PL+ G+V+K
Sbjct:   521 KNENNKKSFLSVYIGDSVGDLLCLLEADIGIVVSSSSSLRRVGSHFGVSFVPLFSGIVQK 580

Query:   298 QKEYTEGSSSN-WKEKSGILYTVSSWAEVHAFILGW 332
             QK++TE SSS+ WK  SG LYTVSSWAE+H+F LGW
Sbjct:   581 QKQHTEESSSSAWKGLSGTLYTVSSWAEIHSFALGW 616

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|G4MTS1 MGG_04762 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 68/265 (25%), Positives = 115/265 (43%)

Query:    37 DFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQ 96
             DFD T    DS   L E  +    K  Q+            +L  TW  +   Y  +++ 
Sbjct:     6 DFDGTIIAKDSINCLGEFGVSHQQKHRQH------------DLSPTWKQIVSDYLADHKM 53

Query:    97 CIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSL 156
              + ++ P+E  +   ++     L  L H + ++ +RV ++ + +G   +D+  AG R ++
Sbjct:    54 HVSAYSPAE-ADRLTHDDERAFLHSLQHVDVKSLARVADARIFEGCTADDLYGAG-REAV 111

Query:   157 QDGCTT----FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSF 210
             + G       F + V       A + +LS  W    IR   S  G + +  +V +NE + 
Sbjct:   112 RTGKVAARGGFAEFVAVMRGAGATLSILSVNWSASFIRGVLSQCGDDVVIEDVVSNEITA 171

Query:   211 KESIST-GEIIEKVESP----IDKVQAFNNTLEKYGTDRKNLS----VYIGDSVGDLLCL 261
                I   GE      +P    + K++A         +D   +S    +Y GDS  DL CL
Sbjct:   172 DGKIGCLGEGGGAQGTPMMTSLHKLEALR-ARSAASSDENEISSKITIYFGDSTTDLECL 230

Query:   262 LEADIGIVIGS--SSSLRRVGSQFG 284
             L ADIGIV+ +  +SSL R  ++ G
Sbjct:   231 LAADIGIVMANDENSSLLRALARLG 255

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPBC17G9.12c SPBC17G9.12c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 148 (57.2 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 80/311 (25%), Positives = 132/311 (42%)

Query:    32 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 91
             ++   DFD T T  D+  +LAE A+        N+PE              W ++S +Y 
Sbjct:     1 MLYIVDFDETITTYDTIHLLAE-AV--------NKPEE-------------WSVISDKYW 38

Query:    92 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 151
             +EY    E+   S  + +  Y  L   L    + E+ +  R+ +S    G++   +    
Sbjct:    39 QEYLAWREALPHSTTLTS--YLPL---LGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93

Query:   152 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF-SSAGLNA--LNVHANE 207
             + ++L+ G   F   +V +  ++  + HVLS  W   +I  +      L A  L VHAN+
Sbjct:    94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153

Query:   208 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 260
             F F  S +T  G I+ +  S +     DKV+ F   ++          VYIGDS  D  C
Sbjct:   154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213

Query:   261 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 319
             L  + I I++ S+     + S+F  V  + +    V+K      G          I+YT 
Sbjct:   214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA---VPGKK--------IIYTC 262

Query:   320 SSWAEVH-AFI 329
             S W  +  AF+
Sbjct:   263 SDWCAIQKAFL 273

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008150 "biological_process" evidence=ND

SGD|S000000608 YCR015C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 70/262 (26%), Positives = 114/262 (43%)

Query:    31 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTW--GLLSK 88
             + II SDFD T T VD+   +A++  +  P+    +PE        G    T+  G    
Sbjct:     2 KTIIISDFDETITRVDTICTIAKLPYLLNPRL---KPE-------WGHFTKTYMDGYHKY 51

Query:    89 QYTEEYE-QCIESFMPSE-KVENFNYETLHKALEQLSH---FEKRANSRVIESGVLKGIN 143
             +Y        + S +P+     NFN +     L+  +H    E  + + + +  + K I+
Sbjct:    52 KYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQQIFKSIS 110

Query:   144 LEDIKKAG-----ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 198
             L+ +K        E   L+DG  TF   VVKN    ++ +VLS  W  + I        L
Sbjct:   111 LDQMKTFARDQNHEDCLLRDGFKTFCSSVVKN--FESDFYVLSINWSKEFIHEVIGDRRL 168

Query:   199 NALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSV--- 249
                ++  N+    S K S S  GE   ++ +  DKV+     L+K   G +++  S    
Sbjct:   169 KNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKEGNSCSYW 228

Query:   250 YIGDSVGDLLCLLEADI-GIVI 270
             YIGDS  DLL +L     G+++
Sbjct:   229 YIGDSETDLLSILHPSTNGVLL 250

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

CGD|CAL0004824 orf19.6732 [Candida albicans (taxid:5476)]

 Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 51/202 (25%), Positives = 93/202 (46%)

Query:    88 KQYTEEYEQCIESF-MPSE---KVENFNYETLH-KALEQLSHFEKRANSRVIESGVLKGI 142
             + Y + Y     SF  P+     +E  +Y +   K  ++LS  E ++   + +S + +G+
Sbjct:    61 ESYNQNYTNLKNSFNFPNTTTTSIECSDYLSQQIKFQDELSTVENQSIELIEQSKIFEGL 120

Query:   143 NLEDIKKA----GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 198
               +D +        ++ L+ G   F Q V + +NLN  + ++S  W    I+   ++ GL
Sbjct:   121 TKKDFQDYVNINHNKIKLRPG---FSQFVKRCQNLNIPIIIVSANWTSIFIKQCLANHGL 177

Query:   199 NALNVHANEFSF-------KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYI 251
                ++  NE SF       K  ++T  + +K +  I   Q   + +++   ++  L +YI
Sbjct:   178 AVDDIITNELSFHSDDEEAKTKMTTTGLWDKSKYTIRTSQDKLDIVKQIQEEKDGLIMYI 237

Query:   252 GDSVGDLLCLLEADIGIVIGSS 273
             GDSV DLL LL  D    I  S
Sbjct:   238 GDSVTDLLPLLNVDFPCAIKGS 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      332       332   0.00090  116 3  11 22  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  230 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.00u 0.13s 31.13t   Elapsed:  00:00:01
  Total cpu time:  31.00u 0.13s 31.13t   Elapsed:  00:00:01
  Start:  Mon May 20 22:55:54 2013   End:  Mon May 20 22:55:55 2013

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023523001 SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (566 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	332
COG0560	212	COG0560, SerB, Phosphoserine phosphatase [Amino ac	9e-06
TIGR00338	219	TIGR00338, serB, phosphoserine phosphatase SerB	1e-05
pfam12710	122	pfam12710, HAD, haloacid dehalogenase-like hydrola	2e-04

>gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 7/98 (7%)

Query: 188 LIRASFS------SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYG 241
           +I   F+      +  L    V ANE    +   TG ++  +     K +A      + G
Sbjct: 98  IISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELG 157

Query: 242 TDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV 279
              +  +V  GDS  DL  L  A + I +     LR +
Sbjct: 158 IPLEE-TVAYGDSANDLPMLEAAGLPIAVNPKPKLRAL 194

Length = 212

>gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 46/190 (24%), Positives = 71/190 (37%), Gaps = 18/190 (9%)

Query: 94  YEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER 153
             + I+       VE    E   +A+     F+     RV    +LKG+ +E +K+  E 
Sbjct: 27  NAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERV---ALLKGLPVELLKEVREN 83

Query: 154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES 213
           L L +G     + V   +     V V+S    G  + A      L      AN    ++ 
Sbjct: 84  LPLTEGAE---ELVKTLKEKGYKVAVIS---GGFDLFAEHVKDKLGLDAAFANRLEVEDG 137

Query: 214 ISTGEIIEKVESPIDKVQAFNNTL----EKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 269
             TG     VE PI        TL     K G   +N +V +GD   DL  +  A +GI 
Sbjct: 138 KLTG----LVEGPIVDASYKGKTLLILLRKEGISPEN-TVAVGDGANDLSMIKAAGLGIA 192

Query: 270 IGSSSSLRRV 279
             +   L++ 
Sbjct: 193 FNAKPKLQQK 202

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219

>gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase

 Score = 40.3 bits (94), Expect = 2e-04
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 173 LNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 232
           L   V ++S      L+R    + G++ +NV   E    E++     +        K  A
Sbjct: 40  LLELVVIVSGS-PEPLVRPVAKALGIDDVNVVGTEL---ENVLVDGRLTGKLDGEGKAAA 95

Query: 233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCL 261
                +K G       V +GDS+ DL  L
Sbjct: 96  LKRLAQKIGRYP---VVAVGDSISDLPAL 121

Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	332
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.97
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.96
COG4359	220	Uncharacterized conserved protein [Function unknow	99.94
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.93
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.93
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.93
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.92
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.91
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.9
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	99.9
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.9
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.89
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.89
KOG3128	298	consensus Uncharacterized conserved protein [Funct	99.89
PRK11590	211	hypothetical protein; Provisional	99.88
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.88
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.87
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.83
PLN02954	224	phosphoserine phosphatase	99.83
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.83
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.73
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.72
PLN02177	497	glycerol-3-phosphate acyltransferase	99.62
PRK08238	479	hypothetical protein; Validated	99.54
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.29
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.28
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.26
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.23
PRK13288	214	pyrophosphatase PpaX; Provisional	99.21
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.2
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.2
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.19
PLN02575	381	haloacid dehalogenase-like hydrolase	99.13
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.11
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.11
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.11
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.1
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.1
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.09
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.08
PRK11587	218	putative phosphatase; Provisional	99.07
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.07
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.02
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.02
PRK09449	224	dUMP phosphatase; Provisional	99.02
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.01
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.01
COG0546	220	Gph Predicted phosphatases [General function predi	99.0
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.0
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.98
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.97
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.89
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	98.88
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.88
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.87
PLN02940	382	riboflavin kinase	98.86
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.85
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.85
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.83
PLN02499	498	glycerol-3-phosphate acyltransferase	98.81
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.8
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.78
COG4030	315	Uncharacterized protein conserved in archaea [Func	98.78
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.74
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.74
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.73
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.73
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.7
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.68
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	98.68
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.68
PHA02597	197	30.2 hypothetical protein; Provisional	98.66
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.65
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.63
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.63
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.6
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.58
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.56
PRK10748	238	flavin mononucleotide phosphatase; Provisional	98.53
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.52
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.51
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.5
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	98.47
PRK15122	903	magnesium-transporting ATPase; Provisional	98.43
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.43
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.43
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.41
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.41
PLN02811	220	hydrolase	98.39
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.37
PRK10671	834	copA copper exporting ATPase; Provisional	98.37
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.34
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.34
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	98.34
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	98.33
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.27
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.27
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.27
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.24
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	98.23
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	98.21
COG4087	152	Soluble P-type ATPase [General function prediction	98.2
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.17
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.16
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.14
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.14
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	98.05
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	98.01
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.93
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.91
PRK10513	270	sugar phosphate phosphatase; Provisional	97.9
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.89
PRK10976	266	putative hydrolase; Provisional	97.86
PRK06769	173	hypothetical protein; Validated	97.85
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.84
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.83
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.83
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	97.83
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.82
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.8
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.8
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.74
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	97.71
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	97.67
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.67
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.66
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.62
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.6
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.57
PLN02887	580	hydrolase family protein	97.56
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	97.51
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	97.49
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.49
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	97.48
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	97.45
PHA02530	300	pseT polynucleotide kinase; Provisional	97.45
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	97.42
PLN03190	1178	aminophospholipid translocase; Provisional	97.41
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	97.4
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.37
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	97.35
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.27
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	97.24
PLN02382	413	probable sucrose-phosphatase	97.22
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	97.2
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	97.2
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	97.17
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.12
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	97.11
COG0241	181	HisB Histidinol phosphatase and related phosphatas	97.11
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.09
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.08
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	97.07
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.02
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.94
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.91
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	96.89
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	96.79
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	96.79
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	96.79
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	96.53
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	96.32
PTZ00174	247	phosphomannomutase; Provisional	96.29
PLN02423	245	phosphomannomutase	95.82
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	95.63
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	95.51
COG4996	164	Predicted phosphatase [General function prediction	95.42
KOG0206	1151	consensus P-type ATPase [General function predicti	95.27
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	95.27
COG2503	274	Predicted secreted acid phosphatase [General funct	95.21
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	94.91
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.83
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	94.82
PLN02580	384	trehalose-phosphatase	94.68
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	94.23
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	94.09
PRK01158	230	phosphoglycolate phosphatase; Provisional	94.06
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	94.05
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	94.03
COG3700	237	AphA Acid phosphatase (class B) [General function	93.93
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.9
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	93.7
PRK10513	270	sugar phosphate phosphatase; Provisional	93.12
PRK10976	266	putative hydrolase; Provisional	93.04
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	93.03
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	92.84
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	92.62
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	92.55
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	92.19
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	91.83
PLN02588	525	glycerol-3-phosphate acyltransferase	91.71
PLN02645	311	phosphoglycolate phosphatase	91.26
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	90.66
PTZ00445	219	p36-lilke protein; Provisional	90.55
PLN02887	580	hydrolase family protein	89.72
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	89.49
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	89.24
PF09949	100	DUF2183: Uncharacterized conserved protein (DUF218	88.86
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	87.48
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	87.03
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	86.4
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	86.19
KOG2116	738	consensus Protein involved in plasmid maintenance/	86.09
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	85.8
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	85.47
COG4229	229	Predicted enolase-phosphatase [Energy production a	84.79
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	84.14
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	83.69
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	82.74
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	81.18

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.97  E-value=5.3e-30  Score=236.10  Aligned_cols=228  Identities=18%  Similarity=0.277  Sum_probs=186.2

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +++++||+|||.|||+.-+        ..++++.            |+|++......+++.|.++..+++++|+|+|.++
T Consensus        20 ~~~lqvisDFD~Tlt~~~~--------~~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~   79 (277)
T TIGR01544        20 AAKLQIISDFDYTLSRFSY--------EDGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDP   79 (277)
T ss_pred             hhheEEeeccCccceeeec--------CCCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecCC
Confidence            6899999999999997432        2334443            4677888889999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG  186 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~  186 (332)
                      .++++++.+||.   |||.+++..+.+.    +++++++.++++  .+.++||+.+|++.|+++|   ++++|+|+|+ .
T Consensus        80 ~~~~~eK~~~m~---eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-~  148 (277)
T TIGR01544        80 VLTVEEKYPYMV---EWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-G  148 (277)
T ss_pred             CCChHHhhhHHH---HHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-H
Confidence            999999999965   8999999999876    589999999987  8999999999999999999   9999999998 8


Q ss_pred             HHHHHHHHhcCC--CcceEEeeeeEEc-CceecccccccCCCCcchHHHHHH-HHHHhC-CCCCceEEEEeCCccchHHh
Q 020024          187 DLIRASFSSAGL--NALNVHANEFSFK-ESISTGEIIEKVESPIDKVQAFNN-TLEKYG-TDRKNLSVYIGDSVGDLLCL  261 (332)
Q Consensus       187 ~~I~~~l~~~g~--~~~~I~aN~l~~~-~g~~tG~~~~~~~~~~~K~~~l~~-~~~~~~-~~~~~~viyiGDs~~Dl~~l  261 (332)
                      .+|+.+|+++|+  ++.+|+||.|.|+ +|+++| +.++.....+|.+.+.+ .....+ ...+.++|++|||.||++|+
T Consensus       149 ~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma  227 (277)
T TIGR01544       149 NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMA  227 (277)
T ss_pred             HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence            999999998887  5679999999995 699999 56677777889876664 333333 12357899999999999997


Q ss_pred             hhcC-------eeEEEcCC-hhHHHHhHhcCCeee
Q 020024          262 LEAD-------IGIVIGSS-SSLRRVGSQFGVTFI  288 (332)
Q Consensus       262 ~~Ad-------~gvv~~~~-~~L~~~~~~~~~~~~  288 (332)
                      .-..       ||++-..- ..|.+|-..+.+-++
T Consensus       228 ~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~  262 (277)
T TIGR01544       228 DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV  262 (277)
T ss_pred             cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence            7652       13322221 467778887776555

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.96  E-value=2.8e-28  Score=218.50  Aligned_cols=199  Identities=21%  Similarity=0.199  Sum_probs=166.1

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +++.+++||||+|||...+++.+++...                      .......++...+..               
T Consensus         3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~---------------   45 (212)
T COG0560           3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRG---------------   45 (212)
T ss_pred             CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhcc---------------
Confidence            4678999999999999777777777542                      122233333222222               


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD  187 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~-i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~  187 (332)
                            +++|.+.++       .+   ..+++|++.+.+.++.+. +.++||+.+++++|++.|   +.++|||+|+ ..
T Consensus        46 ------~~~~~~~~~-------~~---v~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~  105 (212)
T COG0560          46 ------ELDFEESLR-------LR---VALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF  105 (212)
T ss_pred             ------cccHHHHHH-------HH---HHHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence                  223333222       22   478899999999999998 999999999999999999   9999999998 78


Q ss_pred             HHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          188 LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       188 ~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      +++++.+.+|+  .++++|.++.++|++||...++++.+.+|..+++++....+.. .+++++||||.||+|||..|+.|
T Consensus       106 lv~~ia~~lg~--d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~  182 (212)
T COG0560         106 LVEPIAERLGI--DYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP  182 (212)
T ss_pred             HHHHHHHHhCC--chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC
Confidence            99999999887  6899999999989999999999999999999999999988874 46899999999999999999999


Q ss_pred             EEEcCChhHHHHhHhcCCee
Q 020024          268 IVIGSSSSLRRVGSQFGVTF  287 (332)
Q Consensus       268 vv~~~~~~L~~~~~~~~~~~  287 (332)
                      +++++++.|.+.+...+|+.
T Consensus       183 ia~n~~~~l~~~a~~~~~~~  202 (212)
T COG0560         183 IAVNPKPKLRALADVRIWPI  202 (212)
T ss_pred             eEeCcCHHHHHHHHHhcChh
Confidence            99999999999999999976

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.94  E-value=1.2e-25  Score=190.80  Aligned_cols=203  Identities=18%  Similarity=0.244  Sum_probs=149.4

Q ss_pred             CceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 020024           30 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN  109 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~  109 (332)
                      ++..+++|||||||..|+.+.|....                       ...+|..+.+..+.+               +
T Consensus         2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~---------------t   43 (220)
T COG4359           2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSK---------------T   43 (220)
T ss_pred             CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhC---------------c
Confidence            46799999999999999998877643                       345676554433332               2


Q ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          110 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       110 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~-~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                      ++..+.+..|-              .+   -+.+.+++.+.+ +++.|+|||++|++|+++++   +|++|||+|. ..|
T Consensus        44 iS~rd~~g~mf--------------~~---i~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f  102 (220)
T COG4359          44 ISFRDGFGRMF--------------GS---IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF  102 (220)
T ss_pred             eeHHHHHHHHH--------------Hh---cCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence            44444433221              11   134677777775 46999999999999999999   9999999997 899


Q ss_pred             HHHHHHhcC----CCcceEEeeeeEEcC-ceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhh
Q 020024          189 IRASFSSAG----LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE  263 (332)
Q Consensus       189 I~~~l~~~g----~~~~~I~aN~l~~~~-g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~  263 (332)
                      |.++++..+    +..++|++|+..+.. |-..-.......+|.||...++.+.+.     +..++|+|||.+|+.+++.
T Consensus       103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl  177 (220)
T COG4359         103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL  177 (220)
T ss_pred             HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence            999998764    344566666666642 321111123467899999999988754     4579999999999999999


Q ss_pred             cCeeEEEcCChhHHHHhHhcCCeeeecCc--hhhhhhh
Q 020024          264 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKKQK  299 (332)
Q Consensus       264 Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~--~~~~~~~  299 (332)
                      +|  ++++.+ .|..+|++++++|+||++  .+++.++
T Consensus       178 sD--llFAK~-~L~nyc~eqn~~f~~fe~F~eIlk~ie  212 (220)
T COG4359         178 SD--LLFAKD-DLLNYCREQNLNFLEFETFYEILKEIE  212 (220)
T ss_pred             hh--hHhhHH-HHHHHHHHcCCCCcccccHHHHHHHHH
Confidence            99  677755 799999999999999987  4555443

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.93  E-value=4.4e-25  Score=198.16  Aligned_cols=193  Identities=17%  Similarity=0.174  Sum_probs=142.7

Q ss_pred             EEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCCCH
Q 020024           33 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNY  112 (332)
Q Consensus        33 lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~~~~  112 (332)
                      +++||||||||+.||+..+++..                       +.+.|..+.+.++++               ++++
T Consensus         1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g---------------~~~~   42 (214)
T TIGR03333         1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSK---------------TLSI   42 (214)
T ss_pred             CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcC---------------CccH
Confidence            48999999999999988776632                       235666555444332               2444


Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHH
Q 020024          113 ETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA  191 (332)
Q Consensus       113 ~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~-~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~  191 (332)
                      .+.+..+                ..+++.-..+++.+++ +.++++||+.+++++++++|   ++++|+|+|. ..+|+.
T Consensus        43 ~e~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~  102 (214)
T TIGR03333        43 QEGVGRM----------------FGLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP  102 (214)
T ss_pred             HHHHHHH----------------HhhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence            4444321                1222222345777764 46899999999999999998   9999999996 899999


Q ss_pred             HHHhcCCCcceEEeeeeEEcCceecccccc------cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          192 SFSSAGLNALNVHANEFSFKESISTGEIIE------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       192 ~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~------~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      +++.++. ...|+||++.++++..++....      ...+|.||..+++++...     +.+++|||||.||+++++.||
T Consensus       103 il~~~~~-~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad  176 (214)
T TIGR03333       103 LLEGIVE-KDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSD  176 (214)
T ss_pred             HHHhhCC-cccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCC
Confidence            9987643 3689999999987655543321      123488999999987642     357999999999999999999


Q ss_pred             eeEEEcCChhHHHHhHhcCCeeeecCc
Q 020024          266 IGIVIGSSSSLRRVGSQFGVTFIPLYP  292 (332)
Q Consensus       266 ~gvv~~~~~~L~~~~~~~~~~~~p~~~  292 (332)
                      +  +++.+ .|..+|++++.++.||..
T Consensus       177 ~--~~ar~-~l~~~~~~~~~~~~~~~~  200 (214)
T TIGR03333       177 L--CFARD-YLLNECEELGLNHAPFQD  200 (214)
T ss_pred             e--eEehH-HHHHHHHHcCCCccCcCC
Confidence            5  55555 688999999999999976

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.93  E-value=1.3e-24  Score=195.74  Aligned_cols=195  Identities=19%  Similarity=0.191  Sum_probs=142.0

Q ss_pred             ceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCC
Q 020024           31 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF  110 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~~  110 (332)
                      +.+++||||||||+.|+...+++-.                       ..+.|..+.+.|+++.               +
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~g~---------------~   44 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKKF-----------------------APPEWEELKDDILSQE---------------L   44 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHHh-----------------------CHHHHHHHHHHHHhCC---------------c
Confidence            5599999999999999976544321                       1245666655554432               3


Q ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 020024          111 NYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI  189 (332)
Q Consensus       111 ~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~-~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I  189 (332)
                      ++.+....+                ...+.+-..+++.+.. +.+.++||+.+++++++++|   ++++|+|+|+ ..+|
T Consensus        45 ~~~~~~~~~----------------~~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~i  104 (219)
T PRK09552         45 SIQEGVGQM----------------FQLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFFV  104 (219)
T ss_pred             CHHHHHHHH----------------HHhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHHH
Confidence            333333321                1224444457777764 57899999999999999999   9999999998 8999


Q ss_pred             HHHHHhcCCCcceEEeeeeEEcCceecccccccC------CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhh
Q 020024          190 RASFSSAGLNALNVHANEFSFKESISTGEIIEKV------ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE  263 (332)
Q Consensus       190 ~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~------~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~  263 (332)
                      +++++.+ +....++||.+.++++..+.....+.      .++.+|..+++++...     ..++||||||.+|+++++.
T Consensus       105 ~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~-----~~~~i~iGDs~~Di~aa~~  178 (219)
T PRK09552        105 YPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT-----NDFHIVIGDSITDLEAAKQ  178 (219)
T ss_pred             HHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC-----CCCEEEEeCCHHHHHHHHH
Confidence            9999987 65567999999987654443221111      2467899888876432     3589999999999999999


Q ss_pred             cCeeEEEcCChhHHHHhHhcCCeeeecCc
Q 020024          264 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP  292 (332)
Q Consensus       264 Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~  292 (332)
                      ||+  +++.+ .|.++|++++|+++||++
T Consensus       179 Ag~--~~a~~-~l~~~~~~~~~~~~~~~~  204 (219)
T PRK09552        179 ADK--VFARD-FLITKCEELGIPYTPFET  204 (219)
T ss_pred             CCc--ceeHH-HHHHHHHHcCCCccccCC
Confidence            996  44433 788999999999999976

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.93  E-value=9.7e-25  Score=206.96  Aligned_cols=194  Identities=19%  Similarity=0.198  Sum_probs=156.5

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +.+.+++|||||||+..++++.+++..  +                    ....+..+++.++.+               
T Consensus       108 ~~~~LvvfDmDGTLI~~e~i~eia~~~--g--------------------~~~~v~~it~~~m~G---------------  150 (322)
T PRK11133        108 RTPGLLVMDMDSTAIQIECIDEIAKLA--G--------------------TGEEVAEVTERAMRG---------------  150 (322)
T ss_pred             cCCCEEEEECCCCCcchHHHHHHHHHh--C--------------------CchHHHHHHHHHHcC---------------
Confidence            466899999999999999999988854  1                    234444444433322               


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                            +++|.++++       .++   ..++|.+.+.+.+..+.++++||+.++++.|+++|   +++.|+|+|+ ..+
T Consensus       151 ------eldf~esl~-------~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~  210 (322)
T PRK11133        151 ------ELDFEASLR-------QRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF  210 (322)
T ss_pred             ------CcCHHHHHH-------HHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence                  223333222       233   45688887778777788999999999999999999   9999999998 778


Q ss_pred             HHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          189 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       189 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ++..++++|+  .++++|.+++.+|..||.+.+.+..+.+|...++++..+.+.. ..++++||||.||++|++.||+||
T Consensus       211 ~~~l~~~Lgl--d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgi  287 (322)
T PRK11133        211 ADYLRDKLRL--DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGI  287 (322)
T ss_pred             HHHHHHHcCC--CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence            8888888777  6889999999999999988877777889999999999888863 578999999999999999999999


Q ss_pred             EEcCChhHHHHhHh
Q 020024          269 VIGSSSSLRRVGSQ  282 (332)
Q Consensus       269 v~~~~~~L~~~~~~  282 (332)
                      ++++++.+++.|..
T Consensus       288 A~nAkp~Vk~~Ad~  301 (322)
T PRK11133        288 AYHAKPKVNEQAQV  301 (322)
T ss_pred             EeCCCHHHHhhCCE
Confidence            99999988776643

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.92  E-value=1.2e-23  Score=188.49  Aligned_cols=133  Identities=12%  Similarity=0.102  Sum_probs=109.9

Q ss_pred             hhhcCCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-CcceEEe
Q 020024          136 SGVLKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHA  205 (332)
Q Consensus       136 ~~~f~G~~~~~l~~~~~--------~i~lrpg~~e~l~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~a  205 (332)
                      ..+|+|++.+++.+..+        ...++||+.+.++ .++++|   ++++|||++. ..+++++++..++ ...+++|
T Consensus        67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~  142 (210)
T TIGR01545        67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA  142 (210)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence            46788999988876543        2368999999997 556678   9999999986 7888888876443 3468999


Q ss_pred             eeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHH
Q 020024          206 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV  279 (332)
Q Consensus       206 N~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~  279 (332)
                      +++++.+|   |.+.+++|.|.+|++++++++..    .....++||||.+|+|||..||.+++++|++.|.++
T Consensus       143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~~  209 (210)
T TIGR01545       143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQL  209 (210)
T ss_pred             EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhccc
Confidence            99998665   66778899999999999999842    235678999999999999999999999999988754

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.91  E-value=3.2e-23  Score=187.28  Aligned_cols=137  Identities=18%  Similarity=0.242  Sum_probs=106.5

Q ss_pred             CCCCHHHHHHHhhcCCCChhHHHHHHHHHH--cCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcC-ce
Q 020024          140 KGINLEDIKKAGERLSLQDGCTTFFQKVVK--NENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKE-SI  214 (332)
Q Consensus       140 ~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~--~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~-g~  214 (332)
                      .|++.+++.+..+.+++.||+.++++.+.+  .|   .+++|||++. ..||+.+|+.+|+...  +|++|...|++ |.
T Consensus        56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~~~---~~~~IiSDaN-s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~  131 (234)
T PF06888_consen   56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQRG---FDLIIISDAN-SFFIETILEHHGLRDCFSEIFTNPACFDADGR  131 (234)
T ss_pred             cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcCCC---ceEEEEeCCc-HhHHHHHHHhCCCccccceEEeCCceecCCce
Confidence            379999999999999999999999999954  45   9999999996 8999999999998643  89999999975 64


Q ss_pred             ec-cccc---c-cCCCCcchHHHHHHHHHHhCC--CCCceEEEEeCCccchHHhhh---cCeeEEEcCC-hhHHHHhHh
Q 020024          215 ST-GEII---E-KVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDLLCLLE---ADIGIVIGSS-SSLRRVGSQ  282 (332)
Q Consensus       215 ~t-G~~~---~-~~~~~~~K~~~l~~~~~~~~~--~~~~~viyiGDs~~Dl~~l~~---Ad~gvv~~~~-~~L~~~~~~  282 (332)
                      +. .++.   + .+..++||..+|++++.....  ..++++||||||.||+|+++.   +|  +|+... =.|.+...+
T Consensus       132 l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~~~~l~~~i~~  208 (234)
T PF06888_consen  132 LRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRKGYPLHKLIQK  208 (234)
T ss_pred             EEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCCCChHHHHHhc
Confidence            32 1222   2 244558999999999976411  136899999999999999985   67  566544 234444433

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.90  E-value=8.7e-23  Score=180.82  Aligned_cols=134  Identities=21%  Similarity=0.169  Sum_probs=117.0

Q ss_pred             hhhcCCCCHHHHHHHhhc-------CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeee
Q 020024          136 SGVLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF  208 (332)
Q Consensus       136 ~~~f~G~~~~~l~~~~~~-------i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l  208 (332)
                      ...|+|++.+++.++++.       ..++||+.++++.++++|   .+++|+|++. ..+++.+++.+|+  .+++++++
T Consensus        61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l  134 (202)
T TIGR01490        61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL  134 (202)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence            457899999999887653       469999999999999999   9999999997 8899999998887  46899999


Q ss_pred             EE-cCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhH
Q 020024          209 SF-KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL  276 (332)
Q Consensus       209 ~~-~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L  276 (332)
                      .+ ++|.+||++.++.+.+..|...+++++.+.+.+ .+++++||||.+|++|+..|+.++++++++.|
T Consensus       135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~l  202 (202)
T TIGR01490       135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKKL  202 (202)
T ss_pred             EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCCC
Confidence            98 678999998877888999999999999876652 46899999999999999999999999988643

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=99.90  E-value=1.6e-23  Score=188.87  Aligned_cols=200  Identities=22%  Similarity=0.381  Sum_probs=146.2

Q ss_pred             ccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--
Q 020024           75 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--  152 (332)
Q Consensus        75 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~--  152 (332)
                      ++|++......+++.|.++..+++++|+|+|.++.++++++.++|+   |||+++|..+++.    +++++++.++++  
T Consensus        15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p~M~---EWw~kah~llv~~----~l~k~~i~~~V~~s   87 (246)
T PF05822_consen   15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIPHME---EWWTKAHELLVEQ----GLTKSEIEEAVKES   87 (246)
T ss_dssp             -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHHHHH---HHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred             ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHHH---HHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence            4677888888899999999999999999999999999999999864   8999999999987    699999999987  


Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC--CcceEEeeeeEEcC-ceecccccccCCCCcch
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL--NALNVHANEFSFKE-SISTGEIIEKVESPIDK  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~--~~~~I~aN~l~~~~-g~~tG~~~~~~~~~~~K  229 (332)
                      .+.||+|+.+|++.|++++   +|+.|+|||. +++|+.+|++.|.  ++++|+||.+.|++ |+..| |.+++....+|
T Consensus        88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK  162 (246)
T PF05822_consen   88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK  162 (246)
T ss_dssp             ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred             chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence            5899999999999999988   9999999999 9999999998874  68899999999965 88877 55666666778


Q ss_pred             HH-HHH--HHHHHhCCCCCceEEEEeCCccchHHhhhc-Ce------eEEEcCC-hhHHHHhHhcCCeee
Q 020024          230 VQ-AFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DI------GIVIGSS-SSLRRVGSQFGVTFI  288 (332)
Q Consensus       230 ~~-~l~--~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A-d~------gvv~~~~-~~L~~~~~~~~~~~~  288 (332)
                      .. +++  .+...  ...+.+++..|||.+|+.|..-+ +.      |++-..- ..|.+|.+.+.+-++
T Consensus       163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv  230 (246)
T PF05822_consen  163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV  230 (246)
T ss_dssp             HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred             CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence            65 331  12222  22357999999999999998776 32      4332222 368888887776554

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.90  E-value=6.4e-23  Score=177.55  Aligned_cols=121  Identities=21%  Similarity=0.249  Sum_probs=102.6

Q ss_pred             hhcCCCCHHHHHH-H-hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEc-Cc
Q 020024          137 GVLKGINLEDIKK-A-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ES  213 (332)
Q Consensus       137 ~~f~G~~~~~l~~-~-~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g  213 (332)
                      ..+++...+++.+ + .+.+.++||+.++++.++++|   ++++|+|++. ..+|+.+++.+|+  .++++|.+.++ +|
T Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i~~~~~~~g~--~~~~~~~~~~~~~g  126 (177)
T TIGR01488        53 ALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFVEPVAEKLGI--DDVFANRLEFDDNG  126 (177)
T ss_pred             HHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--chheeeeEEECCCC
Confidence            5567777666665 5 457889999999999999999   9999999997 8999999999887  47999999995 68


Q ss_pred             eecccccc-cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc
Q 020024          214 ISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA  264 (332)
Q Consensus       214 ~~tG~~~~-~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A  264 (332)
                      .++|++.+ +++.+.+|...++++....+.. +.+++|||||.||++|++.|
T Consensus       127 ~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       127 LLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             EEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence            88987765 5678899999999998876553 46899999999999999865

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.89  E-value=4.6e-22  Score=178.45  Aligned_cols=138  Identities=22%  Similarity=0.304  Sum_probs=118.4

Q ss_pred             hhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceec
Q 020024          137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST  216 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t  216 (332)
                      ..|.+.+.+.+.+..+.++++||+.++++.++++|   ++++|+|+|+ ..+++.+++.+|+  .++++|.+.++++.++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~  140 (219)
T TIGR00338        67 ALLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGL--DAAFANRLEVEDGKLT  140 (219)
T ss_pred             HHhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--CceEeeEEEEECCEEE
Confidence            34567788888888888999999999999999998   9999999997 8999999998887  4689999999988888


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhH
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS  281 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~  281 (332)
                      |...++...+.+|...++.++.+.+.. ..+++|||||.+|++++..|++++++++++.|.+.+.
T Consensus       141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~  204 (219)
T TIGR00338       141 GLVEGPIVDASYKGKTLLILLRKEGIS-PENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD  204 (219)
T ss_pred             EEecCcccCCcccHHHHHHHHHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence            877666566667999999888877663 4689999999999999999999999998887776554

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.89  E-value=2.4e-22  Score=179.14  Aligned_cols=128  Identities=20%  Similarity=0.220  Sum_probs=112.6

Q ss_pred             CCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC-ceeccc
Q 020024          140 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGE  218 (332)
Q Consensus       140 ~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~  218 (332)
                      .|++.+++.+..+.++++||+.+++++++++    .+++|||+|+ ..+++++++.+|+  .+++||++++++ |.+||.
T Consensus        53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi--~~~~an~l~~~~~g~~tG~  125 (203)
T TIGR02137        53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGY  125 (203)
T ss_pred             CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCC--chhhceeeEEecCCeeECe
Confidence            3999999999999999999999999999984    4999999998 8999999999887  479999999988 888886


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHh
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~  282 (332)
                      ..   ..+.+|..+++.+. ..+    .++++||||.||++|++.||+||++++++.+++.|.+
T Consensus       126 ~~---~~~~~K~~~l~~l~-~~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~  181 (203)
T TIGR02137       126 QL---RQKDPKRQSVIAFK-SLY----YRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQ  181 (203)
T ss_pred             ee---cCcchHHHHHHHHH-hhC----CCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCC
Confidence            43   44668999999884 332    4799999999999999999999999999999888866

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.89  E-value=1.7e-23  Score=185.73  Aligned_cols=228  Identities=17%  Similarity=0.267  Sum_probs=171.9

Q ss_pred             CCCceEEEEeCCCCcccccchHHHHHHHHH-hCCCCCCCCCcccccccccccccc-hhhhhHHHHHHHHHHHHhhcCCCC
Q 020024           28 AGDRLIIFSDFDLTCTIVDSSAILAEIAIV-TAPKSDQNQPENQLGRMSSGELRN-TWGLLSKQYTEEYEQCIESFMPSE  105 (332)
Q Consensus        28 ~~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~y~~~~~~~~~~~~p~~  105 (332)
                      .+.++.+|+|||.|||+         +++. ++++++            ++...+ ....+.+.|.++..+++.+|+|+|
T Consensus        35 ga~~~~vIsdfd~TLSr---------fa~~~G~r~pS------------~~~Vfd~~~~~~~~e~~~k~~~LyhkY~PIE   93 (298)
T KOG3128|consen   35 GAGKLQVISDFDYTLSR---------FATEQGKRCPS------------CFGVFDDNVKRLKPECRAKFVALYHKYYPIE   93 (298)
T ss_pred             CccceeEeecCchhHHH---------HHHhhcCcCCc------------cccchhhhhhcCCHHHHHHHHHHHhhccCcc
Confidence            36889999999999996         5554 555653            455666 788889999999999999999999


Q ss_pred             cccCCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccc
Q 020024          106 KVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYC  183 (332)
Q Consensus       106 ~~~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g  183 (332)
                      .++.++++++.+||+   |||.+||..+++.    |++++++++.+.  .+.+|+|..+|+..|++++   +|+.|.|+|
T Consensus        94 idP~ltieEKvp~Me---eWW~kSH~Lliq~----~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAG  163 (298)
T KOG3128|consen   94 IDPVLTIEEKVPHME---EWWTKSHELLIQG----GFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAG  163 (298)
T ss_pred             cCCCCChhhhchHHH---HHHhcccceeecC----CcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecc
Confidence            999999999999975   8999999999875    799999999976  5899999999999999999   999999999


Q ss_pred             cCHHHHHHHHHhcC-C-CcceEEeeeeEEc-CceecccccccCCCCcchH-HHHHHHHHHhC-CCCCceEEEEeCCccch
Q 020024          184 WCGDLIRASFSSAG-L-NALNVHANEFSFK-ESISTGEIIEKVESPIDKV-QAFNNTLEKYG-TDRKNLSVYIGDSVGDL  258 (332)
Q Consensus       184 ~s~~~I~~~l~~~g-~-~~~~I~aN~l~~~-~g~~tG~~~~~~~~~~~K~-~~l~~~~~~~~-~~~~~~viyiGDs~~Dl  258 (332)
                      + .+.|+.++++.. + ++.++.||-+.|+ +|...| |..++....+|. ..++.....+. ...+.++|+.|||.+|+
T Consensus       164 i-gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl  241 (298)
T KOG3128|consen  164 I-GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDL  241 (298)
T ss_pred             h-HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccc
Confidence            9 999999997643 2 6789999999998 455443 333333333343 22222111111 11357999999999999


Q ss_pred             HHhhhcC-eeEE----EcCC---hhHHHHhHhcCCeee
Q 020024          259 LCLLEAD-IGIV----IGSS---SSLRRVGSQFGVTFI  288 (332)
Q Consensus       259 ~~l~~Ad-~gvv----~~~~---~~L~~~~~~~~~~~~  288 (332)
                      .|...+- .+-.    +..+   ..+.+|-..+++-.+
T Consensus       242 ~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~  279 (298)
T KOG3128|consen  242 HMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV  279 (298)
T ss_pred             hhhcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence            9988753 2211    2222   366777777776444

>PRK11590 hypothetical protein; Provisional

Probab=99.88  E-value=2.3e-21  Score=173.72  Aligned_cols=130  Identities=12%  Similarity=0.061  Sum_probs=107.1

Q ss_pred             cCCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-CcceEEeeee
Q 020024          139 LKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHANEF  208 (332)
Q Consensus       139 f~G~~~~~l~~~~~--------~i~lrpg~~e~l~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~aN~l  208 (332)
                      +.|++.+++.+..+        .+.++||+.++++ .++++|   ++++|+|++. ..+++++++.+|+ ...+++|+++
T Consensus        71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l  146 (211)
T PRK11590         71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM  146 (211)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence            34677766654432        2577999999995 566678   9999999996 8889999988773 2368999999


Q ss_pred             EEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHH
Q 020024          209 SFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV  279 (332)
Q Consensus       209 ~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~  279 (332)
                      ++   .+||++.+++|.|.+|++++++++..    .....++||||.+|+|||..|+.+++++|++.|.++
T Consensus       147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~~  210 (211)
T PRK11590        147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQL  210 (211)
T ss_pred             EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhcc
Confidence            87   68899999999999999999999842    235778999999999999999999999999988764

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.88  E-value=1.8e-22  Score=173.03  Aligned_cols=176  Identities=19%  Similarity=0.192  Sum_probs=143.7

Q ss_pred             CceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 020024           30 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN  109 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~  109 (332)
                      ..-+++||+|+|++..+.|+.|+.+....                      .+-.+++                     +
T Consensus        15 ~~~aVcFDvDSTvi~eEgIdelA~~~G~~----------------------~~Va~~T---------------------~   51 (227)
T KOG1615|consen   15 SADAVCFDVDSTVIQEEGIDELAAYCGVG----------------------EAVAEVT---------------------R   51 (227)
T ss_pred             hcCeEEEecCcchhHHhhHHHHHHHhCch----------------------HHHHHHH---------------------H
Confidence            45699999999999999999999986321                      1111122                     2


Q ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh--hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 020024          110 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG--ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD  187 (332)
Q Consensus       110 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~--~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~  187 (332)
                      ..|.+.++|.++|+       .|+   .++++ +..++.+..  +.+.+.||+++|+..|+++|   ..++++|+|| ..
T Consensus        52 rAMng~~~F~eaL~-------~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~~  116 (227)
T KOG1615|consen   52 RAMNGEADFQEALA-------ARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-RQ  116 (227)
T ss_pred             HHhCCCCcHHHHHH-------HHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-HH
Confidence            66888889988887       444   78888 455555553  37899999999999999999   9999999999 99


Q ss_pred             HHHHHHHhcCCCcceEEeeeeEEcC-ceecc-cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          188 LIRASFSSAGLNALNVHANEFSFKE-SISTG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       188 ~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG-~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      +|.++...+|++...|+||.|.|+. |.++| ...++...+.+|..++.++++.++   +..+++||||.||++++.-|+
T Consensus       117 ~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~---~~~~~mvGDGatDlea~~pa~  193 (227)
T KOG1615|consen  117 LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN---YKTIVMVGDGATDLEAMPPAD  193 (227)
T ss_pred             HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC---hheeEEecCCccccccCCchh
Confidence            9999999999987789999999974 88887 556778888899999998887443   478999999999999999877


Q ss_pred             e
Q 020024          266 I  266 (332)
Q Consensus       266 ~  266 (332)
                      .
T Consensus       194 a  194 (227)
T KOG1615|consen  194 A  194 (227)
T ss_pred             h
Confidence            4

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.87  E-value=6.3e-21  Score=168.19  Aligned_cols=134  Identities=19%  Similarity=0.161  Sum_probs=109.6

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC-ceecccc
Q 020024          141 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGEI  219 (332)
Q Consensus       141 G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~~  219 (332)
                      ....+++.+..+.+.++||+.+++++|+++|   ++++|+|+++ ..+++.+++.+|+  .++++|.+.+++ |..+|..
T Consensus        66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~  139 (201)
T TIGR01491        66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG  139 (201)
T ss_pred             CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence            3467778888888999999999999999999   9999999997 8999999999887  478899988864 6655532


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHh
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~  282 (332)
                      . ......+|...++++++..+.+ ..+++|||||.+|+++++.||+++++++++.|+++|+.
T Consensus       140 ~-~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~  200 (201)
T TIGR01491       140 I-VRVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD  200 (201)
T ss_pred             e-eEEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence            1 1122346888888888776653 46899999999999999999999999999888888753

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.83  E-value=2.4e-19  Score=156.33  Aligned_cols=122  Identities=17%  Similarity=0.182  Sum_probs=100.5

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcC-ceecc
Q 020024          141 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKE-SISTG  217 (332)
Q Consensus       141 G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~-g~~tG  217 (332)
                      +++.+++.+...+++++||+.++++.++++|   ++++|+|++. ..+++.+++.+|+..  ..|++|+..+++ |.+++
T Consensus        58 ~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~  133 (188)
T TIGR01489        58 GLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDGN-DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIV  133 (188)
T ss_pred             CCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHHcCChhheeEEeccCceECCCCcEEE
Confidence            5778888888888999999999999999988   9999999985 889999998888753  379999999975 66665


Q ss_pred             cccc-----cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          218 EIIE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       218 ~~~~-----~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      ....     +...+.+|...+++++..+    +.+++|||||.+|+++++.||  ++++.
T Consensus       134 ~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~ar  187 (188)
T TIGR01489       134 WPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVFAK  187 (188)
T ss_pred             ecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--ccccC
Confidence            4332     3456778999999887643    368999999999999999998  56653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PLN02954 phosphoserine phosphatase

Probab=99.83  E-value=2.2e-19  Score=161.64  Aligned_cols=180  Identities=19%  Similarity=0.195  Sum_probs=127.7

Q ss_pred             CceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 020024           30 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN  109 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~  109 (332)
                      ...+++||||||||+.|++..+++..                      +..+.|..+.+.|+.+               .
T Consensus        11 ~~k~viFDfDGTL~~~~~~~~~~~~~----------------------g~~~~~~~~~~~~~~g---------------~   53 (224)
T PLN02954         11 SADAVCFDVDSTVCVDEGIDELAEFC----------------------GAGEAVAEWTAKAMGG---------------S   53 (224)
T ss_pred             cCCEEEEeCCCcccchHHHHHHHHHc----------------------CChHHHHHHHHHHHCC---------------C
Confidence            34689999999999999987776642                      1234555554444332               1


Q ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhc--CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 020024          110 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD  187 (332)
Q Consensus       110 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~--i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~  187 (332)
                      +++++.+...             +   .+++ .+.+++.+..+.  ..++||+.+++++++++|   ++++|+|+|. ..
T Consensus        54 ~~~~~~~~~~-------------~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~  112 (224)
T PLN02954         54 VPFEEALAAR-------------L---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF-RQ  112 (224)
T ss_pred             CCHHHHHHHH-------------H---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-HH
Confidence            3433332221             1   1122 255666666553  679999999999999998   9999999997 89


Q ss_pred             HHHHHHHhcCCCcceEEeeeeEEcC-ceecccccc-cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          188 LIRASFSSAGLNALNVHANEFSFKE-SISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       188 ~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~~~~-~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      +++.+++.+|++..++++|.+.+++ |.++|.... ..+.+.+|...++.+....+.   .+++|||||.+|+++++.++
T Consensus       113 ~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~~  189 (224)
T PLN02954        113 MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKPGG  189 (224)
T ss_pred             HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhcCC
Confidence            9999999999865579999999864 667764322 223456799999888876553   58999999999999988855


Q ss_pred             eeEEE
Q 020024          266 IGIVI  270 (332)
Q Consensus       266 ~gvv~  270 (332)
                      ..+++
T Consensus       190 ~~~~~  194 (224)
T PLN02954        190 ADLFI  194 (224)
T ss_pred             CCEEE
Confidence            44444

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.83  E-value=1e-19  Score=159.11  Aligned_cols=177  Identities=16%  Similarity=0.249  Sum_probs=130.5

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHH-HHHHHhhcCCCCcc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEE-YEQCIESFMPSEKV  107 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~~~p~~~~  107 (332)
                      ..+.+++||||.||++.||.+-+.+.+.                      .......+.+.|-++ |..++         
T Consensus        11 ~~ril~~FDFD~TIid~dSD~wVv~~lp----------------------~~~l~~qL~~t~p~~~Wne~M---------   59 (256)
T KOG3120|consen   11 SPRILLVFDFDRTIIDQDSDNWVVDELP----------------------TTDLFNQLRDTYPKGFWNELM---------   59 (256)
T ss_pred             CCcEEEEEecCceeecCCcchHHHHhcc----------------------cchhHHHHHHhcccchHHHHH---------
Confidence            4789999999999999999888877652                      112234444444433 33332         


Q ss_pred             cCCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 020024          108 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD  187 (332)
Q Consensus       108 ~~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~  187 (332)
                           ...++              ++.    =+|++.+++++.++.+++.||+.++++.+++.|.  .++.|||+.. ..
T Consensus        60 -----~rv~k--------------~Lh----eqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g~--~eliIVSDaN-sf  113 (256)
T KOG3120|consen   60 -----DRVFK--------------ELH----EQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGC--FELIIVSDAN-SF  113 (256)
T ss_pred             -----HHHHH--------------HHH----HcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCCC--ceEEEEecCc-hh
Confidence                 11221              222    2589999999999999999999999999999882  5999999985 89


Q ss_pred             HHHHHHHhcCCCc--ceEEeeeeEEcC-ceec--ccc---c-ccCCCCcchHHHHHHHHHHh---CCCCCceEEEEeCCc
Q 020024          188 LIRASFSSAGLNA--LNVHANEFSFKE-SIST--GEI---I-EKVESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSV  255 (332)
Q Consensus       188 ~I~~~l~~~g~~~--~~I~aN~l~~~~-g~~t--G~~---~-~~~~~~~~K~~~l~~~~~~~---~~~~~~~viyiGDs~  255 (332)
                      ||+.+|+.+|+..  ..|++|...++. |.+.  +.-   . ..+...+||..+|.++....   +. .++++||+|||.
T Consensus       114 FIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv-~yer~iYvGDG~  192 (256)
T KOG3120|consen  114 FIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGV-RYERLIYVGDGA  192 (256)
T ss_pred             HHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCC-ceeeEEEEcCCC
Confidence            9999999998743  379999999975 5432  211   1 23667789999999887543   22 356999999999


Q ss_pred             cchHHhhh
Q 020024          256 GDLLCLLE  263 (332)
Q Consensus       256 ~Dl~~l~~  263 (332)
                      ||+|+...
T Consensus       193 nD~CP~l~  200 (256)
T KOG3120|consen  193 NDFCPVLR  200 (256)
T ss_pred             CCcCcchh
Confidence            99998665

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.73  E-value=2e-16  Score=140.33  Aligned_cols=120  Identities=23%  Similarity=0.286  Sum_probs=97.6

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC-ceecccc
Q 020024          141 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGEI  219 (332)
Q Consensus       141 G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG~~  219 (332)
                      |++.+++....+.+.++||+.++++.++++    ++++|+|++. ..+++..++++|++  ++++|.+.+++ +..+|.-
T Consensus        54 ~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~  126 (205)
T PRK13582         54 GLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYD  126 (205)
T ss_pred             CCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCCc--hhhcceEEECCCCeEECcc
Confidence            689999999999999999999999999864    6899999997 89999999998874  57889988864 5566532


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                         ...+.+|...++++...     +.+++|||||.+|++++..|++|++++++..
T Consensus       127 ---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~  174 (205)
T PRK13582        127 ---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPAN  174 (205)
T ss_pred             ---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH
Confidence               22345788888765432     3589999999999999999999998876643

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.72  E-value=5.3e-17  Score=141.97  Aligned_cols=100  Identities=25%  Similarity=0.326  Sum_probs=78.5

Q ss_pred             CCChhHH----HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC--ceecccccccCCCCcc
Q 020024          155 SLQDGCT----TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE--SISTGEIIEKVESPID  228 (332)
Q Consensus       155 ~lrpg~~----e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~--g~~tG~~~~~~~~~~~  228 (332)
                      .++||+.    +++++++++|   ++++|||+|. ..+++++++.+|++..+++||++ +++  +..+|++.+..+.  +
T Consensus        85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~~-~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~~--~  157 (192)
T PF12710_consen   85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGSP-DEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNCG--G  157 (192)
T ss_dssp             HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEEE-HHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEES--H
T ss_pred             ccCcCchhhHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCCC--c
Confidence            3455555    9999999998   9999999997 99999999999998778999999 754  3566666544322  7


Q ss_pred             hHHHHHHHH--HHhCCCCCceEEEEeCCccchHHhh
Q 020024          229 KVQAFNNTL--EKYGTDRKNLSVYIGDSVGDLLCLL  262 (332)
Q Consensus       229 K~~~l~~~~--~~~~~~~~~~viyiGDs~~Dl~~l~  262 (332)
                      |..+++++.  ...+. ....++|||||.||++||+
T Consensus       158 K~~~l~~~~~~~~~~~-~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  158 KAEALKELYIRDEEDI-DPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHHHHHHTH-TCCEEEEEESSGGGHHHHH
T ss_pred             HHHHHHHHHHHhhcCC-CCCeEEEEECCHHHHHHhC
Confidence            999999982  11111 2478999999999999985

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=99.62  E-value=2.7e-14  Score=142.56  Aligned_cols=122  Identities=14%  Similarity=0.108  Sum_probs=95.9

Q ss_pred             hhcCCCCHHHHHHHhh----c---CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCcceEEeeee
Q 020024          137 GVLKGINLEDIKKAGE----R---LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHANEF  208 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~----~---i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~~~I~aN~l  208 (332)
                      ..|+|++.+++.+.++    +   -.+++.+.+.+   +++|   . .+|||++. ..+++++++. +|+  .+|+|+++
T Consensus        85 ~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~---~~~g---~-~vvVSASp-~~~Vepfa~~~LGi--d~VIgTeL  154 (497)
T PLN02177         85 IAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVF---NSFG---K-RYIITASP-RIMVEPFVKTFLGA--DKVLGTEL  154 (497)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHH---HhCC---C-EEEEECCc-HHHHHHHHHHcCCC--CEEEeccc
Confidence            4589999999977763    2   24777765544   4556   3 49999986 7788888865 676  57999999


Q ss_pred             EE-cCceeccccccc-CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          209 SF-KESISTGEIIEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       209 ~~-~~g~~tG~~~~~-~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++ .+|.+||.+.++ +|.|.+|.+++++...   .+  ...++||||.+|++||..|+.+++++++
T Consensus       155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g---~~--~~~~aYgDS~sD~plL~~a~e~y~V~~~  216 (497)
T PLN02177        155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG---DA--LPDLGLGDRETDHDFMSICKEGYMVPRT  216 (497)
T ss_pred             EECcCCEEeeeecCCCCCccHHHHHHHHHHhC---CC--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence            99 589999999987 6899999999985442   21  1238999999999999999999999874

>PRK08238 hypothetical protein; Validated

Probab=99.54  E-value=1e-13  Score=138.06  Aligned_cols=117  Identities=19%  Similarity=0.183  Sum_probs=95.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ..+++||+.+++++++++|   .+++|+|++. ..+++.+++.+|+ ...++|.+..            .++.+..|...
T Consensus        70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas~-~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~  132 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAG---RKLVLATASD-ERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA  132 (479)
T ss_pred             hCCCChhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence            3579999999999999999   9999999986 8889999888875 2456665311            13445568877


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCeeeecCc
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP  292 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~  292 (332)
                      +.++..+      ..++|+|||.+|+++++.|+.++++++++.|++.++++||+..-|..
T Consensus       133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~~  186 (479)
T PRK08238        133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFPP  186 (479)
T ss_pred             HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecCC
Confidence            7765532      34789999999999999999999999999999999999999987754

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.29  E-value=3.1e-10  Score=101.78  Aligned_cols=102  Identities=14%  Similarity=0.174  Sum_probs=72.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++|   ++++|+|++. ...++..++.+|+...  + ..      .+++.   ......-|...
T Consensus        91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~--f-~~------~~~~~---~~~~~kp~~~~  154 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADY--F-SV------VIGGD---SLPNKKPDPAP  154 (226)
T ss_pred             cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccC--c-cE------EEcCC---CCCCCCcChHH
Confidence            4779999999999999988   9999999997 7889999988876321  1 10      11110   01111123456


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      ++.++...+.. ..++++||||.+|+.++..+|+ .|.+.
T Consensus       155 ~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~  193 (226)
T PRK13222        155 LLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVT  193 (226)
T ss_pred             HHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEEC
Confidence            67777776663 4789999999999999999998 44443

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.28  E-value=1.1e-10  Score=107.90  Aligned_cols=97  Identities=19%  Similarity=0.225  Sum_probs=71.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++|+.++++|   ++++|+|.+ +...++..++.+|+..  ..|++.+     ....+         --+.
T Consensus       107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~-----d~~~~---------KP~P  168 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHE---IPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAE-----DVYRG---------KPDP  168 (260)
T ss_pred             CcccCCCHHHHHHHHHHCC---CEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecc-----cCCCC---------CCCH
Confidence            4678999999999999999   999999988 4889999999888632  1233211     11011         1134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ..+...+.+.+.. ..+++|||||.+|+.++..|++.+
T Consensus       169 e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~  205 (260)
T PLN03243        169 EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKC  205 (260)
T ss_pred             HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEE
Confidence            5556666666653 478999999999999999999843

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.26  E-value=1.7e-10  Score=103.71  Aligned_cols=105  Identities=14%  Similarity=0.116  Sum_probs=75.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++++.++++|   ++++|+|++- ...++..++.+|+..  .+...+ ..+...         .+..+..
T Consensus        89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~--~f~~~~-~~~~~~---------~~Kp~~~  152 (222)
T PRK10826         89 ETRPLLPGVREALALCKAQG---LKIGLASASP-LHMLEAVLTMFDLRD--YFDALA-SAEKLP---------YSKPHPE  152 (222)
T ss_pred             cCCCCCCCHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHhCcchh--cccEEE-EcccCC---------CCCCCHH
Confidence            35789999999999999999   9999999984 888999998877632  222111 011111         1112445


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .++.++...+.. ..++++||||.+|+.++..||+..+..+.
T Consensus       153 ~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v~~  193 (222)
T PRK10826        153 VYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVVPA  193 (222)
T ss_pred             HHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEecC
Confidence            677777777763 47899999999999999999986554433

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.23  E-value=3.5e-10  Score=100.59  Aligned_cols=98  Identities=16%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.++++|   +++.|+|++. ...++..++.+|+..  ..+++.     +     .    ...+-.+.
T Consensus        83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~~~~~-----~-----~----~~~~Kp~p  144 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKG---LRLGLVTNKP-TPLARPLLELLGLAKYFSVLIGG-----D-----S----LAQRKPHP  144 (213)
T ss_pred             cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCcHhhCcEEEec-----C-----C----CCCCCCCh
Confidence            4689999999999999998   9999999984 789999999887632  112221     0     0    01111245


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+.+.+.. ..+++|||||.+|+.++..|++.++
T Consensus       145 ~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i  182 (213)
T TIGR01449       145 DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV  182 (213)
T ss_pred             HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence            6677777777763 4789999999999999999998544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.21  E-value=5.4e-10  Score=99.84  Aligned_cols=98  Identities=15%  Similarity=0.175  Sum_probs=72.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.+++++++++|   +++.|+|.+. ...+...++.+|+..  ..|++-+     .         ...+..|.
T Consensus        80 ~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----~---------~~~~Kp~p  141 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLD-----D---------VEHAKPDP  141 (214)
T ss_pred             hcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecC-----c---------CCCCCCCc
Confidence            4679999999999999998   9999999986 889999999888742  1222211     0         00111245


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+.+.+.+.+.. ..+++|||||.+|+.+++.||+.++
T Consensus       142 ~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i  179 (214)
T PRK13288        142 EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTKTA  179 (214)
T ss_pred             HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEE
Confidence            6666677666653 4789999999999999999998433

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.20  E-value=1.1e-10  Score=94.82  Aligned_cols=110  Identities=14%  Similarity=0.065  Sum_probs=75.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEeeeeEEcC-ceecccc-cccCCCCc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHANEFSFKE-SISTGEI-IEKVESPI  227 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN~l~~~~-g~~tG~~-~~~~~~~~  227 (332)
                      ....++|++.++++.++++|   .+++|+|+++ ...++.+++.+|+.  ...+++....... +...+.. ...+..+.
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (139)
T cd01427          21 EELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGK   96 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCC
Confidence            34678999999999999998   9999999997 89999999887762  2234443322211 0001111 11233444


Q ss_pred             chHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          228 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       228 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      .|...++.+....+.. ...+++||||.+|+.+++.++.
T Consensus        97 ~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~  134 (139)
T cd01427          97 PNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGG  134 (139)
T ss_pred             CCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence            5666666666665542 4789999999999999999664

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.20  E-value=2.3e-09  Score=94.50  Aligned_cols=105  Identities=15%  Similarity=0.151  Sum_probs=75.0

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCC
Q 020024          149 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESP  226 (332)
Q Consensus       149 ~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~  226 (332)
                      +....+.+.||+.++++.++++|   ++++|+|.+. ...+...++.+|+..  ..|++.+     .  .|..  +    
T Consensus        86 ~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~-----~--~~~~--K----  148 (198)
T TIGR01428        86 EAYLRLPPHPDVPAGLRALKERG---YRLAILSNGS-PAMLKSLVKHAGLDDPFDAVLSAD-----A--VRAY--K----  148 (198)
T ss_pred             HHHhcCCCCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHCCChhhhheeEehh-----h--cCCC--C----
Confidence            33446889999999999999999   9999999885 889999998888631  1233321     1  1110  1    


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                       -+...++..+...+.. ..++++|||+.+|+.++..+|+. |.+.+
T Consensus       149 -P~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~r  193 (198)
T TIGR01428       149 -PAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNR  193 (198)
T ss_pred             -CCHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEecC
Confidence             1345566666666653 47899999999999999999984 44443

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.19  E-value=3.4e-10  Score=101.46  Aligned_cols=98  Identities=15%  Similarity=0.128  Sum_probs=73.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--c--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--A--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ...+.||+.+++++++++|   +++.|+|.+. ...+...|+.+|+.  .  ..++|.     +....+         --
T Consensus        85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~~~f~~i~~~-----~~~~~~---------KP  146 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSG---IKVALTTGFD-RDTAERLLEKLGWTVGDDVDAVVCP-----SDVAAG---------RP  146 (220)
T ss_pred             CCccCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHHhhhhhhccCCEEEcC-----CcCCCC---------CC
Confidence            3689999999999999999   9999999885 88999999887763  1  122221     111111         11


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      +...+...+.+.+.....+++||||+.+|+.+++.||+.+
T Consensus       147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence            4566777777766532468999999999999999999975

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.13  E-value=1.2e-09  Score=105.67  Aligned_cols=98  Identities=14%  Similarity=0.166  Sum_probs=72.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++|+.|+++|   +++.|+|.+- ...++..++.+|+..  ..|++-     +....+         --+.
T Consensus       214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~~-~~~~~~~L~~lgL~~yFd~Iv~s-----ddv~~~---------KP~P  275 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYK---IPMALVSTRP-RKTLENAIGSIGIRGFFSVIVAA-----EDVYRG---------KPDP  275 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCHHHceEEEec-----CcCCCC---------CCCH
Confidence            4678999999999999999   9999999985 889999999888632  123331     111011         1134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+...+.. ..+++|||||.+|+.++..|++.++
T Consensus       276 eifl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~I  313 (381)
T PLN02575        276 EMFIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCV  313 (381)
T ss_pred             HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEE
Confidence            5555566666653 4789999999999999999998433

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.11  E-value=6.6e-09  Score=94.15  Aligned_cols=98  Identities=18%  Similarity=0.194  Sum_probs=70.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.|+++|   +.+.|+|.+ +..++...++.+|+...  .+++.     +.  .+.       +--+.
T Consensus        93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~-----~~--~~~-------~KP~p  154 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAG---CVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGG-----DT--LAE-------RKPHP  154 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCchhcccEEEec-----Cc--CCC-------CCCCH
Confidence            4789999999999999998   999999987 47888888888776321  11111     10  111       11134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+.+.+.. ..++++||||.+|+.+++.||+..+
T Consensus       155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i  192 (229)
T PRK13226        155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSV  192 (229)
T ss_pred             HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEE
Confidence            5566666666663 4789999999999999999998533

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.11  E-value=2.5e-09  Score=98.13  Aligned_cols=98  Identities=13%  Similarity=0.057  Sum_probs=69.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc---eEEeeeeEEcCceecccccccCCCCcc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL---NVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~---~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      +...+.||+.++|+.|+++|   +++.|+|++. ...++.+++.+|+...   .|++.     +....+         --
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~~-~~~~~~~l~~~gl~~~f~d~ii~~-----~~~~~~---------KP  157 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGYT-REMMDVVAPEAALQGYRPDYNVTT-----DDVPAG---------RP  157 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCC---CeEEEECCCc-HHHHHHHHHHHHhcCCCCceEEcc-----ccCCCC---------CC
Confidence            35789999999999999999   9999999884 8899999988775321   12221     111001         11


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      +...+...+.+.+.....+++|||||.+|+.++..|++.
T Consensus       158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~  196 (253)
T TIGR01422       158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW  196 (253)
T ss_pred             CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence            334555556666642246899999999999999999984

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.11  E-value=2.4e-09  Score=99.71  Aligned_cols=96  Identities=20%  Similarity=0.291  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.+.||+.++|+.|+++|   +++.|+|.+. ..++...++.+|+...  +. .      +.++...      ..|..
T Consensus       139 ~~~~l~pg~~e~L~~L~~~g---i~laIvSn~~-~~~~~~~L~~~gl~~~--F~-~------vi~~~~~------~~k~~  199 (273)
T PRK13225        139 PALQLFPGVADLLAQLRSRS---LCLGILSSNS-RQNIEAFLQRQGLRSL--FS-V------VQAGTPI------LSKRR  199 (273)
T ss_pred             ccCCcCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhh--eE-E------EEecCCC------CCCHH
Confidence            35788999999999999999   9999999985 8999999998886321  11 0      1111111      12556


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      .+..++.+.+.. ..+++|||||.+|+.++..|++-
T Consensus       200 ~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~  234 (273)
T PRK13225        200 ALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLI  234 (273)
T ss_pred             HHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCe
Confidence            677777766653 46899999999999999999984

