Citrus Sinensis ID: 020190
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 329 | ||||||
| 297743021 | 323 | unnamed protein product [Vitis vinifera] | 0.978 | 0.996 | 0.668 | 1e-122 | |
| 359482492 | 317 | PREDICTED: uncharacterized protein LOC10 | 0.942 | 0.977 | 0.684 | 1e-121 | |
| 255578955 | 315 | magnesium ion binding protein, putative | 0.933 | 0.974 | 0.652 | 1e-113 | |
| 356546091 | 324 | PREDICTED: 4'-phosphopantetheinyl transf | 0.948 | 0.962 | 0.6 | 1e-106 | |
| 449446241 | 331 | PREDICTED: 4'-phosphopantetheinyl transf | 0.933 | 0.927 | 0.584 | 1e-104 | |
| 224138474 | 274 | predicted protein [Populus trichocarpa] | 0.826 | 0.992 | 0.675 | 1e-101 | |
| 22330990 | 300 | 4'-phosphopantetheinyl transferase [Arab | 0.872 | 0.956 | 0.596 | 1e-100 | |
| 297833928 | 300 | 4'-phosphopantetheinyl transferase famil | 0.896 | 0.983 | 0.597 | 1e-100 | |
| 79607890 | 300 | 4'-phosphopantetheinyl transferase [Arab | 0.872 | 0.956 | 0.589 | 6e-99 | |
| 12322905 | 275 | unknown protein; 54614-52946 [Arabidopsi | 0.811 | 0.970 | 0.593 | 2e-92 |
| >gi|297743021|emb|CBI35888.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/326 (66%), Positives = 256/326 (78%), Gaps = 4/326 (1%)
Query: 1 MFSFVSKRLSLMMMTKVCCFQRNFSSALPPLVPVKLPSKMETHFWYVLPDEVKSESLLSQ 60
MFSF+ M K+ CFQRNFS + LVPV+LPS+METHFWY+LPDEVKS +LL+Q
Sbjct: 1 MFSFLHMASFTM---KIHCFQRNFSFSSSALVPVQLPSRMETHFWYILPDEVKSATLLNQ 57
Query: 61 YSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKP 120
Y ++LSP EK+N+ M GD KKSALLAR LVRTTIARYQ N QV+P SLKF+K IYGKP
Sbjct: 58 YLDILSPCEKENVLRMHGDNLKKSALLARALVRTTIARYQINSQVSPTSLKFRKNIYGKP 117
Query: 121 EVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFS 180
EVDW+N PPPLHFNISHTSSL+ACGVT++ PIGIDVEEKQR KN IL+FA+RYFS
Sbjct: 118 EVDWQNHYDRNPPPLHFNISHTSSLIACGVTLDSPIGIDVEEKQRTTKNNILSFARRYFS 177
Query: 181 PDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVKMGGFHH 240
P EV+ L+ ISDPEIQR E +KLWTLKEAYVKA+GRGFSAAPF FTIR R G H
Sbjct: 178 PHEVESLSIISDPEIQRLEFLKLWTLKEAYVKALGRGFSAAPFKNFTIRFRAATKGHLHL 237
Query: 241 FDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAICIEK-ENSAGGEAGVPMRL 299
+S+ASEI+VESSDDP+ LT NWQFALL+L GSHYAAIC EK +++ G+ VPM+L
Sbjct: 238 SGNSNSKASEIIVESSDDPKTLTSNWQFALLELTGSHYAAICKEKDDDTVEGKGSVPMKL 297
Query: 300 TVWKTIPFVEDERVSGTGAVVPISGL 325
TV KTIPFVED+ +SG A+V + GL
Sbjct: 298 TVRKTIPFVEDQCISGKDALVLVGGL 323
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482492|ref|XP_002274180.2| PREDICTED: uncharacterized protein LOC100241207 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255578955|ref|XP_002530330.1| magnesium ion binding protein, putative [Ricinus communis] gi|223530134|gb|EEF32046.1| magnesium ion binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356546091|ref|XP_003541465.1| PREDICTED: 4'-phosphopantetheinyl transferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449446241|ref|XP_004140880.1| PREDICTED: 4'-phosphopantetheinyl transferase sfp-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224138474|ref|XP_002322823.1| predicted protein [Populus trichocarpa] gi|222867453|gb|EEF04584.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|22330990|ref|NP_187754.2| 4'-phosphopantetheinyl transferase [Arabidopsis thaliana] gi|17979266|gb|AAL49949.1| AT3g11470/F24K9_14 [Arabidopsis thaliana] gi|20147157|gb|AAM10295.1| AT3g11470/F24K9_14 [Arabidopsis thaliana] gi|332641530|gb|AEE75051.1| 4'-phosphopantetheinyl transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297833928|ref|XP_002884846.1| 4'-phosphopantetheinyl transferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330686|gb|EFH61105.1| 4'-phosphopantetheinyl transferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|79607890|ref|NP_974284.2| 4'-phosphopantetheinyl transferase [Arabidopsis thaliana] gi|332641529|gb|AEE75050.1| 4'-phosphopantetheinyl transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|12322905|gb|AAG51443.1|AC008153_16 unknown protein; 54614-52946 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 329 | ||||||
