Citrus Sinensis ID: 020061
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 331 | ||||||
| 255540763 | 531 | purine permease, putative [Ricinus commu | 0.969 | 0.604 | 0.872 | 1e-163 | |
| 224135763 | 528 | nucleobase ascorbate transporter [Populu | 0.990 | 0.621 | 0.858 | 1e-163 | |
| 224121656 | 529 | nucleobase ascorbate transporter [Populu | 0.987 | 0.618 | 0.860 | 1e-163 | |
| 356516694 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.990 | 0.617 | 0.842 | 1e-162 | |
| 356508649 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.990 | 0.617 | 0.842 | 1e-162 | |
| 145334873 | 476 | nucleobase-ascorbate transporter 6 [Arab | 0.990 | 0.689 | 0.839 | 1e-162 | |
| 15241994 | 532 | nucleobase-ascorbate transporter 6 [Arab | 0.990 | 0.616 | 0.839 | 1e-162 | |
| 297793879 | 532 | hypothetical protein ARALYDRAFT_496474 [ | 0.990 | 0.616 | 0.836 | 1e-161 | |
| 449440700 | 530 | PREDICTED: nucleobase-ascorbate transpor | 0.990 | 0.618 | 0.832 | 1e-160 | |
| 225457114 | 531 | PREDICTED: nucleobase-ascorbate transpor | 0.975 | 0.608 | 0.842 | 1e-160 |
| >gi|255540763|ref|XP_002511446.1| purine permease, putative [Ricinus communis] gi|223550561|gb|EEF52048.1| purine permease, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/322 (87%), Positives = 308/322 (95%), Gaps = 1/322 (0%)
Query: 8 KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGN 67
K +EP PHP K+QLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+LVPQMGGGN
Sbjct: 9 KPEEPQPHPPKEQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGN 68
Query: 68 EEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVE 127
+EKA+VIQTLLFVAGLNTLLQSLFGTRLPAV+GGSYTFVP+TISIILAGRFS+ + DP E
Sbjct: 69 KEKAQVIQTLLFVAGLNTLLQSLFGTRLPAVIGGSYTFVPTTISIILAGRFSD-ATDPEE 127
Query: 128 KFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV 187
+FK MRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLS VPL++LVGFGLYE GFPGV
Sbjct: 128 RFKSIMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVALVGFGLYELGFPGV 187
Query: 188 AKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDA 247
AKCVEIGLP+L+I+VF+SQY+PHVIK +++FDRFAVIFS+VIVWIYAHLLTVGGAYNDA
Sbjct: 188 AKCVEIGLPELIILVFVSQYMPHVIKSRRHVFDRFAVIFSIVIVWIYAHLLTVGGAYNDA 247
Query: 248 APKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFA 307
APKTQ +CRTDRAGLIDAAPWIRVP+PFQWGAPSFDAGEAFAMMMASFVALVESTGAF A
Sbjct: 248 APKTQNTCRTDRAGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESTGAFIA 307
Query: 308 VARYASATPMPPSVLSRGVGWQ 329
V+RYASATPMPPSVLSRG+GWQ
Sbjct: 308 VSRYASATPMPPSVLSRGIGWQ 329
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135763|ref|XP_002322154.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222869150|gb|EEF06281.1| nucleobase ascorbate transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224121656|ref|XP_002318639.1| nucleobase ascorbate transporter [Populus trichocarpa] gi|222859312|gb|EEE96859.1| nucleobase ascorbate transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356516694|ref|XP_003527028.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 1 [Glycine max] gi|356516696|ref|XP_003527029.1| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356508649|ref|XP_003523067.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|145334873|ref|NP_001078782.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|222422853|dbj|BAH19413.1| AT5G62890 [Arabidopsis thaliana] gi|332010288|gb|AED97671.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|15241994|ref|NP_201094.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|79600443|ref|NP_851251.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|145323680|ref|NP_001032127.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|122064607|sp|Q27GI3.2|NAT6_ARATH RecName: Full=Nucleobase-ascorbate transporter 6; Short=AtNAT6 gi|21326025|gb|AAM47573.1|AF466198_1 putative permease 1 [Arabidopsis thaliana] gi|10177467|dbj|BAB10858.1| permease 1 [Arabidopsis thaliana] gi|332010285|gb|AED97668.