Citrus Sinensis ID: 020201

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccEEcccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHccccccccccHHHccccEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHccccEEEEEEccccEEcHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEEccccccccccccEEEEEEcccccccccc
ccccccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccHcHccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEEcccccccccccEEEEcccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEccccccccccccccEEEEEccccccccccc
mpsspkffyarsaaspsprkstVLIFSCLIIGIAGFVLGISAFLYagrgahrcsnfnptSVRVVWdnhgegsngisgsqdddnnnnnnikrhkvMGFVGiqtgfgsggrrrslrmtwmpsdhqGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEeysklpyktLAFFKAAYALYdsefyvkadddiylrpdRLSLLLakerphsqtylgcmkkgpvftdphlkwyepqsyllgkeyflhaygplyaLSADVVVSLVALKnnsfrmfsnedvTIGSWMLAMnvnhednrelcqsdctssfiavwdipkcsgwwli
mpsspkffyarsaaspsprkSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGsngisgsqdddnnNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKerphsqtylgcmkkgpvftdpHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
MPSSPKFFYarsaaspsprKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEgsngisgsqdddnnnnnniKRHKVMGFVGIQTgfgsggrrrslrMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPlyalsadvvvslvalKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
*********************TVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDN**************************VMGFVGIQTGFGS*******RMTWM******LQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWL*
*****K***********PRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAH*******************************************MGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
*******************KSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
****************SPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGW*LI
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRCSNFNPTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQSDCTSSFIAVWDIPKCSGWWLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
Q8L7M1345 Probable beta-1,3-galacto yes no 0.954 0.910 0.695 1e-132
Q9LKA9343 Probable beta-1,3-galacto no no 0.948 0.909 0.701 1e-130
Q66GS2371 Probable beta-1,3-galacto no no 0.899 0.797 0.603 1e-101
Q9SAA4384 Probable beta-1,3-galacto no no 0.683 0.585 0.374 4e-40
A8MRC7407 Probable beta-1,3-galacto no no 0.668 0.540 0.361 9e-40
Q8LEJ9407 Probable beta-1,3-galacto no no 0.693 0.560 0.371 4e-39
Q9C809395 Probable beta-1,3-galacto no no 0.677 0.564 0.365 6e-39
Q9LM60398 Probable beta-1,3-galacto no no 0.662 0.547 0.390 7e-39
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.650 0.544 0.365 6e-38
Q9MAP8399 Probable beta-1,3-galacto no no 0.650 0.536 0.357 7e-38
>sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1 Back     alignment and function desciption
 Score =  471 bits (1211), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/328 (69%), Positives = 267/328 (81%), Gaps = 14/328 (4%)

Query: 1   MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAG---RGAHRCSNFN 57
           M S  K F+ARS+ + + R + +++ + L IGIAGF  G++  L  G    G +  +N  
Sbjct: 1   MHSPRKLFHARSSLA-TRRSTALVVLTSLAIGIAGFTFGLAVILIPGLRLTGRNCLTNTP 59

Query: 58  PTSVRVVWDNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTW 117
           P +VRVVWD  G  +  +SG +          KRHKVMGFVGIQTGFGS GRRRSLR TW
Sbjct: 60  PKTVRVVWDVAGNSNGVVSGEK----------KRHKVMGFVGIQTGFGSAGRRRSLRKTW 109

Query: 118 MPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYK 177
           MPSD +GL++LEE+TGLA RF+IG+T  + KMA+LR+E+AEYDDF+LLDIEEEYSKLPYK
Sbjct: 110 MPSDPEGLRRLEESTGLAIRFMIGKTKSEEKMAQLRREIAEYDDFVLLDIEEEYSKLPYK 169

Query: 178 TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHL 237
           TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKER HSQTYLGC+KKGPVFTDP L
Sbjct: 170 TLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCLKKGPVFTDPKL 229

Query: 238 KWYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNV 297
           KWYEP S+LLGKEYFLHAYGP+YALSADVV SLVALKNNSFRMF+NEDVTIG+WMLAMNV
Sbjct: 230 KWYEPLSHLLGKEYFLHAYGPIYALSADVVASLVALKNNSFRMFNNEDVTIGAWMLAMNV 289

