Citrus Sinensis ID: 020212

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEHHEEHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccccccccHHHHHHHccHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccEEcccc
Coil and Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgSAMTRRGANAAISYMACAVLLVMFNKAalssynfpCANVITLLQMISSCSFLYFLRRWKIINftmgdslmtsdssstfvplktLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAgqkytppvvgsVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIgkssglnsfglmwcngvicgpLLLLWTFLRGdlettinfpyllspGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWilfgglpfdfvsg
Flexible Loop (DISEMBL)
masnsskspmlpvsepargdegekerllkgdeklfrgsAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVEsvrgvnvpmyttLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Low Complexity Region (SEG)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMvvsvesvrgvnvPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Disordered region (IsUnstruct)
******************************************RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV**
Disordered Region (DISOPRED)
********************************************ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGK**GLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Disordered Region (DISEMBL)
************************ERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Disordered Region (DISPRO)
*************************************SAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
Q9NTN3	355	UDP-glucuronic acid/UDP-N	yes	no	0.881	0.816	0.299	2e-28
Q18779	329	UDP-sugar transporter sqv	yes	no	0.775	0.775	0.341	4e-28
Q15B89	343	UDP-N-acetylglucosamine/U	yes	no	0.881	0.845	0.296	5e-28
Q5RDC9	355	UDP-N-acetylglucosamine/U	yes	no	0.881	0.816	0.296	6e-28
A2VE55	355	UDP-N-acetylglucosamine/U	yes	no	0.881	0.816	0.293	3e-27
Q95YI5	373	UDP-sugar transporter UST	yes	no	0.908	0.801	0.279	3e-26
Q54YK1	382	Putative UDP-sugar transp	yes	no	0.860	0.740	0.250	5e-26
Q76EJ3	337	UDP-N-acetylglucosamine/U	no	no	0.793	0.774	0.309	3e-23
Q762D5	326	UDP-N-acetylglucosamine/U	yes	no	0.817	0.825	0.287	1e-21
Q5M8T2	416	Solute carrier family 35	no	no	0.814	0.644	0.273	3e-12

>sp|Q9NTN3|S35D1_HUMAN UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=1 SV=1

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 156/307 (50%), Gaps = 17/307 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGG 321
           G ++FGG
Sbjct: 300 G-MVFGG 305

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP-N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen. May participate in glucuronidation and/or chondroitin sulfate biosynthesis.
Homo sapiens (taxid: 9606)

>sp|Q18779|SQV7_CAEEL UDP-sugar transporter sqv-7 OS=Caenorhabditis elegans GN=sqv-7 PE=1 SV=1

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 148/272 (54%), Gaps = 17/272 (6%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F      
Sbjct: 15  SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP----- 69

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
            + DSS   +P K +    PL + Y   ++  +   + +N+PM+T LRR ++  TMI+E+
Sbjct: 70  -SLDSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
           ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI TA       +   +
Sbjct: 122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLDA 181

Query: 227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAFF 283
             L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F 
Sbjct: 182 KDLGKYGLMFYNCLFMLLPALCVVQY-TGDLDRAYSFMLSDSMTSSVWTCFLLSCICGFV 240

Query: 284 LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLG 315
           LNYS+ L T  NSA+T T  G +K+LF   +G
Sbjct: 241 LNYSLVLCTHHNSALTTTCVGPIKNLFVTYVG 272

Involved in the import of UDP-glucuronic acid (UDP-GlcA), UDP-N-acetylgalactosamine (UDP-GalNAc) and UDP-galactose (UDP-Gal) from the cytoplasm into the Golgi lumen for the biosynthesis of glycoconjugates that play a pivotal role in development.

Caenorhabditis elegans (taxid: 6239)

>sp|Q15B89|S35D2_PIG UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter (Fragment) OS=Sus scrofa GN=SLC35D2 PE=2 SV=1

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 156/307 (50%), Gaps = 17/307 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + DE+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 1   KGEAPAKSSTHRHDEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 60

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 61  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 107

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 108 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 167

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   ++ G
Sbjct: 168 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYITG 227

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 228 DAQKAMDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 287

Query: 315 GWILFGG 321
           G ++FGG
Sbjct: 288 G-MVFGG 293

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Sus scrofa (taxid: 9823)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score =  125 bits (313), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 155/307 (50%), Gaps = 17/307 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDLDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGG 321
           G ++FGG
Sbjct: 300 G-MVFGG 305

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score =  122 bits (307), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 17/307 (5%)

Query: 18  RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
           +G+   K    + +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct: 13  KGEAPAKSSTHRHEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query: 75  NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
             + L QM+++ + L+  +  +++ F   D           VP KT     PL + Y   
Sbjct: 73  LCVGLGQMVATVAVLWVGKALRVVKFPDFDR---------NVPRKTF----PLPLLYFGN 119

Query: 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
            +  + S + +N+PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct: 120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query: 195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG 254
           DL+FD  GY  + + ++ TA   A + +   S  L  +GL++ N +      L   +  G
Sbjct: 180 DLAFDLEGYVFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAIAYFTG 239

Query: 255 DLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
           D +  ++F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    +
Sbjct: 240 DAQKALDFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITYI 299

Query: 315 GWILFGG 321
           G ++FGG
Sbjct: 300 G-MVFGG 305

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q95YI5|US74C_DROME UDP-sugar transporter UST74c OS=Drosophila melanogaster GN=frc PE=1 SV=2

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 23/322 (7%)

Query: 15  EPARGDEGEKERLLKGD------EKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSS 68
           E   G   ++  LL G        +    SA+  +   +A+ Y   + ++ + NK  L+S
Sbjct: 28  EEKMGGSADRSSLLDGSGSKELSHREREDSALFVKKIGSALFYGLSSFMITVVNKTVLTS 87

Query: 69  YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK--TLMHTLP 126
           Y+FP    ++L Q+ +S   L   +R K++NF                PL+  T     P
Sbjct: 88  YHFPSFLFLSLGQLTASIVVLGMGKRLKLVNFP---------------PLQRNTFAKIFP 132

Query: 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIIL 186
           L + +L  M+  +   + +++PM+  LRR ++  TM++E  + G + +  V  SV  +I 
Sbjct: 133 LPLIFLGNMMFGLGGTKTLSLPMFAALRRFSILMTMLLELKILGLRPSNAVQVSVYAMIG 192

Query: 187 GAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLL 246
           GA +A + DLSF+  GY  V + N  TA     + +   +S +  +GLM+ N +      
Sbjct: 193 GALLAASDDLSFNMRGYIYVMITNALTASNGVYVKKKLDTSEIGKYGLMYYNSLFMFLPA 252

Query: 247 LLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNL 306
           L   ++ G+L+  +NF       F+V    SC++ F L+YS  L T  NSA+T TI G L
Sbjct: 253 LALNYVTGNLDQALNFEQWNDSVFVVQFLLSCVMGFILSYSTILCTQFNSALTTTIVGCL 312

Query: 307 KDLFTIGLGWILFGGLPFDFVS 328
           K++    LG  + G   F +++
Sbjct: 313 KNICVTYLGMFIGGDYVFSWLN 334

Involved in the import of UDP-sugars from the cytoplasm into the Golgi lumen.

Drosophila melanogaster (taxid: 7227)

>sp|Q54YK1|Y8631_DICDI Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2

 Score =  118 bits (296), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 167/327 (51%), Gaps = 44/327 (13%)

Query: 20  DEGEKERLLKGDEKLFRGSAMT-------------RRGANA----AISYMAC-------A 55
           D+ EK ++   DE +F+                   RG+N+     I++          A
Sbjct: 48  DDNEKMKI-SEDESIFKSINNDNKNQQNDNIINSFNRGSNSFLFNIINFYKSPRFLSGGA 106

Query: 56  VLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTF 115
           VLL +     +++Y+F  +N +   QM+ +   L+ L+ + I+              +T 
Sbjct: 107 VLLYV-----MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKI------------NTN 149

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
              +T+   +PL+  Y++ +++ ++S++ +N+PMY+ L+R      ++MEYF+  +   P
Sbjct: 150 FEKETIKKLMPLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPP 209

Query: 176 PVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLM 235
            ++ SV ++++GA VAG  DLSF+  GY++V L+ I  A YL  + ++   S ++++ ++
Sbjct: 210 KIIASVVVMVIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKVA--SNMSTYDML 267

Query: 236 WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLN 295
           + N V+  P+ +    +  ++E    F +L    F      S  L FFLN+ IF  T++N
Sbjct: 268 YYNSVLSLPITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVN 327

Query: 296 SAVTQTICGNLKDLFTIGLGWILFGGL 322
           S +T ++ G +K++ +  +G ++F  +
Sbjct: 328 SPLTTSVTGQVKNIASTIIGAMVFNDI 354

May be nvolved in the import of UDP-sugars.

