Citrus Sinensis ID: 020057

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
Protein Sequence
MNFTTTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQINGNDVADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccEEEEEcEEEccccEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEcccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccEEccccccEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEEEEEEEEcEcccccccccccccccEEccEEEEcEEEEEEEEEcccccccccccccHHHcccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEEccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccccEEEEc
Coil and Loop (DISEMBL)
mnftttfrgnlsllphcssccdirfqpilaslhvtrpvrcrlgnfssykvSRFCRKKRELICRVtdtqtepdsnndkekevhdgqenqpatasdqeddksqpdsqldsqpqvenqingndvadtkggvqddgngevasgsplpgvkpqqldeyiripkETIDILkdqvfgfdtffvtnqepyeggvlfkgnlrgqAAKTYEKISTRMKNKFGDQYKLFLLvnpeddkpvavvvprktlqpettavpewfaaGAFGLVTVFTLLLRNVPALQSNLlstfdnlnlltnglpGALVTALVIGVHELGHILAAKStgvelgvpyfvpsWQALLVL
Flexible Loop (DISEMBL)
mnftttfrgnlsllPHCSSCCDIRFQPILASLHVTRPVrcrlgnfssykvsrfcrkkrelicrvtdtqtepdsnndkekevhdgqenqpatasdqeddksQPDSQLDSQPQVENQINGNDVADTKGGVQDDGNGevasgsplpgvkpqqLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPyeggvlfkgnlrgQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Low Complexity Region (SEG)
MNFTTTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEddksqpdsqldsqpqVENQINGNDVADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Disordered region (IsUnstruct)
****TTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVT************************************************************************************LDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLV*
Disordered Region (DISOPRED)
****TTFRGNLSLLPHCSSCCDIRFQPILASL**********************************************************************************************************************************ILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKT******AVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Disordered Region (DISEMBL)
MNFTTTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVTDT********************************************VENQINGNDVADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Disordered Region (DISPRO)
*********NLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVTDTQ****************************************************************************VKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNFTTTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQINGNDVADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
359486422	543	PREDICTED: uncharacterized protein LOC10	0.966	0.589	0.671	1e-127
255571887	525	metalloendopeptidase, putative [Ricinus	0.957	0.603	0.683	1e-119
334187443	524	ethylene-dependent gravitropism-deficien	0.951	0.601	0.606	1e-107
42573279	527	ethylene-dependent gravitropism-deficien	0.951	0.597	0.610	1e-107
449441596	456	PREDICTED: uncharacterized protein LOC10	0.885	0.642	0.666	1e-107
449525585	364	PREDICTED: uncharacterized protein LOC10	0.885	0.804	0.666	1e-106
356501144	523	PREDICTED: uncharacterized protein LOC10	0.924	0.585	0.644	1e-104
297810677	558	peptidase M50 family protein [Arabidopsi	0.951	0.564	0.558	1e-103
15239226	556	ethylene-dependent gravitropism-deficien	0.951	0.566	0.561	1e-102
356551482	520	PREDICTED: uncharacterized protein LOC10	0.918	0.584	0.630	1e-102

>gi|359486422|ref|XP_002271131.2| PREDICTED: uncharacterized protein LOC100267324 [Vitis vinifera] gi|297736633|emb|CBI25504.3| unnamed protein product [Vitis vinifera]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/344 (67%), Positives = 270/344 (78%), Gaps = 24/344 (6%)

Query: 1   MNFTTTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKR-E 59
           MNF  TFRGN +   HCSSCCD+RFQP L+S  V R  RCR+ N   ++VSR   ++R  
Sbjct: 1   MNFPATFRGNFNPFSHCSSCCDLRFQPFLSSPIVWRQKRCRISNLQVHQVSRLGSRRRPR 60

Query: 60  LICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQ---- 115
           ++C VT+T+TEP++NND+EK  H+     P+      D   Q D QLDSQP V +Q    
Sbjct: 61  IVCGVTETETEPENNNDEEK-AHENGGMPPSI-----DSTVQNDPQLDSQPLVADQDKDQ 114

Query: 116 ------INGNDVADT-------KGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETID 162
                 +NG+++ ++       +G VQD  N EVASGSPLPGVKPQ LDE IRIPKETID
Sbjct: 115 FVHNAMLNGDNMVNSDNQETEAQGNVQDSENLEVASGSPLPGVKPQVLDESIRIPKETID 174

Query: 163 ILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVN 222
           ILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRG+AAK+YEKI+ RM+++FGD+YKLFLL+N
Sbjct: 175 ILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGKAAKSYEKITIRMQDRFGDKYKLFLLIN 234

Query: 223 PEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLN 282
           PEDDKPVAVVVPR TLQPETTAVPEWFAAGAFGLVTVFTL LRNVPALQSNLLS FDNLN
Sbjct: 235 PEDDKPVAVVVPRNTLQPETTAVPEWFAAGAFGLVTVFTLFLRNVPALQSNLLSVFDNLN 294