Query: 298 NHEDNRELCQSDCTSSFIAVWDIPKCSG 325
           NHE++  LC+ +C+ S +AVWDIPKCSG
Sbjct: 290 NHENHHILCEPECSPSSVAVWDIPKCSG 317
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9LKA9|B3GTD_ARATH Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana GN=B3GALT13 PE=2 SV=1 Back     alignment and function description
>sp|Q66GS2|B3GTC_ARATH Probable beta-1,3-galactosyltransferase 12 OS=Arabidopsis thaliana GN=B3GALT12 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
224121586351 predicted protein [Populus trichocarpa] 0.978 0.917 0.746 1e-140
225461642348 PREDICTED: probable beta-1,3-galactosylt 0.972 0.919 0.754 1e-134
30695469345 putative beta-1,3-galactosyltransferase 0.954 0.910 0.695 1e-130
297834360343 galactosyltransferase family protein [Ar 0.948 0.909 0.698 1e-129
224117060326 predicted protein [Populus trichocarpa] 0.896 0.904 0.765 1e-129
255566583343 Beta-1,3-galactosyltransferase sqv-2, pu 0.948 0.909 0.714 1e-129
356549673336 PREDICTED: probable beta-1,3-galactosylt 0.939 0.919 0.716 1e-128
15232447343 putative beta-1,3-galactosyltransferase 0.948 0.909 0.701 1e-128
297847718349 galactosyltransferase family protein [Ar 0.954 0.899 0.689 1e-128
356517060338 PREDICTED: probable beta-1,3-galactosylt 0.942 0.917 0.726 1e-127
>gi|224121586|ref|XP_002330737.1| predicted protein [Populus trichocarpa] gi|222872513|gb|EEF09644.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/327 (74%), Positives = 277/327 (84%), Gaps = 5/327 (1%)

Query: 1   MPSSPKFFYARSAASPSPRKSTVLIFSCLIIGIAGFVLGISAFLYAGRGAHRC-SNFNPT 59
           MPSSPKFF++R +   + R+STVLI SCL+IGI+GF+ G+++FL      +RC +N  P 
Sbjct: 1   MPSSPKFFHSRLSQPSNSRRSTVLILSCLLIGISGFIFGLTSFLTCSH-TYRCFNNSPPR 59

Query: 60  SVRVVW-DNHGEGSNGISGSQDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWM 118
           SVRVVW  N     NG+  +   D       +R KVMGFVGIQTGFGS GRRRSLR TWM
Sbjct: 60  SVRVVWGTNSNMNDNGVGNAVLLDGEERR--ERQKVMGFVGIQTGFGSSGRRRSLRKTWM 117

Query: 119 PSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKT 178
           PSD QGLQ+LEE+TGLAFRF+IGRTND+SKMAEL++E+AEYDDF+LLDIEE+YS+LPYKT
Sbjct: 118 PSDRQGLQRLEESTGLAFRFVIGRTNDKSKMAELKREIAEYDDFLLLDIEEQYSQLPYKT 177

Query: 179 LAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLK 238
           LAFFKAAYAL+DSEFYVKADDDIYLRPDRLS LLAKER HSQTYLGC+KKGPVFTDP LK
Sbjct: 178 LAFFKAAYALFDSEFYVKADDDIYLRPDRLSTLLAKERAHSQTYLGCLKKGPVFTDPKLK 237

Query: 239 WYEPQSYLLGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVN 298
           WYEP SYLLGKEYFLHAYGP+YALSADVV SLVAL+NNSFRMFSNEDVTIG+W+LAMNVN
Sbjct: 238 WYEPLSYLLGKEYFLHAYGPIYALSADVVASLVALRNNSFRMFSNEDVTIGAWILAMNVN 297