Dictyostelium discoideum (taxid: 44689)

>sp|Q76EJ3|S35D2_HUMAN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Homo sapiens GN=SLC35D2 PE=1 SV=1

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 14/275 (5%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct: 30  SALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 89

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                    +P+K      PL + Y+   +  + S   +++PM+T LR+ T+  T+++E 
Sbjct: 90  ---------IPVKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 136

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G++Y+  ++ SV  IILGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 137 IILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        L+ +   GDL+    F    +  F++    SC L F L Y
Sbjct: 197 KELGKYGVLFYNACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMY 256

Query: 287 SIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
           S  L +  NSA+T  + G +K++    +G IL GG
Sbjct: 257 STVLCSYYNSALTTAVVGAIKNVSVAYIG-ILIGG 290

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Homo sapiens (taxid: 9606)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 13/282 (4%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct: 18  SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDK- 76

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                       K      PL + Y+   +  + S   +++PM+T LR+ T+ FT+++E 
Sbjct: 77  ------------KIPGKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
            + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct: 125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query: 227 SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286
             L  +G+++ N        ++ +   GD +    F +  +  F++    SC+L F L Y
Sbjct: 185 KELGKYGVLFYNACFMLIPTVIISVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLMY 244

Query: 287 SIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS 328
           S  L +  NSA+T  + G +K++    +G ++ G   F  ++
Sbjct: 245 STALCSYYNSALTTAVVGAIKNVSVAYIGMLVGGDYIFSLLN 286

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

>sp|Q5M8T2|S35D3_HUMAN Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 25/293 (8%)

Query: 32  EKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSF--- 88
            +L RG  +   G + AI++   +  L +  K  +S Y F   + +TL+Q ++S +    
Sbjct: 2   RQLCRGRVL---GISVAIAHGVFSGSLNILLKFLISRYQF---SFLTLVQCLTSSTAALS 55

Query: 89  LYFLRRWKIINFT-MGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNV 147
           L  LRR  +I     G SL  + S +    L TL  +L L             S+RG+++
Sbjct: 56  LELLRRLGLIAVPPFGLSL--ARSFAGVAVLSTLQSSLTLW------------SLRGLSL 101

Query: 148 PMYTTLRRTTVAFTMIMEYF-LAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVV 206
           PMY   +R     TM++    L     +P V+ +V +   GA +AGA DL+ D  GY   
Sbjct: 102 PMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTG 161

Query: 207 FLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLL 266
            LA +  A YL  I +    +        +   V   PLL++ +F   D      FP   
Sbjct: 162 VLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWK 221

Query: 267 SPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILF 319
            P  + +     ++   +N++    T +NSAVT +  G +K + TI +G + F
Sbjct: 222 DPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAF 274

May play a role in hemostasis as a regulator of the biosynthesis of platelet-dense granules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
255548892	356	UDP-sugar transporter, putative [Ricinus	0.984	0.910	0.796	1e-151
449437148	353	PREDICTED: UDP-N-acetylglucosamine/UDP-g	0.981	0.915	0.765	1e-144
224089268	354	predicted protein [Populus trichocarpa]	0.990	0.920	0.793	1e-143
225430308	340	PREDICTED: UDP-sugar transporter UST74c	0.960	0.929	0.758	1e-142
363807086	345	uncharacterized protein LOC100819763 [Gl	0.960	0.915	0.756	1e-140
357436995	346	UDP-N-acetylglucosamine/UDP-glucose/GDP-	0.957	0.910	0.754	1e-139
356552517	345	PREDICTED: UDP-glucuronic acid/UDP-N-ace	0.960	0.915	0.746	1e-138
145334197	344	UDP-sugar transporter-like protein [Arab	0.969	0.927	0.730	1e-134
297798730	342	hypothetical protein ARALYDRAFT_491505 [	0.954	0.918	0.722	1e-133
356515388	347	PREDICTED: UDP-glucuronic acid/UDP-N-ace	0.963	0.913	0.738	1e-132

>gi|255548892|ref|XP_002515502.1| UDP-sugar transporter, putative [Ricinus communis] gi|223545446|gb|EEF46951.1| UDP-sugar transporter, putative [Ricinus communis]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/325 (79%), Positives = 297/325 (91%), Gaps = 1/325 (0%)

Query: 1   MASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVM 60
           MASNSS + +LP+S  +  D+ EKERL+KGD+K+FRGSAMT+RGA AAISYM+CAVLLV+
Sbjct: 1   MASNSSNNSILPLST-SPSDDKEKERLIKGDDKIFRGSAMTKRGAYAAISYMSCAVLLVI 59

Query: 61  FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT 120
           FNKAALSS+NFP ANVITL QMISS SFLY LRRW+II+FT+G+S+  SD   TFVP +T
Sbjct: 60  FNKAALSSFNFPSANVITLFQMISSVSFLYALRRWRIISFTVGESVPISDGKPTFVPFET 119

Query: 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGS 180
           LMHTLPL+ AYLLYM+V++ESVRGVNVPMYTTLRRTTVAFTM+MEYFLAGQ+YTPP+VGS
Sbjct: 120 LMHTLPLSAAYLLYMLVTMESVRGVNVPMYTTLRRTTVAFTMVMEYFLAGQRYTPPIVGS 179

Query: 181 VGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV 240
           VG+II GAF+AGARDLSFDF+GYAVVFLANITTAIYLATI+RIG SSGLNSFGLMWCNG+
Sbjct: 180 VGVIIFGAFIAGARDLSFDFYGYAVVFLANITTAIYLATISRIGNSSGLNSFGLMWCNGI 239

Query: 241 ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           +CGP+LL WTF RG+LE TINFPYL +PGF+ VL  SC+LAFFLNYSIFLNTTLNSA+TQ
Sbjct: 240 LCGPVLLFWTFFRGELEMTINFPYLFTPGFMAVLLLSCLLAFFLNYSIFLNTTLNSALTQ 299

Query: 301 TICGNLKDLFTIGLGWILFGGLPFD 325
           TICGNLKDLFTIGLGWI+FGGLPFD
Sbjct: 300 TICGNLKDLFTIGLGWIIFGGLPFD 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437148|ref|XP_004136354.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus] gi|449520181|ref|XP_004167112.1| PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Cucumis sativus]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/329 (76%), Positives = 293/329 (89%), Gaps = 6/329 (1%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNS K+ MLPVS+P  G E EKERL++GDEKLFRGS+MT+RGA AA+SYMACAVLLV+FN
Sbjct: 6   SNSEKNLMLPVSDPPHGTE-EKERLIRGDEKLFRGSSMTKRGAYAALSYMACAVLLVLFN 64

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANV+TL+QM+ SCSFLY LRRWKII+FT+GDS   SD++++ VP+KTL 
Sbjct: 65  KAALSSYNFPSANVVTLVQMVCSCSFLYALRRWKIISFTVGDSF--SDNATSMVPMKTLR 122

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
            T PLA  YLLYM+ ++ESVRGVNVPMYTTLRRTTV FTM++EY LAGQKYT  VVGSVG
Sbjct: 123 QTSPLAGTYLLYMLATMESVRGVNVPMYTTLRRTTVVFTMVVEYLLAGQKYTYSVVGSVG 182

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+LGAF+AGARDLSFD +GY++VF++NITTAIYLATI+RIGKSSGLNSFGLMWCNGV+C
Sbjct: 183 LIVLGAFIAGARDLSFDVYGYSIVFMSNITTAIYLATISRIGKSSGLNSFGLMWCNGVLC 242

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFL---VVLCFSCILAFFLNYSIFLNTTLNSAVT 299
            P+LL WTF+RGDLE TI+FP+L SPGFL   VV+  SC LAFFLNYSIFLNTTLNSAVT
Sbjct: 243 APVLLFWTFIRGDLEATISFPHLFSPGFLVSRVVMFCSCTLAFFLNYSIFLNTTLNSAVT 302

Query: 300 QTICGNLKDLFTIGLGWILFGGLPFDFVS 328
           QTICGNLKDLFTIGLGW++FGGLPFD ++
Sbjct: 303 QTICGNLKDLFTIGLGWMIFGGLPFDLLN 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089268|ref|XP_002308668.1| predicted protein [Populus trichocarpa] gi|222854644|gb|EEE92191.1| predicted protein [Populus trichocarpa]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/330 (79%), Positives = 291/330 (88%), Gaps = 4/330 (1%)

Query: 1   MASNSSKSPMLPVSEPARGDEG--EKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLL 58
           MAS+SS + +LPVS     DE   EKERL+KGDEK FRGS+MT+RGA AAISYM+CAVLL
Sbjct: 1   MASSSSSNSILPVSVSPLDDERQREKERLIKGDEKAFRGSSMTKRGAYAAISYMSCAVLL 60

Query: 59  VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL 118
           V+FNKAALSSYNFP ANVITL QMI SCSFLY LRRW+II+FT G SL TSD ++TFVPL
Sbjct: 61  VLFNKAALSSYNFPSANVITLFQMICSCSFLYALRRWRIISFTDGGSLTTSDVNATFVPL 120

Query: 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV 178
           +TLMHTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTMIMEY LAGQ+YT P+ 
Sbjct: 121 ETLMHTLPLALTYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMIMEYILAGQRYTRPIF 180

Query: 179 GSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIG-KSSGLNSFGLMWC 237
           GSVGLI+LGAF+AGARDLSFDF+GYAVVF AN TTAIYLATI+RIG KSSGLNSFGLMWC
Sbjct: 181 GSVGLIVLGAFIAGARDLSFDFYGYAVVFAANFTTAIYLATISRIGRKSSGLNSFGLMWC 240

Query: 238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL-VVLCFSCILAFFLNYSIFLNTTLNS 296
           NG+ICGP+LL WTF+RGDL  T+NFPYL S GFL  VL  SCILAFFLNYSIFLNTTLNS
Sbjct: 241 NGIICGPVLLFWTFIRGDLGMTMNFPYLFSLGFLQAVLLLSCILAFFLNYSIFLNTTLNS 300