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.10  E-value=3.5e-09  Score=94.80  Aligned_cols=101  Identities=14%  Similarity=0.185  Sum_probs=71.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.++||+.++++.|+++|   +++.|+|.+. ...+...++.+|+..  ..|++..     .  .|.       .--+.
T Consensus        92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~-----~--~~~-------~KP~~  153 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSE-----E--EGV-------EKPHP  153 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEec-----c--CCC-------CCCCH
Confidence            4789999999999999998   9999999985 778888888877632  1222211     0  111       11133


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCee-EEEcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ..++..+.+.+.. ..++++||||. +|+.+++.||+. |.+..
T Consensus       154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~~  196 (221)
T TIGR02253       154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWINQ  196 (221)
T ss_pred             HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence            5566666666653 46899999998 999999999984 44443

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.10  E-value=2.2e-09  Score=95.25  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=73.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ..+.+.||+.+++++++++|   ++++|+|.+. ...+...++.+|+..  ..+++.     +     ..    ..+.-|
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~~l~~~f~~i~~~-----~-----~~----~~~KP~  133 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADG---VGTAIATGKS-GPRARSLLEALGLLPLFDHVIGS-----D-----EV----PRPKPA  133 (205)
T ss_pred             cccccCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHcCChhheeeEEec-----C-----cC----CCCCCC
Confidence            45889999999999999999   9999999984 788888888887632  122221     1     00    011124


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ...+.+.+++.+.. ..+++|||||.+|+.++..+|+.++
T Consensus       134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i  172 (205)
T TIGR01454       134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV  172 (205)
T ss_pred             hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence            56777777777653 4789999999999999999998543

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.09  E-value=6.2e-09  Score=96.46  Aligned_cols=97  Identities=9%  Similarity=-0.009  Sum_probs=69.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc---ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~---~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      .+.+.||+.++|+.|+++|   +++.|+|++. ...+..+++.+++..   ..|++.     +..  +       .+--+
T Consensus        99 ~~~~~pg~~elL~~L~~~g---~~l~I~T~~~-~~~~~~~l~~~~l~~~~~d~i~~~-----~~~--~-------~~KP~  160 (267)
T PRK13478         99 YATPIPGVLEVIAALRARG---IKIGSTTGYT-REMMDVVVPLAAAQGYRPDHVVTT-----DDV--P-------AGRPY  160 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHhhcCCCceEEEcC-----CcC--C-------CCCCC
Confidence            5789999999999999999   9999999885 788888887665421   112221     110  0       01113


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      ...+...+.+.+.....+++|||||.+|+.++..|++.
T Consensus       161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~  198 (267)
T PRK13478        161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW  198 (267)
T ss_pred             hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence            45566666666653236899999999999999999983

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.08  E-value=5.1e-09  Score=97.50  Aligned_cols=98  Identities=12%  Similarity=0.141  Sum_probs=70.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...++||+.++|+.++++|   ++++|+|.+- ...++..++.+++..   +.+.+      +++.-   .....-+...
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~~-~~~~~~~l~~~~i~~---~f~~i------~~~d~---~~~~Kp~p~~  162 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQG---VEMALITNKP-ERFVAPLLDQMKIGR---YFRWI------IGGDT---LPQKKPDPAA  162 (272)
T ss_pred             CCccCCCHHHHHHHHHHCC---CeEEEEECCc-HHHHHHHHHHcCcHh---hCeEE------EecCC---CCCCCCCcHH
Confidence            3678999999999999998   9999999874 788888888877632   11111      11110   0111124456


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      ++.++...+.. ..++++|||+.+|+.++..+++.
T Consensus       163 ~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~  196 (272)
T PRK13223        163 LLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQ  196 (272)
T ss_pred             HHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCe
Confidence            67777776653 47899999999999999999973

>PRK11587 putative phosphatase; Provisional

Probab=99.07  E-value=7.7e-09  Score=92.82  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=68.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..+.++||+.++|+.|+++|   +++.|+|.+. ...+...++..++... .+++.+     ....++         -+.
T Consensus        80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~~-~~~~~~~l~~~~l~~~~~i~~~~-----~~~~~K---------P~p  141 (218)
T PRK11587         80 EGITALPGAIALLNHLNKLG---IPWAIVTSGS-VPVASARHKAAGLPAPEVFVTAE-----RVKRGK---------PEP  141 (218)
T ss_pred             cCceeCcCHHHHHHHHHHcC---CcEEEEcCCC-chHHHHHHHhcCCCCccEEEEHH-----HhcCCC---------CCc
Confidence            35789999999999999999   9999999884 5666777776665311 222211     000001         123


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..+...+...+.. ..+++|||||.+|+.++..|++. |.+.
T Consensus       142 ~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~  182 (218)
T PRK11587        142 DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN  182 (218)
T ss_pred             HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence            4444455555653 47899999999999999999984 4444

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.07  E-value=6.6e-09  Score=95.33  Aligned_cols=98  Identities=14%  Similarity=0.130  Sum_probs=71.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.++|++|+++|   +++.|+|.+. ...++..++.+|+..  ..|++.+     ....++         -+.
T Consensus       106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~iv~~~-----~~~~~K---------P~p  167 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNAP-RENAELMISLLGLSDFFQAVIIGS-----ECEHAK---------PHP  167 (248)
T ss_pred             cCCcCccHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCChhhCcEEEecC-----cCCCCC---------CCh
Confidence            5789999999999999999   9999999985 899999999888642  1233321     111111         123


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+.+.+.. ..+++|||||.+|+.+++.|++.++
T Consensus       168 ~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i  205 (248)
T PLN02770        168 DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVV  205 (248)
T ss_pred             HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence            4455556666653 4789999999999999999998543

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.02  E-value=9.4e-09  Score=92.97  Aligned_cols=98  Identities=17%  Similarity=0.221  Sum_probs=72.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ...+.+.||+.++++.++++|   ++++|+|.+ +...+...++.+|+..  ..|++..-       .|.  ++     -
T Consensus        89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~-------~~~--~K-----P  150 (224)
T PRK14988         89 GPRAVLREDTVPFLEALKASG---KRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHT-------FGY--PK-----E  150 (224)
T ss_pred             hccCCcCCCHHHHHHHHHhCC---CeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeee-------CCC--CC-----C
Confidence            356889999999999999999   999999988 4888888888877632  23333220       010  01     1


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      +...+...+++.+.. ..+++|||||.+|+.++..||+.
T Consensus       151 ~p~~~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~  188 (224)
T PRK14988        151 DQRLWQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIR  188 (224)
T ss_pred             CHHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCe
Confidence            345566666666653 47899999999999999999985

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.02  E-value=1e-08  Score=89.05  Aligned_cols=96  Identities=17%  Similarity=0.153  Sum_probs=66.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.++++.++++|   ++++|+|.+   ..++..++.+|+..  ..+++..     .  .+.       ...+.
T Consensus        86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~-----~--~~~-------~kp~~  145 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDAD-----E--VKE-------GKPHP  145 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeehh-----h--CCC-------CCCCh
Confidence            4789999999999999998   999999975   56788888877632  1222211     0  000       11123


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+++.+.. .++++|||||.+|+.++..+++..+
T Consensus       146 ~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~i  183 (185)
T TIGR02009       146 ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFAV  183 (185)
T ss_pred             HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeEe
Confidence            4455556565653 4789999999999999999997543

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK09449 dUMP phosphatase; Provisional

Probab=99.02  E-value=2.1e-08  Score=90.00  Aligned_cols=100  Identities=17%  Similarity=0.309  Sum_probs=70.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.|+ +|   +++.|+|.+. ...++..++.+|+..  ..|++.+     .  .|.       .--+.
T Consensus        93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~-----~--~~~-------~KP~p  153 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDYFDLLVISE-----Q--VGV-------AKPDV  153 (224)
T ss_pred             cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEEC-----c--cCC-------CCCCH
Confidence            4779999999999999 57   8999999986 788888888887632  1222211     0  110       11134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..+...+.+.+.....+++|||||. +|+.+++.||+. |.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence            5666667766643336899999998 799999999984 4443

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.01  E-value=1.4e-09  Score=96.23  Aligned_cols=89  Identities=20%  Similarity=0.193  Sum_probs=68.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch--H
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K--~  230 (332)
                      ..++||++.++|+.|++.|   +++.|+|+.. ......+++.+|+....++++..               ..+..|  .
T Consensus       125 ~d~~~~~~~~~l~~L~~~G---i~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~  185 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAG---IKVAILTGDN-ESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFL  185 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTT---EEEEEEESSE-HHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHH
T ss_pred             cCcchhhhhhhhhhhhccC---cceeeeeccc-ccccccccccccccccccccccc---------------ccccchhHH
Confidence            3589999999999999999   9999999874 78888888888884434555332               233457  5


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      ++++++    +. ...++++||||.||++|++.||
T Consensus       186 ~~i~~l----~~-~~~~v~~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  186 RIIKEL----QV-KPGEVAMVGDGVNDAPALKAAG  215 (215)
T ss_dssp             HHHHHH----TC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred             HHHHHH----hc-CCCEEEEEccCHHHHHHHHhCc
Confidence            555543    32 1358999999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.01  E-value=5.8e-09  Score=90.58  Aligned_cols=95  Identities=14%  Similarity=0.122  Sum_probs=64.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.||+.++|+.|+++|   +++.|+|.+..   ....++.+|+..  ..+++.     +.  .+.       ..-+..
T Consensus        86 ~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~-----~~--~~~-------~kp~p~  145 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDYFDAIVDP-----AE--IKK-------GKPDPE  145 (185)
T ss_pred             cccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhhCcEEEeh-----hh--cCC-------CCCChH
Confidence            578999999999999998   99999997642   345677777531  112111     00  010       111445


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      .++..+.+.+.. ..++++|||+.+|+.++..+++..+
T Consensus       146 ~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~~i  182 (185)
T TIGR01990       146 IFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMFAV  182 (185)
T ss_pred             HHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCEEE
Confidence            666666666653 4789999999999999999997543

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.00  E-value=7.5e-09  Score=93.27  Aligned_cols=94  Identities=17%  Similarity=0.200  Sum_probs=70.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.||..+.+.+++++|   +++.|+|..- ...++.+|+.+|+...  .+++    .+ +.    ...+     -...
T Consensus        88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k~-~~~~~~~l~~~gl~~~F~~i~g----~~-~~----~~~K-----P~P~  149 (220)
T COG0546          88 SRLFPGVKELLAALKSAG---YKLGIVTNKP-ERELDILLKALGLADYFDVIVG----GD-DV----PPPK-----PDPE  149 (220)
T ss_pred             CccCCCHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHhCCccccceEEc----CC-CC----CCCC-----cCHH
Confidence            579999999999999999   9999999884 8999999999887421  2222    00 00    0011     1335


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      .+...+...+.+ ..+++|||||.+|+.|.+.|++
T Consensus       150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~  183 (220)
T COG0546         150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV  183 (220)
T ss_pred             HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence            566667777764 4589999999999999999995

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.00  E-value=3.6e-08  Score=87.21  Aligned_cols=94  Identities=18%  Similarity=0.186  Sum_probs=64.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.||+.++++.++++|   ++++|+|.+- . .+...++.+|+..  ..|++..     .  .|.       .--+..
T Consensus       104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~~-~-~~~~~l~~~~l~~~fd~i~~s~-----~--~~~-------~KP~~~  164 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERG---LILGVISNFD-S-RLRGLLEALGLLEYFDFVVTSY-----E--VGA-------EKPDPK  164 (203)
T ss_pred             ceeCcCHHHHHHHHHHCC---CEEEEEeCCc-h-hHHHHHHHCCcHHhcceEEeec-----c--cCC-------CCCCHH
Confidence            468999999999999998   9999999753 4 4577787777531  1222211     0  111       001234


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCee
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG  267 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g  267 (332)
                      .+...+...+.. ..++++||||. +|+.++..+|+.
T Consensus       165 ~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~  200 (203)
T TIGR02252       165 IFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGWR  200 (203)
T ss_pred             HHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence            556666666653 47899999997 899999999864

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.98  E-value=4.7e-08  Score=86.49  Aligned_cols=121  Identities=12%  Similarity=0.123  Sum_probs=76.7

Q ss_pred             CHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-CCCc--ceEEeeeeEEcCceecc
Q 020024          143 NLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLNA--LNVHANEFSFKESISTG  217 (332)
Q Consensus       143 ~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~~~--~~I~aN~l~~~~g~~tG  217 (332)
                      +.+++.+...  ...++||+.++++.++++|   ++++|+|.+. ...+...+... ++..  ..|++..     .  .|
T Consensus        70 ~~~~~~~~~~~~~~~~~~g~~e~L~~l~~~g---~~~~i~Sn~~-~~~~~~~~~~~~~l~~~fd~v~~s~-----~--~~  138 (199)
T PRK09456         70 SYEQFAHGWQAVFVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEVRAAADHIYLSQ-----D--LG  138 (199)
T ss_pred             CHHHHHHHHHHHHhccCHHHHHHHHHHHhCC---CcEEEEcCCc-hhhHHHHHhhchhHHHhcCEEEEec-----c--cC
Confidence            3444443332  2468999999999999999   9999999874 55555444332 2210  1222211     0  11


Q ss_pred             cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCChhHHHHhHh
Q 020024          218 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       218 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~~~L~~~~~~  282 (332)
                      .       .--+....+..+.+.+.. ..+++||||+..|+.+++.+|+ .|.+.+...+.++.+.
T Consensus       139 ~-------~KP~p~~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~  196 (199)
T PRK09456        139 M-------RKPEARIYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFAK  196 (199)
T ss_pred             C-------CCCCHHHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHh
Confidence            0       111445666666666653 4789999999999999999998 5566666666665543

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.97  E-value=4e-08  Score=83.41  Aligned_cols=98  Identities=20%  Similarity=0.308  Sum_probs=74.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++++.++++|   ++++|+|.+ +...+...++.+|+.  ...+++..          .    ......+
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~----------~----~~~~Kp~  135 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKG---IPLVIVSNG-SRERIERVLERLGLDDYFDEIISSD----------D----VGSRKPD  135 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTT---SEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGG----------G----SSSSTTS
T ss_pred             hccchhhhhhhhhhhccccc---ceeEEeecC-Ccccccccccccccccccccccccc----------h----hhhhhhH
Confidence            46899999999999999888   999999988 589999999988764  12333311          0    0111124


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ...++..+.+.+.. ..++++|||+..|+.++..+|+..
T Consensus       136 ~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~  173 (176)
T PF13419_consen  136 PDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT  173 (176)
T ss_dssp             HHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred             HHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence            46677777777764 489999999999999999999743

...

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.89  E-value=3.8e-08  Score=83.06  Aligned_cols=91  Identities=12%  Similarity=0.145  Sum_probs=64.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .....||+.++++.++++|   ++++|+|.+. ...+...++.+ +..  ..|++     .+..         . +.-+.
T Consensus        62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~-l~~~f~~i~~-----~~~~---------~-~Kp~~  121 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKH-LGDYFDLILG-----SDEF---------G-AKPEP  121 (154)
T ss_pred             hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHH-HHhcCcEEEe-----cCCC---------C-CCcCH
Confidence            4556799999999999988   9999999996 77888877764 311  12222     1111         0 11245


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      ..+...+.+.+.. . +++||||+.+|+.+++.|+
T Consensus       122 ~~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       122 EIFLAALESLGLP-P-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             HHHHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence            6677777777764 4 8999999999999998875

HAD subfamilies caused by an overly broad single model.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=98.88  E-value=2e-07  Score=87.41  Aligned_cols=103  Identities=18%  Similarity=0.184  Sum_probs=69.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      +.+.||+.++|+.++++|   ++++|+|.+. ...+..+++..+...   +.+.+.+    +++.-   ....-.+...+
T Consensus       143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~~-~~~~~~~l~~~~~~~---~~~~~~~----v~~~~---~~~~KP~p~~~  208 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAG---IKVAVCSTSN-EKAVSKIVNTLLGPE---RAQGLDV----FAGDD---VPKKKPDPDIY  208 (286)
T ss_pred             CCchhhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhcccc---ccCceEE----Eeccc---cCCCCCCHHHH
Confidence            689999999999999999   9999999874 888888877542110   1111111    01100   00111134566


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ...+...+.. ..++++||||.+|+.++..||+.++..
T Consensus       209 ~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v  245 (286)
T PLN02779        209 NLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVT  245 (286)
T ss_pred             HHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence            6666666653 478999999999999999999854443

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.88  E-value=3.8e-08  Score=98.29  Aligned_cols=95  Identities=18%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..+++||+.++|++++++|   +++.|+|.+- ..++...++.+|+..  ..+++-     +.. .+         ..|.
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~~-~~~~~~~l~~~~l~~~f~~i~~~-----d~v-~~---------~~kP  388 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENN---CSIYIASNGL-TEYLRAIVSYYDLDQWVTETFSI-----EQI-NS---------LNKS  388 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHCCcHhhcceeEec-----CCC-CC---------CCCc
Confidence            4689999999999999998   9999999984 899999999887632  122221     111 00         1233


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+.+.+   ..++++||||.+|+.++..|++.++
T Consensus       389 ~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~~I  424 (459)
T PRK06698        389 DLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLIAI  424 (459)
T ss_pred             HHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCeEE
Confidence            44555555443   2689999999999999999998443

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.87  E-value=1.2e-07  Score=84.75  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=69.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.++||+.+++++++++    ++++|+|.++ ...++..++.+|+..  ..|++..    +   .|       ..--+.
T Consensus        95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~----~---~~-------~~KP~~  155 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSE----D---AG-------IQKPDK  155 (224)
T ss_pred             cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcC----c---cC-------CCCCCH
Confidence            478999999999999964    7999999987 788888898887632  1222211    0   01       011134


Q ss_pred             HHHHHHHHHh-CCCCCceEEEEeCCc-cchHHhhhcCe-eEEEc
Q 020024          231 QAFNNTLEKY-GTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~-~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~  271 (332)
                      ..+...+.+. +.. ..+++|||||. +|+.+++.+|+ .|.+.
T Consensus       156 ~~~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~  198 (224)
T TIGR02254       156 EIFNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMN  198 (224)
T ss_pred             HHHHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEEC
Confidence            5566666666 543 46899999998 79999999998 34444

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN02940 riboflavin kinase

Probab=98.86  E-value=3.9e-08  Score=95.90  Aligned_cols=99  Identities=12%  Similarity=0.166  Sum_probs=71.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHH-hcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS-SAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~-~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      +.+.+.||+.++++.|+++|   +++.|+|.+. ...+...++ ..|+..  ..|+|.+     ..         ..+--
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~~-~~~~~~~l~~~~gl~~~Fd~ii~~d-----~v---------~~~KP  151 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHG---VPMALASNSP-RANIEAKISCHQGWKESFSVIVGGD-----EV---------EKGKP  151 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhccChHhhCCEEEehh-----hc---------CCCCC
Confidence            35789999999999999999   9999999985 788888776 556521  1233311     10         01111


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      +.+.+...+...+.. ..++++||||.+|+.++..||+.++
T Consensus       152 ~p~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I  191 (382)
T PLN02940        152 SPDIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVI  191 (382)
T ss_pred             CHHHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence            346666667666663 4789999999999999999998533

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.85  E-value=4.5e-08  Score=89.20  Aligned_cols=90  Identities=13%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcccc---CHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~---s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ....+++.+++++|+++|   ++++|||+..   ....++.+++.+|++..  +  ...+     ++.-...  ...+|.
T Consensus       113 s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f--~~i~-----~~d~~~~--~Kp~~~  178 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N--PVIF-----AGDKPGQ--YQYTKT  178 (237)
T ss_pred             CcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e--eEEE-----CCCCCCC--CCCCHH
Confidence            456667999999999999   9999999862   14578888888887531  1  1112     2211111  011243


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      .    ++.++     ..++|||||.+|+.+.+.|++
T Consensus       179 ~----~l~~~-----~i~i~vGDs~~DI~aAk~AGi  205 (237)
T TIGR01672       179 Q----WIQDK-----NIRIHYGDSDNDITAAKEAGA  205 (237)
T ss_pred             H----HHHhC-----CCeEEEeCCHHHHHHHHHCCC
Confidence            3    23332     247999999999999999998

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.85  E-value=1.7e-07  Score=81.72  Aligned_cols=99  Identities=12%  Similarity=0.193  Sum_probs=67.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.++++.++      .+++|+|.+. ...+...++.+|+..  ..|++.+-       .+.   ......-+.
T Consensus        82 ~~~~~~g~~~~L~~L~------~~~~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~~~~-------~~~---~~~~~KP~p  144 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP------GRKIIFTNGD-RAHARRALNRLGIEDCFDGIFCFDT-------ANP---DYLLPKPSP  144 (184)
T ss_pred             hCCCCHHHHHHHHhCC------CCEEEEeCCC-HHHHHHHHHHcCcHhhhCeEEEeec-------ccC---ccCCCCCCH
Confidence            4678999999999886      3789999985 889999999888632  12333210       010   000011134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+++.+.. ..++++|||+..|+.++..+|+..+
T Consensus       145 ~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~i  182 (184)
T TIGR01993       145 QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKTV  182 (184)
T ss_pred             HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEEe
Confidence            5666666666653 4789999999999999999997543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.83  E-value=2.7e-07  Score=79.63  Aligned_cols=95  Identities=15%  Similarity=0.154  Sum_probs=65.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      +.+.||+.++++.++++|   ++++|+|.+. ... ...+.+.|+..  ..|++.     +.  .|       .+.-+..
T Consensus        84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~-----~~--~~-------~~KP~~~  144 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFS-----GD--VG-------RGKPDPD  144 (183)
T ss_pred             CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEc-----CC--CC-------CCCCCHH
Confidence            689999999999999998   9999999986 555 55555466531  122221     00  00       0001245


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      .++..+...+.. ..++++|||+..|+.+++.+|+..
T Consensus       145 ~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~  180 (183)
T TIGR01509       145 IYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMHT  180 (183)
T ss_pred             HHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCEE
Confidence            556666666653 478999999999999999999743

HAD subfamilies caused by an overly broad single model.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=98.81  E-value=1.7e-07  Score=92.62  Aligned_cols=120  Identities=9%  Similarity=0.010  Sum_probs=89.6

Q ss_pred             HhhhcCCCCHHHHHHHhhcC-------CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCcceEEee
Q 020024          135 ESGVLKGINLEDIKKAGERL-------SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHAN  206 (332)
Q Consensus       135 ~~~~f~G~~~~~l~~~~~~i-------~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~~~I~aN  206 (332)
                      -.-.|+|++.+++++.++.+       -+++.   .++.++++|    .++|+|++. ..+++++++. +|+  ..|+++
T Consensus        69 i~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~LG~--D~VvGT  138 (498)
T PLN02499         69 IFVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEHLRA--DEVIGS  138 (498)
T ss_pred             HHHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHhcCC--ceEEee
Confidence            35789999999998877631       23333   556666554    899999987 8899999987 676  578899


Q ss_pred             eeEEcC-ceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          207 EFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       207 ~l~~~~-g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ++++.+ |.+||.+.+.+| +.-|.++++++...     ....+-+||+.+|-+.+..+. ++.+.
T Consensus       139 EL~v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck-~~~~~  197 (498)
T PLN02499        139 ELVVNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK-EQIHP  197 (498)
T ss_pred             eEEEeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc-eEEec
Confidence            999985 999999987655 44457788776531     135789999999999888876 44443

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.80  E-value=2.6e-08  Score=102.92  Aligned_cols=99  Identities=19%  Similarity=0.251  Sum_probs=81.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||++++.+++|++.|   ++++++|+.. ......+.++.|++  +++++                 +++.+|...+
T Consensus       445 D~~Rp~a~eaI~~l~~~G---i~v~miTGD~-~~ta~~iA~~lGI~--~v~a~-----------------~~PedK~~~v  501 (675)
T TIGR01497       445 DIVKGGIKERFAQLRKMG---IKTIMITGDN-RLTAAAIAAEAGVD--DFIAE-----------------ATPEDKIALI  501 (675)
T ss_pred             ccchhHHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCC--EEEcC-----------------CCHHHHHHHH
Confidence            389999999999999999   9999999874 78888888888873  34431                 3467899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVG  280 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~  280 (332)
                      +++..+     +..+.++|||.||.|+|..||+||+++++..+++-+
T Consensus       502 ~~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akea  543 (675)
T TIGR01497       502 RQEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEA  543 (675)
T ss_pred             HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHh
Confidence            998753     357899999999999999999999999765444443

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.78  E-value=2.9e-07  Score=81.18  Aligned_cols=91  Identities=10%  Similarity=0.101  Sum_probs=61.7

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHH
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN  235 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~  235 (332)
                      ..++..++|+.++++|   +++.|+|++. ...++..++.+|+..  .+..-+..++ .  +.        --+...+..
T Consensus       107 ~~~~~~~~L~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~--~f~~~~~~~~-~--~~--------KP~p~~~~~  169 (197)
T TIGR01548       107 TLLTPKGLLRELHRAP---KGMAVVTGRP-RKDAAKFLTTHGLEI--LFPVQIWMED-C--PP--------KPNPEPLIL  169 (197)
T ss_pred             cccCHHHHHHHHHHcC---CcEEEECCCC-HHHHHHHHHHcCchh--hCCEEEeecC-C--CC--------CcCHHHHHH
Confidence            4455699999999988   9999999985 889999999888632  1211110111 0  00        113445555


Q ss_pred             HHHHhCCCCCceEEEEeCCccchHHhhhc
Q 020024          236 TLEKYGTDRKNLSVYIGDSVGDLLCLLEA  264 (332)
Q Consensus       236 ~~~~~~~~~~~~viyiGDs~~Dl~~l~~A  264 (332)
                      .+...+.. ..++++|||+.+|+.++..|
T Consensus       170 ~~~~~~~~-~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       170 AAKALGVE-ACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             HHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence            56655653 46899999999999988754

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.78  E-value=1.8e-07  Score=82.96  Aligned_cols=188  Identities=20%  Similarity=0.299  Sum_probs=127.1

Q ss_pred             EEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHH---HhhcCCCCcccCC
Q 020024           34 IFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQC---IESFMPSEKVENF  110 (332)
Q Consensus        34 vi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~---~~~~~p~~~~~~~  110 (332)
                      +++|+.|-++-.|---.++...   -|.                 .+.-++.++  ..++|..+   ++.|.|-     .
T Consensus         3 fvtD~EGP~sl~D~A~E~~a~~---~pn-----------------grrfF~~~S--eyDD~la~E~rReGYeaG-----~   55 (315)
T COG4030           3 FVTDWEGPWSLTDFALELCAAV---FPN-----------------GRRFFSNLS--EYDDYLAYEVRREGYEAG-----Y   55 (315)
T ss_pred             ccccCCCCCccchhHHHHHHHH---cCC-----------------HHHHHHhhh--hhhhHHHHHHhccCCCCC-----c
Confidence            7899999999887643333221   111                 122333332  12333332   3344442     4


Q ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 020024          111 NYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI  189 (332)
Q Consensus       111 ~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~-i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I  189 (332)
                      +..=..+|+-                  -+|++.++++++.+. ..+-||+.+.++.+++.    ++-+|+|-++ ..++
T Consensus        56 TLkLivPFL~------------------ahGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~  112 (315)
T COG4030          56 TLKLIVPFLA------------------AHGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYL  112 (315)
T ss_pred             chhhHHHHHH------------------HhcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHH
Confidence            5556667753                  258999999999885 89999999999999875    7888999998 8899


Q ss_pred             HHHHHhcCCCcceEEeeeeEEcC-ce-----------------eccc------------cc----c------cCCCCcch
Q 020024          190 RASFSSAGLNALNVHANEFSFKE-SI-----------------STGE------------II----E------KVESPIDK  229 (332)
Q Consensus       190 ~~~l~~~g~~~~~I~aN~l~~~~-g~-----------------~tG~------------~~----~------~~~~~~~K  229 (332)
                      +......|++--+++|+++.+|+ .+                 ..|.            +.    +      +...|..|
T Consensus       113 ~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~k  192 (315)
T COG4030         113 RRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEK  192 (315)
T ss_pred             HHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcch
Confidence            99988888876789999988873 10                 1121            11    1      23445567


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC----eeEEEcCC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD----IGIVIGSS  273 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad----~gvv~~~~  273 (332)
                      .+.++.+..-.+.+  ..++++|||+||..|++.+.    ++|+++.+
T Consensus       193 a~i~e~~~ele~~d--~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN  238 (315)
T COG4030         193 AKIMEGYCELEGID--FSAVVVGDSITDVKMLEAARGRGGLAVAFNGN  238 (315)
T ss_pred             hHHHHHHHhhcCCC--cceeEecCcccchHHHHHhhccCceEEEecCC
Confidence            78888777655542  34799999999999999973    45777766

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.74  E-value=1.9e-07  Score=81.37  Aligned_cols=96  Identities=13%  Similarity=0.032  Sum_probs=67.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.|| .+++..+++ +   .+++|+|++. ...++..++.+|+..  ..|++-     +..  +       ..--+.
T Consensus        86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~-----~~~--~-------~~KP~p  145 (188)
T PRK10725         86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAA-----DDV--Q-------HHKPAP  145 (188)
T ss_pred             cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEeh-----hhc--c-------CCCCCh
Confidence            4567786 589999875 3   7999999986 889999999888632  122221     110  1       111244


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+.....+.+.. ..+++||||+.+|+.++..||+.++
T Consensus       146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i  183 (188)
T PRK10725        146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAV  183 (188)
T ss_pred             HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEE
Confidence            6677777776653 4789999999999999999998543

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.74  E-value=3.6e-07  Score=81.94  Aligned_cols=98  Identities=12%  Similarity=0.140  Sum_probs=68.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .+.+.||+.++++.+   +   ++++|+|.+- ...++..|+.+|+...  +      ++.++++.-.+   ..--+...
T Consensus        86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~~-~~~~~~~l~~~~l~~~--F------~~~v~~~~~~~---~~KP~p~~  147 (221)
T PRK10563         86 ELEPIAGANALLESI---T---VPMCVVSNGP-VSKMQHSLGKTGMLHY--F------PDKLFSGYDIQ---RWKPDPAL  147 (221)
T ss_pred             cCCcCCCHHHHHHHc---C---CCEEEEeCCc-HHHHHHHHHhcChHHh--C------cceEeeHHhcC---CCCCChHH
Confidence            478999999999988   3   8999999884 7889999988776321  1      01111111000   01114466


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      +...+.+.+.. ..++++||||.+|+.++..||+.++
T Consensus       148 ~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i  183 (221)
T PRK10563        148 MFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF  183 (221)
T ss_pred             HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence            66677777663 4789999999999999999998655

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.73  E-value=9.9e-08  Score=91.75  Aligned_cols=105  Identities=17%  Similarity=0.153  Sum_probs=69.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcc----ccCHHHHHH-----------HHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSY----CWCGDLIRA-----------SFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~----g~s~~~I~~-----------~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      ..++||+.++|+.|+++|   ++++|+|.    |+ ..+++.           .++.+|+..     +.+.     +...
T Consensus        29 ~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~i~~iL~~~gl~f-----d~i~-----i~~~   94 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNLMMQIFESQGIKF-----DEVL-----ICPH   94 (354)
T ss_pred             ceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHHHHHHHHHcCCce-----eeEE-----EeCC
Confidence            678999999999999988   99999998    33 344444           444444421     1111     1111


Q ss_pred             c-cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          219 I-IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       219 ~-~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                      . ...+.++..|...+..++...+.. ..+++||||+.+|+.+++.+++. |.+++.
T Consensus        95 ~~sd~~~~rKP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446         95 FPEDNCSCRKPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             cCcccCCCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence            1 112223445667777777665553 47899999999999999999994 445443

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.73  E-value=5.5e-08  Score=82.09  Aligned_cols=100  Identities=16%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHHhcCCCcceEEeeeeEEcCceeccccc
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGEII  220 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~  220 (332)
                      .++||+.++++.|+++|   +.++|+|.+-.              ...+...++.+|+.....+.      ........ 
T Consensus        27 ~~~~g~~~~l~~Lk~~g---~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~~~~-   96 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAG---YTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF------CPHHPADN-   96 (147)
T ss_pred             EEcCChHHHHHHHHHCC---CEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE------CCCCCCCC-
Confidence            57899999999999999   99999997521              14566677777763111111      11000000 


Q ss_pred             ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          221 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       221 ~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                        ....--|...++..+.+.+.+ ..+++||||+..|+.++..+++-
T Consensus        97 --~~~~KP~~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~  140 (147)
T TIGR01656        97 --CSCRKPKPGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLA  140 (147)
T ss_pred             --CCCCCCCHHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCC
Confidence              001123567777777777753 47899999999999999999984

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.70  E-value=9.6e-08  Score=98.96  Aligned_cols=96  Identities=20%  Similarity=0.234  Sum_probs=78.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++|||+++.++.|++.|   ++++++|+-- ..-...+.++.|++  +++|                 -+++++|.+.+
T Consensus       444 D~~R~~~~eai~~Lr~~G---I~vvMiTGDn-~~TA~aIA~elGId--~v~A-----------------~~~PedK~~iV  500 (679)
T PRK01122        444 DIVKPGIKERFAELRKMG---IKTVMITGDN-PLTAAAIAAEAGVD--DFLA-----------------EATPEDKLALI  500 (679)
T ss_pred             ccCchhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCc--EEEc-----------------cCCHHHHHHHH
Confidence            378999999999999999   9999999863 77778888888873  3333                 23567899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHH
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR  277 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~  277 (332)
                      +++.++     +..+.++|||.||-|+|..||+||+|+.+..++
T Consensus       501 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  539 (679)
T PRK01122        501 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA  539 (679)
T ss_pred             HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH
Confidence            988753     346889999999999999999999999664433

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.68  E-value=1.2e-07  Score=96.97  Aligned_cols=93  Identities=25%  Similarity=0.325  Sum_probs=77.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      .++|||+.+++++|+++|   ++++|+|+.. ...++.+++.+|++   ++++                 ..+.+|.+.+
T Consensus       404 d~l~~~a~e~i~~Lk~~G---i~v~ilSgd~-~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~v  459 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRG---IEPVMLTGDN-RKTAKAVAKELGIN---VRAE-----------------VLPDDKAALI  459 (562)
T ss_pred             ccccHHHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCc---EEcc-----------------CChHHHHHHH
Confidence            579999999999999999   9999999985 88999999998863   3331                 1235799888


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                      +++..+     +.+++|||||.||.+++..||+||.++.+..
T Consensus       460 ~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~  496 (562)
T TIGR01511       460 KELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTD  496 (562)
T ss_pred             HHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCH
Confidence            887652     3689999999999999999999999996543

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=98.68  E-value=3.8e-07  Score=81.14  Aligned_cols=107  Identities=11%  Similarity=0.097  Sum_probs=66.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH--HHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL--IRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~--I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      .+.+.||+.++++.|+++|   ++++|+|.++ ...  ....+...++..  ..|++..       ..|. ..+      
T Consensus        92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~-~~~~~~~~~~~~~~l~~~fd~v~~s~-------~~~~-~KP------  153 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKG---FKTACITNNF-PTDHSAEEALLPGDIMALFDAVVESC-------LEGL-RKP------  153 (211)
T ss_pred             ccccChhHHHHHHHHHHCC---CeEEEEeCCC-CccchhhhHhhhhhhHhhCCEEEEee-------ecCC-CCC------
Confidence            5789999999999999998   9999999875 222  111122222210  1222211       0010 001      


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCChhHHH
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRR  278 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~~~L~~  278 (332)
                      ....+...+.+.+.. ..+++||||+..|+.+++.+|+ .|.+.+...+..
T Consensus       154 ~p~~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~  203 (211)
T TIGR02247       154 DPRIYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITTIKVSDEEQAIH  203 (211)
T ss_pred             CHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence            134555556666653 4789999999999999999998 455555544433

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.68  E-value=3.1e-07  Score=82.17  Aligned_cols=56  Identities=18%  Similarity=0.260  Sum_probs=46.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+.+|...++.+++.++.+ ..+++++|||.||++|++.|++|++|++. +.+++.|
T Consensus       143 ~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A  199 (215)
T TIGR01487       143 KKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA  199 (215)
T ss_pred             cCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence            45678999999999888764 36899999999999999999999999866 4555554

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PHA02597 30

Probab=98.66  E-value=5.3e-07  Score=79.41  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=60.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      +...+.||+.++++.|++.+    +++++|.+- ...-...++.+++..  .+-.  .| +.+.++...      ..|..
T Consensus        71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~~-~~~~~~~~~~~~l~~--~f~~--~f-~~i~~~~~~------~~kp~  134 (197)
T PHA02597         71 RYLSAYDDALDVINKLKEDY----DFVAVTALG-DSIDALLNRQFNLNA--LFPG--AF-SEVLMCGHD------ESKEK  134 (197)
T ss_pred             HhccCCCCHHHHHHHHHhcC----CEEEEeCCc-cchhHHHHhhCCHHH--hCCC--cc-cEEEEeccC------cccHH
Confidence            45679999999999998754    577777642 333332444444321  0000  01 011111111      12556


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhc--CeeEEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~gvv~~  271 (332)
                      .+...+.+.+   ...++|||||.+|+.++..|  |+.++.-
T Consensus       135 ~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~~  173 (197)
T PHA02597        135 LFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIHM  173 (197)
T ss_pred             HHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence            6666666665   25799999999999999999  9854443

2 hypothetical protein; Provisional

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.65  E-value=1.5e-07  Score=97.47  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=78.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||++++.+++|++.|   ++++++|+- +..-...+.++.|++  ++++                 -+++++|.+.+
T Consensus       440 Dp~R~~a~e~I~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV  496 (673)
T PRK14010        440 DVIKDGLVERFRELREMG---IETVMCTGD-NELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVI  496 (673)
T ss_pred             cCCcHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHH
Confidence            389999999999999999   999999986 377777788888873  3333                 23567899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHH
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR  277 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~  277 (332)
                      +++.++     +..+.++|||.||-|+|..||+||+|+.+...+
T Consensus       497 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA  535 (673)
T PRK14010        497 REEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA  535 (673)
T ss_pred             HHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH
Confidence            988753     246889999999999999999999999664433

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.63  E-value=1.6e-07  Score=97.60  Aligned_cols=93  Identities=22%  Similarity=0.233  Sum_probs=78.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||++++.++.|++.|   ++++++|+- +..-.+.+.+++|+  .+++++                 ..+.+|.+.+
T Consensus       536 D~~R~~a~~aI~~L~~~G---i~~~mLTGD-n~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~V  592 (713)
T COG2217         536 DELRPDAKEAIAALKALG---IKVVMLTGD-NRRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEIV  592 (713)
T ss_pred             CCCChhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHHH
Confidence            489999999999999999   999999976 47888888888887  345552                 2356899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      +++.++     +..+.+||||.||-|+|..||+||+|+.+.
T Consensus       593 ~~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~Gt  628 (713)
T COG2217         593 RELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGT  628 (713)
T ss_pred             HHHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence            998853     358999999999999999999999999764

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.63  E-value=2e-07  Score=81.37  Aligned_cols=103  Identities=16%  Similarity=0.075  Sum_probs=62.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcccc-------C-------HHHHHHHHHhcCCCcceEEeeeeEEcCceecccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI  219 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~-------s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~  219 (332)
                      ..+.||+.++|++|+++|   ++++|+|.+-       .       ...+...++.+|+....++....      ..+. 
T Consensus        28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~------~~~~-   97 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAG---YRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH------HPED-   97 (181)
T ss_pred             eEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC------CCCC-
Confidence            356899999999999998   9999999651       0       13344455555542112221100      0000 


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                        .....--+...+...+...+.. ..++++|||+.+|+.++..|++.++
T Consensus        98 --~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i  144 (181)
T PRK08942         98 --GCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPV  144 (181)
T ss_pred             --CCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEE
Confidence              0001111345555566666653 4789999999999999999998543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.60  E-value=7.3e-07  Score=97.20  Aligned_cols=98  Identities=15%  Similarity=0.130  Sum_probs=70.2

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC-c--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN-A--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~-~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      .+.||+.++|++|+++|   +++.|+|.+. ...++..++..|+. .  ..+++.+     ....+         --+..
T Consensus       161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~~-~~~~~~~L~~~gl~~~~Fd~iv~~~-----~~~~~---------KP~Pe  222 (1057)
T PLN02919        161 IGFPGALELITQCKNKG---LKVAVASSAD-RIKVDANLAAAGLPLSMFDAIVSAD-----AFENL---------KPAPD  222 (1057)
T ss_pred             ccCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHcCCChhHCCEEEECc-----ccccC---------CCCHH
Confidence            47899999999999999   9999999886 88889999888763 1  1222211     11001         11345


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .+...+.+.+.. ..+++||||+.+|+.+++.|++- |.+.
T Consensus       223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~  262 (1057)
T PLN02919        223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT  262 (1057)
T ss_pred             HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence            555666666653 47899999999999999999984 3343

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.58  E-value=3.3e-06  Score=78.74  Aligned_cols=96  Identities=20%  Similarity=0.180  Sum_probs=61.3

Q ss_pred             cEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCc---eecccccccCCC---CcchHHHHHHHHHHhCCC-CCc
Q 020024          176 NVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKES---ISTGEIIEKVES---PIDKVQAFNNTLEKYGTD-RKN  246 (332)
Q Consensus       176 ~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g---~~tG~~~~~~~~---~~~K~~~l~~~~~~~~~~-~~~  246 (332)
                      +..+.+++  ..-....+++.|+...  --+.+-+.|.++   ..||-+.+.+..   +.+|.++++.++..+... ..-
T Consensus       150 Ep~~w~~~--~~~~~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~  227 (302)
T PRK12702        150 EIFSYSGD--PARLREAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPI  227 (302)
T ss_pred             cceEecCC--HHHHHHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCc
Confidence            33455653  3333667777775311  012222223332   256655555555   789999998887665431 124


Q ss_pred             eEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          247 LSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       247 ~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .+|.+|||.||++||+.||++|++..+
T Consensus       228 ~tiaLGDspND~~mLe~~D~~vvi~~~  254 (302)
T PRK12702        228 KALGIGCSPPDLAFLRWSEQKVVLPSP  254 (302)
T ss_pred             eEEEecCChhhHHHHHhCCeeEEecCC
Confidence            799999999999999999999999755

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.56  E-value=7.4e-07  Score=81.25  Aligned_cols=90  Identities=17%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccc---cCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYC---WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g---~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..+.||++++++.++++|   +++++||+-   -....++.+++.+|++..+.+  .+.     ++|.-    ....+|.
T Consensus       113 a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~vi-----l~gd~----~~K~~K~  178 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PVI-----FAGDK----PGQYTKT  178 (237)
T ss_pred             CcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eEE-----EcCCC----CCCCCHH
Confidence            568889999999999999   999999972   124566666666787422211  111     22211    1123465


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      ..++    ++     ..++||||+.+|+.+++.||+
T Consensus       179 ~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi  205 (237)
T PRK11009        179 QWLK----KK-----NIRIFYGDSDNDITAAREAGA  205 (237)
T ss_pred             HHHH----hc-----CCeEEEcCCHHHHHHHHHcCC
Confidence            4443    22     248999999999999999998

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=98.53  E-value=7e-06  Score=74.78  Aligned_cols=94  Identities=12%  Similarity=0.075  Sum_probs=61.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.++|+.|++ +   ++++|+|.|- ..     ++..|+..  ..|++..          ...    ...-+.
T Consensus       111 ~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~~-~~-----~~~~gl~~~fd~i~~~~----------~~~----~~KP~p  166 (238)
T PRK10748        111 RIDVPQATHDTLKQLAK-K---WPLVAITNGN-AQ-----PELFGLGDYFEFVLRAG----------PHG----RSKPFS  166 (238)
T ss_pred             cCCCCccHHHHHHHHHc-C---CCEEEEECCC-ch-----HHHCCcHHhhceeEecc----------cCC----cCCCcH
Confidence            57899999999999985 4   7999999874 33     24445421  1222211          110    011144


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..+...+.+.+.. ..++++|||+ ..|+.++..+|+- |.+.
T Consensus       167 ~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~  208 (238)
T PRK10748        167 DMYHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWIN  208 (238)
T ss_pred             HHHHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEEc
Confidence            5566666666653 4789999999 5999999999984 4344

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.52  E-value=5.9e-07  Score=76.51  Aligned_cols=86  Identities=19%  Similarity=0.317  Sum_probs=69.6

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      .+++|+++|   +.+.|+|++. ...+...++.+|+.  +.+.           +        ...|...+++++.+.+.
T Consensus        36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~--~~~~-----------~--------~~~k~~~~~~~~~~~~~   90 (154)
T TIGR01670        36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGIT--HLYQ-----------G--------QSNKLIAFSDILEKLAL   90 (154)
T ss_pred             HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCC--EEEe-----------c--------ccchHHHHHHHHHHcCC
Confidence            688899999   9999999986 67888899988874  2222           1        02488888989888776


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      . .++++|||||.+|++|+..|++++++++..
T Consensus        91 ~-~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~  121 (154)
T TIGR01670        91 A-PENVAYIGDDLIDWPVMEKVGLSVAVADAH  121 (154)
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCeEecCCcC
Confidence            3 478999999999999999999999988663

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.51  E-value=4.3e-07  Score=92.47  Aligned_cols=91  Identities=22%  Similarity=0.275  Sum_probs=75.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCC-cEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~-~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      .-.+|||+.+.+++|+++|   + ++.|+|+.. ....+.+++++|++  +++++                 ..+.+|..
T Consensus       360 ~d~l~~~~~e~i~~L~~~G---i~~v~vvTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~  416 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALG---IEKVVMLTGDR-RAVAERVARELGID--EVHAE-----------------LLPEDKLE  416 (536)
T ss_pred             eccchHHHHHHHHHHHHcC---CCcEEEEcCCC-HHHHHHHHHHcCCh--hhhhc-----------------cCcHHHHH
Confidence            3589999999999999999   9 999999985 88999999998873  22221                 12357988


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      .++++..+     ..+++|+|||.||+++++.||+|+.++
T Consensus       417 ~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g  451 (536)
T TIGR01512       417 IVKELREK-----YGPVAMVGDGINDAPALAAADVGIAMG  451 (536)
T ss_pred             HHHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence            88887643     358999999999999999999999998

.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.50  E-value=6.2e-07  Score=96.04  Aligned_cols=114  Identities=17%  Similarity=0.223  Sum_probs=80.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eeeEE-cCceecc-----cccccCCCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSF-KESISTG-----EIIEKVESP  226 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~a-N~l~~-~~g~~tG-----~~~~~~~~~  226 (332)
                      -++||++++.++.|++.|   +++.++|+- +..-...+.++.|+...+++. .++.- ++..+..     .+.. -.++
T Consensus       514 Dp~R~~~~~aI~~l~~aG---I~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~~P  588 (867)
T TIGR01524       514 DPPKESTKEAIAALFKNG---INVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFA-RLTP  588 (867)
T ss_pred             CCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-ECCH
Confidence            489999999999999999   999999986 366777777888874322322 11110 0000000     0011 2567


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHH
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR  277 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~  277 (332)
                      .+|.+.++.+.++     +..+.++|||.||.|+|+.||+||+++.+..++
T Consensus       589 e~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gtdvA  634 (867)
T TIGR01524       589 MQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAADIA  634 (867)
T ss_pred             HHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCccHHH
Confidence            8999999987643     357889999999999999999999999654433

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=98.47  E-value=6.7e-06  Score=74.22  Aligned_cols=104  Identities=14%  Similarity=0.113  Sum_probs=69.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.+.||+.+++..|+++|   +++.+.|++. ...++..|...|+...   -....+.+....|+..|.        
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s~-~~~~~~~L~~~gl~~~---f~~~v~~~dv~~~KP~Pd--------  146 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARG---IPLAVASSSP-RRAAERVLARLGLLDY---FDVIVTADDVARGKPAPD--------  146 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcC---CcEEEecCCh-HHHHHHHHHHccChhh---cchhccHHHHhcCCCCCH--------
Confidence            346899999999999999998   9999999874 7789999988776320   011111112222222221        


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      -++. -..+.+. ...++|.|.||.+.+.+.+.|+.-++.-
T Consensus       147 ~yL~-Aa~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv~v  185 (221)
T COG0637         147 IYLL-AAERLGV-DPEECVVVEDSPAGIQAAKAAGMRVVGV  185 (221)
T ss_pred             HHHH-HHHHcCC-ChHHeEEEecchhHHHHHHHCCCEEEEe
Confidence            1222 2223333 2479999999999999999999854444

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.43  E-value=9.6e-07  Score=94.91  Aligned_cols=114  Identities=16%  Similarity=0.225  Sum_probs=79.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEE-eeeeEE-cCceecc-----cccccCCCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH-ANEFSF-KESISTG-----EIIEKVESP  226 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~-aN~l~~-~~g~~tG-----~~~~~~~~~  226 (332)
                      -++||++++.++.|++.|   ++++++|+- +..-...+.++.|+....++ +.++.- ++.-+..     .+. .-+++
T Consensus       549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~Vf-Ar~sP  623 (903)
T PRK15122        549 DPPKESAAPAIAALRENG---VAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVF-AKLTP  623 (903)
T ss_pred             CccHHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEE-EEeCH
Confidence            489999999999999999   999999986 36777777788887422222 111110 0000000     011 12467


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHH
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR  277 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~  277 (332)
                      .+|.+.++.+.++     +..|.++|||.||.|+|+.||+||+++.+..++
T Consensus       624 e~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvA  669 (903)
T PRK15122        624 LQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGADIA  669 (903)
T ss_pred             HHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccHHH
Confidence            7999999988753     357889999999999999999999999654443

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.43  E-value=1.2e-06  Score=94.09  Aligned_cols=112  Identities=15%  Similarity=0.205  Sum_probs=79.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eeeEE-cCceec-----ccccccCCCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSF-KESIST-----GEIIEKVESP  226 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~a-N~l~~-~~g~~t-----G~~~~~~~~~  226 (332)
                      -++||++++.++.|++.|   +.+.++|+- +..-...+.++.|+....+++ .+++- ++.-..     -.+.. -.++
T Consensus       549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sP  623 (902)
T PRK10517        549 DPPKETTAPALKALKASG---VTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTP  623 (902)
T ss_pred             CcchhhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCH
Confidence            478999999999999999   999999986 367777778888874322322 11110 000000     00111 2567


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                      .+|.+.++.+.++     +..|.++|||.||.|+|+.||+||+++.+..
T Consensus       624 e~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gtd  667 (902)
T PRK10517        624 MHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAVD  667 (902)
T ss_pred             HHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcCH
Confidence            8999999988753     3578899999999999999999999996543

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.43  E-value=1.3e-06  Score=92.37  Aligned_cols=111  Identities=17%  Similarity=0.179  Sum_probs=79.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEE-eeeeEEcC--ceec-cc---------cc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH-ANEFSFKE--SIST-GE---------II  220 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~-aN~l~~~~--g~~t-G~---------~~  220 (332)
                      -++||++++.++.|++.|   ++++++|+- +......+.++.|+.. .++ ++++.-.+  ...+ .+         +.
T Consensus       441 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf  515 (755)
T TIGR01647       441 DPPRHDTKETIERARHLG---VEVKMVTGD-HLAIAKETARRLGLGT-NIYTADVLLKGDNRDDLPSGELGEMVEDADGF  515 (755)
T ss_pred             CCChhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCC-CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence            389999999999999999   999999986 4778888888888743 122 11111000  0000 00         11


Q ss_pred             ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          221 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       221 ~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                       --.++.+|.+.++.+..+     +..|.++|||.||.|+|+.||+||+++.+..
T Consensus       516 -Ar~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gtd  564 (755)
T TIGR01647       516 -AEVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGATD  564 (755)
T ss_pred             -EecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCcH
Confidence             124667999999987642     3578899999999999999999999986543

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.41  E-value=1.1e-06  Score=76.44  Aligned_cols=110  Identities=5%  Similarity=-0.032  Sum_probs=66.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..+.++||+.++++.|+++|   +++.|+|.+-...++..++..+++... .-+...-.| +.++++.-     ....|.
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~F-d~iv~~~~-----~~~~kp  112 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLF-DDRIEIYK-----PNKAKQ  112 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhc-eeeeeccC-----CchHHH
Confidence            35789999999999999999   999999976226788888887775300 000000001 11111110     011121


Q ss_pred             --HHHHHHHHHh--CCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          231 --QAFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       231 --~~l~~~~~~~--~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                        ..++.+....  +. ...+++|||||..|+.++..|++.++..
T Consensus       113 ~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v  156 (174)
T TIGR01685       113 LEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYC  156 (174)
T ss_pred             HHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence              1222222211  23 2479999999999999999999855544

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.41  E-value=1.2e-06  Score=92.48  Aligned_cols=94  Identities=20%  Similarity=0.226  Sum_probs=76.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++|||+.+.++.|++.|   ++++++|+- +....+.+.+++|++   .+++                 ..+.+|...+
T Consensus       567 d~~r~~a~~~i~~L~~~g---i~~~llTGd-~~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~v  622 (741)
T PRK11033        567 DTLRADARQAISELKALG---IKGVMLTGD-NPRAAAAIAGELGID---FRAG-----------------LLPEDKVKAV  622 (741)
T ss_pred             cCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC---eecC-----------------CCHHHHHHHH
Confidence            589999999999999999   999999987 488888888988863   2221                 2345899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHH
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR  277 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~  277 (332)
                      +++..      ...+.++|||.||.++|..||+||+++.+....
T Consensus       623 ~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a  660 (741)
T PRK11033        623 TELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTDVA  660 (741)
T ss_pred             HHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCHHH
Confidence            88763      147999999999999999999999999664433

>PLN02811 hydrolase

Probab=98.39  E-value=4.8e-06  Score=74.84  Aligned_cols=101  Identities=9%  Similarity=0.135  Sum_probs=62.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHH-HHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~-~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ....+.||+.++|+.|+++|   +++.|+|++. ...+.. .++..++..  ..+++.+   +...-.++         -
T Consensus        75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~-~~~~~~~~~~~~~l~~~f~~i~~~~---~~~~~~~K---------P  138 (220)
T PLN02811         75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSH-KRHFDLKTQRHGELFSLMHHVVTGD---DPEVKQGK---------P  138 (220)
T ss_pred             hhCCCCccHHHHHHHHHHCC---CcEEEEeCCc-hhhHHHHHcccHHHHhhCCEEEECC---hhhccCCC---------C
Confidence            35788999999999999998   9999999875 443333 222223211  1233311   00000011         1


Q ss_pred             hHHHHHHHHHHhC---CCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          229 KVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       229 K~~~l~~~~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      +...+...+.+.+   . ...+++||||+..|+.+++.|++.++
T Consensus       139 ~p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i  181 (220)
T PLN02811        139 APDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVV  181 (220)
T ss_pred             CcHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEE
Confidence            2234444454443   3 24789999999999999999998443

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.37  E-value=2.4e-06  Score=87.43  Aligned_cols=99  Identities=22%  Similarity=0.312  Sum_probs=77.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      +-.+|||+.+.+++|+++|.  +++.|+|+.- ....+.+++++|++  +++++                 ..+.+|...
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~--i~v~ivTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~  439 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGG--IKLVMLTGDN-RSAAEAVAAELGID--EVHAE-----------------LLPEDKLAI  439 (556)
T ss_pred             cccchHhHHHHHHHHHHcCC--CeEEEEeCCC-HHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHH
Confidence            36899999999999997541  7899999885 88999999998873  33331                 123579888


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHH
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR  278 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~  278 (332)
                      ++++...     +.+++|+|||.||.+++..||+|+.++....+.+
T Consensus       440 v~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~  480 (556)
T TIGR01525       440 VKELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVAI  480 (556)
T ss_pred             HHHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHH
Confidence            8887642     3589999999999999999999999996544433

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.37  E-value=1.9e-06  Score=92.09  Aligned_cols=93  Identities=24%  Similarity=0.291  Sum_probs=75.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++|||+.+.++.+++.|   +++.++|+.- ....+.+++.+|++  +++++                 ..+.+|.+.+
T Consensus       649 d~~r~~a~~~i~~L~~~g---i~v~~~Tgd~-~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i  705 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAG---YRLVMLTGDN-PTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAI  705 (834)
T ss_pred             CcchhhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHH
Confidence            478999999999999999   9999999874 78888888888873  33331                 1134699999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      +++..+     ..++++||||.||.+++..||+||++++..
T Consensus       706 ~~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~  741 (834)
T PRK10671        706 KRLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGS  741 (834)
T ss_pred             HHHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence            887642     358999999999999999999999998764

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.34  E-value=2.3e-06  Score=75.00  Aligned_cols=85  Identities=18%  Similarity=0.356  Sum_probs=66.1

Q ss_pred             HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCC
Q 020024          164 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD  243 (332)
Q Consensus       164 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~  243 (332)
                      ++.++++|   +++.|+|+.. ...+..+++.+|+.  +++.           |        ...|...+++++...+..
T Consensus        57 i~~L~~~G---i~v~I~T~~~-~~~v~~~l~~lgl~--~~f~-----------g--------~~~k~~~l~~~~~~~gl~  111 (183)
T PRK09484         57 IRCLLTSG---IEVAIITGRK-SKLVEDRMTTLGIT--HLYQ-----------G--------QSNKLIAFSDLLEKLAIA  111 (183)
T ss_pred             HHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCc--eeec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence            45566678   9999999885 78889999988763  2221           1        234888899998888763


Q ss_pred             CCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          244 RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       244 ~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                       ..+++|||||.+|+.++..|++++++++..
T Consensus       112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~  141 (183)
T PRK09484        112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAH  141 (183)
T ss_pred             -HHHEEEECCCHHHHHHHHHCCCeEecCChh
Confidence             478999999999999999999998776443

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.34  E-value=2.2e-06  Score=74.23  Aligned_cols=91  Identities=14%  Similarity=0.289  Sum_probs=69.3

Q ss_pred             HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCC
Q 020024          164 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD  243 (332)
Q Consensus       164 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~  243 (332)
                      ++.|+++|   +++.|+|.+. ...++..++.+|+.  +++.       +     .       ..|...++.++...+..
T Consensus        43 ~~~L~~~G---i~laIiT~k~-~~~~~~~l~~lgi~--~~f~-------~-----~-------kpkp~~~~~~~~~l~~~   97 (169)
T TIGR02726        43 VIVLQLCG---IDVAIITSKK-SGAVRHRAEELKIK--RFHE-------G-----I-------KKKTEPYAQMLEEMNIS   97 (169)
T ss_pred             HHHHHHCC---CEEEEEECCC-cHHHHHHHHHCCCc--EEEe-------c-----C-------CCCHHHHHHHHHHcCcC
Confidence            45567778   9999999985 88999999998873  2221       0     0       14677888888877753


Q ss_pred             CCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          244 RKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       244 ~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                       ..+++||||+.||+.|++.|++++++.+. +.++..|
T Consensus        98 -~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A  134 (169)
T TIGR02726        98 -DAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA  134 (169)
T ss_pred             -HHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence             47899999999999999999999999865 4454444

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=98.34  E-value=2.3e-06  Score=92.55  Aligned_cols=113  Identities=19%  Similarity=0.188  Sum_probs=78.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEE-eeeeEE-cCceec---c--cccccCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVH-ANEFSF-KESIST---G--EIIEKVE  224 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~-aN~l~~-~~g~~t---G--~~~~~~~  224 (332)
                      -++||++++.++.|++.|   +++.++|+- ...-...+.++.|+..  ..++ +.++.- .+..+.   .  .+- .-+
T Consensus       578 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vf-ar~  652 (941)
T TIGR01517       578 DPLRPGVREAVQECQRAG---ITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVL-ARS  652 (941)
T ss_pred             CCCchhHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEE-EEC
Confidence            389999999999999999   999999986 3677777778888732  1111 111110 000000   0  011 125


Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhH
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSL  276 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L  276 (332)
                      ++.+|.+.++.+.+.     +..+.++|||.||.|+|+.||+||+++ .+...
T Consensus       653 sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv  700 (941)
T TIGR01517       653 SPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMGISGTEV  700 (941)
T ss_pred             CHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence            677999999987753     357889999999999999999999998 44333

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=98.33  E-value=2.1e-06  Score=93.62  Aligned_cols=109  Identities=21%  Similarity=0.257  Sum_probs=78.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEE-cCceeccccc------------
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-KESISTGEII------------  220 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~-~~g~~tG~~~------------  220 (332)
                      -++||++++.++.|++.|   +.+.+||+-- ......+.++.|+.....+.+.-+. ++.+.+|.-.            
T Consensus       645 Dp~r~~v~~aI~~l~~aG---Ikv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~  720 (1053)
T TIGR01523       645 DPPRNESAGAVEKCHQAG---INVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK  720 (1053)
T ss_pred             cCCchhHHHHHHHHHHCC---CEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence            389999999999999999   9999999874 7778888888887322111111000 1112333111            


Q ss_pred             -----ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          221 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       221 -----~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                           -.-+++.+|.+.++.+...     +..+.++|||.||.+||+.||+||+++
T Consensus       721 ~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg  771 (1053)
T TIGR01523       721 ALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMG  771 (1053)
T ss_pred             hcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecC
Confidence                 0124667899999987653     357889999999999999999999997

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>smart00775 LNS2 LNS2 domain

Probab=98.27  E-value=1.1e-05  Score=69.09  Aligned_cols=103  Identities=15%  Similarity=0.175  Sum_probs=61.6

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccc-c-CHHHHHHHHHh-----cCCCcceEEeeeeEEcCceecccccccCCC--C
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYC-W-CGDLIRASFSS-----AGLNALNVHANEFSFKESISTGEIIEKVES--P  226 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g-~-s~~~I~~~l~~-----~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~--~  226 (332)
                      +.|+..++++.++++|   ++++++|+- | .....+.++..     ++++.-.++++.     |.....+.+.+..  .
T Consensus        28 ~~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~-----g~~~~~~~~e~i~~~~   99 (157)
T smart00775       28 THPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSP-----DRLFAALHREVISKKP   99 (157)
T ss_pred             CCHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcC-----CcchhhhhcccccCCH
Confidence            3588889999999999   999999984 1 01223466655     345433555432     2111111111111  1


Q ss_pred             c-chHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          227 I-DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       227 ~-~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      . =|...++++...+......-+..+||..+|..+-..+++
T Consensus       100 ~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi  140 (157)
T smart00775      100 EVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI  140 (157)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence            1 277888887764432111234458999999999999987

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.27  E-value=6.6e-06  Score=71.45  Aligned_cols=109  Identities=11%  Similarity=0.099  Sum_probs=69.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      ++.+.||+.++|++|+++|   ++++|+|.+..              ..++...+..+++....++....... +  .+.
T Consensus        24 ~~~~~pgv~e~L~~Lk~~G---~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~-~--~~~   97 (176)
T TIGR00213        24 NFEFIDGVIDALRELKKMG---YALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPE-G--VEE   97 (176)
T ss_pred             HeEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCc-c--ccc
Confidence            3568899999999999999   99999997631              13444556655554223322111000 0  111


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      +......+--+...+...+.+.+.+ ..++++|||+.+|+.++..|++..
T Consensus        98 ~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213        98 FRQVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             ccCCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence            2111222223556777777777663 478999999999999999999854

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.27  E-value=4.8e-06  Score=89.60  Aligned_cols=108  Identities=14%  Similarity=0.231  Sum_probs=75.8

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eE-EeeeeEE-cCceec---c--cccccCCC
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NV-HANEFSF-KESIST---G--EIIEKVES  225 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I-~aN~l~~-~~g~~t---G--~~~~~~~~  225 (332)
                      ++|||+++.++.|++.|   +++.++|+- +......+.+..|+...  .+ -+.++.- ++....   .  .+. .-..
T Consensus       528 p~r~~~~~~i~~l~~~G---i~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vf-ar~~  602 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGG---VRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVF-ARAS  602 (884)
T ss_pred             cchhHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEE-EECC
Confidence            78999999999999999   999999987 47788888888887321  11 1111110 000000   0  000 1145


Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      +.+|...++.+...     +..+.++|||.||.++++.||+||.++.
T Consensus       603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g~  644 (884)
T TIGR01522       603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMGQ  644 (884)
T ss_pred             HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecCC
Confidence            67899998877642     3578899999999999999999999973

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.24  E-value=1.1e-05  Score=66.41  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=68.5

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccC-------HHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCc
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPI  227 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~  227 (332)
                      .++||+.++++.|+++|   ++++|+|.+..       ...++..++.+++....++          .++...      .
T Consensus        25 ~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~~~------K   85 (132)
T TIGR01662        25 ILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY----------ACPHCR------K   85 (132)
T ss_pred             eeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE----------ECCCCC------C
Confidence            57899999999999999   99999998730       4678888888776421111          111011      1


Q ss_pred             chHHHHHHHHHHh-CCCCCceEEEEeC-CccchHHhhhcCe-eEEEc
Q 020024          228 DKVQAFNNTLEKY-GTDRKNLSVYIGD-SVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       228 ~K~~~l~~~~~~~-~~~~~~~viyiGD-s~~Dl~~l~~Ad~-gvv~~  271 (332)
                      -|...++.++... +. ...+++|||| +.+|+.++..+++ .|.++
T Consensus        86 P~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        86 PKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             CChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            1556777777776 35 3578999999 7999999999998 44443

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=98.23  E-value=6.1e-06  Score=71.04  Aligned_cols=88  Identities=11%  Similarity=0.066  Sum_probs=57.3

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ...+.++||+.++|+.          +.|+|.+ +..++...++.+|+..  ..|++.+     .  .|.. .      -
T Consensus        86 ~~~~~~~~g~~~~L~~----------~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~-----~--~~~~-K------P  140 (175)
T TIGR01493        86 YKNLPPWPDSAAALAR----------VAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVD-----T--VRAY-K------P  140 (175)
T ss_pred             HhcCCCCCchHHHHHH----------HhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHh-----h--cCCC-C------C
Confidence            3467899999999982          5688987 5889999998887632  1122211     0  0100 0      1


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA  264 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A  264 (332)
                      ........+.+.+.. ..++++||||..|+.+++.+
T Consensus       141 ~p~~f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       141 DPVVYELVFDTVGLP-PDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             CHHHHHHHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence            234445555555653 47899999999999887653

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.21  E-value=3.8e-05  Score=69.38  Aligned_cols=99  Identities=11%  Similarity=0.124  Sum_probs=67.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc-ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA-LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~-~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ...++||+.++|+.++++|   ++++|+|.+ +....+..++..+... ...+..-  |+.  ..|        .--+..
T Consensus        93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~--fd~--~~g--------~KP~p~  156 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGY--FDT--TVG--------LKTEAQ  156 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcceE--EEe--Ccc--------cCCCHH
Confidence            4679999999999999999   999999988 5777776665532100 1111111  111  011        112445