Query: 283 LLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQ 326
           LL +GLPGALVTALV+G HE+ HIL A+STG++LGVPYFVPSWQ
Sbjct: 295 LLMDGLPGALVTALVLGTHEISHILVARSTGIKLGVPYFVPSWQ 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571887|ref|XP_002526886.1| metalloendopeptidase, putative [Ricinus communis] gi|223533785|gb|EEF35517.1| metalloendopeptidase, putative [Ricinus communis]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/329 (68%), Positives = 259/329 (78%), Gaps = 12/329 (3%)

Query: 1   MNFTTTFRGNLS--LLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKR 58
           M+    FRGN +  LLP  S C          S+   R +RCRL +F  Y VSRF  +KR
Sbjct: 1   MSLIAAFRGNFTPLLLPLSSHCSSCTSS---VSVTSQRKLRCRLRDFKLYHVSRFV-EKR 56

Query: 59  ELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQING 118
            ++CRVT+T+TEPD NNDKEKEVH+G E  P T S       Q  S+ DSQP+V NQI+ 
Sbjct: 57  VIVCRVTETETEPDGNNDKEKEVHEGGETPPTTGS-----AGQVSSESDSQPRVVNQISN 111

Query: 119 NDV-ADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVT 177
           ND   +++   QD     VASGSPLPGVK QQLDE  RIPK TIDILKDQVFGFDTFFVT
Sbjct: 112 NDEQTNSESSTQDADAENVASGSPLPGVKTQQLDESFRIPKGTIDILKDQVFGFDTFFVT 171

Query: 178 NQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKT 237
           +QEPYEGGVLFKGNLRG+AAK+YEK++ RM+NKFGD+Y+LFLLVNPEDD+PVAVVVPRKT
Sbjct: 172 SQEPYEGGVLFKGNLRGKAAKSYEKLTNRMQNKFGDEYRLFLLVNPEDDRPVAVVVPRKT 231

Query: 238 LQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALV 297
           LQPETTAVPEWFAAGAFGLVT+FTLLLRNVPALQSNLLSTFDNL LL +GL GAL+TAL+
Sbjct: 232 LQPETTAVPEWFAAGAFGLVTIFTLLLRNVPALQSNLLSTFDNLELLKDGLSGALITALI 291

Query: 298 IGVHELGHILAAKSTGVELGVPYFVPSWQ 326
           +GVHE+GHIL AKS+ V+LGVPYFVPSWQ
Sbjct: 292 LGVHEVGHILVAKSSDVKLGVPYFVPSWQ 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187443|ref|NP_001190232.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] gi|332003536|gb|AED90919.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/328 (60%), Positives = 244/328 (74%), Gaps = 13/328 (3%)

Query: 1   MNFT-TTFRGNLSLLPHCSSCCDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRE 59
           MN    +FRGN  +L  CSSCC ++FQP +A+   T  +       S  K      +KRE
Sbjct: 1   MNLAVASFRGNFGVLSQCSSCCSLQFQPFVAA---TSSLNFGQTGTSRRKKDLKLERKRE 57

Query: 60  LICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQINGN 119
            + RVT+TQTEP+ N+D        ++N+    S  +D  ++  ++L+SQ  V N+  GN
Sbjct: 58  TLVRVTETQTEPEGNDD--------EDNKEGKESSADDPPTKIPTELNSQSTVVNEAPGN 109

Query: 120 DVADTKGGVQDDGNG-EVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTN 178
           +  +       DG+  EV+SGSPLPGV P QLD+ +R+PKETIDIL+ QVFGFDTFFVT+
Sbjct: 110 EEENKAQFSSQDGDKLEVSSGSPLPGVNPLQLDDSMRLPKETIDILRGQVFGFDTFFVTS 169

Query: 179 QEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTL 238
           QEPYEGGVLFKGNLRG+ A +YEKI TRM+N FGDQYKLFLL NPEDDKPVAVVVPR++L
Sbjct: 170 QEPYEGGVLFKGNLRGKPATSYEKIKTRMENNFGDQYKLFLLTNPEDDKPVAVVVPRRSL 229

Query: 239 QPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVI 298
           +PETTAVPEWFAAG+FGLV +FTL LRNVPALQS+LLS FDNL LL +GLPGALVTALV+
Sbjct: 230 EPETTAVPEWFAAGSFGLVALFTLFLRNVPALQSDLLSAFDNLELLKDGLPGALVTALVL 289

Query: 299 GVHELGHILAAKSTGVELGVPYFVPSWQ 326
           GVHELGHIL A S G++LGVP+FVPSWQ
Sbjct: 290 GVHELGHILVANSLGIKLGVPFFVPSWQ 317

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42573279|ref|NP_974736.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] gi|332003534|gb|AED90917.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/331 (61%), Positives = 247/331 (74%), Gaps = 16/331 (4%)

Query: 1   MNFTT-TFRGNLSLLPHCSSCCDIRFQPILA---SLHVTRPVRCRLGNFSSYKVSRFCRK 56
           MN    +FRGN  +L  CSSCC ++FQP +A   SL+  +    R       K+ R  RK
Sbjct: 1   MNLAVASFRGNFGVLSQCSSCCSLQFQPFVAATSSLNFGQTGTSR--RKKDLKLERVFRK 58

Query: 57  KRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQI 116
            RE + RVT+TQTEP+ N+D        ++N+    S  +D  ++  ++L+SQ  V N+ 
Sbjct: 59  -RETLVRVTETQTEPEGNDD--------EDNKEGKESSADDPPTKIPTELNSQSTVVNEA 109