Query: 299 HEDNRELCQSDCTSSFIAVWDIPKCSG 325
           HEDNR LC  +CT S IAVWDIPKCSG
Sbjct: 298 HEDNRALCSPECTPSSIAVWDIPKCSG 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225461642|ref|XP_002283081.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|30695469|ref|NP_175736.2| putative beta-1,3-galactosyltransferase 14 [Arabidopsis thaliana] gi|75154190|sp|Q8L7M1.1|B3GTE_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 14 gi|22135994|gb|AAM91579.1| unknown protein [Arabidopsis thaliana] gi|31711828|gb|AAP68270.1| At1g53290 [Arabidopsis thaliana] gi|332194798|gb|AEE32919.1| putative beta-1,3-galactosyltransferase 14 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297834360|ref|XP_002885062.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330902|gb|EFH61321.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224117060|ref|XP_002317466.1| predicted protein [Populus trichocarpa] gi|222860531|gb|EEE98078.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255566583|ref|XP_002524276.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223536467|gb|EEF38115.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356549673|ref|XP_003543216.1| PREDICTED: probable beta-1,3-galactosyltransferase 13-like [Glycine max] Back     alignment and taxonomy information
>gi|15232447|ref|NP_188114.1| putative beta-1,3-galactosyltransferase 13 [Arabidopsis thaliana] gi|75273746|sp|Q9LKA9.1|B3GTD_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 13 gi|8777479|dbj|BAA97059.1| unnamed protein product [Arabidopsis thaliana] gi|17979337|gb|AAL49894.1| putative galactosyltransferase [Arabidopsis thaliana] gi|22136686|gb|AAM91662.1| putative galactosyltransferase [Arabidopsis thaliana] gi|332642073|gb|AEE75594.1| putative beta-1,3-galactosyltransferase 13 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297847718|ref|XP_002891740.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337582|gb|EFH67999.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356517060|ref|XP_003527208.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2086370343 AT3G14960 [Arabidopsis thalian 0.945 0.906 0.632 4.2e-102
TAIR|locus:2009665345 AT1G53290 [Arabidopsis thalian 0.948 0.904 0.603 6.9e-102
TAIR|locus:2057442371 AT2G26100 [Arabidopsis thalian 0.887 0.787 0.540 1.3e-82
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.702 0.580 0.349 2e-33
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.662 0.535 0.330 6.7e-33
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.665 0.570 0.331 3.3e-31
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 0.650 0.523 0.333 1.1e-30
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.638 0.526 0.325 4.9e-30
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.653 0.528 0.301 1e-29
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.650 0.544 0.321 2.1e-29
TAIR|locus:2086370 AT3G14960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
 Identities = 208/329 (63%), Positives = 233/329 (70%)

Query:     1 MPSSPKFFYXXXXXXXXXXKSTVLI-FSCLIIGIAGFVLGISAFLYAG-RGAHR-C-SNF 56
             M SSPK F+          +ST LI F+ L IG+ GF+ G+S  L+ G R + R C +N 
Sbjct:     1 MSSSPKLFHARPSFFTR--RSTPLIVFTSLAIGLTGFLFGLSTILFPGLRLSGRSCLTNL 58

Query:    57 NPTSVRVVWDNHGEXXXXXXXXXXXXXXXXXXXKRHKVMGFVGIQTXXXXXXXXXXXXMT 116
              P +V++VWD  G                    KRHKVMGFVGIQT             T
Sbjct:    59 PPKTVKIVWDVAGNSIVNGEV------------KRHKVMGFVGIQTGFRSAGRRRALRNT 106

Query:   117 WMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEEEYSKLPY 176
             WMPSD +GL++LEE+TGLA RFIIG+T D++KM ELR EVA YDDFILLDIEEEYSKLPY
Sbjct:   107 WMPSDPEGLRRLEESTGLAIRFIIGKTKDEAKMVELRSEVAMYDDFILLDIEEEYSKLPY 166

Query:   177 KTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPH 236
             KTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKER HSQTYLGCMKKGPVFTDP 
Sbjct:   167 KTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERGHSQTYLGCMKKGPVFTDPK 226

Query:   237 LKWYEPQSYLLGKEYFLHAYGPXXXXXXXXXXXXXXXKNNSFRMFSNEDVTIGSWMLAMN 296
             LKWYEP + LLGKEYFLHAYGP               KNNSFRMFSNEDVTIG+WMLAMN
Sbjct:   227 LKWYEPLADLLGKEYFLHAYGPIYALSADVVTSLVALKNNSFRMFSNEDVTIGAWMLAMN 286

Query:   297 VNHEDNRELCQSDCTSSFIAVWDIPKCSG 325
             VNHE+   LC+ +C+   IAVWDIPKCSG
Sbjct:   287 VNHENLHTLCEPECSPYSIAVWDIPKCSG 315
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2009665 AT1G53290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057442 AT2G26100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LKA9B3GTD_ARATH2, ., 4, ., 1, ., -0.70120.94830.9096nono
Q8L7M1B3GTE_ARATH2, ., 4, ., 1, ., -0.69510.95440.9101yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 2e-49
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 7e-48
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 2e-11
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  169 bits (430), Expect = 2e-49
 Identities = 91/243 (37%), Positives = 142/243 (58%), Gaps = 18/243 (7%)