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      .+..++.+.+.. ..+++||||+..|+.+++.||+..
T Consensus       157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~t  192 (220)
T TIGR01691       157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHT  192 (220)
T ss_pred             HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEE
Confidence            666677777663 478999999999999999999843

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.20  E-value=6e-06  Score=67.38  Aligned_cols=91  Identities=21%  Similarity=0.239  Sum_probs=68.9

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN  234 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~  234 (332)
                      .+.+...+.++.|.+-    +.++|-|+-- .-++...++-.|++...+++           |      .....|...++
T Consensus        30 klf~ev~e~iqeL~d~----V~i~IASgDr-~gsl~~lae~~gi~~~rv~a-----------~------a~~e~K~~ii~   87 (152)
T COG4087          30 KLFSEVSETIQELHDM----VDIYIASGDR-KGSLVQLAEFVGIPVERVFA-----------G------ADPEMKAKIIR   87 (152)
T ss_pred             EEcHhhHHHHHHHHHh----heEEEecCCc-chHHHHHHHHcCCceeeeec-----------c------cCHHHHHHHHH
Confidence            5777788899999875    7999999874 77888887777765333332           1      11235888888


Q ss_pred             HHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          235 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       235 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      ++.++     ++.+++||||.||.++|+.||+||+.-.
T Consensus        88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~tiq  120 (152)
T COG4087          88 ELKKR-----YEKVVMVGNGANDILALREADLGICTIQ  120 (152)
T ss_pred             HhcCC-----CcEEEEecCCcchHHHhhhcccceEEec
Confidence            87753     5789999999999999999999987654

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.17  E-value=7.5e-06  Score=88.41  Aligned_cols=112  Identities=20%  Similarity=0.192  Sum_probs=75.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCce---ecc--------c-c
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESI---STG--------E-I  219 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~---~tG--------~-~  219 (332)
                      -++||++++.++.|++.|   +++.++|+- +......+.+..|+..  ..+...  .+.+..   ...        + .
T Consensus       536 Dplr~~v~e~I~~l~~aG---I~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~  609 (917)
T TIGR01116       536 DPPRPEVADAIEKCRTAG---IRVIMITGD-NKETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAV  609 (917)
T ss_pred             CCCchhHHHHHHHHHHCC---CEEEEecCC-CHHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCe
Confidence            379999999999999999   999999976 3677888888888732  111110  011100   000        0 0


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhH
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL  276 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L  276 (332)
                      ...-+++.+|.+.++.+.. .    +..+.++|||.||.+|++.||+||+++.+...
T Consensus       610 v~ar~~P~~K~~iV~~lq~-~----g~~va~iGDG~ND~~alk~AdVGia~g~g~~~  661 (917)
T TIGR01116       610 LFSRVEPSHKSELVELLQE-Q----GEIVAMTGDGVNDAPALKKADIGIAMGSGTEV  661 (917)
T ss_pred             EEEecCHHHHHHHHHHHHh-c----CCeEEEecCCcchHHHHHhCCeeEECCCCcHH
Confidence            0012345689888886653 2    35677899999999999999999999855433

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.16  E-value=1.3e-05  Score=68.92  Aligned_cols=106  Identities=20%  Similarity=0.178  Sum_probs=71.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcccc--------------CHHHHHHHHHhcCCCcceEE-eeeeEEcCceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSSAGLNALNVH-ANEFSFKESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~--------------s~~~I~~~l~~~g~~~~~I~-aN~l~~~~g~~tG~  218 (332)
                      +.+.||+.++|++|+++|   ++++|+|..-              ....+...++.+|+....++ |-.      ..++ 
T Consensus        28 ~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~------~~~~-   97 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPH------FPDD-   97 (161)
T ss_pred             eeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCC------CCCC-
Confidence            578999999999999999   9999999731              13567778888886411222 200      0001 


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                         .....--|...+..++...+.. .++++||||+.+|+.++..+++. +.+...
T Consensus        98 ---~~~~~KP~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261        98 ---NCDCRKPKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence               1111122556777777766653 47899999999999999999984 445443

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.14  E-value=4.4e-05  Score=70.82  Aligned_cols=115  Identities=13%  Similarity=0.130  Sum_probs=71.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.+|++.++++|   .+++|||..-  +.......|+.+|++..  .-..+...++            ...|.
T Consensus       116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~--~~d~lllr~~------------~~~K~  178 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKG---VKIFYVSNRSEKEKAATLKNLKRFGFPQA--DEEHLLLKKD------------KSSKE  178 (266)
T ss_pred             CCCcCccHHHHHHHHHHCC---CeEEEEeCCCcchHHHHHHHHHHcCcCCC--CcceEEeCCC------------CCCcH
Confidence            4668899999999999999   9999999863  13344466777787531  0011111110            12476


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc--CChhHHHHhHhcCCeeeecCc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG--SSSSLRRVGSQFGVTFIPLYP  292 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~--~~~~L~~~~~~~~~~~~p~~~  292 (332)
                      .+.+.+.+.     +.-+++|||..+|+......+  . -.  ....+.+....+|-+|+-|-.
T Consensus       179 ~rr~~I~~~-----y~Ivl~vGD~~~Df~~~~~~~--~-~~~~r~~~v~~~~~~fG~~~i~lPN  234 (266)
T TIGR01533       179 SRRQKVQKD-----YEIVLLFGDNLLDFDDFFYKD--K-ESQDRQALVLQNQEKFGKKFIILPN  234 (266)
T ss_pred             HHHHHHHhc-----CCEEEEECCCHHHhhhhhccC--c-chHHHHHHHHHHHHHhCCCeEEecC
Confidence            666655543     245889999999996433322  1 11  223466777888877775544

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.14  E-value=1.3e-05  Score=83.63  Aligned_cols=93  Identities=22%  Similarity=0.258  Sum_probs=77.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||++...+..|++.|   ++++++|+-- ..-.+.+.++.|+  ..|+|+-                 .+.+|.+.+
T Consensus       722 D~vr~~a~~av~~Lk~~G---i~v~mLTGDn-~~aA~svA~~VGi--~~V~aev-----------------~P~~K~~~I  778 (951)
T KOG0207|consen  722 DQVRPDAALAVAELKSMG---IKVVMLTGDN-DAAARSVAQQVGI--DNVYAEV-----------------LPEQKAEKI  778 (951)
T ss_pred             cccchhHHHHHHHHHhcC---ceEEEEcCCC-HHHHHHHHHhhCc--ceEEecc-----------------CchhhHHHH
Confidence            389999999999999999   9999999753 5667777788775  4566632                 234799999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      +++..+     ...+.++|||.||-|+|..||+||+++.++
T Consensus       779 k~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs  814 (951)
T KOG0207|consen  779 KEIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGS  814 (951)
T ss_pred             HHHHhc-----CCcEEEEeCCCCccHHHHhhccceeecccc
Confidence            998864     257999999999999999999999999874

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.05  E-value=0.00036  Score=62.39  Aligned_cols=101  Identities=18%  Similarity=0.210  Sum_probs=68.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch--H
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K--~  230 (332)
                      .++..|++.++++.++.+    ++++|+|-|. .......+++.|+..   +...+.+.+  ..|         ..|  .
T Consensus        97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg~-~~~~~~~l~~~gl~~---~Fd~v~~s~--~~g---------~~KP~~  157 (229)
T COG1011          97 LLPDYPEALEALKELGKK----YKLGILTNGA-RPHQERKLRQLGLLD---YFDAVFISE--DVG---------VAKPDP  157 (229)
T ss_pred             hCccChhHHHHHHHHHhh----ccEEEEeCCC-hHHHHHHHHHcCChh---hhheEEEec--ccc---------cCCCCc
Confidence            378999999999998864    7899999885 788889998888632   122221111  112         112  2


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccch-HHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDL-LCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl-~~l~~Ad~-gvv~~~~  273 (332)
                      +..+..+...+.. ..++++||||.... ..+..+|. +|.++..
T Consensus       158 ~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~  201 (229)
T COG1011         158 EIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG  201 (229)
T ss_pred             HHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence            4555566666653 47899999987655 99999997 5666654

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=98.01  E-value=2.8e-05  Score=80.45  Aligned_cols=113  Identities=17%  Similarity=0.205  Sum_probs=82.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccc-ccc-----------
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE-IIE-----------  221 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~-~~~-----------  221 (332)
                      -+.||+.++-++.|++.|   +++++|++-. ..-.+.+.++.|+     +++.-++.+-.+||. |+.           
T Consensus       583 DPPR~ev~~ai~~c~~aG---IrV~mITGD~-~~TA~AI~r~iGi-----~~~~ed~~~~~~TG~efD~ls~~~~~~~~~  653 (972)
T KOG0202|consen  583 DPPRPEVADAIELCRQAG---IRVIMITGDN-KETAEAIAREIGI-----FSEDEDVSSMALTGSEFDDLSDEELDDAVR  653 (972)
T ss_pred             CCCchhHHHHHHHHHHcC---CEEEEEcCCC-HHHHHHHHHHhCC-----CcCCccccccccchhhhhcCCHHHHHHHhh
Confidence            378999999999999999   9999999864 7777777788775     344444444445552 210           


Q ss_pred             -----cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhHHHHh
Q 020024          222 -----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG  280 (332)
Q Consensus       222 -----~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L~~~~  280 (332)
                           .=+.+..|.+.++.+.+.     ++-+-.-|||.||-|+|+.||+||+|+ .+...++-|
T Consensus       654 ~~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA  713 (972)
T KOG0202|consen  654 RVLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA  713 (972)
T ss_pred             cceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence                 014556899999876642     245668999999999999999999999 444333333

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.93  E-value=2.7e-05  Score=84.83  Aligned_cols=115  Identities=17%  Similarity=0.176  Sum_probs=76.5

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceE---EeeeeE--E------c--Cceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNV---HANEFS--F------K--ESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I---~aN~l~--~------~--~g~~tG~  218 (332)
                      -++||+.++.++.++++|   +.++++|+- +..-+..+.++.|+-.  ...   +...+.  .      +  .-+.+|.
T Consensus       567 Dplr~~v~~aI~~l~~~G---i~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~  642 (997)
T TIGR01106       567 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS  642 (997)
T ss_pred             CCChHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence            389999999999999999   999999986 3667777777777611  000   000000  0      0  0122221


Q ss_pred             c---------c---c-------cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhHH
Q 020024          219 I---------I---E-------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLR  277 (332)
Q Consensus       219 ~---------~---~-------~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L~  277 (332)
                      -         .   .       .-.++.+|.+.++.+...     +..+.++|||.||.+||+.||+||+++ .+...+
T Consensus       643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va  716 (997)
T TIGR01106       643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS  716 (997)
T ss_pred             HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence            1         0   0       013456899999877642     246789999999999999999999997 344333

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.91  E-value=5.4e-05  Score=69.78  Aligned_cols=48  Identities=23%  Similarity=0.320  Sum_probs=41.6

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .+..|...++.++..++.+ .+++++||||.||++|++.|++||+++..
T Consensus       196 ~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna  243 (272)
T PRK10530        196 KGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNA  243 (272)
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCc
Confidence            3446999999999888874 47899999999999999999999999754

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.90  E-value=1.5e-05  Score=73.53  Aligned_cols=58  Identities=21%  Similarity=0.404  Sum_probs=48.9

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~  281 (332)
                      ...+..|...++.+++.++.+ .++++++|||.||++|++.|++||+|++. +.+++.|.
T Consensus       191 ~~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~  249 (270)
T PRK10513        191 LDKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQ  249 (270)
T ss_pred             eCCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcC
Confidence            445678999999999988874 47899999999999999999999999965 56666653

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.89  E-value=2.7e-05  Score=83.97  Aligned_cols=108  Identities=17%  Similarity=0.207  Sum_probs=75.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCc---eecc-ccc-----c---
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES---ISTG-EII-----E---  221 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g---~~tG-~~~-----~---  221 (332)
                      -++||+.++.++.|+++|   +.+.++|+-- ..-...+.++.|+.... .. .+..+|.   ...+ ++.     .   
T Consensus       546 Dppr~~v~~aI~~l~~AG---I~v~MiTGD~-~~TA~aIa~~~Gi~~~~-~~-~~vi~G~el~~l~~~el~~~~~~~~Vf  619 (917)
T COG0474         546 DPPREDVKEAIEELREAG---IKVWMITGDH-VETAIAIAKECGIEAEA-ES-ALVIDGAELDALSDEELAELVEELSVF  619 (917)
T ss_pred             CCCCccHHHHHHHHHHCC---CcEEEECCCC-HHHHHHHHHHcCCCCCC-Cc-eeEeehHHhhhcCHHHHHHHhhhCcEE
Confidence            489999999999999999   9999999752 55566666777763211 00 1122211   0111 110     0   


Q ss_pred             cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          222 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       222 ~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      -=.++..|.+.++.+.+.     +..+.+.|||.||.|||+.||+||.++.
T Consensus       620 ARvsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~  665 (917)
T COG0474         620 ARVSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGG  665 (917)
T ss_pred             EEcCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence            114567999999988764     3577899999999999999999998885

>PRK10976 putative hydrolase; Provisional

Probab=97.86  E-value=1.8e-05  Score=72.92  Aligned_cols=58  Identities=21%  Similarity=0.306  Sum_probs=49.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~  281 (332)
                      ...+..|...++.+++.++.+ .++++++|||.||++|++.|++||+|++. +.+++.|.
T Consensus       185 ~~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~  243 (266)
T PRK10976        185 MAGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP  243 (266)
T ss_pred             EcCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence            455678999999999988874 47899999999999999999999999966 56666663

>PRK06769 hypothetical protein; Validated

Probab=97.85  E-value=8.5e-05  Score=64.44  Aligned_cols=102  Identities=16%  Similarity=0.174  Sum_probs=63.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH--------HHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--------LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVES  225 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~--------~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~  225 (332)
                      +.+.||+.++|++|+++|   +++.|+|.+. ..        -+...++..|+.  .++....      .++.   ....
T Consensus        27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~~-~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~------~~~~---~~~~   91 (173)
T PRK06769         27 FTLFPFTKASLQKLKANH---IKIFSFTNQP-GIADGIATIADFVQELKGFGFD--DIYLCPH------KHGD---GCEC   91 (173)
T ss_pred             eEECCCHHHHHHHHHHCC---CEEEEEECCc-hhcCCcCCHHHHHHHHHhCCcC--EEEECcC------CCCC---CCCC
Confidence            457899999999999999   9999999752 21        122235555552  2221000      0000   0001


Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      .--+...+.+.+++.+. ...+++||||+.+|+.++..|++ .|.+.
T Consensus        92 ~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v~  137 (173)
T PRK06769         92 RKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILVR  137 (173)
T ss_pred             CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence            11144566666666665 34789999999999999999998 44444

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.84  E-value=0.00011  Score=74.27  Aligned_cols=120  Identities=12%  Similarity=0.075  Sum_probs=76.4

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCH------------HHHHHHHHhcCCCcceEEeeeeEEcCceecccccccC
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKV  223 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~  223 (332)
                      +.||+.+.|+.|+++|   +.++|+|.-- .            ..+..+++.+|++...++|..    ++          
T Consensus       198 l~pgV~e~L~~L~~~G---y~IvIvTNQ~-gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~~----------  259 (526)
T TIGR01663       198 IFPEIPEKLKELEADG---FKICIFTNQG-GIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----AG----------  259 (526)
T ss_pred             cccCHHHHHHHHHHCC---CEEEEEECCc-ccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----CC----------
Confidence            5789999999999999   9999999631 2            347788888887533233321    10          


Q ss_pred             CCCcchHHHHHHHHHHhC----CCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHhHhcCCeeeecCchhhh
Q 020024          224 ESPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPLYPGLVK  296 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~----~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~~~~~~~~~p~~~~~~~  296 (332)
                      .+.--+...+..++..++    . ...+++||||+.+|+.+...|+.  --.+ +..=+.+|...|++|..-++-.++
T Consensus       260 ~~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~--~~~D~s~~D~~FA~n~gi~F~tPee~Fl~  334 (526)
T TIGR01663       260 FYRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGK--KKKDFSCADRLFAANLGIPFATPEEFFLG  334 (526)
T ss_pred             CCCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCC--CcCCCChhhHHHHHHcCCcccChHHHhCC
Confidence            011112344555555443    2 24689999999999988777652  0010 123467888899988866664443

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.83  E-value=7.3e-05  Score=81.97  Aligned_cols=111  Identities=13%  Similarity=0.110  Sum_probs=76.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEee-----------eeEEc---C-----
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHAN-----------EFSFK---E-----  212 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~--~~~I~aN-----------~l~~~---~-----  212 (332)
                      -++||+.++.++.|++.|   +++.++|+-- ..-...+.++.|+-  +..++.-           .+.+.   +     
T Consensus       655 d~lr~~~~~~I~~l~~ag---i~v~miTGD~-~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (1054)
T TIGR01657       655 NPLKPDTKEVIKELKRAS---IRTVMITGDN-PLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAS  730 (1054)
T ss_pred             cCCCccHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccc
Confidence            489999999999999999   9999999863 66677777787872  1122211           11100   0     


Q ss_pred             -----------------------ceeccccc---------------c--c---CCCCcchHHHHHHHHHHhCCCCCceEE
Q 020024          213 -----------------------SISTGEII---------------E--K---VESPIDKVQAFNNTLEKYGTDRKNLSV  249 (332)
Q Consensus       213 -----------------------g~~tG~~~---------------~--~---~~~~~~K~~~l~~~~~~~~~~~~~~vi  249 (332)
                                             -..||...               .  .   =.++.+|.+.++.+.+.     +..+.
T Consensus       731 ~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-----g~~V~  805 (1054)
T TIGR01657       731 TQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-----DYTVG  805 (1054)
T ss_pred             ccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-----CCeEE
Confidence                                   01233110               0  0   14567888888877642     35788


Q ss_pred             EEeCCccchHHhhhcCeeEEEcCC
Q 020024          250 YIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       250 yiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++|||.||.++|+.||+||+++..
T Consensus       806 m~GDG~ND~~ALK~AdVGIam~~~  829 (1054)
T TIGR01657       806 MCGDGANDCGALKQADVGISLSEA  829 (1054)
T ss_pred             EEeCChHHHHHHHhcCcceeeccc
Confidence            999999999999999999999854

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.83  E-value=6.1e-05  Score=76.04  Aligned_cols=87  Identities=23%  Similarity=0.253  Sum_probs=70.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||++.+.++.+++.|   +.+.++|+.- ......+.+..|+     ++                 ...+.+|.+.+
T Consensus       346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD~-~~~a~~ia~~lgi-----~~-----------------~~~p~~K~~~v  399 (499)
T TIGR01494       346 DPLRDDAKETISELREAG---IRVIMLTGDN-VLTAKAIAKELGI-----FA-----------------RVTPEEKAALV  399 (499)
T ss_pred             CCCchhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCc-----ee-----------------ccCHHHHHHHH
Confidence            489999999999999998   8999999874 6666666666553     11                 14566899999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      +++...     +..+.++|||.||.+++..||+||+++
T Consensus       400 ~~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~  432 (499)
T TIGR01494       400 EALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG  432 (499)
T ss_pred             HHHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence            887542     357999999999999999999999997

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=97.83  E-value=3.7e-05  Score=68.98  Aligned_cols=58  Identities=22%  Similarity=0.308  Sum_probs=48.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~  281 (332)
                      ...+..|...++.++...+.. ..+++++|||.||++|++.+++||+|++. +.+++.|.
T Consensus       181 ~~~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~  239 (254)
T PF08282_consen  181 TPKGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD  239 (254)
T ss_dssp             EETTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred             eeCCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence            345678999999999888874 47999999999999999999999999966 45555553

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.82  E-value=0.00015  Score=61.70  Aligned_cols=107  Identities=16%  Similarity=0.166  Sum_probs=65.9

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccc--cCHHHHHHHHHhc-----CCCcceEEeeeeEEcCceecccccccCCCCcc
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSSA-----GLNALNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g--~s~~~I~~~l~~~-----g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      .++|+.++++.++++|   +.++=+|+-  |-....+.+|..+     ++|.=.++.+.-..- +.+..+...+ ....-
T Consensus        28 ~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~-~al~rEvi~~-~p~~f  102 (157)
T PF08235_consen   28 THPGAAELYRKIADNG---YKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLF-SALHREVISK-DPEEF  102 (157)
T ss_pred             hhhcHHHHHHHHHHCC---eEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchh-hhhhcccccc-ChHHH
Confidence            4678889999999999   999999972  1145556666655     555445555421100 0011111111 11235


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      |...|+.+...+......-...+|...+|..+-..+++.
T Consensus       103 K~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  103 KIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             HHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence            889999888764321223455799999999999999973

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.80  E-value=3.3e-05  Score=71.59  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=57.6

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhHhcCCeeee--cCchhhhhhh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGVTFIP--LYPGLVKKQK  299 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~~~~~~~~p--~~~~~~~~~~  299 (332)
                      ...+..|...++.+++.++.+ .++++++|||.||++|++.|++||+|++. +.+++.|...  .+.+  -..|+...++
T Consensus       183 ~~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~--~v~~~n~edGva~~l~  259 (272)
T PRK15126        183 LPVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHL--PVIGHCRNQAVSHYLT  259 (272)
T ss_pred             ecCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCC--eecCCCcchHHHHHHH
Confidence            345668999999999998874 47899999999999999999999999976 4566655321  1222  2336666666


Q ss_pred             hhhc
Q 020024          300 EYTE  303 (332)
Q Consensus       300 ~~~~  303 (332)
                      .|..
T Consensus       260 ~~~~  263 (272)
T PRK15126        260 HWLD  263 (272)
T ss_pred             HHhc
Confidence            6553

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.80  E-value=2.6e-05  Score=65.87  Aligned_cols=94  Identities=13%  Similarity=0.059  Sum_probs=60.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .+.+|||+.+||++|+ ++   ++++|+|++- ..+++.+++.+++.. . +...+...+....+           |..+
T Consensus        43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~~-~~~~~~il~~l~~~~-~-~f~~i~~~~d~~~~-----------KP~~  104 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-EL---FELVVFTAGL-RMYADPVLDLLDPKK-Y-FGYRRLFRDECVFV-----------KGKY  104 (148)
T ss_pred             EEEECCCHHHHHHHHH-hc---cEEEEEeCCc-HHHHHHHHHHhCcCC-C-EeeeEEECcccccc-----------CCeE
Confidence            4678999999999998 56   8999999994 899999998876521 1 11111111111111           1111


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      ++ -+...+. ...++|+||||.+|+.+...+++
T Consensus       105 ~k-~l~~l~~-~p~~~i~i~Ds~~~~~aa~~ngI  136 (148)
T smart00577      105 VK-DLSLLGR-DLSNVIIIDDSPDSWPFHPENLI  136 (148)
T ss_pred             ee-cHHHcCC-ChhcEEEEECCHHHhhcCccCEE
Confidence            11 1222333 24789999999999998777753

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.74  E-value=5.8e-05  Score=69.55  Aligned_cols=58  Identities=21%  Similarity=0.339  Sum_probs=49.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~  281 (332)
                      ...+.+|...++.+++.++.. ..+++++|||.||++|++.|++||+|++. +.++++|.
T Consensus       184 ~~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~  242 (264)
T COG0561         184 TPKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD  242 (264)
T ss_pred             ecCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence            456778999999999988874 46899999999999999999999999976 56666665

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=97.71  E-value=0.0002  Score=61.84  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=64.0

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCH------------HHHHHHHHhcCCCcceEEeeeeEEcCceecccccccC
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKV  223 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~  223 (332)
                      +.||+.++|+.|+++|   ++++|+|.+- .            ..++.+++.+|+....+++..    ++    .     
T Consensus        43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~~-~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~----~~----~-----  105 (166)
T TIGR01664        43 LYPEIPAKLQELDDEG---YKIVIFTNQS-GIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH----AG----L-----  105 (166)
T ss_pred             ecCCHHHHHHHHHHCC---CEEEEEeCCc-ccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC----CC----C-----
Confidence            5799999999999999   9999999863 3            246778888886432222211    00    0     


Q ss_pred             CCCcchHHHHHHHHHHhC--CCCCceEEEEeCCc--------cchHHhhhcCeeE
Q 020024          224 ESPIDKVQAFNNTLEKYG--TDRKNLSVYIGDSV--------GDLLCLLEADIGI  268 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~--~~~~~~viyiGDs~--------~Dl~~l~~Ad~gv  268 (332)
                       ..--+...++..+.+.+  .+ ..+++||||+.        +|+.++..|++.+
T Consensus       106 -~~KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~  158 (166)
T TIGR01664       106 -YRKPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF  158 (166)
T ss_pred             -CCCCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence             01113456666666665  42 46899999996        6999999998643

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=97.67  E-value=0.00012  Score=72.28  Aligned_cols=92  Identities=22%  Similarity=0.354  Sum_probs=66.6

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHH-HhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASF-SSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l-~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      .+.||.+|.|..+|+-|   ++.+.+++-  ..+-...+ ++.|++  .                |. -.+++++|.+.+
T Consensus       447 ivK~Gi~ERf~elR~Mg---IkTvM~TGD--N~~TAa~IA~EAGVD--d----------------fi-AeatPEdK~~~I  502 (681)
T COG2216         447 IVKPGIKERFAELRKMG---IKTVMITGD--NPLTAAAIAAEAGVD--D----------------FI-AEATPEDKLALI  502 (681)
T ss_pred             hcchhHHHHHHHHHhcC---CeEEEEeCC--CHHHHHHHHHHhCch--h----------------hh-hcCChHHHHHHH
Confidence            57788888888888877   888888864  23333333 344542  1                21 135678999999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                      ++...+     +.-+-+.|||.||-|+|..||+|++|+.+..
T Consensus       503 ~~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTq  539 (681)
T COG2216         503 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQ  539 (681)
T ss_pred             HHHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccH
Confidence            887653     3456799999999999999999999998743

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.67  E-value=0.00032  Score=60.67  Aligned_cols=95  Identities=12%  Similarity=0.081  Sum_probs=66.4

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      ..+.||+.++++.|+++|   .+++|+|.+-....+..+++.+|+.   .+           .+.       .--+...+
T Consensus        42 ~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~~~~~~~~~~~~~~gl~---~~-----------~~~-------~KP~p~~~   97 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAG---RKLLIVSNNAGEQRAKAVEKALGIP---VL-----------PHA-------VKPPGCAF   97 (170)
T ss_pred             CCcChhHHHHHHHHHHcC---CEEEEEeCCchHHHHHHHHHHcCCE---EE-----------cCC-------CCCChHHH
Confidence            467899999999999999   9999999873146666666665541   11           010       01134556


Q ss_pred             HHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEcCC
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ...+.+.+.. ..+++||||+. +|+.++..+++ .|.+..+
T Consensus        98 ~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g  138 (170)
T TIGR01668        98 RRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVEPL  138 (170)
T ss_pred             HHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEccC
Confidence            6666666653 47899999998 79999999998 4555433

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.66  E-value=5.5e-05  Score=70.20  Aligned_cols=50  Identities=22%  Similarity=0.257  Sum_probs=43.1

Q ss_pred             CCCCcchHHHHHHHHHHhCC---CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~---~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ...+.+|...++.+++.++.   + ..+++++|||.||++|++.|++||+|++.
T Consensus       182 ~~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~~~  234 (271)
T PRK03669        182 LDASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVKGL  234 (271)
T ss_pred             ecCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEecCC
Confidence            34567899999999988876   4 37899999999999999999999999833

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.62  E-value=6.7e-05  Score=67.15  Aligned_cols=56  Identities=20%  Similarity=0.285  Sum_probs=45.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.++..++.+ ..+++++|||.||++|++.|++|++|++. +.+++.|
T Consensus       145 ~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A  201 (225)
T TIGR01482       145 PQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA  201 (225)
T ss_pred             eCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence            34567999999999888774 47899999999999999999999999965 4455544

catalyze the same reaction as SPP.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.60  E-value=8.2e-05  Score=66.88  Aligned_cols=56  Identities=23%  Similarity=0.344  Sum_probs=46.1

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.++..++.+ ..+++++|||.||++|++.|++++++++. +.+++.|
T Consensus       153 ~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a  209 (230)
T PRK01158        153 SPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA  209 (230)
T ss_pred             eCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence            34567999999999888774 47899999999999999999999999755 4555554

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.57  E-value=0.00021  Score=60.30  Aligned_cols=84  Identities=19%  Similarity=0.353  Sum_probs=66.0

Q ss_pred             HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCC
Q 020024          164 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD  243 (332)
Q Consensus       164 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~  243 (332)
                      ++.+.+.|   +++.|+|+-- +..++.-++.+|+..  +           +.|.        .+|..+.++++.+.+..
T Consensus        44 ik~l~~~G---i~vAIITGr~-s~ive~Ra~~LGI~~--~-----------~qG~--------~dK~~a~~~L~~~~~l~   98 (170)
T COG1778          44 IKLLLKSG---IKVAIITGRD-SPIVEKRAKDLGIKH--L-----------YQGI--------SDKLAAFEELLKKLNLD   98 (170)
T ss_pred             HHHHHHcC---CeEEEEeCCC-CHHHHHHHHHcCCce--e-----------eech--------HhHHHHHHHHHHHhCCC
Confidence            44556667   9999999875 567787888888632  2           2332        36999999999998884


Q ss_pred             CCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          244 RKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       244 ~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                       +.++.|+||-.+|+|+++.++++++.++.
T Consensus        99 -~e~~ayiGDD~~Dlpvm~~vGls~a~~dA  127 (170)
T COG1778          99 -PEEVAYVGDDLVDLPVMEKVGLSVAVADA  127 (170)
T ss_pred             -HHHhhhhcCccccHHHHHHcCCccccccc
Confidence             58999999999999999999988777654

>PLN02887 hydrolase family protein

Probab=97.56  E-value=9.1e-05  Score=75.85  Aligned_cols=57  Identities=21%  Similarity=0.304  Sum_probs=48.6

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ...+..|...++.++..++.+ .++++++|||.||++|++.|++||+|++. +.+++.|
T Consensus       502 ~p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~A  559 (580)
T PLN02887        502 VPPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVA  559 (580)
T ss_pred             ecCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhC
Confidence            455678999999999998874 47999999999999999999999999966 4566655

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=97.51  E-value=0.00014  Score=65.20  Aligned_cols=46  Identities=28%  Similarity=0.259  Sum_probs=39.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ..+..|...++.+++..+.+ ..+++++|||.||++|++.|++||++
T Consensus       175 ~~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       175 GASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             cCCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence            34556999999999888874 57899999999999999999999986

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=97.49  E-value=0.00041  Score=57.11  Aligned_cols=93  Identities=12%  Similarity=-0.004  Sum_probs=62.6

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceE--EeeeeEEcCceecccccccCCCCcchHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNV--HANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I--~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .++||+.++++.++++|   ++++|+|.++...++...++..+. ...+  +..-  | +....+..       ..|...
T Consensus        29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~~l~~~--f-~~~~~~~~-------~pkp~~   94 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFED-FGIIFPLAEY--F-DPLTIGYW-------LPKSPR   94 (128)
T ss_pred             HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhccc-cccchhhHhh--h-hhhhhcCC-------CcHHHH
Confidence            68899999999999999   999999998558888888876540 0000  0000  0 01111110       126667


Q ss_pred             HHHHHHHhC--CCCCceEEEEeCCccchHHhh
Q 020024          233 FNNTLEKYG--TDRKNLSVYIGDSVGDLLCLL  262 (332)
Q Consensus       233 l~~~~~~~~--~~~~~~viyiGDs~~Dl~~l~  262 (332)
                      +...+.+.+  .. ..+++||||+..|+...+
T Consensus        95 ~~~a~~~lg~~~~-p~~~l~igDs~~n~~~~~  125 (128)
T TIGR01681        95 LVEIALKLNGVLK-PKSILFVDDRPDNNEEVD  125 (128)
T ss_pred             HHHHHHHhcCCCC-cceEEEECCCHhHHHHHH
Confidence            777777777  53 579999999999987654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.49  E-value=0.00015  Score=65.78  Aligned_cols=58  Identities=22%  Similarity=0.235  Sum_probs=47.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQ  282 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~~  282 (332)
                      ..+.+|...++.++.+++.+ ..+++++|||.||++|+..+++||++++. +.+++.+..
T Consensus       155 ~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~  213 (236)
T TIGR02471       155 PLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ  213 (236)
T ss_pred             eCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence            44668999999999888763 46899999999999999999999999754 567777653

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=97.48  E-value=0.00057  Score=75.11  Aligned_cols=112  Identities=18%  Similarity=0.164  Sum_probs=72.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-C-cceEE---eee---------------------
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-N-ALNVH---ANE---------------------  207 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~-~~~I~---aN~---------------------  207 (332)
                      -++|||.++.++.|++.|   +++.++|+- ..+-...+....|+ + +..++   .+.                     
T Consensus       630 D~lq~~v~etI~~L~~AG---Ikv~mlTGD-~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~  705 (1057)
T TIGR01652       630 DKLQEGVPETIELLRQAG---IKIWVLTGD-KVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEE  705 (1057)
T ss_pred             hhhhhccHHHHHHHHHCC---CeEEEEcCC-cHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHh
Confidence            489999999999999999   999999974 24555555555554 1 11111   110                     


Q ss_pred             -----------eEEcCce----eccc----cc----------ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccch
Q 020024          208 -----------FSFKESI----STGE----II----------EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL  258 (332)
Q Consensus       208 -----------l~~~~g~----~tG~----~~----------~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl  258 (332)
                                 +.+++..    ....    +.          ..-+++..|.+.++.+....    +..+.++|||.||.
T Consensus       706 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~  781 (1057)
T TIGR01652       706 FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST----GKTTLAIGDGANDV  781 (1057)
T ss_pred             hhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC----CCeEEEEeCCCccH
Confidence                       1122110    0000    10          01244568888888665431    25788999999999


Q ss_pred             HHhhhcCeeEEEcCC
Q 020024          259 LCLLEADIGIVIGSS  273 (332)
Q Consensus       259 ~~l~~Ad~gvv~~~~  273 (332)
                      +|++.||+||.+...
T Consensus       782 ~mlk~AdVGIgi~g~  796 (1057)
T TIGR01652       782 SMIQEADVGVGISGK  796 (1057)
T ss_pred             HHHhhcCeeeEecCh
Confidence            999999999987654

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=97.45  E-value=0.00018  Score=66.10  Aligned_cols=50  Identities=28%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             CCcchHHHHHHHHHHhCCC-CCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          225 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      .+..|...++.+++.++.. ...+++++|||.||++|++.|++||+|++..
T Consensus       173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~  223 (256)
T TIGR01486       173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPN  223 (256)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCC
Confidence            4567999999998887753 1478999999999999999999999999763

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=97.45  E-value=0.00039  Score=65.24  Aligned_cols=105  Identities=4%  Similarity=-0.155  Sum_probs=66.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc---ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~---~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..+.||+.++++.++++|   .+++|+|+.- ....+..++.+++..   ..+++-+       ....+......+..+.
T Consensus       186 ~~~~~~~~~~l~~l~~~g---~~i~i~T~r~-~~~~~~~l~~l~~~~~~f~~i~~~~-------~~~~~~~~~~~~kp~p  254 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAG---YEIIVVSGRD-GVCEEDTVEWLRQTDIWFDDLIGRP-------PDMHFQREQGDKRPDD  254 (300)
T ss_pred             CCCChhHHHHHHHHHhCC---CEEEEEeCCC-hhhHHHHHHHHHHcCCchhhhhCCc-------chhhhcccCCCCCCcH
Confidence            468999999999999998   9999999884 788888887765421   1111211       0000110000111122


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+...+.+.+...+..++||||+.+|+.+.+.|++.++
T Consensus       255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i  293 (300)
T PHA02530        255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW  293 (300)
T ss_pred             HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence            333434433333234789999999999999999998644

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=97.42  E-value=0.00017  Score=66.12  Aligned_cols=57  Identities=21%  Similarity=0.360  Sum_probs=46.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ...+..|...++.++..++.. ..+++++|||.||++|+..|++++++++. +.+++.|
T Consensus       183 ~~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a  240 (256)
T TIGR00099       183 TAKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALA  240 (256)
T ss_pred             cCCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhC
Confidence            345678999999999888763 47899999999999999999999999744 4444443

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PLN03190 aminophospholipid translocase; Provisional

Probab=97.41  E-value=0.0011  Score=73.39  Aligned_cols=46  Identities=22%  Similarity=0.406  Sum_probs=35.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +++..|.+.++-+... +   ...+.++|||.||.+|++.||+||-+...
T Consensus       854 ~sP~QKa~IV~~vk~~-~---~~vtlaIGDGaNDv~mIq~AdVGIGIsG~  899 (1178)
T PLN03190        854 VAPLQKAGIVALVKNR-T---SDMTLAIGDGANDVSMIQMADVGVGISGQ  899 (1178)
T ss_pred             CCHHHHHHHHHHHHhc-C---CcEEEEECCCcchHHHHHhcCeeeeecCc
Confidence            4566888888765542 1   24688999999999999999999987655

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=97.40  E-value=0.00054  Score=59.28  Aligned_cols=107  Identities=15%  Similarity=0.142  Sum_probs=63.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCcee-cccccccCCCCcch
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIS-TGEIIEKVESPIDK  229 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~-tG~~~~~~~~~~~K  229 (332)
                      ++.+.++|++.+.|+.|+++|   +++.|.|-.+..+..+.+|+.++++..    +.    .++. ...|...-....+|
T Consensus        41 g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~~~----~~----~~~~~~~~F~~~eI~~gsK  109 (169)
T PF12689_consen   41 GEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEIDDA----DG----DGVPLIEYFDYLEIYPGSK  109 (169)
T ss_dssp             --EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C------------------CCECEEEESSS-H
T ss_pred             CCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCCcc----cc----ccccchhhcchhheecCch
Confidence            457899999999999999999   999999977678899999998876400    00    0110 01111111122379


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..+++++.+..+. .+..++|+=|-..-......-|+-.+
T Consensus       110 ~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV~~v  148 (169)
T PF12689_consen  110 TTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGVTCV  148 (169)
T ss_dssp             HHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EEE
T ss_pred             HHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCcEEE
Confidence            9999999988887 47899999999988887776565333

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.37  E-value=0.0024  Score=56.12  Aligned_cols=116  Identities=15%  Similarity=0.225  Sum_probs=61.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .++..||+.+.++.|.+.|   ...++||+.- .          ..+                       ..+...|.+-
T Consensus        71 ~l~p~~gA~e~l~~L~~~g---~~~~~Itar~-~----------~~~-----------------------~~~~~~k~~W  113 (191)
T PF06941_consen   71 NLPPIPGAVEALKKLRDKG---HEIVIITARP-P----------EFP-----------------------DHSAEEKREW  113 (191)
T ss_dssp             T--B-TTHHHHHHHHHTST---TEEEEEEE-S-S----------SSG-----------------------CCCHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHcC---CcEEEEEecC-c----------ccc-----------------------chHHHHHHHH
Confidence            4778899999999999988   7888888632 1          000                       0011235444


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCeeeecCchhhhhhhhhhcCCCCCcccc
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEK  312 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  312 (332)
                      |++.....   ...++++.||-     .+..+|  +.+-+.+.-..-+...|++.+=|..               .|.+.
T Consensus       114 l~~hf~~i---~~~~~~~~~~K-----~~v~~D--vlIDD~~~n~~~~~~~g~~~iLfd~---------------p~Nr~  168 (191)
T PF06941_consen  114 LERHFPFI---PYDNLIFTGDK-----TLVGGD--VLIDDRPHNLEQFANAGIPVILFDQ---------------PYNRD  168 (191)
T ss_dssp             HHHHHTHH---HHCCEEEESSG-----GGC--S--EEEESSSHHHSS-SSESSEEEEE-----------------GGGTT
T ss_pred             HHHHcCCC---chheEEEecCC-----CeEecc--EEecCChHHHHhccCCCceEEEEcC---------------CCCCC
Confidence            44442211   12345555542     123466  6777776655556667776665542               12222


Q ss_pred             CCEEEEeCCHHHHHHhHh
Q 020024          313 SGILYTVSSWAEVHAFIL  330 (332)
Q Consensus       313 ~~~ly~~~~W~~i~~~l~  330 (332)
                      -...++|.+|.||.+++.
T Consensus       169 ~~~~~Rv~~W~ei~~~i~  186 (191)
T PF06941_consen  169 ESNFPRVNNWEEIEDLIL  186 (191)
T ss_dssp             --TSEEE-STTSHHHHHH
T ss_pred             CCCCccCCCHHHHHHHHH
Confidence            225799999999988763

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.35  E-value=0.0088  Score=54.43  Aligned_cols=190  Identities=21%  Similarity=0.239  Sum_probs=104.3

Q ss_pred             eEEEEeCCCCccc--ccchHHHHHHHHHhCCCCCCCCCccccccccccccc-chhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           32 LIIFSDFDLTCTI--VDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELR-NTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        32 ~lvi~DFD~TiT~--~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      .+++||++|||..  ......+.+.+-.                   ++++ .. +.+...+...|.+...+ .|-..  
T Consensus         8 ravtfD~~~tLl~~~~~~~~~y~~i~~~-------------------~gl~~~~-~~~~~~~~~~~~~~~~~-~p~~~--   64 (237)
T KOG3085|consen    8 RAVTFDAGGTLLATLPPVMEVYCEIAEA-------------------YGLEYDD-SLIETIFRKDFKKMSEK-GPFFG--   64 (237)
T ss_pred             EEEEEeCCCceeecCCccHHHHHHHHHH-------------------hCCCCCH-HHHhHhhhHHHHhhccc-CCccc--
Confidence            4999999999984  4445554444422                   2244 33 56666666777653322 22211  


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHH--Hh---------hcCCCChhHHHHHHHHHHcCCCCCcE
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK--AG---------ERLSLQDGCTTFFQKVVKNENLNANV  177 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~--~~---------~~i~lrpg~~e~l~~l~~~g~~~~~~  177 (332)
                        .+.+.+    .++.||...+.....   .++....+...  +.         ....+-+++.++++++|+.|   ..+
T Consensus        65 --~~~g~l----~~~~ww~~lv~~~f~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g---~~l  132 (237)
T KOG3085|consen   65 --LYSGEL----TLSQWWPKLVESTFG---KAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKG---TIL  132 (237)
T ss_pred             --ccCCcc----cHHHHHHHHHHHHhc---cccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCC---eEE
Confidence              111111    134555543333211   12222222111  11         13466778889999999999   899


Q ss_pred             EEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH--HHHHHHHHHhCCCCCceEEEEeCC-
Q 020024          178 HVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV--QAFNNTLEKYGTDRKNLSVYIGDS-  254 (332)
Q Consensus       178 ~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~--~~l~~~~~~~~~~~~~~viyiGDs-  254 (332)
                      .|+| |+ .+-.+..+...|+..        .||--+.+      +.-|..|.  ++.+..+...+.. +.++++|||+ 
T Consensus       133 ~iis-N~-d~r~~~~l~~~~l~~--------~fD~vv~S------~e~g~~KPDp~If~~al~~l~v~-Pee~vhIgD~l  195 (237)
T KOG3085|consen  133 GIIS-NF-DDRLRLLLLPLGLSA--------YFDFVVES------CEVGLEKPDPRIFQLALERLGVK-PEECVHIGDLL  195 (237)
T ss_pred             EEec-CC-cHHHHHHhhccCHHH--------hhhhhhhh------hhhccCCCChHHHHHHHHHhCCC-hHHeEEecCcc
Confidence            9998 54 667776666666421        11111111      11122232  3444445555543 5799999998 


Q ss_pred             ccchHHhhhcCe-eEEEcCC
Q 020024          255 VGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       255 ~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      .||+..++.+|. ++.+.+.
T Consensus       196 ~nD~~gA~~~G~~ailv~~~  215 (237)
T KOG3085|consen  196 ENDYEGARNLGWHAILVDNS  215 (237)
T ss_pred             ccccHhHHHcCCEEEEEccc
Confidence            588999999997 6666644

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.27  E-value=0.00045  Score=64.15  Aligned_cols=48  Identities=31%  Similarity=0.340  Sum_probs=41.8

Q ss_pred             CCCcchHHHHHHHHHHhCCCCC-ceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ..+ .|...++.+.+..+.+ . .+++++|||.||++|++.|+++++|++.
T Consensus       187 ~~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~~vam~NA  235 (273)
T PRK00192        187 GGG-DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADIAVVVPGP  235 (273)
T ss_pred             CCC-CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence            345 7999999998887763 5 7999999999999999999999999975

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=97.24  E-value=0.00037  Score=63.09  Aligned_cols=46  Identities=28%  Similarity=0.338  Sum_probs=38.7

Q ss_pred             CcchHHHHHHHHHHhCCC-CCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          226 PIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      +..|...++.++..++.. ...+++++|||.||++|++.||+||+++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~  225 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG  225 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence            778999999888776542 2347999999999999999999999875

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PLN02382 probable sucrose-phosphatase

Probab=97.22  E-value=0.00061  Score=67.26  Aligned_cols=58  Identities=22%  Similarity=0.234  Sum_probs=46.9

Q ss_pred             CCCCcchHHHHHHHHHHh---CCCCCceEEEEeCCccchHHhhhcC-eeEEEcCC-hhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSVGDLLCLLEAD-IGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~---~~~~~~~viyiGDs~~Dl~~l~~Ad-~gvv~~~~-~~L~~~~~  281 (332)
                      ...+.+|...++.++..+   +.. ..+++++|||.||++|++.++ +||+|++. +.+++.+.
T Consensus       170 ~p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~  232 (413)
T PLN02382        170 LPQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYA  232 (413)
T ss_pred             EeCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHH
Confidence            345667999999998887   553 468999999999999999999 69999865 56766553

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=97.20  E-value=0.0065  Score=56.03  Aligned_cols=111  Identities=11%  Similarity=0.108  Sum_probs=72.1

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh---cCCCcceE-EeeeeEE-----cCceeccc-
Q 020024          149 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS---AGLNALNV-HANEFSF-----KESISTGE-  218 (332)
Q Consensus       149 ~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~---~g~~~~~I-~aN~l~~-----~~g~~tG~-  218 (332)
                      +......+.+.+.++|+.++.+|   ++++.+|+.+ ..+....++.   +|++...- +.++..+     .+...... 
T Consensus        75 ~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~  150 (252)
T PF11019_consen   75 ELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPS  150 (252)
T ss_pred             hhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCce
Confidence            33445678889999999999999   9999999976 6677666544   46532111 1111111     11100000 


Q ss_pred             c-ccc-CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc
Q 020024          219 I-IEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA  264 (332)
Q Consensus       219 ~-~~~-~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A  264 (332)
                      + .|- .+.+.+|...|..++...+. .++.+|||-|+.-.+..+..|
T Consensus       151 ~~~GIlft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a  197 (252)
T PF11019_consen  151 FYDGILFTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA  197 (252)
T ss_pred             eecCeEEeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence            0 021 35677899999999988776 357999999999888766654

The function is not known.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=97.20  E-value=0.0014  Score=60.28  Aligned_cols=50  Identities=28%  Similarity=0.409  Sum_probs=39.6

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++.+.+|..+++-++.+++.+ ..++++.|||-||++||..+..||++++.
T Consensus       160 lP~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~vvV~Na  209 (247)
T PF05116_consen  160 LPKGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHGVVVGNA  209 (247)
T ss_dssp             EETT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEEEE-TTS
T ss_pred             ccCCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCEEEEcCC
Confidence            344556999999999888764 46899999999999999888889999866

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR01684 viral_ppase viral phosphatase

Probab=97.17  E-value=0.0015  Score=61.01  Aligned_cols=43  Identities=14%  Similarity=0.134  Sum_probs=37.3

Q ss_pred             CCCC-hhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc
Q 020024          154 LSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA  200 (332)
Q Consensus       154 i~lr-pg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~  200 (332)
                      ++|| ||+.++++.|+++|   ++++|+|.|- .+.+...|+..|++.
T Consensus       144 v~irdPgV~EaL~~LkekG---ikLaIaTS~~-Re~v~~~L~~lGLd~  187 (301)
T TIGR01684       144 VRIRDPRIYDSLTELKKRG---CILVLWSYGD-RDHVVESMRKVKLDR  187 (301)
T ss_pred             cccCCHHHHHHHHHHHHCC---CEEEEEECCC-HHHHHHHHHHcCCCc
Confidence            3566 88999999999999   9999999884 889999999999853

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.12  E-value=0.0016  Score=59.65  Aligned_cols=60  Identities=18%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhh-cCeeEEEcCC-hhHHHHhHhcC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIGSS-SSLRRVGSQFG  284 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~-Ad~gvv~~~~-~~L~~~~~~~~  284 (332)
                      ..+.+|...++.++..++.+ ..+++++|||.||++|++. ++.+|++++. +.+++.+.++.
T Consensus       163 ~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~  224 (249)
T TIGR01485       163 PQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENA  224 (249)
T ss_pred             eCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcc
Confidence            34567999999998888764 4799999999999999998 6678998865 46666665443

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=97.11  E-value=0.016  Score=52.41  Aligned_cols=104  Identities=13%  Similarity=0.107  Sum_probs=64.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC-C-Cc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG-L-NA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g-~-~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ...+.||+..+++.|+.+|   +++.++|..- ....+..+..++ + ..  ..|.+...++.    .|+..+       
T Consensus        90 ~~~~~PGa~kLv~~L~~~g---ip~alat~s~-~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~----~gKP~P-------  154 (222)
T KOG2914|consen   90 NSILMPGAEKLVNHLKNNG---IPVALATSST-SASFELKISRHEDIFKNFSHVVLGDDPEVK----NGKPDP-------  154 (222)
T ss_pred             ccccCCcHHHHHHHHHhCC---CCeeEEecCC-cccHHHHHHHhhHHHHhcCCCeecCCcccc----CCCCCc-------
Confidence            5789999999999999999   9999999864 445555555543 1 00  11121222222    222211       


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                        .....-....+....++++.+.||.+=+.+...|+.-+++-++
T Consensus       155 --di~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  155 --DIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             --hHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence              1111112222322237899999999999999999987777766

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=97.11  E-value=0.0049  Score=53.81  Aligned_cols=105  Identities=17%  Similarity=0.219  Sum_probs=69.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcc--cc-CHHH-----------HHHHHHhcCCCcceEEeeeeEEcCceecccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSY--CW-CGDL-----------IRASFSSAGLNALNVHANEFSFKESISTGEI  219 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~--g~-s~~~-----------I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~  219 (332)
                      ..+.||..+.+..+++.|   +.++|||-  |. ...|           +...|+..|+....|+...-         ..
T Consensus        30 ~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph---------~p   97 (181)
T COG0241          30 FQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPH---------HP   97 (181)
T ss_pred             hccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCC---------CC
Confidence            568899999999999999   99999995  10 1222           33334444432222222110         01


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      ...|.+.--|...+.+++++++.+ ..+.++|||..+|+.++..+++ |+.+.
T Consensus        98 ~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~  149 (181)
T COG0241          98 EDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVL  149 (181)
T ss_pred             CCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEE
Confidence            112445555778888899888764 4789999999999999999997 44444

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.09  E-value=0.0057  Score=55.55  Aligned_cols=91  Identities=12%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      +.-||+.+|++.++++|   +.+++||+=..  ...-..-|.+.|++..    +.+.+..   .+... ......-|..+
T Consensus       115 ~aip~a~~l~~~~~~~G---~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~l~lr~---~~~~~-~~~~~~yK~~~  183 (229)
T PF03767_consen  115 PAIPGALELYNYARSRG---VKVFFITGRPESQREATEKNLKKAGFPGW----DHLILRP---DKDPS-KKSAVEYKSER  183 (229)
T ss_dssp             EEETTHHHHHHHHHHTT---EEEEEEEEEETTCHHHHHHHHHHHTTSTB----SCGEEEE---ESSTS-S------SHHH
T ss_pred             cccHHHHHHHHHHHHCC---CeEEEEecCCchhHHHHHHHHHHcCCCcc----chhcccc---ccccc-cccccccchHH
Confidence            56788999999999999   99999997421  3333344666676421    1111110   00000 11222347777


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHH
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLC  260 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~  260 (332)
                      .+.+.++    .+.-+.+|||..+|+.-
T Consensus       184 r~~i~~~----Gy~Ii~~iGD~~~D~~~  207 (229)
T PF03767_consen  184 RKEIEKK----GYRIIANIGDQLSDFSG  207 (229)
T ss_dssp             HHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred             HHHHHHc----CCcEEEEeCCCHHHhhc
Confidence            7766653    13456699999999987

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01686 FkbH FkbH-like domain

Probab=97.08  E-value=0.0025  Score=60.68  Aligned_cols=110  Identities=13%  Similarity=0.023  Sum_probs=76.2

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh----cCCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----AGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~----~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      +++|+.++|+.++++|   +.+.|+|.+. ...+..+++.    .++..  ..+.+|            +       ..|
T Consensus        32 ~~~~~~e~L~~L~~~G---i~lai~S~n~-~~~a~~~l~~~~~~~~~~~~f~~~~~~------------~-------~pk   88 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQG---FLLALASKND-EDDAKKVFERRKDFILQAEDFDARSIN------------W-------GPK   88 (320)
T ss_pred             cHHHHHHHHHHHHhCC---CEEEEEcCCC-HHHHHHHHHhCccccCcHHHeeEEEEe------------c-------Cch
Confidence            4889999999999999   9999999995 8899999987    44321  011111            1       248


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHhHhcCCeeeec
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPL  290 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~~~~~~~~~p~  290 (332)
                      ...+++++.+.+.. .+.++||||+..|+.....+.-.|-+.. +..+.+... ..+.|.|.
T Consensus        89 ~~~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l~-~~~~~~~~  148 (320)
T TIGR01686        89 SESLRKIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAILL-FLNELLPL  148 (320)
T ss_pred             HHHHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHhc-ccccccCc
Confidence            88888888887764 4799999999999999988764443333 233433332 23444444

The C-terminal portion of this domain is unique to this family (by BLAST).

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.07  E-value=0.0015  Score=68.11  Aligned_cols=111  Identities=20%  Similarity=0.206  Sum_probs=72.9

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC--CcceEEeee-eEEcC---c---eecccccc-cC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL--NALNVHANE-FSFKE---S---ISTGEIIE-KV  223 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~--~~~~I~aN~-l~~~~---g---~~tG~~~~-~~  223 (332)
                      -+.|||.++-++.|++.|   +.+-.|++.- -.-.+.+..+.|+  +.....|-+ -+|.+   .   ...+++.- --
T Consensus       646 DPvRPgV~~AV~~Cq~AG---ItVRMVTGDN-I~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR  721 (1034)
T KOG0204|consen  646 DPVRPGVPEAVQLCQRAG---ITVRMVTGDN-INTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR  721 (1034)
T ss_pred             CCCCCCcHHHHHHHHHcC---cEEEEEeCCc-HHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeec
Confidence            489999999999999999   9999999853 4455556666675  111111111 11111   0   01111110 12


Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .++.||...++.++..     +.-+..-|||.||-|+|..||+|.+|+=.
T Consensus       722 SSP~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPALkeADVGlAMGIa  766 (1034)
T KOG0204|consen  722 SSPNDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPALKEADVGLAMGIA  766 (1034)
T ss_pred             CCCchHHHHHHHHHhc-----CcEEEEecCCCCCchhhhhcccchhcccc
Confidence            5677999988888742     23455789999999999999999998844

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.02  E-value=0.0024  Score=59.82  Aligned_cols=50  Identities=8%  Similarity=0.091  Sum_probs=39.8

Q ss_pred             CCCC-hhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeee
Q 020024          154 LSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANE  207 (332)
Q Consensus       154 i~lr-pg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~  207 (332)
                      ++|| ||+.++|++|+++|   +++.|+|.| +.+.+...++.+|++..  .|+|+.
T Consensus       146 v~irdp~V~EtL~eLkekG---ikLaIvTNg-~Re~v~~~Le~lgL~~yFDvII~~g  198 (303)
T PHA03398        146 VRIRDPFVYDSLDELKERG---CVLVLWSYG-NREHVVHSLKETKLEGYFDIIICGG  198 (303)
T ss_pred             cccCChhHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHcCCCccccEEEECC
Confidence            3466 88889999999999   999999988 48899999999887532  355543

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.94  E-value=0.0019  Score=55.26  Aligned_cols=85  Identities=16%  Similarity=0.273  Sum_probs=44.3

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEcc--ccCH-----------HHHHHHHHhcCCCcceEEeeeeEEcCceeccccccc
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSY--CWCG-----------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEK  222 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~--g~s~-----------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~  222 (332)
                      +.|++.+.|+.+.+.|   +.++|||-  |.+.           .-|..+++.++++ +.+++-.-   .    ..+ .+
T Consensus        30 ~~~~v~~~L~~l~~~G---y~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip-~~~~~a~~---~----d~~-RK   97 (159)
T PF08645_consen   30 FPPGVPEALRELHKKG---YKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP-IQVYAAPH---K----DPC-RK   97 (159)
T ss_dssp             C-TTHHHHHHHHHHTT---EEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS--EEEEECGC---S----STT-ST
T ss_pred             cchhHHHHHHHHHhcC---CeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc-eEEEecCC---C----CCC-CC
Confidence            3456778888899889   99999993  3322           3345556666665 33333110   0    111 12


Q ss_pred             CCCCcchHHHHHHHHHHhCC---CCCceEEEEeCCccc
Q 020024          223 VESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGD  257 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~---~~~~~viyiGDs~~D  257 (332)
                      +.+     -.+..++..++.   -...+++||||..+|
T Consensus        98 P~~-----GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   98 PNP-----GMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             TSS-----HHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             Cch-----hHHHHHHHhccccccccccceEEEeccCCC
Confidence            222     233334433322   123689999998666

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.91  E-value=0.00078  Score=59.43  Aligned_cols=46  Identities=20%  Similarity=0.260  Sum_probs=39.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ..+.+|...++.++...+.. ..+++++|||.||++|+..++++|+|
T Consensus       159 p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~vam  204 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVAV  204 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceEC
Confidence            35678999999999887753 46899999999999999999998875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=96.89  E-value=0.0089  Score=54.47  Aligned_cols=88  Identities=17%  Similarity=0.260  Sum_probs=57.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHH--HHHHhcCCCc---ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~--~~l~~~g~~~---~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ..+.||+.+++++++++|   .+++|+|.+ +.....  ..|+.+|++.   ..|+++.          .         .
T Consensus        23 ~~~~pga~e~L~~L~~~G---~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~----------~---------~   79 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQG---KPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSG----------E---------I   79 (242)
T ss_pred             CccCccHHHHHHHHHHCC---CEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccH----------H---------H
Confidence            457899999999999999   999999987 355554  6777777642   1222211          0         1


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      -...+.+.+.+.+. ....++++||+..|+..+..++
T Consensus        80 ~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~~~  115 (242)
T TIGR01459        80 AVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQCY  115 (242)
T ss_pred             HHHHHHhhhhhccC-CCceEEEeCCcccchhhhcCCC
Confidence            11344444433332 2357999999999998775433

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=96.79  E-value=0.0016  Score=67.23  Aligned_cols=48  Identities=23%  Similarity=0.137  Sum_probs=40.9

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEE--eCCccchHHhhhcCeeEEEcCC
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYI--GDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyi--GDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .+.+|..+++.++..++.. ..+++.+  |||.||++||+.||+||+|+.+
T Consensus       610 ~gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM~~~  659 (694)
T PRK14502        610 GGNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILVQRP  659 (694)
T ss_pred             CCCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence            4678999999999888763 2566666  9999999999999999999866

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=96.79  E-value=0.1  Score=46.70  Aligned_cols=113  Identities=12%  Similarity=0.186  Sum_probs=73.6

Q ss_pred             CHHHHHHHhh------cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCce
Q 020024          143 NLEDIKKAGE------RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESI  214 (332)
Q Consensus       143 ~~~~l~~~~~------~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~  214 (332)
                      +.++..+++.      .+...+-.++++-.++.+     ...|+|-+. ..-...+|+.+|+..  .-|+|-+       
T Consensus        82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r-----~k~~FTNa~-k~HA~r~Lk~LGieDcFegii~~e-------  148 (244)
T KOG3109|consen   82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKR-----RKWIFTNAY-KVHAIRILKKLGIEDCFEGIICFE-------  148 (244)
T ss_pred             CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCccc-----cEEEecCCc-HHHHHHHHHHhChHHhccceeEee-------
Confidence            3566666553      344555568888888853     277889886 778888899999742  2344422       


Q ss_pred             ecccccccCCCCcchH--HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          215 STGEIIEKVESPIDKV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       215 ~tG~~~~~~~~~~~K~--~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                         ...+.-.+-.||.  .+.+......+..++.+++|+-||.+-+...+..|.. ++++
T Consensus       149 ---~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~  205 (244)
T KOG3109|consen  149 ---TLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVG  205 (244)
T ss_pred             ---ccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence               1111111222442  5566666666776678999999999999999999984 4444

>TIGR01675 plant-AP plant acid phosphatase

Probab=96.79  E-value=0.027  Score=51.10  Aligned_cols=91  Identities=18%  Similarity=0.235  Sum_probs=55.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH---HHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~---I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ..+.-|++.+|++.++++|   +.++++|+=. ...   ....|..+|++..    ..|...+.   +. . ......-|
T Consensus       118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR~-e~~r~~T~~nL~~~G~~~~----~~LiLR~~---~d-~-~~~~~~yK  184 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELG---IKIFLLSGRW-EELRNATLDNLINAGFTGW----KHLILRGL---ED-S-NKTVVTYK  184 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHHHHHcCCCCc----CeeeecCC---CC-C-CchHhHHH
Confidence            4577899999999999999   9999999852 333   5566777787531    22222210   00 0 00111126


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHH
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC  260 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~  260 (332)
                      ..+.+++.++    .+.-+..+||-.+|+.-
T Consensus       185 s~~R~~l~~~----GYrIv~~iGDq~sDl~G  211 (229)
T TIGR01675       185 SEVRKSLMEE----GYRIWGNIGDQWSDLLG  211 (229)
T ss_pred             HHHHHHHHhC----CceEEEEECCChHHhcC
Confidence            6666666542    23345589999999943

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=96.53  E-value=0.0026  Score=59.02  Aligned_cols=49  Identities=16%  Similarity=0.274  Sum_probs=42.0

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc----CeeEEEcCCh
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSSS  274 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A----d~gvv~~~~~  274 (332)
                      .+.+|...+++++...+.. .+.++|+||+.||..|+..+    +++|.|+...
T Consensus       171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~  223 (266)
T PRK10187        171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA  223 (266)
T ss_pred             CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence            3668999999999887753 46899999999999999999    8899998653

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=96.32  E-value=0.003  Score=54.19  Aligned_cols=92  Identities=13%  Similarity=0.151  Sum_probs=57.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC-ceec-ccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SIST-GEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~t-G~~~~~~~~~~~K~  230 (332)
                      .+..|||+.+|++.+.+.    ++++|.|++- ..+++.+++.++... ..+...+ +.+ ...+ |.+        -|.
T Consensus        40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~~-~~yA~~il~~ldp~~-~~f~~~l-~r~~~~~~~~~~--------~K~  104 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW----YELVIFTASL-EEYADPVLDILDRGG-KVISRRL-YRESCVFTNGKY--------VKD  104 (162)
T ss_pred             EEEECCCHHHHHHHHHhc----CEEEEEcCCc-HHHHHHHHHHHCcCC-CEEeEEE-EccccEEeCCCE--------EeE
Confidence            368999999999999864    8999999994 999999998876421 1222221 111 1111 111        111


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                        |.    ..+. ...++|+|||+..|+.+...+++
T Consensus       105 --L~----~l~~-~~~~vIiVDD~~~~~~~~~~NgI  133 (162)
T TIGR02251       105 --LS----LVGK-DLSKVIIIDNSPYSYSLQPDNAI  133 (162)
T ss_pred             --ch----hcCC-ChhhEEEEeCChhhhccCccCEe
Confidence              11    1121 23689999999998866655543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PTZ00174 phosphomannomutase; Provisional

Probab=96.29  E-value=0.0043  Score=56.81  Aligned_cols=54  Identities=9%  Similarity=0.098  Sum_probs=40.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeC----CccchHHhhhc---CeeEEEcCChhHHHHhHh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEA---DIGIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~A---d~gvv~~~~~~L~~~~~~  282 (332)
                      ...+.+|...|+.++..     .++++++||    +.||++|++.|   +++|. ++.+.++.+|+-
T Consensus       183 ~~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~  243 (247)
T PTZ00174        183 FPKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKEL  243 (247)
T ss_pred             eeCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHH
Confidence            44567899999988875     268999999    89999999954   44444 445667766654

>PLN02423 phosphomannomutase

Probab=95.82  E-value=0.016  Score=53.17  Aligned_cols=55  Identities=15%  Similarity=0.080  Sum_probs=45.6

Q ss_pred             cCCCCcchHHHHHHHHHHhCCCCCceEEEEeC----CccchHHhhhcCe-eEEEcCChhHHHHhHh
Q 020024          222 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       222 ~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-gvv~~~~~~L~~~~~~  282 (332)
                      -...+.+|...|+.++      ..++++++||    +.||++||+..++ ++.+.+.+.+...|.+
T Consensus       183 i~~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~  242 (245)
T PLN02423        183 VFPQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA  242 (245)
T ss_pred             EeeCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence            3455778999999988      1379999999    8999999998555 8889988888888875

>TIGR00685 T6PP trehalose-phosphatase

Probab=95.63  E-value=0.038  Score=50.44  Aligned_cols=39  Identities=18%  Similarity=0.147  Sum_probs=33.4

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA  264 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A  264 (332)
                      .+.+|...++.++...+.. ...++|+||+.||..|+..+
T Consensus       164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~  202 (244)
T TIGR00685       164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV  202 (244)
T ss_pred             CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence            3668999999999887653 36899999999999999998

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=95.51  E-value=0.023  Score=58.38  Aligned_cols=100  Identities=15%  Similarity=0.181  Sum_probs=61.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      +.=|.++..-+..+|.++   ....|+++. |-+|--...+.. +  .++.|-        ++ ...+.-|++..|.++.
T Consensus       710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~E-f--~el~~~--------~~-aVv~CRctPtQKA~v~  773 (1051)
T KOG0210|consen  710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDE-F--IELVCE--------LP-AVVCCRCTPTQKAQVV  773 (1051)
T ss_pred             cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHH-H--HHHHHh--------cC-cEEEEecChhHHHHHH
Confidence            455777888888888776   677778763 222222211110 0  111110        00 0111235667799888