| TAIR|locus:2080737 | 300 | AT3G11470 [Arabidopsis thalian | 0.811 | 0.89 | 0.56 | 2.9e-80 | |
| TAIR|locus:2058877 | 661 | AT2G02770 [Arabidopsis thalian | 0.702 | 0.349 | 0.5 | 4.5e-59 | |
| TIGR_CMR|CPS_3106 | 282 | CPS_3106 "4-phosphopantetheiny | 0.756 | 0.882 | 0.295 | 1.3e-22 | |
| TIGR_CMR|CBU_0221 | 243 | CBU_0221 "phosphopantethiene-- | 0.346 | 0.469 | 0.344 | 1.8e-11 | |
| UNIPROTKB|G3MZI2 | 308 | G3MZI2 "Uncharacterized protei | 0.623 | 0.665 | 0.236 | 9.7e-09 | |
| FB|FBgn0052099 | 290 | eap "ebony activating protein" | 0.440 | 0.5 | 0.319 | 3.1e-08 | |
| UNIPROTKB|F1MS62 | 309 | AASDHPPT "Uncharacterized prot | 0.623 | 0.663 | 0.232 | 5e-08 | |
| UNIPROTKB|F1PHM4 | 296 | AASDHPPT "Uncharacterized prot | 0.641 | 0.712 | 0.229 | 5.7e-08 | |
| UNIPROTKB|F1SV35 | 306 | AASDHPPT "Uncharacterized prot | 0.623 | 0.669 | 0.228 | 1.9e-07 | |
| UNIPROTKB|Q9NRN7 | 309 | AASDHPPT "L-aminoadipate-semia | 0.443 | 0.472 | 0.253 | 2.5e-07 |
| TAIR|locus:2080737 AT3G11470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 154/275 (56%), Positives = 202/275 (73%)
Query: 40 METHFWYVLPDEVKXXXXXXXXXXXXXPREKKNLYHMQGDQFKKSALLARVLVRTTIARY 99
METH W++ PDEVK P EK+ + M+GD+ KK+ALLAR LVRTTIAR
Sbjct: 29 METHLWFIRPDEVKSTSLLKHYSQLLSPTEKEKVLQMRGDELKKNALLARTLVRTTIARC 88
Query: 100 QTNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGID 159
TN +V+P++L FKK +YGKPEVDW+N PPLHFNISHT SL+ACGVTV+VP+GID
Sbjct: 89 MTNNEVDPKALMFKKNMYGKPEVDWQNYTNCNNPPLHFNISHTDSLIACGVTVHVPVGID 148
Query: 160 VEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFS 219
VE+K+R++K+ ILAFA+R++S DEVK L+ + DPE+QR+E IKLWTLKEAYVKA+G+GFS
Sbjct: 149 VEDKERKIKHDILAFAERFYSADEVKFLSTLPDPEVQRKEFIKLWTLKEAYVKALGKGFS 208
Query: 220 AAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYA 279
AAPFNTFTI+++V G ++ + +E+ S ++ W+F+LL+L SHYA
Sbjct: 209 AAPFNTFTIQSKVGTKGEYNL-----CKMTEMTASSLEETNKCDGEWKFSLLELDDSHYA 263
Query: 280 AICIEKENSAGGEAGVPMRLTVWKTIPFVEDERVS 314
AICIE + ++GG PMR+ V KTIPFVEDE +S
Sbjct: 264 AICIEDDEASGG---APMRVIVRKTIPFVEDELIS 295
|
|
| TAIR|locus:2058877 AT2G02770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CPS_3106 CPS_3106 "4-phosphopantetheinyl transferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CBU_0221 CBU_0221 "phosphopantethiene--protein transferase domain protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3MZI2 G3MZI2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0052099 eap "ebony activating protein" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MS62 AASDHPPT "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PHM4 AASDHPPT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SV35 AASDHPPT "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9NRN7 AASDHPPT "L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 329 | |||
| COG2091 | 223 | COG2091, Sfp, Phosphopantetheinyl transferase [Coe | 5e-26 | |
| pfam01648 | 108 | pfam01648, ACPS, 4'-phosphopantetheinyl transferas | 8e-16 | |
| TIGR00556 | 128 | TIGR00556, pantethn_trn, phosphopantetheine--prote | 4e-07 | |