Query: 117 NGNDVADTKGGVQDDGNG-EVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFF 175
            GN+  +       DG+  EV+SGSPLPGV P QLD+ +R+PKETIDIL+ QVFGFDTFF
Sbjct: 110 PGNEEENKAQFSSQDGDKLEVSSGSPLPGVNPLQLDDSMRLPKETIDILRGQVFGFDTFF 169

Query: 176 VTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPR 235
           VT+QEPYEGGVLFKGNLRG+ A +YEKI TRM+N FGDQYKLFLL NPEDDKPVAVVVPR
Sbjct: 170 VTSQEPYEGGVLFKGNLRGKPATSYEKIKTRMENNFGDQYKLFLLTNPEDDKPVAVVVPR 229

Query: 236 KTLQPETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTA 295
           ++L+PETTAVPEWFAAG+FGLV +FTL LRNVPALQS+LLS FDNL LL +GLPGALVTA
Sbjct: 230 RSLEPETTAVPEWFAAGSFGLVALFTLFLRNVPALQSDLLSAFDNLELLKDGLPGALVTA 289

Query: 296 LVIGVHELGHILAAKSTGVELGVPYFVPSWQ 326
           LV+GVHELGHIL A S G++LGVP+FVPSWQ
Sbjct: 290 LVLGVHELGHILVANSLGIKLGVPFFVPSWQ 320

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441596|ref|XP_004138568.1| PREDICTED: uncharacterized protein LOC101217814 [Cucumis sativus]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/306 (66%), Positives = 238/306 (77%), Gaps = 13/306 (4%)

Query: 23  IRFQPILASLHVTR-PVRCRLGNFSSYKVSRFCRKKRELICRVTDTQTEPDSNNDKEKEV 81
           +RF P  A     R   R R  +    +VS   R KR + C+VT+TQTEPD NNDKE++ 
Sbjct: 1   MRFNPCFAPFTNFRDQQRIRHSSLKLCQVS--SRGKRGIACKVTETQTEPDGNNDKEEDD 58

Query: 82  HDGQENQPATASDQEDDKSQPDSQ-LDSQPQVENQINGNDVADTKGGVQDDGNGEVASGS 140
             G + QP+ +    +DK Q DSQ +D    VEN+         +G +QD  N EVASGS
Sbjct: 59  SKGGD-QPSFSDSAAEDKFQLDSQAVDEVNIVENK--------DQGDIQDIDNVEVASGS 109

Query: 141 PLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTY 200
           PLPG+KPQQLDE  RIP+ET++ILK+QVFGFDTFFVT+Q+PYEGGVLFKGNLRG+AAK+Y
Sbjct: 110 PLPGLKPQQLDESFRIPRETVEILKNQVFGFDTFFVTSQDPYEGGVLFKGNLRGEAAKSY 169

Query: 201 EKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVF 260
           EKI+ RM++ FGD YKLFLL+NPEDDKPVAVVVPRKTLQPETTAVPEWFAA AFGLVTVF
Sbjct: 170 EKITRRMQDTFGDVYKLFLLINPEDDKPVAVVVPRKTLQPETTAVPEWFAAAAFGLVTVF 229

Query: 261 TLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPY 320
           TLLLRNVPALQSNLLSTFDNL LL +GLPGA VTALV+GVHELGHIL A+  GV+ G+PY
Sbjct: 230 TLLLRNVPALQSNLLSTFDNLELLKDGLPGAFVTALVLGVHELGHILVARDAGVKFGIPY 289

Query: 321 FVPSWQ 326
           FVPSWQ
Sbjct: 290 FVPSWQ 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525585|ref|XP_004169797.1| PREDICTED: uncharacterized protein LOC101225644, partial [Cucumis sativus]

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/306 (66%), Positives = 238/306 (77%), Gaps = 13/306 (4%)

Query: 23  IRFQPILASLHVTR-PVRCRLGNFSSYKVSRFCRKKRELICRVTDTQTEPDSNNDKEKEV 81
           +RF P  A     R   R R  +    +VS   R KR + C+VT+TQTEPD NNDKE++ 
Sbjct: 1   MRFNPCFAPFTNFRDQQRIRHSSLKLCQVS--SRGKRGIACKVTETQTEPDGNNDKEEDD 58

Query: 82  HDGQENQPATASDQEDDKSQPDSQ-LDSQPQVENQINGNDVADTKGGVQDDGNGEVASGS 140
             G + QP+ +    +DK Q DSQ +D    VEN+         +G +QD  N EVASGS
Sbjct: 59  SKGGD-QPSFSDSAAEDKFQLDSQAVDEVNIVENK--------DQGDIQDIDNVEVASGS 109

Query: 141 PLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTY 200
           PLPG+KPQQLDE  RIP+ET++ILK+QVFGFDTFFVT+Q+PYEGGVLFKGNLRG+AAK+Y
Sbjct: 110 PLPGLKPQQLDESFRIPRETVEILKNQVFGFDTFFVTSQDPYEGGVLFKGNLRGEAAKSY 169