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +-+.+..+    ..+.+||||-||.-|++.||+||-+-++
T Consensus       774 ~llq~~t~----krvc~IGDGGNDVsMIq~A~~GiGI~gk  809 (1051)
T KOG0210|consen  774 RLLQKKTG----KRVCAIGDGGNDVSMIQAADVGIGIVGK  809 (1051)
T ss_pred             HHHHHhhC----ceEEEEcCCCccchheeecccceeeecc
Confidence            86665532    6899999999999999999887766544

>COG4996 Predicted phosphatase [General function prediction only]

Probab=95.42  E-value=0.083  Score=43.54  Aligned_cols=44  Identities=11%  Similarity=0.122  Sum_probs=30.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL  198 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~  198 (332)
                      +..+.|+|.++++++|++..|   +-+...|=|+ .+-.-.+|+.+++
T Consensus        37 G~ev~L~~~v~~~l~warnsG---~i~~~~sWN~-~~kA~~aLral~~   80 (164)
T COG4996          37 GREVHLFPDVKETLKWARNSG---YILGLASWNF-EDKAIKALRALDL   80 (164)
T ss_pred             CeEEEEcHHHHHHHHHHHhCC---cEEEEeecCc-hHHHHHHHHHhch
Confidence            346899999999999999988   6555554443 3334445666665

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=95.27  E-value=0.18  Score=55.33  Aligned_cols=63  Identities=25%  Similarity=0.369  Sum_probs=45.1

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh----------------hHHHHhHhcC-Ceee
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS----------------SLRRVGSQFG-VTFI  288 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~----------------~L~~~~~~~~-~~~~  288 (332)
                      +..|..+++-.+..    ....+.+||||.||..|++.||+||.+...+                .|.++..-+| |.+.
T Consensus       779 PlQKA~Vv~lVk~~----~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~  854 (1151)
T KOG0206|consen  779 PLQKALVVKLVKKG----LKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYI  854 (1151)
T ss_pred             HHHHHHHHHHHHhc----CCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHH
Confidence            45677777765332    1357899999999999999999999888663                4555555566 6666


Q ss_pred             ecCc
Q 020024          289 PLYP  292 (332)
Q Consensus       289 p~~~  292 (332)
                      .++.
T Consensus       855 R~a~  858 (1151)
T KOG0206|consen  855 RLAK  858 (1151)
T ss_pred             HHHH
Confidence            5554

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=95.27  E-value=0.3  Score=45.40  Aligned_cols=91  Identities=18%  Similarity=0.149  Sum_probs=51.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      .+--||+.+|++.++++|   +.+++||+=-.  ...-..-|.+.|++.   . ..|...+.   +.- .......-|..
T Consensus       144 ApAlp~al~ly~~l~~~G---~kIf~VSgR~e~~r~aT~~NL~kaGy~~---~-~~LiLR~~---~D~-~~~~av~yKs~  212 (275)
T TIGR01680       144 APALPETLKNYNKLVSLG---FKIIFLSGRLKDKQAVTEANLKKAGYHT---W-EKLILKDP---QDN-SAENAVEYKTA  212 (275)
T ss_pred             CCCChHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHHcCCCC---c-ceeeecCC---CCC-ccchhHHHHHH
Confidence            456679999999999999   99999997420  223334456667642   1 22222210   000 00111123555


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchH
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLL  259 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~  259 (332)
                      ..+++.++    .+.-+..+||-.+|+.
T Consensus       213 ~R~~li~e----GYrIv~~iGDq~sDl~  236 (275)
T TIGR01680       213 ARAKLIQE----GYNIVGIIGDQWNDLK  236 (275)
T ss_pred             HHHHHHHc----CceEEEEECCCHHhcc
Confidence            44554432    2344558999999994

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=95.21  E-value=0.17  Score=46.00  Aligned_cols=126  Identities=17%  Similarity=0.176  Sum_probs=74.1

Q ss_pred             CCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH----HHHHHHhcCCCcceEEeeeeEEcCce
Q 020024          141 GINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL----IRASFSSAGLNALNVHANEFSFKESI  214 (332)
Q Consensus       141 G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~----I~~~l~~~g~~~~~I~aN~l~~~~g~  214 (332)
                      |.+.+....+++  ....-||+.||++...++|   ..++-||.- ..+-    -..-|.+.|++...  =-.+.+.   
T Consensus       106 ~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~G---g~ifyiSNR-~~~~~~~~T~~nLk~~g~~~~~--~~~~llk---  176 (274)
T COG2503         106 GFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNG---GKIFYISNR-DQENEKDGTIENLKSEGLPQVL--ESHLLLK---  176 (274)
T ss_pred             CCCccchHHHHhhcccccCccHHHHHHHHHhcC---cEEEEEecc-chhcccchhHHHHHHcCccccc--ccceEEe---
Confidence            345555555543  3567799999999999999   899999963 2222    22234455664210  0001110   


Q ss_pred             ecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCeeeecC
Q 020024          215 STGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY  291 (332)
Q Consensus       215 ~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~  291 (332)
                               .....|..+.+.....     +..|.+|||...|+.-....+-  ---....+.+..+.+|-.|+=+-
T Consensus       177 ---------k~~k~Ke~R~~~v~k~-----~~iVm~vGDNl~DF~d~~~k~~--~~eR~Alv~~~~~~FGk~~Ii~p  237 (274)
T COG2503         177 ---------KDKKSKEVRRQAVEKD-----YKIVMLVGDNLDDFGDNAYKKA--EAERRALVKQNQKKFGKKFIILP  237 (274)
T ss_pred             ---------eCCCcHHHHHHHHhhc-----cceeeEecCchhhhcchhhhhh--hHHHHHHHHHHHHHhCceEEEec
Confidence                     1112366666655442     3568899999999976655541  11112357777888887776443

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=94.91  E-value=0.49  Score=43.31  Aligned_cols=35  Identities=9%  Similarity=0.039  Sum_probs=27.6

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA  200 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~  200 (332)
                      +.|++++++|   ++++|+|+. +-..+...++.++++.
T Consensus        27 ~al~~~~~~g---~~v~iaTGR-~~~~~~~~~~~l~~~~   61 (264)
T COG0561          27 EALARLREKG---VKVVLATGR-PLPDVLSILEELGLDG   61 (264)
T ss_pred             HHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCc
Confidence            4566778888   999999987 4678888888888753

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.83  E-value=0.14  Score=47.41  Aligned_cols=34  Identities=12%  Similarity=0.135  Sum_probs=26.3

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|++++++|   ++++|.|+- +...+.+.++.+|++
T Consensus        31 ~ai~~l~~~G---i~~viaTGR-~~~~i~~~~~~l~~~   64 (271)
T PRK03669         31 PWLTRLREAQ---VPVILCSSK-TAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHcC---CeEEEEcCC-CHHHHHHHHHHhCCC
Confidence            3456678888   999999987 477788888888874

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=94.82  E-value=0.13  Score=54.14  Aligned_cols=112  Identities=10%  Similarity=0.078  Sum_probs=65.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC-c-c-------eEEeeeeEEc--Cceecccccc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN-A-L-------NVHANEFSFK--ESISTGEIIE  221 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~-~-~-------~I~aN~l~~~--~g~~tG~~~~  221 (332)
                      +.+++|..++.|+.+...+   ++++.|++- +.--..++.+..|+- . .       .--.|++.+.  ||...-.+.+
T Consensus       673 ~CPlK~Ds~~~I~el~~SS---H~vvMITGD-npLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p  748 (1160)
T KOG0209|consen  673 SCPLKPDSKKTIKELNNSS---HRVVMITGD-NPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKP  748 (1160)
T ss_pred             eCCCCccHHHHHHHHhccC---ceEEEEeCC-CccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCC
Confidence            5899999999999999877   999999974 233334444444431 0 0       0122344442  1211100000


Q ss_pred             ------------cCCCC---------------------------cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhh
Q 020024          222 ------------KVESP---------------------------IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL  262 (332)
Q Consensus       222 ------------~~~~~---------------------------~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~  262 (332)
                                  -|.+|                           ..|...+..+..     .+..+...|||.||.-+|+
T Consensus       749 ~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK  823 (1160)
T KOG0209|consen  749 GKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKK-----LGYVTLMCGDGTNDVGALK  823 (1160)
T ss_pred             CccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHh-----cCeEEEEecCCCcchhhhh
Confidence                        01111                           123333332221     2467899999999999999


Q ss_pred             hcCeeEEEcCC
Q 020024          263 EADIGIVIGSS  273 (332)
Q Consensus       263 ~Ad~gvv~~~~  273 (332)
                      +|++||+.-.+
T Consensus       824 ~AhVGVALL~~  834 (1160)
T KOG0209|consen  824 QAHVGVALLNN  834 (1160)
T ss_pred             hcccceehhcC
Confidence            99999987655

>PLN02580 trehalose-phosphatase

Probab=94.68  E-value=0.1  Score=50.92  Aligned_cols=48  Identities=27%  Similarity=0.313  Sum_probs=37.6

Q ss_pred             CCcchHHHHHHHHHHhCCCCCce--EEEEeCCccchHHhhh-----cCeeEEEcC
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNL--SVYIGDSVGDLLCLLE-----ADIGIVIGS  272 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~--viyiGDs~~Dl~~l~~-----Ad~gvv~~~  272 (332)
                      .+.+|...++.++...+....+.  .+|+||+.||..|++.     +++||+++.
T Consensus       298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn  352 (384)
T PLN02580        298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS  352 (384)
T ss_pred             CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence            36789999999998876532222  4899999999999996     477887774

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=94.23  E-value=0.17  Score=45.06  Aligned_cols=34  Identities=9%  Similarity=0.100  Sum_probs=27.3

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|+.++++|   ++++|+|+. +...+..+++.++++
T Consensus        23 ~~l~~l~~~g---i~~~i~TgR-~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        23 PWLTRLQEAG---IPVILCTSK-TAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCC
Confidence            3556677778   999999998 488899999888764

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=94.09  E-value=0.72  Score=42.18  Aligned_cols=43  Identities=9%  Similarity=0.073  Sum_probs=29.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeee
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF  208 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l  208 (332)
                      +.|+.++++|   +.++|.|+-. ...+...++.++++..-|.+|-.
T Consensus        27 ~ai~~~~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~~~~I~~NGa   69 (272)
T PRK10530         27 EALARAREAG---YKVIIVTGRH-HVAIHPFYQALALDTPAICCNGT   69 (272)
T ss_pred             HHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHhcCCCCCEEEcCCc
Confidence            3456678888   9999999863 66677788887764323445543

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=94.06  E-value=0.24  Score=44.22  Aligned_cols=41  Identities=17%  Similarity=0.016  Sum_probs=27.3

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEee
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAN  206 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN  206 (332)
                      +.|+.++++|   ++++|.|+- +...+.+.+..++++..-|.+|
T Consensus        27 ~al~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~~~~i~~n   67 (230)
T PRK01158         27 EAIRKAEKLG---IPVILATGN-VLCFARAAAKLIGTSGPVIAEN   67 (230)
T ss_pred             HHHHHHHHCC---CEEEEEcCC-chHHHHHHHHHhCCCCcEEEec
Confidence            3455677778   999999986 3666777777777643233344

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=94.05  E-value=0.67  Score=42.65  Aligned_cols=43  Identities=7%  Similarity=0.046  Sum_probs=29.5

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeee
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF  208 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l  208 (332)
                      +.|++++++|   +.++|.|+- +...+...++.++++..-|.+|-.
T Consensus        26 ~ai~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~~~~I~~NGa   68 (272)
T PRK15126         26 STLARLRERD---ITLTFATGR-HVLEMQHILGALSLDAYLITGNGT   68 (272)
T ss_pred             HHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCCCcEEecCCc
Confidence            3466678888   999999986 466778888887765323445543

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=94.03  E-value=0.12  Score=54.50  Aligned_cols=25  Identities=40%  Similarity=0.662  Sum_probs=22.4

Q ss_pred             eEEEEeCCccchHHhhhcCeeEEEc
Q 020024          247 LSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       247 ~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      -|-..|||.||-|+|+.||+||+++
T Consensus       707 iVaVTGDGVNDsPALKKADIGVAMG  731 (1019)
T KOG0203|consen  707 IVAVTGDGVNDSPALKKADIGVAMG  731 (1019)
T ss_pred             EEEEeCCCcCCChhhcccccceeec
Confidence            3447899999999999999999996

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=93.93  E-value=0.28  Score=42.61  Aligned_cols=83  Identities=13%  Similarity=0.140  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEccccCHH---HHHHHHHh-cCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHH
Q 020024          160 CTTFFQKVVKNENLNANVHVLSYCWCGD---LIRASFSS-AGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN  235 (332)
Q Consensus       160 ~~e~l~~l~~~g~~~~~~~IvS~g~s~~---~I~~~l~~-~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~  235 (332)
                      ++.+|+.++++|   ..++.|++- +.-   -+...|++ +.+.+    -|.+.|.+.+       +-....+|...++.
T Consensus       119 A~qLI~MHq~RG---D~i~FvTGR-t~gk~d~vsk~Lak~F~i~~----m~pv~f~Gdk-------~k~~qy~Kt~~i~~  183 (237)
T COG3700         119 ARQLIDMHQRRG---DAIYFVTGR-TPGKTDTVSKTLAKNFHITN----MNPVIFAGDK-------PKPGQYTKTQWIQD  183 (237)
T ss_pred             HHHHHHHHHhcC---CeEEEEecC-CCCcccccchhHHhhcccCC----CcceeeccCC-------CCcccccccHHHHh
Confidence            567999999999   999999974 222   12222322 11111    1222332221       11233457655542


Q ss_pred             HHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          236 TLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       236 ~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                          .     ..-|.||||-+|+.+++.|+.
T Consensus       184 ----~-----~~~IhYGDSD~Di~AAkeaG~  205 (237)
T COG3700         184 ----K-----NIRIHYGDSDNDITAAKEAGA  205 (237)
T ss_pred             ----c-----CceEEecCCchhhhHHHhcCc
Confidence                1     356899999999999999986

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.90  E-value=0.26  Score=45.57  Aligned_cols=42  Identities=10%  Similarity=-0.026  Sum_probs=30.5

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeee
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE  207 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~  207 (332)
                      +.|+.++++|   ++++|+|+.. ...+...++.+|+....|..|-
T Consensus        28 ~ai~~l~~~G---i~~~iaTgR~-~~~~~~~~~~l~l~~~~i~~nG   69 (273)
T PRK00192         28 PALKALKEKG---IPVIPCTSKT-AAEVEVLRKELGLEDPFIVENG   69 (273)
T ss_pred             HHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCCCCEEEEcC
Confidence            4566778888   9999999874 6778888888887533444444

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=93.70  E-value=0.17  Score=37.18  Aligned_cols=42  Identities=26%  Similarity=0.401  Sum_probs=32.0

Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ..+...+...+.. ..++++|||+ .+|+.+...+++ +|.+..+
T Consensus         8 ~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG   51 (75)
T PF13242_consen    8 GMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTG   51 (75)
T ss_dssp             HHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred             HHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence            4555566666553 4789999999 999999999998 5666644

...

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=93.12  E-value=1.3  Score=40.62  Aligned_cols=34  Identities=6%  Similarity=-0.117  Sum_probs=25.7

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|++++++|   +.++|.|+-. ..-+...++.++++
T Consensus        27 ~ai~~l~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~   60 (270)
T PRK10513         27 QAIAAARAKG---VNVVLTTGRP-YAGVHRYLKELHME   60 (270)
T ss_pred             HHHHHHHHCC---CEEEEecCCC-hHHHHHHHHHhCCC
Confidence            4466778888   9999999863 66777788877764

>PRK10976 putative hydrolase; Provisional

Probab=93.04  E-value=0.43  Score=43.69  Aligned_cols=34  Identities=0%  Similarity=-0.164  Sum_probs=24.0

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|++++++|   +.++|.|+- +...+...++.++++
T Consensus        26 ~ai~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~   59 (266)
T PRK10976         26 ETLKLLTARG---IHFVFATGR-HHVDVGQIRDNLEIK   59 (266)
T ss_pred             HHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHhcCCC
Confidence            3456677778   899999876 355667777777764

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=93.03  E-value=0.36  Score=42.33  Aligned_cols=30  Identities=7%  Similarity=0.053  Sum_probs=22.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS  195 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~  195 (332)
                      +.|+.++++|   +.++|+|+. +...+...+..
T Consensus        24 ~~l~~l~~~g---~~~~i~TGR-~~~~~~~~~~~   53 (204)
T TIGR01484        24 EALERLREAG---VKVVLVTGR-SLAEIKELLKQ   53 (204)
T ss_pred             HHHHHHHHCC---CEEEEECCC-CHHHHHHHHHh
Confidence            4566677777   899999987 47777777765

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=92.84  E-value=0.09  Score=47.16  Aligned_cols=43  Identities=28%  Similarity=0.230  Sum_probs=29.8

Q ss_pred             hHHHHHHHHHHhCCCCCc-eEEEEeCCccchHHhhhcCeeEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKN-LSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~-~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      |-++.+-++..+...... .++.+|||.||+|+++..|.++++.
T Consensus       192 Kg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~  235 (274)
T COG3769         192 KGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVK  235 (274)
T ss_pred             ccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeec
Confidence            444444444332221223 4889999999999999999988887

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=92.62  E-value=0.9  Score=43.78  Aligned_cols=112  Identities=20%  Similarity=0.193  Sum_probs=67.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-C-------CCc--ceEE--eeeeEE-cCce-----
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-G-------LNA--LNVH--ANEFSF-KESI-----  214 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g-------~~~--~~I~--aN~l~~-~~g~-----  214 (332)
                      -+...||+.++|+.++++|   .++.|+|.+- ..+++.+++.+ |       +..  ..|+  |+...| .++.     
T Consensus       182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS~-~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v  257 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNSD-YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV  257 (343)
T ss_pred             HhccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence            3677999999999999999   9999999984 88999888875 4       211  1233  222222 2111     


Q ss_pred             --ecccc--------cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhh-hcCe-eEEEcC
Q 020024          215 --STGEI--------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLL-EADI-GIVIGS  272 (332)
Q Consensus       215 --~tG~~--------~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~-~Ad~-gvv~~~  272 (332)
                        .+|..        .+.-....+-...+.+.+.   . ...+++||||.. +|+.... .++. .+.+.+
T Consensus       258 ~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~---~-~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       258 DVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLK---W-RGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             eCCCCcccCCccccccCCCeEeCCCHHHHHHHHC---C-CCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence              11211        1111111233344444443   2 247899999974 7888777 6776 455554

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=92.55  E-value=0.11  Score=55.00  Aligned_cols=48  Identities=21%  Similarity=0.248  Sum_probs=37.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc---CeeEEEcCCh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA---DIGIVIGSSS  274 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A---d~gvv~~~~~  274 (332)
                      ..+.+|...++.+++..   ..+.++++||+.||.+|++.+   +++|.++..+
T Consensus       653 p~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~  703 (726)
T PRK14501        653 PAGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE  703 (726)
T ss_pred             ECCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence            33567999999988732   246899999999999999986   5688887653

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=92.19  E-value=0.82  Score=39.34  Aligned_cols=88  Identities=15%  Similarity=0.162  Sum_probs=63.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .....|...+.+..++.+|   +.++|+|-+ +..=+..+++++|++.  |+.          .++   +.      ...
T Consensus        44 ~~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~f--i~~----------A~K---P~------~~~   98 (175)
T COG2179          44 NPDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPF--IYR----------AKK---PF------GRA   98 (175)
T ss_pred             CCCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCce--eec----------ccC---cc------HHH
Confidence            3567788889999999999   999999976 6888888888887631  111          011   11      134


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI  266 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~  266 (332)
                      +++.+.+.+.+ .++++.|||.. ||+.....+++
T Consensus        99 fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~  132 (175)
T COG2179          99 FRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGM  132 (175)
T ss_pred             HHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCc
Confidence            45555556653 47999999995 99998888887

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=91.83  E-value=0.22  Score=45.23  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCeeE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGI  268 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gv  268 (332)
                      ...++..+.+.+.....++++|||+ .+|+.+...+++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~  237 (242)
T TIGR01459       198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT  237 (242)
T ss_pred             HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence            3455555655553223589999999 69999999999743

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02588 glycerol-3-phosphate acyltransferase

Probab=91.71  E-value=1.9  Score=43.48  Aligned_cols=126  Identities=12%  Similarity=0.004  Sum_probs=79.0

Q ss_pred             HhhhcCCCCHHHHHHHhhcC--CC-Chh-HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEE
Q 020024          135 ESGVLKGINLEDIKKAGERL--SL-QDG-CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF  210 (332)
Q Consensus       135 ~~~~f~G~~~~~l~~~~~~i--~l-rpg-~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~  210 (332)
                      -.-.|.|+.+++++ .++.+  ++ -++ -.|-++-.+..+    .-++||+.- .-+++++++.+ +..+.|++.|++.
T Consensus       107 ~~v~f~Gl~~~~~~-v~ravLPkf~~~dv~~e~~~v~~~~~----~~~vv~~~P-rvMve~Flkey-l~~d~V~g~El~~  179 (525)
T PLN02588        107 VMLSFFGVKKESFR-AGKAVLPKYFLEDVGLEMFQVLKRGG----KRVGVSDLP-QVMIDVFLRDY-LEIEVVVGRDMKM  179 (525)
T ss_pred             HHHhhcCCcHHHhh-hHHhhccHHHHhhcCHHHHHHHhhcC----cEEEEecCC-HHHHHHHHHHh-cCcceEeeeeEEE
Confidence            35668899988776 44421  11 111 234444444444    566777764 88899999765 2336899999999


Q ss_pred             cCceecccccccCCCCcchHHHHHH-HHHHhCCCCCceEEEEeCC---ccchHHhhhcCeeEEEcCC
Q 020024          211 KESISTGEIIEKVESPIDKVQAFNN-TLEKYGTDRKNLSVYIGDS---VGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       211 ~~g~~tG~~~~~~~~~~~K~~~l~~-~~~~~~~~~~~~viyiGDs---~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ..|.+||-..     +.+|.....+ +.... .......+-+||+   .+|...+..+..+.++.+.
T Consensus       180 ~~g~~tG~~~-----~~~~~~~~~~~~~~~~-~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~~  240 (525)
T PLN02588        180 VGGYYLGIME-----DKKKHELAFDKVVQEE-RLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRNS  240 (525)
T ss_pred             eeeEEEEEEc-----ccchHHHHHHHHhccc-CcccccceeecccCcccccchhHHhCcceEEeChh
Confidence            8899999665     3456655444 33211 0012348899998   7888888777766666654

>PLN02645 phosphoglycolate phosphatase

Probab=91.26  E-value=1.2  Score=42.17  Aligned_cols=87  Identities=21%  Similarity=0.171  Sum_probs=50.5

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .+.||+.++|+.++++|   .+++++|.+-  +..-+..-|+.+|++.        . .+.+++..            ..
T Consensus        44 ~~~~ga~e~l~~lr~~g---~~~~~~TN~~~~~~~~~~~~l~~lGi~~--------~-~~~I~ts~------------~~   99 (311)
T PLN02645         44 KLIEGVPETLDMLRSMG---KKLVFVTNNSTKSRAQYGKKFESLGLNV--------T-EEEIFSSS------------FA   99 (311)
T ss_pred             ccCcCHHHHHHHHHHCC---CEEEEEeCCCCCCHHHHHHHHHHCCCCC--------C-hhhEeehH------------HH
Confidence            35699999999999999   9999999862  1222233345566521        0 01122211            12


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      +..++...+.. ....+|++++.+|...++.+++
T Consensus       100 ~~~~l~~~~~~-~~~~V~viG~~~~~~~l~~~Gi  132 (311)
T PLN02645        100 AAAYLKSINFP-KDKKVYVIGEEGILEELELAGF  132 (311)
T ss_pred             HHHHHHhhccC-CCCEEEEEcCHHHHHHHHHCCC
Confidence            23333322211 1235888888888888887775

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=90.66  E-value=1.2  Score=46.60  Aligned_cols=41  Identities=10%  Similarity=-0.057  Sum_probs=27.9

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeee
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE  207 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~  207 (332)
                      .|+.++++|   ++++|.|+- +...+...++.++++..-|.+|-
T Consensus       441 AL~~L~ekG---I~~VIATGR-s~~~i~~l~~~Lgl~~~~I~eNG  481 (694)
T PRK14502        441 ALRLLKDKE---LPLVFCSAK-TMGEQDLYRNELGIKDPFITENG  481 (694)
T ss_pred             HHHHHHHcC---CeEEEEeCC-CHHHHHHHHHHcCCCCeEEEcCC
Confidence            355667778   999999987 47778888887776422334443

>PTZ00445 p36-lilke protein; Provisional

Probab=90.55  E-value=1.8  Score=38.83  Aligned_cols=111  Identities=12%  Similarity=0.216  Sum_probs=72.4

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHH----------------HHHHHHHhcCC--CcceEEeeeeE-EcC-ce
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD----------------LIRASFSSAGL--NALNVHANEFS-FKE-SI  214 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~----------------~I~~~l~~~g~--~~~~I~aN~l~-~~~-g~  214 (332)
                      .++|.++.++..+++.|   ++++|||-+  +.                +|+..|+.-+.  ....++|=-.. ++. ..
T Consensus        75 ~~tpefk~~~~~l~~~~---I~v~VVTfS--d~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~  149 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSN---IKISVVTFS--DKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSD  149 (219)
T ss_pred             cCCHHHHHHHHHHHHCC---CeEEEEEcc--chhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhh
Confidence            36889999999999998   999999863  33                77777764332  11234432111 111 11


Q ss_pred             ecc-cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          215 STG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       215 ~tG-~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      |.. ...  -+....|.-.+++++.+.+.. +++++||=|+..-+.++...|+ ++.+.+.
T Consensus       150 y~~~gl~--KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        150 YRPLGLD--APMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             hhhhccc--CCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence            110 000  122334667789999988874 5899999999999999999997 5555543

>PLN02887 hydrolase family protein

Probab=89.72  E-value=4.6  Score=41.81  Aligned_cols=33  Identities=6%  Similarity=0.043  Sum_probs=24.8

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL  198 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~  198 (332)
                      +.|+.++++|   +.++|.|+- +..-+...++.+++
T Consensus       332 eAI~kl~ekG---i~~vIATGR-~~~~i~~~l~~L~l  364 (580)
T PLN02887        332 KALKEALSRG---VKVVIATGK-ARPAVIDILKMVDL  364 (580)
T ss_pred             HHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHhCc
Confidence            4466778888   999999986 36667777777665

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=89.49  E-value=0.76  Score=41.82  Aligned_cols=15  Identities=40%  Similarity=0.450  Sum_probs=12.9

Q ss_pred             ceEEEEeCCCCcccc
Q 020024           31 RLIIFSDFDLTCTIV   45 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~   45 (332)
                      +++|++|+||||++.
T Consensus         1 ~~li~tDlDGTLl~~   15 (249)
T TIGR01485         1 RLLLVSDLDNTLVDH   15 (249)
T ss_pred             CeEEEEcCCCcCcCC
Confidence            468999999999974

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=89.24  E-value=0.25  Score=48.47  Aligned_cols=38  Identities=18%  Similarity=0.155  Sum_probs=26.2

Q ss_pred             cccccccccCCCCCCceEEEEeCCCCcccccchHHHHHH
Q 020024           16 PTVVPLIKGHNPAGDRLIIFSDFDLTCTIVDSSAILAEI   54 (332)
Q Consensus        16 ~~~~~~~~~~~~~~~~~lvi~DFD~TiT~~Dt~~~l~~~   54 (332)
                      .+++-+-... ++..+.+||+|.|||||+.|...-+-.+
T Consensus       361 ~a~~t~~ifv-wr~n~kiVVsDiDGTITkSD~~Ghv~~m  398 (580)
T COG5083         361 KAIATMYIFV-WRNNKKIVVSDIDGTITKSDALGHVKQM  398 (580)
T ss_pred             ccEEEEEEEE-EeCCCcEEEEecCCcEEehhhHHHHHHH
Confidence            3444444443 4456779999999999999987555444

>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function

Probab=88.86  E-value=2.1  Score=33.69  Aligned_cols=74  Identities=16%  Similarity=0.177  Sum_probs=44.3

Q ss_pred             cEEEEccc---cCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEe
Q 020024          176 NVHVLSYC---WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIG  252 (332)
Q Consensus       176 ~~~IvS~g---~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiG  252 (332)
                      |+.=||++   . ..++..+++.+|++.-.++-.++   ++..++-+..  ....-|...+++++..+.   ..+.|+||
T Consensus         1 pf~YvS~SPwnl-y~~l~~Fl~~~~~P~G~~~Lr~~---~~~~~~~~~~--~~~~~K~~~i~~i~~~fP---~~kfiLIG   71 (100)
T PF09949_consen    1 PFFYVSNSPWNL-YPFLRDFLRRNGFPAGPLLLRDY---GPSLSGLFKS--GAEEHKRDNIERILRDFP---ERKFILIG   71 (100)
T ss_pred             CEEEEcCCHHHH-HHHHHHHHHhcCCCCCceEcccC---CccccccccC--CchhHHHHHHHHHHHHCC---CCcEEEEe
Confidence            34556763   2 45677777777776545555444   1222222211  111479999999998764   36899999


Q ss_pred             CCc-cch
Q 020024          253 DSV-GDL  258 (332)
Q Consensus       253 Ds~-~Dl  258 (332)
                      ||- .|.
T Consensus        72 Dsgq~Dp   78 (100)
T PF09949_consen   72 DSGQHDP   78 (100)
T ss_pred             eCCCcCH
Confidence            985 453

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=87.48  E-value=3.3  Score=36.66  Aligned_cols=40  Identities=10%  Similarity=0.151  Sum_probs=34.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL  198 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~  198 (332)
                      ...||++.+|++.+.++    ++++|.|++ +..++..++..+++
T Consensus        44 ~~kRP~l~eFL~~~~~~----feIvVwTAa-~~~ya~~~l~~l~~   83 (195)
T TIGR02245        44 ELMRPYLHEFLTSAYED----YDIVIWSAT-SMKWIEIKMTELGV   83 (195)
T ss_pred             EEeCCCHHHHHHHHHhC----CEEEEEecC-CHHHHHHHHHHhcc
Confidence            35799999999999984    899999998 58999999987664

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=87.03  E-value=1.8  Score=33.95  Aligned_cols=42  Identities=10%  Similarity=0.088  Sum_probs=29.8

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccc--cCHHHHHHHHHhcCCC
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSSAGLN  199 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g--~s~~~I~~~l~~~g~~  199 (332)
                      ..-||+.++++.++++|   .+++++|-+  .+..-+...|+.+|++
T Consensus        14 ~~ipga~e~l~~L~~~g---~~~~~lTNns~~s~~~~~~~L~~~Gi~   57 (101)
T PF13344_consen   14 EPIPGAVEALDALRERG---KPVVFLTNNSSRSREEYAKKLKKLGIP   57 (101)
T ss_dssp             EE-TTHHHHHHHHHHTT---SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred             CcCcCHHHHHHHHHHcC---CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence            45799999999999999   999999975  2223344445677874

...

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=86.40  E-value=0.66  Score=42.72  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=31.3

Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~  271 (332)
                      +...++..+.+.+.+ ..++++|||+. +|+.+...+++ .+.+.
T Consensus       181 ~p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~  224 (257)
T TIGR01458       181 SKTFFLEALRATGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVR  224 (257)
T ss_pred             CHHHHHHHHHHhCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence            345666666666553 47899999996 99999999998 44444

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=86.19  E-value=0.72  Score=49.80  Aligned_cols=40  Identities=18%  Similarity=0.117  Sum_probs=31.7

Q ss_pred             CCcchHHHHHHHHHH---hCCCCCceEEEEeCCccchHHhhhcC
Q 020024          225 SPIDKVQAFNNTLEK---YGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~---~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      .+.+|..+++.+++.   .+. ..+.++++||+.||..|++.++
T Consensus       759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence            466899999988753   233 2468999999999999999875

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=86.09  E-value=0.42  Score=49.08  Aligned_cols=46  Identities=9%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee----EEEcCCh
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG----IVIGSSS  274 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g----vv~~~~~  274 (332)
                      |...|+.++.-+......-...+|.=.||.-.-+.++|+    +.|+++.
T Consensus       634 KIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkG  683 (738)
T KOG2116|consen  634 KIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKG  683 (738)
T ss_pred             hHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCc
Confidence            677777776655422223455688888998888888873    4566554

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=85.80  E-value=11  Score=35.14  Aligned_cols=86  Identities=21%  Similarity=0.177  Sum_probs=49.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccc--cCHHHHHHHHHhcC-CCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSSAG-LNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g--~s~~~I~~~l~~~g-~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      -..-||+.++|+.++++|   .++++||-|  -+.+....-|..++ ++.   --      +.++|        ++    
T Consensus        23 ~~~ipga~e~l~~L~~~g---~~~iflTNn~~~s~~~~~~~L~~~~~~~~---~~------~~i~T--------S~----   78 (269)
T COG0647          23 NEAIPGAAEALKRLKAAG---KPVIFLTNNSTRSREVVAARLSSLGGVDV---TP------DDIVT--------SG----   78 (269)
T ss_pred             CccCchHHHHHHHHHHcC---CeEEEEeCCCCCCHHHHHHHHHhhcCCCC---CH------HHeec--------HH----
Confidence            356799999999999999   999999965  22333444444422 210   00      11111        11    


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      .+..+++.+...  +.+++.+| ..++...+..++.
T Consensus        79 ~at~~~l~~~~~--~~kv~viG-~~~l~~~l~~~G~  111 (269)
T COG0647          79 DATADYLAKQKP--GKKVYVIG-EEGLKEELEGAGF  111 (269)
T ss_pred             HHHHHHHHhhCC--CCEEEEEC-CcchHHHHHhCCc
Confidence            222334433221  25788888 5567777877774

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=85.47  E-value=0.97  Score=38.01  Aligned_cols=40  Identities=13%  Similarity=0.277  Sum_probs=32.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG  197 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g  197 (332)
                      .+.+|||+.+|++++.+.    ++++|.|++ +..+++.+++...
T Consensus        34 ~v~~RP~l~~FL~~l~~~----~ev~i~T~~-~~~ya~~v~~~ld   73 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH----YEVVIWTSA-SEEYAEPVLDALD   73 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH----CEEEEE-SS--HHHHHHHHHHHT
T ss_pred             eEeeCchHHHHHHHHHHh----ceEEEEEee-hhhhhhHHHHhhh
Confidence            367899999999999765    899999999 5999999998764

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=84.79  E-value=3.4  Score=36.22  Aligned_cols=103  Identities=14%  Similarity=0.187  Sum_probs=63.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH--
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV--  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~--  230 (332)
                      +-+++|.+.+.|++-++.|   .+++|-|+| |-. .+..+  +|    |..+-++   ++.+.|.|+..+   ..|.  
T Consensus       101 kahlypDav~~ik~wk~~g---~~vyiYSSG-SV~-AQkL~--Fg----hs~agdL---~~lfsGyfDtti---G~KrE~  163 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALG---MRVYIYSSG-SVK-AQKLF--FG----HSDAGDL---NSLFSGYFDTTI---GKKRES  163 (229)
T ss_pred             ccccCHhHHHHHHHHHHcC---CcEEEEcCC-Cch-hHHHh--hc----ccccccH---Hhhhcceeeccc---cccccc
Confidence            4689999999999999989   999999988 321 11111  11    1111111   134556665311   1122  


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe--eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI--GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~--gvv~~~~  273 (332)
                      .--.++....|.. ...++|+.|-..-|.++..+++  |.+.+++
T Consensus       164 ~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g  207 (229)
T COG4229         164 QSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPG  207 (229)
T ss_pred             hhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCC
Confidence            2223355555553 4689999999999999999987  3444433

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=84.14  E-value=0.98  Score=48.59  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=33.5

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +..|...++++.+-     +..+=+.|||.||--+|++||+||-....
T Consensus       838 P~qK~~Lie~lQkl-----~y~VgfCGDGANDCgALKaAdvGISLSea  880 (1140)
T KOG0208|consen  838 PDQKAELIEALQKL-----GYKVGFCGDGANDCGALKAADVGISLSEA  880 (1140)
T ss_pred             chhHHHHHHHHHhc-----CcEEEecCCCcchhhhhhhcccCcchhhh
Confidence            45677777665531     35788999999999999999999887744

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=83.69  E-value=2.3  Score=44.13  Aligned_cols=109  Identities=19%  Similarity=0.252  Sum_probs=67.0

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eeeE-Ec-Cceecc----ccc----c-c
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFS-FK-ESISTG----EII----E-K  222 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~a-N~l~-~~-~g~~tG----~~~----~-~  222 (332)
                      +.|..-.+.+++...-|   ..+-++++-- -.+-.+.-+++|.. ..+|- ..+. -. |+...|    .+.    + -
T Consensus       492 pprhdsa~tirral~lG---v~Vkmitgdq-laI~keTgrrlgmg-tnmypss~llG~~~~~~~~~~~v~elie~adgfA  566 (942)
T KOG0205|consen  492 PPRHDSAETIRRALNLG---VNVKMITGDQ-LAIAKETGRRLGMG-TNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA  566 (942)
T ss_pred             CCccchHHHHHHHHhcc---ceeeeecchH-HHHHHhhhhhhccc-cCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence            34667778888877777   8999999752 44555555555532 11221 1111 10 111111    010    0 1


Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ......|.++++.+..+     ...+-..|||.||-|+|+.||+|+++.+.
T Consensus       567 gVfpehKy~iV~~Lq~r-----~hi~gmtgdgvndapaLKkAdigiava~a  612 (942)
T KOG0205|consen  567 GVFPEHKYEIVKILQER-----KHIVGMTGDGVNDAPALKKADIGIAVADA  612 (942)
T ss_pred             ccCHHHHHHHHHHHhhc-----CceecccCCCcccchhhcccccceeeccc
Confidence            34557899999877653     23455899999999999999999999866

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=82.74  E-value=1.6  Score=37.19  Aligned_cols=42  Identities=14%  Similarity=0.010  Sum_probs=36.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL  198 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~  198 (332)
                      ..+.+|||+.+|++.+.+ .   ++++|+|++- ..+...+++.++.
T Consensus        55 ~~v~~rPgv~efL~~l~~-~---yel~I~T~~~-~~yA~~vl~~ldp   96 (156)
T TIGR02250        55 YLTKLRPFLHEFLKEASK-L---YEMHVYTMGT-RAYAQAIAKLIDP   96 (156)
T ss_pred             EEEEECCCHHHHHHHHHh-h---cEEEEEeCCc-HHHHHHHHHHhCc
Confidence            357899999999999984 4   8999999995 9999999988764

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR00685 T6PP trehalose-phosphatase

Probab=81.18  E-value=0.92  Score=41.29  Aligned_cols=15  Identities=27%  Similarity=0.324  Sum_probs=13.2

Q ss_pred             CceEEEEeCCCCccc
Q 020024           30 DRLIIFSDFDLTCTI   44 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~   44 (332)
                      ++.++++||||||+.
T Consensus         2 ~~~~l~lD~DGTL~~   16 (244)
T TIGR00685         2 RKRAFFFDYDGTLSE   16 (244)
T ss_pred             CcEEEEEecCccccC
Confidence            567899999999995

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	332
2g09_A	297	Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP	2e-07
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	4e-07
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	2e-06
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	4e-06
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	1e-05
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	2e-05

>2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 42/233 (18%), Positives = 84/233 (36%), Gaps = 35/233 (15%)

Query: 30  DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 89
            +L I +DFD+T +                 +   N         +   + +   L++ +
Sbjct: 42  AKLQIITDFDMTLS-----------------RFSYNGKRCP----TCHNIIDNCKLVTDE 80

Query: 90  YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 149
              +  Q  E +   E       E     + +   +  +++  +IE G+ K    E +  
Sbjct: 81  CRRKLLQLKEQYYAIEVDPVLTVEEKFPYMVE---WYTKSHGLLIEQGIPKAKLKEIVAD 137

Query: 150 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH--ANE 207
           +   + L++G   FF K+   +     V + S    GD++      AG+   NV   +N 
Sbjct: 138 SD--VMLKEGYENFFGKL---QQHGIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVSNF 191

Query: 208 FSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDL 258
             F E+        ++    +K        + +    D  N+ + +GDS GDL
Sbjct: 192 MDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 243

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 27/241 (11%), Positives = 64/241 (26%), Gaps = 63/241 (26%)

Query: 31  RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 90
           +  I  DFD T T+ D+   + +                                     
Sbjct: 6   KPFIICDFDGTITMNDNIINIMK----------------TFAP----------------- 32

Query: 91  TEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDI-KK 149
             E+    +  +           ++ + + +               G+L     E+I   
Sbjct: 33  -PEWMALKDGVLSKTL-------SIKEGVGR----------MF---GLLPSSLKEEITSF 71

Query: 150 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFS 209
             E   +++G   F   + ++       +V+S       +             ++ N  S
Sbjct: 72  VLEDAKIREGFREFVAFINEH---EIPFYVIS-GGMDFFVYPLLEGIVEK-DRIYCNHAS 126

Query: 210 FKESISTGEIIEKVESPIDKVQAFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 267
           F       +     +            + + +     + + + IGDSV D+     +D+ 
Sbjct: 127 FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYI-IMIGDSVTDVEAAKLSDLC 185

Query: 268 I 268
            
Sbjct: 186 F 186

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 14/146 (9%)

Query: 125 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 182
           F K    RV     LK + L+  K+  E L L +G       + +    N  V   S  +
Sbjct: 48  FHKSLILRV---SKLKNMPLKLAKEVCESLPLFEGALELVSALKEK---NYKVVCFSGGF 101

Query: 183 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 242
               +  R       L+     +N    +     G +   +     K +           
Sbjct: 102 DLATNHYRDL-----LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLLNI 156

Query: 243 DRKNLSVYIGDSVGDLLCLLEADIGI 268
            + N ++ +GD   DL     A I I
Sbjct: 157 SKTN-TLVVGDGANDLSMFKHAHIKI 181

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 52/365 (14%), Positives = 98/365 (26%), Gaps = 140/365 (38%)

Query: 32  LIIFSD---------FDLTCTIV----DSSAILAEIAIVTAPKS--------DQNQPENQ 70
           L++  +         F+L+C I+             A  T   S          ++ ++ 
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 71  LGR---MSSGELR----------------------NTWG----LLSKQYTEEYEQCIESF 101
           L +       +L                        TW     +   + T   E  +   
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 102 MPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVL-------KGINLEDIKKAGERL 154
            P+E  + F         ++LS F   A+   I + +L          ++  +     + 
Sbjct: 367 EPAEYRKMF---------DRLSVFPPSAH---IPTILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 155 SL--QDGCTT-------FFQKVVKNENLNANVH---VLSY----CWCGD----------- 187
           SL  +    +       + +  VK EN    +H   V  Y     +  D           
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENE-YALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473

Query: 188 -------LIRAS-------FSSAGLNALNVHANEFSFKES--ISTGEIIEKVESPIDKVQ 231
                  L           F    L+        F F E              S ++ +Q
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRMVFLD--------FRFLEQKIRHDSTAWNASGSILNTLQ 525

Query: 232 AFNNTLEKYGTDRKNLSVYIGDS-------VGDLLC-LLEADIGIVIGSSSSLRRVGSQF 283
                L+ Y   +     YI D+       V  +L  L + +  ++    + L R+    
Sbjct: 526 ----QLKFY---KP----YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574

Query: 284 GVTFI 288
               I
Sbjct: 575 EDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 51/335 (15%), Positives = 99/335 (29%), Gaps = 68/335 (20%)

Query: 29  GDRLIIF-SDF--DLTCT-IVDS-SAIL--AEI-AIVTAPKSDQ----------NQPENQ 70
            D L +F   F  +  C  + D   +IL   EI  I+ +  +            ++ E  
Sbjct: 19  KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 71  LGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSH-FEKRA 129
           + +     LR  +  L      E  Q      PS     +  +     L   +  F K  
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQ--RDRLYNDNQVFAKYN 130

Query: 130 NSRVIESGVLKGINLEDIKKAGERLSLQ--DGC--TTFFQKVVKNE----NLNANVHVLS 181
            SR+     L+   L +++ A + + +    G   T     V  +      ++  +  L+
Sbjct: 131 VSRLQPYLKLR-QALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 182 --YCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEK 239
              C   + +        L  L    +        S  +    ++  I  +QA    L K
Sbjct: 189 LKNCNSPETVLEM-----LQKLLYQID----PNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 240 YGTDRKNLSVYIGDSVGDLLCLLEA-DIG---IVIGSSSSLRRVGSQFGVTFIPLYPGLV 295
                +N  + +  +V +      A ++    ++      +    S    T I     L 
Sbjct: 240 S-KPYEN-CLLVLLNVQNAKA-WNAFNLSCKILLTTRFKQVTDFLSAATTTHIS----LD 292

Query: 296 KKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFIL 330
                 T        E   +L     + +     L
Sbjct: 293 HHSMTLTP------DEVKSLL---LKYLDCRPQDL 318

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 14/146 (9%)

Query: 125 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 182
           F +    RV     L G+    I +   +L L  G  T  + + +         V+S  +
Sbjct: 229 FAQSLQQRV---ATLAGLPATVIDEVAGQLELMPGARTTLRTLRRL---GYACGVVSGGF 282

Query: 183 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 242
               + +        L    V ANE    +   TG ++  +     K  A     ++ G 
Sbjct: 283 RRIIEPLAEE-----LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGV 337

Query: 243 DRKNLSVYIGDSVGDLLCLLEADIGI 268
                +V +GD   D+  L  A +GI
Sbjct: 338 PMAQ-TVAVGDGANDIDMLAAAGLGI 362

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 125 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--Y 182
           FE+    RV    +LK + +E ++KA +R++  +G     +++         V V+S  +
Sbjct: 49  FEQSLRKRV---SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNR---GYVVAVVSGGF 102

Query: 183 CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 242
               + I+      GL+     AN    K+   TG++  +V     K +      +  G 
Sbjct: 103 DIAVNKIKEKL---GLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGI 157

Query: 243 DRKNLSVYIGDSVGDLLCLLEADIGI 268
           + ++ +V +GD   D+    +A + I
Sbjct: 158 NLED-TVAVGDGANDISMFKKAGLKI 182

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 12/145 (8%)

Query: 125 FEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW 184
           F      R+   G+LKG     +    +R++L  G  T    +           ++S   
Sbjct: 152 FNASFTRRI---GMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAK---GFKTAIIS--- 202

Query: 185 CGDLIR-ASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 243
            G L        A        +N    ++++ T  I   + +  +K Q   +   +    
Sbjct: 203 -GGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA 261

Query: 244 RKNLSVYIGDSVGDLLCLLEADIGI 268
            +N  +  GD   DL  L  A  GI
Sbjct: 262 TEN-IIACGDGANDLPMLEHAGTGI 285

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 14/139 (10%)

Query: 132 RVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLS--YCWCGDLI 189
           RV     LK    + + +  E L L          +         V + S  + +  D +
Sbjct: 158 RV---SKLKDAPEQILSQVRETLPLMPELPELVATL---HAFGWKVAIASGGFTYFSDYL 211

Query: 190 RASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSV 249
           +       L+     +N         TG+++ +V S   K        ++Y  +  N +V
Sbjct: 212 KEQ-----LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHN-TV 265

Query: 250 YIGDSVGDLLCLLEADIGI 268
            +GD   DL+ +  A +G+
Sbjct: 266 AVGDGANDLVMMAAAGLGV 284

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	332
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.94
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.91
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.86
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.85
4gxt_A	385	A conserved functionally unknown protein; structur	99.85
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.83
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.78
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.75
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.71
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	99.7
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.7
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.63
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.56
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.55
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.4
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.37
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.35
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.34
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.34
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.33
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.31
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.31
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.3
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.3
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.29
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.28
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.27
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.27
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.27
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.27
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.24
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.23
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.23
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.23
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.2
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.19
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.19
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.19
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.18
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.18
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.17
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.17
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.16
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.15
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.15
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.15
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.15
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.14
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.14
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.14
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.14
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.12
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.12
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.12
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.11
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.11
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.09
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.09
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.08
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.08
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.07
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.03
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.02
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.02
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.0
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.99
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	98.98
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.97
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	98.95
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.94
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.92
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.92
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.42
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.89
2zg6_A	220	Putative uncharacterized protein ST2620, probable	98.84
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.84
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.82
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.82
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.81
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	98.81
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.8
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.79
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.76
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.75
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.72
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.72
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.69
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.68
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.67
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.64
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.62
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.61
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.6
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.59
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.54
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	98.54
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.53
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.52
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.52
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.52
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.52
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.52
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.51
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.5
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.46
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.45
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.4
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.39
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.39
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.39
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	98.35
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.35
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.34
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.33
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.32
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.3
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	98.22
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	98.2
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.14
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.12
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.06
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	98.03
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.94
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	97.91
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.82
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.82
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	97.77
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.77
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.76
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	97.69
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.56
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.49
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.48
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.46
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.37
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	97.37
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.36
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.35
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.29
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.26
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.25
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.23
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	96.55
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.49
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	96.45
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	96.42
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	95.92
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	95.9
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	95.13
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	95.12
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	94.67
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	94.56
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	94.13
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	94.08
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	94.05
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	93.7
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	93.56
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	92.95
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	92.83
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	92.25
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	91.84
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	91.65
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	90.49
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	89.4
3mmz_A	176	Putative HAD family hydrolase; structural genomics	84.62
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	84.31
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	83.41
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	83.09
3mn1_A	189	Probable YRBI family phosphatase; structural genom	82.41
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	82.23
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	81.8
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	81.7
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	81.3

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.94  E-value=3.9e-25  Score=196.49  Aligned_cols=148  Identities=18%  Similarity=0.146  Sum_probs=130.6

Q ss_pred             hcCCCCHHHHHHHhhc-------CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEE
Q 020024          138 VLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF  210 (332)
Q Consensus       138 ~f~G~~~~~l~~~~~~-------i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~  210 (332)
                      .+.|++.+++.+..+.       ..++||+.++++.|+++|   ++++|+|++. ..+++.+++.+|+  .+++++.+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~~~~~~~~~g~--~~~~~~~~~~  141 (232)
T 3fvv_A           68 LLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAG---DLCALVTATN-SFVTAPIARAFGV--QHLIATDPEY  141 (232)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHTTGGGCCHHHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTC--CEEEECEEEE
T ss_pred             HhcCCCHHHHHHHHHHHHHHhhhhhcCHHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC--CEEEEcceEE
Confidence            4457888887766532       268999999999999999   9999999996 8999999999887  4799999999


Q ss_pred             cCceecccccccCCCCcchHHHHHHHHHHhC---CCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCee
Q 020024          211 KESISTGEIIEKVESPIDKVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTF  287 (332)
Q Consensus       211 ~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~  287 (332)
                      .+|.++|.+.++.+.+.+|...++.++...+   . ...+++|||||.+|++|+..|++++++++++.|.+.|++++|++
T Consensus       142 ~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~-~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~~~a~~~~w~~  220 (232)
T 3fvv_A          142 RDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALG-DFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQV  220 (232)
T ss_dssp             ETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGG-GSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHHHHHHHHTCEE
T ss_pred             ECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcC-chhheEEEeCCHhhHHHHHhCCCeEEECcCHHHHHHHHHCCCcE
Confidence            9999999888778888999999999988776   4 24789999999999999999999999999999999999999999


Q ss_pred             eecCc
Q 020024          288 IPLYP  292 (332)
Q Consensus       288 ~p~~~  292 (332)
                      ++|.+
T Consensus       221 ~~~~~  225 (232)
T 3fvv_A          221 IDLFD  225 (232)
T ss_dssp             ECCC-
T ss_pred             eehhh
Confidence            99976

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.91  E-value=2.3e-24  Score=200.69  Aligned_cols=209  Identities=19%  Similarity=0.264  Sum_probs=157.0

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      ++++++|||||||||+.+....         +..            +++.+.+.+..+.+.|......+.++|.|.+...
T Consensus        41 ~~kL~VV~DfdgTLT~~~~~g~---------~~~------------s~~~i~e~~~~~~~~~~~~~~~l~~~y~~~e~~~   99 (297)
T 4fe3_A           41 AAKLQIITDFNMTLSRFSYNGK---------RCP------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDP   99 (297)
T ss_dssp             HHHEEEEECCTTTTBCSEETTE---------ECC------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHCS
T ss_pred             chhEEEEEcCCCCceeeccCCe---------Eee------------chHHHHHhhhhcCHHHHHHHHHHHHhhccccccc
Confidence            3567899999999998764211         000            1122333444555667777777888888888777


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG  186 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~  186 (332)
                      ..+.++..+.   |.+|+.+++..+.+.    |++.+.+.+.++  .+++|||+.++++.|+++|   ++++|+|+|+ .
T Consensus       100 ~~~~~ek~~~---~~~~~~~~~e~l~~~----gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~g---i~v~ivSgg~-~  168 (297)
T 4fe3_A          100 VLTVEEKFPY---MVEWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-G  168 (297)
T ss_dssp             SSCHHHHHHH---HHHHHHHHHHHHHHT----TCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTT---CCEEEEEEEE-H
T ss_pred             cccHHHhhhh---hHHhhhhhHHHHhhc----CccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcC---CeEEEEeCCc-H
Confidence            7888887765   457889998888775    677888888765  5899999999999999999   9999999998 8


Q ss_pred             HHHHHHHHhcCC--CcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHH---HHhCCCCCceEEEEeCCccchHHh
Q 020024          187 DLIRASFSSAGL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTL---EKYGTDRKNLSVYIGDSVGDLLCL  261 (332)
Q Consensus       187 ~~I~~~l~~~g~--~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~---~~~~~~~~~~viyiGDs~~Dl~~l  261 (332)
                      .+++++++++|+  ++.+|+||.+.++++..++.+.+++....+|...+.+..   ....  .+.+++++|||.||++|+
T Consensus       169 ~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k~~~~~~~~~--~~~~v~~vGDGiNDa~m~  246 (297)
T 4fe3_A          169 DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLK--DNSNIILLGDSQGDLRMA  246 (297)
T ss_dssp             HHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTCHHHHHHTT--TCCEEEEEESSGGGGGTT
T ss_pred             HHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHHHHHHHHhhc--cCCEEEEEeCcHHHHHHH
Confidence            999999999886  456899999999987777767666655556654433221   1111  246899999999999995


Q ss_pred             h---hcCeeEEEc
Q 020024          262 L---EADIGIVIG  271 (332)
Q Consensus       262 ~---~Ad~gvv~~  271 (332)
                      .   .||+|+.++
T Consensus       247 k~l~~advgiaiG  259 (297)
T 4fe3_A          247 DGVANVEHILKIG  259 (297)
T ss_dssp             TTCSCCSEEEEEE
T ss_pred             hCccccCeEEEEE
Confidence            4   899998877

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.86  E-value=1.5e-20  Score=182.89  Aligned_cols=193  Identities=20%  Similarity=0.257  Sum_probs=155.8

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +++.+++|||||||++.+++..+++..     .                 ....+..+...++.+               
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g---------------  225 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKA-----G-----------------AEGQVAAITDAAMRG---------------  225 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTT---------------
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHc-----C-----------------CcHHHHHHHHHHhcC---------------
Confidence            567799999999999999887777653     1                 233344443333221               


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                      ..+..+.+.             .+   ...++|++.+.+.++.+.+.++||+.++++.|+++|   ++++|+|+++ ..+
T Consensus       226 ~~~~~~~~~-------------~~---~~~l~~~~~~~~~~~~~~~~~~pg~~e~l~~Lk~~G---~~~~ivS~~~-~~~  285 (415)
T 3p96_A          226 ELDFAQSLQ-------------QR---VATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLG---YACGVVSGGF-RRI  285 (415)
T ss_dssp             CSCHHHHHH-------------HH---HHTTTTCBTHHHHHHHHHCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred             CcCHHHHHH-------------HH---HHHhcCCCHHHHHHHHHhCccCccHHHHHHHHHHCC---CEEEEEcCCc-HHH
Confidence            133322221             12   357789999999999899999999999999999999   9999999997 899


Q ss_pred             HHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          189 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       189 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ++.+++.+|+  .++++|.+.+.+|.+||.+.+.+..+..|...++.++++.+.. ..+++|||||.||++|+..||+|+
T Consensus       286 ~~~~~~~lgl--~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~v  362 (415)
T 3p96_A          286 IEPLAEELML--DYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVP-MAQTVAVGDGANDIDMLAAAGLGI  362 (415)
T ss_dssp             HHHHHHHTTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHHcCc--cceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcC-hhhEEEEECCHHHHHHHHHCCCeE
Confidence            9999999888  5789999999999999998887888889999999999988874 578999999999999999999999


Q ss_pred             EEcCChhHHHHhH
Q 020024          269 VIGSSSSLRRVGS  281 (332)
Q Consensus       269 v~~~~~~L~~~~~  281 (332)
                      ++++++.+++.|.
T Consensus       363 a~~~~~~~~~~ad  375 (415)
T 3p96_A          363 AFNAKPALREVAD  375 (415)
T ss_dssp             EESCCHHHHHHCS
T ss_pred             EECCCHHHHHhCC
Confidence            9988887766553

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.85  E-value=4.4e-20  Score=173.98  Aligned_cols=192  Identities=17%  Similarity=0.186  Sum_probs=152.9

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +++.+++|||||||++.++...+++..     .                 ....+..+...|+.+               
T Consensus       106 ~~~kaviFDlDGTLid~~~~~~la~~~-----g-----------------~~~~~~~~~~~~~~g---------------  148 (317)
T 4eze_A          106 PANGIIAFDMDSTFIAEEGVDEIAREL-----G-----------------MSTQITAITQQAMEG---------------  148 (317)
T ss_dssp             CCSCEEEECTBTTTBSSCHHHHHHHHT-----T-----------------CHHHHHHHHHHHHTT---------------
T ss_pred             CCCCEEEEcCCCCccCCccHHHHHHHh-----C-----------------CcHHHHHHHHHHhcC---------------
Confidence            567899999999999999887766642     1                 233444433333221               


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                      ..+..+.+.             .+   ...+.|...+.+.++.+.+.++||+.++++.++++|   ++++|+|+++ ..+
T Consensus       149 ~~~~~~~l~-------------~~---~~~l~~~~~~~i~~~~~~~~l~pg~~e~L~~Lk~~G---~~v~IvSn~~-~~~  208 (317)
T 4eze_A          149 KLDFNASFT-------------RR---IGMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKG---FKTAIISGGL-DIF  208 (317)
T ss_dssp             SSCHHHHHH-------------HH---HHTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHH
T ss_pred             CCCHHHHHH-------------HH---HHHhcCCCHHHHHHHHhCCEECcCHHHHHHHHHhCC---CEEEEEeCcc-HHH
Confidence            133322221             11   356778899999999999999999999999999999   9999999997 899


Q ss_pred             HHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          189 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       189 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ++.+++.+|+  ..+++|.+.+++|.++|.+.+.+..+..|...++.++.+.+.. ..+++|||||.+|++|++.||+++
T Consensus       209 ~~~~l~~lgl--~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~v  285 (317)
T 4eze_A          209 TQRLKARYQL--DYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIA-TENIIACGDGANDLPMLEHAGTGI  285 (317)
T ss_dssp             HHHHHHHHTC--SEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHHcCC--CeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHCCCeE
Confidence            9999999888  5789999999999999988877777788999999999888874 478999999999999999999999


Q ss_pred             EEcCChhHHHHh
Q 020024          269 VIGSSSSLRRVG  280 (332)
Q Consensus       269 v~~~~~~L~~~~  280 (332)
                      ++++++.+++.+
T Consensus       286 a~~~~~~~~~~a  297 (317)
T 4eze_A          286 AWKAKPVVREKI  297 (317)
T ss_dssp             EESCCHHHHHHC
T ss_pred             EeCCCHHHHHhc
Confidence            998777666554

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.85  E-value=5.7e-20  Score=177.49  Aligned_cols=145  Identities=18%  Similarity=0.232  Sum_probs=115.8

Q ss_pred             hhcCCCCHHHHHHHhhc----------------------------------CCCChhHHHHHHHHHHcCCCCCcEEEEcc
Q 020024          137 GVLKGINLEDIKKAGER----------------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSY  182 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~----------------------------------i~lrpg~~e~l~~l~~~g~~~~~~~IvS~  182 (332)
                      .+|.|++.+++++.++.                                  ++++||+.++++.|+++|   ++++|||+
T Consensus       169 ~l~~GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G---~~v~IVSg  245 (385)
T 4gxt_A          169 FLLKNYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENG---IDCYIVSA  245 (385)
T ss_dssp             GGGTTCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred             HHHcCCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCC---CeEEEEcC
Confidence            58899999999887541                                  237999999999999999   99999999


Q ss_pred             ccCHHHHHHHHHhcC----CCcceEEeeeeEEc-Cceecccccc--cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCc
Q 020024          183 CWCGDLIRASFSSAG----LNALNVHANEFSFK-ESISTGEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV  255 (332)
Q Consensus       183 g~s~~~I~~~l~~~g----~~~~~I~aN~l~~~-~g~~tG~~~~--~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~  255 (332)
                      |. .++++++.+.+|    +++.+|++|+++++ +|.+||++.+  +++.+.+|..++++++... . ....++++|||.
T Consensus       246 g~-~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~-~-~~~~i~a~GDs~  322 (385)
T 4gxt_A          246 SF-IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKND-R-NYGPIMVGGDSD  322 (385)
T ss_dssp             EE-HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCT-T-EECCSEEEECSG
T ss_pred             Cc-HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhc-C-CCCcEEEEECCH
Confidence            98 899999998764    56679999999996 6899998864  5678899999999987532 1 235689999999


Q ss_pred             cchHHhhh---cCeeEEEcCC-----hhHHHHhHhcCCee
Q 020024          256 GDLLCLLE---ADIGIVIGSS-----SSLRRVGSQFGVTF  287 (332)
Q Consensus       256 ~Dl~~l~~---Ad~gvv~~~~-----~~L~~~~~~~~~~~  287 (332)
                      ||++||+.   +.+++++++.     ..|.+.+.+.++.+
T Consensus       323 ~D~~ML~~~~~~~~~liinr~~~~~~~~l~~~a~~~~~~~  362 (385)
T 4gxt_A          323 GDFAMLKEFDHTDLSLIIHRANSGLIDDLRQKAREGSLRY  362 (385)
T ss_dssp             GGHHHHHHCTTCSEEEEECCSCCSHHHHHHHHHHTTCSSE
T ss_pred             hHHHHHhcCccCceEEEEcCCcccchHHHHHHHhccCCeE
Confidence            99999996   4457888754     24555555545444

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.83  E-value=1.1e-19  Score=158.79  Aligned_cols=136  Identities=17%  Similarity=0.153  Sum_probs=119.6

Q ss_pred             hhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceec
Q 020024          137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST  216 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t  216 (332)
                      ..+.|.+.+++.++.+.+.++||+.++++.++++|   ++++|+|.+. ..+++..++.+|+  ...+.+.+.++++.++
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~gl--~~~f~~~~~~~~~~~~  130 (217)
T 3m1y_A           57 SKLKNMPLKLAKEVCESLPLFEGALELVSALKEKN---YKVVCFSGGF-DLATNHYRDLLHL--DAAFSNTLIVENDALN  130 (217)
T ss_dssp             HTTTTCBHHHHHHHHTTCCBCBTHHHHHHHHHTTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHhcCcCCCCHHHHHHHHHHCC---CEEEEEcCCc-hhHHHHHHHHcCc--chhccceeEEeCCEEE
Confidence            45678999999999888999999999999999998   9999999986 8899999998887  4578888888888888


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHH
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV  279 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~  279 (332)
                      |.+.+..+.+..|...++.++...+.. ..++++||||.+|++|++.||+++++++.+.+++.
T Consensus       131 ~~~~~~~~~~k~k~~~~~~~~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~  192 (217)
T 3m1y_A          131 GLVTGHMMFSHSKGEMLLVLQRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQH  192 (217)
T ss_dssp             EEEEESCCSTTHHHHHHHHHHHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTT
T ss_pred             eeeccCCCCCCChHHHHHHHHHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHh
Confidence            888777778889999999999888874 47899999999999999999999999887776544

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.78  E-value=3.4e-18  Score=161.49  Aligned_cols=136  Identities=16%  Similarity=0.182  Sum_probs=119.4

Q ss_pred             hhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceec
Q 020024          137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST  216 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t  216 (332)
                      ..+++.+.+.+..+.+.++++||+.++++.++++|   ++++|+|++. ..+++.+++.+|+  ..+++|.+++.++.++
T Consensus       160 ~~l~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~~~~~~~lgl--~~~~~~~l~~~d~~~t  233 (335)
T 3n28_A          160 SKLKDAPEQILSQVRETLPLMPELPELVATLHAFG---WKVAIASGGF-TYFSDYLKEQLSL--DYAQSNTLEIVSGKLT  233 (335)
T ss_dssp             HTTTTCBTTHHHHHHTTCCCCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHHhCCcCcCHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--CeEEeeeeEeeCCeee
Confidence            44677888888888888999999999999999999   9999999996 8899999999887  5789999999999999


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHH
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV  279 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~  279 (332)
                      |.+.+.+..+..|...++.++...+.. ..++++||||.||++|++.||+|+++++.+.+++.
T Consensus       234 g~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~  295 (335)
T 3n28_A          234 GQVLGEVVSAQTKADILLTLAQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAK  295 (335)
T ss_dssp             EEEESCCCCHHHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTT
T ss_pred             eeecccccChhhhHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhh
Confidence            988777777888999999999988874 47899999999999999999999999877765543

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.75  E-value=1e-16  Score=138.62  Aligned_cols=132  Identities=20%  Similarity=0.251  Sum_probs=103.1

Q ss_pred             hcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecc
Q 020024          138 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTG  217 (332)
Q Consensus       138 ~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG  217 (332)
                      .+.|....+..+......+.||+.++++.++++|   +++.|+|++. ...+...++.+|+  ..+++|.+.+.++..+|
T Consensus        59 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  132 (211)
T 1l7m_A           59 LLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLTG  132 (211)
T ss_dssp             TTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---EEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEEE
T ss_pred             HhcCCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHcCC--CeEEEeeeEEECCEEcC
Confidence            4567766666666667788999999999999999   9999999885 6778888887776  34566666555555555


Q ss_pred             cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhH
Q 020024          218 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL  276 (332)
Q Consensus       218 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L  276 (332)
                      ........+.+|...+.+++...+.. ..++++||||.||++|++.|++++++++.+.+
T Consensus       133 ~~~~~~~~~~~K~~~l~~~~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~  190 (211)
T 1l7m_A          133 DVEGEVLKENAKGEILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAFCAKPIL  190 (211)
T ss_dssp             EEECSSCSTTHHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEEESCCHHH
T ss_pred             CcccCccCCccHHHHHHHHHHHcCCC-HHHEEEEecChhHHHHHHHCCCEEEECCCHHH
Confidence            54433444668999999999888874 47899999999999999999999999866544