| COG0736 | 127 | COG0736, AcpS, Phosphopantetheinyl transferase (ho | 3e-05 | |
| PRK14659 | 122 | PRK14659, acpS, 4'-phosphopantetheinyl transferase | 2e-04 | |
| PRK10351 | 187 | PRK10351, PRK10351, holo-(acyl carrier protein) sy | 2e-04 | |
| PRK00070 | 126 | PRK00070, acpS, 4'-phosphopantetheinyl transferase | 0.004 |
| >gnl|CDD|225002 COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 5e-26
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 39 KMETHFWYVLPDEVKSESLLSQYS-ELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIA 97
M T F + S+ L + L E + + + ++ L +R+L+R ++
Sbjct: 1 MMATVFVVGIQ----SDRPLIERRLPSLLSEEARRGPRYRNKRDRERFLASRLLLRALLS 56
Query: 98 RYQTNCQVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIG 157
++P L+ GKP + EN L FNISH+ VA ++ IG
Sbjct: 57 IAL---GLDPELLQISYGERGKPYLPDEN-------LLDFNISHSGDYVAVALSKEGEIG 106
Query: 158 IDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRG 217
+D+E + R + + A R+F P E L + D + + +LWTLKEA +KA G+G
Sbjct: 107 VDIE--KIRPRAGWRSLAARFFHPFEPNELAWL-DKDQDNEAFYRLWTLKEAVLKATGKG 163
Query: 218 FSAAPFNTFTIRA 230
A ++ +
Sbjct: 164 -LADGLSSVDLTP 175
|
Length = 223 |
| >gnl|CDD|216625 pfam01648, ACPS, 4'-phosphopantetheinyl transferase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|233022 TIGR00556, pantethn_trn, phosphopantetheine--protein transferase domain | Back alignment and domain information |
|---|
| >gnl|CDD|223807 COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237780 PRK14659, acpS, 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182399 PRK10351, PRK10351, holo-(acyl carrier protein) synthase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234610 PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| KOG0945 | 289 | consensus Alpha-aminoadipic semialdehyde dehydroge | 100.0 | |
| COG2091 | 223 | Sfp Phosphopantetheinyl transferase [Coenzyme meta | 100.0 | |
| PRK10351 | 187 | holo-(acyl carrier protein) synthase 2; Provisiona | 99.97 | |
| PRK10251 | 207 | phosphopantetheinyltransferase component of entero | 99.9 | |
| COG2977 | 228 | EntD Phosphopantetheinyl transferase component of | 99.66 | |
| PRK14659 | 122 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.6 | |
| PF01648 | 115 | ACPS: 4'-phosphopantetheinyl transferase superfami | 99.58 | |
| PRK14656 | 126 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.42 | |
| TIGR00556 | 128 | pantethn_trn phosphopantethiene--protein transfera | 99.39 | |
| PRK14657 | 123 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.35 | |
| PRK14660 | 125 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.32 | |
| PRK14661 | 169 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.31 | |
| PRK14658 | 115 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.28 | |
| TIGR00516 | 121 | acpS holo-[acyl-carrier-protein] synthase. Formerl | 99.25 | |
| PRK00070 | 126 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.21 | |
| COG0736 | 127 | AcpS Phosphopantetheinyl transferase (holo-ACP syn | 99.16 | |
| PRK14663 | 116 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.16 | |
| PRK14662 | 120 | acpS 4'-phosphopantetheinyl transferase; Provision | 99.1 | |
| PRK14658 | 115 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.92 | |
| PRK00070 | 126 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.9 | |
| PRK14659 | 122 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.53 | |
| PRK14660 | 125 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.5 | |
| COG0736 | 127 | AcpS Phosphopantetheinyl transferase (holo-ACP syn | 98.46 | |
| TIGR00516 | 121 | acpS holo-[acyl-carrier-protein] synthase. Formerl | 98.43 | |
| PRK14662 | 120 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.39 | |
| PRK14663 | 116 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.39 | |
| PRK14657 | 123 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.15 | |
| PRK14656 | 126 | acpS 4'-phosphopantetheinyl transferase; Provision | 98.12 | |
| PRK14661 | 169 | acpS 4'-phosphopantetheinyl transferase; Provision | 97.7 | |
| TIGR00556 | 128 | pantethn_trn phosphopantethiene--protein transfera | 97.02 | |
| PF01648 | 115 | ACPS: 4'-phosphopantetheinyl transferase superfami | 96.61 | |
| PF13986 | 47 | DUF4224: Domain of unknown function (DUF4224) | 83.48 |
| >KOG0945 consensus Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase [Amino acid transport and metabolism; Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=296.41 Aligned_cols=245 Identities=35% Similarity=0.543 Sum_probs=199.5
Q ss_pred CCCCCCCCCCCCCeEEEEEEe-CCCCCChhhHHHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q 020190 28 LPPLVPVKLPSKMETHFWYVL-PDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVN 106 (329)
Q Consensus 28 ~~~~~~~~~~~~~~v~lw~~~-~~~~~~~~~~~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g~~ 106 (329)
.|.+.+...|.-.+.+.|.+. .+...+-+++..+...|+++|++|+.+|+..+|++..|+||+++|++++.+ ++++
T Consensus 3 ~~~~~~~~v~r~~~~~~wAf~~~~~e~s~a~f~~a~~~ls~se~erI~qfr~~~DakaaL~grLl~R~~~a~~---~~~~ 79 (289)
T KOG0945|consen 3 LPSLVPCKVPRWMISLQWAFVVPDFEKSLALFRHAVQSLSPSEKERILQFRFDEDAKAALAGRLLVRHLVAIY---LGVP 79 (289)
T ss_pred cchhhhhhhhHHHhhhhhheecchhhhhHHHHHHHHHhCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---hCCC
Confidence 466677777765678888543 333344557888899999999999999999999999999999999999999 7999
Q ss_pred CCceeEecCCCCccEEeccCCCCCCCCCceEEeccCCCceeEEEecccccccchhhh-hhhhhhhHHHHHHhcCCHHHHH
Q 020190 107 PRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEK-QRRLKNKILAFAKRYFSPDEVK 185 (329)
Q Consensus 107 p~~i~~~~~~~GKP~l~~~~~~~~~~~~l~fSISHs~~~v~~avs~~~~vGVDIE~~-~~~~~~~~~~l~~~~fs~~E~~ 185 (329)
|++++|.++.+|||++.... .....+.++|||||.|++++||.....+|||||++. .+....++.++++++||+.|++
T Consensus 80 ~n~l~f~rt~~GKP~l~qn~-~~p~~~~f~fNvSH~gd~iv~at~~~~~VGIDIm~~~~r~~~~e~l~~~kr~fS~~E~k 158 (289)
T KOG0945|consen 80 WNELRFSRTEYGKPVLWQNY-SNPFSPTFGFNVSHQGDLIVVATTVHVPVGIDIMRPKERKTAHEELELFKRVFSEDEWK 158 (289)
T ss_pred hhHeEeecccCCCcchhhcc-cCCCCCCccceeeeeceEEEEeccCCcccceeeeecccccchHHHHHHHHHhcCHHHHH
Confidence 99999999999999554322 112357899999999999999999899999999998 4445678899999999999999
Q ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHhhcCCCCCCCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCC
Q 020190 186 LLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRN 265 (329)
Q Consensus 186 ~l~~~~~~~~~~~~f~~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 265 (329)
.|+..+++..+...||++||+||||+||+|.||. .+|+.++|...+......+ +...... ..+ +...++
T Consensus 159 ~l~s~~~e~~~~~~FyrlWtLKEa~lKAtGvGl~-~~L~~~~F~~~p~~~~~g~------s~~~T~~-~~~---g~~~~q 227 (289)
T KOG0945|consen 159 MLKSAPDEEVQRTMFYRLWTLKEAILKATGVGLN-TDLSLLDFSANPFNTATGQ------SKVETLD-EVD---GIFQSQ 227 (289)
T ss_pred HHHcCCChhhHHHHHHHHHHHHHHHHHHhcCCcc-cccccccccccccccccce------eeeeeee-ccC---Cccchh
Confidence 9999998889999999999999999999999999 7999999987665411110 1111110 011 245788
Q ss_pred EEEEEeecCCCeEEEEEEeccC
Q 020190 266 WQFALLDLAGSHYAAICIEKEN 287 (329)
Q Consensus 266 W~~~~~~l~~~~~~Ava~~~~~ 287 (329)
|.|....++..|.+|||.+...