Query: 75  ISGS--QDDDNNNNNNIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEAT 132
           ++GS   +D     ++ KR  +M  VGI T F S  RR S+R TWMP   +  ++LEE  
Sbjct: 119 LNGSPISEDLKKTQSSGKRRYLM-VVGINTAFSSRKRRDSVRATWMPQGEK-RKKLEEEK 176

Query: 133 GLAFRFIIGRTN------DQSKMAELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAY 186
           G+  RF+IG +       D++  AE RK    + DF+ LD  E Y +L  KT  +F  A 
Sbjct: 177 GIIIRFVIGHSATSGGILDRAIEAEDRK----HGDFLRLDHVEGYLELSAKTKTYFATAV 232

Query: 187 ALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYL 246
           A++D++FYVK DDD+++    L   L + R   + Y+GCMK GPV +   ++++EP+ + 
Sbjct: 233 AMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWK 292

Query: 247 LGKE---YFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNR 303
            G+    YF HA G LYA+S D + S +++  +    ++NEDV++GSW + ++V H D+R
Sbjct: 293 FGENGNKYFRHATGQLYAISKD-LASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDR 351

Query: 304 ELC 306
            LC
Sbjct: 352 RLC 354

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.84
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.72
PLN03153 537 hypothetical protein; Provisional 99.36
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.56
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 96.59
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 96.41
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 96.29
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 96.19
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 95.88
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 95.81
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 95.09
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 95.04
PRK11204 420 N-glycosyltransferase; Provisional 94.49
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 94.46
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 94.18
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 93.65
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 93.64
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 93.57
PRK14583 444 hmsR N-glycosyltransferase; Provisional 93.47
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 93.41
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 93.17
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 92.9
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 92.71
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 92.7
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 92.64
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 92.15
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 92.02
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 91.95
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 91.58
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 91.39
COG1215 439 Glycosyltransferases, probably involved in cell wa 90.46
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 90.45
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 89.87
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 89.77
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.68
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 89.43
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 89.03
cd06438183 EpsO_like EpsO protein participates in the methano 88.85
COG1216305 Predicted glycosyltransferases [General function p 87.88
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 87.76
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 86.88
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 86.8
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 85.52
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 84.63
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 84.15
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 80.16
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.5e-59  Score=447.83  Aligned_cols=237  Identities=37%  Similarity=0.671  Sum_probs=208.9

Q ss_pred             CCCCCCeeEEEEEeCCCCCHHHHHHHHHHhccCCccchhhhhccCCcEEEEEeccCC--CHHHHHHHHHHHhhCCCEEEe
Q 020201           88 NIKRHKVMGFVGIQTGFGSGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTN--DQSKMAELRKEVAEYDDFILL  165 (329)
Q Consensus        88 ~~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~l~~l~~~~~i~~~FvvG~~~--~~~~~~~l~~E~~~~~DiI~~  165 (329)
                      ...+++++++|+|+|+++|++||++||+||++.... +.+++...++.++||+|++.  +...+.+|++|+++|+|||++
T Consensus       133 ~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~-~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~l  211 (408)
T PLN03193        133 SSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEK-RKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRL  211 (408)
T ss_pred             CCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCccc-ccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEE
Confidence            455778999999999999999999999999997532 33444567899999999987  456788999999999999999


Q ss_pred             ccccccCCchhHHHHHHHHHhhcCCcceEEEeCCceEEcHHHHHHHHhhcCCCCCceEEeccccccccCCCCCccccccc
Q 020201          166 DIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSY  245 (329)
Q Consensus       166 d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~~Vn~~~L~~~L~~~~~~~~~y~G~~~~~pv~Rd~~~Kwyvs~~~  245 (329)
                      ||.|+|.|||.||+++|+|+.++++++||||+|||+|||+++|..+|+.....+++|+|+++.+|+ |++.++||.+.++
T Consensus       212 DfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPv-r~~~~~ky~epe~  290 (408)
T PLN03193        212 DHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPV-LSQKGVRYHEPEY  290 (408)
T ss_pred             ecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCcc-ccCCCCcCcCccc
Confidence            999999999999999999999999999999999999999999999998876666799999988888 6665555555555