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.71  E-value=1.4e-16  Score=136.83  Aligned_cols=119  Identities=18%  Similarity=0.270  Sum_probs=97.0

Q ss_pred             hhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceec
Q 020024          137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST  216 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t  216 (332)
                      ..+.+.+.+.+.++.+...++||+.++++.++++|   ++++|+|++. ...++.. +.+|+  ..+ ++.+.+.++..+
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~-~~~~~--~~~-~~~~~~~~~~~~  132 (201)
T 4ap9_A           61 GLIRGIDEGTFLRTREKVNVSPEARELVETLREKG---FKVVLISGSF-EEVLEPF-KELGD--EFM-ANRAIFEDGKFQ  132 (201)
T ss_dssp             HHTTTCBHHHHHHGGGGCCCCHHHHHHHHHHHHTT---CEEEEEEEEE-TTTSGGG-TTTSS--EEE-EEEEEEETTEEE
T ss_pred             HHhcCCCHHHHHHHHHhCCCChhHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHH-HHcCc--hhh-eeeEEeeCCceE
Confidence            45678899999999999999999999999999999   9999999986 6777777 77775  334 777777677666


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      +    +.+.+..|...++++    .   ..++++||||.||++|++.|+++|++++..
T Consensus       133 ~----~~~~~~~k~~~l~~l----~---~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~  179 (201)
T 4ap9_A          133 G----IRLRFRDKGEFLKRF----R---DGFILAMGDGYADAKMFERADMGIAVGREI  179 (201)
T ss_dssp             E----EECCSSCHHHHHGGG----T---TSCEEEEECTTCCHHHHHHCSEEEEESSCC
T ss_pred             C----CcCCccCHHHHHHhc----C---cCcEEEEeCCHHHHHHHHhCCceEEECCCC
Confidence            6    223344598888877    1   368999999999999999999999998764

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=99.70  E-value=3.4e-16  Score=147.83  Aligned_cols=137  Identities=17%  Similarity=0.173  Sum_probs=107.1

Q ss_pred             hhhcCCCCHHHHHHHhhc-------------------------CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHH
Q 020024          136 SGVLKGINLEDIKKAGER-------------------------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR  190 (332)
Q Consensus       136 ~~~f~G~~~~~l~~~~~~-------------------------i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~  190 (332)
                      ..+|+|++.+++.++++.                         +.++|++.++++.|+++|   ++++|||++. .++++
T Consensus        99 ~~~~aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G---~~v~ivSas~-~~~v~  174 (327)
T 4as2_A           99 AQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENG---IEVYVISAAH-EELVR  174 (327)
T ss_dssp             HHTTTTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTT---CEEEEEEEEE-HHHHH
T ss_pred             HHHHcCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHH
Confidence            468999999999887642                         268999999999999999   9999999997 88888


Q ss_pred             HHHHh----cCCCcceEEeeeeEEcCc---------------ee----------cccccccCCCCcchHHHHHHHHHHhC
Q 020024          191 ASFSS----AGLNALNVHANEFSFKES---------------IS----------TGEIIEKVESPIDKVQAFNNTLEKYG  241 (332)
Q Consensus       191 ~~l~~----~g~~~~~I~aN~l~~~~g---------------~~----------tG~~~~~~~~~~~K~~~l~~~~~~~~  241 (332)
                      ++.+.    +|++..+|++.+++.+++               .+          ++...++.+.+.+|...+++++.. +
T Consensus       175 ~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~-g  253 (327)
T 4as2_A          175 MVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDR-W  253 (327)
T ss_dssp             HHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS-S
T ss_pred             HHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHhh-C
Confidence            88865    588888999999887642               22          222334567789999999988732 1


Q ss_pred             CCCCceEEEEeCC-ccchHHhhhc----CeeEEEcCChhHHHHh
Q 020024          242 TDRKNLSVYIGDS-VGDLLCLLEA----DIGIVIGSSSSLRRVG  280 (332)
Q Consensus       242 ~~~~~~viyiGDs-~~Dl~~l~~A----d~gvv~~~~~~L~~~~  280 (332)
                         +..++++||| -+|++||..+    +++++++.+.+.++.+
T Consensus       254 ---~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~~~~e~~  294 (327)
T 4as2_A          254 ---KRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQI  294 (327)
T ss_dssp             ---CCCSEEEESCHHHHHHHHHHTSCTTCEEEEECCCHHHHHHH
T ss_pred             ---CCCeEEecCCCCCCHHHHhccccCCCeEEEEecCCchHHHH
Confidence               2468999999 5999999653    4688899886655433

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.70  E-value=4.3e-16  Score=139.24  Aligned_cols=115  Identities=17%  Similarity=0.172  Sum_probs=89.5

Q ss_pred             HHHHHHH-hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-CcceEEeeeeEEcCceeccccc-
Q 020024          144 LEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHANEFSFKESISTGEII-  220 (332)
Q Consensus       144 ~~~l~~~-~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~-~~~~I~aN~l~~~~g~~tG~~~-  220 (332)
                      .+++.++ ...+.++||+.++|+.|+++|   ++++|+|++. ..+++.+++  |+ +...|++++....++.+++.+. 
T Consensus        65 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~k  138 (236)
T 2fea_A           65 KEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPH  138 (236)
T ss_dssp             HHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTT
T ss_pred             HHHHHHHHhcCCCCCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCC
Confidence            4455554 456899999999999999999   9999999996 888888887  54 3357999998877766665542 


Q ss_pred             --cc-CC--CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          221 --EK-VE--SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       221 --~~-~~--~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                        +. +.  ++.+|..+++++.    . ...+++|||||.+|++++..||+.++
T Consensus       139 p~p~~~~~~~~~~K~~~~~~~~----~-~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          139 SCKGTCSNQCGCCKPSVIHELS----E-PNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             CCCTTCCSCCSSCHHHHHHHHC----C-TTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CCccccccccCCcHHHHHHHHh----c-cCCeEEEEeCChHHHHHHHhCCeeee
Confidence              22 22  5789998887652    2 24789999999999999999998765

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.63  E-value=1.2e-14  Score=128.06  Aligned_cols=124  Identities=19%  Similarity=0.199  Sum_probs=95.6

Q ss_pred             CHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEc-Cceecccc
Q 020024          143 NLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGEI  219 (332)
Q Consensus       143 ~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~  219 (332)
                      ..+.+.+...  ..+++||+.++++.|+++|   ++++|+|++. ...++.+++.+|+...+++++.+.++ ++.++|.-
T Consensus        72 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~  147 (225)
T 1nnl_A           72 SREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD  147 (225)
T ss_dssp             CHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC
T ss_pred             CHHHHHHHHHhccCCCCccHHHHHHHHHHCC---CcEEEEeCCh-HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCC
Confidence            4455555543  4789999999999999999   9999999986 88999999998885446888887765 35555432


Q ss_pred             cc-cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          220 IE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       220 ~~-~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .. +.+...+|...++.++...+.   .+++|||||.+|++++..||++|.++..
T Consensus       148 ~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~vGDs~~Di~~a~~ag~~i~~~~~  199 (225)
T 1nnl_A          148 ETQPTAESGGKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADAFIGFGGN  199 (225)
T ss_dssp             TTSGGGSTTHHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSEEEEECSS
T ss_pred             CCCcccCCCchHHHHHHHHHHcCC---CcEEEEeCcHHhHHHHHhCCeEEEecCc
Confidence            21 223345798888888887765   5799999999999999999997777643

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.56  E-value=8.5e-14  Score=120.44  Aligned_cols=113  Identities=17%  Similarity=0.154  Sum_probs=83.8

Q ss_pred             CHHHHHHHhh---cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEc-Cceeccc
Q 020024          143 NLEDIKKAGE---RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGE  218 (332)
Q Consensus       143 ~~~~l~~~~~---~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~  218 (332)
                      ..+.+.+..+   ...++||+.++++.++++|   ++++|+|++. ..+++..++.+|+...+++++.+.+. ++.+++ 
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  141 (219)
T 3kd3_A           67 TKQSIKEFSNKYCPNLLTDGIKELVQDLKNKG---FEIWIFSGGL-SESIQPFADYLNIPRENIFAVETIWNSDGSFKE-  141 (219)
T ss_dssp             BHHHHHHHHHHHTTTTBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEE-
T ss_pred             CHHHHHHHHHhhccccCChhHHHHHHHHHHCC---CeEEEEcCCc-HHHHHHHHHHcCCCcccEEEeeeeecCCCceec-
Confidence            4555555543   3568999999999999999   9999999986 88999999998986667899888884 455554 


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD  265 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad  265 (332)
                      +.++.+....|...+.+.+   +. ...++++||||.||++|++ ++
T Consensus       142 ~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~vGD~~~Di~~~~-~G  183 (219)
T 3kd3_A          142 LDNSNGACDSKLSAFDKAK---GL-IDGEVIAIGDGYTDYQLYE-KG  183 (219)
T ss_dssp             EECTTSTTTCHHHHHHHHG---GG-CCSEEEEEESSHHHHHHHH-HT
T ss_pred             cCCCCCCcccHHHHHHHHh---CC-CCCCEEEEECCHhHHHHHh-CC
Confidence            3333344445666665543   33 2478999999999999985 54

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.55  E-value=6.1e-13  Score=115.42  Aligned_cols=124  Identities=19%  Similarity=0.228  Sum_probs=93.8

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEc-Cceecccc
Q 020024          141 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ESISTGEI  219 (332)
Q Consensus       141 G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~  219 (332)
                      +++.+++.+..+.+.++||+.++++.++++    ++++|+|.+. ..+++.+++.+|+.  ..+++.+.+. ++..++..
T Consensus        55 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----~~~~i~s~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~~~~~~  127 (206)
T 1rku_A           55 GLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQ  127 (206)
T ss_dssp             TCCHHHHHHHHTTCCCCTTHHHHHHHHHTT----SEEEEEEEEE-HHHHHHHHHHTTCC--CEEEEEEEECTTSCEEEEE
T ss_pred             CCCHHHHHHHHHhcCCCccHHHHHHHHHhc----CcEEEEECCh-HHHHHHHHHHcCCc--ceecceeEEcCCceEEeee
Confidence            567777777777889999999999999953    7999999986 88999999988873  4566666653 33333321


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHH
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRV  279 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~  279 (332)
                      .   ..+..|..+++++...     ..+++|||||.+|++++..||+++++++.+.+.+.
T Consensus       128 ~---p~p~~~~~~l~~l~~~-----~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~  179 (206)
T 1rku_A          128 L---RQKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIRE  179 (206)
T ss_dssp             C---CSSSHHHHHHHHHHHT-----TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHH
T ss_pred             c---CCCchHHHHHHHHHhc-----CCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHH
Confidence            1   2236788888876532     36899999999999999999999998776655443

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.40  E-value=2.4e-11  Score=110.66  Aligned_cols=117  Identities=10%  Similarity=0.115  Sum_probs=85.2

Q ss_pred             CCCHHHHHHHhh-------cCCCChhHHHHHHHHHHcCCCCC--cEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeE
Q 020024          141 GINLEDIKKAGE-------RLSLQDGCTTFFQKVVKNENLNA--NVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFS  209 (332)
Q Consensus       141 G~~~~~l~~~~~-------~i~lrpg~~e~l~~l~~~g~~~~--~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~  209 (332)
                      |++.+++.+...       .+.+.||+.++++.++++|   +  +++|+|.+. ...+...++.+|+..  ..+++.+  
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g---~~~~l~i~Tn~~-~~~~~~~l~~~gl~~~fd~v~~~~--  194 (282)
T 3nuq_A          121 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSG---KIDKLWLFTNAY-KNHAIRCLRLLGIADLFDGLTYCD--  194 (282)
T ss_dssp             SSCHHHHHHHHTTTSCGGGTCCCCHHHHHHHHHHHHSS---SCSEEEEECSSC-HHHHHHHHHHHTCTTSCSEEECCC--
T ss_pred             CCCHHHHHHHHhhhhhhhhccCcChhHHHHHHHHHhCC---CCceEEEEECCC-hHHHHHHHHhCCcccccceEEEec--
Confidence            556666665543       3678999999999999999   9  999999986 889999998888642  1222211  


Q ss_pred             EcCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          210 FKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       210 ~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                              ........+..|...++.++...+.....++++||||.||+.|++.||+++++.
T Consensus       195 --------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~  248 (282)
T 3nuq_A          195 --------YSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH  248 (282)
T ss_dssp             --------CSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             --------cCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence                    000111233447788898998888742279999999999999999999965554

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.37  E-value=3.2e-11  Score=105.35  Aligned_cols=103  Identities=10%  Similarity=0.007  Sum_probs=78.8

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      .....+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.           ..   ...+..
T Consensus        92 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~kp  153 (230)
T 3um9_A           92 YLSLTPFADVPQALQQLRAAG---LKTAILSNGS-RHSIRQVVGNSGLTNSFDHLISV-----------DE---VRLFKP  153 (230)
T ss_dssp             TTSCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEG-----------GG---TTCCTT
T ss_pred             HhcCCCCCCHHHHHHHHHhCC---CeEEEEeCCC-HHHHHHHHHHCCChhhcceeEeh-----------hh---cccCCC
Confidence            346889999999999999999   9999999885 888999998877632  122221           11   112223


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      |...++.++...+.. ..++++||||.||+.|++.|++++++..
T Consensus       154 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~  196 (230)
T 3um9_A          154 HQKVYELAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWIN  196 (230)
T ss_dssp             CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             ChHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEEe
Confidence            567788888888774 5789999999999999999999877653

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.35  E-value=5.4e-11  Score=102.22  Aligned_cols=124  Identities=14%  Similarity=0.120  Sum_probs=84.9

Q ss_pred             CCHHHHHHH-hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceeccc
Q 020024          142 INLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGE  218 (332)
Q Consensus       142 ~~~~~l~~~-~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~  218 (332)
                      +..+.+.+. .+...+.||+.++++.++++|    +++|+|.+. ..++...++.+|+..  ..+++.           .
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----~~~i~s~~~-~~~~~~~l~~~~~~~~f~~~~~~-----------~  135 (200)
T 3cnh_A           72 FTPEDFRAVMEEQSQPRPEVLALARDLGQRY----RMYSLNNEG-RDLNEYRIRTFGLGEFLLAFFTS-----------S  135 (200)
T ss_dssp             SCHHHHHHHHHHTCCBCHHHHHHHHHHTTTS----EEEEEECCC-HHHHHHHHHHHTGGGTCSCEEEH-----------H
T ss_pred             CCHHHHHHHHHhcCccCccHHHHHHHHHHcC----CEEEEeCCc-HHHHHHHHHhCCHHHhcceEEee-----------c
Confidence            344555544 456679999999999998654    899999885 888898888877532  122221           1


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE-cCChhHHHHhHhcCC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI-GSSSSLRRVGSQFGV  285 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~-~~~~~L~~~~~~~~~  285 (332)
                      -.   ..+.-+...++.++...+.. ..++++||||.+|+.+++.|++.++. ..+..+.+..++.|+
T Consensus       136 ~~---~~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~~~g~  199 (200)
T 3cnh_A          136 AL---GVMKPNPAMYRLGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAALGV  199 (200)
T ss_dssp             HH---SCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTC
T ss_pred             cc---CCCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHHHHhcc
Confidence            00   01111345666677777763 47899999999999999999986554 444566666666665

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.34  E-value=3.8e-11  Score=105.22  Aligned_cols=102  Identities=12%  Similarity=0.040  Sum_probs=77.5

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      .....+.||+.++++.++++|   ++++|+|.+. ...+...++.+|+..  ..+++.+              ....+..
T Consensus        95 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp  156 (233)
T 3umb_A           95 YACLSAFPENVPVLRQLREMG---LPLGILSNGN-PQMLEIAVKSAGMSGLFDHVLSVD--------------AVRLYKT  156 (233)
T ss_dssp             HHSCEECTTHHHHHHHHHTTT---CCEEEEESSC-HHHHHHHHHTTTCTTTCSEEEEGG--------------GTTCCTT
T ss_pred             HhcCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHHCCcHhhcCEEEEec--------------ccCCCCc
Confidence            346889999999999999998   9999999885 888999998887642  1222211              1111223


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      |...++.++...+.+ ..++++||||.+|+.|+..||+++++-
T Consensus       157 ~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v  198 (233)
T 3umb_A          157 APAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWI  198 (233)
T ss_dssp             SHHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred             CHHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence            556777777777764 579999999999999999999987774

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.34  E-value=1.1e-11  Score=108.37  Aligned_cols=103  Identities=16%  Similarity=0.143  Sum_probs=77.2

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+...        | +..+++..   ...+..|..
T Consensus        88 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~--------f-~~~~~~~~---~~~~kp~~~  151 (233)
T 3s6j_A           88 HQIIALPGAVELLETLDKEN---LKWCIATSGG-IDTATINLKALKLDIN--------K-INIVTRDD---VSYGKPDPD  151 (233)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CCEEEECSSC-HHHHHHHHHTTTCCTT--------S-SCEECGGG---SSCCTTSTH
T ss_pred             ccCccCCCHHHHHHHHHHCC---CeEEEEeCCc-hhhHHHHHHhcchhhh--------h-heeecccc---CCCCCCChH
Confidence            35789999999999999999   9999999986 8899999988876421        0 11111111   122334677


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      .++.++...+.. ..++++||||.+|+.|++.||+ +|.+.
T Consensus       152 ~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~  191 (233)
T 3s6j_A          152 LFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLL  191 (233)
T ss_dssp             HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEG
T ss_pred             HHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEe
Confidence            888888888774 5789999999999999999998 34443

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.33  E-value=1e-10  Score=103.83  Aligned_cols=111  Identities=10%  Similarity=-0.040  Sum_probs=81.6

Q ss_pred             CHHHHHHH---hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccc
Q 020024          143 NLEDIKKA---GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI  219 (332)
Q Consensus       143 ~~~~l~~~---~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~  219 (332)
                      +.+....+   .....+.||+.++++.+++ +   ++++|+|.+. ...+...++.+|+....+++           +..
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~---~~~~i~s~~~-~~~~~~~l~~~g~~f~~~~~-----------~~~  168 (254)
T 3umc_A          105 DEALLQRITGFWHRLRPWPDTLAGMHALKA-D---YWLAALSNGN-TALMLDVARHAGLPWDMLLC-----------ADL  168 (254)
T ss_dssp             CHHHHHHHHGGGGSCEECTTHHHHHHHHTT-T---SEEEECCSSC-HHHHHHHHHHHTCCCSEECC-----------HHH
T ss_pred             CHHHHHHHHHHHhcCCCCccHHHHHHHHHh-c---CeEEEEeCCC-HHHHHHHHHHcCCCcceEEe-----------ecc
Confidence            44444433   3467889999999999986 4   7999999885 88889998887763111221           111


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                         ...+..|...++.++...+.. ..++++|||+.||+.|++.||+++++...
T Consensus       169 ---~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  218 (254)
T 3umc_A          169 ---FGHYKPDPQVYLGACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIAR  218 (254)
T ss_dssp             ---HTCCTTSHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             ---cccCCCCHHHHHHHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEec
Confidence               122334778888888888874 57999999999999999999998887754

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.31  E-value=8.3e-12  Score=108.09  Aligned_cols=107  Identities=14%  Similarity=0.194  Sum_probs=79.8

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .....+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  .+.+.     .++++.    ...+..|.
T Consensus        66 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~--~f~~~-----~i~~~~----~~~~kp~~  130 (205)
T 3m9l_A           66 AQGSRPAPGAVELVRELAGRG---YRLGILTRNA-RELAHVTLEAIGLAD--CFAEA-----DVLGRD----EAPPKPHP  130 (205)
T ss_dssp             EEEEEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGG--GSCGG-----GEECTT----TSCCTTSS
T ss_pred             hhcCCCCccHHHHHHHHHhcC---CeEEEEeCCc-hHHHHHHHHHcCchh--hcCcc-----eEEeCC----CCCCCCCH
Confidence            456789999999999999999   9999999985 889999998888632  11111     111111    11122355


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ..++.++...+.+ ..++++||||.+|+.|++.||+ +|+++..
T Consensus       131 ~~~~~~~~~~g~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  173 (205)
T 3m9l_A          131 GGLLKLAEAWDVS-PSRMVMVGDYRFDLDCGRAAGTRTVLVNLP  173 (205)
T ss_dssp             HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEECSSS
T ss_pred             HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCEEEEEeCC
Confidence            7788888888774 4789999999999999999998 7888755

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.31  E-value=7.5e-11  Score=104.40  Aligned_cols=102  Identities=13%  Similarity=0.123  Sum_probs=76.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcc
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ...+.++||+.++++.++++|   ++++|+|.+. ...++..++.+|+...  .+++.           ..   ...+..
T Consensus       101 ~~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~---~~~~Kp  162 (240)
T 2no4_A          101 YKELSAYPDAAETLEKLKSAG---YIVAILSNGN-DEMLQAALKASKLDRVLDSCLSA-----------DD---LKIYKP  162 (240)
T ss_dssp             HHTCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEG-----------GG---TTCCTT
T ss_pred             HhcCCCCCCHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHhcCcHHHcCEEEEc-----------cc---cCCCCC
Confidence            346789999999999999999   9999999885 8889999988886421  22221           11   111223


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      |...++.++...+.. ..++++||||.+|+.+++.||+.++.-
T Consensus       163 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v  204 (240)
T 2no4_A          163 DPRIYQFACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRI  204 (240)
T ss_dssp             SHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred             CHHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence            566777777777764 478999999999999999999865543

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.30  E-value=2.4e-11  Score=106.92  Aligned_cols=97  Identities=16%  Similarity=0.081  Sum_probs=74.8

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++           +..   ...+..|
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~~---~~~~kp~  162 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAG---FRLAMATSKV-EKAARAIAELTGLDTRLTVIAG-----------DDS---VERGKPH  162 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTT---EEEEEECSSC-HHHHHHHHHHHTGGGTCSEEEC-----------TTT---SSSCTTS
T ss_pred             cCCccCCCHHHHHHHHHhCC---CcEEEEcCCC-hHHHHHHHHHcCchhheeeEEe-----------CCC---CCCCCCC
Confidence            55789999999999999999   9999999885 888999998877632  11222           111   1223336


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      ...++.++...+.. ..++++||||.||+.|++.||+.
T Consensus       163 ~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~  199 (237)
T 4ex6_A          163 PDMALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGMT  199 (237)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCe
Confidence            67888888888774 47899999999999999999983

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.30  E-value=9.5e-11  Score=102.90  Aligned_cols=101  Identities=14%  Similarity=0.088  Sum_probs=75.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....++||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.+           .   ...+..|
T Consensus        92 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~~~Kp~  153 (232)
T 1zrn_A           92 LRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVD-----------P---VQVYKPD  153 (232)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESG-----------G---GTCCTTS
T ss_pred             ccCCCCccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHhcChHhhhheEEEec-----------c---cCCCCCC
Confidence            45789999999999999999   9999999885 888999998877632  1222211           0   1112225


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ...++.++...+.. ..++++||||.+|+.+++.||+++++.
T Consensus       154 ~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~  194 (232)
T 1zrn_A          154 NRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWI  194 (232)
T ss_dssp             HHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence            56777777777763 478999999999999999999977664

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.28  E-value=5.1e-10  Score=97.92  Aligned_cols=101  Identities=17%  Similarity=0.194  Sum_probs=77.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++ +|   ++++|+|.+. ...++..++.+|+..  ..+++           +.   ....+..|.
T Consensus       105 ~~~~~~~~~~~l~~l~-~g---~~~~i~sn~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~---~~~~~kp~~  165 (240)
T 3qnm_A          105 KSGLMPHAKEVLEYLA-PQ---YNLYILSNGF-RELQSRKMRSAGVDRYFKKIIL-----------SE---DLGVLKPRP  165 (240)
T ss_dssp             CCCBSTTHHHHHHHHT-TT---SEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEE-----------GG---GTTCCTTSH
T ss_pred             cCCcCccHHHHHHHHH-cC---CeEEEEeCCc-hHHHHHHHHHcChHhhceeEEE-----------ec---cCCCCCCCH
Confidence            5789999999999999 88   9999999885 888888888877632  12222           11   111223367


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ..++.++...+.+ ..++++||||. ||+.|++.||+++++.+.
T Consensus       166 ~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~  208 (240)
T 3qnm_A          166 EIFHFALSATQSE-LRESLMIGDSWEADITGAHGVGMHQAFYNV  208 (240)
T ss_dssp             HHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence            7888888888874 57999999995 999999999998776644

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.27  E-value=2.4e-11  Score=105.41  Aligned_cols=101  Identities=16%  Similarity=0.120  Sum_probs=75.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++++.+++.|   ++++|+|.+. ...++..++.+|+...  .+++           +..   ...+..|
T Consensus        91 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~~~~~~~~-----------~~~---~~~~kp~  152 (226)
T 1te2_A           91 ETRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDSFDALAS-----------AEK---LPYSKPH  152 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEE-----------CTT---SSCCTTS
T ss_pred             ccCCcCccHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhcCcHhhCcEEEe-----------ccc---cCCCCCC
Confidence            35788999999999999988   9999999875 7888888888776321  1221           110   0011123


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ...++.++...+.+ ..++++||||.||++|++.||+++++-
T Consensus       153 ~~~~~~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~  193 (226)
T 1te2_A          153 PQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVV  193 (226)
T ss_dssp             THHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             hHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEE
Confidence            57777788777764 478999999999999999999988874

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.27  E-value=1.2e-10  Score=101.49  Aligned_cols=96  Identities=11%  Similarity=0.088  Sum_probs=75.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.           .   ....+..|.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~~  145 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYG---FHLVVATSKP-TVFSKQILEHFKLAFYFDAIVGS-----------S---LDGKLSTKE  145 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEE-----------C---TTSSSCSHH
T ss_pred             cCccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCHhheeeeecc-----------C---CCCCCCCCH
Confidence            4689999999999999999   9999999985 888999998888642  122221           1   112233488


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      ..++.++...+.. ..++++||||.||+.|++.||+.
T Consensus       146 ~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~  181 (226)
T 3mc1_A          146 DVIRYAMESLNIK-SDDAIMIGDREYDVIGALKNNLP  181 (226)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHhCcC-cccEEEECCCHHHHHHHHHCCCC
Confidence            8899899888874 46999999999999999999983

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.27  E-value=4.4e-10  Score=100.57  Aligned_cols=147  Identities=12%  Similarity=0.062  Sum_probs=94.4

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ..+.+.||+.++++.++  |   ++++|+|.+. ...++..++.+|+...  .+++           +..   ...+..|
T Consensus        90 ~~~~~~~~~~~~l~~l~--g---~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~-----------~~~---~~~~Kp~  149 (253)
T 1qq5_A           90 NRLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDSFDAVIS-----------VDA---KRVFKPH  149 (253)
T ss_dssp             GSCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEE-----------GGG---GTCCTTS
T ss_pred             hcCCCCccHHHHHHHHc--C---CCEEEEeCcC-HHHHHHHHHHCCchhhccEEEE-----------ccc---cCCCCCC
Confidence            35789999999999998  7   9999999985 8889999988876321  2222           111   1112235


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC---hhHHHHhHhcCCeeeecCchhhhhhhhhhcCCC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS---SSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSS  306 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~---~~L~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  306 (332)
                      ...++.++...+.. ..++++||||.+|+.+++.||+++++...   ..|.+..+   +-++|...+..+.   .  ...
T Consensus       150 ~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~---~g~~~~~~~~~~~---~--~~~  220 (253)
T 1qq5_A          150 PDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELV---SGTIAPLTMFKAL---R--MRE  220 (253)
T ss_dssp             HHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTT---SSSCCHHHHHHHH---H--SSC
T ss_pred             HHHHHHHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcc---ccccccccccccc---c--ccc
Confidence            56777777777764 47899999999999999999997666544   33333332   3333332211100   0  000


Q ss_pred             CCccccCCEEEEeCCHHHHHHhH
Q 020024          307 SNWKEKSGILYTVSSWAEVHAFI  329 (332)
Q Consensus       307 ~~~~~~~~~ly~~~~W~~i~~~l  329 (332)
                      ..  ...+.-|.+.++.++.++|
T Consensus       221 ~~--~~~~~~~~~~~~~el~~~l  241 (253)
T 1qq5_A          221 ET--YAEAPDFVVPALGDLPRLV  241 (253)
T ss_dssp             CT--TSCCCSEEESSGGGHHHHH
T ss_pred             CC--CCCCCCeeeCCHHHHHHHH
Confidence            00  1123447789999988776

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.27  E-value=2.6e-11  Score=104.05  Aligned_cols=101  Identities=12%  Similarity=0.070  Sum_probs=76.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..++||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.+           .   ...+..|..
T Consensus        88 ~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~-----------~---~~~~kp~~~  149 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQG---LEIGLASSSV-KADIFRALEENRLQGFFDIVLSGE-----------E---FKESKPNPE  149 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG-----------G---CSSCTTSSH
T ss_pred             CCcCchHHHHHHHHHHCC---CCEEEEeCCc-HHHHHHHHHHcCcHhheeeEeecc-----------c---ccCCCCChH
Confidence            468999999999999999   9999999885 889999999888632  1222211           0   111122556


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .++.++...+.. ..++++||||.+|+.|++.||+++++...
T Consensus       150 ~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  190 (214)
T 3e58_A          150 IYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRD  190 (214)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence            777778777764 47899999999999999999997666543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.24  E-value=1.4e-10  Score=100.35  Aligned_cols=112  Identities=10%  Similarity=0.075  Sum_probs=77.9

Q ss_pred             CCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh------cCCCc--ceEEeeeeEE
Q 020024          141 GINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS------AGLNA--LNVHANEFSF  210 (332)
Q Consensus       141 G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~------~g~~~--~~I~aN~l~~  210 (332)
                      +.+.+++.+...  ...+.||+.++++.+++ |   ++++|+|.+. ...+...++.      +|+..  ..+++.+   
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~---  144 (211)
T 2i6x_A           73 ELTYQQVYDALLGFLEEISAEKFDYIDSLRP-D---YRLFLLSNTN-PYVLDLAMSPRFLPSGRTLDSFFDKVYASC---  144 (211)
T ss_dssp             CCCHHHHHHHHGGGEEEECHHHHHHHHHHTT-T---SEEEEEECCC-HHHHHHHTSTTSSTTCCCGGGGSSEEEEHH---
T ss_pred             CCCHHHHHHHHHHhhcccChHHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHhhhccccccCHHHHcCeEEeec---
Confidence            356666655432  35789999999999998 8   9999999885 7888888776      56421  1222211   


Q ss_pred             cCceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          211 KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       211 ~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                              -   ...+..+...++.++...+.. ..++++||||.+|+.+++.||+++++..
T Consensus       145 --------~---~~~~Kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~  194 (211)
T 2i6x_A          145 --------Q---MGKYKPNEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPD  194 (211)
T ss_dssp             --------H---HTCCTTSHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred             --------c---cCCCCCCHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence                    0   011112456777777777764 5799999999999999999999766553

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.23  E-value=1.3e-10  Score=102.76  Aligned_cols=101  Identities=11%  Similarity=0.107  Sum_probs=77.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.           .   ....+..|.
T Consensus       108 ~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~---~~~~~kp~~  169 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNG---KILLVATSKP-TVFAETILRYFDIDRYFKYIAGS-----------N---LDGTRVNKN  169 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEE-----------C---TTSCCCCHH
T ss_pred             ccccCccHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHHcCcHhhEEEEEec-----------c---ccCCCCCCH
Confidence            4689999999999999999   9999999985 889999998888632  122221           1   112233478


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..++.++...+.....++++||||.+|+.|++.||+. +.++
T Consensus       170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  211 (240)
T 3sd7_A          170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVL  211 (240)
T ss_dssp             HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence            8888888888874257999999999999999999984 3344

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.23  E-value=1.4e-10  Score=103.47  Aligned_cols=99  Identities=14%  Similarity=0.185  Sum_probs=73.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.++++|   ++++|+|.+. ...++.+++.+|+...  .+++           +...   ....-|.
T Consensus       112 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~gl~~~f~~~~~-----------~~~~---~~~Kp~~  173 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQG---YILAVVTNKP-TKHVQPILTAFGIDHLFSEMLG-----------GQSL---PEIKPHP  173 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEEC-----------TTTS---SSCTTSS
T ss_pred             cCccCCCHHHHHHHHHHCC---CEEEEEECCc-HHHHHHHHHHcCchheEEEEEe-----------cccC---CCCCcCH
Confidence            4688999999999999999   9999999985 8889999998886421  1221           1100   0011134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ..++.++...+.. ..++++||||.+|+.|++.||++++.
T Consensus       174 ~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~  212 (243)
T 2hsz_A          174 APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVG  212 (243)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence            5666677777763 47899999999999999999997543

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.23  E-value=1.7e-10  Score=101.97  Aligned_cols=112  Identities=13%  Similarity=0.078  Sum_probs=81.7

Q ss_pred             CCHHHHHHHh---hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          142 INLEDIKKAG---ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       142 ~~~~~l~~~~---~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      ++.+.+..+.   ....+.||+.++++.++++    ++++|+|.+. ...++..++.+|+.          |+ .++++.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~~~----------f~-~~~~~~  163 (254)
T 3umg_A          100 HDSGELDELARAWHVLTPWPDSVPGLTAIKAE----YIIGPLSNGN-TSLLLDMAKNAGIP----------WD-VIIGSD  163 (254)
T ss_dssp             SCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH----SEEEECSSSC-HHHHHHHHHHHTCC----------CS-CCCCHH
T ss_pred             CCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC----CeEEEEeCCC-HHHHHHHHHhCCCC----------ee-EEEEcC
Confidence            3555554443   4678899999999999973    7999999874 88888888887753          11 111111


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .   ...+..|...++.++...+.. ..++++||||.||+.|++.||+++++.+.
T Consensus       164 ~---~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  214 (254)
T 3umg_A          164 I---NRKYKPDPQAYLRTAQVLGLH-PGEVMLAAAHNGDLEAAHATGLATAFILR  214 (254)
T ss_dssp             H---HTCCTTSHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             c---CCCCCCCHHHHHHHHHHcCCC-hHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence            1   112223667888888888874 57999999999999999999998877754

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.20  E-value=3.7e-10  Score=96.10  Aligned_cols=101  Identities=14%  Similarity=0.148  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....++||+.++++.++++|   ++++|+|.+. ...+. .++.+++...  .+++..          ..    ..+..+
T Consensus        82 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~-~~~~~~~~~~f~~~~~~~----------~~----~~~Kp~  142 (207)
T 2go7_A           82 AQVVLMPGAREVLAWADESG---IQQFIYTHKG-NNAFT-ILKDLGVESYFTEILTSQ----------SG----FVRKPS  142 (207)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEECSSC-THHHH-HHHHHTCGGGEEEEECGG----------GC----CCCTTS
T ss_pred             ccceeCcCHHHHHHHHHHCC---CeEEEEeCCc-hHHHH-HHHHcCchhheeeEEecC----------cC----CCCCCC
Confidence            35678999999999999998   9999999885 67777 8777776321  122110          00    001112


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ...++.++...+.+ ..++++||||.||+.|++.||++ ++++.
T Consensus       143 ~~~~~~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~~  185 (207)
T 2go7_A          143 PEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLE  185 (207)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSC
T ss_pred             cHHHHHHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEec
Confidence            56667777777764 47899999999999999999997 44543

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.19  E-value=1.6e-10  Score=101.33  Aligned_cols=102  Identities=19%  Similarity=0.301  Sum_probs=76.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.+              ....+..|.
T Consensus       101 ~~~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp~~  162 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENN---ITMAIVSNKN-GERLRSEIHHKNLTHYFDSIIGSG--------------DTGTIKPSP  162 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEET--------------SSSCCTTSS
T ss_pred             cceECcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHCCchhheeeEEccc--------------ccCCCCCCh
Confidence            5789999999999999999   9999999885 889999999888642  1222211              011122245


Q ss_pred             HHHHHHHHHhCCCCCc-eEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKN-LSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~-~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ..++.++...+.. .. ++++||||.+|+.|++.||+ +|.+++.
T Consensus       163 ~~~~~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~  206 (231)
T 3kzx_A          163 EPVLAALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGST  206 (231)
T ss_dssp             HHHHHHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred             HHHHHHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            6777778777774 35 89999999999999999997 5666544

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.19  E-value=5.8e-10  Score=100.65  Aligned_cols=90  Identities=21%  Similarity=0.266  Sum_probs=73.4

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN  234 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~  234 (332)
                      .++||+.++++.++++|   +++.|+|++. ...++..++.+|+..  .+.                 ...+.+|...++
T Consensus       144 ~~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~~--~f~-----------------~~~~~~k~~~~k  200 (280)
T 3skx_A          144 RIRPESREAISKLKAIG---IKCMMLTGDN-RFVAKWVAEELGLDD--YFA-----------------EVLPHEKAEKVK  200 (280)
T ss_dssp             EECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCSE--EEC-----------------SCCGGGHHHHHH
T ss_pred             CCCHhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCChh--HhH-----------------hcCHHHHHHHHH
Confidence            78999999999999999   9999999985 889999998888631  111                 112336888888


Q ss_pred             HHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          235 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       235 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .+...      .++++||||.||++|+..||+||+++..
T Consensus       201 ~~~~~------~~~~~vGD~~nDi~~~~~Ag~~va~~~~  233 (280)
T 3skx_A          201 EVQQK------YVTAMVGDGVNDAPALAQADVGIAIGAG  233 (280)
T ss_dssp             HHHTT------SCEEEEECTTTTHHHHHHSSEEEECSCC
T ss_pred             HHHhc------CCEEEEeCCchhHHHHHhCCceEEecCC
Confidence            77753      3789999999999999999999999864

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.19  E-value=2.4e-10  Score=107.46  Aligned_cols=131  Identities=19%  Similarity=0.309  Sum_probs=83.6

Q ss_pred             CCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEc-------
Q 020024          140 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-------  211 (332)
Q Consensus       140 ~G~~~~~l~~~~~~-i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~-------  211 (332)
                      .|.......+.... ..+++++.++++.+++ |   +++.|+|++. ..++.......++. ..++++.+.++       
T Consensus        87 nGa~i~~~~~~~~~~~~~~~~~~~~l~~l~~-g---~~~~i~t~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  160 (332)
T 1y8a_A           87 AGVKNRDVERIAELSAKFVPDAEKAMATLQE-R---WTPVVISTSY-TQYLRRTASMIGVR-GELHGTEVDFDSIAVPEG  160 (332)
T ss_dssp             TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHT-T---CEEEEEEEEE-HHHHHHHHHHTTCC-SEEEEEBCCGGGCCCCHH
T ss_pred             CCcEEEECCeEeeccCCCHHHHHHHHHHHHc-C---CcEEEEECCc-eEEEcccchhhhhh-hhhcccccchhhhccccc
Confidence            45444333334444 6789999999999998 8   9999999874 56777776665652 23445544322       


Q ss_pred             ---------Cceec-------------------ccccc--cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHh
Q 020024          212 ---------ESIST-------------------GEIIE--KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL  261 (332)
Q Consensus       212 ---------~g~~t-------------------G~~~~--~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l  261 (332)
                               ++..+                   +.+..  ....+.+|...++.+....+   ...++++|||.||++|+
T Consensus       161 ~~k~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~---~~~via~GDs~NDi~ml  237 (332)
T 1y8a_A          161 LREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKG---IDFPVVVGDSISDYKMF  237 (332)
T ss_dssp             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHT---CSSCEEEECSGGGHHHH
T ss_pred             cceeEEecCHHHHhhhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhc---CceEEEEeCcHhHHHHH
Confidence                     11111                   11111  23345678888875443211   02399999999999999


Q ss_pred             hhc----CeeEEEcCChhHHHH
Q 020024          262 LEA----DIGIVIGSSSSLRRV  279 (332)
Q Consensus       262 ~~A----d~gvv~~~~~~L~~~  279 (332)
                      +.|    ++||++++.+.+++.
T Consensus       238 ~~A~~~~g~~vamna~~~lk~~  259 (332)
T 1y8a_A          238 EAARGLGGVAIAFNGNEYALKH  259 (332)
T ss_dssp             HHHHHTTCEEEEESCCHHHHTT
T ss_pred             HHHhhcCCeEEEecCCHHHHhh
Confidence            999    999999555555543

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.18  E-value=7.3e-11  Score=101.60  Aligned_cols=121  Identities=10%  Similarity=0.100  Sum_probs=77.4

Q ss_pred             CCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCc--ceEEeeeeEEcCceec
Q 020024          142 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNA--LNVHANEFSFKESIST  216 (332)
Q Consensus       142 ~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~--~~I~aN~l~~~~g~~t  216 (332)
                      .+.+++.+...  ...+.||+.++++.++++|   ++++|+|.+. ...+...+.. +|+..  ..+++..         
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~~~~~~~l~~~f~~~~~~~---------  142 (206)
T 2b0c_A           76 LSYEQFSHGWQAVFVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQ---------  142 (206)
T ss_dssp             CCHHHHHHHHHTCEEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHH---------
T ss_pred             CCHHHHHHHHHHHhcccCccHHHHHHHHHHCC---CeEEEEECCC-hHHHHHHHHhccChhhheeeEEEec---------
Confidence            45555555433  3688999999999999998   9999999874 4454443333 23211  1222211         


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE-EcCChhHHHHhH
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV-IGSSSSLRRVGS  281 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv-~~~~~~L~~~~~  281 (332)
                        ..+   .+..+...++.++...+.. ..++++||||.+|+.++..||+.++ +..+..+.+..+
T Consensus       143 --~~~---~~Kp~~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~  202 (206)
T 2b0c_A          143 --DLG---MRKPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFA  202 (206)
T ss_dssp             --HHT---CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHHHH
T ss_pred             --ccC---CCCCCHHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHHHHH
Confidence              000   0111335666677777763 4789999999999999999998544 555555555444

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.18  E-value=3.2e-11  Score=106.14  Aligned_cols=101  Identities=12%  Similarity=0.052  Sum_probs=75.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++.+           -   ...+..|.
T Consensus        81 ~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~~  142 (222)
T 2nyv_A           81 YTKPYPEIPYTLEALKSKG---FKLAVVSNKL-EELSKKILDILNLSGYFDLIVGGD-----------T---FGEKKPSP  142 (222)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTT-----------S---SCTTCCTT
T ss_pred             cCccCCCHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCHHHheEEEecC-----------c---CCCCCCCh
Confidence            5789999999999999999   9999999885 888999998888632  1222211           0   11122356


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ..++.++...+.. ..++++||||.+|+.+++.||+. |.+..
T Consensus       143 ~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~  184 (222)
T 2nyv_A          143 TPVLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALW  184 (222)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred             HHHHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence            7777777777763 47899999999999999999986 55553

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.17  E-value=9e-10  Score=99.44  Aligned_cols=100  Identities=14%  Similarity=0.127  Sum_probs=72.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      +.+.||+.++++.++++|   ++++|+|.+- . .+...++.+|+..  ..+++           +.-   ...+.-+..
T Consensus       105 ~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~-~~~~~l~~~gl~~~f~~~~~-----------~~~---~~~~Kp~~~  165 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRG---LRLAVISNFD-R-RLEGILGGLGLREHFDFVLT-----------SEA---AGWPKPDPR  165 (263)
T ss_dssp             EEECTTHHHHHHHHHHTT---CEEEEEESCC-T-THHHHHHHTTCGGGCSCEEE-----------HHH---HSSCTTSHH
T ss_pred             ceECcCHHHHHHHHHhCC---CcEEEEeCCc-H-HHHHHHHhCCcHHhhhEEEe-----------ecc---cCCCCCCHH
Confidence            579999999999999999   9999999753 3 5688888888632  11222           111   111222456


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .++..+...+.. ..++++||||. +|+.|++.||+++++...
T Consensus       166 ~~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~  207 (263)
T 3k1z_A          166 IFQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVG  207 (263)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECC
T ss_pred             HHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcC
Confidence            777777777764 57899999997 999999999997666543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.17  E-value=2.6e-09  Score=93.34  Aligned_cols=102  Identities=14%  Similarity=0.119  Sum_probs=73.9

Q ss_pred             HHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCC
Q 020024          149 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESP  226 (332)
Q Consensus       149 ~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~  226 (332)
                      .......+.||+.++++.++++    ++++|+|.+. ...+...++.+|+..  ..+++.           ..   ...+
T Consensus        94 ~~~~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~~-----------~~---~~~~  154 (234)
T 3u26_A           94 MSQRYGELYPEVVEVLKSLKGK----YHVGMITDSD-TEQAMAFLDALGIKDLFDSITTS-----------EE---AGFF  154 (234)
T ss_dssp             HHHHHCCBCTTHHHHHHHHTTT----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEH-----------HH---HTBC
T ss_pred             HHHhhCCcCcCHHHHHHHHHhC----CcEEEEECCC-HHHHHHHHHHcCcHHHcceeEec-----------cc---cCCC
Confidence            3345688999999999999853    7999999885 788889998887632  122221           11   1112


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEE
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI  270 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~  270 (332)
                      ..|...++.++...+.. ..++++||||. ||+.|++.||+.++.
T Consensus       155 kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~  198 (234)
T 3u26_A          155 KPHPRIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSIL  198 (234)
T ss_dssp             TTSHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred             CcCHHHHHHHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEE
Confidence            23567778888888774 57999999997 999999999975443

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.16  E-value=3.9e-10  Score=95.73  Aligned_cols=100  Identities=15%  Similarity=0.140  Sum_probs=71.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      ..+.||+.++++.++++|   ++++|+|.+  ...+...++.+|+...  +.       ..+++.-   ...+..|...+
T Consensus        81 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~--~~~~~~~l~~~~~~~~--f~-------~~~~~~~---~~~~kp~~~~~  143 (190)
T 2fi1_A           81 PILFEGVSDLLEDISNQG---GRHFLVSHR--NDQVLEILEKTSIAAY--FT-------EVVTSSS---GFKRKPNPESM  143 (190)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEECSS--CTHHHHHHHHTTCGGG--EE-------EEECGGG---CCCCTTSCHHH
T ss_pred             CccCcCHHHHHHHHHHCC---CcEEEEECC--cHHHHHHHHHcCCHhh--ee-------eeeeccc---cCCCCCCHHHH
Confidence            348999999999999998   999999975  3578888888776321  10       0111111   11122356777


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +.++...+..   ++++||||.||+.|++.|+++++....
T Consensus       144 ~~~~~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~~~~  180 (190)
T 2fi1_A          144 LYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLFTS  180 (190)
T ss_dssp             HHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             HHHHHHcCCC---eEEEEcCCHHHHHHHHHcCCeEEEECC
Confidence            7888887763   899999999999999999997665544

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.15  E-value=2.1e-10  Score=101.67  Aligned_cols=104  Identities=15%  Similarity=0.081  Sum_probs=73.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...+...++. |+..  .++++.     ++++.-   ...+..|...
T Consensus       107 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~--~f~~d~-----i~~~~~---~~~~kp~~~~  171 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEG---LTPMVVTGSG-QLSLLERLEH-NFPG--MFHKEL-----MVTAFD---VKYGKPNPEP  171 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTT---CEEEEECCCC-CHHHHTTHHH-HSTT--TCCGGG-----EECTTT---CSSCTTSSHH
T ss_pred             cCCCCCCHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHH-hHHH--hcCcce-----EEeHHh---CCCCCCChHH
Confidence            4688999999999999999   9999999875 6677777776 6532  111111     111111   1122235577


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ++.++...+.. ..++++||||.||+.|++.||++ |.+..
T Consensus       172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~  211 (243)
T 3qxg_A          172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVNT  211 (243)
T ss_dssp             HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEeC
Confidence            77788887764 57999999999999999999985 44443

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.15  E-value=1.9e-10  Score=101.42  Aligned_cols=104  Identities=13%  Similarity=0.097  Sum_probs=71.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...+...++. |+..  .++++.     +.++.-   ...+..|...
T Consensus       106 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~-~l~~--~f~~~~-----~~~~~~---~~~~kp~~~~  170 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEG---LTPMVVTGSG-QTSLLDRLNH-NFPG--IFQANL-----MVTAFD---VKYGKPNPEP  170 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTT---CEEEEECSCC----CHHHHHH-HSTT--TCCGGG-----EECGGG---CSSCTTSSHH
T ss_pred             cCCCCCCHHHHHHHHHHcC---CcEEEEcCCc-hHHHHHHHHh-hHHH--hcCCCe-----EEeccc---CCCCCCCCHH
Confidence            4688999999999999999   9999999885 6777777776 6632  111111     111111   1122235577


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ++.++...+.. ..++++||||.||+.|++.||++ |.+..
T Consensus       171 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~  210 (247)
T 3dv9_A          171 YLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVNT  210 (247)
T ss_dssp             HHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEECC
T ss_pred             HHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEcC
Confidence            78888888774 57899999999999999999985 44443

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.15  E-value=5e-10  Score=100.46  Aligned_cols=104  Identities=13%  Similarity=0.026  Sum_probs=74.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+....       | +.++++..   ...+..|...
T Consensus       109 ~~~~~~~~~~~l~~l~~~g---~~~~i~tn~~-~~~~~~~l~~~~~~~~~-------~-~~~~~~~~---~~~~kp~~~~  173 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQG---IKVGGNTGYG-PGMMAPALIAAKEQGYT-------P-ASTVFATD---VVRGRPFPDM  173 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHHHTTCC-------C-SEEECGGG---SSSCTTSSHH
T ss_pred             cCccCcCHHHHHHHHHHcC---CeEEEEeCCc-hHHHHHHHHhcCcccCC-------C-ceEecHHh---cCCCCCCHHH
Confidence            4789999999999999999   9999999885 78888888776542110       0 11111111   2223346678


Q ss_pred             HHHHHHHhCCCCC-ceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          233 FNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       233 l~~~~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ++.++...+.. . .++++||||.||+.|++.||+. |.+..
T Consensus       174 ~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~  214 (277)
T 3iru_A          174 ALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSC  214 (277)
T ss_dssp             HHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECS
T ss_pred             HHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEec
Confidence            88888888874 4 7899999999999999999974 33443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.15  E-value=5.4e-09  Score=91.05  Aligned_cols=99  Identities=18%  Similarity=0.204  Sum_probs=73.1

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      .+.||+.++++.++++|   ++++|+|.+ .   ...+...++.+|+...  .+++.+          ..    ..+..|
T Consensus        99 ~~~~~~~~~l~~l~~~g---~~~~i~t~~-~~~~~~~~~~~l~~~~l~~~f~~~~~~~----------~~----~~~kp~  160 (235)
T 2om6_A           99 LVLEGTKEALQFVKERG---LKTAVIGNV-MFWPGSYTRLLLERFGLMEFIDKTFFAD----------EV----LSYKPR  160 (235)
T ss_dssp             GBCTTHHHHHHHHHHTT---CEEEEEECC-CSSCHHHHHHHHHHTTCGGGCSEEEEHH----------HH----TCCTTC
T ss_pred             CcCccHHHHHHHHHHCC---CEEEEEcCC-cccchhHHHHHHHhCCcHHHhhhheecc----------cc----CCCCCC
Confidence            46999999999999998   999999976 4   6778888888776321  222210          01    111125


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGS  272 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~  272 (332)
                      ...++.+++..+.+ .+++++||||. ||+.|++.||+++++..
T Consensus       161 ~~~~~~~~~~lgi~-~~~~~~iGD~~~nDi~~a~~aG~~~~~~~  203 (235)
T 2om6_A          161 KEMFEKVLNSFEVK-PEESLHIGDTYAEDYQGARKVGMWAVWIN  203 (235)
T ss_dssp             HHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTSEEEEEC
T ss_pred             HHHHHHHHHHcCCC-ccceEEECCChHHHHHHHHHCCCEEEEEC
Confidence            57777788887774 57999999999 99999999999887743

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.14  E-value=1.3e-10  Score=101.90  Aligned_cols=100  Identities=8%  Similarity=0.011  Sum_probs=69.7

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.||+.++++.++++|   ++++|+|.+- .  +...++.+|+..  ..+++.+           -   ...+..|..
T Consensus        91 ~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~--~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~~~  150 (233)
T 3nas_A           91 EDLLPGIGRLLCQLKNEN---IKIGLASSSR-N--APKILRRLAIIDDFHAIVDPT-----------T---LAKGKPDPD  150 (233)
T ss_dssp             GGSCTTHHHHHHHHHHTT---CEEEECCSCT-T--HHHHHHHTTCTTTCSEECCC-----------------------CC
T ss_pred             CCcCcCHHHHHHHHHHCC---CcEEEEcCch-h--HHHHHHHcCcHhhcCEEeeHh-----------h---CCCCCCChH
Confidence            348999999999999999   9999999862 2  777888877632  1222211           0   011112335


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      .++.++...+.. ..++++||||.||+.|++.||+++++.+..
T Consensus       151 ~~~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~  192 (233)
T 3nas_A          151 IFLTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQG  192 (233)
T ss_dssp             HHHHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC--
T ss_pred             HHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECCc
Confidence            667777777764 579999999999999999999988877553

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.14  E-value=7e-10  Score=99.23  Aligned_cols=103  Identities=14%  Similarity=0.048  Sum_probs=77.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ce-EEeeeeEEcCceecccccccCC-CCc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LN-VHANEFSFKESISTGEIIEKVE-SPI  227 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~-I~aN~l~~~~g~~tG~~~~~~~-~~~  227 (332)
                      ....+.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  .. +++           +..   .. .+.
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~l~~~~l~~~f~~~i~~-----------~~~---~~~~~K  168 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAG---VPFAIGSNSE-RGRLHLKLRVAGLTELAGEHIYD-----------PSW---VGGRGK  168 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHT---CCEEEECSSC-HHHHHHHHHHTTCHHHHCSCEEC-----------GGG---GTTCCT
T ss_pred             ccCCcCccHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHhcChHhhccceEEe-----------Hhh---cCcCCC
Confidence            46789999999999999999   9999999885 889999998887631  11 222           111   11 222


Q ss_pred             chHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          228 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       228 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                      .|...++.++...+.+ ..++++||||.+|+.|++.||++ |.++.+
T Consensus       169 p~~~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g  214 (259)
T 4eek_A          169 PHPDLYTFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLLVP  214 (259)
T ss_dssp             TSSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEECCT
T ss_pred             CChHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEccC
Confidence            3567788888888774 57899999999999999999997 445433

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.14  E-value=4.3e-09  Score=93.09  Aligned_cols=99  Identities=10%  Similarity=0.124  Sum_probs=74.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|   ++++|+|.+. ...+...++.+|+...  .+++           +...   ..+..|.
T Consensus        92 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~-----------~~~~---~~~Kp~~  153 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELG---YELGIITDGN-PVKQWEKILRLELDDFFEHVII-----------SDFE---GVKKPHP  153 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHT---CEEEEEECSC-HHHHHHHHHHTTCGGGCSEEEE-----------GGGG---TCCTTCH
T ss_pred             hCCCCccHHHHHHHHHHCC---CEEEEEECCC-chhHHHHHHHcCcHhhccEEEE-----------eCCC---CCCCCCH
Confidence            4678999999999999999   9999999875 8888889988886421  2222           1111   1122355


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI  270 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~  270 (332)
                      ..++.++...+.. ..++++||||. ||+.|++.||++++.
T Consensus       154 ~~~~~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~  193 (241)
T 2hoq_A          154 KIFKKALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW  193 (241)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence            7777788777764 47899999998 999999999996554

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.14  E-value=7.1e-10  Score=95.87  Aligned_cols=100  Identities=14%  Similarity=0.081  Sum_probs=74.3

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++++.+++.|   ++++|+|.+. ...+...++.+|+...  .+++           +..   ...+..|
T Consensus        86 ~~~~~~~~~~~~l~~l~~~g---~~~~i~s~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~~~k~~  147 (225)
T 3d6j_A           86 ANTILFPDTLPTLTHLKKQG---IRIGIISTKY-RFRILSFLRNHMPDDWFDIIIG-----------GED---VTHHKPD  147 (225)
T ss_dssp             GGCEECTTHHHHHHHHHHHT---CEEEEECSSC-HHHHHHHHHTSSCTTCCSEEEC-----------GGG---CSSCTTS
T ss_pred             ccCccCcCHHHHHHHHHHCC---CeEEEEECCC-HHHHHHHHHHcCchhheeeeee-----------hhh---cCCCCCC
Confidence            35678899999999999998   9999999884 7888888888776321  1221           111   1111234


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ...+..++...+.+ ..++++||||.||+.|++.||+++++
T Consensus       148 ~~~~~~~~~~~~~~-~~~~i~iGD~~nDi~~~~~aG~~~~~  187 (225)
T 3d6j_A          148 PEGLLLAIDRLKAC-PEEVLYIGDSTVDAGTAAAAGVSFTG  187 (225)
T ss_dssp             THHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             hHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence            56777777777764 47899999999999999999997766

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.12  E-value=3.1e-09  Score=92.78  Aligned_cols=104  Identities=16%  Similarity=0.210  Sum_probs=73.2

Q ss_pred             hcCCCChhHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          152 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ....+.||+.++++.++++ |   +++.|+|.+. ...+...++.+|+...  +.       ...++.-.  ...+..+.
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~~--f~-------~~~~~~~~--~~~~k~~~  154 (234)
T 2hcf_A           90 EDITLLEGVRELLDALSSRSD---VLLGLLTGNF-EASGRHKLKLPGIDHY--FP-------FGAFADDA--LDRNELPH  154 (234)
T ss_dssp             GGEEECTTHHHHHHHHHTCTT---EEEEEECSSC-HHHHHHHHHTTTCSTT--CS-------CEECTTTC--SSGGGHHH
T ss_pred             CCCCcCCCHHHHHHHHHhCCC---ceEEEEcCCc-HHHHHHHHHHCCchhh--cC-------cceecCCC--cCccchHH
Confidence            3467899999999999998 8   9999999985 8888888988876421  11       01111100  00111234


Q ss_pred             HHHHHHHHHhC--CCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYG--TDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~--~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..++.++...+  . ...++++||||.||+.|++.||++ +.+.
T Consensus       155 ~~~~~~~~~lg~~~-~~~~~i~iGD~~~Di~~a~~aG~~~i~v~  197 (234)
T 2hcf_A          155 IALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDARSIAVA  197 (234)
T ss_dssp             HHHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCEEEEEC
T ss_pred             HHHHHHHHHhCCCC-CcccEEEECCCHHHHHHHHHCCCcEEEEc
Confidence            56677777777  4 357999999999999999999986 4444

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.12  E-value=2e-10  Score=102.24  Aligned_cols=104  Identities=11%  Similarity=0.118  Sum_probs=71.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCc--ceEEeeeeEEcCceecccccccCCCCcc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNA--LNVHANEFSFKESISTGEIIEKVESPID  228 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~  228 (332)
                      ....+.||+.++++.++++|   ++++|+|.+. ...+...+.. .|+..  ..+++           +.- .....+..
T Consensus       109 ~~~~~~~~~~~~l~~l~~~g---~~~~i~sn~~-~~~~~~~l~~~~~l~~~f~~~~~-----------~~~-~~~~~~Kp  172 (250)
T 3l5k_A          109 PTAALMPGAEKLIIHLRKHG---IPFALATSSR-SASFDMKTSRHKEFFSLFSHIVL-----------GDD-PEVQHGKP  172 (250)
T ss_dssp             GGCCBCTTHHHHHHHHHHTT---CCEEEECSCC-HHHHHHHTTTCHHHHTTSSCEEC-----------TTC-TTCCSCTT
T ss_pred             ccCCCCCCHHHHHHHHHhCC---CcEEEEeCCC-HHHHHHHHHhccCHHhheeeEEe-----------cch-hhccCCCC
Confidence            46789999999999999999   9999999885 6677666543 23211  11221           110 01112223


Q ss_pred             hHHHHHHHHHHhCCCC-CceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          229 KVQAFNNTLEKYGTDR-KNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~-~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      |...++.++...+... ..++++||||.+|+.|++.||+.++.-
T Consensus       173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v  216 (250)
T 3l5k_A          173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMV  216 (250)
T ss_dssp             STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence            5567788888777632 279999999999999999999865553

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.12  E-value=6e-09  Score=92.73  Aligned_cols=95  Identities=13%  Similarity=0.117  Sum_probs=72.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++ +|   +++.|+|.+. ...+...++.+|+..  ..+++          .+         ..+.
T Consensus       110 ~~~~~~~~~~~l~~l~-~~---~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~i~~----------~~---------kp~~  165 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-AD---YAVVLITKGD-LFHQEQKIEQSGLSDLFPRIEV----------VS---------EKDP  165 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TT---SEEEEEEESC-HHHHHHHHHHHSGGGTCCCEEE----------ES---------CCSH
T ss_pred             cCCcCccHHHHHHHHH-CC---CEEEEEeCCC-HHHHHHHHHHcCcHHhCceeee----------eC---------CCCH
Confidence            5788999999999999 88   9999999885 778888888777532  12222          01         1145


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGS  272 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~  272 (332)
                      ..++.++...+.. ..++++||||. ||+.|++.||++++.-.
T Consensus       166 ~~~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~  207 (251)
T 2pke_A          166 QTYARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTP  207 (251)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECC
T ss_pred             HHHHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEEC
Confidence            6667777777764 47999999999 99999999999876553

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.11  E-value=6.3e-10  Score=97.94  Aligned_cols=116  Identities=13%  Similarity=0.048  Sum_probs=77.1

Q ss_pred             CCHHHHHHHhhc--CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHH------HhcCCCc--ceEEeeeeEEc
Q 020024          142 INLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASF------SSAGLNA--LNVHANEFSFK  211 (332)
Q Consensus       142 ~~~~~l~~~~~~--i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l------~~~g~~~--~~I~aN~l~~~  211 (332)
                      .+.+++.+....  ..+.||+.++++.++++    ++++|+|.+. ...+..++      +..|+..  ..+++.     
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~~~i~Sn~~-~~~~~~~~~~l~~~~~~~l~~~fd~i~~~-----  166 (229)
T 4dcc_A           97 VSDKQIDAAWNSFLVDIPTYKLDLLLKLREK----YVVYLLSNTN-DIHWKWVCKNAFPYRTFKVEDYFEKTYLS-----  166 (229)
T ss_dssp             CCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT----SEEEEEECCC-HHHHHHHHHHTSCBTTBCHHHHCSEEEEH-----
T ss_pred             CCHHHHHHHHHHHHHhccHHHHHHHHHHHhc----CcEEEEECCC-hHHHHHHHhhhhhhccCCHHHhCCEEEee-----
Confidence            567777766553  36789999999999853    7999999885 77777555      4444311  112211     


Q ss_pred             CceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhHH
Q 020024          212 ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLR  277 (332)
Q Consensus       212 ~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L~  277 (332)
                            .-   ...+--+...++.++...+.. ..++++||||.+|+.+++.||++++.. ++..++
T Consensus       167 ------~~---~~~~KP~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k  223 (229)
T 4dcc_A          167 ------YE---MKMAKPEPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKAGEDWS  223 (229)
T ss_dssp             ------HH---HTCCTTCHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred             ------cc---cCCCCCCHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence                  10   011111346777778777774 579999999999999999999965544 443333

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.11  E-value=5.8e-10  Score=96.98  Aligned_cols=98  Identities=11%  Similarity=0.031  Sum_probs=72.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|   +++.|+|.+. ...+...++.+|+...  .+++.     +.  .|       .+--+.
T Consensus        82 ~~~~~pg~~~~l~~L~~~g---~~~~i~tn~~-~~~~~~~l~~~~l~~~fd~~~~~-----~~--~~-------~~KP~p  143 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKR---IKLALATSTP-QREALERLRRLDLEKYFDVMVFG-----DQ--VK-------NGKPDP  143 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECG-----GG--SS-------SCTTST
T ss_pred             hcccCccHHHHHHHHHHcC---CCcccccCCc-HHHHHHHHHhcCCCccccccccc-----cc--cC-------CCcccH
Confidence            4688999999999999999   9999999885 8889999988886421  22221     10  01       011133


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ..++..+.+.+.. ..+++|||||.+|+.+++.||+..+
T Consensus       144 ~~~~~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i  181 (216)
T 3kbb_A          144 EIYLLVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERI  181 (216)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCE
T ss_pred             HHHHHHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEE
Confidence            5566667777764 5799999999999999999998533

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.09  E-value=3.8e-10  Score=97.54  Aligned_cols=100  Identities=18%  Similarity=0.274  Sum_probs=72.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch--
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K--  229 (332)
                      ....+.||+.++++.+++   . ++++|+|.+. ...++..++.+|+...  +.       .++++.     ..+..|  
T Consensus        80 ~~~~~~~~~~~~l~~l~~---~-~~~~i~s~~~-~~~~~~~l~~~~l~~~--f~-------~~~~~~-----~~~~~KP~  140 (209)
T 2hdo_A           80 DQIELYPGITSLFEQLPS---E-LRLGIVTSQR-RNELESGMRSYPFMMR--MA-------VTISAD-----DTPKRKPD  140 (209)
T ss_dssp             GGCEECTTHHHHHHHSCT---T-SEEEEECSSC-HHHHHHHHTTSGGGGG--EE-------EEECGG-----GSSCCTTS
T ss_pred             ccCCcCCCHHHHHHHHHh---c-CcEEEEeCCC-HHHHHHHHHHcChHhh--cc-------EEEecC-----cCCCCCCC
Confidence            457899999999999874   2 7999999885 8889999988775321  10       111111     112345  


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ...++.++...+.. ..++++||||.+|+.|++.||+++++.
T Consensus       141 ~~~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~  181 (209)
T 2hdo_A          141 PLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLA  181 (209)
T ss_dssp             SHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred             cHHHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEE
Confidence            56777777777763 578999999999999999999987764

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.09  E-value=7.9e-10  Score=101.31  Aligned_cols=116  Identities=15%  Similarity=0.143  Sum_probs=78.8

Q ss_pred             CCChhHHHHHHHHHHc-CCCCCcEEEEccc---------------------cCHHHHHHHHHhcCCCcceEEeeeeEEc-
Q 020024          155 SLQDGCTTFFQKVVKN-ENLNANVHVLSYC---------------------WCGDLIRASFSSAGLNALNVHANEFSFK-  211 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~-g~~~~~~~IvS~g---------------------~s~~~I~~~l~~~g~~~~~I~aN~l~~~-  211 (332)
                      ..++++.++++.++++ |   ..+.+.|..                     . ...+...++.+|+. ..+..+..... 
T Consensus       122 ~~~~~v~e~l~~l~~~~g---~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~g~~-~~~~~~~~~~~~  196 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHN---ILLNPQTQLGKSRYKHNFYYQEQDEINDKKN-LLAIEKICEEYGVS-VNINRCNPLAGD  196 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSS---CCCEEGGGTCGGGTTCCEEEECCCHHHHHHH-HHHHHHHHHHHTEE-EEEEECCGGGTC
T ss_pred             CCHHHHHHHHHHHHhhhC---ceeeecccccccceEEEEEEeccccccchHH-HHHHHHHHHHcCCC-EEEEEccccccC
Confidence            6778999999999987 7   888887754                     2 35566667666642 12222211000 


Q ss_pred             -CceecccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh-hHHHH
Q 020024          212 -ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS-SLRRV  279 (332)
Q Consensus       212 -~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~-~L~~~  279 (332)
                       ++..++.+.   ..+..|...++.++...+.. ..++++||||.||++|+..|+++++++... .+++.
T Consensus       197 ~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~  262 (289)
T 3gyg_A          197 PEDSYDVDFI---PIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNL  262 (289)
T ss_dssp             CTTEEEEEEE---ESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHH
T ss_pred             CCCceEEEEE---eCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHh
Confidence             022222222   24557999999999888874 478999999999999999999999997653 44443

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.08  E-value=1.6e-09  Score=96.24  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=74.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC-cceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~-~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ...+.||+.++++.++++|   +++.|+|.+. ...++..++.+|+. ...+++.+     .         ...+..|..
T Consensus       108 ~~~~~~g~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~l~~f~~~~~~~-----~---------~~~~Kp~p~  169 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKG---VKLAVVSNKP-NEAVQVLVEELFPGSFDFALGEK-----S---------GIRRKPAPD  169 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHSTTTCSEEEEEC-----T---------TSCCTTSSH
T ss_pred             cCCcCCCHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCcceeEEEecC-----C---------CCCCCCCHH
Confidence            4678899999999999999   9999999885 78888888887753 11233321     0         111223556


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .+...+...+.. ..++++||||.+|+.+++.||+. |.+.
T Consensus       170 ~~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~  209 (240)
T 2hi0_A          170 MTSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVN  209 (240)
T ss_dssp             HHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred             HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEC
Confidence            777777777764 57999999999999999999984 3344

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.08  E-value=4.5e-10  Score=97.19  Aligned_cols=102  Identities=11%  Similarity=0.081  Sum_probs=72.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.+++.|   +++.|+|.+   ..+...++.+|+...  +       +..+++..   ...+..|...
T Consensus        89 ~~~~~~~~~~~l~~l~~~g---~~~~i~t~~---~~~~~~l~~~~l~~~--f-------~~~~~~~~---~~~~Kp~~~~  150 (221)
T 2wf7_A           89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--F-------DAIADPAE---VAASKPAPDI  150 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTT---CEEEECCCC---TTHHHHHHHTTCGGG--C-------SEECCTTT---SSSCTTSSHH
T ss_pred             CCCCCCCHHHHHHHHHHCC---CeEEEEcCc---HHHHHHHHHcChHHH--c-------ceEecccc---CCCCCCChHH
Confidence            3578899999999999988   999999975   456677777665321  0       11111111   1111123457


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++.++...+.. ..++++||||.||+.|++.||+++++.+.
T Consensus       151 ~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~  190 (221)
T 2wf7_A          151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             HHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEECC
Confidence            77777777764 57999999999999999999999887755

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.07  E-value=1.2e-08  Score=88.55  Aligned_cols=97  Identities=11%  Similarity=0.044  Sum_probs=74.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|.  ++++|+|.+. ...+...++.+|+...  .+++                   .+..|.
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~--~~~~i~t~~~-~~~~~~~l~~~~~~~~f~~~~~-------------------~~kpk~  160 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGK--YKLVVATKGD-LLDQENKLERSGLSPYFDHIEV-------------------MSDKTE  160 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCC--CEEEEEEESC-HHHHHHHHHHHTCGGGCSEEEE-------------------ESCCSH
T ss_pred             cCCcCccHHHHHHHHHhCCC--eEEEEEeCCc-hHHHHHHHHHhCcHhhhheeee-------------------cCCCCH
Confidence            46899999999999997531  6899999774 7788888888776321  1221                   112377


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGS  272 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~  272 (332)
                      ..++.++...+.. ..++++||||. ||+.|++.|++++++-+
T Consensus       161 ~~~~~~~~~lgi~-~~~~i~iGD~~~~Di~~a~~aG~~~v~v~  202 (234)
T 3ddh_A          161 KEYLRLLSILQIA-PSELLMVGNSFKSDIQPVLSLGGYGVHIP  202 (234)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHTCEEEECC
T ss_pred             HHHHHHHHHhCCC-cceEEEECCCcHHHhHHHHHCCCeEEEec
Confidence            8888888888874 57999999996 99999999999877653

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.03  E-value=9.8e-09  Score=89.52  Aligned_cols=105  Identities=13%  Similarity=0.063  Sum_probs=69.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++++.+++ |   ++++|+|.+. ...+...++.++.....+++..          .+...-+...-...
T Consensus        96 ~~~~~~~~~~~~l~~l~~-~---~~~~i~tn~~-~~~~~~~l~~l~~~fd~i~~~~----------~~~~~KP~~~~~~~  160 (240)
T 3smv_A           96 KNWPAFPDTVEALQYLKK-H---YKLVILSNID-RNEFKLSNAKLGVEFDHIITAQ----------DVGSYKPNPNNFTY  160 (240)
T ss_dssp             GGCCBCTTHHHHHHHHHH-H---SEEEEEESSC-HHHHHHHHTTTCSCCSEEEEHH----------HHTSCTTSHHHHHH
T ss_pred             hcCCCCCcHHHHHHHHHh-C---CeEEEEeCCC-hhHHHHHHHhcCCccCEEEEcc----------ccCCCCCCHHHHHH
Confidence            457899999999999998 7   8999999875 7788887776432112233221          11100011111123


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +++. +...+.. ..++++||||. +|+.|++.||+++++...
T Consensus       161 ~l~~-~~~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~  201 (240)
T 3smv_A          161 MIDA-LAKAGIE-KKDILHTAESLYHDHIPANDAGLVSAWIYR  201 (240)
T ss_dssp             HHHH-HHHTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred             HHHH-HHhcCCC-chhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence            4443 5666663 57999999996 999999999998776543

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.02  E-value=6.3e-10  Score=96.94  Aligned_cols=93  Identities=11%  Similarity=0.082  Sum_probs=72.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.+++ |   +++.|+|.+. ...++..++.+|+..  ..|++.+         +       .+..|.
T Consensus        82 ~~~~~~g~~~~l~~L~~-~---~~l~i~T~~~-~~~~~~~l~~~gl~~~f~~i~~~~---------~-------~~Kp~p  140 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-S---YPLYITTTKD-TSTAQDMAKNLEIHHFFDGIYGSS---------P-------EAPHKA  140 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-T---SCEEEEEEEE-HHHHHHHHHHTTCGGGCSEEEEEC---------S-------SCCSHH
T ss_pred             CCCCCCCHHHHHHHHHc-C---CeEEEEeCCC-HHHHHHHHHhcCchhheeeeecCC---------C-------CCCCCh
Confidence            36789999999999998 8   9999999885 778888898888642  1233221         1       122377


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      ..++..+++.+.. ..++++||||.+|+.+++.||+.
T Consensus       141 ~~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~  176 (210)
T 2ah5_A          141 DVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQ  176 (210)
T ss_dssp             HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCc
Confidence            8888888888774 57899999999999999999984

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.02  E-value=3.6e-08  Score=86.03  Aligned_cols=102  Identities=16%  Similarity=0.178  Sum_probs=73.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++    ++++|+|.+. ...++..++.+|+...  +       +..+++..   ...+..|...
T Consensus       101 ~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~--f-------~~~~~~~~---~~~~kp~~~~  163 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ----FDLYIVTNGV-SHTQYKRLRDSGLFPF--F-------KDIFVSED---TGFQKPMKEY  163 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT----SEEEEEECSC-HHHHHHHHHHTTCGGG--C-------SEEEEGGG---TTSCTTCHHH
T ss_pred             cCCCCccHHHHHHHHHhc----CeEEEEeCCC-HHHHHHHHHHcChHhh--h-------heEEEecc---cCCCCCChHH
Confidence            578999999999999853    7999999885 8888889988776421  0       11111111   1122336778


Q ss_pred             HHHHHHHhC-CCCCceEEEEeCCc-cchHHhhhcCeeEE-EcC
Q 020024          233 FNNTLEKYG-TDRKNLSVYIGDSV-GDLLCLLEADIGIV-IGS  272 (332)
Q Consensus       233 l~~~~~~~~-~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv-~~~  272 (332)
                      ++.++...+ .+ ..++++||||. +|+.|++.||++++ ++.
T Consensus       164 ~~~~~~~~g~~~-~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~  205 (238)
T 3ed5_A          164 FNYVFERIPQFS-AEHTLIIGDSLTADIKGGQLAGLDTCWMNP  205 (238)
T ss_dssp             HHHHHHTSTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred             HHHHHHHcCCCC-hhHeEEECCCcHHHHHHHHHCCCEEEEECC
Confidence            888888877 63 57999999998 99999999999544 443

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.00  E-value=9.8e-09  Score=91.98  Aligned_cols=101  Identities=13%  Similarity=0.070  Sum_probs=72.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++++.++++|   +++.|+|.+. ...+...++.+|+..  .+.      +...++..   ...+..|..
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g---~~~~i~t~~~-~~~~~~~l~~~~~~~--~~~------~~~~~~~~---~~~~kp~~~  164 (267)
T 1swv_A          100 RYASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQG--YKP------DFLVTPDD---VPAGRPYPW  164 (267)
T ss_dssp             GGCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTT--CCC------SCCBCGGG---SSCCTTSSH
T ss_pred             cccccCccHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCcc--cCh------HheecCCc---cCCCCCCHH
Confidence            35678999999999999988   9999999874 778888887655321  000      11222211   112334667


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      .+..++...+.....++++||||.||+.|++.||++
T Consensus       165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~  200 (267)
T 1swv_A          165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW  200 (267)
T ss_dssp             HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred             HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCE
Confidence            788888888874226899999999999999999974

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.99  E-value=3.3e-09  Score=96.40  Aligned_cols=101  Identities=15%  Similarity=0.059  Sum_probs=74.0

Q ss_pred             hcCCCChhHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          152 ERLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ....+.||+.++++.++++ |   ++++|+|.+. ...+...++.+|+...          +...++.-   ...+..|.
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g---~~l~i~T~~~-~~~~~~~l~~~~l~~f----------~~i~~~~~---~~~~kp~~  173 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPK---EKWAVATSGT-RDMAKKWFDILKIKRP----------EYFITAND---VKQGKPHP  173 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCG---GGEEEECSSC-HHHHHHHHHHHTCCCC----------SSEECGGG---CSSCTTSS
T ss_pred             cCCCcCcCHHHHHHHHHhccC---CeEEEEeCCC-HHHHHHHHHHcCCCcc----------CEEEEccc---CCCCCCCh
Confidence            4567899999999999988 8   9999999885 7888888888775311          11111111   11122355


Q ss_pred             HHHHHHHHHhCC-------CCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          231 QAFNNTLEKYGT-------DRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       231 ~~l~~~~~~~~~-------~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ..++.++...+.       . ..++++||||.||+.|++.||+++++
T Consensus       174 ~~~~~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~  219 (275)
T 2qlt_A          174 EPYLKGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVG  219 (275)
T ss_dssp             HHHHHHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEE
Confidence            667777777776       4 47899999999999999999987665

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=98.98  E-value=3.8e-09  Score=91.97  Aligned_cols=103  Identities=15%  Similarity=0.190  Sum_probs=72.4

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCC--cch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESP--IDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~--~~K  229 (332)
                      ..+.+.||+.++++.++      .+++|+|.+. ...+...++.+|+...  +      ++..+++...   ..+  ..|
T Consensus        84 ~~~~~~~~~~~~l~~l~------~~~~i~s~~~-~~~~~~~l~~~~l~~~--~------~~~~~~~~~~---~~~~~kpk  145 (229)
T 2fdr_A           84 RDVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--F------APHIYSAKDL---GADRVKPK  145 (229)
T ss_dssp             HHCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--T------TTCEEEHHHH---CTTCCTTS
T ss_pred             cCCccCcCHHHHHHHhC------CCEEEEECCC-hhHHHHHHHhCChHHh--c------cceEEecccc---ccCCCCcC
Confidence            35778999999988765      4899999884 7888888888776320  0      0111111111   112  346


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                      ...++.++...+.. ..++++||||.||+.|++.||++ +.++..
T Consensus       146 ~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~  189 (229)
T 2fdr_A          146 PDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGA  189 (229)
T ss_dssp             SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecC
Confidence            67888888888774 47999999999999999999997 556544

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.97  E-value=2.8e-08  Score=86.58  Aligned_cols=94  Identities=15%  Similarity=0.143  Sum_probs=66.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++    ++++|+|.+. ..     ++.+|+..  ..+++.           ..   ...+..|.
T Consensus       103 ~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~-----l~~~~l~~~f~~~~~~-----------~~---~~~~kp~~  158 (230)
T 3vay_A          103 QVQIFPEVQPTLEILAKT----FTLGVITNGN-AD-----VRRLGLADYFAFALCA-----------ED---LGIGKPDP  158 (230)
T ss_dssp             CCCBCTTHHHHHHHHHTT----SEEEEEESSC-CC-----GGGSTTGGGCSEEEEH-----------HH---HTCCTTSH
T ss_pred             cCccCcCHHHHHHHHHhC----CeEEEEECCc-hh-----hhhcCcHHHeeeeEEc-----------cc---cCCCCcCH
Confidence            578999999999999863    7999999874 32     45555531  122221           10   11122356


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~  271 (332)
                      ..++.++...+.. ..++++|||+. +|+.|++.||++++.-
T Consensus       159 ~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v  199 (230)
T 3vay_A          159 APFLEALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWY  199 (230)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEE
Confidence            7788888888774 57999999998 9999999999976654

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=98.95  E-value=1.1e-07  Score=85.91  Aligned_cols=100  Identities=16%  Similarity=0.213  Sum_probs=71.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ..+.+.||+.++++.+++ +   ++++|+|.+. ...+...++.+|+...  .|++           +.-   ...+--+
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~---~~l~i~Tn~~-~~~~~~~l~~~gl~~~f~~i~~-----------~~~---~~~~KP~  178 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-E---VRLLLLTNGD-RQTQREKIEACACQSYFDAIVI-----------GGE---QKEEKPA  178 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-T---SEEEEEECSC-HHHHHHHHHHHTCGGGCSEEEE-----------GGG---SSSCTTC
T ss_pred             hcCCCCcCHHHHHHHHHc-C---CcEEEEECcC-hHHHHHHHHhcCHHhhhheEEe-----------cCC---CCCCCCC
Confidence            357899999999999986 5   8999999885 8888899988887421  2222           110   0011113


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCe--eEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI--GIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~--gvv~~  271 (332)
                      ...+...+...+.. ..++++|||| .+|+.++..||+  .|.+.
T Consensus       179 p~~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~  222 (260)
T 2gfh_A          179 PSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN  222 (260)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence            46677777777764 4799999996 999999999998  35554

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.94  E-value=6.8e-09  Score=89.25  Aligned_cols=103  Identities=12%  Similarity=0.131  Sum_probs=72.9

Q ss_pred             HHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccC
Q 020024          146 DIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKV  223 (332)
Q Consensus       146 ~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~  223 (332)
                      .+.+......+.||+.+ ++.++++    ++++|+|.+. ...++..++.+|+..  ..+++.           .-.   
T Consensus        65 ~~~~~~~~~~~~~~~~~-l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~~l~~~f~~~~~~-----------~~~---  124 (201)
T 2w43_A           65 EELNKWKNLKAYEDTKY-LKEISEI----AEVYALSNGS-INEVKQHLERNGLLRYFKGIFSA-----------ESV---  124 (201)
T ss_dssp             HHHHHHHTCEECGGGGG-HHHHHHH----SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEG-----------GGG---
T ss_pred             HHHHhhcccccCCChHH-HHHHHhC----CeEEEEeCcC-HHHHHHHHHHCCcHHhCcEEEeh-----------hhc---
Confidence            33344446789999999 9999864    6999999885 888999998888632  122221           110   


Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      ..+..|...++.++...+   ..++++||||.+|+.++..|++++++-
T Consensus       125 ~~~Kp~~~~~~~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~  169 (201)
T 2w43_A          125 KEYKPSPKVYKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFV  169 (201)
T ss_dssp             TCCTTCHHHHHHHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCHHHHHHHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEE
Confidence            011124666777777766   368999999999999999999976553

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.92  E-value=5.3e-09  Score=92.36  Aligned_cols=92  Identities=12%  Similarity=0.030  Sum_probs=63.4

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .....+.||+.++++.|+++|    +++|+|.+. ...++..++.+|+..  .      |+.....         +..|.
T Consensus        92 ~~~~~~~~g~~~~l~~l~~~g----~~~i~Tn~~-~~~~~~~l~~~gl~~--~------f~~~~~~---------~~~K~  149 (231)
T 2p11_A           92 PFASRVYPGALNALRHLGARG----PTVILSDGD-VVFQPRKIARSGLWD--E------VEGRVLI---------YIHKE  149 (231)
T ss_dssp             CGGGGBCTTHHHHHHHHHTTS----CEEEEEECC-SSHHHHHHHHTTHHH--H------TTTCEEE---------ESSGG
T ss_pred             HHhCCcCccHHHHHHHHHhCC----CEEEEeCCC-HHHHHHHHHHcCcHH--h------cCeeEEe---------cCChH
Confidence            345789999999999999765    799999885 788999998877531  0      1110001         12343


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCcc---chHHhhhcCee
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVG---DLLCLLEADIG  267 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~---Dl~~l~~Ad~g  267 (332)
                      ..++.+..  +. ...+++|||||.+   |+.++..||+.
T Consensus       150 ~~~~~~~~--~~-~~~~~~~vgDs~~d~~di~~A~~aG~~  186 (231)
T 2p11_A          150 LMLDQVME--CY-PARHYVMVDDKLRILAAMKKAWGARLT  186 (231)
T ss_dssp             GCHHHHHH--HS-CCSEEEEECSCHHHHHHHHHHHGGGEE
T ss_pred             HHHHHHHh--cC-CCceEEEEcCccchhhhhHHHHHcCCe
Confidence            44444443  22 2478999999999   88888889874

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.92  E-value=2.6e-09  Score=90.64  Aligned_cols=106  Identities=12%  Similarity=0.133  Sum_probs=72.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCH---------------HHHHHHHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~---------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      +.+.||+.++|+.|+++|   ++++|+|.+- .               ..+...++.+|.....++.......+.     
T Consensus        26 ~~~~~g~~~~l~~L~~~g---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-----   96 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQAD---WTVVLATNQS-GLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDG-----   96 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEEEECT-TTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSC-----
T ss_pred             ceECcCHHHHHHHHHHCC---CEEEEEECCC-ccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCC-----
Confidence            578999999999999999   9999999873 3               566777877772113333211100010     


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                          +..+.-+...++..+...+.+ ..+++|||||.+|+.++..||+. |.+..+
T Consensus        97 ----~~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g  147 (179)
T 3l8h_A           97 ----CACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG  147 (179)
T ss_dssp             ----CSSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence                111112346677777777764 47899999999999999999983 445543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.42  E-value=1.6e-10  Score=105.31  Aligned_cols=93  Identities=20%  Similarity=0.268  Sum_probs=72.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...++||+.++++.|+++|   ++++|+|++. ...++.+++.+|+.  ++++.-            .     +..|...
T Consensus       134 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~f~~~------------~-----p~~k~~~  190 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEG---LKIIILSGDK-EDKVKELSKELNIQ--EYYSNL------------S-----PEDKVRI  190 (263)
Confidence            4679999999999999999   9999999985 78888888887763  222211            0     2357777


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++++...     +.++++||||.||++++..||+|++++..
T Consensus       191 ~~~l~~~-----~~~~~~VGD~~~D~~aa~~Agv~va~g~~  226 (263)
T 2yj3_A          191 IEKLKQN-----GNKVLMIGDGVNDAAALALADVSVAMGNG  226 (263)
Confidence            7765432     35899999999999999999999888754

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.89  E-value=2.6e-08  Score=90.32  Aligned_cols=57  Identities=26%  Similarity=0.461  Sum_probs=47.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ...+..|...++.+++..+.+ ..++++||||.||++|++.|++||+++.. +.+++.|
T Consensus       192 ~~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  249 (279)
T 4dw8_A          192 VPQGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAA  249 (279)
T ss_dssp             ECTTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred             ecCCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhC
Confidence            344668999999999998874 47899999999999999999999999855 4555544

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=98.84  E-value=3.3e-08  Score=86.41  Aligned_cols=94  Identities=16%  Similarity=0.144  Sum_probs=64.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcch-
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK-  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K-  229 (332)
                      .+.+.||+.++++.++++|   ++++|+|.+. . .+...++.+|+..  ..+++.+     .  .+         ..| 
T Consensus        93 ~~~~~~~~~~~l~~l~~~g---~~~~i~Tn~~-~-~~~~~l~~~gl~~~f~~~~~~~-----~--~~---------~~Kp  151 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNG---YKLALVSNAS-P-RVKTLLEKFDLKKYFDALALSY-----E--IK---------AVKP  151 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTT---CEEEECCSCH-H-HHHHHHHHHTCGGGCSEEC--------------------------
T ss_pred             CceECcCHHHHHHHHHHCC---CEEEEEeCCc-H-HHHHHHHhcCcHhHeeEEEecc-----c--cC---------CCCC
Confidence            4678999999999999988   9999999874 4 5788888888642  1222211     0  00         112 


Q ss_pred             -HHHHHHHHHHhCCCCCceEEEEeCCcc-chHHhhhcCeeEEEc
Q 020024          230 -VQAFNNTLEKYGTDRKNLSVYIGDSVG-DLLCLLEADIGIVIG  271 (332)
Q Consensus       230 -~~~l~~~~~~~~~~~~~~viyiGDs~~-Dl~~l~~Ad~gvv~~  271 (332)
                       ...++..+.+.+..   . ++||||.+ |+.+++.||+.++.-
T Consensus       152 ~~~~~~~~~~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i~v  191 (220)
T 2zg6_A          152 NPKIFGFALAKVGYP---A-VHVGDIYELDYIGAKRSYVDPILL  191 (220)
T ss_dssp             -CCHHHHHHHHHCSS---E-EEEESSCCCCCCCSSSCSEEEEEB
T ss_pred             CHHHHHHHHHHcCCC---e-EEEcCCchHhHHHHHHCCCeEEEE
Confidence             23455566666652   3 99999999 999999999865543

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.84  E-value=2.6e-08  Score=90.88  Aligned_cols=56  Identities=20%  Similarity=0.321  Sum_probs=47.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.++...+.+ ..+++++|||.||++|++.|++||++++. +.+++.|
T Consensus       198 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  254 (290)
T 3dnp_A          198 PKGVSKEAGLALVASELGLS-MDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKA  254 (290)
T ss_dssp             ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHS
T ss_pred             ECCCCHHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhc
Confidence            44567999999999998874 47899999999999999999999999865 4555554

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.82  E-value=2.7e-08  Score=97.14  Aligned_cols=108  Identities=11%  Similarity=0.063  Sum_probs=70.3

Q ss_pred             HHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEcccc-----CHHHHHHHHHhcCCCcceEEeeeeEEcCceeccccccc
Q 020024          148 KKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW-----CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEK  222 (332)
Q Consensus       148 ~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~-----s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~  222 (332)
                      .+......+.||+.++|+.|+++|   ++++|+|.++     ....+...+..+.--...|++.+     .  .|     
T Consensus        93 ~~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~-----~--~~-----  157 (555)
T 3i28_A           93 DKAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC-----Q--VG-----  157 (555)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH-----H--HT-----
T ss_pred             HHhHhhcCcChhHHHHHHHHHHCC---CEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecc-----c--cC-----
Confidence            334556899999999999999999   9999999871     13344443322110112333321     0  01     


Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                        .+--+...+...+.+.+.+ ..++++||||.+|+.++..||+..+.-.+
T Consensus       158 --~~KP~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~  205 (555)
T 3i28_A          158 --MVKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQD  205 (555)
T ss_dssp             --CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred             --CCCCCHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence              0111345667777777774 57999999999999999999996555444

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.82  E-value=5.2e-08  Score=87.24  Aligned_cols=100  Identities=10%  Similarity=0.138  Sum_probs=67.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++++.++++|   +.+.+.|.+   ......|+.+|+...  .|++.     +..-.++         -+.
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g---~~i~i~~~~---~~~~~~L~~~gl~~~Fd~i~~~-----~~~~~~K---------P~p  173 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNN---IKIGLSSAS---KNAINVLNHLGISDKFDFIADA-----GKCKNNK---------PHP  173 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTT---CEEEECCSC---TTHHHHHHHHTCGGGCSEECCG-----GGCCSCT---------TSS
T ss_pred             ccccchhHHHHHHHHHhcc---ccccccccc---chhhhHhhhcccccccceeecc-----cccCCCC---------CcH
Confidence            4578999999999999998   888876653   345567888787421  22221     1110011         122


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ..+...+.+.+.. ..+++|||||.+|+.++..||+ .|.+++.
T Consensus       174 ~~~~~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~  216 (250)
T 4gib_A          174 EIFLMSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVGNY  216 (250)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESCT
T ss_pred             HHHHHHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEECCh
Confidence            4555566666763 5799999999999999999998 4556544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.81  E-value=1.6e-08  Score=91.73  Aligned_cols=76  Identities=17%  Similarity=0.343  Sum_probs=47.8

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhHhcCCeeeecCchhhhhhhhhh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGVTFIPLYPGLVKKQKEYT  302 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~~~~~~~~p~~~~~~~~~~~~~  302 (332)
                      ..+.+|...++.+++..+.+ ..++++||||.||++|++.|++||++++. +.+++.|.  -+.--+-..|+..-++.|.
T Consensus       193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~--~v~~~~~e~Gv~~~i~~~~  269 (279)
T 3mpo_A          193 NRRASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQ--AVTLTNAENGVAAAIRKYA  269 (279)
T ss_dssp             ESSCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCS--CBC------CHHHHHC---
T ss_pred             cCCCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcc--eeccCCCccHHHHHHHHHh
Confidence            34567999999999988874 47899999999999999999999998754 55665553  1211122335655554443

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=98.81  E-value=1.9e-07  Score=84.63  Aligned_cols=96  Identities=13%  Similarity=0.115  Sum_probs=69.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc---CCCc--ceEEeeeeEEcCceecccccccCCCCc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA---GLNA--LNVHANEFSFKESISTGEIIEKVESPI  227 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~---g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~  227 (332)
                      ...++||+.++++.++++|   ++++|+|.+- ....+..++..   |+..  ..|++           +.      .+ 
T Consensus       128 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~~~~l~~~fd~i~~-----------~~------~~-  185 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAG---MKVYIYSSGS-VEAQKLLFGHSTEGDILELVDGHFD-----------TK------IG-  185 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSEEEC-----------GG------GC-
T ss_pred             ccccCcCHHHHHHHHHhCC---CeEEEEeCCC-HHHHHHHHHhhcccChHhhccEEEe-----------cC------CC-
Confidence            4789999999999999999   9999999884 77778877754   3421  11221           10      11 


Q ss_pred             ch--HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          228 DK--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       228 ~K--~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .|  ...++..+.+.+.. ..++++||||.+|+.++..||+. |.+.
T Consensus       186 ~KP~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~  231 (261)
T 1yns_A          186 HKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVV  231 (261)
T ss_dssp             CTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEe
Confidence            23  35666677777763 47999999999999999999984 4454

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.80  E-value=4.3e-08  Score=89.64  Aligned_cols=56  Identities=14%  Similarity=0.268  Sum_probs=46.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.+++..+.+ .+++++||||.||++|++.|++||++++. +.+++.|
T Consensus       207 ~~~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A  263 (283)
T 3dao_A          207 AKGVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAA  263 (283)
T ss_dssp             ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHS
T ss_pred             eCCCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhc
Confidence            34567999999999998874 47899999999999999999999999865 4555544

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.79  E-value=3.2e-08  Score=84.47  Aligned_cols=89  Identities=19%  Similarity=0.211  Sum_probs=72.6

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      +++.|+++|   ++++|+|++. ...++.+++.+|++   +++.                   ...|...+++++...+.
T Consensus        47 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgi~---~~~~-------------------~~~k~~~l~~~~~~~~~  100 (176)
T 3mmz_A           47 GIAALRKSG---LTMLILSTEQ-NPVVAARARKLKIP---VLHG-------------------IDRKDLALKQWCEEQGI  100 (176)
T ss_dssp             HHHHHHHTT---CEEEEEESSC-CHHHHHHHHHHTCC---EEES-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEECcC-hHHHHHHHHHcCCe---eEeC-------------------CCChHHHHHHHHHHcCC
Confidence            889999999   9999999985 78999999998874   3331                   14589999999988876


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHH
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR  278 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~  278 (332)
                      . ..+++|||||.||++|+..|++++++++. +.+.+
T Consensus       101 ~-~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~  136 (176)
T 3mmz_A          101 A-PERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRG  136 (176)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHH
T ss_pred             C-HHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHH
Confidence            4 47899999999999999999999999654 33333

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.76  E-value=3.5e-08  Score=88.93  Aligned_cols=56  Identities=20%  Similarity=0.413  Sum_probs=46.2

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.+++..+.+ .++++++|||.||++|++.|++||++++. +.+++.|
T Consensus       196 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  252 (274)
T 3fzq_A          196 QKDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIA  252 (274)
T ss_dssp             ETTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHC
T ss_pred             eCCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhh
Confidence            34567999999999998874 47899999999999999999999999865 4444443

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.75  E-value=4.1e-08  Score=88.19  Aligned_cols=57  Identities=25%  Similarity=0.396  Sum_probs=46.9

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ...+..|...++.+++.++.+ .++++++|||.||++|++.|++||++++. +.+++.|
T Consensus       178 ~~~~~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A  235 (258)
T 2pq0_A          178 LPAGGSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVA  235 (258)
T ss_dssp             EESSCCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTC
T ss_pred             EECCCChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhC
Confidence            345678999999999988874 47899999999999999999999999743 4555443

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.72  E-value=1.5e-07  Score=83.86  Aligned_cols=99  Identities=10%  Similarity=0.147  Sum_probs=67.4

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..+.||+.++++.++++|   +++.|+|.+.   .....++.+|+...  .|++.     +..-.++.         ...
T Consensus        94 ~~~~pg~~~ll~~L~~~g---~~i~i~t~~~---~~~~~l~~~gl~~~fd~i~~~-----~~~~~~KP---------~p~  153 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQ---ISVGLASVSL---NAPTILAALELREFFTFCADA-----SQLKNSKP---------DPE  153 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTT---CEEEECCCCT---THHHHHHHTTCGGGCSEECCG-----GGCSSCTT---------STH
T ss_pred             ccccccHHHHHHhhhccc---ccceeccccc---chhhhhhhhhhcccccccccc-----ccccCCCC---------cHH
Confidence            468999999999999999   9999999753   35667777776321  12111     11111111         124


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      .+...+.+.+.. ..++++||||.+|+.+++.||+ .|.+..+
T Consensus       154 ~~~~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          154 IFLAACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             HHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             HHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            555566666764 5799999999999999999998 4555533

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.72  E-value=2.9e-08  Score=86.56  Aligned_cols=91  Identities=14%  Similarity=0.258  Sum_probs=72.7

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      .++.++++|   +++.|+|++. ...++.+++.+|+.  +++.+                   ...|...++.++...+.
T Consensus        60 ~l~~L~~~G---~~~~ivT~~~-~~~~~~~l~~lgi~--~~~~~-------------------~k~k~~~~~~~~~~~~~  114 (195)
T 3n07_A           60 GVKALMNAG---IEIAIITGRR-SQIVENRMKALGIS--LIYQG-------------------QDDKVQAYYDICQKLAI  114 (195)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHTTCC--EEECS-------------------CSSHHHHHHHHHHHHCC
T ss_pred             HHHHHHHCC---CEEEEEECcC-HHHHHHHHHHcCCc--EEeeC-------------------CCCcHHHHHHHHHHhCC
Confidence            489999999   9999999985 78999999998873  22221                   13588999999988887


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHH
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV  279 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~  279 (332)
                      . ..+++|||||.||++|+..|++++++++. +.+++.
T Consensus       115 ~-~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~  151 (195)
T 3n07_A          115 A-PEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQR  151 (195)
T ss_dssp             C-GGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHH
T ss_pred             C-HHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHh
Confidence            4 57899999999999999999999999754 334333

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.69  E-value=1e-07  Score=87.95  Aligned_cols=56  Identities=14%  Similarity=0.218  Sum_probs=46.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.+++..+.+ .+++++||||.||++|++.|++||++++. +.+++.|
T Consensus       224 ~~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~A  280 (304)
T 3l7y_A          224 TKGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAA  280 (304)
T ss_dssp             ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHC
T ss_pred             cCCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhc
Confidence            34567999999999988874 47899999999999999999999999865 4555544

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.68  E-value=2.1e-07  Score=82.48  Aligned_cols=101  Identities=12%  Similarity=0.111  Sum_probs=67.4

Q ss_pred             hhHHHHHHHHH-Hc-CCCCCc-----------EEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCC
Q 020024          158 DGCTTFFQKVV-KN-ENLNAN-----------VHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE  224 (332)
Q Consensus       158 pg~~e~l~~l~-~~-g~~~~~-----------~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~  224 (332)
                      +.+.++++.++ +. |   ..           +.+++.+...+.++.+++.++ +...+++..       ....+   ..
T Consensus        84 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~ei---~~  149 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPN---ARTSYTMPDRRAGLVIMRETINVETVREIINELN-LNLVAVDSG-------FAIHV---KK  149 (231)
T ss_dssp             SHHHHHHHHHHHHCTT---CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT-CSCEEEECS-------SCEEE---EC
T ss_pred             HHHHHHHHHHHHhCCC---ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC-CcEEEEecC-------cEEEE---ec
Confidence            77788888887 54 4   33           255552324677777777654 222333211       01111   22


Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      .+..|...++.++...+.. ..++++||||.||++|++.|+++++++..
T Consensus       150 ~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~~~  197 (231)
T 1wr8_A          150 PWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQA  197 (231)
T ss_dssp             TTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             CCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEecCC
Confidence            3457999999999888764 47899999999999999999999888654

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.67  E-value=1e-07  Score=82.25  Aligned_cols=85  Identities=14%  Similarity=0.278  Sum_probs=70.7

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      +++.|+++|   ++++|+|++. ...++.+++.+|+.  +++..                   ...|...++.++...+.
T Consensus        54 ~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~lgl~--~~f~~-------------------~~~K~~~~~~~~~~~g~  108 (189)
T 3mn1_A           54 GIKMLIASG---VTTAIISGRK-TAIVERRAKSLGIE--HLFQG-------------------REDKLVVLDKLLAELQL  108 (189)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEECcC-hHHHHHHHHHcCCH--HHhcC-------------------cCChHHHHHHHHHHcCC
Confidence            889999999   9999999985 78999999988873  23321                   04588999999988876


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      + ..+++|||||.||++++..|+++++++..
T Consensus       109 ~-~~~~~~vGD~~nDi~~~~~ag~~~~~~~~  138 (189)
T 3mn1_A          109 G-YEQVAYLGDDLPDLPVIRRVGLGMAVANA  138 (189)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             C-hhHEEEECCCHHHHHHHHHCCCeEEeCCc
Confidence            4 47899999999999999999999998654

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.64  E-value=1.7e-07  Score=78.14  Aligned_cols=92  Identities=14%  Similarity=0.172  Sum_probs=71.6

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHH
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN  235 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~  235 (332)
                      +.|+..++++.++++|   ++++|+|++. ...++..++.+|+.  ..+.      .             +..|...++.
T Consensus        37 ~~~~~~~~l~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~~~------~-------------~kp~~~~~~~   91 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMG---ITLAVISGRD-SAPLITRLKELGVE--EIYT------G-------------SYKKLEIYEK   91 (162)
T ss_dssp             EEHHHHHHHHHHHTTT---CEEEEEESCC-CHHHHHHHHHTTCC--EEEE------C-------------C--CHHHHHH
T ss_pred             ecccHHHHHHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCH--hhcc------C-------------CCCCHHHHHH
Confidence            4466689999999988   9999999985 78899999988863  2221      1             2347777888


Q ss_pred             HHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          236 TLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       236 ~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++...+.. ..+++|||||.+|+.++..|++++++...
T Consensus        92 ~~~~~~~~-~~~~~~vGD~~~Di~~a~~ag~~~~~~~~  128 (162)
T 2p9j_A           92 IKEKYSLK-DEEIGFIGDDVVDIEVMKKVGFPVAVRNA  128 (162)
T ss_dssp             HHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             HHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEecCc
Confidence            88777763 47899999999999999999998887533

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.62  E-value=1.9e-07  Score=79.64  Aligned_cols=91  Identities=16%  Similarity=0.222  Sum_probs=72.6

Q ss_pred             ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHH
Q 020024          157 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT  236 (332)
Q Consensus       157 rpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~  236 (332)
                      .+...++|+.++++|   ++++|+|++. ...+...++.+|+.  ..+.      +             ...|...++++
T Consensus        37 ~~~~~~~l~~L~~~G---~~~~i~Tg~~-~~~~~~~~~~lgl~--~~~~------~-------------~k~k~~~~~~~   91 (180)
T 1k1e_A           37 HVRDGLGIKMLMDAD---IQVAVLSGRD-SPILRRRIADLGIK--LFFL------G-------------KLEKETACFDL   91 (180)
T ss_dssp             EHHHHHHHHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTCC--EEEE------S-------------CSCHHHHHHHH
T ss_pred             ccchHHHHHHHHHCC---CeEEEEeCCC-cHHHHHHHHHcCCc--eeec------C-------------CCCcHHHHHHH
Confidence            344457999999999   9999999985 78889999888873  2221      1             13588888888


Q ss_pred             HHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          237 LEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       237 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +...+.. ..++++||||.||++++..|++++++...
T Consensus        92 ~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~  127 (180)
T 1k1e_A           92 MKQAGVT-AEQTAYIGDDSVDLPAFAACGTSFAVADA  127 (180)
T ss_dssp             HHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             HHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEeCCc
Confidence            8887764 47899999999999999999999988644

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.61  E-value=3.7e-07  Score=81.03  Aligned_cols=113  Identities=18%  Similarity=0.078  Sum_probs=80.4

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEE-c-Cc-ee-c---------------
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-K-ES-IS-T---------------  216 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~-~-~g-~~-t---------------  216 (332)
                      +.|...+.|+.++++|   +.++|+|+. +...+..+++.++++..-|-+|-..+ + +| .. .               
T Consensus        23 i~~~~~~~l~~l~~~g---~~~~i~TGr-~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~   98 (227)
T 1l6r_A           23 ISTKAIESIRSAEKKG---LTVSLLSGN-VIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK   98 (227)
T ss_dssp             BCHHHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHCC---CEEEEECCC-CcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence            4567788899999999   999999987 47778888888776432333343322 1 22 11 0               


Q ss_pred             ------------------------------------------c-cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeC
Q 020024          217 ------------------------------------------G-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD  253 (332)
Q Consensus       217 ------------------------------------------G-~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGD  253 (332)
                                                                + .+..-...+.+|...++.++...+.+ ..+++++||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~iGD  177 (227)
T 1l6r_A           99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGD  177 (227)
T ss_dssp             TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECC
T ss_pred             HhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcC-HHHEEEECC
Confidence                                                      0 00001134578999999999887763 468999999


Q ss_pred             CccchHHhhhcCeeEEEcCC
Q 020024          254 SVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       254 s~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      |.||++|++.|+++|+++..
T Consensus       178 ~~nD~~m~~~ag~~va~~n~  197 (227)
T 1l6r_A          178 SNNDMPMFQLPVRKACPANA  197 (227)
T ss_dssp             SGGGHHHHTSSSEEEECTTS
T ss_pred             cHHhHHHHHHcCceEEecCc
Confidence            99999999999999999754

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.60  E-value=3.1e-07  Score=78.65  Aligned_cols=97  Identities=9%  Similarity=0.032  Sum_probs=73.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++|+.++++|   ++++|+|++.....++..++.+|+...  +....               ..+..|...
T Consensus        66 ~~~~~~g~~e~L~~L~~~G---~~v~ivT~~~~~~~~~~~l~~~gl~~~--f~~~~---------------~~~~~k~~~  125 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLG---VPGAAASRTSEIEGANQLLELFDLFRY--FVHRE---------------IYPGSKITH  125 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHT---CCEEEEECCSCHHHHHHHHHHTTCTTT--EEEEE---------------ESSSCHHHH
T ss_pred             ccCcchhHHHHHHHHHHCC---ceEEEEeCCCChHHHHHHHHHcCcHhh--cceeE---------------EEeCchHHH
Confidence            5689999999999999999   999999987325788999988887421  11100               011247777


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ++.+++..+.. ..+++||||+.+|+.++..|++.++.
T Consensus       126 ~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~i~  162 (187)
T 2wm8_A          126 FERLQQKTGIP-FSQMIFFDDERRNIVDVSKLGVTCIH  162 (187)
T ss_dssp             HHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred             HHHHHHHcCCC-hHHEEEEeCCccChHHHHHcCCEEEE
Confidence            88788877764 47899999999999999999985443

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.59  E-value=1.9e-07  Score=82.44  Aligned_cols=85  Identities=14%  Similarity=0.314  Sum_probs=71.0

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      +++.|+++|   +++.|+|++. ...++.+++.+|+.  +++.+.                   ..|...++.+++..+.
T Consensus        84 ~L~~L~~~G---~~l~I~T~~~-~~~~~~~l~~lgi~--~~f~~~-------------------k~K~~~l~~~~~~lg~  138 (211)
T 3ij5_A           84 GIRCLITSD---IDVAIITGRR-AKLLEDRANTLGIT--HLYQGQ-------------------SDKLVAYHELLATLQC  138 (211)
T ss_dssp             HHHHHHHTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEECSC-------------------SSHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCc--hhhccc-------------------CChHHHHHHHHHHcCc
Confidence            889999999   9999999985 78999999998873  233210                   3588999999988886


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      + ..+++|||||.||++|+..|++++++++.
T Consensus       139 ~-~~~~~~vGDs~nDi~~~~~ag~~~a~~~~  168 (211)
T 3ij5_A          139 Q-PEQVAYIGDDLIDWPVMAQVGLSVAVADA  168 (211)
T ss_dssp             C-GGGEEEEECSGGGHHHHTTSSEEEECTTS
T ss_pred             C-cceEEEEcCCHHHHHHHHHCCCEEEeCCc
Confidence            4 57999999999999999999999998754

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.54  E-value=3.7e-07  Score=83.76  Aligned_cols=92  Identities=21%  Similarity=0.292  Sum_probs=72.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...++||+.++|+.|+++|   +++.|+|++. ...++.+++.+|+.  .++..            +     .+..|...
T Consensus       161 ~~~~~~g~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~--~~f~~------------i-----~~~~K~~~  217 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE------------V-----LPHQKSEE  217 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS------------C-----CTTCHHHH
T ss_pred             ccccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhCCc--eeeee------------c-----ChHHHHHH
Confidence            4589999999999999999   9999999985 88899999888863  22221            1     12368777


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ++++..     . .++++||||.||++++..||++|+++..
T Consensus       218 ~~~l~~-----~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~  252 (287)
T 3a1c_A          218 VKKLQA-----K-EVVAFVGDGINDAPALAQADLGIAVGSG  252 (287)
T ss_dssp             HHHHTT-----T-CCEEEEECTTTCHHHHHHSSEEEEECCC
T ss_pred             HHHHhc-----C-CeEEEEECCHHHHHHHHHCCeeEEeCCC
Confidence            765542     2 5899999999999999999999888643

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=98.54  E-value=1.3e-06  Score=78.96  Aligned_cols=95  Identities=16%  Similarity=0.208  Sum_probs=65.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc--C---------CCc--ceEEeeeeEEcCceecccc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA--G---------LNA--LNVHANEFSFKESISTGEI  219 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~--g---------~~~--~~I~aN~l~~~~g~~tG~~  219 (332)
                      ...++||+.++|+.    |   ++++|+|.+. ...++..++..  |         +..  ..++..       ..+|  
T Consensus       123 ~~~~~pgv~e~L~~----g---~~l~i~Tn~~-~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-------~~~g--  185 (253)
T 2g80_A          123 KAPVYADAIDFIKR----K---KRVFIYSSGS-VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-------NTSG--  185 (253)
T ss_dssp             CBCCCHHHHHHHHH----C---SCEEEECSSC-HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-------HHHC--
T ss_pred             cCCCCCCHHHHHHc----C---CEEEEEeCCC-HHHHHHHHHhhcccccccccccchHhhcceEEee-------eccC--
Confidence            46889999999988    7   9999999884 88888888765  3         210  111110       1111  


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                       ++     -........+++.+.. ..++++||||.+|+.++..||+. |.+.
T Consensus       186 -~K-----P~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~  231 (253)
T 2g80_A          186 -KK-----TETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLAS  231 (253)
T ss_dssp             -CT-----TCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred             -CC-----CCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence             01     1235556666667764 47899999999999999999984 4444

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.53  E-value=3.2e-07  Score=80.50  Aligned_cols=109  Identities=13%  Similarity=0.105  Sum_probs=75.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH---------------HHHHHHHHhcCCCcceEEeeeeEEcCceecc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSSAGLNALNVHANEFSFKESISTG  217 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~---------------~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG  217 (332)
                      ...+.||+.++|+.|+++|   ++++|+|.+. .               ..+...++.+|+....++..... .+|.+. 
T Consensus        54 ~~~~~~g~~e~L~~L~~~G---~~~~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-~~g~~~-  127 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAG---IPVVVVTNQS-GIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYH-EAGVGP-  127 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHT---CCEEEEEECH-HHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCC-TTCCST-
T ss_pred             cCeECcCHHHHHHHHHHCC---CEEEEEcCcC-CCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEeecC-CCCcee-
Confidence            4678999999999999999   9999999874 5               68888888888642233322111 112111 


Q ss_pred             cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          218 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       218 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ........+.-|...++.++.+.+.+ ..++++|||+.+|+.++..|++..
T Consensus       128 ~~~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~  177 (218)
T 2o2x_A          128 LAIPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ  177 (218)
T ss_dssp             TCCSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred             ecccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence            11111222223456777777777764 478999999999999999999854

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.52  E-value=3.3e-07  Score=95.02  Aligned_cols=93  Identities=22%  Similarity=0.277  Sum_probs=77.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -+++|+.++.++.|+++|   ++++++|+-- ......+.+.+|++  +++++                 ..+.+|.+.+
T Consensus       553 D~i~~~~~~aI~~L~~~G---i~v~mlTGd~-~~~a~~ia~~lgi~--~v~a~-----------------~~P~~K~~~v  609 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSG---IEIVMLTGDS-KRTAEAVAGTLGIK--KVVAE-----------------IMPEDKSRIV  609 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHT---CEEEEECSSC-HHHHHHHHHHHTCC--CEECS-----------------CCHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCC--EEEEe-----------------cCHHHHHHHH
Confidence            379999999999999999   9999999874 78888888888873  33331                 2345799999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      +++...     +..+.++|||.||.+||..||+||+++...
T Consensus       610 ~~l~~~-----g~~V~~vGDG~ND~paL~~AdvGIAmg~g~  645 (736)
T 3rfu_A          610 SELKDK-----GLIVAMAGDGVNDAPALAKADIGIAMGTGT  645 (736)
T ss_dssp             HHHHHH-----SCCEEEEECSSTTHHHHHHSSEEEEESSSC
T ss_pred             HHHHhc-----CCEEEEEECChHhHHHHHhCCEEEEeCCcc
Confidence            988764     257999999999999999999999998664

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.52  E-value=4.6e-07  Score=79.30  Aligned_cols=113  Identities=12%  Similarity=0.165  Sum_probs=76.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      ...+.||+.++|+.|+++|   ++++|+|.+..              ...+...++.+|+....++...-. .++ ..|.
T Consensus        48 ~~~~~pg~~e~L~~L~~~G---~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~~~~~~~~~-~~~-~~~~  122 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHH-PQG-SVEE  122 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCB-TTC-SSGG
T ss_pred             cCcCCcCHHHHHHHHHHCC---CeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceEEEEECCcC-CCC-cccc
Confidence            4678999999999999999   99999998741              368888888888752333322110 111 1111


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee--EEEc
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG--IVIG  271 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g--vv~~  271 (332)
                      ....+..+.-|...++.++...+.+ ..+++||||+.+|+.+++.|++.  |.+.
T Consensus       123 ~~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~  176 (211)
T 2gmw_A          123 FRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVR  176 (211)
T ss_dssp             GBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEES
T ss_pred             cCccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEe
Confidence            1111222223456777777777763 47899999999999999999984  4454

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.52  E-value=2.2e-08  Score=86.31  Aligned_cols=82  Identities=11%  Similarity=-0.005  Sum_probs=58.4

Q ss_pred             cCCCChhHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ...+.||+.++++.++++ |   ++++|+|++. ...++..++.+|+           |+ .++++             .
T Consensus        71 ~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~gl-----------f~-~i~~~-------------~  121 (193)
T 2i7d_A           71 DLEPIPGALDAVREMNDLPD---TQVFICTSPL-LKYHHCVGEKYRW-----------VE-QHLGP-------------Q  121 (193)
T ss_dssp             TCCBCTTHHHHHHHHHTSTT---EEEEEEECCC-SSCTTTHHHHHHH-----------HH-HHHCH-------------H
T ss_pred             cCccCcCHHHHHHHHHhCCC---CeEEEEeCCC-hhhHHHHHHHhCc-----------hh-hhcCH-------------H
Confidence            568999999999999998 8   9999999885 6777777777653           11 11111             0


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccc----hHHhh-hcCeeE
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADIGI  268 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~gv  268 (332)
                          .+.+.+. ...+++|||||.+|    +.++. .|++..
T Consensus       122 ----~~~~~~~-~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~  158 (193)
T 2i7d_A          122 ----FVERIIL-TRDKTVVLGDLLIDDKDTVRGQEETPSWEH  158 (193)
T ss_dssp             ----HHTTEEE-CSCGGGBCCSEEEESSSCCCSSCSSCSSEE
T ss_pred             ----HHHHcCC-CcccEEEECCchhhCcHHHhhcccccccce
Confidence                2233333 24689999999999    87777 777643

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.52  E-value=4.6e-07  Score=82.43  Aligned_cols=121  Identities=16%  Similarity=0.186  Sum_probs=79.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ..++.||+.++++.++++|   ++++|||+.-+   .......|+.+|++...  .+.+.+.++            ...|
T Consensus        99 ~~~~~pg~~ell~~L~~~G---~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~~Lilr~~------------~~~K  161 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANG---GTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--DKTLLLKKD------------KSNK  161 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--TTTEEEESS------------CSSS
T ss_pred             CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccccHHHHHHHHHHcCcCccc--cceeEecCC------------CCCh
Confidence            4688999999999999999   99999998742   36888889888975310  001111111            2358


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCeeeecCchhhh
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVK  296 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~~~~~  296 (332)
                      ..+++++... +   +..++||||+.+|+.+.-...  -.-.....+...+...|-.++-|-.-.|+
T Consensus       162 ~~~r~~L~~~-g---y~iv~~iGD~~~Dl~~~~~~~--~~~~r~a~v~~~~~~fG~~~ivlPNp~YG  222 (260)
T 3pct_A          162 SVRFKQVEDM-G---YDIVLFVGDNLNDFGDATYKK--SNAERRDFVAKNSKAFGKKFIVLPNTQYG  222 (260)
T ss_dssp             HHHHHHHHTT-T---CEEEEEEESSGGGGCGGGTTC--CHHHHHHHHHHTGGGBTTTEEECCCCSCS
T ss_pred             HHHHHHHHhc-C---CCEEEEECCChHHcCcccccC--CHHHHHHHHHHHHHHhCCCEEEeCCCCcc
Confidence            7777777642 2   356889999999999743221  01112234566677788777766554443

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.52  E-value=5.9e-07  Score=81.80  Aligned_cols=118  Identities=17%  Similarity=0.171  Sum_probs=78.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHHhcCCCc-c--eEEeeeeEEcCceecccccccCCCC
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNA-L--NVHANEFSFKESISTGEIIEKVESP  226 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~-~--~I~aN~l~~~~g~~tG~~~~~~~~~  226 (332)
                      ..++.||+.++++.++++|   ++++|||+.-+   .......|+.+|++. .  +++-     .++            .
T Consensus        99 ~~~~~pG~~ell~~L~~~G---~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil-----r~~------------~  158 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHN---GKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYL-----KKD------------K  158 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTT---EEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEE-----ESS------------C
T ss_pred             CCCCCccHHHHHHHHHHCC---CeEEEEeCCCccchHHHHHHHHHHcCcCcccccceec-----cCC------------C
Confidence            4678999999999999999   99999998642   368888898889853 1  2222     111            1


Q ss_pred             cchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHhHhcCCeeeecCchhhh
Q 020024          227 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVK  296 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~~~~~  296 (332)
                      ..|..+++.+... +   +..+.||||..+|+.+.-... . .-.....+...+...|-.++-|-.-.|+
T Consensus       159 ~~K~~~r~~l~~~-G---y~iv~~vGD~~~Dl~~~~~~~-~-~~~r~a~v~~~~~~fG~~~ivlPNp~YG  222 (262)
T 3ocu_A          159 SAKAARFAEIEKQ-G---YEIVLYVGDNLDDFGNTVYGK-L-NADRRAFVDQNQGKFGKTFIMLPNANYG  222 (262)
T ss_dssp             SCCHHHHHHHHHT-T---EEEEEEEESSGGGGCSTTTTC-C-HHHHHHHHHHTGGGBTTTEEECCCSSCS
T ss_pred             CChHHHHHHHHhc-C---CCEEEEECCChHHhccccccC-C-HHHHHHHHHHHHHHhCCCEEEeCCCCcc
Confidence            3587777776653 2   356889999999998744321 0 1112234566677788777766554443

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.51  E-value=2.7e-07  Score=78.59  Aligned_cols=89  Identities=17%  Similarity=0.201  Sum_probs=68.0

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHH--hcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHh
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFS--SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY  240 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~--~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~  240 (332)
                      .|+.|+++|   +++.|+|+.   ..++.+++  .+|+.   ++           .|        +.+|...++.++...
T Consensus        44 ~L~~Lk~~G---i~~~I~Tg~---~~~~~~l~~l~lgi~---~~-----------~g--------~~~K~~~l~~~~~~~   95 (168)
T 3ewi_A           44 GISLLKKSG---IEVRLISER---ACSKQTLSALKLDCK---TE-----------VS--------VSDKLATVDEWRKEM   95 (168)
T ss_dssp             HHHHHHHTT---CEEEEECSS---CCCHHHHHTTCCCCC---EE-----------CS--------CSCHHHHHHHHHHHT
T ss_pred             HHHHHHHCC---CEEEEEeCc---HHHHHHHHHhCCCcE---EE-----------EC--------CCChHHHHHHHHHHc
Confidence            578899999   999999985   67888888  44431   21           11        135999999999988


Q ss_pred             CCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          241 GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       241 ~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      +.. ..+++|||||.||++|+..|++++++++. +.+++.|
T Consensus        96 gi~-~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~A  135 (168)
T 3ewi_A           96 GLC-WKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAV  135 (168)
T ss_dssp             TCC-GGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTC
T ss_pred             CcC-hHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhC
Confidence            774 57999999999999999999999998654 3433333

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.50  E-value=5.7e-07  Score=75.02  Aligned_cols=85  Identities=19%  Similarity=0.191  Sum_probs=69.4

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      +++.++++|   ++++|+|++. ...++..++.+|+.  .++..                   ...|...++.++...+.
T Consensus        39 ~l~~l~~~g---~~~~i~T~~~-~~~~~~~~~~~gl~--~~~~~-------------------~kpk~~~~~~~~~~~~~   93 (164)
T 3e8m_A           39 GIFWAHNKG---IPVGILTGEK-TEIVRRRAEKLKVD--YLFQG-------------------VVDKLSAAEELCNELGI   93 (164)
T ss_dssp             HHHHHHHTT---CCEEEECSSC-CHHHHHHHHHTTCS--EEECS-------------------CSCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CEEEEEeCCC-hHHHHHHHHHcCCC--Eeecc-------------------cCChHHHHHHHHHHcCC
Confidence            788999999   9999999884 78999999988863  22221                   13488888888888876


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      + ..+++|||||.+|++++..|++++++.+.
T Consensus        94 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~  123 (164)
T 3e8m_A           94 N-LEQVAYIGDDLNDAKLLKRVGIAGVPASA  123 (164)
T ss_dssp             C-GGGEEEECCSGGGHHHHTTSSEEECCTTS
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCeEEcCCh
Confidence            3 47899999999999999999999888654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.46  E-value=3.1e-07  Score=79.40  Aligned_cols=85  Identities=15%  Similarity=0.350  Sum_probs=68.6

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      .++.|+++|   ++++|+|++. ...++..++.+|+.  .++...                   ..|...++.++...+.
T Consensus        54 ~l~~L~~~g---~~~~ivTn~~-~~~~~~~l~~lgl~--~~~~~~-------------------kpk~~~~~~~~~~~~~  108 (191)
T 3n1u_A           54 GLKLLMAAG---IQVAIITTAQ-NAVVDHRMEQLGIT--HYYKGQ-------------------VDKRSAYQHLKKTLGL  108 (191)
T ss_dssp             HHHHHHHTT---CEEEEECSCC-SHHHHHHHHHHTCC--EEECSC-------------------SSCHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEeCcC-hHHHHHHHHHcCCc--cceeCC-------------------CChHHHHHHHHHHhCC
Confidence            588999999   9999999884 78899999988873  222210                   2477888888887776


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      . ..++++||||.||++++..|+++++++..
T Consensus       109 ~-~~~~~~vGD~~~Di~~~~~ag~~~~~~~~  138 (191)
T 3n1u_A          109 N-DDEFAYIGDDLPDLPLIQQVGLGVAVSNA  138 (191)
T ss_dssp             C-GGGEEEEECSGGGHHHHHHSSEEEECTTC
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCEEEeCCc
Confidence            4 47899999999999999999999988755

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.45  E-value=5.8e-07  Score=92.01  Aligned_cols=91  Identities=22%  Similarity=0.279  Sum_probs=75.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||+..+.++.++++|   +++.++|+.- ....+.+.+.+|++  +++++                 ..+.+|...+
T Consensus       456 D~l~~~~~~~i~~L~~~G---i~v~~~TGd~-~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v  512 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV  512 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred             CCchhHHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCC--EEEEe-----------------CCHHhHHHHH
Confidence            369999999999999999   9999999874 78888888888873  33331                 1234799999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +++...      ..++++|||.||.+|++.||+||+++..
T Consensus       513 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g  546 (645)
T 3j08_A          513 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG  546 (645)
T ss_dssp             HHHTTT------CCEEEEECSSSCHHHHHHSSEEEEECCC
T ss_pred             HHHhhC------CeEEEEeCCHhHHHHHHhCCEEEEeCCC
Confidence            987642      5799999999999999999999999854

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.40  E-value=5.5e-07  Score=96.48  Aligned_cols=106  Identities=19%  Similarity=0.152  Sum_probs=78.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccccc-------------
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-------------  220 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~-------------  220 (332)
                      -++||++.+.++.|+++|   +++.++|+.. ......+.+..|+....   .  .+.+..++|.-.             
T Consensus       602 D~lr~~~~~~I~~l~~~G---i~v~miTGD~-~~ta~~ia~~lgi~~~~---~--~i~~~~~~g~~~~~l~~~~~~~~~~  672 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCRDAG---IRVIMITGDN-KGTAIAICRRIGIFGEN---E--EVADRAYTGREFDDLPLAEQREACR  672 (995)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHHTSSCTT---C--CCTTTEEEHHHHHTSCHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHcC---CEEEEECCCC-HHHHHHHHHHcCcCCCC---C--cccceEEEchhhhhCCHHHHHHHHh
Confidence            489999999999999999   9999999884 78888888888873210   0  001122233100             


Q ss_pred             ----ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          221 ----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       221 ----~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                          -.-+++.+|.+.++.+...     +..+.++|||.||.+||+.||+||+++.+
T Consensus       673 ~~~v~~r~~P~~K~~~v~~l~~~-----g~~v~~~GDG~ND~~alk~Advgiamg~g  724 (995)
T 3ar4_A          673 RACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSG  724 (995)
T ss_dssp             HCCEEESCCSSHHHHHHHHHHTT-----TCCEEEEECSGGGHHHHHHSTEEEEETTS
T ss_pred             hCcEEEEeCHHHHHHHHHHHHHC-----CCEEEEEcCCchhHHHHHHCCeEEEeCCC
Confidence                0113466899999988753     25799999999999999999999999844

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.39  E-value=8.4e-07  Score=91.94  Aligned_cols=91  Identities=22%  Similarity=0.279  Sum_probs=75.1

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      -++||+..+.++.+++.|   +++.++|+-- ......+.+.+|++  +++++                 ..+.+|...+
T Consensus       534 D~~~~~~~~~i~~l~~~G---i~v~~~TGd~-~~~a~~ia~~lgi~--~~~~~-----------------~~P~~K~~~v  590 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMG---IKVGMITGDN-WRSAEAISRELNLD--LVIAE-----------------VLPHQKSEEV  590 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCS--EEECS-----------------CCTTCHHHHH
T ss_pred             CCcchhHHHHHHHHHHCC---CEEEEECCCC-HHHHHHHHHHcCCc--EEEcc-----------------CCHHHHHHHH
Confidence            379999999999999999   9999999874 78888888888873  33332                 1234799999


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +++...      ..++++|||.||.+||+.||+||+++..
T Consensus       591 ~~l~~~------~~v~~vGDg~ND~~al~~A~vgiamg~g  624 (723)
T 3j09_A          591 KKLQAK------EVVAFVGDGINDAPALAQADLGIAVGSG  624 (723)
T ss_dssp             HHHTTT------CCEEEEECSSTTHHHHHHSSEEEECCCC
T ss_pred             HHHhcC------CeEEEEECChhhHHHHhhCCEEEEeCCC
Confidence            987642      5799999999999999999999999854

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.39  E-value=7.1e-08  Score=83.36  Aligned_cols=85  Identities=9%  Similarity=0.035  Sum_probs=58.4

Q ss_pred             cCCCChhHHHHHHHHHHc-CCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKN-ENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~-g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      .+.+.||+.++++.|+++ |   ++++|+|++. ...++..++.+|+...                .|.           
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~----------------~f~-----------  121 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQN---TDVFICTSPI-KMFKYCPYEKYAWVEK----------------YFG-----------  121 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTT---EEEEEEECCC-SCCSSHHHHHHHHHHH----------------HHC-----------
T ss_pred             cCCcCcCHHHHHHHHHhcCC---CeEEEEeCCc-cchHHHHHHHhchHHH----------------hch-----------
Confidence            578999999999999998 8   9999999985 5666666666553110                010           


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccc----hHHhh-hcCee-EEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGD----LLCLL-EADIG-IVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~D----l~~l~-~Ad~g-vv~~  271 (332)
                        ...+.+.+.. ..++++||||..|    +.+.. .|++. |.+.
T Consensus       122 --~~~~~~l~~~-~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~  164 (197)
T 1q92_A          122 --PDFLEQIVLT-RDKTVVSADLLIDDRPDITGAEPTPSWEHVLFT  164 (197)
T ss_dssp             --GGGGGGEEEC-SCSTTSCCSEEEESCSCCCCSCSSCSSEEEEEC
T ss_pred             --HHHHHHhccC-CccEEEECcccccCCchhhhcccCCCceEEEec
Confidence              0111222221 3578999999999    98888 88874 4444

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.39  E-value=1.1e-06  Score=75.46  Aligned_cols=85  Identities=15%  Similarity=0.300  Sum_probs=68.5

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCC
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT  242 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~  242 (332)
                      +++.++++|   ++++|+|++. ...++..++.+|++  .++.+                   +..|...++++++..+.
T Consensus        61 ~l~~L~~~g---~~v~ivT~~~-~~~~~~~l~~lgl~--~~~~~-------------------~kpk~~~~~~~~~~~g~  115 (188)
T 2r8e_A           61 GIRCALTSD---IEVAIITGRK-AKLVEDRCATLGIT--HLYQG-------------------QSNKLIAFSDLLEKLAI  115 (188)
T ss_dssp             HHHHHHTTT---CEEEEECSSC-CHHHHHHHHHHTCC--EEECS-------------------CSCSHHHHHHHHHHHTC
T ss_pred             HHHHHHHCC---CeEEEEeCCC-hHHHHHHHHHcCCc--eeecC-------------------CCCCHHHHHHHHHHcCC
Confidence            788899888   9999999885 78888899888863  22211                   23478888888888776


Q ss_pred             CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          243 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       243 ~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      . ..+++|||||.+|++++..|++++++...
T Consensus       116 ~-~~~~~~iGD~~~Di~~a~~ag~~~~~~~~  145 (188)
T 2r8e_A          116 A-PENVAYVGDDLIDWPVMEKVGLSVAVADA  145 (188)
T ss_dssp             C-GGGEEEEESSGGGHHHHTTSSEEEECTTS
T ss_pred             C-HHHEEEECCCHHHHHHHHHCCCEEEecCc
Confidence            3 47899999999999999999999888643

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=98.35  E-value=8e-07  Score=94.14  Aligned_cols=111  Identities=19%  Similarity=0.157  Sum_probs=78.5

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcC-ceecc-ccc--------ccCC
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTG-EII--------EKVE  224 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~-g~~tG-~~~--------~~~~  224 (332)
                      ++||++++.++.|++.|   +++.++|+-- ......+.++.|+....+-++.+...+ +..++ .+.        -.-.
T Consensus       535 p~R~ea~~aI~~l~~aG---I~v~MiTGD~-~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv  610 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLG---LSIKMLTGDA-VGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEV  610 (920)
T ss_dssp             CCCHHHHHHHHHHHHHT---CEEEEEESSC-HHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC
T ss_pred             cccccHHHHHHHHhhcC---ceEEEEcCCC-HHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEe
Confidence            79999999999999999   9999999874 777788888888742100111111111 01111 000        0124


Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      ++.+|.+.++.+.+.     +..+.++|||.||.+||+.||+||+++.+.
T Consensus       611 ~P~~K~~iV~~Lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~gt  655 (920)
T 1mhs_A          611 FPQHKYNVVEILQQR-----GYLVAMTGDGVNDAPSLKKADTGIAVEGSS  655 (920)
T ss_dssp             CSTHHHHHHHHHHTT-----TCCCEECCCCGGGHHHHHHSSEEEEETTSC
T ss_pred             CHHHHHHHHHHHHhC-----CCeEEEEcCCcccHHHHHhCCcCccccccc
Confidence            567999999988753     257899999999999999999999999653

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.35  E-value=8.3e-07  Score=75.57  Aligned_cols=107  Identities=18%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccc---------------cCHHHHHHHHHhcCCCcceEEeeeeEEcCceecc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC---------------WCGDLIRASFSSAGLNALNVHANEFSFKESISTG  217 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g---------------~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG  217 (332)
                      .+.+.||+.++|+.|+++|   ++++|+|.+               . ...+...++.+|+....|+...-...+..  +
T Consensus        40 ~~~~~pg~~e~L~~L~~~G---~~l~i~Tn~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gl~fd~v~~s~~~~~~~~--~  113 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGP-HNLMMQIFTSQGVQFDEVLICPHLPADEC--D  113 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTBTTBCHHHHHHH-HHHHHHHHHHTTCCEEEEEEECCCGGGCC--S
T ss_pred             HCcCCccHHHHHHHHHHCC---CEEEEEECCccccccccchHhhhhh-HHHHHHHHHHcCCCeeEEEEcCCCCcccc--c
Confidence            4788999999999999999   999999987               3 67888888888875222321100000000  0


Q ss_pred             cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCC
Q 020024          218 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSS  273 (332)
Q Consensus       218 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~  273 (332)
                             ..--+...++.++.+.+.. ..+++||||+.+|+.++..|++. |.+...
T Consensus       114 -------~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          114 -------CRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             -------SSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             -------ccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence                   0001223333334444442 47899999999999999999984 555544

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.34  E-value=1.5e-07  Score=82.36  Aligned_cols=45  Identities=18%  Similarity=0.258  Sum_probs=37.9

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCeeEEE
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVI  270 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gvv~  270 (332)
                      .+..|...++.+++..+.+ ..++++|||| .||+.|++.|+++++.
T Consensus       174 ~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~  219 (250)
T 2c4n_A          174 VGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETIL  219 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred             eCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEE
Confidence            3456788999999888874 5799999999 7999999999998664

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.33  E-value=1.8e-06  Score=78.53  Aligned_cols=88  Identities=9%  Similarity=0.134  Sum_probs=54.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...+.||+.++|+.|+++|   ++++|+|++..  ...+...|+.+|++.  +....+.+     .+.-.       .|.
T Consensus        99 ~~~~~pg~~e~L~~L~~~G---i~i~iaTnr~~~~~~~~~~~L~~~Gl~~--v~~~~vi~-----~~~~~-------~K~  161 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKG---VDIYYISNRKTNQLDATIKNLERVGAPQ--ATKEHILL-----QDPKE-------KGK  161 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTT---CEEEEEEEEEGGGHHHHHHHHHHHTCSS--CSTTTEEE-----ECTTC-------CSS
T ss_pred             CCCcCccHHHHHHHHHHCC---CEEEEEcCCchhHHHHHHHHHHHcCCCc--CCCceEEE-----CCCCC-------CCc
Confidence            4678899999999999999   99999998631  345666777778741  00011111     11100       121


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHh
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCL  261 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l  261 (332)
                      ........ .+   ...++|||||.+|+.+.
T Consensus       162 ~~~~~~~~-~~---~~~~l~VGDs~~Di~aA  188 (258)
T 2i33_A          162 EKRRELVS-QT---HDIVLFFGDNLSDFTGF  188 (258)
T ss_dssp             HHHHHHHH-HH---EEEEEEEESSGGGSTTC
T ss_pred             HHHHHHHH-hC---CCceEEeCCCHHHhccc
Confidence            22222222 11   24588999999999987

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.32  E-value=3.4e-06  Score=72.23  Aligned_cols=105  Identities=19%  Similarity=0.233  Sum_probs=73.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH---HHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---DLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPI  227 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~---~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~  227 (332)
                      .+.+.||+.++++.|+++|   ++++|+|.+. .   ..+...++.+|+...  .|++..     .     .......+-
T Consensus        32 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~~~~l~~~gl~~~fd~i~~~~-----~-----~~~~~~~~K   97 (189)
T 3ib6_A           32 EVVLRKNAKETLEKVKQLG---FKQAILSNTA-TSDTEVIKRVLTNFGIIDYFDFIYASN-----S-----ELQPGKMEK   97 (189)
T ss_dssp             TCCBCTTHHHHHHHHHHTT---CEEEEEECCS-SCCHHHHHHHHHHTTCGGGEEEEEECC-----T-----TSSTTCCCT
T ss_pred             CceeCcCHHHHHHHHHHCC---CEEEEEECCC-ccchHHHHHHHHhcCchhheEEEEEcc-----c-----cccccCCCC
Confidence            4789999999999999999   9999999874 4   788999998887421  222211     0     000000111


Q ss_pred             chHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCee-EEEcC
Q 020024          228 DKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       228 ~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      -+...++..+...+.. ..+++||||+ .+|+.++..+|+. |.+..
T Consensus        98 P~p~~~~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~  143 (189)
T 3ib6_A           98 PDKTIFDFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQN  143 (189)
T ss_dssp             TSHHHHHHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECC
T ss_pred             cCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence            1346667777777763 5789999999 7999999999995 44443

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.30  E-value=6.9e-07  Score=71.40  Aligned_cols=101  Identities=18%  Similarity=0.104  Sum_probs=69.0

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchHHHH
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQAF  233 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l  233 (332)
                      +.||+.++++.++++|   ++++|+|.+. ...++..++.+|+..  ..+++..          ..    .....+...+
T Consensus        19 ~~~~~~~~l~~L~~~G---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~----------~~----~~~Kp~~~~~   80 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNG---VGTVILSNDP-GGLGAAPIRELETNGVVDKVLLSG----------EL----GVEKPEEAAF   80 (137)
T ss_dssp             HHHHHHHHHHHHHHTT---CEEEEEECSC-CGGGGHHHHHHHHTTSSSEEEEHH----------HH----SCCTTSHHHH
T ss_pred             cCccHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHCChHhhccEEEEec----------cC----CCCCCCHHHH
Confidence            4678899999999999   9999999885 677777777765431  1233221          00    0011134556


Q ss_pred             HHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCChh
Q 020024          234 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSSSS  275 (332)
Q Consensus       234 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~~~  275 (332)
                      +..+...+.. ..++++|||+.+|+.+++.+++. +.+.....
T Consensus        81 ~~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~  122 (137)
T 2pr7_A           81 QAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR  122 (137)
T ss_dssp             HHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred             HHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence            6667766653 46899999999999999999984 44544433

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=98.22  E-value=5.7e-06  Score=88.93  Aligned_cols=110  Identities=17%  Similarity=0.164  Sum_probs=75.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEE---e-------eeeEEc---Cceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVH---A-------NEFSFK---ESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~---a-------N~l~~~---~g~~tG~  218 (332)
                      -++||++.+.|+.|+++|   +++.++|+-- ......+.+..|+...  ..+   +       ....-+   ....+|.
T Consensus       598 Dplr~~~~~aI~~l~~aG---I~v~miTGD~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~  673 (1028)
T 2zxe_A          598 DPPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS  673 (1028)
T ss_dssp             CCBCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred             CCCChhHHHHHHHHHHcC---CEEEEECCCC-HHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence            479999999999999999   9999999874 7777778888776310  000   0       000000   0011111


Q ss_pred             c-------------------cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          219 I-------------------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       219 ~-------------------~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      -                   .-.-.++.+|...++.+.+.     +..+.++|||.||.+||+.||+||+++.
T Consensus       674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-----g~~V~~iGDG~ND~paLk~AdvGIAmg~  741 (1028)
T 2zxe_A          674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMGI  741 (1028)
T ss_dssp             HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEESS
T ss_pred             HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-----CCEEEEEcCCcchHHHHHhCCceEEeCC
Confidence            0                   00113456899999887753     2578899999999999999999999983

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=98.20  E-value=1.2e-06  Score=92.56  Aligned_cols=104  Identities=19%  Similarity=0.202  Sum_probs=76.9

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccc----------c----
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI----------I----  220 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~----------~----  220 (332)
                      ++||++++.++.|++.|   +++.++|+-- ......+.++.|+.. .++      ++...+|.-          .    
T Consensus       488 p~R~~a~~aI~~l~~aG---I~v~MiTGD~-~~tA~~iA~~lGi~~-~~~------~~~~l~g~~~~~~~~~~~l~~~~~  556 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLG---VNVKMITGDQ-LAIGKETGRRLGMGT-NMY------PSSALLGTHKDANLASIPVEELIE  556 (885)
T ss_dssp             CCCHHHHHHHHHHHHTT---CCCEEEESSC-HHHHTHHHHTTTCTT-CCS------TTSSCCBGGGGTTSCCSCHHHHHH
T ss_pred             ccchhHHHHHHHHHHcC---CcEEEEcCCC-hHHHHHHHHHhCCcc-ccC------CcceeeccccccccchhHHHHHHh
Confidence            78999999999999999   9999999874 777778888888732 110      011111100          0    


Q ss_pred             ----ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          221 ----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       221 ----~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                          -.-..+.+|.+.++.+.+.     +..+.++|||.||.+||+.||+||+++...
T Consensus       557 ~~~v~arv~P~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdvGIAmg~gt  609 (885)
T 3b8c_A          557 KADGFAGVFPEHKYEIVKKLQER-----KHIVGMTGDGVNDAPALKKADIGIAVADAT  609 (885)
T ss_dssp             TSCCEECCCHHHHHHHHHHHHHT-----TCCCCBCCCSSTTHHHHHHSSSCCCCSSSH
T ss_pred             hCcEEEEECHHHHHHHHHHHHHC-----CCeEEEEcCCchhHHHHHhCCEeEEeCCcc
Confidence                0123457899999988763     257889999999999999999999998653

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.14  E-value=4.3e-06  Score=81.05  Aligned_cols=96  Identities=15%  Similarity=0.150  Sum_probs=65.7

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEcccc-------C-HHH---HHHHHHhcCCCcceEEeeeeEEcCceecccccccCC
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-GDL---IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE  224 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~-------s-~~~---I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~  224 (332)
                      +.||+.++|+.|+++|   ++++|+|.+-       + ..+   +..+|+.+|+....++|.+     ....+    +  
T Consensus        88 ~~pgv~e~L~~L~~~G---~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~-----~~~~~----K--  153 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEG---YKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATH-----AGLNR----K--  153 (416)
T ss_dssp             SCTTHHHHHHHHHHTT---CEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECS-----SSTTS----T--
T ss_pred             hcccHHHHHHHHHHCC---CeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECC-----CCCCC----C--
Confidence            7899999999999999   9999999831       0 233   7778888887533333321     11001    1  


Q ss_pred             CCcchHHHHHHHHHHhC----CCCCceEEEEeCCc-----------------cchHHhhhcCeeEE
Q 020024          225 SPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSV-----------------GDLLCLLEADIGIV  269 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~----~~~~~~viyiGDs~-----------------~Dl~~l~~Ad~gvv  269 (332)
                         -+...+...+...+    . ...+++||||+.                 +|+.++..|++.++
T Consensus       154 ---P~p~~~~~a~~~l~~~~~v-~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~  215 (416)
T 3zvl_A          154 ---PVSGMWDHLQEQANEGIPI-SVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  215 (416)
T ss_dssp             ---TSSHHHHHHHHHSSTTCCC-CGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred             ---CCHHHHHHHHHHhCCCCCC-CHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence               12255555666654    4 347899999997                 79999999997654

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.12  E-value=2.9e-06  Score=74.49  Aligned_cols=90  Identities=9%  Similarity=0.050  Sum_probs=52.3

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC--CCcceEEeee-e-EEcCceecccccccCCCCcchHH
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG--LNALNVHANE-F-SFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g--~~~~~I~aN~-l-~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ..||+.++++.++++|   ++++|+|.+. ...+...++.+.  ++  .++++. . .+..    ++..         ..
T Consensus        89 ~~~~~~e~l~~L~~~G---~~l~ivTn~~-~~~~~~~l~~l~~~f~--~i~~~~~~~~~~~----~KP~---------p~  149 (211)
T 2b82_A           89 PKEVARQLIDMHVRRG---DAIFFVTGRS-PTKTETVSKTLADNFH--IPATNMNPVIFAG----DKPG---------QN  149 (211)
T ss_dssp             ECHHHHHHHHHHHHHT---CEEEEEECSC-CCSSCCHHHHHHHHTT--CCTTTBCCCEECC----CCTT---------CC
T ss_pred             CcHHHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHHHhcC--ccccccchhhhcC----CCCC---------HH
Confidence            5789999999999999   9999999873 332222222210  11  111110 0 0100    0111         11


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      .+.+.+.+.+     -++|||||.+|+.++..||+..+
T Consensus       150 ~~~~~~~~~g-----~~l~VGDs~~Di~aA~~aG~~~i  182 (211)
T 2b82_A          150 TKSQWLQDKN-----IRIFYGDSDNDITAARDVGARGI  182 (211)
T ss_dssp             CSHHHHHHTT-----EEEEEESSHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHCC-----CEEEEECCHHHHHHHHHCCCeEE
Confidence            2233344433     29999999999999999998544

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.06  E-value=1e-05  Score=71.80  Aligned_cols=45  Identities=20%  Similarity=0.306  Sum_probs=38.1

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEEc
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVIG  271 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~~  271 (332)
                      +..|...++.++...+.. .+++++||||. ||+.|++.|+++++.-
T Consensus       189 ~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~a~~aG~~~~~v  234 (271)
T 2x4d_A          189 GKPSPEFFKSALQAIGVE-AHQAVMIGDDIVGDVGGAQRCGMRALQV  234 (271)
T ss_dssp             STTCHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred             cCCCHHHHHHHHHHhCCC-cceEEEECCCcHHHHHHHHHCCCcEEEE
Confidence            445788999888888874 57999999998 9999999999986654

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=98.03  E-value=1.5e-05  Score=85.61  Aligned_cols=109  Identities=18%  Similarity=0.163  Sum_probs=72.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceE------------EeeeeEEc---Cceeccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNV------------HANEFSFK---ESISTGE  218 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I------------~aN~l~~~---~g~~tG~  218 (332)
                      -++||+.++.++.|+++|   +++.++|+-- ...+..+.+..|+.....            ......-.   ....+|.
T Consensus       603 Dp~r~~~~~aI~~l~~aG---I~vvmiTGd~-~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~  678 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAG---IRVIMVTGDH-PITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM  678 (1034)
T ss_pred             CCCchhHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence            379999999999999999   9999999863 677777777777621100            00000000   0011111


Q ss_pred             c-------------------cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          219 I-------------------IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       219 ~-------------------~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      .                   .-.-.++.+|.+.++.+...     +..++++|||.||.+||+.||+||+|+
T Consensus       679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-----g~~V~a~GDG~ND~~mLk~A~vGIAMg  745 (1034)
T 3ixz_A          679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-----GAIVAVTGDGVNDSPALKKADIGVAMG  745 (1034)
T ss_pred             hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-----CCEEEEECCcHHhHHHHHHCCeeEEeC
Confidence            0                   00113456788888776542     257889999999999999999999997

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.94  E-value=9.9e-05  Score=62.21  Aligned_cols=28  Identities=4%  Similarity=0.137  Sum_probs=24.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYC  183 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g  183 (332)
                      ..+++.||+.++|+.|++ +   ++++|+|++
T Consensus        66 ~~~~~~pg~~e~L~~L~~-~---~~~~i~T~~   93 (180)
T 3bwv_A           66 RNLDVMPHAQEVVKQLNE-H---YDIYIATAA   93 (180)
T ss_dssp             GSCCBCTTHHHHHHHHTT-T---SEEEEEECC
T ss_pred             ccCCCCcCHHHHHHHHHh-c---CCEEEEeCC
Confidence            357899999999999986 5   899999986

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=97.91  E-value=3.8e-05  Score=66.44  Aligned_cols=100  Identities=15%  Similarity=-0.004  Sum_probs=65.5

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++|+.|+++|   +++.|+|++. ...+...+. ..+  ..|++.+     ....++         -+..
T Consensus        33 ~~~~~~pg~~e~L~~L~~~g---~~~~i~T~~~-~~~~~~~~~-~~~--d~v~~~~-----~~~~~K---------P~p~   91 (196)
T 2oda_A           33 EHAQLTPGAQNALKALRDQG---MPCAWIDELP-EALSTPLAA-PVN--DWMIAAP-----RPTAGW---------PQPD   91 (196)
T ss_dssp             GGGSBCTTHHHHHHHHHHHT---CCEEEECCSC-HHHHHHHHT-TTT--TTCEECC-----CCSSCT---------TSTH
T ss_pred             ccCCcCcCHHHHHHHHHHCC---CEEEEEcCCh-HHHHHHhcC-ccC--CEEEECC-----cCCCCC---------CChH
Confidence            34678999999999999999   9999999874 666644333 111  2233321     111111         1234


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      .+...+.+.+.....+++|||||.+|+.++..|++. |.+..
T Consensus        92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~  133 (196)
T 2oda_A           92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLAS  133 (196)
T ss_dssp             HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESS
T ss_pred             HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEcc
Confidence            555556666653336899999999999999999984 44543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.82  E-value=2.2e-05  Score=71.42  Aligned_cols=56  Identities=18%  Similarity=0.259  Sum_probs=47.2

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHhH
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS  281 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~~  281 (332)
                      .+..|...++.+++..+.+ .+++++||||.||++|++.|++||++++. +.+++.|.
T Consensus       206 ~~~~K~~al~~l~~~lgi~-~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~  262 (285)
T 3pgv_A          206 GGVSKGHALEAVAKMLGYT-LSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP  262 (285)
T ss_dssp             TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCT
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCC
Confidence            3567999999999988874 47899999999999999999999999855 56666653

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.82  E-value=2e-05  Score=70.58  Aligned_cols=56  Identities=20%  Similarity=0.289  Sum_probs=46.4

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.+++.++.+ .++++++|||.||++|++.|++||++++. +.+++.|
T Consensus       190 ~~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~A  246 (268)
T 3r4c_A          190 VAGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVA  246 (268)
T ss_dssp             ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTC
T ss_pred             eCCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhc
Confidence            34567999999999998874 47899999999999999999999999865 4555443

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=97.77  E-value=2.9e-05  Score=68.70  Aligned_cols=43  Identities=19%  Similarity=0.200  Sum_probs=34.8

Q ss_pred             chHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCee-EEEc
Q 020024          228 DKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG  271 (332)
Q Consensus       228 ~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-vv~~  271 (332)
                      .|...++.++++.+.. ..++++||||. ||+.|+..|++. |.+.
T Consensus       180 p~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~i~v~  224 (259)
T 2ho4_A          180 PEKTFFLEALRDADCA-PEEAVMIGDDCRDDVDGAQNIGMLGILVK  224 (259)
T ss_dssp             TSHHHHHHHGGGGTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred             CCHHHHHHHHHHcCCC-hHHEEEECCCcHHHHHHHHHCCCcEEEEC
Confidence            4667888888887764 57999999998 999999999984 4444

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.76  E-value=1.5e-05  Score=76.42  Aligned_cols=108  Identities=12%  Similarity=0.085  Sum_probs=68.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc----eEEeeeeEEcCceecccccccC-CCCc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL----NVHANEFSFKESISTGEIIEKV-ESPI  227 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~----~I~aN~l~~~~g~~tG~~~~~~-~~~~  227 (332)
                      .+.+.||+.++++.|+++|   ++++|+|.+. ...+...++.+|+...    .|++.+-...    .|.-.+.. ..+-
T Consensus       213 ~~~l~pGv~elL~~Lk~~G---i~laIvTn~~-~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~----~~~~~~~~kp~~K  284 (384)
T 1qyi_A          213 ILRPVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLE----AENMYPQARPLGK  284 (384)
T ss_dssp             BSSCHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHH----HHHHSTTSCCCCT
T ss_pred             CCCcCcCHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHcCChHhcCCCEEEecccccc----cccccccccCCCC
Confidence            4688999999999999999   9999999985 8899999998887421    3444321100    00000000 0000


Q ss_pred             chHHHHHHHHHHhC--------------CCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          228 DKVQAFNNTLEKYG--------------TDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       228 ~K~~~l~~~~~~~~--------------~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      -+.......+...+              . ...++++||||.+|+.++..||+.++
T Consensus       285 P~P~~~~~a~~~lg~~~~~~~~~~~~~~v-~p~e~l~VGDs~~Di~aAk~AG~~~I  339 (384)
T 1qyi_A          285 PNPFSYIAALYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFI  339 (384)
T ss_dssp             TSTHHHHHHHHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEE
T ss_pred             CCHHHHHHHHHHcCCccccccccccccCC-CCcCeEEEcCCHHHHHHHHHcCCEEE
Confidence            01122232333322              2 24789999999999999999998544

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=97.69  E-value=4.4e-05  Score=68.16  Aligned_cols=42  Identities=17%  Similarity=0.390  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCee-EEEcC
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIGS  272 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-vv~~~  272 (332)
                      ...++..+...+.+ ..++++|||+ .+|+.++..||+. |.+..
T Consensus       186 p~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~  229 (264)
T 1yv9_A          186 AIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTS  229 (264)
T ss_dssp             HHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETT
T ss_pred             HHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEECC
Confidence            35777777777764 4789999999 6999999999985 44543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.56  E-value=7e-05  Score=66.92  Aligned_cols=47  Identities=28%  Similarity=0.250  Sum_probs=41.4

Q ss_pred             CcchHHHHHHHHHHhCC-CCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          226 PIDKVQAFNNTLEKYGT-DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~-~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      +.+|...++.++...+. . .++++++|||.||++|++.|++||+++..
T Consensus       177 g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~va~gna  224 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcEEEeCCC
Confidence            67899999999987654 4 47899999999999999999999999865

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.49  E-value=0.00014  Score=66.17  Aligned_cols=55  Identities=18%  Similarity=0.351  Sum_probs=45.1

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV  279 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~  279 (332)
                      ..+.+|...++.++...+.. ..+++++|||.||++|++.|+++|+++.. +.+++.
T Consensus       194 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~  249 (282)
T 1rkq_A          194 DKRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEV  249 (282)
T ss_dssp             ETTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhh
Confidence            44568999999999888874 47899999999999999999999999654 445443

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.48  E-value=0.00015  Score=65.33  Aligned_cols=54  Identities=20%  Similarity=0.344  Sum_probs=44.8

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHH
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV  279 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~  279 (332)
                      .+..|...++.++...+.. ..+++++|||.||++|++.|++||+++.. +.+++.
T Consensus       188 ~~~~K~~~~~~l~~~l~i~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~  242 (271)
T 1rlm_A          188 PGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQI  242 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHh
Confidence            4567999999999988874 47899999999999999999999999654 445443

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.46  E-value=0.00017  Score=64.24  Aligned_cols=56  Identities=14%  Similarity=0.146  Sum_probs=45.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+.+|...++.++...+.. ..+++++|||.||++|++.|++||+++.. +.+++.+
T Consensus       158 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a  214 (244)
T 1s2o_A          158 PQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWY  214 (244)
T ss_dssp             ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHH
T ss_pred             cCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHH
Confidence            34567999999999888764 47899999999999999999999999644 5566653

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.37  E-value=0.00023  Score=64.77  Aligned_cols=54  Identities=20%  Similarity=0.303  Sum_probs=44.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR  278 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~  278 (332)
                      ..+.+|...++.++...+.. ..+++++|||.||++|++.|+++|+++.. +.+++
T Consensus       212 ~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~  266 (288)
T 1nrw_A          212 SRKASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS  266 (288)
T ss_dssp             ETTCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHH
T ss_pred             cCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHh
Confidence            44668999999999888774 47899999999999999999999999754 34444

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=97.37  E-value=0.00071  Score=61.77  Aligned_cols=98  Identities=9%  Similarity=-0.015  Sum_probs=60.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHh--------cCCCcceEEeeeeEEcCceecccccccC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSS--------AGLNALNVHANEFSFKESISTGEIIEKV  223 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~--------~g~~~~~I~aN~l~~~~g~~tG~~~~~~  223 (332)
                      ..+.||+.++|+.|+++|   ++++|+|+.-.  ...+...|+.        +|+....+++..    ++  .+    + 
T Consensus       187 ~~~~~g~~e~L~~L~~~g---~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~--~~----k-  252 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMG---YQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE----QG--DT----R-  252 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTT---CEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC----TT--CC----S-
T ss_pred             cCCChHHHHHHHHHHHCC---CeEEEEeCCCcccchhHHHHHHhcccccccccCCCchheeecc----CC--CC----c-
Confidence            467999999999999999   99999998631  1234556666        676322222211    11  01    1 


Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ....-|..+++++    +......++|||||.+|+.++..|++.++
T Consensus       253 p~p~~~~~~~~~~----~~~~~~~~~~vgD~~~di~~a~~aG~~~~  294 (301)
T 1ltq_A          253 KDDVVKEEIFWKH----IAPHFDVKLAIDDRTQVVEMWRRIGVECW  294 (301)
T ss_dssp             CHHHHHHHHHHHH----TTTTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHHHH----hccccceEEEeCCcHHHHHHHHHcCCeEE
Confidence            1112233444433    22222346899999999999999998644

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.36  E-value=0.00023  Score=65.57  Aligned_cols=54  Identities=19%  Similarity=0.313  Sum_probs=44.7

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR  278 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~  278 (332)
                      ..+.+|...++.++...+.. ..++++||||.||++|++.|++||+++.. +.+++
T Consensus       220 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~  274 (301)
T 2b30_A          220 KLGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKS  274 (301)
T ss_dssp             ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHh
Confidence            34568999999999888764 47899999999999999999999999854 44444

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.35  E-value=0.00014  Score=65.13  Aligned_cols=48  Identities=23%  Similarity=0.363  Sum_probs=41.7

Q ss_pred             cchHHHHHHHHHHhCCCCC--ceEEEEeCCccchHHhhhcCeeEEEcCChh
Q 020024          227 IDKVQAFNNTLEKYGTDRK--NLSVYIGDSVGDLLCLLEADIGIVIGSSSS  275 (332)
Q Consensus       227 ~~K~~~l~~~~~~~~~~~~--~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~  275 (332)
                      .+|...++.+++.++.. .  .+++++|||.||++|++.|++||++++...
T Consensus       175 ~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~  224 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP  224 (259)
T ss_dssp             CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred             CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence            47999999999887762 3  689999999999999999999999987654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.29  E-value=0.00036  Score=62.30  Aligned_cols=50  Identities=20%  Similarity=0.383  Sum_probs=43.0

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ...+..|...++.++...+.. ..++++||||.||++|++.|++++++++.
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~~n~  231 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQA  231 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             cCCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEecCc
Confidence            345678999999999888874 47899999999999999999999999754

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.26  E-value=0.00028  Score=63.56  Aligned_cols=55  Identities=22%  Similarity=0.317  Sum_probs=44.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV  279 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~  279 (332)
                      ..+.+|...++.++...+.. ..+++++|||.||++|++.|++|++++.. +.+++.
T Consensus       186 ~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~  241 (268)
T 1nf2_A          186 PKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEA  241 (268)
T ss_dssp             CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHH
T ss_pred             CCCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhh
Confidence            34567999999999888774 47899999999999999999999999754 444443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.25  E-value=0.00021  Score=63.41  Aligned_cols=44  Identities=16%  Similarity=0.229  Sum_probs=38.3

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhc--CeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~gvv~~~~  273 (332)
                      ..+.+|...++.+++.+     . ++++|||.||++|++.|  ++||+|++.
T Consensus       156 ~~~~~Kg~al~~l~~~~-----g-via~GD~~ND~~Ml~~a~~g~~vam~Na  201 (239)
T 1u02_A          156 VPGVNKGSAIRSVRGER-----P-AIIAGDDATDEAAFEANDDALTIKVGEG  201 (239)
T ss_dssp             CTTCCHHHHHHHHHTTS-----C-EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred             cCCCCHHHHHHHHHhhC-----C-eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence            34568999999988753     2 99999999999999999  999999976

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.23  E-value=0.00017  Score=65.34  Aligned_cols=49  Identities=20%  Similarity=0.235  Sum_probs=40.8

Q ss_pred             CCCcchHHHHHHHHHHhC-CCCCce--EEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYG-TDRKNL--SVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~-~~~~~~--viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ..+.+|...++.++...+ .. ..+  ++++|||.||++|++.|++||+++..
T Consensus       185 ~~~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~  236 (275)
T 1xvi_A          185 DASAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYAVIVKGL  236 (275)
T ss_dssp             ETTCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEEEECCCC
T ss_pred             cCCCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCceEEecCC
Confidence            345679999999887766 43 246  99999999999999999999999765

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=96.55  E-value=0.00078  Score=58.36  Aligned_cols=95  Identities=11%  Similarity=0.107  Sum_probs=62.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .+.+|||+.+|++++.+.    ++++|+|++. ..+++.+++.++...  .+... .+.+.+..+           |..+
T Consensus        66 ~v~~RPgv~efL~~l~~~----~~i~I~Tss~-~~~a~~vl~~ld~~~--~f~~~-l~rd~~~~~-----------k~~~  126 (195)
T 2hhl_A           66 YVLKRPHVDEFLQRMGQL----FECVLFTASL-AKYADPVADLLDRWG--VFRAR-LFRESCVFH-----------RGNY  126 (195)
T ss_dssp             EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCCSS--CEEEE-ECGGGCEEE-----------TTEE
T ss_pred             EEEeCcCHHHHHHHHHcC----CeEEEEcCCC-HHHHHHHHHHhCCcc--cEEEE-EEcccceec-----------CCce
Confidence            367899999999999975    8999999995 999999999887642  22211 111111111           1000


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeE
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI  268 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gv  268 (332)
                      ++. +...+. ...++|+|+||..++.+...+++.|
T Consensus       127 lK~-L~~Lg~-~~~~~vivDDs~~~~~~~~~ngi~i  160 (195)
T 2hhl_A          127 VKD-LSRLGR-ELSKVIIVDNSPASYIFHPENAVPV  160 (195)
T ss_dssp             ECC-GGGSSS-CGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred             eee-HhHhCC-ChhHEEEEECCHHHhhhCccCccEE
Confidence            110 111222 2478999999999999888887543

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.49  E-value=0.0011  Score=58.73  Aligned_cols=53  Identities=13%  Similarity=0.149  Sum_probs=39.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeC----CccchHHhhhcCe-eEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-gvv~~~~-~~L~~~~  280 (332)
                      ..+.+|...++.+   .+.. .++++++||    |.||++|++.|+. |+.+++. +.+++.|
T Consensus       184 ~~~~~Kg~al~~l---~~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A  242 (246)
T 2amy_A          184 PDGWDKRYCLRHV---ENDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICE  242 (246)
T ss_dssp             ETTCSGGGGGGGT---TTSC-CSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHH
T ss_pred             cCCCchHHHHHHH---hCCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHH
Confidence            3455788888877   4553 479999999    9999999999988 8988865 4555554

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=96.45  E-value=0.0038  Score=53.22  Aligned_cols=92  Identities=11%  Similarity=0.114  Sum_probs=61.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCcee--cccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIS--TGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~--tG~~~~~~~~~~~K~  230 (332)
                      .+.+|||+.+|++++.+.    ++++|+|++. ..+++.+++.++...  .+... .+.+...  .|.+.        |.
T Consensus        53 ~v~~rPg~~efL~~l~~~----~~i~I~T~~~-~~~a~~vl~~ld~~~--~f~~~-~~rd~~~~~k~~~~--------k~  116 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGEL----FECVLFTASL-AKYADPVADLLDKWG--AFRAR-LFRESCVFHRGNYV--------KD  116 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH----SEEEEECSSC-HHHHHHHHHHHCTTC--CEEEE-ECGGGSEEETTEEE--------CC
T ss_pred             EEEeCCCHHHHHHHHHhC----CCEEEEcCCC-HHHHHHHHHHHCCCC--cEEEE-EeccCceecCCcEe--------cc
Confidence            367899999999999984    8999999995 999999999887632  22221 1111110  01111        10


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                            +...+. ...++|+||||..++.+...+++.
T Consensus       117 ------L~~Lg~-~~~~~vivdDs~~~~~~~~~ngi~  146 (181)
T 2ght_A          117 ------LSRLGR-DLRRVLILDNSPASYVFHPDNAVP  146 (181)
T ss_dssp             ------GGGTCS-CGGGEEEECSCGGGGTTCTTSBCC
T ss_pred             ------HHHhCC-CcceEEEEeCCHHHhccCcCCEeE
Confidence                  111222 247899999999999887777654

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=96.42  E-value=0.0032  Score=56.41  Aligned_cols=53  Identities=13%  Similarity=0.179  Sum_probs=40.4

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeC----CccchHHhhhcCe-eEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-gvv~~~~-~~L~~~~  280 (332)
                      ..+.+|...|+.+   .+.+ .++++++||    |.||++|++.|+. |+.+++. +.+++.|
T Consensus       193 ~~~vsKg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a  251 (262)
T 2fue_A          193 PEGWDKRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCR  251 (262)
T ss_dssp             ETTCSTTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHH
T ss_pred             cCCCCHHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhh
Confidence            3456799999988   5553 479999999    9999999999884 8888644 3444444

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=95.92  E-value=0.087  Score=47.36  Aligned_cols=34  Identities=12%  Similarity=0.119  Sum_probs=25.3

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.++.++++|   +.++++|+. +...+...++.++++
T Consensus        28 ~al~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~   61 (288)
T 1nrw_A           28 NALRQAQRDG---IEVVVSTGR-AHFDVMSIFEPLGIK   61 (288)
T ss_dssp             HHHHHHHHTT---CEEEEECSS-CHHHHHHHHGGGTCC
T ss_pred             HHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCC
Confidence            3456677778   999999986 467777888777764

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=95.90  E-value=0.0029  Score=56.43  Aligned_cols=53  Identities=15%  Similarity=0.055  Sum_probs=41.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCC----ccchHHhhhcC-eeEEEcCChhHHHHhH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS----VGDLLCLLEAD-IGIVIGSSSSLRRVGS  281 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs----~~Dl~~l~~Ad-~gvv~~~~~~L~~~~~  281 (332)
                      ..+.+|...|+.+++     ..++++++||+    .||++|++.|+ .|+.+++.....+.|+
T Consensus       183 ~~gv~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~  240 (246)
T 3f9r_A          183 PVGWDKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVE  240 (246)
T ss_dssp             ETTCSGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHH
Confidence            445678888887776     24799999995    99999999886 6888887765555554

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=95.13  E-value=0.035  Score=45.45  Aligned_cols=40  Identities=10%  Similarity=-0.076  Sum_probs=27.7

Q ss_pred             hhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCCCc
Q 020024          158 DGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNA  200 (332)
Q Consensus       158 pg~~e~l~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~g~~~  200 (332)
                      |++.+.|+.++++|   +.++|+|+--  ...-+..+++.+|++.
T Consensus        27 ~~~~~al~~l~~~G---~~iii~TgR~~~~~~~~~~~l~~~gi~~   68 (142)
T 2obb_A           27 PFAVETLKLLQQEK---HRLILWSVREGELLDEAIEWCRARGLEF   68 (142)
T ss_dssp             TTHHHHHHHHHHTT---CEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHCC---CEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence            45667888899889   9999999741  0234555667777653

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=95.12  E-value=0.03  Score=50.94  Aligned_cols=98  Identities=11%  Similarity=0.014  Sum_probs=58.0

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccccc-----ccCCCCcc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-----EKVESPID  228 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~-----~~~~~~~~  228 (332)
                      ....|++.++++.+++.|   . ++|+|.+- ....        .....+..     .-|.+...+.     .....+..
T Consensus       155 ~~~~~~~~~~l~~l~~~g---~-~~i~tn~~-~~~~--------~~~~~~~~-----~~g~l~~~~~~~~~~~~~~~~KP  216 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPE---C-LLVATDRD-PWHP--------LSDGSRTP-----GTGSLAAAVETASGRQALVVGKP  216 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTT---S-EEEESCCC-CEEE--------CTTSCEEE-----CHHHHHHHHHHHHTCCCEECSTT
T ss_pred             CCCHHHHHHHHHHHHcCC---C-EEEEEcCC-cccc--------CCCCCcCC-----CCcHHHHHHHHHhCCCceeeCCC
Confidence            456788899999988777   6 88888652 2110        00000000     0010000000     01112233


Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCeeEEE
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIVI  270 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~gvv~  270 (332)
                      |...++.+++..+.. ..++++|||+. ||+.|+..|++..++
T Consensus       217 ~~~~~~~~~~~lgi~-~~e~l~vGD~~~~Di~~a~~aG~~~i~  258 (306)
T 2oyc_A          217 SPYMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVL  258 (306)
T ss_dssp             STHHHHHHHHHSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEE
T ss_pred             CHHHHHHHHHHcCCC-hHHEEEECCCchHHHHHHHHCCCeEEE
Confidence            556888888888764 57999999996 999999999996544

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=94.67  E-value=0.022  Score=50.43  Aligned_cols=45  Identities=20%  Similarity=0.165  Sum_probs=37.0

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCeeEEEc
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG  271 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gvv~~  271 (332)
                      +..|...++.+++..+.+ .+++++|||+ .||+.|++.|++++++-
T Consensus       194 ~kpk~~~~~~~~~~lgi~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v  239 (271)
T 1vjr_A          194 GKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILV  239 (271)
T ss_dssp             STTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCHHHHHHHHHHhCCC-CceEEEECCCcHHHHHHHHHcCCeEEEE
Confidence            344778888888888874 5799999999 59999999999976654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=94.56  E-value=0.028  Score=49.76  Aligned_cols=45  Identities=16%  Similarity=0.312  Sum_probs=36.7

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCeeEEEc
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIG  271 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gvv~~  271 (332)
                      +..|...++.++...+.+ ..++++|||+ .||+.|++.|++++++.
T Consensus       182 ~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v  227 (266)
T 3pdw_A          182 GKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLV  227 (266)
T ss_dssp             STTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred             CCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEE
Confidence            344568888888888874 5799999999 79999999999965544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=94.13  E-value=0.41  Score=42.39  Aligned_cols=33  Identities=9%  Similarity=-0.258  Sum_probs=24.5

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|+. +++|   ++++|+|+- +..-+...++.+|++
T Consensus        26 ~al~~-~~~G---i~v~iaTGR-~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A           26 RNIEK-LSRK---CYVVFASGR-MLVSTLNVEKKYFKR   58 (268)
T ss_dssp             HHHHH-HTTT---SEEEEECSS-CHHHHHHHHHHHSSS
T ss_pred             HHHHH-HhCC---CEEEEECCC-ChHHHHHHHHHhCCC
Confidence            45666 6677   999999987 366777788777764

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=94.08  E-value=0.36  Score=43.13  Aligned_cols=34  Identities=6%  Similarity=-0.095  Sum_probs=25.7

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|++++++|   +.++|+|+- +...+...++.++++
T Consensus        29 ~aL~~l~~~G---i~vviaTGR-~~~~~~~~~~~l~l~   62 (282)
T 1rkq_A           29 NAIAAARARG---VNVVLTTGR-PYAGVHNYLKELHME   62 (282)
T ss_dssp             HHHHHHHHTT---CEEEEECSS-CGGGTHHHHHHTTCC
T ss_pred             HHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHhCCC
Confidence            4566777888   999999986 366677788877764

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=94.05  E-value=0.16  Score=45.46  Aligned_cols=34  Identities=12%  Similarity=0.101  Sum_probs=26.6

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|+.++++|   +.++|+|+. +...+...++.++++
T Consensus        33 ~~l~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~   66 (275)
T 1xvi_A           33 PWLTRLREAN---VPVILCSSK-TSAEMLYLQKTLGLQ   66 (275)
T ss_dssp             HHHHHHHHTT---CCEEEECSS-CHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCC
Confidence            4566677788   999999987 477788888887764

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=93.70  E-value=0.12  Score=46.19  Aligned_cols=34  Identities=6%  Similarity=-0.105  Sum_probs=24.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      +.|+.++++|   +.++|.|+- +..-+..+++.+|++
T Consensus        45 ~al~~l~~~G---~~v~iaTGR-~~~~~~~~~~~l~~~   78 (285)
T 3pgv_A           45 ETLKLLTARG---INFVFATGR-HYIDVGQIRDNLGIR   78 (285)
T ss_dssp             HHHHHHHTTT---CEEEEECSS-CGGGGHHHHHHHCSC
T ss_pred             HHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHhcCCC
Confidence            4456667777   899898875 356677777777765

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=93.56  E-value=0.3  Score=44.41  Aligned_cols=32  Identities=9%  Similarity=0.034  Sum_probs=23.8

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHH--HhcC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASF--SSAG  197 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l--~~~g  197 (332)
                      +.|+.++++|   +.++|.|+- +...+..++  +.++
T Consensus        52 ~al~~l~~~G---i~v~iaTGR-~~~~~~~~~~~~~l~   85 (301)
T 2b30_A           52 DAIKEAIEKG---YMVSICTGR-SKVGILSAFGEENLK   85 (301)
T ss_dssp             HHHHHHHHHT---CEEEEECSS-CHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHCC---CEEEEEcCC-CHHHHHHHhhHHhhc
Confidence            4566677788   999999986 366777777  7665

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=92.95  E-value=0.42  Score=42.32  Aligned_cols=32  Identities=16%  Similarity=-0.001  Sum_probs=21.0

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG  197 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g  197 (332)
                      +.|+.++++|   ++++|.|+- +..-+...++.++
T Consensus        28 ~al~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~   59 (271)
T 1rlm_A           28 AQYQELKKRG---IKFVVASGN-QYYQLISFFPELK   59 (271)
T ss_dssp             HHHHHHHHHT---CEEEEECSS-CHHHHGGGCTTTT
T ss_pred             HHHHHHHHCC---CEEEEEeCC-cHHHHHHHHHhcC
Confidence            4456677778   999999986 3555555554444

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=92.83  E-value=0.19  Score=44.31  Aligned_cols=42  Identities=24%  Similarity=0.468  Sum_probs=33.2

Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCe-eEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-gvv~~  271 (332)
                      |...++.++...+.. ..++++|||+ .||+.|+..|++ .+.+.
T Consensus       184 ~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~  227 (264)
T 3epr_A          184 NAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVT  227 (264)
T ss_dssp             SHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred             CHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEEC
Confidence            445677777777764 5789999999 799999999998 44454

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=92.25  E-value=0.42  Score=42.06  Aligned_cols=42  Identities=12%  Similarity=0.130  Sum_probs=29.8

Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEcCC
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      +...++..+..  . ...++++|||+. +|+.++..+|+ .+.+..+
T Consensus       189 ~~~~~~~~~~~--~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g  232 (263)
T 1zjj_A          189 NEPMYEVVREM--F-PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTG  232 (263)
T ss_dssp             SHHHHHHHHHH--S-TTCEEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred             CHHHHHHHHHh--C-CcccEEEECCChHHHHHHHHHcCCeEEEECCC
Confidence            34555555544  2 347999999995 99999999998 4555533

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=91.84  E-value=0.17  Score=44.67  Aligned_cols=27  Identities=11%  Similarity=0.226  Sum_probs=19.3

Q ss_pred             eEEEcCC-hhHHHHhHhcCCeeeecCch
Q 020024          267 GIVIGSS-SSLRRVGSQFGVTFIPLYPG  293 (332)
Q Consensus       267 gvv~~~~-~~L~~~~~~~~~~~~p~~~~  293 (332)
                      -+++++. ..=...|+.-|++.+-...+
T Consensus       202 ~~~vGD~~~~Di~~a~~aG~~~~~v~~g  229 (264)
T 3epr_A          202 AVMVGDNYLTDIMAGINNDIDTLLVTTG  229 (264)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred             EEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence            4778877 45577888889887765543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=91.65  E-value=0.19  Score=44.25  Aligned_cols=46  Identities=13%  Similarity=0.089  Sum_probs=36.1

Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCee-EEEc
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .+..|...++.++...+.+ ..++++|||+ .+|+.|+..|++. +.+.
T Consensus       185 ~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v~  232 (268)
T 3qgm_A          185 VGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLVL  232 (268)
T ss_dssp             CSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred             cCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEEC
Confidence            3445668888888888874 5799999999 5999999999973 3443

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=90.49  E-value=0.38  Score=42.74  Aligned_cols=40  Identities=18%  Similarity=0.214  Sum_probs=30.3

Q ss_pred             HHHHHHHHHh----CCCCCceEEEEeCCc-cchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKY----GTDRKNLSVYIGDSV-GDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~----~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..++..+...    +.. ..++++|||+. +|+.++..|++. +.+.
T Consensus       208 ~~~~~a~~~l~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~  253 (284)
T 2hx1_A          208 QMFMFAYDMLRQKMEIS-KREILMVGDTLHTDILGGNKFGLDTALVL  253 (284)
T ss_dssp             HHHHHHHHHHHTTSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEEES
T ss_pred             HHHHHHHHHHhhccCCC-cceEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence            4556666666    653 47899999995 999999999984 4454

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=89.40  E-value=0.82  Score=40.21  Aligned_cols=28  Identities=4%  Similarity=-0.171  Sum_probs=19.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHH
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASF  193 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l  193 (332)
                      +.|++++++|   ++++|+|+.- ..-+...+
T Consensus        28 ~~l~~l~~~g---~~~~iaTGR~-~~~~~~~l   55 (246)
T 3f9r_A           28 ALIKRARGAG---FCVGTVGGSD-FAKQVEQL   55 (246)
T ss_dssp             HHHHHHHHTT---CEEEEECSSC-HHHHHHHH
T ss_pred             HHHHHHHHCC---CEEEEECCCC-HHHHHHHh
Confidence            4577788888   9999999863 44343333

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=84.62  E-value=0.34  Score=40.27  Aligned_cols=15  Identities=33%  Similarity=0.042  Sum_probs=12.9

Q ss_pred             ceEEEEeCCCCcccc
Q 020024           31 RLIIFSDFDLTCTIV   45 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~   45 (332)
                      ...++||+||||++.
T Consensus        12 ~k~vifD~DGTL~d~   26 (176)
T 3mmz_A           12 IDAVVLDFDGTQTDD   26 (176)
T ss_dssp             CSEEEECCTTTTSCS
T ss_pred             CCEEEEeCCCCcCcC
Confidence            358999999999983

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=84.31  E-value=0.66  Score=40.09  Aligned_cols=40  Identities=8%  Similarity=-0.011  Sum_probs=35.8

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL  198 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~  198 (332)
                      +.+|||+.+|++.+. ++   ++++|.|++. ..+++.+++.++.
T Consensus        58 v~~RPgl~eFL~~l~-~~---yeivI~Tas~-~~ya~~vl~~LDp   97 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QY---YEIVLFSSNY-MMYSDKIAEKLDP   97 (204)
T ss_dssp             EEECTTHHHHHHHHT-TT---EEEEEECSSC-HHHHHHHHHHTST
T ss_pred             EEeCCCHHHHHHHHH-hC---CEEEEEcCCc-HHHHHHHHHHhCC
Confidence            678999999999998 56   9999999995 9999999998764

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=83.41  E-value=0.52  Score=41.06  Aligned_cols=18  Identities=22%  Similarity=0.058  Sum_probs=14.9

Q ss_pred             CCceEEEEeCCCCccccc
Q 020024           29 GDRLIIFSDFDLTCTIVD   46 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~D   46 (332)
                      .++.++++|+||||...+
T Consensus         4 ~~~kli~~DlDGTLl~~~   21 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPR   21 (246)
T ss_dssp             CCSEEEEEESBTTTBCTT
T ss_pred             CCceEEEEECCCCcCCCC
Confidence            456799999999999754

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=83.09  E-value=0.47  Score=37.33  Aligned_cols=25  Identities=0%  Similarity=-0.142  Sum_probs=19.2

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccc
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYC  183 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g  183 (332)
                      +.+++.+.++.++++|   ++++|+|+.
T Consensus        25 ~~~~~~~~l~~l~~~G---i~~~iaTGR   49 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLG---FEIVISTAR   49 (126)
T ss_dssp             BCHHHHHHHHHHHHTT---CEEEEEECT
T ss_pred             CCHHHHHHHHHHHhCC---CeEEEEeCC
Confidence            3455667788888888   999999975

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=82.41  E-value=0.51  Score=39.60  Aligned_cols=16  Identities=19%  Similarity=-0.132  Sum_probs=13.4

Q ss_pred             ceEEEEeCCCCccccc
Q 020024           31 RLIIFSDFDLTCTIVD   46 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~D   46 (332)
                      ...++||+||||++..
T Consensus        19 ik~vifD~DGTL~d~~   34 (189)
T 3mn1_A           19 IKLAVFDVDGVLTDGR   34 (189)
T ss_dssp             CCEEEECSTTTTSCSE
T ss_pred             CCEEEEcCCCCcCCcc
Confidence            4589999999999753

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=82.23  E-value=0.53  Score=40.63  Aligned_cols=15  Identities=13%  Similarity=0.018  Sum_probs=13.0

Q ss_pred             ceEEEEeCCCCcccc
Q 020024           31 RLIIFSDFDLTCTIV   45 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~   45 (332)
                      ...+|||+||||++.
T Consensus        49 ik~viFDlDGTL~Ds   63 (211)
T 3ij5_A           49 IRLLICDVDGVMSDG   63 (211)
T ss_dssp             CSEEEECCTTTTSSS
T ss_pred             CCEEEEeCCCCEECC
Confidence            458999999999975

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=81.80  E-value=2.1  Score=42.48  Aligned_cols=40  Identities=3%  Similarity=-0.030  Sum_probs=33.3

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-CC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GL  198 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~  198 (332)
                      +.-.|....+|+.+++.|    ++.+||-+- .+++..++..+ |+
T Consensus       245 v~kdp~l~~~L~~Lr~~G----KlfLiTNS~-~~yv~~~m~yllg~  285 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG----KVFLATNSD-YKYTDKIMTYLFDF  285 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS----EEEEECSSC-HHHHHHHHHHHTCS
T ss_pred             cCCChHHHHHHHHHHHcC----CEEEEeCCC-hHHHHHHHHHhcCC
Confidence            566788999999999987    799999874 78999988776 53

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=81.70  E-value=0.61  Score=37.66  Aligned_cols=16  Identities=25%  Similarity=0.133  Sum_probs=13.5

Q ss_pred             ceEEEEeCCCCccccc
Q 020024           31 RLIIFSDFDLTCTIVD   46 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~D   46 (332)
                      ...++||+||||++.+
T Consensus         4 ik~vifD~DGTL~~~~   19 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGG   19 (164)
T ss_dssp             CCEEEECSTTTTSSSE
T ss_pred             ceEEEEcCCCceEcCc
Confidence            3589999999999854

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=81.30  E-value=0.55  Score=41.18  Aligned_cols=15  Identities=33%  Similarity=0.425  Sum_probs=12.8

Q ss_pred             eEEEEeCCCCccccc
Q 020024           32 LIIFSDFDLTCTIVD   46 (332)
Q Consensus        32 ~lvi~DFD~TiT~~D   46 (332)
                      ++++||+||||++.+
T Consensus         1 ~li~~DlDGTLl~~~   15 (259)
T 3zx4_A            1 MIVFTDLDGTLLDER   15 (259)
T ss_dssp             CEEEECCCCCCSCSS
T ss_pred             CEEEEeCCCCCcCCC
Confidence            379999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	332
d2bdua1	291	c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III	1e-10

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.8 bits (142), Expect = 1e-10
 Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 39/235 (16%)

Query: 30  DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQ 89
            +L I +DFD+T +                          +        + N   L++ +
Sbjct: 36  AKLQIITDFDMTLSRFSY--------------------NGKRCPTCHNIIDNCK-LVTDE 74

Query: 90  YTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK 149
              +  Q  E +   E       E      E+  +  +   ++     + +GI    +K+
Sbjct: 75  CRRKLLQLKEQYYAIEVDPVLTVE------EKFPYMVE-WYTKSHGLLIEQGIPKAKLKE 127

Query: 150 --AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVH--A 205
             A   + L++G   FF K+ ++      V + S    GD++      AG+   NV   +
Sbjct: 128 IVADSDVMLKEGYENFFGKLQQH---GIPVFIFSAGI-GDVLEEVIRQAGVYHSNVKVVS 183

Query: 206 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY--GTDRKNLSVYIGDSVGDL 258
           N   F E+        ++    +K        + +    D  N+ + +GDS GDL
Sbjct: 184 NFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNI-ILLGDSQGDL 237

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	332
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.97
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.94
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.92
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.82
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.64
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.19
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.17
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.17
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.16
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.16
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.15
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.06
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.06
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.06
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.04
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.03
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.01
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.0
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.93
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	98.9
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.89
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.88
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.87
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	98.86
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.84
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.81
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.79
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.76
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.74
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.71
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.7
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.69
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.36
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.35
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.15
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.14
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.11
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.03
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	97.92
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.89
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.89
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.83
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.81
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.79
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	97.69
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.39
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.22
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	97.1
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	96.99
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.6
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	95.63
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	93.48
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	93.19
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	92.82
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	91.92
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	90.03
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	89.61
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	89.3
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	89.13
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	88.53
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	88.28
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	88.18
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	84.39
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	83.25
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	82.38

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.5e-30  Score=239.96  Aligned_cols=230  Identities=17%  Similarity=0.247  Sum_probs=176.5

Q ss_pred             CCceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 020024           29 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE  108 (332)
Q Consensus        29 ~~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~  108 (332)
                      +++++||+|||+|||+.|+.+..+.                     ++|.+......+++.|++...+++++|+|.+.+.
T Consensus        35 ~~klqVisDFD~Tit~~~~~~~~~~---------------------s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d~   93 (291)
T d2bdua1          35 AAKLQIITDFDMTLSRFSYNGKRCP---------------------TCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDP   93 (291)
T ss_dssp             GGGEEEEECCTTTTBCSEETTEECC---------------------CHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred             hhhEEEEecCCCcccccccCCcccc---------------------hhHHHHhhCCCCCHHHHHHHHHHHhhhcccccCC
Confidence            6899999999999999987543111                     1122333334456777888888999999999888


Q ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH
Q 020024          109 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG  186 (332)
Q Consensus       109 ~~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~--~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~  186 (332)
                      .++.++.+++|.   |||.+++..+.+.    |++++++.+.+.  .+.||||+.+|++.|+++|   ++++|||+|| .
T Consensus        94 ~~s~~ek~~~m~---ew~~~~~~ll~~~----~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~---i~~~IvSgG~-~  162 (291)
T d2bdua1          94 VLTVEEKFPYMV---EWYTKSHGLLIEQ----GIPKAKLKEIVADSDVMLKEGYENFFGKLQQHG---IPVFIFSAGI-G  162 (291)
T ss_dssp             SSCHHHHHHHHH---HHHHHHHHHHHHH----CCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHT---CCEEEEEEEE-H
T ss_pred             CCCHHHHHHHHH---HHHHHHHHHHHHc----CCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcC---CeEEEEcCCh-H
Confidence            899999999864   8999999998775    799999999976  5899999999999999999   9999999999 9


Q ss_pred             HHHHHHHHhcCC--CcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHh-CCCCCceEEEEeCCccchHHhhh
Q 020024          187 DLIRASFSSAGL--NALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKY-GTDRKNLSVYIGDSVGDLLCLLE  263 (332)
Q Consensus       187 ~~I~~~l~~~g~--~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~-~~~~~~~viyiGDs~~Dl~~l~~  263 (332)
                      .+|+++++++|+  ++++|+||.+.|+++..++.+.+++....+|...+.+..... ....+.++|++|||.||+.|+..
T Consensus       163 ~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g  242 (291)
T d2bdua1         163 DVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG  242 (291)
T ss_dssp             HHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTT
T ss_pred             HHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhC
Confidence            999999999887  456899999999987777778777666667765544332211 11124689999999999999985


Q ss_pred             cC---e--eEEE-cCC--hhHHHHhHhcCCeeeec
Q 020024          264 AD---I--GIVI-GSS--SSLRRVGSQFGVTFIPL  290 (332)
Q Consensus       264 Ad---~--gvv~-~~~--~~L~~~~~~~~~~~~p~  290 (332)
                      +.   .  +|-+ +++  ..|.+|+..+.+.++--
T Consensus       243 ~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d  277 (291)
T d2bdua1         243 VANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKE  277 (291)
T ss_dssp             CSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETC
T ss_pred             CccccceeeeehhHhhHHHHHHHHHhcCCEEEecC
Confidence            42   2  2333 222  46788887777665543

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=204.62  Aligned_cols=201  Identities=16%  Similarity=0.126  Sum_probs=149.3

Q ss_pred             ceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCC
Q 020024           31 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF  110 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~~  110 (332)
                      ...|+|||||||++.|+.+.|++...                      ..++...+...++.                  
T Consensus        10 ~~aV~FD~DGTLi~~e~~~~l~~~~g----------------------~~~~~~~~~~~~~~------------------   49 (217)
T d1nnla_          10 ADAVCFDVDSTVIREEGIDELAKICG----------------------VEDAVSEMTRRAMG------------------   49 (217)
T ss_dssp             CSEEEEETBTTTBSSCHHHHHHHHTT----------------------CTTTC---------------------------
T ss_pred             CCEEEEcCccccCCccHHHHHHHHcC----------------------ChHHHHHHHHHHHc------------------
Confidence            44789999999999999888876531                      22233333332322                  


Q ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh-cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 020024          111 NYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI  189 (332)
Q Consensus       111 ~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~-~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I  189 (332)
                         ++++|.+.+.       .+   ..++++...+.++...+ .+.++||+.+++++|+++|   ++++|||+++ ..++
T Consensus        50 ---g~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~l~pg~~~~i~~lk~~G---~~~~ivS~~~-~~~v  112 (217)
T d1nnla_          50 ---GAVPFKAALT-------ER---LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERN---VQVFLISGGF-RSIV  112 (217)
T ss_dssp             ------CHHHHHH-------HH---HHHHCCCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHH
T ss_pred             ---CCCCHHHHHH-------HH---HHhcccchHHHHHHHHhhccccCHHHHHHHHHHHhCC---CEEEEECCCc-hHHH
Confidence               2222222221       11   25667766666666654 5789999999999999999   9999999998 8999


Q ss_pred             HHHHHhcCCCcceEEeeeeEEc-Cceeccccc-ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          190 RASFSSAGLNALNVHANEFSFK-ESISTGEII-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       190 ~~~l~~~g~~~~~I~aN~l~~~-~g~~tG~~~-~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      +++++.+|++..+++||++.++ +|.+||... .++..+.+|...++.+..+.+.   .+++|||||.||++|++.||++
T Consensus       113 ~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~~~---~~~~~vGDs~~Di~~~~~ag~~  189 (217)
T d1nnla_         113 EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADAF  189 (217)
T ss_dssp             HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSEE
T ss_pred             HHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHHhccCc---cccEEEEeCHhhHHHHHhCCce
Confidence            9999999998778999999986 588888554 3456778899999988776653   6899999999999999999999


Q ss_pred             EEEcCChhHHHHhHhcCCeeeecC
Q 020024          268 IVIGSSSSLRRVGSQFGVTFIPLY  291 (332)
Q Consensus       268 vv~~~~~~L~~~~~~~~~~~~p~~  291 (332)
                      |++++++.+..++++..|.+.-|.
T Consensus       190 va~~~~~~~~~~~~~ad~~i~~f~  213 (217)
T d1nnla_         190 IGFGGNVIRQQVKDNAKWYITDFV  213 (217)
T ss_dssp             EEECSSCCCHHHHHHCSEEESCGG
T ss_pred             EEECCCHHHHHHHHhCCCEeCCHH
Confidence            999988888888888777665443

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=1.5e-24  Score=190.38  Aligned_cols=196  Identities=17%  Similarity=0.134  Sum_probs=140.9

Q ss_pred             CceEEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 020024           30 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN  109 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~p~~~~~~  109 (332)
                      +|.+|+||||||||+.|++..+++..                       ..+.|..+...|..+               .
T Consensus         3 ~k~lVifD~DGTL~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~~---------------~   44 (226)
T d2feaa1           3 RKPFIICDFDGTITMNDNIINIMKTF-----------------------APPEWMALKDGVLSK---------------T   44 (226)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHH-----------------------SCTHHHHHHHHHHTT---------------S
T ss_pred             CCeEEEEeCCCCCcCchHHHHHHHHH-----------------------CcchHHHHHHHHHcC---------------c
Confidence            67899999999999999998887754                       123555554444322               1


Q ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHH-hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          110 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKA-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       110 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~-~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                      .+..+.+..             +   ...+.+...+.+... ...++++||+.++++.|+++|   ++++|+|++. ..+
T Consensus        45 ~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~l~pg~~~~l~~L~~~g---~~~~ivS~~~-~~~  104 (226)
T d2feaa1          45 LSIKEGVGR-------------M---FGLLPSSLKEEITSFVLEDAKIREGFREFVAFINEHE---IPFYVISGGM-DFF  104 (226)
T ss_dssp             SCHHHHHHH-------------H---HTTSBGGGHHHHHHHHHHHCCBCTTHHHHHHHHHHHT---CCEEEEEEEE-HHH
T ss_pred             ccHHHHHHH-------------H---HHHhccccHHHHHHHHHhccchhHHHHHHHHHHHhcc---cccccCCcch-hhh
Confidence            333322221             1   233444455555554 457899999999999999999   9999999986 999


Q ss_pred             HHHHHHhcCCCcceEEeeeeEEcCceecc--ccccc----CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhh
Q 020024          189 IRASFSSAGLNALNVHANEFSFKESISTG--EIIEK----VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL  262 (332)
Q Consensus       189 I~~~l~~~g~~~~~I~aN~l~~~~g~~tG--~~~~~----~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~  262 (332)
                      ++.+|+++|+. .+++||.+.++++....  ....+    ...+.+|...+++    .+. .+.+++|||||.||++|++
T Consensus       105 i~~~l~~l~~~-~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~----~~~-~~~~~i~iGDs~~Dl~~a~  178 (226)
T d2feaa1         105 VYPLLEGIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHE----LSE-PNQYIIMIGDSVTDVEAAK  178 (226)
T ss_dssp             HHHHHTTTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHH----HCC-TTCEEEEEECCGGGHHHHH
T ss_pred             HHHHHHHcCCc-cceeeeeEEEeCCcceeccccccccccccCCHHHHHHHHHH----hcC-CCceEEEEeCchhhHHHHH
Confidence            99999988764 68999999998754332  21112    2344455555544    443 3478999999999999999


Q ss_pred             hcCeeEEEcCChhHHHHhHhcCCeeeecCc
Q 020024          263 EADIGIVIGSSSSLRRVGSQFGVTFIPLYP  292 (332)
Q Consensus       263 ~Ad~gvv~~~~~~L~~~~~~~~~~~~p~~~  292 (332)
                      .||++++++   .+.+.|++.++++.|+..
T Consensus       179 ~A~~~~a~~---~~~~~~~~~~~~~~~~~d  205 (226)
T d2feaa1         179 LSDLCFARD---YLLNECREQNLNHLPYQD  205 (226)
T ss_dssp             TCSEEEECH---HHHHHHHHTTCCEECCSS
T ss_pred             HCCEEEEec---chHHHHHHcCCCeeecCC
Confidence            999766543   599999999999999876

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.82  E-value=3.7e-19  Score=152.18  Aligned_cols=137  Identities=20%  Similarity=0.243  Sum_probs=113.9

Q ss_pred             hhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceec
Q 020024          137 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESIST  216 (332)
Q Consensus       137 ~~f~G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~t  216 (332)
                      ..+.+..............+.+|+.++++.+..+|   ..++++|+++ ..++......++.  ...+++.+..+++..+
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~---~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  130 (210)
T d1j97a_          57 SLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRG---YVVAVVSGGF-DIAVNKIKEKLGL--DYAFANRLIVKDGKLT  130 (210)
T ss_dssp             HTTTTCBHHHHHHHHHTCCBCTTHHHHHHHHHHTT---CEEEEEEEEE-HHHHHHHHHHHTC--SEEEEEEEEEETTEEE
T ss_pred             HHHhhhHHHHHHHHhhhhhhhhhHHHHHHHHHHcC---CEEEeecccc-cccccchhhccch--hhhhhhhhcccccccc
Confidence            45567778888877888999999999999999999   9999999997 8888888887765  5678888888777666


Q ss_pred             ccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHHHh
Q 020024          217 GEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVG  280 (332)
Q Consensus       217 G~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~~~  280 (332)
                      +........+..|...+..++...+. ...++++||||.||++|+..||+||++++.+.|++.|
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~A  193 (210)
T d1j97a_         131 GDVEGEVLKENAKGEILEKIAKIEGI-NLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA  193 (210)
T ss_dssp             EEEECSSCSTTHHHHHHHHHHHHHTC-CGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTC
T ss_pred             ccccccccccccccchhhhHHHHhcc-cccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhC
Confidence            65555567777888888888877766 3578999999999999999999999999888776654

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.64  E-value=3.1e-15  Score=127.06  Aligned_cols=124  Identities=19%  Similarity=0.216  Sum_probs=91.8

Q ss_pred             CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccccc
Q 020024          141 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII  220 (332)
Q Consensus       141 G~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~  220 (332)
                      +....++......+...++...++..++ .+   ...+++|+++ ...+......+++  .+.++|.+.+..+...+...
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~s~~~-~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~  127 (206)
T d1rkua_          55 GLKLGDIQEVIATLKPLEGAVEFVDWLR-ER---FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGYQ  127 (206)
T ss_dssp             TCCHHHHHHHHTTCCCCTTHHHHHHHHH-TT---SEEEEEEEEE-HHHHHHHHHHTTC--CCEEEEEEEECTTSCEEEEE
T ss_pred             CCceehhhhhhhhccccchHHHHHHHhh-cC---ceEEEeccCc-hHHHHHHHHHhCC--chhhcceeeeeccccccccc
Confidence            5677777777788899999999998876 45   7999999998 7888888877665  57899999887654433222


Q ss_pred             ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHH
Q 020024          221 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR  278 (332)
Q Consensus       221 ~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~  278 (332)
                        ......+...++.+.    . ...++++||||.||++|++.||+||+|++.+.+++
T Consensus       128 --~~~~~~~~~~~~~~~----i-~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~  178 (206)
T d1rkua_         128 --LRQKDPKRQSVIAFK----S-LYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIR  178 (206)
T ss_dssp             --CCSSSHHHHHHHHHH----H-TTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHH
T ss_pred             --ccchhhHHHHHHHhc----c-cccceEEecCCccCHHHHHhCCccEEECCCHHHHH
Confidence              222223333333332    2 24799999999999999999999999988876654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.19  E-value=4.2e-10  Score=95.45  Aligned_cols=101  Identities=15%  Similarity=0.137  Sum_probs=72.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      .+.+.||+.++++.|+++|   +++.|+|.+. . .+...|+.+|+...  .|++.+     .         .....-|.
T Consensus        80 ~~~~~pgv~~~L~~L~~~g---~~~~v~Sn~~-~-~~~~~l~~~gl~~~f~~i~~s~-----~---------~~~~Kp~~  140 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESG---IQQFIYTHKG-N-NAFTILKDLGVESYFTEILTSQ-----S---------GFVRKPSP  140 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTT---CEEEEECSSC-T-HHHHHHHHHTCGGGEEEEECGG-----G---------CCCCTTSS
T ss_pred             cCcccchHHhhhhcccccc---cchhhhcccc-h-hhhhhhhhcccccccccccccc-----c---------ccccchhH
Confidence            5788999999999999999   9999999764 4 45568888887431  222211     0         00111244


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE-EcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV-IGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv-~~~~  273 (332)
                      ..++..+...+.. ..++++|||+.+|+.++..+|+..+ +..+
T Consensus       141 ~~~~~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~  183 (204)
T d2go7a1         141 EAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLES  183 (204)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred             HHHHHHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence            6667777777763 5799999999999999999998543 4433

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.17  E-value=1.8e-10  Score=99.45  Aligned_cols=99  Identities=15%  Similarity=0.206  Sum_probs=65.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH-
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ-  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~-  231 (332)
                      ...+.||+.++|+.++++|  ++++.|+|.+. ...+...++.+|+...        |+ ...++.   .......+.. 
T Consensus        89 ~~~~~~g~~~~L~~L~~~g--~~~~~v~t~~~-~~~~~~~l~~~gl~~~--------fd-~i~~~~---~~~~~k~~p~~  153 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRS--DVLLGLLTGNF-EASGRHKLKLPGIDHY--------FP-FGAFAD---DALDRNELPHI  153 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCT--TEEEEEECSSC-HHHHHHHHHTTTCSTT--------CS-CEECTT---TCSSGGGHHHH
T ss_pred             CceecCchHHHHhhhhccc--cccccccCCCc-chhhhhhhhhhccccc--------cc-cccccc---ccccccchhHH
Confidence            4678999999999999864  16889999885 8899999999887421        11 111111   0111112222 


Q ss_pred             HHHHHHHHh--CCCCCceEEEEeCCccchHHhhhcCee
Q 020024          232 AFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       232 ~l~~~~~~~--~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      .+.......  +. .+.+++|||||.+|+.++..|++.
T Consensus       154 ~~~~~~~~~~~~~-~p~~~l~VGD~~~Di~aA~~aG~~  190 (228)
T d2hcfa1         154 ALERARRMTGANY-SPSQIVIIGDTEHDIRCARELDAR  190 (228)
T ss_dssp             HHHHHHHHHCCCC-CGGGEEEEESSHHHHHHHHTTTCE
T ss_pred             HHHHhhhhcccCC-ChhHheeecCChHHHHHHHHcCCE
Confidence            233222222  22 347899999999999999999984

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=1.3e-10  Score=99.40  Aligned_cols=99  Identities=15%  Similarity=0.107  Sum_probs=73.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ..++.||+.+++++|+++|   ++++|+|++. ...+...++.+|+..  ..|++.+    +   .|.       +--+.
T Consensus        86 ~~~~~pg~~~~l~~L~~~g---~~~~i~T~~~-~~~~~~~l~~~~l~~~F~~i~~~~----~---~~~-------~Kp~~  147 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQG---LLVGLASASP-LHMLEKVLTMFDLRDSFDALASAE----K---LPY-------SKPHP  147 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEECT----T---SSC-------CTTST
T ss_pred             cccccchHHHHHHHhhhcc---cccccccccc-cccccccccccccccccccccccc----c---ccc-------chhhH
Confidence            4678899999999999999   9999999985 889999999988742  2333321    0   010       11133


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ..++..+.+.+.. ..++++||||.+|+.+++.+|+..+.
T Consensus       148 ~~~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~  186 (218)
T d1te2a_         148 QVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIV  186 (218)
T ss_dssp             HHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEE
Confidence            5566677777764 57999999999999999999985443

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.16  E-value=2.7e-09  Score=92.13  Aligned_cols=97  Identities=16%  Similarity=0.202  Sum_probs=70.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++|++|+ ++   ++++|+|.+. ...+...++.+|+..  ..|++..     .  .|.       +--+.
T Consensus        98 ~~~~~p~~~~~L~~l~-~~---~~i~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s~-----~--~~~-------~KP~~  158 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GK---YHVGMITDSD-TEYLMAHLDALGIKDLFDSITTSE-----E--AGF-------FKPHP  158 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TT---BEEEEEESSC-HHHHHHHHHHHTCGGGCSEEEEHH-----H--HTB-------CTTSH
T ss_pred             hCcccccHHHHHHHhh-cc---Cceeeeeccc-cccchhhhcccccccccccccccc-----c--ccc-------cchhh
Confidence            5788999999999996 46   8999999985 889999999888742  1333211     0  010       00134


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCeeEE
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIV  269 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~gvv  269 (332)
                      ..++..+.+.+.. ..++++|||+ .+|+.++..+|+..+
T Consensus       159 ~~~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v  197 (230)
T d1x42a1         159 RIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSI  197 (230)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred             HHHHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEE
Confidence            6667777777764 4789999998 589999999998433

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.16  E-value=6.8e-11  Score=100.83  Aligned_cols=99  Identities=16%  Similarity=0.221  Sum_probs=72.0

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      +.+.++||+.++++++++ +   ++++|+|.+. ...+...++.+|+...  .+++           +.-   ...+-.+
T Consensus        79 ~~~~~~~g~~~~L~~l~~-~---~~~~ivT~~~-~~~~~~~l~~~~l~~~f~~i~~-----------~~~---~~~~KP~  139 (207)
T d2hdoa1          79 DQIELYPGITSLFEQLPS-E---LRLGIVTSQR-RNELESGMRSYPFMMRMAVTIS-----------ADD---TPKRKPD  139 (207)
T ss_dssp             GGCEECTTHHHHHHHSCT-T---SEEEEECSSC-HHHHHHHHTTSGGGGGEEEEEC-----------GGG---SSCCTTS
T ss_pred             cccccccchhhhhhhhcc-c---cccccccccc-cccccccccccccccccccccc-----------ccc---cccchhh
Confidence            467899999999999974 5   7999999996 8999999998876321  1111           110   0011114


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI  270 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~  270 (332)
                      ...++..+.+.+.. ..++++||||.+|+.++..||+..+.
T Consensus       140 p~~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~  179 (207)
T d2hdoa1         140 PLPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGL  179 (207)
T ss_dssp             SHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             hhhhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEE
Confidence            46667777777663 47899999999999999999986554

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.15  E-value=8.1e-10  Score=94.24  Aligned_cols=100  Identities=12%  Similarity=0.161  Sum_probs=72.7

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcchH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K~  230 (332)
                      ...++||+.++++.|+++|   +++.|+|.+. ...++..++.+|+...  .+++..           -.+   ...-|.
T Consensus        93 ~~~l~~~~~~~L~~L~~~g---~~~~i~tn~~-~~~~~~~l~~~gl~~~f~~~~~~~-----------~~~---~~kp~p  154 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQG---YILAVVTNKP-TKHVQPILTAFGIDHLFSEMLGGQ-----------SLP---EIKPHP  154 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHTTCGGGCSEEECTT-----------TSS---SCTTSS
T ss_pred             ccchHHHHHHHHHHHhccC---Cccccccccc-HHHHHHHHHhcCchhhcccccccc-----------ccc---cccccc
Confidence            5789999999999999999   9999999874 8899999999887431  222211           110   011133


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      ..+...+...+.+ ..++++||||.+|+.+++.+|+. |.+.
T Consensus       155 ~~~~~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~  195 (224)
T d2hsza1         155 APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT  195 (224)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             hhhHHHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEe
Confidence            5556666666653 47999999999999999999983 4443

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.06  E-value=9.4e-10  Score=94.08  Aligned_cols=56  Identities=16%  Similarity=0.196  Sum_probs=46.3

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L~~~~  280 (332)
                      ..+..|...++.++.+.+.+ ..+++++|||.||++|++.||+||+++ +++.+++.|
T Consensus       148 ~~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A  204 (230)
T d1wr8a_         148 KPWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENA  204 (230)
T ss_dssp             CTTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTC
T ss_pred             eCCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhC
Confidence            45678999999999888874 478999999999999999999999986 445555554

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=2.1e-10  Score=95.10  Aligned_cols=98  Identities=12%  Similarity=0.040  Sum_probs=72.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .+.++||+.++|+.|+++|   +++.|+|.+....+.+..++.+++...  +.       ....        ....|...
T Consensus        44 ~~~l~pgv~e~L~~L~~~G---~~~~v~S~~~~~~~~~~~l~~~~~~~~--~~-------~~~~--------~~kp~~~~  103 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLG---VPVAAASRTSEIQGANQLLELFDLGKY--FI-------QREI--------YPGSKVTH  103 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTT---CCEEEEECCSCHHHHHHHHHHTTCGGG--CS-------EEEE--------SSSCHHHH
T ss_pred             ccccchHHHHHHHHHHHCC---CcEEEEeccccchhhccchhccccccc--ce-------eeec--------ccCCChHH
Confidence            5789999999999999999   999999987645666777777665311  00       0011        11136677


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG  271 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~  271 (332)
                      +.+.+...+.. .++++||||+..|+.+++.||+-.+.-
T Consensus       104 ~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~i~v  141 (164)
T d1u7pa_         104 FERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTCIHI  141 (164)
T ss_dssp             HHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred             HHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEE
Confidence            77788888874 589999999999999999999844433

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.06  E-value=9.7e-10  Score=92.33  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=70.1

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++|+.++++|   .+++|+|.+ +...+ ..++.+++...  .|++           +.-.     +..|
T Consensus        76 ~~~~~~~gv~~~l~~l~~~g---~~~~i~Sn~-~~~~~-~~l~~~~l~~~fd~i~~-----------~~~~-----~~~K  134 (187)
T d2fi1a1          76 EHPILFEGVSDLLEDISNQG---GRHFLVSHR-NDQVL-EILEKTSIAAYFTEVVT-----------SSSG-----FKRK  134 (187)
T ss_dssp             TSCCBCTTHHHHHHHHHHTT---CEEEEECSS-CTHHH-HHHHHTTCGGGEEEEEC-----------GGGC-----CCCT
T ss_pred             hcCcccchhHHHHHHHHhhh---ccccccccC-ccchh-hhhhhhccccccccccc-----------cccc-----cccC
Confidence            46789999999999999999   999999965 35554 57888776421  2221           1100     0112


Q ss_pred             --HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEcCChhHHH
Q 020024          230 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGSSSSLRR  278 (332)
Q Consensus       230 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~~~~~L~~  278 (332)
                        ...++..+.+++.   +.++|||||.+|+.+++.||+- |.+.....+.+
T Consensus       135 P~p~~~~~~~~~~~~---~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~  183 (187)
T d2fi1a1         135 PNPESMLYLREKYQI---SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQ  183 (187)
T ss_dssp             TSCHHHHHHHHHTTC---SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHH
T ss_pred             CCHHHHHHHHHHcCC---CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHh
Confidence              3445556666665   4699999999999999999995 55554444443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.04  E-value=1.4e-09  Score=96.67  Aligned_cols=55  Identities=20%  Similarity=0.314  Sum_probs=46.7

Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHhH
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS  281 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~~  281 (332)
                      +.+|...++.+++.++.+ .++++++|||.||++||+.|++||+|++ .+.+++.|.
T Consensus       211 ~~~K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~  266 (285)
T d1nrwa_         211 KASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD  266 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCS
T ss_pred             cchhhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence            458999999999988874 5789999999999999999999999964 466776663

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.03  E-value=9.8e-10  Score=94.83  Aligned_cols=56  Identities=21%  Similarity=0.209  Sum_probs=46.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEc-CChhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~-~~~~L~~~~  280 (332)
                      ..+.+|...++.++..++.+ ..+++++|||.||++|++.|+++|+++ +.+.+++.|
T Consensus       147 ~~~~~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~a  203 (225)
T d1l6ra_         147 NRGEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVS  203 (225)
T ss_dssp             ETTCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHC
T ss_pred             CCccchHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhC
Confidence            44668999999999988874 478999999999999999999999996 456665544

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.01  E-value=1.1e-10  Score=102.70  Aligned_cols=97  Identities=13%  Similarity=0.125  Sum_probs=68.4

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcch--H
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--V  230 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K--~  230 (332)
                      ...+.||+.++|+.|+++|   +++.|+|.+. ..++...++.+|+...  +      .+...++.-     .+..|  .
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g---~~i~i~Tn~~-~~~~~~~l~~~~l~~~--f------~d~~~~~d~-----~~~~KP~p  159 (257)
T d1swva_          97 YASPINGVKEVIASLRERG---IKIGSTTGYT-REMMDIVAKEAALQGY--K------PDFLVTPDD-----VPAGRPYP  159 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEBCSSC-HHHHHHHHHHHHHTTC--C------CSCCBCGGG-----SSCCTTSS
T ss_pred             cCccCCcHHHHHHHHHhcc---cceeecCCCc-hhhHHHHHHHHhhccc--c------ccccccccc-----ccccccCh
Confidence            4679999999999999999   9999999875 8899999988765321  1      111111110     00112  2


Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI  266 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~  266 (332)
                      ..+...+.+.+..+..+++|||||.+|+.+.+.||+
T Consensus       160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~  195 (257)
T d1swva_         160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM  195 (257)
T ss_dssp             HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred             HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence            344555666665444689999999999999999997

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.00  E-value=7.6e-10  Score=93.98  Aligned_cols=100  Identities=12%  Similarity=0.118  Sum_probs=73.9

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ....+.||+.++++.++.+    .+++|+|.+. ...++..++.+|+...  +       +.++++.     ..+..|..
T Consensus        81 ~~~~~~~~~~~~l~~l~~~----~~~~i~t~~~-~~~~~~~l~~~gl~~~--f-------d~v~~~~-----~~~~~~p~  141 (210)
T d2ah5a1          81 YEAQLFPQIIDLLEELSSS----YPLYITTTKD-TSTAQDMAKNLEIHHF--F-------DGIYGSS-----PEAPHKAD  141 (210)
T ss_dssp             GSCEECTTHHHHHHHHHTT----SCEEEEEEEE-HHHHHHHHHHTTCGGG--C-------SEEEEEC-----SSCCSHHH
T ss_pred             hcccchhHHHHHHhhhhcc----cchhhccccc-chhhhHHHHhhccccc--c-------ccccccc-----cccccccc
Confidence            3578899999999999865    4899999985 8999999999887421  1       1111111     11234667


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      .+...++..+.. ..++++||||.+|+.++..||+ .|.+.
T Consensus       142 ~~~~~~~~~~~~-~~~~v~VGDs~~Di~aa~~aGi~~i~v~  181 (210)
T d2ah5a1         142 VIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             ccchhhhhhhcc-cccceeecCCHHHHHHHHHcCCeEEEEc
Confidence            777778877774 5799999999999999999998 45554

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.93  E-value=1.2e-08  Score=86.75  Aligned_cols=99  Identities=15%  Similarity=0.136  Sum_probs=72.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ......|++.++++.+++.+   .+++|+|.+. ...++..++..++..  ..+++..          .      .+..|
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~---~~~~i~tn~~-~~~~~~~~~~~~~~~~fd~~~~s~----------~------~~~~K  149 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRG---LKLAILSNGS-PQSIDAVVSHAGLRDGFDHLLSVD----------P------VQVYK  149 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTT---CEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEESG----------G------GTCCT
T ss_pred             ccccccchhHHHHHHHHhcC---CeEEeecchH-HHHHHHHHhhccccccccceeeee----------e------eeccc
Confidence            46789999999999999998   9999999885 888888888766532  1232211          0      11123


Q ss_pred             H--HHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          230 V--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       230 ~--~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .  ..++..+.+.+.. ..+++||||+..|+.+++.||+- |.+.
T Consensus       150 P~p~~~~~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~  193 (220)
T d1zrna_         150 PDNRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWIN  193 (220)
T ss_dssp             TSHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             cHHHHHHHHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEc
Confidence            2  5666667777764 57999999999999999999984 4454

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2e-08  Score=86.06  Aligned_cols=102  Identities=12%  Similarity=0.111  Sum_probs=71.9

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeeeEEcCceecccccccCCCCcchHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ  231 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~-~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~  231 (332)
                      ...++||+.+++..++++|   ++++|+|.+- ...+...++..|+... ..++.  .+++.    ..      +--+..
T Consensus       125 ~~~~~pg~~e~l~~L~~~g---~~l~i~Tn~~-~~~~~~~~~~~~~~~~~~~~~~--~~d~~----~~------~KP~p~  188 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAG---MKVYIYSSGS-VEAQKLLFGHSTEGDILELVDG--HFDTK----IG------HKVESE  188 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHTBTTBCCGGGCSE--EECGG----GC------CTTCHH
T ss_pred             ccccCCCHHHHHHHHhhcc---CceeecCCCc-HHHHHHHHHHcCcchhhhhcce--eeccc----cc------cCCCcH
Confidence            4678999999999999999   9999999984 8888888887765311 10000  01110    00      111446


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee-EEEc
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG  271 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-vv~~  271 (332)
                      .+...+.+.+.. ..++++|||+.+|+.+++.||+. |.+.
T Consensus       189 ~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~  228 (253)
T d1zs9a1         189 SYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVV  228 (253)
T ss_dssp             HHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence            666677777774 48999999999999999999984 4443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.89  E-value=1e-08  Score=87.32  Aligned_cols=46  Identities=20%  Similarity=0.225  Sum_probs=35.3

Q ss_pred             CcchHHHHHHHHH---HhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          226 PIDKVQAFNNTLE---KYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       226 ~~~K~~~l~~~~~---~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      +.+|...++.++.   ..+.+ ..+++++|||.||++|++.||+||+|.+
T Consensus       182 ~~~K~~~~~~l~~~~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~~vaV~n  230 (232)
T d1xvia_         182 SAGKDQAANWIIATYQQLSGK-RPTTLGLGDGPNDAPLLEVMDYAVIVKG  230 (232)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSS-CCEEEEEESSGGGHHHHHTSSEEEECCC
T ss_pred             CchHHHHHHHHHHHHHHcCCC-hhcEEEEcCCHhHHHHHHhCCeEEEEeC
Confidence            4467666665553   33443 4689999999999999999999999974

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.88  E-value=4.6e-09  Score=84.46  Aligned_cols=91  Identities=23%  Similarity=0.298  Sum_probs=72.6

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHH
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN  234 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~  234 (332)
                      ++||++++.++.|++.|   +.+.|+|+- +......+.+.+|++  ++++                 .+...+|...++
T Consensus        21 ~lr~~a~~~I~~L~~~G---i~v~ilTGD-~~~~a~~ia~~lgI~--~v~~-----------------~~~p~~k~~~v~   77 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMG---IKVGMITGD-NWRSAEAISRELNLD--LVIA-----------------EVLPHQKSEEVK   77 (135)
T ss_dssp             CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHHTCS--EEEC-----------------SCCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHcC---CEEEEEcCc-chhhhhHHHhhhhhh--hhcc-----------------ccchhHHHHHHH
Confidence            69999999999999999   999999987 477888887888873  3332                 123446888777


Q ss_pred             HHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCCh
Q 020024          235 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS  274 (332)
Q Consensus       235 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~  274 (332)
                      ++..      ...+.++|||.||.++|..||+||+++...
T Consensus        78 ~~q~------~~~v~~vGDg~nD~~aL~~Advgia~~~~~  111 (135)
T d2b8ea1          78 KLQA------KEVVAFVGDGINDAPALAQADLGIAVGSGS  111 (135)
T ss_dssp             HHTT------TSCEEEEECSSSSHHHHHHSSEEEEECCC-
T ss_pred             HHHc------CCEEEEEeCCCCcHHHHHhCCeeeecCccC
Confidence            6542      257889999999999999999999998664

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=2.6e-09  Score=88.11  Aligned_cols=108  Identities=12%  Similarity=0.131  Sum_probs=70.8

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-CCCc--ceEEeeeeEEcCceecccccccCCCCcch
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ...+++|..+++..++.+|   +.+.|+|.+. .......+..+ ++..  ..+++.+       ..|.       +--+
T Consensus        82 ~~~~~~~~~~l~~~l~~~~---~~~~i~t~~~-~~~~~~~~~~~~~l~~~fd~v~~s~-------~~~~-------~Kp~  143 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEIRDAADHIYLSQ-------DLGM-------RKPE  143 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTT---CEEEEEECCC-CCTTSCCGGGCHHHHHHCSEEEEHH-------HHTC-------CTTC
T ss_pred             ccccCchhHHHHHHHHhcC---CeEEEEeCcc-HHHHHHHHHHcccchhhccceeecc-------cccc-------cccc
Confidence            3679999999999999998   9999999764 33332222222 2110  1233211       0011       1113


Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCChhHHHH
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRV  279 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~~~L~~~  279 (332)
                      ....+..++..+.+ ..++++||||.+|+.++..||+ .|.+.++..+..+
T Consensus       144 ~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~  193 (197)
T d2b0ca1         144 ARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDY  193 (197)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred             hHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence            45666677777764 5799999999999999999998 7888877655443

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.86  E-value=1e-07  Score=82.55  Aligned_cols=186  Identities=18%  Similarity=0.315  Sum_probs=130.9

Q ss_pred             EEEEeCCCCcccccchHHHHHHHHHhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHH---HhhcCCCCcccC
Q 020024           33 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQC---IESFMPSEKVEN  109 (332)
Q Consensus        33 lvi~DFD~TiT~~Dt~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~---~~~~~p~~~~~~  109 (332)
                      ++++|+.|-|+-.|.--.++....   |.                  ..-++.++.  .++|...   +..|.+-     
T Consensus         1 ~fvtDcEGPlslnDnA~E~~a~~~---~~------------------grfF~~lS~--yDD~L~~E~~reGY~aG-----   52 (308)
T d1y8aa1           1 MFFTDWEGPWILTDFALELCMAVF---NN------------------ARFFSNLSE--YDDYLAYEVRREGYEAG-----   52 (308)
T ss_dssp             EEEECSBTTTBCCCHHHHHHHHHH---CC------------------HHHHHHHHH--HHHHHHHTTCCTTCCTT-----
T ss_pred             CceeccCCCCcccccHHHHHHhcC---CC------------------cchhhhhhh--hhhHHHHHhhccCCCCc-----
Confidence            478999999999997555442211   11                  123333321  2333322   2233332     


Q ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh-cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 020024          110 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL  188 (332)
Q Consensus       110 ~~~~~~~~~l~~l~~~e~~s~~rv~~~~~f~G~~~~~l~~~~~-~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~  188 (332)
                      .+..=.++|+..                  .|++.+++.++.+ ++.+-||+.+.++.+++.    .+.+|||-++ ..+
T Consensus        53 ~TLKLIvPFl~a------------------~Gvt~edL~~fSE~~~~lvpgA~~~lk~l~~~----m~~yIvSTSY-~qy  109 (308)
T d1y8aa1          53 YTLKLLTPFLAA------------------AGVKNRDVERIAELSAKFVPDAEKAMATLQER----WTPVVISTSY-TQY  109 (308)
T ss_dssp             THHHHHHHHHHH------------------TTCCHHHHHHHHHHHCCBCTTHHHHHHHHHTT----CEEEEEEEEE-HHH
T ss_pred             cchhhHHHHHHH------------------hCCCHHHHHHHhhhceeecCCHHHHHHHHHhh----CCcEEEeccH-HHH
Confidence            455667777632                  4899999999987 799999999999999975    7999999999 899


Q ss_pred             HHHHHHhcCCCcceEEeeeeEEcC-ce---------------ecc-------------------cccc--cCCCCcchHH
Q 020024          189 IRASFSSAGLNALNVHANEFSFKE-SI---------------STG-------------------EIIE--KVESPIDKVQ  231 (332)
Q Consensus       189 I~~~l~~~g~~~~~I~aN~l~~~~-g~---------------~tG-------------------~~~~--~~~~~~~K~~  231 (332)
                      |+.+....|++ .+++++++.+++ ..               ..+                   ++..  +...+..|.+
T Consensus       110 i~al~~~~gfp-~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~  188 (308)
T d1y8aa1         110 LRRTASMIGVR-GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAK  188 (308)
T ss_dssp             HHHHHHHTTCC-SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHH
T ss_pred             HHHHHhhcCCC-ceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHH
Confidence            99999999997 569999998873 11               011                   1110  2445567888


Q ss_pred             HHHHHHHHhCCCCCceEEEEeCCccchHHhhhc----CeeEEEcCC
Q 020024          232 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSS  273 (332)
Q Consensus       232 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A----d~gvv~~~~  273 (332)
                      +++.++...+.   ....|||||+||..||+.+    |++|.++.+
T Consensus       189 i~~~~~~~~~~---~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN  231 (308)
T d1y8aa1         189 IMRGYCESKGI---DFPVVVGDSISDYKMFEAARGLGGVAIAFNGN  231 (308)
T ss_dssp             HHHHHHHHHTC---SSCEEEECSGGGHHHHHHHHHTTCEEEEESCC
T ss_pred             HHHhhcccccC---CcceeccCccccHHHHHHHhcCCCeeEEecCc
Confidence            88888877776   3469999999999999986    567778877

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.84  E-value=6e-09  Score=88.96  Aligned_cols=102  Identities=14%  Similarity=0.176  Sum_probs=70.0

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++++|   +.++|+|.+   ......++..|+...        |+ .+.++.   ....+--+...
T Consensus        89 ~~~~~~g~~~~l~~l~~~~---~~i~i~s~~---~~~~~~l~~~~l~~~--------f~-~i~~~~---~~~~~KP~~~~  150 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNK---IKIALASAS---KNGPFLLERMNLTGY--------FD-AIADPA---EVAASKPAPDI  150 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTT---CEEEECCSC---TTHHHHHHHTTCGGG--------CS-EECCTT---TSSSCTTSTHH
T ss_pred             cccccCCceeccccccccc---cceEEEeec---chhhHHHHhhccccc--------cc-cccccc---cccccccChHH
Confidence            3578999999999999998   999999964   345677777776321        00 111110   00011113466


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ++..+...+.+ ..++++|||+.+|+.+++.||+ .|.++.+
T Consensus       151 ~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         151 FIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             HHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             HHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence            77788888874 5789999999999999999998 5556543

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.81  E-value=1.1e-08  Score=87.28  Aligned_cols=104  Identities=15%  Similarity=0.202  Sum_probs=68.5

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      ...+.||+.++++.++      .+.+|+|++. ...+...++.+|+...        |+...+++.-.+. ....-+...
T Consensus        83 ~~~~~~g~~~~L~~l~------~~~~i~t~~~-~~~~~~~l~~~~l~~~--------f~~~~~~~~~~~~-~~~KP~~~~  146 (222)
T d2fdra1          83 DVKIIDGVKFALSRLT------TPRCICSNSS-SHRLDMMLTKVGLKPY--------FAPHIYSAKDLGA-DRVKPKPDI  146 (222)
T ss_dssp             HCCBCTTHHHHHHHCC------SCEEEEESSC-HHHHHHHHHHTTCGGG--------TTTCEEEHHHHCT-TCCTTSSHH
T ss_pred             ccchhhhHHHHhhhcc------ccceeeeecc-hhhhhhhhcccccccc--------cceeecccccccc-cccccCHHH
Confidence            5789999999998765      4667889885 8899999999887421        1111111110000 000012345


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      +...+.+.+.. ..++++||||..|+.+++.+++ .|.+...
T Consensus       147 ~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~  187 (222)
T d2fdra1         147 FLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGA  187 (222)
T ss_dssp             HHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEccC
Confidence            55566667763 5799999999999999999998 4555543

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=3.1e-08  Score=85.78  Aligned_cols=97  Identities=16%  Similarity=0.237  Sum_probs=70.7

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeeeEEcCceecccccccCCCCcch
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK  229 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~--~I~aN~l~~~~g~~tG~~~~~~~~~~~K  229 (332)
                      ....+.||+.++++.|++ +   ++++|+|.+ ....+...++..|+...  .+++.     +.           .+..|
T Consensus       106 ~~~~~~~~~~~~L~~L~~-~---~~l~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~s-----~~-----------~~~~K  164 (247)
T d2gfha1         106 QHMILADDVKAMLTELRK-E---VRLLLLTNG-DRQTQREKIEACACQSYFDAIVIG-----GE-----------QKEEK  164 (247)
T ss_dssp             HTCCCCHHHHHHHHHHHT-T---SEEEEEECS-CHHHHHHHHHHHTCGGGCSEEEEG-----GG-----------SSSCT
T ss_pred             ccCccCccHHHHHHHhhc-c---cceEEeecc-cchhhhhhhhhccccccccccccc-----cc-----------cccch
Confidence            357899999999999984 6   899999987 48899999998887421  22221     00           11123


Q ss_pred             --HHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCee-EEE
Q 020024          230 --VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI  270 (332)
Q Consensus       230 --~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-vv~  270 (332)
                        ...++..+...+.. ..++++|||+. +|+.++..+|+. +++
T Consensus       165 P~p~~~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~  208 (247)
T d2gfha1         165 PAPSIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVW  208 (247)
T ss_dssp             TCHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred             hhhhhHHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEE
Confidence              35667777777764 47899999996 899999999984 443

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.76  E-value=1.5e-07  Score=80.94  Aligned_cols=108  Identities=13%  Similarity=0.103  Sum_probs=73.6

Q ss_pred             CHHHHHHHh---hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeeeEEcCceecc
Q 020024          143 NLEDIKKAG---ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTG  217 (332)
Q Consensus       143 ~~~~l~~~~---~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG  217 (332)
                      ..+...++.   ......|++.+.+++++  +   ..+.++|.+. ...+...+...++..  ..|++.+     .  . 
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~L~~l~--~---~~~~v~s~~~-~~~~~~~~~~~~~~~~fd~v~~s~-----~--~-  143 (245)
T d1qq5a_          78 DESFLADMAQAYNRLTPYPDAAQCLAELA--P---LKRAILSNGA-PDMLQALVANAGLTDSFDAVISVD-----A--K-  143 (245)
T ss_dssp             CHHHHHHHHGGGGSCCBCTTHHHHHHHHT--T---SEEEEEESSC-HHHHHHHHHHTTCGGGCSEEEEGG-----G--G-
T ss_pred             HHHHHHHHHhcccccccchhhhHHHHHHh--h---hceeEEeccc-hHHHHHHHhhcccccccccccccc-----c--c-
Confidence            344444443   35788999999999886  4   7888898885 788888888877632  1233211     0  1 


Q ss_pred             cccccCCCCcch--HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          218 EIIEKVESPIDK--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       218 ~~~~~~~~~~~K--~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                              +..|  ....+..+++.+.. ..++++|||+.+|+.++..||+ .|.++..
T Consensus       144 --------~~~KP~p~~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         144 --------RVFKPHPDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             --------TCCTTSHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred             --------cccCccHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence                    1123  24556667777774 5799999999999999999998 4556544

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.74  E-value=3.9e-09  Score=87.45  Aligned_cols=108  Identities=18%  Similarity=0.202  Sum_probs=65.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEccc-------cC-------HHHHHHHHHhcCCCcceEEeeeeEEcCceeccc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC-------WC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGE  218 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g-------~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~  218 (332)
                      .+.+.||..++++.++++|   ++++|+|..       ++       ..++...+...|+....|+.......++..   
T Consensus        28 ~~~~~pgv~e~L~~L~~~g---~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~---  101 (161)
T d2fpwa1          28 KLAFEPGVIPQLLKLQKAG---YKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD---  101 (161)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---EEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCS---
T ss_pred             HceECccHHHHHHHHHHcC---CceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeecccccccccc---
Confidence            3678899999999999999   999999952       11       123455566656543344332211111110   


Q ss_pred             ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          219 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       219 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ...|.      ...+.+++.+++.+ ..+++||||+.+|+.|+..|++ +|.++++
T Consensus       102 ~~KP~------p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1         102 CRKPK------VKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             SSTTS------SGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             ccccc------cHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            00111      13334455555653 4799999999999999999999 5666654

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.71  E-value=2.6e-08  Score=82.95  Aligned_cols=110  Identities=17%  Similarity=0.178  Sum_probs=78.7

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccc------------cc-
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI------------IE-  221 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~------------~~-  221 (332)
                      ++||+..+.++.|++.|   +++.++|+- +......+.++.|+..     +..+..+...+|.-            .. 
T Consensus        20 p~R~~~~~~I~~l~~~G---I~v~miTGD-~~~tA~~ia~~~Gi~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   90 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAG---IRVIMITGD-NKGTAIAICRRIGIFG-----ENEEVADRAYTGREFDDLPLAEQREACRR   90 (168)
T ss_dssp             CBCTTHHHHHHHHHHTT---CEEEEECSS-CHHHHHHHHHHTTSSC-----TTCCCTTTEEEHHHHHHSCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHCc---CEEEEECCC-CHHHHHHHHHHcCCCC-----CccccccccccccccchhhHHHHhhhhhh
Confidence            68999999999999999   999999987 4777777888888621     11111111111100            00 


Q ss_pred             ----cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCChhHHH
Q 020024          222 ----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR  278 (332)
Q Consensus       222 ----~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~~~L~~  278 (332)
                          .-.++.+|...++.+...     +..+.++|||.||.++|+.||+||.++....+++
T Consensus        91 ~~v~ar~~p~~K~~lv~~l~~~-----g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~  146 (168)
T d1wpga2          91 ACCFARVEPSHKSKIVEYLQSY-----DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAK  146 (168)
T ss_dssp             CCEEESCCHHHHHHHHHHHHHT-----TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHH
T ss_pred             hhhhhccchhHHHHHHHHHHhc-----ccceeEEecCCCCHHHHHhCCEEEEeccccHHHH
Confidence                124566899888877653     3578999999999999999999999997654443

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.7e-08  Score=82.29  Aligned_cols=108  Identities=12%  Similarity=0.069  Sum_probs=69.9

Q ss_pred             HHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHHhcCCC--cceEEeeeeEEcCceeccccccc
Q 020024          148 KKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLN--ALNVHANEFSFKESISTGEIIEK  222 (332)
Q Consensus       148 ~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~--~~~I~aN~l~~~~g~~tG~~~~~  222 (332)
                      ........++||+.+++..++++|   ++++|+|.+..   ...+.......++.  ...|++..       -.|.    
T Consensus        92 ~~~~~~~~~~~~~~~~l~~L~~~~---~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~-------~~~~----  157 (225)
T d1zd3a1          92 DKAISARKINRPMLQAALMLRKKG---FTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC-------QVGM----  157 (225)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH-------HHTC----
T ss_pred             HHHhhcCCCCccHHHHHHHHHhcc---CccccccccchhhHHHHHHHHhhhcChHhhccEEEecc-------cccc----
Confidence            344567899999999999999999   99999997531   11222222222221  12333321       0111    


Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                         +--+...++..++..+.. ..++++|||+.+|+.+++.+|+ +|.+..+
T Consensus       158 ---~KP~~~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         158 ---VKPEPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             ---CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             ---chhHHHHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence               111345666677777764 4789999999999999999999 5666644

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.69  E-value=1.2e-08  Score=86.65  Aligned_cols=118  Identities=14%  Similarity=0.100  Sum_probs=76.0

Q ss_pred             hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccC---HHHHHHHHHhcCCCc--ceEEeeeeEEcCceecccccccCCC
Q 020024          151 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC---GDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVES  225 (332)
Q Consensus       151 ~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s---~~~I~~~l~~~g~~~--~~I~aN~l~~~~g~~tG~~~~~~~~  225 (332)
                      .....++||+.+++.+++++|   .++.|+|.+..   .......+...|+.+  ..+++.+-       .|.       
T Consensus        93 ~~~~~~~~~~~~~L~~L~~~~---~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~-------~~~-------  155 (222)
T d1cr6a1          93 MAARSINRPMLQAAIALKKKG---FTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQ-------VGM-------  155 (222)
T ss_dssp             HHTCEECHHHHHHHHHHHHTT---CEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHH-------HSC-------
T ss_pred             HhcCCCCccHHHHHHHHHhcC---CceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhh-------ccC-------
Confidence            446789999999999999999   99999997421   223444444444321  23333210       010       


Q ss_pred             CcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEcCC-hhHHHHhHhcCCe
Q 020024          226 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSS-SSLRRVGSQFGVT  286 (332)
Q Consensus       226 ~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~~~-~~L~~~~~~~~~~  286 (332)
                      +--....++..+...+.. ..++++|||+.+|+.+++.+|+ +|.+..+ ..+.++.+-.|+.
T Consensus       156 ~KP~p~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~~~~~~~  217 (222)
T d1cr6a1         156 IKPEPQIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGTQ  217 (222)
T ss_dssp             CTTCHHHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHHHHHSCC
T ss_pred             CCCChHHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHHHhhCCC
Confidence            011235555666666664 4789999999999999999998 6666644 3455555445654

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.36  E-value=3.5e-07  Score=79.07  Aligned_cols=64  Identities=16%  Similarity=0.186  Sum_probs=55.4

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEE-cCChhHHHHhHhcCCee
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI-GSSSSLRRVGSQFGVTF  287 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~-~~~~~L~~~~~~~~~~~  287 (332)
                      ...+.+|...++.+++..+.+ ..+++++|||.||++|++.||+||++ ++.+.|+++|...+++-
T Consensus       157 ~~~~~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~  221 (244)
T d1s2oa1         157 LPQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSR  221 (244)
T ss_dssp             EETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTT
T ss_pred             EeCccchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccc
Confidence            345668999999999988874 47899999999999999999999999 46789999999887663

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.35  E-value=3.4e-07  Score=73.23  Aligned_cols=97  Identities=9%  Similarity=0.056  Sum_probs=53.4

Q ss_pred             CCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhc--------CCCcceEEeeeeEEcCceecccccccCC
Q 020024          155 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSA--------GLNALNVHANEFSFKESISTGEIIEKVE  224 (332)
Q Consensus       155 ~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~--------g~~~~~I~aN~l~~~~g~~tG~~~~~~~  224 (332)
                      .+.||+.++++.++++|   +.++++|+--  +...+...|..+        +.. ...+..    .   ..+..   ..
T Consensus        36 ~~~p~v~~~l~~l~~~G---~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~-~~~~~~----~---~~~~~---~~  101 (149)
T d1ltqa1          36 VINPMVVELSKMYALMG---YQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-LVMQCQ----R---EQGDT---RK  101 (149)
T ss_dssp             CBCHHHHHHHHHHHHTT---CEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-CSEEEE----C---CTTCC---SC
T ss_pred             ccCHHHHHHHHHHHhcc---CeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCc-EEEeec----c---ccccc---CC
Confidence            56899999999999999   9999999731  011222333221        111 000000    0   00000   01


Q ss_pred             CCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEE
Q 020024          225 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV  269 (332)
Q Consensus       225 ~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv  269 (332)
                      ...-|...++++..    ..+..+++|||+.+|+.|++.+|+.++
T Consensus       102 d~~~k~~~l~~~~~----~~~~i~~~igD~~~dv~a~~~~Gi~~~  142 (149)
T d1ltqa1         102 DDVVKEEIFWKHIA----PHFDVKLAIDDRTQVVEMWRRIGVECW  142 (149)
T ss_dssp             HHHHHHHHHHHHTT----TTCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred             chHHHHHHHHHhcc----CCCceEEEEcCCHHHHHHHHHCCCcEE
Confidence            11224444444332    122345678999999999999998543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.15  E-value=3.6e-06  Score=71.99  Aligned_cols=112  Identities=12%  Similarity=0.076  Sum_probs=68.6

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEcc-------ccC-------HHHHHHHHHhcCCCcceEEeeeeEEcCceecccc
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSY-------CWC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI  219 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~-------g~s-------~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~  219 (332)
                      +.+.||+.++|+.|+++|   +.++|||-       .++       ...+...++..|+....++..... .++.. ...
T Consensus        47 ~~l~pgv~e~L~~L~~~G---~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~-~~~~~-~~~  121 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAG---IPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYH-EAGVG-PLA  121 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHT---CCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCC-TTCCS-TTC
T ss_pred             eEecccHHHHHHHHHhhC---CeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccc-ccccc-ccc
Confidence            678999999999999999   99999993       111       123444455556433344433221 11110 000


Q ss_pred             cccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          220 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       220 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      ...+.+.--+...+.+.++.++.+ .++++||||+.+|+.++..|++ .+++.
T Consensus       122 ~~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~  173 (209)
T d2o2xa1         122 IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLV  173 (209)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred             ccccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence            011111111235666677777774 4799999999999999999998 44443

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.14  E-value=5.5e-06  Score=68.97  Aligned_cols=84  Identities=19%  Similarity=0.323  Sum_probs=64.3

Q ss_pred             HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceecccccccCCCCcchHHHHHHHHHHhCCC
Q 020024          164 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD  243 (332)
Q Consensus       164 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~l~~~~~~~~~~  243 (332)
                      ++.++..|   +.+.|+|+.- ...+...+...++.  .++.           +        ..+|...++.++.+++..
T Consensus        41 i~~l~~~g---i~~~iis~~~-~~~v~~~~~~l~~~--~~~~-----------~--------~~~K~~~l~~~~~~~~i~   95 (177)
T d1k1ea_          41 IKMLMDAD---IQVAVLSGRD-SPILRRRIADLGIK--LFFL-----------G--------KLEKETACFDLMKQAGVT   95 (177)
T ss_dssp             HHHHHHTT---CEEEEEESCC-CHHHHHHHHHHTCC--EEEE-----------S--------CSCHHHHHHHHHHHHTCC
T ss_pred             HHHHhhhc---EEEEEecCCc-hhHHHHHHhhhccc--cccc-----------c--------cccHHHHHHHHHHHhcCC
Confidence            56677778   9999999875 46666666665542  2221           1        235888899998888874


Q ss_pred             CCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          244 RKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       244 ~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                       .++++|+||+.||++||+.|++++++++.
T Consensus        96 -~~~v~~vGDd~nDl~~l~~~g~siap~nA  124 (177)
T d1k1ea_          96 -AEQTAYIGDDSVDLPAFAACGTSFAVADA  124 (177)
T ss_dssp             -GGGEEEEECSGGGHHHHHHSSEEEECTTS
T ss_pred             -cceeEEecCCccHHHHHhhCCeEEEcCCc
Confidence             58999999999999999999999988865

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=1.7e-06  Score=75.45  Aligned_cols=57  Identities=19%  Similarity=0.312  Sum_probs=48.4

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHhH
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS  281 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~~  281 (332)
                      ..+.+|...++.+++.++.. .++++++|||.||++|++.|++||+|++ .+.|++.|.
T Consensus       186 p~~~sK~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~  243 (269)
T d1rlma_         186 IPGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR  243 (269)
T ss_dssp             CTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCS
T ss_pred             cCchHHHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence            34567999999999988874 4789999999999999999999999964 467777774

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.03  E-value=1.1e-06  Score=81.95  Aligned_cols=109  Identities=14%  Similarity=0.095  Sum_probs=67.0

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc----ceEEeeeeEEc------Cceecccccc----
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA----LNVHANEFSFK------ESISTGEIIE----  221 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~----~~I~aN~l~~~------~g~~tG~~~~----  221 (332)
                      .+||+.++|+.|+++|   +++.|+|+.- ....+.+++.+|+..    ..+++..=...      +....++..+    
T Consensus       216 p~~~v~~~l~~lk~aG---i~v~i~Tg~~-~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~  291 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAG---FELGIATGRP-YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (380)
T ss_dssp             CHHHHHHHHHHHHHTT---CEEEEECSSC-HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             chhhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH
Confidence            4559999999999999   9999999985 889999999988732    22332210000      0000011100    


Q ss_pred             -----cCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcC---eeEEEcCC
Q 020024          222 -----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD---IGIVIGSS  273 (332)
Q Consensus       222 -----~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad---~gvv~~~~  273 (332)
                           .......|....+    ..+. .+..++|+|||.+|+++++.||   +||.++-.
T Consensus       292 ~~~~~~~~~~~~k~~iv~----~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~  346 (380)
T d1qyia_         292 AALYGNNRDKYESYINKQ----DNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK  346 (380)
T ss_dssp             HHHHCCCGGGHHHHHHCC----TTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred             HHHHHcCCCHHHHHHHHH----HhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence                 0011112222221    1222 2468999999999999999999   78776643

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.92  E-value=5.5e-06  Score=72.09  Aligned_cols=58  Identities=17%  Similarity=0.358  Sum_probs=49.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHhH
Q 020024          223 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS  281 (332)
Q Consensus       223 ~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~~  281 (332)
                      ...+.+|...++.+++.++.. ..+++++|||.||++|+..|+++|+|++ .+.|++.|.
T Consensus       181 ~p~~~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~  239 (260)
T d2rbka1         181 TAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD  239 (260)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSS
T ss_pred             EeCCCCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCC
Confidence            344567999999999988874 4799999999999999999999999985 477888774

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=6.4e-06  Score=71.66  Aligned_cols=56  Identities=18%  Similarity=0.331  Sum_probs=46.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC-ChhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~-~~~L~~~~  280 (332)
                      ..+.+|...++.+++..+.+ ..+++++|||.||++|++.|++||+|++ .+.|++.|
T Consensus       193 p~~~~K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a  249 (271)
T d1rkqa_         193 DKRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVA  249 (271)
T ss_dssp             ETTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHC
T ss_pred             CCCCCcccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            34557999999999988874 4689999999999999999999999964 46666665

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=3.5e-05  Score=63.77  Aligned_cols=108  Identities=13%  Similarity=0.155  Sum_probs=64.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCCCCcEEEEcccc-------C-------HHHHHHHHHhcCCCcceE-EeeeeEEcCceecc
Q 020024          153 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-------GDLIRASFSSAGLNALNV-HANEFSFKESISTG  217 (332)
Q Consensus       153 ~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~-------s-------~~~I~~~l~~~g~~~~~I-~aN~l~~~~g~~tG  217 (332)
                      ++.+.||+.++++.|+++|   +.++|+|.--       +       ..++...+...|+....+ +|-. .-+++  .+
T Consensus        25 ~~~~~~gv~e~l~~L~~~g---~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~-~p~~~--~~   98 (182)
T d2gmwa1          25 NFEFIDGVIDAMRELKKMG---FALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPH-HPQGS--VE   98 (182)
T ss_dssp             GCCBCTTHHHHHHHHHHTT---CEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECC-BTTCS--SG
T ss_pred             HeeECCCHHHHHHHHhhcC---chhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccc-ccccc--cc
Confidence            3578899999999999999   9999999631       0       012222233334322222 2211 00111  01


Q ss_pred             cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCee
Q 020024          218 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG  267 (332)
Q Consensus       218 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g  267 (332)
                      .+...+.+.--+...+...+++++.+ ..+++|||||.+|+.++..|+++
T Consensus        99 ~~~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~  147 (182)
T d2gmwa1          99 EFRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG  147 (182)
T ss_dssp             GGBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred             cccccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCC
Confidence            11111222222335666677777763 57899999999999999999984

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.83  E-value=7.7e-06  Score=71.42  Aligned_cols=56  Identities=21%  Similarity=0.314  Sum_probs=47.1

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+.+|...++.++..++.. .++++++|||.||++|++.|++||++++. +.+++.|
T Consensus       186 ~~~~~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A  242 (267)
T d1nf2a_         186 PKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEAS  242 (267)
T ss_dssp             CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHC
T ss_pred             CCCCchhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            34557999999999988874 57899999999999999999999999744 5666666

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.81  E-value=9.2e-06  Score=69.05  Aligned_cols=50  Identities=26%  Similarity=0.206  Sum_probs=41.1

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS  273 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~  273 (332)
                      ..+.+|...++.++..++.-...+++++|||.||++|++.||+||++++.
T Consensus       175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na  224 (243)
T d1wzca1         175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (243)
T ss_dssp             ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence            34567999888888776422346899999999999999999999999865

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.79  E-value=1.2e-05  Score=69.81  Aligned_cols=56  Identities=18%  Similarity=0.293  Sum_probs=46.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcCC-hhHHHHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG  280 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~~-~~L~~~~  280 (332)
                      ..+..|...++.+....+.. .++++++|||.||++|++.||+||++++. +.+++.|
T Consensus       203 ~~~~~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a  259 (283)
T d2b30a1         203 KLGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHA  259 (283)
T ss_dssp             ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHS
T ss_pred             CCcchhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhC
Confidence            34567999999999888764 47899999999999999999999999754 5666665

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.69  E-value=7.9e-05  Score=61.97  Aligned_cols=41  Identities=17%  Similarity=0.245  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~~  271 (332)
                      .......+.+.+.. +.++++|||+.+|+.+++.||+ .|.+.
T Consensus       162 p~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~  203 (225)
T d2g80a1         162 TQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLAS  203 (225)
T ss_dssp             HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred             hhHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEe
Confidence            45666777777774 5899999999999999999998 55555

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=0.00054  Score=57.87  Aligned_cols=92  Identities=16%  Similarity=0.217  Sum_probs=57.5

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHH-hcCCCcceEEeeeeEEcCceecccccccCCCCcchHHH
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFS-SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA  232 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~-~~g~~~~~I~aN~l~~~~g~~tG~~~~~~~~~~~K~~~  232 (332)
                      .-||+.+|++.++++|   ++++.||+-.  ..+....-|. .+|++...  -+.+.+.++         -..-..|...
T Consensus        87 p~pga~~fl~~~~~~G---v~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~--~~~vll~~~---------~~~K~~rr~~  152 (209)
T d2b82a1          87 PKEVARQLIDMHVRRG---DAIFFVTGRSPTKTETVSKTLADNFHIPATN--MNPVIFAGD---------KPGQNTKSQW  152 (209)
T ss_dssp             ECHHHHHHHHHHHHHT---CEEEEEECSCCCSSCCHHHHHHHHTTCCTTT--BCCCEECCC---------CTTCCCSHHH
T ss_pred             cchhHHHHHHHHHHcC---CeEEEEeCCchhhHHHHHHHHHHHcCCCccc--ccceEeeCC---------CCCchHHHHH
Confidence            4589999999999999   9999999731  1233334443 36764211  111111111         0112246655


Q ss_pred             HHHHHHHhCCCCCceEEEEeCCccchHHhhhcCe-eEEE
Q 020024          233 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI  270 (332)
Q Consensus       233 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-gvv~  270 (332)
                      +++    +     .-++++||..+|+..+..|++ +|-+
T Consensus       153 Ik~----y-----~I~l~~GD~l~Df~aA~eagi~~iRi  182 (209)
T d2b82a1         153 LQD----K-----NIRIFYGDSDNDITAARDVGARGIRI  182 (209)
T ss_dssp             HHH----T-----TEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             HHH----c-----CeEEEecCCHHHHhHHHHcCCCceEe
Confidence            543    2     358899999999999999996 5554

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.0012  Score=55.23  Aligned_cols=24  Identities=8%  Similarity=0.109  Sum_probs=21.3

Q ss_pred             CChhHHHHHHHHHHcCCCCCcEEEEcc
Q 020024          156 LQDGCTTFFQKVVKNENLNANVHVLSY  182 (332)
Q Consensus       156 lrpg~~e~l~~l~~~g~~~~~~~IvS~  182 (332)
                      +.|++.+.|+.+.++|   +.++|||-
T Consensus        51 l~~~v~~~i~~L~~~g---y~iiIvTN   74 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEG---YKLVIFTN   74 (195)
T ss_dssp             SCTTHHHHHHHHHHHT---CEEEEEEE
T ss_pred             ccCCHHHHHHHHHhCC---cEEEEecC
Confidence            5788889999999999   99999994

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00017  Score=60.25  Aligned_cols=55  Identities=11%  Similarity=0.126  Sum_probs=42.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCc----cchHHhhhcC-eeEEEcCChhHHHHhHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV----GDLLCLLEAD-IGIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~----~Dl~~l~~Ad-~gvv~~~~~~L~~~~~~  282 (332)
                      ..+.+|...|+.++. .   ..++++++||+.    ||++|++.|+ .|+++++.....+.|.+
T Consensus       181 ~~~vsKg~al~~L~~-~---~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~  240 (244)
T d2fuea1         181 PEGWDKRYCLDSLDQ-D---SFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCRE  240 (244)
T ss_dssp             ETTCSTTHHHHHHTT-S---CCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHH
T ss_pred             chhccHHHHHHHHhc-C---ChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHH
Confidence            345679999987764 2   347999999976    9999999997 69999987655555543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.99  E-value=0.00018  Score=59.88  Aligned_cols=43  Identities=16%  Similarity=0.179  Sum_probs=35.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeCCccchHHhhhcCeeEEEcC
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS  272 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gvv~~~  272 (332)
                      ..+.+|...++.+..+      ..++++|||.||+.|++.++.|+.++.
T Consensus       155 p~g~~Kg~al~~l~~~------~~~i~~GDs~ND~~Mf~~~~~~~av~~  197 (229)
T d1u02a_         155 VPGVNKGSAIRSVRGE------RPAIIAGDDATDEAAFEANDDALTIKV  197 (229)
T ss_dssp             CTTCCHHHHHHHHHTT------SCEEEEESSHHHHHHHHTTTTSEEEEE
T ss_pred             cCCCCHHHHHHHHhcc------ccceeecCCCChHHHHhccCCeEEEEe
Confidence            4466899999988742      579999999999999999977766653

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00028  Score=58.96  Aligned_cols=55  Identities=15%  Similarity=0.202  Sum_probs=40.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCceEEEEeC----CccchHHhhhcC-eeEEEcCChhHHHHhHh
Q 020024          224 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEAD-IGIVIGSSSSLRRVGSQ  282 (332)
Q Consensus       224 ~~~~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad-~gvv~~~~~~L~~~~~~  282 (332)
                      ..+.+|...++.++.   . ..++++++||    |.||++|++.|+ .|+.+++....+++|++
T Consensus       181 ~~~vsKg~al~~l~~---~-~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~~~~~  240 (243)
T d2amya1         181 PDGWDKRYCLRHVEN---D-GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL  240 (243)
T ss_dssp             ETTCSGGGGGGGTTT---S-CCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHhC---C-CcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHHHHHH
Confidence            345568878876653   2 3479999999    679999999998 58888887777777765

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.025  Score=47.86  Aligned_cols=35  Identities=6%  Similarity=-0.091  Sum_probs=26.7

Q ss_pred             HHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 020024          161 TTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN  199 (332)
Q Consensus       161 ~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~  199 (332)
                      .+.|++++++|   ++++|+|+. +..-+...++.+++.
T Consensus        27 ~~al~~L~~~g---i~v~i~TGR-~~~~~~~~~~~l~l~   61 (271)
T d1rkqa_          27 KNAIAAARARG---VNVVLTTGR-PYAGVHNYLKELHME   61 (271)
T ss_dssp             HHHHHHHHHTT---CEEEEECSS-CGGGTHHHHHHTTCC
T ss_pred             HHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHhcCc
Confidence            34577788888   999999986 467777888877653

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.23  Score=39.87  Aligned_cols=30  Identities=13%  Similarity=0.136  Sum_probs=23.6

Q ss_pred             hcCCCChhHHHHHHHHHHcCCCCCcEEEEccc
Q 020024          152 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYC  183 (332)
Q Consensus       152 ~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g  183 (332)
                      +.++..||+.++++.|.+.+  ...++|+|+.
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~--~~~v~i~t~~  100 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQ--NTDVFICTSP  100 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHST--TEEEEEEECC
T ss_pred             hhCCcccCHHHHHHHHhhcc--CccceEEccc
Confidence            35788999999999999865  1467888874

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=93.19  E-value=0.037  Score=46.75  Aligned_cols=31  Identities=10%  Similarity=0.054  Sum_probs=21.5

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA  196 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~  196 (332)
                      +.|+.++++|   +.++|+|+- +..-+...++.+
T Consensus        35 ~al~~l~~~G---i~v~i~TGR-~~~~~~~~~~~l   65 (283)
T d2b30a1          35 DAIKEAIEKG---YMVSICTGR-SKVGILSAFGEE   65 (283)
T ss_dssp             HHHHHHHHHT---CEEEEECSS-CHHHHHHHHCHH
T ss_pred             HHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHh
Confidence            4455667778   999999986 456666666543

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=92.82  E-value=0.05  Score=45.81  Aligned_cols=42  Identities=17%  Similarity=-0.027  Sum_probs=25.2

Q ss_pred             HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeee
Q 020024          162 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE  207 (332)
Q Consensus       162 e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~  207 (332)
                      +.|+.++++|   +.++++|+- +...+...++.+++..-.|.+|-
T Consensus        27 ~~l~~l~~~g---i~~~i~TGR-~~~~~~~~~~~l~~~~~~i~~nG   68 (269)
T d1rlma_          27 AQYQELKKRG---IKFVVASGN-QYYQLISFFPELKDEISFVAENG   68 (269)
T ss_dssp             HHHHHHHHHT---CEEEEECSS-CHHHHGGGCTTTTTTSEEEEGGG
T ss_pred             HHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHhCcccceEeece
Confidence            3456667778   899888875 35555556665554322344444

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.92  E-value=0.19  Score=40.88  Aligned_cols=41  Identities=5%  Similarity=-0.117  Sum_probs=28.1

Q ss_pred             HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeee
Q 020024          163 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE  207 (332)
Q Consensus       163 ~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~  207 (332)
                      .|+.++++|   +.++++|+- +..-+..+++.++++...|.+|-
T Consensus        25 ai~~l~~~G---~~~~~aTGR-~~~~~~~~~~~~~~~~~~i~~nG   65 (243)
T d1wzca1          25 IIEELKDMG---FEIIFNSSK-TRAEQEYYRKELEVETPFISENG   65 (243)
T ss_dssp             HHHHHHHTT---EEEEEECSS-CHHHHHHHHHHHTCCSCEEETTT
T ss_pred             HHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHhcccccccccCC
Confidence            355567778   899999986 47777788887776533444444

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.03  E-value=0.063  Score=43.73  Aligned_cols=19  Identities=11%  Similarity=0.191  Sum_probs=15.1

Q ss_pred             ccCC-EEEEeCCHHHHHHhH
Q 020024          311 EKSG-ILYTVSSWAEVHAFI  329 (332)
Q Consensus       311 ~~~~-~ly~~~~W~~i~~~l  329 (332)
                      +..| ..|.|++|+++.+++
T Consensus       219 ~~~g~~~~~v~~~~~~~~~~  238 (243)
T d2amya1         219 TDPRTMGYSVTAPEDTRRIC  238 (243)
T ss_dssp             HCTTEEEEECSSHHHHHHHH
T ss_pred             HccCCcEEEeCCHHHHHHHH
Confidence            4555 689999999998765

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=89.61  E-value=0.058  Score=44.80  Aligned_cols=18  Identities=28%  Similarity=0.327  Sum_probs=14.9

Q ss_pred             CceEEEEeCCCCcccccc
Q 020024           30 DRLIIFSDFDLTCTIVDS   47 (332)
Q Consensus        30 ~~~lvi~DFD~TiT~~Dt   47 (332)
                      ++.+++||+||||+..+.
T Consensus         2 ~~~li~~DlDGTL~~~~~   19 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQ   19 (244)
T ss_dssp             CSEEEEECTBTTTBSCHH
T ss_pred             CceEEEEECcccCCCCCC
Confidence            567999999999997653

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.30  E-value=0.07  Score=43.31  Aligned_cols=16  Identities=31%  Similarity=0.277  Sum_probs=13.3

Q ss_pred             ceEEEEeCCCCccccc
Q 020024           31 RLIIFSDFDLTCTIVD   46 (332)
Q Consensus        31 ~~lvi~DFD~TiT~~D   46 (332)
                      |++++||+||||+..+
T Consensus         1 k~i~lFDlDGTLl~~~   16 (244)
T d2fuea1           1 RVLCLFDVDGTLTPAR   16 (244)
T ss_dssp             CEEEEEESBTTTBSTT
T ss_pred             CEEEEEccccCccCCC
Confidence            5688899999999754

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=89.13  E-value=0.22  Score=41.57  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~  271 (332)
                      ...++..+++.+. ..+++++||||. +|+.++..||+ .|.+.
T Consensus       179 p~~~~~a~~~lgi-~p~e~v~IGD~~~~DI~~a~~aG~~tilV~  221 (250)
T d2c4na1         179 PWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVL  221 (250)
T ss_dssp             THHHHHHHHHHTC-CGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred             hhhHhhhhhhhcC-CchheEEecCChHHHHHHHHHCCCCEEEEC
Confidence            4677777777777 357999999996 69999999998 45554

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=88.53  E-value=0.29  Score=40.82  Aligned_cols=41  Identities=20%  Similarity=0.485  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEc
Q 020024          230 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG  271 (332)
Q Consensus       230 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~  271 (332)
                      ...++..+++.+.+ ..++++||||. +|+.++..||+ .|.+.
T Consensus       183 p~~~~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~  225 (253)
T d1wvia_         183 AVIMNKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVT  225 (253)
T ss_dssp             HHHHHHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred             cccceehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence            56777777777774 58999999996 59999999998 56664

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.28  E-value=0.18  Score=40.59  Aligned_cols=39  Identities=5%  Similarity=0.005  Sum_probs=35.2

Q ss_pred             CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC
Q 020024          154 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG  197 (332)
Q Consensus       154 i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g  197 (332)
                      +.+|||+.+|++++.+.    .+++|.|+| +.++.+.++....
T Consensus        54 v~~RP~l~eFL~~l~~~----yei~I~Ta~-~~~YA~~il~~ld   92 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL----FECVLFTAS-LAKYADPVADLLD   92 (181)
T ss_dssp             EEECTTHHHHHHHHHHH----SEEEEECSS-CHHHHHHHHHHHC
T ss_pred             EecCCCHHHHHHHHHhc----eEEEEEcCC-cHHHHHHHHHHhc
Confidence            67999999999999976    899999999 5999999998764

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.18  E-value=0.26  Score=41.03  Aligned_cols=42  Identities=17%  Similarity=0.407  Sum_probs=32.7

Q ss_pred             hHHHHHHHHHHhCCCCCceEEEEeCCc-cchHHhhhcCe-eEEEc
Q 020024          229 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG  271 (332)
Q Consensus       229 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-gvv~~  271 (332)
                      +...++..+...+.. ..++++|||+. +|+.++..||+ .|.+.
T Consensus       182 ~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~  225 (253)
T d1yv9a1         182 KAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVT  225 (253)
T ss_dssp             SHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred             chhHHHHHHHHhCCC-ccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence            345667777777774 57999999995 69999999998 55554

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=84.39  E-value=0.43  Score=39.71  Aligned_cols=42  Identities=24%  Similarity=0.293  Sum_probs=32.2

Q ss_pred             HHHHHHHHHhCCCCCceEEEEeCC-ccchHHhhhcCe-eEEEcCC
Q 020024          231 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS  273 (332)
Q Consensus       231 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-gvv~~~~  273 (332)
                      ..+...+.+.+.. ..++++|||+ .+|+.++..||+ .|.+..+
T Consensus       189 ~~~~~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G  232 (261)
T d1vjra_         189 LVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTG  232 (261)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSS
T ss_pred             HHHHHHHhhhccC-chhcceecCChhHHHHHHHHCCCcEEEECCC
Confidence            5566666677763 5899999999 579999999998 5666533

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=83.25  E-value=0.2  Score=40.26  Aligned_cols=53  Identities=11%  Similarity=0.173  Sum_probs=27.0

Q ss_pred             hhHHHHhHhcCCeeeecCchhhhhhhhhhcCCCCCccc----cCCEEEEeCCHHHHHHhH
Q 020024          274 SSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKE----KSGILYTVSSWAEVHAFI  329 (332)
Q Consensus       274 ~~L~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~ly~~~~W~~i~~~l  329 (332)
                      ..|+.++.+.  .++-| .+-..++..|......-...    ++-.=|.+.+++|+..||
T Consensus       162 ~al~~l~~~~--~~i~~-GDs~ND~~Mf~~~~~~~av~~g~~~~~A~~~~~~~~ev~~~l  218 (229)
T d1u02a_         162 SAIRSVRGER--PAIIA-GDDATDEAAFEANDDALTIKVGEGETHAKFHVADYIEMRKIL  218 (229)
T ss_dssp             HHHHHHHTTS--CEEEE-ESSHHHHHHHHTTTTSEEEEESSSCCCCSEEESSHHHHHHHH
T ss_pred             HHHHHHhccc--cceee-cCCCChHHHHhccCCeEEEEeCCCCccCeEEcCCHHHHHHHH
Confidence            4677777653  33332 34444554443322111111    222346779999988877

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=82.38  E-value=8.1  Score=31.42  Aligned_cols=140  Identities=10%  Similarity=0.049  Sum_probs=76.6

Q ss_pred             CCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeeeEEcCceeccccc-
Q 020024          142 INLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-  220 (332)
Q Consensus       142 ~~~~~l~~~~~~i~lrpg~~e~l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g~~~~~I~aN~l~~~~g~~tG~~~-  220 (332)
                      ++.+++..+.+++.|..=-.+--+++++     ..+.|+-+|--+..+...|...|+..+.++=.+..-..+ +.-.+. 
T Consensus         3 l~~~e~~ry~Rqi~l~~~g~~~Q~kL~~-----~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sN-L~RQ~l~   76 (247)
T d1jw9b_           3 LSDQEMLRYNRQIILRGFDFDGQEALKD-----SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSN-LQRQTLH   76 (247)
T ss_dssp             CCHHHHHHTHHHHTSTTTHHHHHHHHHH-----CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGG-GGTCTTC
T ss_pred             CCHHHHHHhhceeccccCCHHHHHHHhC-----CCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcccchhh-hhhhccc
Confidence            4555555554444443211233334554     577777654336777777777898655554222111111 111111 


Q ss_pred             ccCCCCcchHHHHHHHHHHhCCCCCceEEEEeC---CccchHHhhhcCeeEEEcCC----hhHHHHhHhcCCeeee
Q 020024          221 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD---SVGDLLCLLEADIGIVIGSS----SSLRRVGSQFGVTFIP  289 (332)
Q Consensus       221 ~~~~~~~~K~~~l~~~~~~~~~~~~~~viyiGD---s~~Dl~~l~~Ad~gvv~~~~----~~L~~~~~~~~~~~~p  289 (332)
                      ..-.-|.-|..++++.+.+.+.  .-++..+-.   +.++...+...|+-+...++    ..+-++|.++++|++.
T Consensus        77 ~~~diG~~K~~~a~~~l~~~np--~~~i~~~~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~i~  150 (247)
T d1jw9b_          77 SDATVGQPKVESARDALTRINP--HIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVS  150 (247)
T ss_dssp             CGGGTTSBHHHHHHHHHHHHCT--TSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             cHhhcCchHHHHHHHHHHHhhc--ccchhhhhhhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCCccc
Confidence            2223466799999998887765  345666654   34455555567743332222    2677889999998884