T Consensus 228 w~feE~~i~~~h~vav~~~k~d 249 (289)
T KOG0945|consen 228 WNFEESFIDEAHSVAVCMEKSD 249 (289)
T ss_pred hhhhhhhccccceeEEeccCCC
Confidence 9999999999999999998764
|
|
| >COG2091 Sfp Phosphopantetheinyl transferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK10351 holo-(acyl carrier protein) synthase 2; Provisional | Back alignment and domain information |
|---|
| >PRK10251 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex; Provisional | Back alignment and domain information |
|---|
| >COG2977 EntD Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding | Back alignment and domain information |
|---|
| >PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain | Back alignment and domain information |
|---|
| >PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00516 acpS holo-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
| >PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14658 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK00070 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14659 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14660 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG0736 AcpS Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] | Back alignment and domain information |
|---|
| >TIGR00516 acpS holo-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
| >PRK14662 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14663 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14657 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14656 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK14661 acpS 4'-phosphopantetheinyl transferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00556 pantethn_trn phosphopantethiene--protein transferase domain | Back alignment and domain information |
|---|
| >PF01648 ACPS: 4'-phosphopantetheinyl transferase superfamily; InterPro: IPR008278 These proteins transfer the 4'-phosphopantetheine (4'-PP) moiety from coenzyme A (CoA) to the invariant serine of pp-binding | Back alignment and domain information |
|---|
| >PF13986 DUF4224: Domain of unknown function (DUF4224) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 329 | ||||
| 1qr0_A | 228 | Crystal Structure Of The 4'-Phosphopantetheinyl Tra | 8e-15 | ||
| 2byd_A | 323 | Structure Of Aminoadipate-semialdehyde Dehydrogenas | 2e-08 | ||
| 2cg5_A | 319 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-08 |
| >pdb|1QR0|A Chain A, Crystal Structure Of The 4'-Phosphopantetheinyl Transferase Sfp- Coenzyme A Complex Length = 228 | Back alignment and structure |
|
| >pdb|2BYD|A Chain A, Structure Of Aminoadipate-semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase Length = 323 | Back alignment and structure |
| >pdb|2CG5|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase In Complex With Cytosolic Acyl Carrier Protein And Coenzyme A Length = 319 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 329 | |||
| 2c43_A | 323 | Aminoadipate-semialdehyde dehydrogenase- phosphopa | 4e-48 | |
| 1qr0_A | 228 | 4'-phosphopantetheinyl transferase SFP; protein-co | 1e-44 | |
| 3f09_A | 143 | Holo-[acyl-carrier-protein] synthase; structural g | 8e-08 | |
| 1f7l_A | 121 | Holo-(acyl carrier protein) synthase; 9-strand pse | 1e-06 | |
| 1fth_A | 122 | ACPS, acyl carrier protein synthase; bacterial fat | 3e-06 | |
| 2bdd_A | 182 | ACP-synthase; structural genomics, structural geno | 9e-06 | |
| 3hyk_A | 122 | Holo-[acyl-carrier-protein] synthase; structural g | 9e-06 | |
| 2qg8_A | 163 | Acyl carrier protein synthase PY06285; malaria, 3' | 1e-05 | |
| 2was_A | 122 | 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA | 1e-05 | |
| 3h88_A | 129 | Holo-[acyl-carrier-protein] synthase; alpha-beta s | 2e-05 | |
| 2wds_A | 143 | Holo-[acyl-carrier-protein] synthase; phosphopante | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 3nfd_A | 153 | Phosphopantethiene protein transferase, PPT1P; acy | 8e-05 |
| >2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Length = 323 | Back alignment and structure |
|---|
Score = 163 bits (413), Expect = 4e-48
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 20/267 (7%)
Query: 45 WYV-LPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNC 103
W + S + + P EK+ + + K+A+ R+++R +A
Sbjct: 29 WAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEK---L 85
Query: 104 QVNPRSLKFKKTIYGKPEVDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEK 163
+ ++ ++T GKP + ++ + + P +FNISH + +GID+ +