Q ss_pred             c----CCCCCCCCCcCCceeecHHHHHHHHHhhCcCCCCCCcchHHHHHHHHhCCCceeeCCCccc---CCCCCC-----
Q 020201          246 L----LGKEYFLHAYGPLYALSADVVVSLVALKNNSFRMFSNEDVTIGSWMLAMNVNHEDNRELCQ---SDCTSS-----  313 (329)
Q Consensus       246 y----~~~~yp~y~~G~gYvlS~~~v~~l~~~~~~~~~~~~~EDv~iG~~l~~~gV~~~~~~~~~~---~~c~~~-----  313 (329)
                      |    +++.|||||+|+|||||+++|+.|+.. ...++.+.+|||++|.||..++|+++|+++||.   +.|+..     
T Consensus       291 w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n-~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~  369 (408)
T PLN03193        291 WKFGENGNKYFRHATGQLYAISKDLASYISIN-QHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGN  369 (408)
T ss_pred             ccccCccccCCCCCCcceEEehHHHHHHHHhC-hhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCC
Confidence            5    679999999999999999999999864 467888999999999999999999999999997   678743     


Q ss_pred             -eEEEEecCCcccccc
Q 020201          314 -FIAVWDIPKCSGWWL  328 (329)
Q Consensus       314 -~~a~~~~~~~~~~~~  328 (329)
                       -+|+||. ||||+|+
T Consensus       370 ~c~~~~~~-~csg~c~  384 (408)
T PLN03193        370 ICVASFDW-SCSGICR  384 (408)
T ss_pred             eeEEEecc-cCcccCC
Confidence             4999999 9999997

>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 1e-05
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure
 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 10/150 (6%)

Query: 151 ELRKEVAEYDDFILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSL 210
            L++ +  +        E  +  L  K  A F A        ++   DDD Y+ P  L  
Sbjct: 55  RLQERLGPHLVVTQCSAEHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQ 113

Query: 211 LLAKERPHSQTYLGCMKKGPVFTDPHLKWYEPQSYLLGKEYFLHAYGPLYALSADVVVSL 270
           LL         Y+G            L+  +         ++    G  + ++  + + +
Sbjct: 114 LLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKL---VRFWFATGGAGFCINRQLALKM 170

Query: 271 V------ALKNNSFRMFSNEDVTIGSWMLA 294
           V         + S  +   +D T+G  +  
Sbjct: 171 VPWASGSHFVDTSALIRLPDDCTVGYIIEC 200

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.93
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 95.76
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 95.19
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 94.55
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 94.47
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 93.66
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 92.83
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 89.07
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 85.79
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.93  E-value=7.6e-26  Score=211.57  Aligned_cols=191  Identities=18%  Similarity=0.248  Sum_probs=131.1

Q ss_pred             CeeEEEEEeCCCC-CHHHHHHHHHHhccCCccchhhhhccCCcEEEEEeccCCCHHHHHHHHHHHhhCCCEEEecccc--
Q 020201           93 KVMGFVGIQTGFG-SGGRRRSLRMTWMPSDHQGLQQLEEATGLAFRFIIGRTNDQSKMAELRKEVAEYDDFILLDIEE--  169 (329)
Q Consensus        93 ~~~lli~V~S~~~-~~~rR~~IR~TW~~~~~~~l~~l~~~~~i~~~FvvG~~~~~~~~~~l~~E~~~~~DiI~~d~~D--  169 (329)
                      .-+++|+|+|+++ +.+|+.+||+||++..+.           . .||.+...++.    +...  ..+++++.++.+  
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~-~fifsd~~d~~----l~~~--~~~~~~~~~~~~~~   73 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------Q-TFIFTDSPDER----LQER--LGPHLVVTQCSAEH   73 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------G-EEEEESSCCHH----HHHH--HGGGEEECCC----
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------c-eEEEcCCCccc----cccc--ccccceeccccccc
Confidence            4568899999998 567889999999987531           1 34444444433    2222  245788877654  


Q ss_pred             ccCCchhHHHHHHHHHhhcCCcceEEEeCCceEEcHHHHHHHHhhcCCCCCceEEecc-ccccccCCCCCccccccccCC
Q 020201          170 EYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLAKERPHSQTYLGCMK-KGPVFTDPHLKWYEPQSYLLG  248 (329)
Q Consensus       170 ~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~~Vn~~~L~~~L~~~~~~~~~y~G~~~-~~pv~Rd~~~Kwyvs~~~y~~  248 (329)
                      ++.+++.|+...+++.. ..+++|++|+|||+||++++|+++|...++.+++|+|... ..|+ |   .+++++...++.
T Consensus        74 ~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~-~---~~~~~~~~~~~~  148 (280)
T 2j0a_A           74 SHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPI-H---ASELQSKQRTKL  148 (280)
T ss_dssp             ---CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC---------------------
T ss_pred             cccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccc-c---ccccCccccccc
Confidence            67789999999988654 3699999999999999999999999999889999999964 3344 3   134554433333