Query: 297 AVTQTICGNLKDLFTIGLGWILFGGLPFDF 326
           A+TQTICGNLKDLFTI LGW +FGGLPFDF
Sbjct: 301 ALTQTICGNLKDLFTIALGWTIFGGLPFDF 330

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430308|ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vitis vinifera]

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/327 (75%), Positives = 287/327 (87%), Gaps = 11/327 (3%)

Query: 2   ASNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMF 61
           +SNSSKSPMLP+S+P R D+           K+F+GSAM++RGA AAISYM+CAVLLV+F
Sbjct: 3   SSNSSKSPMLPISDPPRPDD-----------KVFKGSAMSKRGAYAAISYMSCAVLLVIF 51

Query: 62  NKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121
           NKAALSSY+FPCA+VITL Q+I SCSFLY LRRWKII+FT+G+S   +D S  FVP+ TL
Sbjct: 52  NKAALSSYHFPCASVITLFQIICSCSFLYALRRWKIISFTLGESSNVNDGSPVFVPITTL 111

Query: 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSV 181
           +HTLPLA+ YLLYM+V++ESVRGVNVPMYTTLRRTTV FTM +EY LAGQ+YT  VVGSV
Sbjct: 112 IHTLPLAITYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMFVEYILAGQRYTSSVVGSV 171

Query: 182 GLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVI 241
           GLI+LGAF+AGARDLSFD +GYAVVFL+NITTAIYLATIARIGKSSGLNSFGLMWCNG++
Sbjct: 172 GLIVLGAFIAGARDLSFDSYGYAVVFLSNITTAIYLATIARIGKSSGLNSFGLMWCNGIL 231

Query: 242 CGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQT 301
           CGP+LLLWTF+RGDL   +NFP+   PGFLVVL  SCILAFFLNYSIFLNTTLNSAVTQT
Sbjct: 232 CGPILLLWTFIRGDLGMAMNFPHFFLPGFLVVLLLSCILAFFLNYSIFLNTTLNSAVTQT 291

Query: 302 ICGNLKDLFTIGLGWILFGGLPFDFVS 328
           ICGNLKDLFTIGLGW++FGGLPFD ++
Sbjct: 292 ICGNLKDLFTIGLGWMIFGGLPFDILN 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807086|ref|NP_001242077.1| uncharacterized protein LOC100819763 [Glycine max] gi|255641342|gb|ACU20948.1| unknown [Glycine max]

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/324 (75%), Positives = 285/324 (87%), Gaps = 8/324 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D+KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKSHDA--------DDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ S  FLY LRRW++I+F+ G+SL  SD+S+ FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSRCFLYLLRRWRMISFSTGESLHISDNSTKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDAYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFPYL SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPYLFSPGFIVILLFSCVLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGNLKDLFTIGLGWILFGGLPFDF 326
           CGNLKDLFTIGLGWI+FGGLPFDF
Sbjct: 298 CGNLKDLFTIGLGWIIFGGLPFDF 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357436995|ref|XP_003588773.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula] gi|355477821|gb|AES59024.1| UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Medicago truncatula]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/326 (75%), Positives = 286/326 (87%), Gaps = 11/326 (3%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS+ PMLP+S+P +          + D+KLF+GSAMT+RGA AAISYM+CAVLLVMFN
Sbjct: 6   SNSSEKPMLPLSDPPKN---------QIDDKLFKGSAMTKRGAYAAISYMSCAVLLVMFN 56

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+SSC FLY LRRW+II+FT  +SL+ SD+S+ FV LKTL 
Sbjct: 57  KAALSSYNFPSANVITLLQMVSSCFFLYILRRWRIISFTASESLLISDNSTKFVSLKTLK 116

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HT PLA AYLLYM+V++E+VRGVNVPMYTTLRRTTV FTM++E+ L GQ+YT  VV SVG
Sbjct: 117 HTFPLAGAYLLYMLVTMEAVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTHSVVFSVG 176

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GY+VVFLAN+TTAIYLATIARIGK+SGLNSFGLMWCNG++C
Sbjct: 177 LIVFGAFVAGARDLSFDTYGYSVVFLANVTTAIYLATIARIGKTSGLNSFGLMWCNGILC 236

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVV--LCFSCILAFFLNYSIFLNTTLNSAVTQ 300
           GP+LL+WTF+RGDL+TTI+FPYL SPGFLV   + F CILAFFLNYSIFLNTTLNSA+TQ
Sbjct: 237 GPVLLIWTFIRGDLKTTIDFPYLFSPGFLVCYFVFFLCILAFFLNYSIFLNTTLNSALTQ 296

Query: 301 TICGNLKDLFTIGLGWILFGGLPFDF 326
           TICGN+KDLFTIG GWI+FGGLPFDF
Sbjct: 297 TICGNMKDLFTIGFGWIIFGGLPFDF 322

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552517|ref|XP_003544613.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/324 (74%), Positives = 283/324 (87%), Gaps = 8/324 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFN 62
           SNSS++ MLPVS+P +  +         D KLF+GSAMT+RGA AA+SYM+CAVLLVMFN
Sbjct: 6   SNSSENLMLPVSDPPKTQDA--------DNKLFKGSAMTKRGAFAAVSYMSCAVLLVMFN 57

Query: 63  KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM 122
           KAALSSYNFP ANVITLLQM+ SC FLY LR W++I+F+ G+ L  S++SS FV LKTL 
Sbjct: 58  KAALSSYNFPSANVITLLQMVCSCCFLYLLRCWRMISFSTGEPLHISENSSKFVSLKTLK 117

Query: 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182
           HTLPL+ AYL YM+V++ESVRGVNVPMYTTLRRTTV FTM++E+ L GQ+YTP V+ SVG
Sbjct: 118 HTLPLSGAYLFYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVG 177

Query: 183 LIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVIC 242
           LI+ GAFVAGARDLSFD +GYAVVF++NI TAIYLATIARIGK+SGLNSFGLMWCNG+IC
Sbjct: 178 LIVFGAFVAGARDLSFDGYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIIC 237

Query: 243 GPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302
           GP+LL+WTF+RGDL TTINFP+L SPGF+V+L FSC+LAFFLNY IFLNTTLNSAVTQTI
Sbjct: 238 GPVLLIWTFVRGDLMTTINFPHLFSPGFIVILLFSCMLAFFLNYCIFLNTTLNSAVTQTI 297

Query: 303 CGNLKDLFTIGLGWILFGGLPFDF 326
           CGNLKDLFTIGLGW++FGGLPFDF
Sbjct: 298 CGNLKDLFTIGLGWMIFGGLPFDF 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334197|ref|NP_001078479.1| UDP-sugar transporter-like protein [Arabidopsis thaliana] gi|332660630|gb|AEE86030.1| UDP-sugar transporter-like protein [Arabidopsis thaliana]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/323 (73%), Positives = 282/323 (87%), Gaps = 4/323 (1%)

Query: 7   KSPMLPVSEPARGDEGEKERLLKG-DEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAA 65
            +P+LPVS+P    E + +   KG D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAA
Sbjct: 3   NNPVLPVSDPPLAGENDSDG--KGVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAA 60

Query: 66  LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
           LSSY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + DS+STFVP+KTL HTL
Sbjct: 61  LSSYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDSASTFVPVKTLFHTL 119

Query: 126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLII 185
           PLA+AYLLYM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+
Sbjct: 120 PLAIAYLLYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGIIL 179

Query: 186 LGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPL 245
           LGAF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+
Sbjct: 180 LGAFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPI 239

Query: 246 LLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGN 305
           L++WTF+ GDLE TINFP+LL+PGF+VVL  SC+LAF LNY IFLNTTLNSA+TQTICGN
Sbjct: 240 LMIWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTLNSALTQTICGN 299

Query: 306 LKDLFTIGLGWILFGGLPFDFVS 328
           +KDLFT+GLGW+LFGGLPFD ++
Sbjct: 300 MKDLFTVGLGWMLFGGLPFDLMN 322

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798730|ref|XP_002867249.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata] gi|297313085|gb|EFH43508.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/321 (72%), Positives = 279/321 (86%), Gaps = 7/321 (2%)

Query: 8   SPMLPVSEPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKAALS 67
           +P+LPVS+P    E +       D++LF+GSAMT+RGA AA+SYMACAV+LV+FNKAALS
Sbjct: 7   NPVLPVSDPPLAGENDV------DDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALS 60

Query: 68  SYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127
           SY+FPC NVITL QM+SS  FLY LRR KII+FT  DS  + D++S FVP+KTL HTLPL
Sbjct: 61  SYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSF-SIDNASNFVPVKTLFHTLPL 119

Query: 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILG 187
           ++AYL+YM+ S+ SVRGVNVPMYTTLRRTTVAFTM++EY L GQ+YT  ++GSVG+I+LG
Sbjct: 120 SIAYLMYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGVILLG 179

Query: 188 AFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLL 247
           AF AGARDLSFDF+GY VVFLANI+TA+YLATIAR GKSSGLNSFGLMW NG+ICGP+L+
Sbjct: 180 AFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPILM 239

Query: 248 LWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLK 307
           +WTF+ GDLE TINFP+LLSPGF+VVL  SC+LAFFLNY IFLNTTLNSA+TQTICGN+K
Sbjct: 240 IWTFICGDLEKTINFPHLLSPGFMVVLLCSCVLAFFLNYCIFLNTTLNSALTQTICGNMK 299

Query: 308 DLFTIGLGWILFGGLPFDFVS 328
           DLFT+GLGW+LFGGLPFD ++
Sbjct: 300 DLFTVGLGWMLFGGLPFDLMN 320

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515388|ref|XP_003526382.1| PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max]

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/325 (73%), Positives = 279/325 (85%), Gaps = 8/325 (2%)

Query: 3   SNSSKSPMLPVSEPARGDEGEKERLLKGDE-KLFRGSAMTRRGANAAISYMACAVLLVMF 61
           S SS++ MLPVS+P   ++ ++E LLK D  K F+    TRR   AAISYM+CAVLLV+F
Sbjct: 6   SYSSENLMLPVSDPP--NDEDREWLLKADNYKTFQ----TRR-IYAAISYMSCAVLLVLF 58

Query: 62  NKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121
           NKAALSSY+FP A+VITLLQM+ SC FLY LRRW+II+F  G+S++ SD+S  FVPLKTL
Sbjct: 59  NKAALSSYHFPSASVITLLQMVCSCCFLYVLRRWRIISFIAGESVIMSDNSKGFVPLKTL 118

Query: 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSV 181
            HTLPLA AYLLYM+V++ESVRGVNVPMYTTLRRTTV FTM++EY L GQ+Y+P V+ SV
Sbjct: 119 KHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMLVGQRYSPSVIFSV 178

Query: 182 GLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVI 241
           GLI+ GAFVAGARDLSFD  GYA+VFL+NITTAIYLATIAR+GK+SGLNSFGLMWCNGV 
Sbjct: 179 GLIVFGAFVAGARDLSFDAHGYAIVFLSNITTAIYLATIARVGKTSGLNSFGLMWCNGVT 238

Query: 242 CGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQT 301
           CGP L +WT +RGD++ TIN PYLLSPGF+VVL FSCILAFFLNYSIFLNTTLNSA+ QT
Sbjct: 239 CGPFLFIWTLVRGDVKMTINSPYLLSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALAQT 298

Query: 302 ICGNLKDLFTIGLGWILFGGLPFDF 326
           ICGNLKDLFTIG GWI+FGGLPFDF
Sbjct: 299 ICGNLKDLFTIGFGWIIFGGLPFDF 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
WB|WBGene00005025	329	sqv-7 [Caenorhabditis elegans	0.811	0.811	0.339	2.6e-31
UNIPROTKB|F1PQY1	349	SLC35D2 "Uncharacterized prote	0.790	0.744	0.317	7.1e-29
ZFIN|ZDB-GENE-040826-5	336	slc35d1a "solute carrier famil	0.793	0.776	0.324	9.1e-29
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.796	0.834	0.325	1.5e-28
ZFIN|ZDB-GENE-040426-1213	363	slc35d1b "solute carrier famil	0.790	0.716	0.315	3.9e-28
UNIPROTKB|Q9NTN3	355	SLC35D1 "UDP-glucuronic acid/U	0.878	0.814	0.295	6.4e-28
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.735	0.633	0.275	1.7e-27
UNIPROTKB|Q76EJ3	337	SLC35D2 "UDP-N-acetylglucosami	0.790	0.771	0.307	1.7e-27
MGI|MGI:1917734	326	Slc35d2 "solute carrier family	0.814	0.822	0.289	1.7e-27
UNIPROTKB|E1BM02	338	SLC35D2 "UDP-N-acetylglucosami	0.790	0.769	0.315	2.2e-27

WB|WBGene00005025 sqv-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 97/286 (33%), Positives = 151/286 (52%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y   +VL+V  NK  L++Y FP    + + QM+++   L+F + ++I+ F    SL
Sbjct:    15 SAVFYGVISVLIVFVNKILLTNYKFPSFLFVGVGQMMATILILFFAKMFRIVQFP---SL 71

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                DSS   +P K +    PL + Y   +            PM+T LRR ++  TMI+E+
Sbjct:    72 ---DSS---IPRKIM----PLPLLYFFNLISGLGGTQMINLPMFTVLRRFSILMTMILEF 121

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANI-TTAIYLATIARIGK 225
             ++   K +  V  SVGL+I G+F+A   DLSFD  GY ++F+ NI T A+ + T  ++  
Sbjct:   122 YILNVKASKAVKISVGLMIGGSFIAAIYDLSFDALGYTMIFINNICTAALGVYTKQKLD- 180

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF--SCILAF 282
             +  L  +GLM+ N + +  P L +  +  GDL+   +F    S    V  CF  SCI  F
Sbjct:   181 AKDLGKYGLMFYNCLFMLLPALCVVQYT-GDLDRAYSFMLSDSMTSSVWTCFLLSCICGF 239

Query:   283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS 328
              LNYS+ L T  NSA+T T  G +K+LF   +G    G   F + +
Sbjct:   240 VLNYSLVLCTHHNSALTTTCVGPIKNLFVTYVGMFSSGDYVFQWAN 285

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1PQY1 SLC35D2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 88/277 (31%), Positives = 143/277 (51%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y AC+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct:    40 SALFYGACSFLIVLVNKALLTAYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 99

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P+K L    PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:   100 ---------IPVKKLF---PLPLLYIGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 147

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIY-LATIARIGK 225
              + G++Y+  ++ SV  IILGAF+A   DL+F   GY  VFL +I TA   + T  ++G 
Sbjct:   148 IILGKQYSLNIIASVFTIILGAFIAAGSDLAFYLEGYIFVFLNDIFTAANGVYTKQKMGP 207

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
                L  +G+++ N   +  P L++ +   GDL     F    +  F++    SC L F L
Sbjct:   208 KE-LGKYGVLFYNACFMIIPTLII-SVSTGDLRQATEFNEWKNVLFIIQFLLSCFLGFLL 265

Query:   285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
              YS+ L +  NSA+T  + G +K++    +G +L GG
Sbjct:   266 MYSMVLCSYYNSALTTAVVGAIKNVSIAYIG-MLVGG 301

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040826-5 slc35d1a "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1a" [Danio rerio (taxid:7955)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 90/277 (32%), Positives = 143/277 (51%)

Query:    46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDS 105
             +AA  Y   + L+V+ NK+ L++Y FP +  + + QM+++   L   +  ++I F     
Sbjct:    25 SAAGFYGISSFLIVVVNKSVLTNYRFPSSICVGIGQMLATVVVLRVGKALRVITFP---- 80

Query:   106 LMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIME 165
                 D S   +P KT     PL + Y+               PM+T LRR ++ FTM+ E
Sbjct:    81 --EFDGS---IPRKTF----PLPLLYVGNQITGLFGTKRLNLPMFTVLRRFSILFTMLAE 131

Query:   166 YFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGK 225
              FL  +K++ PV  +V  +ILGAFVA + DL+FD  GY  + + ++ TA   A + +   
Sbjct:   132 GFLLKKKFSRPVQLTVFTMILGAFVAASADLAFDLQGYVFILMNDVLTAANGAFVKQKLD 191

Query:   226 SSGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFL 284
             S  L  +GL++ N + +  P LLL   + GD++   ++       F+     SCI+ F L
Sbjct:   192 SKELGKYGLLYYNALFMILPTLLL-AHVTGDMDKAFDYDGWSDVLFISQFFLSCIMGFIL 250

Query:   285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
              YS  L T  NSA+T TI G LK++    +G + FGG
Sbjct:   251 MYSTVLCTQYNSALTTTIVGCLKNILVTYIGMV-FGG 286

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 91/280 (32%), Positives = 141/280 (50%)

Query:    43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTM 102
             +G   A++Y   +V +  FNKA L+ Y F  +N +TL QMI S  FL  ++ +  I++  
Sbjct:    12 KGFFVAVAYGVTSVSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYP- 70

Query:   103 GDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTM 162
                    D +     L        L++ ++L +            P+++ LRR +    +
Sbjct:    71 -------DFN-----LDLCKKLASLSLLFILMVISGLAALAKTNVPLFSALRRLSTLIVI 118

Query:   163 IMEYFLAGQKYTPP-VVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIA 221
             + E FL G K TP   V SV +++LGA +AG  D +FDF G   +      TA YL  IA
Sbjct:   119 VGEGFLLG-KVTPTDEVQSVVVMVLGALIAGLGDATFDFVGSIYILFNCFVTAGYLIYIA 177

Query:   222 RIGKSSGLNSFGLM-WCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280
             +  K + LN+FGLM +CN ++  P  ++ TF+  + E    F    + GF      S I 
Sbjct:   178 KKTKETQLNTFGLMFYCN-ILSLPATIILTFIT-EWEGISTFEGYGNIGFQFCFFMSSIQ 235

Query:   281 AFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFG 320
             AF LNY IFL +T+NS +T +I G +K +    +G  +FG
Sbjct:   236 AFLLNYFIFLCSTMNSPLTTSITGQIKSILQTIIGLFMFG 275

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1213 slc35d1b "solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1b" [Danio rerio (taxid:7955)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 87/276 (31%), Positives = 141/276 (51%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             AA  Y   + L+V+ NK+ L++Y FP +  + + QM ++   +  LR  K +N      +
Sbjct:    37 AAAFYGISSFLIVVVNKSVLTNYRFPSSLALGIGQMFAT---VVVLRGAKALN------M 87

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
             ++       V  K      PL + Y+               PM+T LRR ++ FTM+ E 
Sbjct:    88 ISFPDFDWHVAYKVF----PLPLLYVGNQLTGLFGTKQLNLPMFTVLRRFSILFTMLFEG 143

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
             +L  QK++  +  +V  +ILGAFVA + DL+FD  GY  + L NI TA   A + +   S
Sbjct:   144 YLLKQKFSWSIKATVFTMILGAFVAASSDLAFDLQGYVFITLNNILTAANGAYMKQKLDS 203

Query:   227 SGLNSFGLMWCNGVICG-PLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +GL++ N ++   P ++L  +  GD++ T+         F++    SC++ F L 
Sbjct:   204 KELGKYGLLYYNALLMIIPTVVL-AYFTGDVQKTLECEVWADYFFVIQFVLSCVMGFILM 262

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
             YSI L T  NSA+T TI G +K++    +G + FGG
Sbjct:   263 YSIMLCTHYNSALTTTIVGCIKNILVTYIGMV-FGG 297

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NTN3 SLC35D1 "UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter" [Homo sapiens (taxid:9606)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 91/308 (29%), Positives = 152/308 (49%)

Query:    18 RGDEGEKERLLKGDEKLFRGSAMTRR---GANAAISYMACAVLLVMFNKAALSSYNFPCA 74
             +G+   K   L+ +E+L   SA T        AA  Y   + L+V+ NK+ L++Y FP +
Sbjct:    13 KGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVNKSVLTNYRFPSS 72

Query:    75 NVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134
               + L QM+++ + L+  +  +++ F         D +   VP KT     PL + Y   
Sbjct:    73 LCVGLGQMVATVAVLWVGKALRVVKFP------DLDRN---VPRKTF----PLPLLYFGN 119

Query:   135 MXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194
                          PM+T LRR ++ FTM  E  L  + ++  +  +V  +I+GAFVA + 
Sbjct:   120 QITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASS 179

Query:   195 DLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGV-ICGPLLLLWTFLR 253
             DL+FD  GYA + + ++ TA   A + +   S  L  +GL++ N + +  P L +  +  
Sbjct:   180 DLAFDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMILPTLAI-AYFT 238

Query:   254 GDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIG 313
             GD +  + F       FL+    SC++ F L Y+  L T  NSA+T TI G +K++    
Sbjct:   239 GDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIVGCIKNILITY 298

Query:   314 LGWILFGG 321
             +G + FGG
Sbjct:   299 IGMV-FGG 305

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0048706 "embryonic skeletal system development" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005463 "UDP-N-acetylgalactosamine transmembrane transporter activity" evidence=NAS

GO:0015789 "UDP-N-acetylgalactosamine transport" evidence=NAS

GO:0005461 "UDP-glucuronic acid transmembrane transporter activity" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006065 "UDP-glucuronate biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0015787 "UDP-glucuronic acid transport" evidence=TAS

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 71/258 (27%), Positives = 138/258 (53%)

Query:    66 LSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTL 125
             +++Y+F  +N +   QM+ +   L+ L+ + I+         T+    T   +K LM   
Sbjct:   112 MTTYDFSASNFLLFNQMVVTIVILHILKHFNILKIN------TNFEKET---IKKLM--- 159

Query:   126 PLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEYFLAGQKYTPP-VVGSVGLI 184
             PL+  Y++ +            PMY+ L+R      ++MEYF+  +K +PP ++ SV ++
Sbjct:   160 PLSFCYIINVLLGLDSLKQLNIPMYSALKRLVAVVILVMEYFIL-KKVSPPKIIASVVVM 218

Query:   185 ILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGP 244
             ++GA VAG  DLSF+  GY++V L+ I  A YL  + ++  +S ++++ +++ N V+  P
Sbjct:   219 VIGAVVAGITDLSFNSLGYSLVLLSCIFQASYLIYVKKV--ASNMSTYDMLYYNSVLSLP 276

Query:   245 LLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICG 304
             + +    +  ++E    F +L    F      S  L FFLN+ IF  T++NS +T ++ G
Sbjct:   277 ITIFLMIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTG 336

Query:   305 NLKDLFTIGLGWILFGGL 322
              +K++ +  +G ++F  +
Sbjct:   337 QVKNIASTIIGAMVFNDI 354

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q76EJ3 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 85/276 (30%), Positives = 138/276 (50%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP    + + QM ++   LY  +  KII+F   D  
Sbjct:    30 SALFYGTCSFLIVLVNKALLTTYGFPSPIFLGIGQMAATIMILYVSKLNKIIHFPDFDKK 89

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P+K      PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:    90 ---------IPVKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLET 136

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G++Y+  ++ SV  IILGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct:   137 IILGKQYSLNIILSVFAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P L++ +   GDL+    F    +  F++    SC L F L 
Sbjct:   197 KELGKYGVLFYNACFMIIPTLII-SVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLM 255

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
             YS  L +  NSA+T  + G +K++    +G IL GG
Sbjct:   256 YSTVLCSYYNSALTTAVVGAIKNVSVAYIG-ILIGG 290

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

MGI|MGI:1917734 Slc35d2 "solute carrier family 35, member D2" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 82/283 (28%), Positives = 141/283 (49%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ L+V+ NKA L++Y FP   V+ + QM ++   LY  +  KII+F   D  
Sbjct:    18 SALFYGTCSFLIVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDFDKK 77

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+ FT+++E 
Sbjct:    78 ---------IPGKLF----PLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEA 124

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G +Y+  ++ SV  I+LGAF+A   DL+F+  GY  VFL +I TA       +    
Sbjct:   125 IILGTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYTKQKMDP 184

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P +++ +   GD +    F +  +  F++    SC+L F L 
Sbjct:   185 KELGKYGVLFYNACFMLIPTVII-SVSTGDFQQATEFRHWKNVLFIIQFLLSCLLGFLLM 243

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS 328
             YS  L +  NSA+T  + G +K++    +G ++ G   F  ++
Sbjct:   244 YSTALCSYYNSALTTAVVGAIKNVSVAYIGMLVGGDYIFSLLN 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BM02 SLC35D2 "UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 87/276 (31%), Positives = 136/276 (49%)

Query:    47 AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
             +A+ Y  C+ LLV+ NKA L++Y FP   V+ + QM  +   LY  +  KII+F   D  
Sbjct:    30 SALFYGTCSFLLVLINKALLTTYRFPSPIVLGVGQMAVTIMILYVSKLNKIIHFPDFDKK 89

Query:   107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMXXXXXXXXXXXXPMYTTLRRTTVAFTMIMEY 166
                      +P K      PL + Y+               PM+T LR+ T+  T+++E 
Sbjct:    90 ---------IPTKLF----PLPLLYVGNHISGLASTSKLSLPMFTVLRKFTIPLTLLLET 136

Query:   167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYAVVFLANITTAIYLATIARIGKS 226
              + G++Y+  ++ SV  IILGAFVA   DL+F+  GY  VFL +I TA       +    
Sbjct:   137 IILGKQYSLNIIVSVFAIILGAFVAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDP 196

Query:   227 SGLNSFGLMWCNGV-ICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLN 285
               L  +G+++ N   +  P L++ +   GDL     F    +  F++    SC L F L 
Sbjct:   197 KELGKYGVLFYNACFMIIPTLII-SVSTGDLRQATEFNQWKNVLFIIQFLLSCFLGFLLM 255

Query:   286 YSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG 321
             YS  L +  NSA+T  + G +K++    +G +L GG
Sbjct:   256 YSTVLCSYYNSALTTAVVGAIKNVSVAYIG-MLVGG 290

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032667001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (340 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	329
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	2e-10
pfam08449	303	pfam08449, UAA, UAA transporter family	5e-07
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	6e-07

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 62/289 (21%), Positives = 126/289 (43%), Gaps = 25/289 (8%)

Query: 47  AAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSL 106
           A++SY   ++L+ + NK  LS+  F    ++  +Q +     L  L+  +++ F +  + 
Sbjct: 10  ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKA- 68

Query: 107 MTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY 166
                              P++   ++ +  S +S++ + VP+YT  +  T+      E 
Sbjct: 69  ---------------KKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEV 113

Query: 167 FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF-------GYAVVFLANITTAIYLAT 219
              G + T   + S  L++L + VA   D     F       GY  +F   +++A ++  
Sbjct: 114 LFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLI 173

Query: 220 IARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279
           + +  K +    F  M+ N ++  P+LL ++FL  D  +  N    LS   L+ +  S +
Sbjct: 174 MRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGL 232

Query: 280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS 328
            +  ++Y       + S+ T ++ G L  L  I L  ++F   P +F+S
Sbjct: 233 CSVGISYCSAWCVRVTSSTTYSMVGALNKL-PIALAGLVFFDAPVNFLS 280

Length = 309

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 14/216 (6%)

Query: 116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTP 175
           +PLKT +    +   + L  V++ E+++ ++ P +   +   +   MI+   + G++Y+ 
Sbjct: 62  IPLKTYVL---IVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSS 118

Query: 176 PVVGSVGLIILGAFVA---------GARDLSF-DFFGYAVVFLANITTAIYLATIARIGK 225
               S  LI LG  +           ++  +F D  G A++F A +  A+   T  ++ K
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 226 SSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS-PGFLVVLCFSCILAFFL 284
             G +S  +M+ + ++  P  LL               + L  P  L  L  + +  +  
Sbjct: 179 KYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVG 238

Query: 285 NYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFG 320
            + +F   +   A+T T+   L+   ++ L  +LFG
Sbjct: 239 QFFVFYLISEFGALTVTLVTTLRKFVSLLLSVLLFG 274

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 47.9 bits (115), Expect = 6e-07
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 7/126 (5%)

Query: 202 GYAVVFLANITTAIYLATIARI---GKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLET 258
           G+ +   A+   A+ L    ++    K + LN   L++    +   +LL         + 
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 259 TINFPY----LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGL 314
                     L +  ++++L  S +LAF  N S F      S +T ++ G +K +  I L
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 315 GWILFG 320
             I+FG
Sbjct: 121 SVIIFG 126

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.96
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.94
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.93
PLN00411	358	nodulin MtN21 family protein; Provisional	99.91
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.91
PRK11272	292	putative DMT superfamily transporter inner membran	99.9
PRK15430	296	putative chloramphenical resistance permease RarD;	99.9
PRK11689	295	aromatic amino acid exporter; Provisional	99.89
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.89
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.88
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.85
KOG1580	337	consensus UDP-galactose transporter related protei	99.83
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.82
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.78
KOG1581	327	consensus UDP-galactose transporter related protei	99.76
KOG1582	367	consensus UDP-galactose transporter related protei	99.75
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.69
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.68
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.67
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.66
KOG2765	416	consensus Predicted membrane protein [Function unk	99.62
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.59
COG2962	293	RarD Predicted permeases [General function predict	99.56
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.49
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.46
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.44
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.01
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.95
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.93
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.88
COG2510	140	Predicted membrane protein [Function unknown]	98.87
KOG2766	336	consensus Predicted membrane protein [Function unk	98.82
COG2510	140	Predicted membrane protein [Function unknown]	98.74
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.67
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.5
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.45
PRK15430	296	putative chloramphenical resistance permease RarD;	98.31
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.27
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.2
PLN00411	358	nodulin MtN21 family protein; Provisional	98.15
PRK11272	292	putative DMT superfamily transporter inner membran	98.15
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.1
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.09
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.06
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.03
PRK11689	295	aromatic amino acid exporter; Provisional	98.03
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.86
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.72
PRK13499	345	rhamnose-proton symporter; Provisional	97.65
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.59
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.45
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.41
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.41
COG2962	293	RarD Predicted permeases [General function predict	97.37
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.35
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.34
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.32
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.2
PRK11431	105	multidrug efflux system protein; Provisional	97.15
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.13
COG2076	106	EmrE Membrane transporters of cations and cationic	97.1
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.69
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.58
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.41
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.11
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.08
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.04
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.99
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.55
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.25
KOG1581	327	consensus UDP-galactose transporter related protei	94.06
PRK13499	345	rhamnose-proton symporter; Provisional	93.63
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	93.13
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.09
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	92.7
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	91.41
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	90.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.66
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	89.38
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	88.66
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	85.91
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	81.82
KOG2765	416	consensus Predicted membrane protein [Function unk	80.75
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	80.75

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2.6e-35  Score=274.68  Aligned_cols=275  Identities=17%  Similarity=0.163  Sum_probs=227.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHH
Q 020212           40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK  119 (329)
Q Consensus        40 ~~~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (329)
                      .+.+..+.++.|+++|+..++.||++++..  |+|++++++|++++++++.++...+..+.|+           ....++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~--~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~  112 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTISSLQLFVGWLFALLYWATGFRKIPR-----------IKSLKL  112 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----------CCCHHH
Confidence            456778999999999999999999999964  7899999999999988776665544322111           001245


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccc
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD  199 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~  199 (329)
                      ++++++|.|+++.......+.|++++++++++++|++.|+++++++++++|||++++++.+++++++|+.++..+|.+++
T Consensus       113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~  192 (350)
T PTZ00343        113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT  192 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhH
Confidence            88999999999887777889999999999999999999999999999999999999999999999999999888888899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcCC-----CCChhhHHHHHHHHHHHHHHHHHHHhcc--hhhhhc-----CCCCcc
Q 020212          200 FFGYAVVFLANITTAIYLATIARIGKSS-----GLNSFGLMWCNGVICGPLLLLWTFLRGD--LETTIN-----FPYLLS  267 (329)
Q Consensus       200 ~~G~~~~l~s~~~~A~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~~~~-----~~~~~~  267 (329)
                      ..|++++++|++++|+|+++.|+..++.     +.++.++..|+.+.+.++++|+....+.  +...+.     ...+..
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            9999999999999999999999988753     3567777777888999888887664432  111111     111111


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       268 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ...+..++.+++..+..|.+.|.+++++||.++++.+++||++++++|+++||| ++++.+
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge-~lt~~~  332 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQT-QVTLLG  332 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCC-CCchHh
Confidence            233456677888999999999999999999999999999999999999999997 998765

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=3.7e-35  Score=258.91  Aligned_cols=275  Identities=33%  Similarity=0.557  Sum_probs=253.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHH
Q 020212           41 TRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT  120 (329)
Q Consensus        41 ~~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (329)
                      +.+....++.|+.+|+.++++||++++.|+||...++...|...+.+.+..+.+.|.+++|+             .++++
T Consensus        10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~-------------l~~~~   76 (314)
T KOG1444|consen   10 QSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRP-------------LDLRT   76 (314)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCC-------------cChHH
Confidence            45668999999999999999999999999888877777799999999999999998887653             56789


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccch
Q 020212          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDF  200 (329)
Q Consensus       121 ~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~  200 (329)
                      .|+++|.++++.++++++..+++|+|++.++++|+.+|+++++.+..++|.+++...+.++..+.+|...+...|.+++.
T Consensus        77 ~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~  156 (314)
T KOG1444|consen   77 AKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNL  156 (314)
T ss_pred             HHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998899999998


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhh-hcCCCCcchHHHHHHHHHHH
Q 020212          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI  279 (329)
Q Consensus       201 ~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~l~~~~~  279 (329)
                      .|+.|++.+.++.+.+.++.|+..+..+.+.+++++|+++++.+.++...+++||+... .+.+.+.+..++..+.++|+
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            89999999999999999999999988889999999999999999999999999998722 24455777888999999999


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccCC
Q 020212          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG  329 (329)
Q Consensus       280 ~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~~  329 (329)
                      ++++.+++.+++.+.+||++.+++| .+....+.++.+++|+.|++|.|.
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~  285 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNV  285 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhh
Confidence            9999999999999999999999999 888888888888888899999863

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-35  Score=267.31  Aligned_cols=273  Identities=26%  Similarity=0.414  Sum_probs=236.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      .+....+..|++++++..+.||++++.++|++|++++..|+.++.+.....+.++..+.++            ..++..+
T Consensus        16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~------------~~~~~~~   83 (316)
T KOG1441|consen   16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK------------ISSKLPL   83 (316)
T ss_pred             HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc------------cccccch
Confidence            4557889999999999999999999989999999999999999999888888877544221            1133567


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccchh
Q 020212          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF  201 (329)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~  201 (329)
                      +.++|+|++++++.+++|.|++|+++|++|++|+++|+++.++++++.+|+++++.+++++++..||.+++.+|.++|..
T Consensus        84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~  163 (316)
T KOG1441|consen   84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLF  163 (316)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh--cCCCCChhhHHHHHHHHHHHHHH-HHHHHh-cchhhhhcCCCCcchHHHHHHHHH
Q 020212          202 GYAVVFLANITTAIYLATIARIG--KSSGLNSFGLMWCNGVICGPLLL-LWTFLR-GDLETTINFPYLLSPGFLVVLCFS  277 (329)
Q Consensus       202 G~~~~l~s~~~~A~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~~  277 (329)
                      |++.++++.+..+.++++.|+++  ++++.|+.++++|+.+.+...++ |+.... ++.. .......++..++..++.+
T Consensus       164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s  242 (316)
T KOG1441|consen  164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS  242 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH
Confidence            99999999999999999999999  46689999999999999999988 776443 3222 1111112333344444444


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccCC
Q 020212          278 CILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVSG  329 (329)
Q Consensus       278 ~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~~  329 (329)
                       ++++.+|.+.|++++++||+|++|.+++|++..+..||++|+| |+|+.|.
T Consensus       243 -v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~-pvt~~n~  292 (316)
T KOG1441|consen  243 -VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGN-PVTFLNA  292 (316)
T ss_pred             -HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecC-CCchhhH
Confidence             9999999999999999999999999999999999999999998 9999873

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=2.2e-33  Score=257.40  Aligned_cols=270  Identities=18%  Similarity=0.192  Sum_probs=219.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      +..+.++.|+++|++.++.||+++++  +++|.++++.|+.++.+.+.+....+..+             +.+.++++++
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~   66 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPK-------------RLKISSALLK   66 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCC-------------CCCCCHHHHH
Confidence            34678999999999999999999985  58899999999999887776664332211             1124578999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccchhh
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G  202 (329)
                      ++++.|++++.++.++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++..|
T Consensus        67 ~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G  146 (302)
T TIGR00817        67 LLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAG  146 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999988776777778889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhh-cCCC----CcchHHHHHHHHH
Q 020212          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPY----LLSPGFLVVLCFS  277 (329)
Q Consensus       203 ~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~----~~~~~~~~~l~~~  277 (329)
                      +++++++++++|+|.++.||..++.++|+.+++.|++..+.+.++|.....++..... +...    ......+...+..
T Consensus       147 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (302)
T TIGR00817       147 FLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA  226 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH
Confidence            9999999999999999999987755679999999999999988888876555422111 1000    0111222223333


Q ss_pred             HH-HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          278 CI-LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       278 ~~-~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      +. +....|...+.+++++||+++++.+++||+.++++|++++|| ++++.+
T Consensus       227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge-~lt~~~  277 (302)
T TIGR00817       227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGT-KISPQQ  277 (302)
T ss_pred             HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCC-CCchhH
Confidence            33 344455666789999999999999999999999999999998 888764

specificities overlap.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.8e-31  Score=228.68  Aligned_cols=270  Identities=24%  Similarity=0.305  Sum_probs=241.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHc-----cccccccCCCCccCCCCCc
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSS--YNFPCANVITLLQMISSCSFLYFLRRW-----KIINFTMGDSLMTSDSSST  114 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~--~~f~~p~~l~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  114 (329)
                      ++.......|.++++++.+.||++++.  ...+.|.+++++|.+++..++..+.+.     +..++|+.           
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~-----------   95 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSL-----------   95 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcc-----------
Confidence            345677788999999999999999985  245679999999999999888877553     12233321           


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheecc
Q 020212          115 FVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR  194 (329)
Q Consensus       115 ~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~  194 (329)
                      ..+.+..++++|+++.+.+++.++|.+++|+++++|++-|+++.+|+.++.++++|||.+.....++++++.|..+....
T Consensus        96 ~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdq  175 (347)
T KOG1442|consen   96 QLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQ  175 (347)
T ss_pred             cccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccc
Confidence            25668889999999999999999999999999999999999999999999999999999999999999999999887655


Q ss_pred             C---cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHH
Q 020212          195 D---LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL  271 (329)
Q Consensus       195 ~---~~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~  271 (329)
                      |   ..+++.|.++++.++++.|+..++.||.....+.--+.+++|++..+.+..+|...+.||+...+.++..++..||
T Consensus       176 E~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw  255 (347)
T KOG1442|consen  176 EGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFW  255 (347)
T ss_pred             ccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHH
Confidence            5   4678999999999999999999999999887777789999999999999999999999999988888888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCc
Q 020212          272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGL  322 (329)
Q Consensus       272 ~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~  322 (329)
                      ..+.++|++||..++.+.+-+|.+||+|+.+.+..|.+.+.++++.+++|.
T Consensus       256 ~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~  306 (347)
T KOG1442|consen  256 ILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSET  306 (347)
T ss_pred             HHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999983

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.96  E-value=1.1e-28  Score=205.87  Aligned_cols=267  Identities=22%  Similarity=0.352  Sum_probs=237.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      ..+...++.|+..|+.+++.|||+++..||+....+.+.|..++.+.+.++...|..++|                .++.
T Consensus         5 ~s~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----------------~t~a   68 (309)
T COG5070           5 VSELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----------------LTKA   68 (309)
T ss_pred             cccchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----------------hhhh
Confidence            355788999999999999999999999999999999999999998888888887766643                2567


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc-----
Q 020212          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-----  196 (329)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~-----  196 (329)
                      |.++|.+++...+++.+..++||.+++.|++.|+++.+.++..+..++|.|.+-.+..+.++.++.-+.+.++|.     
T Consensus        69 K~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~  148 (309)
T COG5070          69 KKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF  148 (309)
T ss_pred             hhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH
Confidence            889999999999999999999999999999999999999999999999999999999999999999988888887     


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHH
Q 020212          197 ---SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVV  273 (329)
Q Consensus       197 ---~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~  273 (329)
                         ..| .|++|.....+..|.+...+|+..+-.+...++.++|+++++.++++.+++..+||.+. +............
T Consensus       149 ~~~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~a  226 (309)
T COG5070         149 KAQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMA  226 (309)
T ss_pred             HhcccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHH
Confidence               345 59999999999999999999998877778889999999999999999999988998542 2222223344567


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          274 LCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       274 l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +..+|++++...++.-|+++.+|.+++|++|.+++....+.|.++||| |.++.
T Consensus       227 m~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffda-p~nf~  279 (309)
T COG5070         227 MFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDA-PVNFL  279 (309)
T ss_pred             HHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCC-chhHH
Confidence            889999999999999999999999999999999999999999999997 98865

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.94  E-value=5.7e-25  Score=201.69  Aligned_cols=252  Identities=22%  Similarity=0.326  Sum_probs=209.8

Q ss_pred             HHHHHHhh-cCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHHh
Q 020212           60 MFNKAALS-SYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVS  138 (329)
Q Consensus        60 ~~nK~il~-~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  138 (329)
                      +..+.+.. .++.++|.++++.|+.++.+.........+.+ +              .+++.++++++.++++.++..++
T Consensus        17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen   17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-K--------------SRKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-C--------------CCcChHHHHHHHHHHHHHHHHHH
Confidence            34455554 44334799999999999988777665543311 0              11234677899999999999999


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcc----cc------hhhHHHHHH
Q 020212          139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS----FD------FFGYAVVFL  208 (329)
Q Consensus       139 ~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~----~~------~~G~~~~l~  208 (329)
                      |.|++|+|.|.++++|++.|+++++++++++|||++++++++++++++|+.+...+|.+    .+      ..|+++.++
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~  161 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLL  161 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999987554421    11      239999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHH--hcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHH
Q 020212          209 ANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY  286 (329)
Q Consensus       209 s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  286 (329)
                      +.++.|.+.++.||+.++++.++.++++|+++++.+...+....  +||+.+..++.. .++..+..++..++.+...+.
T Consensus       162 sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~  240 (303)
T PF08449_consen  162 SLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQF  240 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999889999999999999999998888777  778765544332 345567888888888988888


Q ss_pred             HHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          287 SIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       287 ~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ..+..+++.||++.+++..+|++.++++|+++||+ ++++.+
T Consensus       241 ~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~-~~~~~~  281 (303)
T PF08449_consen  241 FIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGH-PLSPLQ  281 (303)
T ss_pred             HHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCC-cCChHH
Confidence            88899999999999999999999999999999997 998764

; GO: 0055085 transmembrane transport

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.93  E-value=6.9e-25  Score=191.35  Aligned_cols=272  Identities=19%  Similarity=0.248  Sum_probs=226.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccH-HHHHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL-KTLMH  123 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  123 (329)
                      +..++.|+++|+++.+++|+.-.+  |++|++++.+|+++-.++.....+..+.+.++         .+...+| ..+|+
T Consensus        18 L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r---------~r~~~sw~~~Lr~   86 (349)
T KOG1443|consen   18 LALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR---------ARVVLSWRDYLRR   86 (349)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCc---------cccCCcHHHHHHH
Confidence            556699999999999999998765  57789999999999888877776654433221         1223566 46678


Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccchhhH
Q 020212          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGY  203 (329)
Q Consensus       124 ~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~  203 (329)
                      +.|.++.-++.+.++|++++|++++.|++.|+.+++|+.+++.++.-||++|.-.+.++++.+|+++.++.+.++|..|+
T Consensus        87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf  166 (349)
T KOG1443|consen   87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF  166 (349)
T ss_pred             hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC---CChhhHHHHHHHHHHHHHHHHHHHhcchh-----hhhcCCCCcc-hHHHHHH
Q 020212          204 AVVFLANITTAIYLATIARIGKSSG---LNSFGLMWCNGVICGPLLLLWTFLRGDLE-----TTINFPYLLS-PGFLVVL  274 (329)
Q Consensus       204 ~~~l~s~~~~A~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-----~~~~~~~~~~-~~~~~~l  274 (329)
                      ++.++++++.++...+.|.++++.+   .+|.+..++..+.....++|..+..+...     +.+...+..+ ......+
T Consensus       167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i  246 (349)
T KOG1443|consen  167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI  246 (349)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence            9999999999999999999998653   58999999999988888877765544322     1222221111 2334566


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       275 ~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      .+.|..++...++.+..+.++|..+.++++..|.+.+.+++..+.+| .++..|
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d-~ls~lN  299 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKD-QLSLLN  299 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhc-chhhhH
Confidence            77888999999999999999999999999999999999999999987 777543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.91  E-value=8.4e-22  Score=183.54  Aligned_cols=267  Identities=12%  Similarity=0.070  Sum_probs=190.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      +..++.+.-=++..++..+.|..++. |.+ |..+.++|+.++.+++.++...++.+.+           +++.+++++.
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----------~~~~~~~~~~   79 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRS-----------LPPLSVSILS   79 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cCcchHHHHH
Confidence            33444444456667777788999864 665 6779999999998887766543321100           1113467778


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHH------hCcccCcchhhhhhHhhhhhhheec-cC
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFL------AGQKYTPPVVGSVGLIILGAFVAGA-RD  195 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~------~~e~~~~~~~~~l~l~~~Gv~l~~~-~~  195 (329)
                      ++...|++..+...+.+.+++|++++.+.++.+++|+++.+++.++      +|||.+++++.++++.++|+.+... ++
T Consensus        80 ~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g  159 (358)
T PLN00411         80 KIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHG  159 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccC
Confidence            8888887665566689999999999999999999999999999999      6999999999999999999976421 11


Q ss_pred             c-----------------------ccc-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCCh-hhHHHHHHHHHHHHHHHHH
Q 020212          196 L-----------------------SFD-FFGYAVVFLANITTAIYLATIARIGKSSGLNS-FGLMWCNGVICGPLLLLWT  250 (329)
Q Consensus       196 ~-----------------------~~~-~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~  250 (329)
                      .                       +.+ ..|.++.+++++++|+|++..||..++  +++ ...++++...+...+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~  237 (358)
T PLN00411        160 PRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIG  237 (358)
T ss_pred             cccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHH
Confidence            1                       112 449999999999999999999998774  444 4556666666555544443