Sbjct: 86 NIPWNHIRLQRTAKGKPVLAKDSSNPY--PNFNFNISHQGDYAVLAAEPELQVGIDIMKT 143
Query: 164 QRRLKNKILAF---AKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAVGRGFSA 220
+ I F KR F+ E + + + D Q + W LKE+++KA+G G
Sbjct: 144 SFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGL-G 202
Query: 221 APFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAA 280
+ + + D E + W F + H+ A
Sbjct: 203 FELQRLEFD--------LSPLNLDIGQVYKETRLFLDGEE--EKEWAFEESKIDEHHFVA 252
Query: 281 ICIEKENSAGGEAGVPMRLTVWKTIPF 307
+ + K + + + + F
Sbjct: 253 VALRKPDGSRHQDVPSQDDSKPTQRQF 279
|
| >1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Length = 228 | Back alignment and structure |
|---|
| >1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Length = 121 | Back alignment and structure |
|---|
| >1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Length = 122 | Back alignment and structure |
|---|
| >2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Length = 182 | Back alignment and structure |
|---|
| >3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} Length = 122 | Back alignment and structure |
|---|
| >2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Length = 163 | Back alignment and structure |
|---|
| >2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Length = 122 | Back alignment and structure |
|---|
| >2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Length = 143 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3nfd_A Phosphopantethiene protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| 1qr0_A | 228 | 4'-phosphopantetheinyl transferase SFP; protein-co | 100.0 | |
| 2c43_A | 323 | Aminoadipate-semialdehyde dehydrogenase- phosphopa | 100.0 | |
| 3f09_A | 143 | Holo-[acyl-carrier-protein] synthase; structural g | 99.7 | |
| 1fth_A | 122 | ACPS, acyl carrier protein synthase; bacterial fat | 99.69 | |
| 1f7l_A | 121 | Holo-(acyl carrier protein) synthase; 9-strand pse | 99.6 | |
| 2was_A | 122 | 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA | 99.57 | |
| 3hyk_A | 122 | Holo-[acyl-carrier-protein] synthase; structural g | 99.56 | |
| 3h88_A | 129 | Holo-[acyl-carrier-protein] synthase; alpha-beta s | 99.56 | |
| 2bdd_A | 182 | ACP-synthase; structural genomics, structural geno | 99.44 | |
| 2qg8_A | 163 | Acyl carrier protein synthase PY06285; malaria, 3' | 99.43 | |
| 3gwm_A | 129 | Holo-[acyl-carrier-protein] synthase; HOMO-trimer, | 99.42 | |
| 2wds_A | 143 | Holo-[acyl-carrier-protein] synthase; phosphopante | 99.42 | |
| 3ota_A | 129 | Holo-[acyl-carrier-protein] synthase; structural g | 99.33 | |
| 3nfd_A | 153 | Phosphopantetheine protein transferase, PPT1P; acy | 99.22 | |
| 1f7l_A | 121 | Holo-(acyl carrier protein) synthase; 9-strand pse | 99.1 | |
| 3f09_A | 143 | Holo-[acyl-carrier-protein] synthase; structural g | 99.0 | |
| 3hyk_A | 122 | Holo-[acyl-carrier-protein] synthase; structural g | 98.76 | |
| 1fth_A | 122 | ACPS, acyl carrier protein synthase; bacterial fat | 98.71 | |
| 3gwm_A | 129 | Holo-[acyl-carrier-protein] synthase; HOMO-trimer, | 98.63 | |
| 3ota_A | 129 | Holo-[acyl-carrier-protein] synthase; structural g | 98.61 | |
| 3h88_A | 129 | Holo-[acyl-carrier-protein] synthase; alpha-beta s | 98.54 | |
| 2was_A | 122 | 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FA | 98.48 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.46 | |
| 2qg8_A | 163 | Acyl carrier protein synthase PY06285; malaria, 3' | 98.42 | |
| 2bdd_A | 182 | ACP-synthase; structural genomics, structural geno | 98.36 | |
| 3nfd_A | 153 | Phosphopantetheine protein transferase, PPT1P; acy | 98.33 | |
| 2wds_A | 143 | Holo-[acyl-carrier-protein] synthase; phosphopante | 98.32 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.24 | |
| 1qr0_A | 228 | 4'-phosphopantetheinyl transferase SFP; protein-co | 97.27 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 96.81 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 96.69 | |
| 2c43_A | 323 | Aminoadipate-semialdehyde dehydrogenase- phosphopa | 95.63 |
| >1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=301.50 Aligned_cols=211 Identities=26% Similarity=0.433 Sum_probs=183.9
Q ss_pred EEEEEEeCCCCCChhhHHHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEecCCCCccE
Q 020190 42 THFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPE 121 (329)
Q Consensus 42 v~lw~~~~~~~~~~~~~~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g~~p~~i~~~~~~~GKP~ 121 (329)
++||.++++...+++.++.+.++|+++|++++.+|+++++|.+|++||.++|++++++ +|++|.+|.|.++++|||+