Query: 201 EKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVF 260
           EKI+ RM++ FGD YKLFLL+NPEDDKPVAVVVPRKTLQPETTAVPEWFAA AFGLVTVF
Sbjct: 170 EKITRRMQDTFGDVYKLFLLINPEDDKPVAVVVPRKTLQPETTAVPEWFAAAAFGLVTVF 229

Query: 261 TLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPY 320
           TLLLRNVPALQSNLLSTFDNL LL +GLPGA VTALV+GVHELGHIL A+  GV+ G+PY
Sbjct: 230 TLLLRNVPALQSNLLSTFDNLELLKDGLPGAFVTALVLGVHELGHILVARDVGVKFGIPY 289

Query: 321 FVPSWQ 326
           FVPSWQ
Sbjct: 290 FVPSWQ 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501144|ref|XP_003519388.1| PREDICTED: uncharacterized protein LOC100778800 [Glycine max]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/326 (64%), Positives = 246/326 (75%), Gaps = 20/326 (6%)

Query: 5   TTFRGNLSL-LPHCSSC--CDIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELI 61
           + FRGNL + L  C+SC   D+RFQ      H     RCR   F   +  R  R+ R + 
Sbjct: 9   SAFRGNLLVPLSRCTSCFKLDLRFQHSDGFRHS----RCRRSLFKLIRDPRSSRR-RGIA 63

Query: 62  CRVTDTQTEPDSNND-KEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQINGND 120
           C VT    EPD+ +D KEKE     E      S ++      D++  ++   EN+   +D
Sbjct: 64  CSVT----EPDNGSDEKEKEADKNGETLRVEDSSEQSIPPPVDAEQLNEFSDENK-GQSD 118

Query: 121 VADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQE 180
           V +      DD N EVASGSPLPGVKPQ+LDE I+IPKETI+ILK+QVFGFDTFFVT+Q+
Sbjct: 119 VQN-----MDDSN-EVASGSPLPGVKPQKLDEAIKIPKETIEILKNQVFGFDTFFVTSQD 172

Query: 181 PYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQP 240
           PYEGGVLFKGNLRGQAAK+Y+KIS R+K+KFGD+YKLFLLVNPEDDKPVAVVVPR TLQP
Sbjct: 173 PYEGGVLFKGNLRGQAAKSYDKISKRLKDKFGDEYKLFLLVNPEDDKPVAVVVPRTTLQP 232

Query: 241 ETTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGV 300
           ETTAVPEWFAAG+FGL+TVFTLLLRNVPALQS+LLSTFDNLNLL +GLPGALVTAL++GV
Sbjct: 233 ETTAVPEWFAAGSFGLITVFTLLLRNVPALQSDLLSTFDNLNLLKDGLPGALVTALILGV 292

Query: 301 HELGHILAAKSTGVELGVPYFVPSWQ 326
           HELGH LAAK TGV+LGVPYFVPSWQ
Sbjct: 293 HELGHFLAAKDTGVKLGVPYFVPSWQ 318

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810677|ref|XP_002873222.1| peptidase M50 family protein [Arabidopsis lyrata subsp. lyrata] gi|297319059|gb|EFH49481.1| peptidase M50 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/362 (55%), Positives = 250/362 (69%), Gaps = 47/362 (12%)

Query: 1   MNFT-TTFRGNLSLLPHCSSCCDIRFQPILAS-----LHVTRPVRCRLGNFSSYKVSRFC 54
           MN    +FRGN  +L  CSS C ++FQP +A+        TR  R +     + K+ R  
Sbjct: 1   MNLAVASFRGNFGVLSQCSSYCSLQFQPFVAATSSLNFGQTRTSRRK----KNLKLERVF 56

Query: 55  RKKRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVEN 114
           RK RE + RVT+TQTEP+ NND++    +G+E      +  +D  +Q  ++L+SQ  + N
Sbjct: 57  RK-RETLVRVTETQTEPEGNNDEDNNGEEGKE------TSADDPPTQIPTELNSQSTIVN 109

Query: 115 QINGNDVADTKGGVQDDGNG-EVASGSPLPGV---------------------------- 145
           +  GN+  +       DG+  EV+SGSPLPGV                            
Sbjct: 110 EAPGNEEENKAQLSSQDGDKLEVSSGSPLPGVNVSITNNVKYKGDSLMLSIYLSFIKSCC 169

Query: 146 -KPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKIS 204
            +P QLD+ +R+PKETIDIL+ QVFGFDTFFVT+QEPYEGGVLFKGNLRG+ AK+YEKI 
Sbjct: 170 EQPLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFKGNLRGEPAKSYEKIK 229

Query: 205 TRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLL 264
           TRM+N FGDQYKLFLL NPEDDKPVAVVVPR++L+PETTAVPEWFAAG+FGLV +FTL L
Sbjct: 230 TRMENNFGDQYKLFLLSNPEDDKPVAVVVPRRSLEPETTAVPEWFAAGSFGLVALFTLFL 289

Query: 265 RNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPS 324
           RNVPALQS+LLS FDNL LL +GLPGALVT LV+GVHELGHIL A S G++LGVP+FVPS
Sbjct: 290 RNVPALQSDLLSAFDNLELLKDGLPGALVTTLVLGVHELGHILVANSLGIKLGVPFFVPS 349

Query: 325 WQ 326
           WQ
Sbjct: 350 WQ 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239226|ref|NP_196193.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] gi|9759099|dbj|BAB09668.1| unnamed protein product [Arabidopsis thaliana] gi|332003535|gb|AED90918.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/360 (56%), Positives = 248/360 (68%), Gaps = 45/360 (12%)

Query: 1   MNFTT-TFRGNLSLLPHCSSCCDIRFQPILA---SLHVTRPVRCRLGNFSSYKVSRFCRK 56
           MN    +FRGN  +L  CSSCC ++FQP +A   SL+  +    R       K+ R  RK
Sbjct: 1   MNLAVASFRGNFGVLSQCSSCCSLQFQPFVAATSSLNFGQTGTSR--RKKDLKLERVFRK 58

Query: 57  KRELICRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQI 116
            RE + RVT+TQTEP+ N+D        ++N+    S  +D  ++  ++L+SQ  V N+ 
Sbjct: 59  -RETLVRVTETQTEPEGNDD--------EDNKEGKESSADDPPTKIPTELNSQSTVVNEA 109

Query: 117 NGNDVADTKGGVQDDGNG-EVASGSPLPGV-----------------------------K 146
            GN+  +       DG+  EV+SGSPLPGV                             +
Sbjct: 110 PGNEEENKAQFSSQDGDKLEVSSGSPLPGVNVSIIIHVIYKDDSIMFSGCLSFIKSCCEQ 169

Query: 147 PQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTR 206
           P QLD+ +R+PKETIDIL+ QVFGFDTFFVT+QEPYEGGVLFKGNLRG+ A +YEKI TR
Sbjct: 170 PLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFKGNLRGKPATSYEKIKTR 229

Query: 207 MKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLRN 266
           M+N FGDQYKLFLL NPEDDKPVAVVVPR++L+PETTAVPEWFAAG+FGLV +FTL LRN
Sbjct: 230 MENNFGDQYKLFLLTNPEDDKPVAVVVPRRSLEPETTAVPEWFAAGSFGLVALFTLFLRN 289

Query: 267 VPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQ 326
           VPALQS+LLS FDNL LL +GLPGALVTALV+GVHELGHIL A S G++LGVP+FVPSWQ
Sbjct: 290 VPALQSDLLSAFDNLELLKDGLPGALVTALVLGVHELGHILVANSLGIKLGVPFFVPSWQ 349

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551482|ref|XP_003544103.1| PREDICTED: uncharacterized protein LOC100816506 [Glycine max]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/325 (63%), Positives = 249/325 (76%), Gaps = 21/325 (6%)

Query: 5   TTFRGNLSL-LPHCSSCC--DIRFQPILASLHVTRPVRCRLGNFSSYKVSRFCRKKRELI 61
           ++FRGNL + L  C+SC   D+R Q      H+ RP       +SS+K+ R  R+ R + 
Sbjct: 9   SSFRGNLLVPLSRCTSCLELDLRIQHSEGFRHL-RP------RWSSFKLIRNPRR-RVIA 60

Query: 62  CRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEDDKSQPDSQLDSQPQVENQINGNDV 121
           C VT+     + +++KEKE     E  P   S ++      D++  ++   EN+   +DV
Sbjct: 61  CSVTEPH---NGSDEKEKEADKNGETLPLEDSSEQSIPPPVDAEQINEFSDENK-GQSDV 116

Query: 122 ADTKGGVQDDGNGEVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEP 181
            +      DD N EVASGSPLPGVKPQ+LDE I+IPKETI+ILK+QVFGFDTFFVT+Q+P
Sbjct: 117 QN-----MDDSN-EVASGSPLPGVKPQKLDEAIKIPKETIEILKNQVFGFDTFFVTSQDP 170

Query: 182 YEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPE 241
           YEGGVLFKGNLRGQAAK+Y+KIS R+K+KFGD+YKLFLLVNPED+ PVAVVVPR TLQPE
Sbjct: 171 YEGGVLFKGNLRGQAAKSYDKISKRLKDKFGDEYKLFLLVNPEDNMPVAVVVPRTTLQPE 230

Query: 242 TTAVPEWFAAGAFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVH 301
           TTAVPEWFAAG+FGLVTVFTLLLRNVP+LQS+LLSTFDNLNLL +GLPGALVTAL++GVH
Sbjct: 231 TTAVPEWFAAGSFGLVTVFTLLLRNVPSLQSDLLSTFDNLNLLKDGLPGALVTALILGVH 290

Query: 302 ELGHILAAKSTGVELGVPYFVPSWQ 326
           ELGH LAAK TGV+LGVPYFVPSWQ
Sbjct: 291 ELGHFLAAKDTGVKLGVPYFVPSWQ 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	331
TAIR|locus:2166389	556	EGY2 "ethylene-dependent gravi	0.546	0.325	0.801	8.8e-96
TAIR|locus:2182372	548	EGY1 "ETHYLENE-DEPENDENT GRAVI	0.471	0.284	0.228	4.7e-12
TAIR|locus:2030938	573	EGY3 "ETHYLENE-DEPENDENT GRAVI	0.498	0.287	0.291	5.9e-10

TAIR|locus:2166389 EGY2 "ethylene-dependent gravitropism-deficient and yellow-green-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
 Identities = 145/181 (80%), Positives = 165/181 (91%)

Query:   146 KPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKIST 205
             +P QLD+ +R+PKETIDIL+ QVFGFDTFFVT+QEPYEGGVLFKGNLRG+ A +YEKI T
Sbjct:   169 QPLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFKGNLRGKPATSYEKIKT 228

Query:   206 RMKNKFGDQYKLFLLVNPEDDKPVAVVVPRKTLQPETTAVPEWFAAGAFGLVTVFTLLLR 265
             RM+N FGDQYKLFLL NPEDDKPVAVVVPR++L+PETTAVPEWFAAG+FGLV +FTL LR
Sbjct:   229 RMENNFGDQYKLFLLTNPEDDKPVAVVVPRRSLEPETTAVPEWFAAGSFGLVALFTLFLR 288

Query:   266 NVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSW 325
             NVPALQS+LLS FDNL LL +GLPGALVTALV+GVHELGHIL A S G++LGVP+FVPSW
Sbjct:   289 NVPALQSDLLSAFDNLELLKDGLPGALVTALVLGVHELGHILVANSLGIKLGVPFFVPSW 348

Query:   326 Q 326
             Q
Sbjct:   349 Q 349

GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS

GO:0006508 "proteolysis" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

TAIR|locus:2182372 EGY1 "ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 39/171 (22%), Positives = 77/171 (45%)

Query:    62 CRVTDTQTEPDSNNDKEKEVHDGQENQPATASDQEXXXXXXXXXXXXXXXVENQINGNDV 121
             C   D  +  D +  +  E H     + AT  +++                 N+  G+D 
Sbjct:    55 CLGNDENSNRDDSIGENGETHKSSVVKTATFEEEDEETSKSSSTTSSS----NEF-GSDK 109

Query:   122 ADTKGGVQDDGNG-EVASGSPLPGVKPQQLDEYIRIPKETIDILKDQVFGFDTFFVTNQE 180
                   +    +  ++ S   +  + P+++D     P + + ++KD++FG+ TF+VT +E
Sbjct:   110 TSMPSTIDPTYSSFQIDSFKLMELLGPEKVD-----PAD-VKLIKDKLFGYSTFWVTKEE 163

Query:   181 PYEG---GVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKLFLLVNPEDDKP 228
             P+     G+LF GNLRG+    + K+  ++     D+Y LF++  P  + P
Sbjct:   164 PFGDLGEGILFLGNLRGKKEDVFAKLQRKLVEVASDKYNLFMIEEPNSEGP 214

GO:0004222 "metalloendopeptidase activity" evidence=IEA;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009630 "gravitropism" evidence=IMP

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0010027 "thylakoid membrane organization" evidence=IMP

GO:0010207 "photosystem II assembly" evidence=IMP

GO:0048564 "photosystem I assembly" evidence=IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0043157 "response to cation stress" evidence=IMP

GO:0060359 "response to ammonium ion" evidence=IMP

TAIR|locus:2030938 EGY3 "ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
 Identities = 53/182 (29%), Positives = 88/182 (48%)

Query:   159 ETIDILK-DQVFGFDTFFVTNQEPYEGGVLFKGNLRGQAAKTYEKISTRMKNKFGDQYKL 217
             + +D+ K    FGFDTFF T+   +  G +F GNLR    +   K+  ++    G    +
Sbjct:   176 KALDLNKLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEVTPKLEAKLSEAAGRDVVV 235

Query:   218 FLLVNPEDD--KPVAVVVPRKT--LQPETTAVPE-WFAAGAFGL-VTVF-TLLLRNVPAL 270
             + +    ++  K V +V P+    LQ E+T +   W    A  L VT F T+ L +   L
Sbjct:   236 WFMEERSNEITKQVCMVQPKAEIDLQFESTRLSTPWGYVSAIALCVTTFGTIALMSGFFL 295

Query:   271 QSNLLSTFDNLNLLTNGLP--GALVTALVIGVHELGHILAAKSTGVELGVPYFVPS-WQA 327
             + +  +TFD+   + N +P  G  ++  ++GV E+   + A   GV+L   + VPS W  
Sbjct:   296 KPD--ATFDDY--IANVVPLFGGFLS--ILGVSEIATRVTAARHGVKLSPSFLVPSNWTG 349

Query:   328 LL 329
              L
Sbjct:   350 CL 351

GO:0005739 "mitochondrion" evidence=ISM

GO:0009408 "response to heat" evidence=IEP;RCA

GO:0009644 "response to high light intensity" evidence=IEP;RCA

GO:0042542 "response to hydrogen peroxide" evidence=IEP;RCA

GO:0006457 "protein folding" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00029258001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (543 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00007398001	SubName- Full=Putative uncharacterized protein (Chromosome chr16 scaffold_189, whole genome sho [...] (302 aa)				•			•		0.496
	GSVIVG00022834001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (353 aa)			•	•					0.479
	GSVIVG00017440001	SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (113 aa)			•	•					0.465
	GSVIVG00016388001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (214 aa)				•			•		0.465
	GSVIVG00002190001	SubName- Full=Chromosome undetermined scaffold_127, whole genome shotgun sequence; (437 aa)			•	•					0.463
	GSVIVG00023602001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (180 aa)			•	•					0.453
	GSVIVG00019306001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (234 aa)			•	•					0.448
	GSVIVG00024719001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (396 aa)				•			•		0.420
	GSVIVG00022091001	SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (845 aa)				•			•		0.418
	GSVIVG00037015001	SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (198 aa)				•			•		0.413

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	331
cd06160	183	cd06160, S2P-M50_like_2, Uncharacterized homologs	1e-08
cd06163	182	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 p	0.004

>gnl|CDD|100081 cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 253 AFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKST 312
              ++T+ T LL        +      N  LL  GLP AL    ++G+HE+GH LAA+  
Sbjct: 2   LLLVLTLLTTLL---VGAWLSGNDVPGNPLLLLQGLPFALALLAILGIHEMGHYLAARRH 58

Query: 313 GVELGVPYFVPSWQ 326
           GV+  +PYF+P   
Sbjct: 59  GVKASLPYFIPFPF 72

Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains. Length = 183

>gnl|CDD|100084 cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms

 Score = 37.4 bits (88), Expect = 0.004
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 288 LPGALVTALVIGVHELGHILAAKSTGV 314
           L   LV  ++I VHELGH L AK  GV
Sbjct: 2   LAFILVLGILIFVHELGHFLVAKLFGV 28

In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA. Length = 182

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	331
cd06160	183	S2P-M50_like_2 Uncharacterized homologs of Site-2	99.08
cd06164	227	S2P-M50_SpoIVFB_CBS SpoIVFB Site-2 protease (S2P),	97.69
cd06161	208	S2P-M50_SpoIVFB SpoIVFB Site-2 protease (S2P), a z	97.25
cd06159	263	S2P-M50_PDZ_Arch Uncharacterized Archaeal homologs	97.08
cd06162	277	S2P-M50_PDZ_SREBP Sterol regulatory element-bindin	95.27
KOG2921	484	consensus Intramembrane metalloprotease (sterol-re	90.57

>cd06160 S2P-M50_like_2 Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms

Probab=99.08  E-value=1.4e-10  Score=104.42  Aligned_cols=75  Identities=35%  Similarity=0.461  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHhhccccccccchhhccchhHhhhchhhHHHHHHHHHHHHHHHHHHHHHcCCccccceeccccccccc
Q 020057          253 AFGLVTVFTLLLRNVPALQSNLLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPSWQALLV  330 (331)
Q Consensus       253 LLfl~Tl~TTl~aGa~~L~~~~L~~f~~p~~l~~gLP~al~ll~ILgvHE~GHylaArr~gVklSlPyFIP~~QLGsv  330 (331)
                      +++++|++|....+......   .+.++++.+..+++++++++.++.+||+||+++||++|+|+..|+|+|++++|++
T Consensus         2 ~~~~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~l~~~l~iHElgH~~~A~~~G~~~~~~~l~P~~~~G~~   76 (183)
T cd06160           2 LLLVLTLLTTLLVGAWLSGN---DVPGNPLLLLQGLPFALALLAILGIHEMGHYLAARRHGVKASLPYFIPFPFIGTF   76 (183)
T ss_pred             HHHHHHHHHHHHHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccceeeeehHhcCcE
Confidence            45688998888877531111   2336788899999999999999999999999999999999999999998777754

Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.

>cd06164 S2P-M50_SpoIVFB_CBS SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation

Probab=97.69  E-value=9.5e-05  Score=68.62  Aligned_cols=46  Identities=26%  Similarity=0.249  Sum_probs=39.7

Q ss_pred             cchhHhhhchhhHHHHHHHHHHHHHHHHHHHHHcCCccccceeccc
Q 020057          279 DNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPS  324 (331)
Q Consensus       279 ~~p~~l~~gLP~al~ll~ILgvHE~GHylaArr~gVklSlPyFIP~  324 (331)
                      .++..+.-|+.++++++.++.+||+||+++||++|+|+.--.+.|+
T Consensus        37 ~~~~~~~~g~~~~~~l~~~v~iHElgH~~~A~~~G~~v~~i~l~p~   82 (227)
T cd06164          37 LGAVAWLLGLAAALLLFASVLLHELGHSLVARRYGIPVRSITLFLF   82 (227)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeECeEEEEee
Confidence            3455677899999999999999999999999999999987677764

In this subgroup, SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain. SpoIVFB is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB. It has been proposed tha

>cd06161 S2P-M50_SpoIVFB SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation

Probab=97.25  E-value=0.00031  Score=63.96  Aligned_cols=43  Identities=33%  Similarity=0.417  Sum_probs=37.0

Q ss_pred             hHhhhchhhHHHHHHHHHHHHHHHHHHHHHcCCccccceeccc
Q 020057          282 NLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVPS  324 (331)
Q Consensus       282 ~~l~~gLP~al~ll~ILgvHE~GHylaArr~gVklSlPyFIP~  324 (331)
                      ..+..++.+++.++.++.+||+||+++||++|+++.--.+.|+
T Consensus        25 ~~~~~~~~~~l~l~~~v~iHElgH~~~A~~~G~~v~~i~l~p~   67 (208)
T cd06161          25 VAWLLGLLEALLLFLSVLLHELGHALVARRYGIRVRSITLLPF   67 (208)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccceEEEee
Confidence            3566788999999999999999999999999999876666664

SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB.

>cd06159 S2P-M50_PDZ_Arch Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms

Probab=97.08  E-value=0.0014  Score=62.69  Aligned_cols=34  Identities=24%  Similarity=0.292  Sum_probs=28.0

Q ss_pred             hhchhhHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 020057          285 TNGLPGALVTALVIGVHELGHILAAKSTGVELGV  318 (331)
Q Consensus       285 ~~gLP~al~ll~ILgvHE~GHylaArr~gVklSl  318 (331)
                      ...+.+.++++..+.+||+||.++||++|+++..
T Consensus       108 i~~~~~~iaL~isv~iHElgHa~~Ar~~G~~V~~  141 (263)
T cd06159         108 IPLPYGIIALVVGVVVHELSHGILARVEGIKVKS  141 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECc
Confidence            3455566677778889999999999999999875

Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group appears to be limited to Archaeal S2P/M50s homologs with additional putative N-terminal transmembrane spanning regions, relative to the core protein, and either one or two PDZ domains present.

>cd06162 S2P-M50_PDZ_SREBP Sterol regulatory element-binding protein (SREBP) Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50A), regulates intramembrane proteolysis (RIP) of SREBP and is part of a signal transduction mechanism involved in sterol and lipid metabolism

Probab=95.27  E-value=0.018  Score=55.76  Aligned_cols=28  Identities=29%  Similarity=0.218  Sum_probs=23.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 020057          291 ALVTALVIGVHELGHILAAKSTGVELGV  318 (331)
Q Consensus       291 al~ll~ILgvHE~GHylaArr~gVklSl  318 (331)
                      .++++....+||+||.++|+++|+++.-
T Consensus       131 l~al~isvvvHElgHal~A~~~gi~V~~  158 (277)
T cd06162         131 FTALLISGVVHEMGHGVAAVREQVRVNG  158 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCeece
Confidence            3455566778999999999999999875

In sterol-depleted mammalian cells, a two-step proteolytic process releases the N-terminal domains of SREBPs from membranes of the endoplasmic reticulum (ER). These domains translocate into the nucleus, where they activate genes of cholesterol and fatty acid biosynthesis. The first cleavage occurs at Site-1 within the ER lumen to generate an intermediate that is subsequently released from the membrane by cleavage at Site-2, which lies within the first transmembrane domain. It is the second proteolytic step that is carried out by the SREBP Site-2 protease (S2P) which is present in this CD family. This group appears to be limited to eumetazoan proteins and contains one PDZ domain.

>KOG2921 consensus Intramembrane metalloprotease (sterol-regulatory element-binding protein (SREBP) protease) [Posttranslational modification, protein turnover, chaperones]

Probab=90.57  E-value=0.21  Score=51.29  Aligned_cols=41  Identities=37%  Similarity=0.592  Sum_probs=29.1

Q ss_pred             hhchhhHHHHHHH-HHHHHHHHHHHHHHcCCccc-cceecccc
Q 020057          285 TNGLPGALVTALV-IGVHELGHILAAKSTGVELG-VPYFVPSW  325 (331)
Q Consensus       285 ~~gLP~al~ll~I-LgvHE~GHylaArr~gVklS-lPyFIP~~  325 (331)
                      +++++|-+..+.| +-+|||||-|||.+.||++. .=.||=++
T Consensus       120 l~~I~yf~t~lvi~~vvHElGHalAA~segV~vngfgIfi~ai  162 (484)
T KOG2921|consen  120 LSGIAYFLTSLVITVVVHELGHALAAASEGVQVNGFGIFIAAI  162 (484)
T ss_pred             cccchhhhhhHHHHHHHHHhhHHHHHHhcCceeeeeEEEEEEE
Confidence            5677776655544 44799999999999999975 33344333

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	331
3b4r_A	224	Putative zinc metalloprotease MJ0392; intramembran	5e-04

>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii} Length = 224

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 274 LLSTFDNLNLLTNGLPGALVTALVIGVHELGHILAAKSTGVELGVPYFVP 323
           ++     +N         ++  + + +HELGH   AK  GV++     +P
Sbjct: 27  VIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSYVAKKYGVKIEKILLLP 76

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	331
3b4r_A	224	Putative zinc metalloprotease MJ0392; intramembran	97.36

>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}

Probab=97.36  E-value=9.4e-05  Score=67.12  Aligned_cols=36  Identities=28%  Similarity=0.387  Sum_probs=33.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCCccccceeccc
Q 020057          289 PGALVTALVIGVHELGHILAAKSTGVELGVPYFVPS  324 (331)
Q Consensus       289 P~al~ll~ILgvHE~GHylaArr~gVklSlPyFIP~  324 (331)
                      .++++++.++.+||+||+++||++|+++.-..++|+
T Consensus        42 ~~~l~l~~~v~~HElgH~~~A~~~G~~~~~i~l~p~   77 (224)
T 3b4r_A           42 VLFILLFVSVVLHELGHSYVAKKYGVKIEKILLLPI   77 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCccccEEEEEe
Confidence            778888888999999999999999999999999885

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00