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010286|gb|AED97669.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010287|gb|AED97670.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297793879|ref|XP_002864824.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] gi|297310659|gb|EFH41083.1| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|449440700|ref|XP_004138122.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] gi|449477394|ref|XP_004155010.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225457114|ref|XP_002283469.1| PREDICTED: nucleobase-ascorbate transporter 6 [Vitis vinifera] gi|297733828|emb|CBI15075.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 331 | ||||||
| TAIR|locus:2170783 | 532 | AT5G62890 [Arabidopsis thalian | 0.990 | 0.616 | 0.812 | 1.7e-146 | |
| TAIR|locus:2158829 | 528 | AT5G49990 [Arabidopsis thalian | 0.978 | 0.613 | 0.760 | 1.2e-134 | |
| TAIR|locus:2202700 | 538 | NAT7 "nucleobase-ascorbate tra | 0.984 | 0.605 | 0.720 | 4.6e-128 | |
| TAIR|locus:2194631 | 539 | NAT8 "nucleobase-ascorbate tra | 0.972 | 0.597 | 0.642 | 2.2e-114 | |
| TAIR|locus:2031085 | 526 | AT1G49960 [Arabidopsis thalian | 0.981 | 0.617 | 0.558 | 1.7e-100 | |
| TAIR|locus:2034104 | 541 | AT1G65550 [Arabidopsis thalian | 0.978 | 0.598 | 0.536 | 4.1e-97 | |
| TAIR|locus:2040874 | 524 | AT2G34190 [Arabidopsis thalian | 0.966 | 0.610 | 0.560 | 3e-94 | |
| TAIR|locus:2060076 | 520 | AT2G05760 [Arabidopsis thalian | 0.960 | 0.611 | 0.521 | 1.6e-86 | |
| TAIR|locus:2066190 | 551 | PDE135 "pigment defective embr | 0.951 | 0.571 | 0.477 | 4.8e-78 | |
| TAIR|locus:2145507 | 419 | AT5G25420 [Arabidopsis thalian | 0.558 | 0.441 | 0.548 | 6e-72 |
| TAIR|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 269/331 (81%), Positives = 299/331 (90%)
Query: 1 MAGGAAP--KADEPLPHPAKDQLPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTS 58
MAGG AP KADEP PHP KDQLP+ISYCITSPPPWPEAILLGFQHY+VMLGTTVLIPT+
Sbjct: 1 MAGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTA 60
Query: 59 LVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGSYTFVPSTISIILAGRF 118
LVPQMGGG EEKAKVIQT+LFVAG+NTLLQ+LFGTRLPAV+G SYTFVP+TISIIL+GRF
Sbjct: 61 LVPQMGGGYEEKAKVIQTILFVAGINTLLQTLFGTRLPAVVGASYTFVPTTISIILSGRF 120
Query: 119 SNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFG 178
S+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RF GFG
Sbjct: 121 SDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFG 179
Query: 179 LYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLL 238
LYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLL
Sbjct: 180 LYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLL 239
Query: 239 TVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 298
TVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL
Sbjct: 240 TVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVAL 299
Query: 299 VESTGAFFAVARYASATPMPPSVLSRGVGWQ 329
VESTGAF AV+RYASAT +PPS+LSRG+GWQ
Sbjct: 300 VESTGAFVAVSRYASATMLPPSILSRGIGWQ 330
|
|
| TAIR|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2194631 NAT8 "nucleobase-ascorbate transporter 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2034104 AT1G65550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2145507 AT5G25420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_Genewise1_v1.C_LG_XV1399 | SubName- Full=Putative uncharacterized protein; (528 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| eugene3.31020001 | • | 0.493 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 331 | |||
| pfam00860 | 389 | pfam00860, Xan_ur_permease, Permease family | 5e-26 | |
| COG2233 | 451 | COG2233, UraA, Xanthine/uracil permeases [Nucleoti | 9e-26 | |
| TIGR03173 | 406 | TIGR03173, pbuX, xanthine permease | 5e-22 | |
| TIGR00801 | 412 | TIGR00801, ncs2, uracil-xanthine permease | 2e-15 | |
| PRK11412 | 433 | PRK11412, PRK11412, putative uracil/xanthine trans | 1e-05 |
| >gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 5e-26
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 35/300 (11%)
Query: 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL-FGT 93
+ +LLG QH + M T+++P + +G G E+ A++I +G+ TLLQ+L FG
Sbjct: 1 GQLLLLGLQHLLAMFAATIVVPLLVGDALGLGAEDLAQLISATFLASGIGTLLQTLIFGI 60
Query: 94 RLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS 153
RLP +G S+ FV + I + G + + G+++VA L ++ F+
Sbjct: 61 RLPIYLGSSFAFVTAL-MIAIGGADWGI----------ALAGLFGAVLVAGVLFTLISFT 109
Query: 154 GLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVF---ISQYLPH 210
GL + R P+ P++ L+G L G I V ++ ++ +
Sbjct: 110 GLRGRLARLFPPVVTGPVVLLIGLSLAPIAVKGAGGGWAIADGLTVGLLDLLGLAVVVLA 169
Query: 211 VI----KRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAA 266
VI K F + ++ ++ W+ A + + + + + A
Sbjct: 170 VILLLSVFLKGFFRQGPILIGIIAGWLLALFMGI----------------VNFSPEVMDA 213
Query: 267 PWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV 326
PW ++P PF +G P F+ G ++ + VA+VESTG AVA+ + P L RG+
Sbjct: 214 PWFQLPHPFPFGTPLFNPGLILTVLAVALVAIVESTGDIRAVAKVSGRDLKPKPDLRRGL 273
|
This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389 |
| >gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|234136 TIGR03173, pbuX, xanthine permease | Back alignment and domain information |
|---|
| >gnl|CDD|233133 TIGR00801, ncs2, uracil-xanthine permease | Back alignment and domain information |
|---|
| >gnl|CDD|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 331 | |||
| KOG1292 | 510 | consensus Xanthine/uracil transporters [Nucleotide | 100.0 | |
| COG2233 | 451 | UraA Xanthine/uracil permeases [Nucleotide transpo | 100.0 | |
| PRK11412 | 433 | putative uracil/xanthine transporter; Provisional | 100.0 | |
| TIGR03616 | 429 | RutG pyrimidine utilization transport protein G. T | 100.0 | |
| PRK10720 | 428 | uracil transporter; Provisional | 100.0 | |
| TIGR00801 | 415 | ncs2 uracil-xanthine permease. NCS2 family appears | 100.0 | |
| PF00860 | 389 | Xan_ur_permease: Permease family; InterPro: IPR006 | 100.0 | |
| TIGR03173 | 406 | pbuX xanthine permease. All the seed members of th | 100.0 | |
| TIGR00843 | 395 | benE benzoate transporter. The benzoate transporte | 99.91 | |
| PF03594 | 378 | BenE: Benzoate membrane transport protein; InterPr | 99.86 | |
| COG3135 | 402 | BenE Uncharacterized protein involved in benzoate | 99.82 | |
| COG2252 | 436 | Xanthine/uracil/vitamin C permease [Nucleotide tra | 99.79 | |
| COG0659 | 554 | SUL1 Sulfate permease and related transporters (MF | 98.69 | |
| PRK11660 | 568 | putative transporter; Provisional | 98.3 | |
| TIGR00815 | 563 | sulP high affinity sulphate transporter 1. (2) SO4 | 98.06 | |
| KOG0236 | 665 | consensus Sulfate/bicarbonate/oxalate exchanger SA | 94.64 | |
| TIGR00834 | 900 | ae anion exchange protein. They preferentially cat | 93.36 | |
| PF00916 | 280 | Sulfate_transp: Sulfate transporter family; InterP | 91.46 | |
| TIGR00843 | 395 | benE benzoate transporter. The benzoate transporte | 87.2 | |
| PF11840 | 492 | DUF3360: Protein of unknown function (DUF3360); In | 86.61 | |
| KOG1172 | 876 | consensus Na+-independent Cl/HCO3 exchanger AE1 an | 84.99 |
| >KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-59 Score=455.84 Aligned_cols=308 Identities=57% Similarity=1.060 Sum_probs=290.8
Q ss_pred cccccCCCCChHHHHHHHHHHHHHHHhhhhhHHHHhhhccCCChHHH-HHHHHHHHHHHHHHHHHHHHhCCccceeeccc
Q 020061 24 ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK-AKVIQTLLFVAGLNTLLQSLFGTRLPAVMGGS 102 (331)
Q Consensus 24 ~~y~~~d~pp~~~~l~lglQh~l~~~~~~i~vP~ii~~a~gl~~~~~-~~li~a~l~~~Gi~TllQ~~~G~rlPi~~g~s 102 (331)
+.|++||.|||++.+++|+||++.|+++++++|.+++++++.+++|. +++||+++|++||.|++|+++|.|||++||+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 46999999999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred cchHHHHHHHHhhcccCCCCC---CChhhhhhhHHHHHHHHHHHHHHHHHHHhhhhHHhHhhhcCcchHHHHHHHHhhhh
Q 020061 103 YTFVPSTISIILAGRFSNYSG---DPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL 179 (331)
Q Consensus 103 f~~l~~~~ai~~~~~~~~~~~---~~~~~~~~~~~~~~Ga~ivaGlv~illg~tg~~~~l~~~fpP~V~G~vv~lIGlsl 179 (331)
|+|+++..++.+...+.|+.. .+++.|++.+|+++|++++++++++++|++|+++++.|++.|+++.|.++++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 999999999998777888642 23457999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccchhhhhhHHHHHHHHHHHHHH--cccchh--ccccchhhHHHHHHHHHHHHHHHHHhhcCCCCCCCccccccc
Q 020061 180 YEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVIK--RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASC 255 (331)
Q Consensus 180 ~~~~~~~~~~~~~l~~~~l~~iv~~~~~--~~~~~~--~~~~~~r~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~ 255 (331)
++.+++.++.||+++++.+++.+++++| +++... .++++++++++++++.+.|++|++++.+|++|+++.+++++|
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 533221 235789999999999999999999999999999999999999
Q ss_pred ccccccccCCCCccccccccccCCCcccHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCCCCccccCcccccccC
Q 020061 256 RTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQVI 331 (331)
Q Consensus 256 ~~d~~~~v~~a~w~~~P~~~~fg~P~f~~~~i~~~~~~~iv~~~esiG~~~a~~~~~~~~~~~~~~i~rgi~~dGl 331 (331)
|+|.+..++++||+.+|+|+|||.|.||.+..+.++...++.++|++|+|.+++|.++.++++++.+|||+..||+
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGi 316 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGI 316 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhH
Confidence 9999988899999999999999999999999999999999999999999999999999999999999999999985
|
|
| >COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11412 putative uracil/xanthine transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR03616 RutG pyrimidine utilization transport protein G | Back alignment and domain information |
|---|
| >PRK10720 uracil transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00801 ncs2 uracil-xanthine permease | Back alignment and domain information |
|---|
| >PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] | Back alignment and domain information |
|---|
| >TIGR03173 pbuX xanthine permease | Back alignment and domain information |
|---|
| >TIGR00843 benE benzoate transporter | Back alignment and domain information |
|---|
| >PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] | Back alignment and domain information |
|---|
| >COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11660 putative transporter; Provisional | Back alignment and domain information |
|---|
| >TIGR00815 sulP high affinity sulphate transporter 1 | Back alignment and domain information |
|---|
| >KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00834 ae anion exchange protein | Back alignment and domain information |
|---|
| >PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related | Back alignment and domain information |
|---|
| >TIGR00843 benE benzoate transporter | Back alignment and domain information |
|---|
| >PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 331 | |||
| 3qe7_A | 429 | Uracil permease; uracil transporter, URAA, transpo | 3e-21 |
| >3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 3e-21
Identities = 52/298 (17%), Positives = 96/298 (32%), Gaps = 79/298 (26%)
Query: 32 PPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL- 90
PP + I L QH M G TV LVP + N T+L G+ TLL
Sbjct: 12 PPLLQTIPLSLQHLFAMFGATV-----LVPVLFHIN------PATVLLFNGIGTLLYLFI 60
Query: 91 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVL 150
++PA +G S+ F+ + ++ G G I+ L ++
Sbjct: 61 CKGKIPAYLGSSFAFISPVLLLLPLG----------------YEVALGGFIMCGVLFCLV 104
Query: 151 GF---SGLWRNVTRFLSPLSVVPLISLVGFGL-----------YEFGFPGVAKCVEIGLP 196
F + P ++ +++++G L G +K + I +
Sbjct: 105 SFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISIT 164
Query: 197 QLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCR 256
L + V S + ++ V++ + + +
Sbjct: 165 TLAVTVLGSVL-------FRGFLAIIPILIGVLVGYALSFAM------------------ 199
Query: 257 TDRAGLID-----AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVA 309
G++D A W +P + P F+ ++ A+ V + E G A
Sbjct: 200 ----GIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTA 250
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 331 | |||
| 3qe7_A | 429 | Uracil permease; uracil transporter, URAA, transpo | 100.0 |
| >3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=355.53 Aligned_cols=256 Identities=20% Similarity=0.348 Sum_probs=226.3
Q ss_pred CCcccccCCCCChHHHHHHHHHHHHHHHhhhhhHHHHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHh-CCccceeec
Q 020061 22 PSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLF-GTRLPAVMG 100 (331)
Q Consensus 22 ~~~~y~~~d~pp~~~~l~lglQh~l~~~~~~i~vP~ii~~a~gl~~~~~~~li~a~l~~~Gi~TllQ~~~-G~rlPi~~g 100 (331)
.|+.|++|||||+++++.+|+||+++|+++++++|+++ |+|+ +++++++|++|++|+++ |+|+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~i~~GlQh~lam~~~~v~~Plil----Gl~~-------~~~l~~agi~Tllq~~~~~~~lP~~~G 70 (429)
T 3qe7_A 2 TRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFICKGKIPAYLG 70 (429)
T ss_dssp --CCBCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT----TSCH-------HHHHHHHHHHHHHHHHHTTTCCCCCEE
T ss_pred CCcccCcccCCCHHHHHHHHHHHHHHHHHHHHHhHHHh----CCCH-------HHHHHHHHHHHHHHHHHcCCCCCeEec
Confidence 35789999999999999999999999999999999998 7887 37999999999999986 899999999
Q ss_pred cccchHHHHHHHHhhcccCCCCCCChhhhhhhHHHHHHHHHHHHHHHHHHHhh--hhH-HhHhhhcCcchHHHHHHHHhh
Q 020061 101 GSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GLW-RNVTRFLSPLSVVPLISLVGF 177 (331)
Q Consensus 101 ~sf~~l~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~Ga~ivaGlv~illg~t--g~~-~~l~~~fpP~V~G~vv~lIGl 177 (331)
+||+|++++.++.+ +++++++|+++++|+++++++++ ++. +|++|+|||+|+|+++++||+
T Consensus 71 ~sfafi~~~~~i~~----------------~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl 134 (429)
T 3qe7_A 71 SSFAFISPVLLLLP----------------LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGL 134 (429)
T ss_dssp ECGGGHHHHHHHGG----------------GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHh----------------cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHH
Confidence 99999999877753 25899999999999999999986 433 699999999999999999999
Q ss_pred hhhhhhhccch-----------hhhhhHHHHHHHHHHHHHHcccchhccccchhhHHHHHHHHHHHHHHHHHhhcCCCCC
Q 020061 178 GLYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYND 246 (331)
Q Consensus 178 sl~~~~~~~~~-----------~~~~l~~~~l~~iv~~~~~~~~~~~~~~~~~r~~aiLigi~vG~i~a~~~g~~g~~~~ 246 (331)
++++.++++.+ .++.+++++++++++++++.| +++|++++|+|+++||++++.+|.
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~k-------g~~~~~aiLigivvg~~~a~~~G~------ 201 (429)
T 3qe7_A 135 ELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFR-------GFLAIIPILIGVLVGYALSFAMGI------ 201 (429)
T ss_dssp HHHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSSS-------TTTTTHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHhc-------ccchhhHHHHHHHHHHHHHHHhcC------
Confidence 99999887543 367888999999888888764 578999999999999999999987
Q ss_pred CCcccccccccccccccCCCCccccccccccCCCcccHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCCCCccccCccc
Q 020061 247 AAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV 326 (331)
Q Consensus 247 ~~~~~~~~~~~d~~~~v~~a~w~~~P~~~~fg~P~f~~~~i~~~~~~~iv~~~esiG~~~a~~~~~~~~~~~~~~i~rgi 326 (331)
.|++. +.+++|+++|+ |+.|+||++.+..++++++++++|++|++.++++..+++..+++++||++
T Consensus 202 ----------~d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l 267 (429)
T 3qe7_A 202 ----------VDTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSM 267 (429)
T ss_dssp ----------TTSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHH
T ss_pred ----------CCccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHH
Confidence 46664 67789999996 46799999999999999999999999999999999984444678999999
Q ss_pred ccccC
Q 020061 327 GWQVI 331 (331)
Q Consensus 327 ~~dGl 331 (331)
.+||+
T Consensus 268 ~adGl 272 (429)
T 3qe7_A 268 FANGL 272 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00