T Consensus 1 ~~v~~~~~~~~~~~~~~~~~~~~Ls~~E~~~~~~~~~~~~r~~~la~R~~~r~al~~~---lg~~~~~i~i~~~~~GkP~ 77 (228)
T 1qr0_A 1 MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ---YQLDKSDIRFSTQEYGKPC 77 (228)
T ss_dssp CEEEEEECSSCCCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH---TTCCGGGCCCEECTTSCEE
T ss_pred CEEEEEECCCcCCHHHHHHHHhhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH---hCcCHHHcEEeeCcCCCce
Confidence 4799999876556677889999999999999999999999999999999999999998 7999999999999999999
Q ss_pred EeccCCCCCCCCCceEEeccCCCceeEEEecccccccchhhhhhhhhhhHHHHHHhcCCHHHHHHHHcCCChhHHHHHHH
Q 020190 122 VDWENGDKWCPPPLHFNISHTSSLVACGVTVNVPIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELI 201 (329)
Q Consensus 122 l~~~~~~~~~~~~l~fSISHs~~~v~~avs~~~~vGVDIE~~~~~~~~~~~~l~~~~fs~~E~~~l~~~~~~~~~~~~f~ 201 (329)
+.. .++++||||||+++++||++ ..+||||||.+++. + .++++++||+.|++++.+.+ .+.+.+.|+
T Consensus 78 l~~-------~~~~~~SiSHs~~~a~~a~~-~~~vGiDie~i~~~---~-~~~~~~~~t~~E~~~l~~~~-~~~~~~~~~ 144 (228)
T 1qr0_A 78 IPD-------LPDAHFNISHSGRWVIGAFD-SQPIGIDIEKTKPI---S-LEIAKRFFSKTEYSDLLAKD-KDEQTDYFY 144 (228)
T ss_dssp CTT-------CTTCEEEEEEETTEEEEEEE-SSCCEEEEEECCCC---C-HHHHSSSSCHHHHHHHHHSC-HHHHHHHHH
T ss_pred EeC-------CCCceEEecccCCeEEEEEC-CCCEEEEeEECCCC---c-HHHHHHhCCHHHHHHHHhCC-hhhHHHHHH
Confidence 973 35899999999999999998 68999999998763 2 38899999999999999876 356778999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCceEEEEecCCCceeEEeccCCccccchhhccCCCCCCCCCCCEEEEEeecCCCeEEEE
Q 020190 202 KLWTLKEAYVKAVGRGFSAAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLAGSHYAAI 281 (329)
Q Consensus 202 ~~WtlKEA~~Ka~G~GL~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~W~~~~~~l~~~~~~Av 281 (329)
++||+||||+||+|+||. .+|+.|+|..++.+.+.+.+. ....+|++..+.++++|++||
T Consensus 145 ~~wt~KEA~~Ka~G~gl~-~~~~~~~i~~~~~g~~~~~~~-------------------~~~~~~~~~s~~~~~~y~~Av 204 (228)
T 1qr0_A 145 HLWSMKESFIKQEGKGLS-LPLDSFSVRLHQDGQVSIELP-------------------DSHSPCYIKTYEVDPGYKMAV 204 (228)
T ss_dssp HHHHHHHHHHHHHCSTTS-CCSSCCEEEECGGGCEEEECS-------------------CTTSCCEEEEECSCTTEEEEE
T ss_pred HHHHHHHHHHHHhCCCCC-CCCceEEEeeCCCCCeEEecC-------------------CCCCCeEEEEEecCCCEEEEE
Confidence 999999999999999998 799999998876554444321 124579999999999999999
Q ss_pred EEeccCC
Q 020190 282 CIEKENS 288 (329)
Q Consensus 282 a~~~~~~ 288 (329)
|+..+..
T Consensus 205 ~~~~~~~ 211 (228)
T 1qr0_A 205 CAAHPDF 211 (228)
T ss_dssp EESSSCC
T ss_pred EEecCCC
Confidence 9988754
|
| >2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* | Back alignment and structure |
|---|
| >1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* | Back alignment and structure |
|---|
| >1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* | Back alignment and structure |
|---|
| >2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B | Back alignment and structure |
|---|
| >3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 | Back alignment and structure |
|---|
| >2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} | Back alignment and structure |
|---|
| >2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} | Back alignment and structure |
|---|
| >3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A | Back alignment and structure |
|---|
| >2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* | Back alignment and structure |
|---|
| >3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* | Back alignment and structure |
|---|
| >1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* | Back alignment and structure |
|---|
| >3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, I diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} SCOP: d.150.1.0 | Back alignment and structure |
|---|
| >1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* | Back alignment and structure |
|---|
| >3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* 4hc6_A | Back alignment and structure |
|---|
| >2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B | Back alignment and structure |
|---|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
| >2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SG structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} | Back alignment and structure |
|---|
| >2bdd_A ACP-synthase; structural genomics, structural genomics conso SGC, transferase; 2.28A {Plasmodium yoelii yoelii} | Back alignment and structure |
|---|
| >3nfd_A Phosphopantetheine protein transferase, PPT1P; acyl carrier protein synthase, mycobacterium tuberculosis, A carrier protein; HET: COA; 1.89A {Corynebacterium ammoniagenes} PDB: 3ne9_A* | Back alignment and structure |
|---|
| >2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* | Back alignment and structure |
|---|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
| >1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 | Back alignment and structure |
|---|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
| >2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 329 | ||||
| d1qr0a2 | 127 | d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl trans | 1e-18 | |
| d1qr0a1 | 101 | d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transfe | 4e-18 | |
| d1ftha_ | 117 | d.150.1.2 (A:) Holo-(acyl carrier protein) synthas | 2e-05 |
| >d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 127 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: 4'-phosphopantetheinyl transferase superfamily: 4'-phosphopantetheinyl transferase family: 4'-Phosphopantetheinyl transferase SFP domain: 4'-Phosphopantetheinyl transferase SFP species: Bacillus subtilis [TaxId: 1423]
Score = 78.6 bits (193), Expect = 1e-18
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 25/133 (18%)
Query: 155 PIGIDVEEKQRRLKNKILAFAKRYFSPDEVKLLTAISDPEIQRQELIKLWTLKEAYVKAV 214
PIGID+E+ + L AKR+FS E L A D + Q LW++KE+++K
Sbjct: 2 PIGIDIEKTKPI----SLEIAKRFFSKTEYSDLLAK-DKDEQTDYFYHLWSMKESFIKQE 56
Query: 215 GRGFSAAPFNTFTIRARVVKMGGFHHFDTQHSEASEIVVESSDDPENLTRNWQFALLDLA 274
G+G S F + + ++ +E D ++
Sbjct: 57 GKGLS----------------LPLDSFSVRLHQDGQVSIELPDSHS----PCYIKTYEVD 96
Query: 275 GSHYAAICIEKEN 287
+ A+C +
Sbjct: 97 PGYKMAVCAAHPD 109
|
| >d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} Length = 101 | Back information, alignment and structure |
|---|
| >d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} Length = 117 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 329 | |||
| d1qr0a1 | 101 | 4'-Phosphopantetheinyl transferase SFP {Bacillus s | 99.9 | |
| d1qr0a2 | 127 | 4'-Phosphopantetheinyl transferase SFP {Bacillus s | 99.9 | |
| d1ftha_ | 117 | Holo-(acyl carrier protein) synthase ACPS {Strepto | 99.52 | |
| d1f7la_ | 118 | Holo-(acyl carrier protein) synthase ACPS {Bacillu | 99.32 | |
| d1ftha_ | 117 | Holo-(acyl carrier protein) synthase ACPS {Strepto | 98.91 | |
| d1f7la_ | 118 | Holo-(acyl carrier protein) synthase ACPS {Bacillu | 98.75 | |
| d1qr0a2 | 127 | 4'-Phosphopantetheinyl transferase SFP {Bacillus s | 95.62 |
| >d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: 4'-phosphopantetheinyl transferase superfamily: 4'-phosphopantetheinyl transferase family: 4'-Phosphopantetheinyl transferase SFP domain: 4'-Phosphopantetheinyl transferase SFP species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=7.1e-24 Score=167.53 Aligned_cols=100 Identities=26% Similarity=0.417 Sum_probs=93.4
Q ss_pred EEEEEEeCCCCCChhhHHHHhccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCceeEecCCCCccE
Q 020190 42 THFWYVLPDEVKSESLLSQYSELLSPREKKNLYHMQGDQFKKSALLARVLVRTTIARYQTNCQVNPRSLKFKKTIYGKPE 121 (329)
Q Consensus 42 v~lw~~~~~~~~~~~~~~~~~~~Ls~~Er~r~~r~~~~~dr~~~L~~R~llr~~L~~~~~~~g~~p~~i~~~~~~~GKP~ 121 (329)
+.||.+.++...+.+.+++++++|+++|++|+.||++++||+++++||+++|++++++ ++++|.+|.|.++++|||+
T Consensus 1 ~~i~~i~~~~~~~~~~~~~~~~~Ls~~e~~r~~r~~~~~dr~~~l~~r~llr~~l~~~---~~~~p~~i~~~~~~~GKP~ 77 (101)
T d1qr0a1 1 MKIYGIYMDRPLSQEENERFMTFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQ---YQLDKSDIRFSTQEYGKPC 77 (101)
T ss_dssp CEEEEEECSSCCCHHHHHHHHTTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHH---TTCCGGGCCCEECTTSCEE
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHCCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH---hCCCccceeEEeCCCCCcc
Confidence 3689998887777888999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred EeccCCCCCCCCCceEEeccCCCceeEEEe
Q 020190 122 VDWENGDKWCPPPLHFNISHTSSLVACGVT 151 (329)
Q Consensus 122 l~~~~~~~~~~~~l~fSISHs~~~v~~avs 151 (329)
+.+ .++++|||||||+||+||++
T Consensus 78 l~~-------~~~i~FNiSHsg~~vv~avs 100 (101)
T d1qr0a1 78 IPD-------LPDAHFNISHSGRWVIGAFD 100 (101)
T ss_dssp CTT-------CTTCEEEEEEETTEEEEEEE
T ss_pred ccC-------CCCcEEEecccCCeEEEEEe
Confidence 974 36899999999999999997
|
| >d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1ftha_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1f7la_ d.150.1.2 (A:) Holo-(acyl carrier protein) synthase ACPS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1qr0a2 d.150.1.1 (A:102-228) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|