Q ss_pred             CCCCCCC-cCCceeecHHHHHHHHHhhCcC------CCCCCcchHHHHHHHH-hCCCceeeCCCccc
Q 020201          249 KEYFLHA-YGPLYALSADVVVSLVALKNNS------FRMFSNEDVTIGSWML-AMNVNHEDNRELCQ  307 (329)
Q Consensus       249 ~~yp~y~-~G~gYvlS~~~v~~l~~~~~~~------~~~~~~EDv~iG~~l~-~~gV~~~~~~~~~~  307 (329)
                      ..|+ || +|+||+||++++++|+......      ......||+++|.|++ ++||.+.+.+.|++
T Consensus       149 ~~~~-y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~  214 (280)
T 2j0a_A          149 VRFW-FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS  214 (280)
T ss_dssp             --CC-EECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCC
T ss_pred             cccC-cccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccC
Confidence            3454 66 5789999999999999742111      1233469999999998 99999999999986
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 92.83
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 85.91
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.83  E-value=0.97  Score=38.88  Aligned_cols=157  Identities=12%  Similarity=0.121  Sum_probs=84.2

Q ss_pred             EEEEEeccCCCHHHHHHHHHHHhhCCC-EEEeccccccCCchhHHHHHHHHHhhcCCcceEEEeCCceEEcHHHHHHHHh
Q 020201          135 AFRFIIGRTNDQSKMAELRKEVAEYDD-FILLDIEEEYSKLPYKTLAFFKAAYALYDSEFYVKADDDIYLRPDRLSLLLA  213 (329)
Q Consensus       135 ~~~FvvG~~~~~~~~~~l~~E~~~~~D-iI~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~~Vn~~~L~~~L~  213 (329)
                      .++.|-..+.++.....+++-.+++.+ +.++...++ .+    .-.+.+...+....+|++.+|+|+.+.++.|..++.
T Consensus        56 EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-~G----~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~  130 (328)
T d1xhba2          56 EIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-SG----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLA  130 (328)
T ss_dssp             EEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-CC----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred             EEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-cc----chHHHHHHHHhhhcceeeecCcccccChhHHHHHHH
Confidence            344454444444433444444555555 434433322 11    233556666667899999999999999988877765


Q ss_pred             hcCCC-CCceEEec---cc--------cccccCC-----CCCcc-ccccc-------cCCCCCCCCCcCCceeecHHHHH
Q 020201          214 KERPH-SQTYLGCM---KK--------GPVFTDP-----HLKWY-EPQSY-------LLGKEYFLHAYGPLYALSADVVV  268 (329)
Q Consensus       214 ~~~~~-~~~y~G~~---~~--------~pv~Rd~-----~~Kwy-vs~~~-------y~~~~yp~y~~G~gYvlS~~~v~  268 (329)
                      ....+ ..+.+|.+   ..        .+..+..     ...|. .+..+       +.....-+++.|+++++++++..
T Consensus       131 ~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~  210 (328)
T d1xhba2         131 RIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ  210 (328)
T ss_dssp             HHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHH
T ss_pred             HHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHH
Confidence            43212 12222221   00        0100100     00111 11100       01112235678999999999999


Q ss_pred             HHHHhhCcCCCCCCcchHHHHHHHHhCCC
Q 020201          269 SLVALKNNSFRMFSNEDVTIGSWMLAMNV  297 (329)
Q Consensus       269 ~l~~~~~~~~~~~~~EDv~iG~~l~~~gV  297 (329)
                      .+-.. ...+.....||+-++.=+.+.|-
T Consensus       211 ~vGgf-De~~~~~g~ED~Dl~~R~~~~G~  238 (328)
T d1xhba2         211 EIGTY-DAGMDIWGGENLEISFRIWQCGG  238 (328)
T ss_dssp             HTTSC-CTTSCTTCCCCSHHHHHHHHTTC
T ss_pred             HhCCC-CCCCcCcCchHHHHHHHHHHhCC
Confidence            88544 23344455799999987777774
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure