Citrus Sinensis ID: 020061


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccc
cccccccccccccccccHHcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccEEccc
maggaapkadeplphpakdqlpsisycitspppwpeaILLGFQHYIVMLGTTvliptslvpqmgggneEKAKVIQTLLFVAGLNTLLQSLfgtrlpavmggsytfvpSTISIILAgrfsnysgdpvEKFKRTMRAIQGSLIVASTLQIVLGFSGLWrnvtrflsplsvvplislvgfglyefgfpgvakcveigLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVggayndaapktqascrtdraglidaapwirvpwpfqwgapsfdAGEAFAMMMASFVALVESTGAFFAVARyasatpmppsvlsrgvgwqvi
maggaapkadeplphpaKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYAsatpmppsvlsrgvgwqvi
MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFlsplsvvplislvGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
***********************ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASA*****************
***************************ITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
***********PLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
********************LPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
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MAGGAAPKADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query331 2.2.26 [Sep-21-2011]
Q27GI3 532 Nucleobase-ascorbate tran no no 0.990 0.616 0.839 1e-164
Q8RWE9 528 Nucleobase-ascorbate tran no no 0.978 0.613 0.788 1e-144
Q0WPE9 538 Nucleobase-ascorbate tran no no 0.969 0.596 0.751 1e-143
Q8VZQ5 539 Nucleobase-ascorbate tran no no 0.972 0.597 0.666 1e-128
O04472 541 Putative nucleobase-ascor no no 0.966 0.591 0.554 1e-109
Q41760 527 Nucleobase-ascorbate tran N/A no 0.969 0.609 0.559 1e-107
Q94C70 524 Nucleobase-ascorbate tran no no 0.966 0.610 0.579 1e-105
P93039 526 Nucleobase-ascorbate tran no no 0.981 0.617 0.582 1e-105
Q9SHZ3 520 Nucleobase-ascorbate tran no no 0.960 0.611 0.540 1e-95
Q8GZD4 551 Nucleobase-ascorbate tran no no 0.951 0.571 0.5 5e-83
>sp|Q27GI3|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2 Back     alignment and function desciption
 Score =  576 bits (1484), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/331 (83%), Positives = 310/331 (93%), Gaps = 3/331 (0%)

Query: 1   MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
           MAGG AP  KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct: 1   MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60

Query: 59  LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
           LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct: 61  LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120

Query: 119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFG 178
           S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RFLSP+S VPL+ LVGFG
Sbjct: 121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179

Query: 179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
           LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct: 180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239

Query: 239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
           TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct: 240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299

Query: 299 VESTGAFFAVARYASATPMPPSVLSRGVGWQ 329
           VESTGAF AV+RYASAT +PPS+LSRG+GWQ
Sbjct: 300 VESTGAFVAVSRYASATMLPPSILSRGIGWQ 330





Arabidopsis thaliana (taxid: 3702)
>sp|Q8RWE9|NAT5_ARATH Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1 Back     alignment and function description
>sp|Q0WPE9|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZQ5|NAT8_ARATH Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1 Back     alignment and function description
>sp|O04472|NAT10_ARATH Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2 Back     alignment and function description
>sp|Q41760|LPE1_MAIZE Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2 Back     alignment and function description
>sp|Q94C70|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2 Back     alignment and function description
>sp|P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2 Back     alignment and function description
>sp|Q9SHZ3|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1 Back     alignment and function description
>sp|Q8GZD4|NAT3_ARATH Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
255540763 531 purine permease, putative [Ricinus commu 0.969 0.604 0.872 1e-163
224135763 528 nucleobase ascorbate transporter [Populu 0.990 0.621 0.858 1e-163
224121656 529 nucleobase ascorbate transporter [Populu 0.987 0.618 0.860 1e-163
356516694 531 PREDICTED: nucleobase-ascorbate transpor 0.990 0.617 0.842 1e-162
356508649 531 PREDICTED: nucleobase-ascorbate transpor 0.990 0.617 0.842 1e-162
145334873 476 nucleobase-ascorbate transporter 6 [Arab 0.990 0.689 0.839 1e-162
15241994 532 nucleobase-ascorbate transporter 6 [Arab 0.990 0.616 0.839 1e-162
297793879 532 hypothetical protein ARALYDRAFT_496474 [ 0.990 0.616 0.836 1e-161
449440700 530 PREDICTED: nucleobase-ascorbate transpor 0.990 0.618 0.832 1e-160
225457114 531 PREDICTED: nucleobase-ascorbate transpor 0.975 0.608 0.842 1e-160
>gi|255540763|ref|XP_002511446.1| purine permease, putative [Ricinus communis] gi|223550561|gb|EEF52048.1| purine permease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/322 (87%), Positives = 308/322 (95%), Gaps = 1/322 (0%)

Query: 8   KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGN 67
           K +EP PHP K+QLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+LVPQMGGGN
Sbjct: 9   KPEEPQPHPPKEQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGN 68

Query: 68  EEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVE 127
           +EKA+VIQTLLFVAGLNTLLQSLFGTRLPAV+GGSYTFVP+TISIILAGRFS+ + DP E
Sbjct: 69  KEKAQVIQTLLFVAGLNTLLQSLFGTRLPAVIGGSYTFVPTTISIILAGRFSD-ATDPEE 127

Query: 128 KFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV 187
           +FK  MRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLS VPL++LVGFGLYE GFPGV
Sbjct: 128 RFKSIMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVALVGFGLYELGFPGV 187

Query: 188 AKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDA 247
           AKCVEIGLP+L+I+VF+SQY+PHVIK  +++FDRFAVIFS+VIVWIYAHLLTVGGAYNDA
Sbjct: 188 AKCVEIGLPELIILVFVSQYMPHVIKSRRHVFDRFAVIFSIVIVWIYAHLLTVGGAYNDA 247

Query: 248 APKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFA 307
           APKTQ +CRTDRAGLIDAAPWIRVP+PFQWGAPSFDAGEAFAMMMASFVALVESTGAF A
Sbjct: 248 APKTQNTCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESTGAFIA 307

Query: 308 VARYASATPMPPSVLSRGVGWQ 329
           V+RYASATPMPPSVLSRG+GWQ
Sbjct: 308 VSRYASATPMPPSVLSRGIGWQ 329




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135763|ref|XP_002322154.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222869150|gb|EEF06281.1| nucleobase ascorbate transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224121656|ref|XP_002318639.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222859312|gb|EEE96859.1| nucleobase ascorbate transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356516694|ref|XP_003527028.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 1 [Glycine max] gi|356516696|ref|XP_003527029.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356508649|ref|XP_003523067.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max] Back     alignment and taxonomy information
>gi|145334873|ref|NP_001078782.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|222422853|dbj|BAH19413.1| AT5G62890 [Arabidopsis thaliana] gi|332010288|gb|AED97671.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15241994|ref|NP_201094.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|79600443|ref|NP_851251.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|145323680|ref|NP_001032127.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|122064607|sp|Q27GI3.2|NAT6_ARATH RecName: Full=Nucleobase-ascorbate transporter 6; Short=AtNAT6 gi|21326025|gb|AAM47573.1|AF466198_1 putative permease 1 [Arabidopsis thaliana] gi|10177467|dbj|BAB10858.1| permease 1 [Arabidopsis thaliana] gi|332010285|gb|AED97668.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010286|gb|AED97669.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010287|gb|AED97670.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297793879|ref|XP_002864824.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] gi|297310659|gb|EFH41083.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449440700|ref|XP_004138122.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] gi|449477394|ref|XP_004155010.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225457114|ref|XP_002283469.1| PREDICTED: nucleobase-ascorbate transporter 6 [Vitis vinifera] gi|297733828|emb|CBI15075.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
TAIR|locus:2170783 532 AT5G62890 [Arabidopsis thalian 0.990 0.616 0.812 1.7e-146
TAIR|locus:2158829 528 AT5G49990 [Arabidopsis thalian 0.978 0.613 0.760 1.2e-134
TAIR|locus:2202700 538 NAT7 "nucleobase-ascorbate tra 0.984 0.605 0.720 4.6e-128
TAIR|locus:2194631 539 NAT8 "nucleobase-ascorbate tra 0.972 0.597 0.642 2.2e-114
TAIR|locus:2031085 526 AT1G49960 [Arabidopsis thalian 0.981 0.617 0.558 1.7e-100
TAIR|locus:2034104 541 AT1G65550 [Arabidopsis thalian 0.978 0.598 0.536 4.1e-97
TAIR|locus:2040874 524 AT2G34190 [Arabidopsis thalian 0.966 0.610 0.560 3e-94
TAIR|locus:2060076 520 AT2G05760 [Arabidopsis thalian 0.960 0.611 0.521 1.6e-86
TAIR|locus:2066190 551 PDE135 "pigment defective embr 0.951 0.571 0.477 4.8e-78
TAIR|locus:2145507419 AT5G25420 [Arabidopsis thalian 0.558 0.441 0.548 6e-72
TAIR|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
 Identities = 269/331 (81%), Positives = 299/331 (90%)

Query:     1 MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
             MAGG AP  KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct:     1 MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60

Query:    59 LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
             LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct:    61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120

Query:   119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFG 178
             S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RF             GFG
Sbjct:   121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179

Query:   179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
             LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct:   180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239

Query:   239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
             TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct:   240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299

Query:   299 VESTGAFFAVARYASATPMPPSVLSRGVGWQ 329
             VESTGAF AV+RYASAT +PPS+LSRG+GWQ
Sbjct:   300 VESTGAFVAVSRYASATMLPPSILSRGIGWQ 330




GO:0005215 "transporter activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006810 "transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA;ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194631 NAT8 "nucleobase-ascorbate transporter 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034104 AT1G65550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145507 AT5G25420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_Genewise1_v1.C_LG_XV1399
SubName- Full=Putative uncharacterized protein; (528 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.31020001
Predicted protein (123 aa)
       0.493

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
pfam00860 389 pfam00860, Xan_ur_permease, Permease family 5e-26
COG2233 451 COG2233, UraA, Xanthine/uracil permeases [Nucleoti 9e-26
TIGR03173 406 TIGR03173, pbuX, xanthine permease 5e-22
TIGR00801 412 TIGR00801, ncs2, uracil-xanthine permease 2e-15
PRK11412 433 PRK11412, PRK11412, putative uracil/xanthine trans 1e-05
>gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family Back     alignment and domain information
 Score =  106 bits (267), Expect = 5e-26
 Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 35/300 (11%)

Query: 35  PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL-FGT 93
            + +LLG QH + M   T+++P  +   +G G E+ A++I      +G+ TLLQ+L FG 
Sbjct: 1   GQLLLLGLQHLLAMFAATIVVPLLVGDALGLGAEDLAQLISATFLASGIGTLLQTLIFGI 60

Query: 94  RLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS 153
           RLP  +G S+ FV +   I + G                +  + G+++VA  L  ++ F+
Sbjct: 61  RLPIYLGSSFAFVTAL-MIAIGGADWGI----------ALAGLFGAVLVAGVLFTLISFT 109

Query: 154 GLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVF---ISQYLPH 210
           GL   + R   P+   P++ L+G  L      G      I     V ++    ++  +  
Sbjct: 110 GLRGRLARLFPPVVTGPVVLLIGLSLAPIAVKGAGGGWAIADGLTVGLLDLLGLAVVVLA 169

Query: 211 VI----KRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAA 266
           VI       K  F +  ++  ++  W+ A  + +                 + +  +  A
Sbjct: 170 VILLLSVFLKGFFRQGPILIGIIAGWLLALFMGI----------------VNFSPEVMDA 213

Query: 267 PWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV 326
           PW ++P PF +G P F+ G    ++  + VA+VESTG   AVA+ +     P   L RG+
Sbjct: 214 PWFQLPHPFPFGTPLFNPGLILTVLAVALVAIVESTGDIRAVAKVSGRDLKPKPDLRRGL 273


This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389

>gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|234136 TIGR03173, pbuX, xanthine permease Back     alignment and domain information
>gnl|CDD|233133 TIGR00801, ncs2, uracil-xanthine permease Back     alignment and domain information
>gnl|CDD|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 331
KOG1292 510 consensus Xanthine/uracil transporters [Nucleotide 100.0
COG2233 451 UraA Xanthine/uracil permeases [Nucleotide transpo 100.0
PRK11412 433 putative uracil/xanthine transporter; Provisional 100.0
TIGR03616 429 RutG pyrimidine utilization transport protein G. T 100.0
PRK10720 428 uracil transporter; Provisional 100.0
TIGR00801 415 ncs2 uracil-xanthine permease. NCS2 family appears 100.0
PF00860 389 Xan_ur_permease: Permease family; InterPro: IPR006 100.0
TIGR03173 406 pbuX xanthine permease. All the seed members of th 100.0
TIGR00843 395 benE benzoate transporter. The benzoate transporte 99.91
PF03594 378 BenE: Benzoate membrane transport protein; InterPr 99.86
COG3135 402 BenE Uncharacterized protein involved in benzoate 99.82
COG2252 436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.79
COG0659 554 SUL1 Sulfate permease and related transporters (MF 98.69
PRK11660 568 putative transporter; Provisional 98.3
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 98.06
KOG0236 665 consensus Sulfate/bicarbonate/oxalate exchanger SA 94.64
TIGR00834 900 ae anion exchange protein. They preferentially cat 93.36
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 91.46
TIGR00843395 benE benzoate transporter. The benzoate transporte 87.2
PF11840 492 DUF3360: Protein of unknown function (DUF3360); In 86.61
KOG1172 876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 84.99
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.6e-59  Score=455.84  Aligned_cols=308  Identities=57%  Similarity=1.060  Sum_probs=290.8

Q ss_pred             cccccCCCCChHHHHHHHHHHHHHHHhhhhhHHHHhhhccCCChHHH-HHHHHHHHHHHHHHHHHHHHhCCccceeeccc
Q 020061           24 ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK-AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGS  102 (331)
Q Consensus        24 ~~y~~~d~pp~~~~l~lglQh~l~~~~~~i~vP~ii~~a~gl~~~~~-~~li~a~l~~~Gi~TllQ~~~G~rlPi~~g~s  102 (331)
                      +.|++||.|||++.+++|+||++.|+++++++|.+++++++.+++|. +++||+++|++||.|++|+++|.|||++||+|
T Consensus         1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S   80 (510)
T KOG1292|consen    1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS   80 (510)
T ss_pred             CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence            46999999999999999999999999999999999999999999998 99999999999999999999999999999999


Q ss_pred             cchHHHHHHHHhhcccCCCCC---CChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHhHhhhcCcchHHHHHHHHhhhh
Q 020061          103 YTFVPSTISIILAGRFSNYSG---DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL  179 (331)
Q Consensus       103 f~~l~~~~ai~~~~~~~~~~~---~~~~~~~~~~~~~~Ga~ivaGlv~illg~tg~~~~l~~~fpP~V~G~vv~lIGlsl  179 (331)
                      |+|+++..++.+...+.|+..   .+++.|++.+|+++|++++++++++++|++|+++++.|++.|+++.|.++++|+++
T Consensus        81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l  160 (510)
T KOG1292|consen   81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL  160 (510)
T ss_pred             eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence            999999999998777888642   23457999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccchhhhhhHHHHHHHHHHHHHH--cccchh--ccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCccccccc
Q 020061          180 YEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVIK--RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASC  255 (331)
Q Consensus       180 ~~~~~~~~~~~~~l~~~~l~~iv~~~~~--~~~~~~--~~~~~~r~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~  255 (331)
                      ++.+++.++.||+++++.+++.+++++|  +++...  .++++++++++++++.+.|++|++++.+|++|+++.+++++|
T Consensus       161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~  240 (510)
T KOG1292|consen  161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC  240 (510)
T ss_pred             HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence            9999999999999999999999999999  533221  235789999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCccccccccccCCCcccHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCCCCccccCcccccccC
Q 020061          256 RTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI  331 (331)
Q Consensus       256 ~~d~~~~v~~a~w~~~P~~~~fg~P~f~~~~i~~~~~~~iv~~~esiG~~~a~~~~~~~~~~~~~~i~rgi~~dGl  331 (331)
                      |+|.+..++++||+.+|+|+|||.|.||.+..+.++...++.++|++|+|.+++|.++.++++++.+|||+..||+
T Consensus       241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGi  316 (510)
T KOG1292|consen  241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGI  316 (510)
T ss_pred             cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhH
Confidence            9999988899999999999999999999999999999999999999999999999999999999999999999985



>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
3qe7_A 429 Uracil permease; uracil transporter, URAA, transpo 3e-21
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429 Back     alignment and structure
 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 52/298 (17%), Positives = 96/298 (32%), Gaps = 79/298 (26%)

Query: 32  PPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL- 90
           PP  + I L  QH   M G TV     LVP +   N        T+L   G+ TLL    
Sbjct: 12  PPLLQTIPLSLQHLFAMFGATV-----LVPVLFHIN------PATVLLFNGIGTLLYLFI 60

Query: 91  FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVL 150
              ++PA +G S+ F+   + ++  G                     G  I+   L  ++
Sbjct: 61  CKGKIPAYLGSSFAFISPVLLLLPLG----------------YEVALGGFIMCGVLFCLV 104

Query: 151 GF---SGLWRNVTRFLSPLSVVPLISLVGFGL-----------YEFGFPGVAKCVEIGLP 196
            F         +     P ++  +++++G  L              G    +K + I + 
Sbjct: 105 SFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISIT 164

Query: 197 QLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCR 256
            L + V  S          +       ++  V++ +  +  +                  
Sbjct: 165 TLAVTVLGSVL-------FRGFLAIIPILIGVLVGYALSFAM------------------ 199

Query: 257 TDRAGLID-----AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVA 309
               G++D      A W  +P  +    P F+      ++ A+ V + E  G     A
Sbjct: 200 ----GIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTA 250


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
3qe7_A 429 Uracil permease; uracil transporter, URAA, transpo 100.0
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=3.4e-44  Score=355.53  Aligned_cols=256  Identities=20%  Similarity=0.348  Sum_probs=226.3

Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHhhhhhHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCccceeec
Q 020061           22 PSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF-GTRLPAVMG  100 (331)
Q Consensus        22 ~~~~y~~~d~pp~~~~l~lglQh~l~~~~~~i~vP~ii~~a~gl~~~~~~~li~a~l~~~Gi~TllQ~~~-G~rlPi~~g  100 (331)
                      .|+.|++|||||+++++.+|+||+++|+++++++|+++    |+|+       +++++++|++|++|+++ |+|+|+++|
T Consensus         2 ~~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G   70 (429)
T 3qe7_A            2 TRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLG   70 (429)
T ss_dssp             --CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEE
T ss_pred             CCcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEec
Confidence            35789999999999999999999999999999999998    7887       37999999999999986 899999999


Q ss_pred             cccchHHHHHHHHhhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh--hhH-HhHhhhcCcchHHHHHHHHhh
Q 020061          101 GSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GLW-RNVTRFLSPLSVVPLISLVGF  177 (331)
Q Consensus       101 ~sf~~l~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~Ga~ivaGlv~illg~t--g~~-~~l~~~fpP~V~G~vv~lIGl  177 (331)
                      +||+|++++.++.+                +++++++|+++++|+++++++++  ++. +|++|+|||+|+|+++++||+
T Consensus        71 ~sfafi~~~~~i~~----------------~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl  134 (429)
T 3qe7_A           71 SSFAFISPVLLLLP----------------LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGL  134 (429)
T ss_dssp             ECGGGHHHHHHHGG----------------GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHh----------------cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHH
Confidence            99999999877753                25899999999999999999986  433 699999999999999999999


Q ss_pred             hhhhhhhccch-----------hhhhhHHHHHHHHHHHHHHcccchhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 020061          178 GLYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYND  246 (331)
Q Consensus       178 sl~~~~~~~~~-----------~~~~l~~~~l~~iv~~~~~~~~~~~~~~~~~r~~aiLigi~vG~i~a~~~g~~g~~~~  246 (331)
                      ++++.++++.+           .++.+++++++++++++++.|       +++|++++|+|+++||++++.+|.      
T Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~k-------g~~~~~aiLigivvg~~~a~~~G~------  201 (429)
T 3qe7_A          135 ELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFR-------GFLAIIPILIGVLVGYALSFAMGI------  201 (429)
T ss_dssp             HHHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSS-------TTTTTHHHHHHHHHHHHHHHHHHH------
T ss_pred             HHHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhc-------ccchhhHHHHHHHHHHHHHHHhcC------
Confidence            99999887543           367888999999888888764       578999999999999999999987      


Q ss_pred             CCcccccccccccccccCCCCccccccccccCCCcccHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCCCCccccCccc
Q 020061          247 AAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV  326 (331)
Q Consensus       247 ~~~~~~~~~~~d~~~~v~~a~w~~~P~~~~fg~P~f~~~~i~~~~~~~iv~~~esiG~~~a~~~~~~~~~~~~~~i~rgi  326 (331)
                                .|++. +.+++|+++|+   |+.|+||++.+..++++++++++|++|++.++++..+++..+++++||++
T Consensus       202 ----------~d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l  267 (429)
T 3qe7_A          202 ----------VDTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSM  267 (429)
T ss_dssp             ----------TTSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHH
T ss_pred             ----------CCccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHH
Confidence                      46664 67789999996   46799999999999999999999999999999999984444678999999


Q ss_pred             ccccC
Q 020061          327 GWQVI  331 (331)
Q Consensus       327 ~~dGl  331 (331)
                      .+||+
T Consensus       268 ~adGl  272 (429)
T 3qe7_A          268 FANGL  272 (429)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99984




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00