Q ss_pred             HHhcch-hhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          251 FLRGDL-ETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       251 ~~~g~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ...++. ...+.  ...+... ..+++.++...+.....++++++.+|.+.++..+++|++++++|++++|| ++++.+
T Consensus       238 l~~~~~~~~~~~--~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE-~lt~~~  312 (358)
T PLN00411        238 LVVEKNNPSVWI--IHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND-SLYLGC  312 (358)
T ss_pred             HHHccCCcccce--eccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCC-CCcHHH
Confidence            332211 11111  1122222 23445555444434455789999999999999999999999999999998 888753

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.91  E-value=7e-22  Score=177.17  Aligned_cols=239  Identities=17%  Similarity=0.148  Sum_probs=184.6

Q ss_pred             HHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHH-HHHHHHHHHh
Q 020212           60 MFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLA-VAYLLYMVVS  138 (329)
Q Consensus        60 ~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~  138 (329)
                      ...|+.+++.  .++..+.+.|++.+.+++.+..+.+  +                 ++++++..+..+ +...++..+.
T Consensus         6 ~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~l~~~~~   64 (260)
T TIGR00950         6 VVIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR--P-----------------PLKRLLRLLLLGALQIGVFYVLY   64 (260)
T ss_pred             HHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc--c-----------------CHhHHHHHHHHHHHHHHHHHHHH
Confidence            3579988753  4588899999998877766654432  1                 123445566666 4567888899


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee-ccCcccchhhHHHHHHHHHHHHHHH
Q 020212          139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-ARDLSFDFFGYAVVFLANITTAIYL  217 (329)
Q Consensus       139 ~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~~~~~~~~G~~~~l~s~~~~A~~~  217 (329)
                      +.|++|++++...++.++.|+++.+++.+++|||++++++.+++++++|+.+.. .++.+.+..|++++++++++++.+.
T Consensus        65 ~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~  144 (260)
T TIGR00950        65 FVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGT  144 (260)
T ss_pred             HHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999998753 3334556789999999999999999


Q ss_pred             HHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHH-HHHHHhhccc
Q 020212          218 ATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY-SIFLNTTLNS  296 (329)
Q Consensus       218 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~~s  296 (329)
                      ++.|+..++.+.++.....+....+.+++.+.....++..       ..+...|..++..++++....+ ..++++++.+
T Consensus       145 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  217 (260)
T TIGR00950       145 VLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVD  217 (260)
T ss_pred             HHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999987644333445554667777777777665443321       1123345666777776655444 4477999999


Q ss_pred             hhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          297 AVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       297 a~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +.+.++..+++|+++++++++++|| ++++.
T Consensus       218 ~~~~s~~~~~~pv~~~ll~~~~~~E-~~~~~  247 (260)
T TIGR00950       218 PSAASILALAEPLVALLLGLLILGE-TLSLP  247 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCC-CCCHH
Confidence            9999999999999999999999998 87754

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.90  E-value=2.1e-21  Score=177.16  Aligned_cols=251  Identities=12%  Similarity=0.075  Sum_probs=190.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (329)
                      +...++|+...+    ..|..+++.   .|..+.++|+.++.+++.+....++.+               ..+++++++.
T Consensus        14 ~~~~~iWg~~~~----~~K~~~~~~---~p~~~~~~R~~~a~l~ll~~~~~~~~~---------------~~~~~~~~~~   71 (292)
T PRK11272         14 FALYIIWGSTYL----VIRIGVESW---PPLMMAGVRFLIAGILLLAFLLLRGHP---------------LPTLRQWLNA   71 (292)
T ss_pred             HHHHHHHhhHHH----HHHHHhccC---CHHHHHHHHHHHHHHHHHHHHHHhCCC---------------CCcHHHHHHH
Confidence            556666766655    569888754   588999999999988876665433211               0234667777


Q ss_pred             HHHHHHH-HHHHHHhhhhh-cccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec-cCcccchh
Q 020212          125 LPLAVAY-LLYMVVSVESV-RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA-RDLSFDFF  201 (329)
Q Consensus       125 ~~~~l~~-~~~~~~~~~al-~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~-~~~~~~~~  201 (329)
                      ...|.+. .....+.+.+. ++++++.+.++.++.|+++.+++.+ +|||++++++.+++++++|+.+... ++.+.+..
T Consensus        72 ~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~  150 (292)
T PRK11272         72 ALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPW  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchH
Confidence            7778654 55667778888 9999999999999999999999985 6999999999999999999987543 33455668


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHH
Q 020212          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (329)
Q Consensus       202 G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (329)
                      |.++++++++++|.+.+..||..+  + ++...+.++...+...+.+.....++..     ....+...|..+++.++++
T Consensus       151 G~l~~l~a~~~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        151 GAILILIASASWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHHHHH
Confidence            999999999999999999999753  2 3455667888787777766654433211     1112334466777777776


Q ss_pred             HHHHHHH-HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          282 FFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       282 ~~~~~~~-~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ....+.. ++++++.++.+.++..+++|+.++++|++++|| ++++.
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E-~~t~~  268 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGE-TLSPI  268 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCC-CCcHH
Confidence            6555544 678999999999999999999999999999998 77764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.90  E-value=2.9e-21  Score=176.58  Aligned_cols=262  Identities=12%  Similarity=-0.024  Sum_probs=173.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      .++.+..+...++........|.. .+  ++ |..+.++|+.++.+++.+....++.+ ++.        +++..+++++
T Consensus         7 ~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~-~~~--------~~~~~~~~~~   73 (296)
T PRK15430          7 RQGVLLALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQW-SYL--------KTLIQTPQKI   73 (296)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccH-HHH--------HHHHcCHHHH
Confidence            355444444444444444556875 43  34 88999999999887655544322110 000        0000123443


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccchh
Q 020212          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF  201 (329)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~  201 (329)
                      ......+.....+..+.++++++++++.++++.++.|+++.+++++++|||++++++.+++++++|+.+....+.+.   
T Consensus        74 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~---  150 (296)
T PRK15430         74 FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL---  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc---
Confidence            33333345677788999999999999999999999999999999999999999999999999999998754332222   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHH
Q 020212          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (329)
Q Consensus       202 G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (329)
                       .+++++++++||.|.+..||..++...+......|..+++.+...+..  ....   .... ......+..+...++.+
T Consensus       151 -~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~-~~~~~~~~~~~~~g~~t  223 (296)
T PRK15430        151 -PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA--DSST---SHMG-QNPMSLNLLLIAAGIVT  223 (296)
T ss_pred             -cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc--cCCc---cccc-CCcHHHHHHHHHHHHHH
Confidence             257888999999999998887542222333334444545444322111  1110   0000 11111234444555555


Q ss_pred             HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          282 FFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       282 ~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ....++.++++++.+|...++..+++|++++++|++++|| ++++.
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E-~~~~~  268 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGE-KPGAD  268 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHH
Confidence            5666677889999999999999999999999999999998 77764

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.89  E-value=8.3e-21  Score=173.52  Aligned_cols=247  Identities=13%  Similarity=0.118  Sum_probs=173.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHH
Q 020212           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (329)
Q Consensus        44 ~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (329)
                      .++.+++|+...+    ..|..++++   .|..+.++|+.++.+++.++..  +.+.+                +++++.
T Consensus         9 ~l~a~~~Wg~~~~----~~k~~~~~~---~P~~~~~~R~~~a~l~l~~~~~--~~~~~----------------~~~~~~   63 (295)
T PRK11689          9 GLIAILLWSTMVG----LIRGVSESL---GPVGGAAMIYSVSGLLLLLTVG--FPRLR----------------QFPKRY   63 (295)
T ss_pred             HHHHHHHHHHHHH----HHHHHHccC---ChHHHHHHHHHHHHHHHHHHcc--ccccc----------------cccHHH
Confidence            4566777776655    569988865   4889999999998877665431  11100                011223


Q ss_pred             HHHHHHHHHHHHHHhhhhhc----ccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc---
Q 020212          124 TLPLAVAYLLYMVVSVESVR----GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---  196 (329)
Q Consensus       124 ~~~~~l~~~~~~~~~~~al~----~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---  196 (329)
                      .+..++.+.....+.+.+++    +++...+.++.++.|+++.+++++++|||++++++.+++++++|+.+...++.   
T Consensus        64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~  143 (295)
T PRK11689         64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS  143 (295)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence            33334445566666666665    45778889999999999999999999999999999999999999987644332   


Q ss_pred             --------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcch
Q 020212          197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (329)
Q Consensus       197 --------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~  268 (329)
                              +.+..|+++++++++++|.|+++.||..+  +.++....+   ..+...+.+.....++..    .  ..++
T Consensus       144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~----~--~~~~  212 (295)
T PRK11689        144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPA----M--VFSL  212 (295)
T ss_pred             hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCcc----c--cCCH
Confidence                    12346999999999999999999999865  456655422   222233333222332211    1  1223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       269 ~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ..|..+++.++.+.......++++++.+|.+.++..+++|++++++|++++|| ++++.
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE-~~~~~  270 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLST-PLSFS  270 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCC-CCcHH
Confidence            34555666666555555566789999999999999999999999999999998 87764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.89  E-value=1.8e-20  Score=171.14  Aligned_cols=250  Identities=16%  Similarity=0.085  Sum_probs=184.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      .++..+.+.-.++........|+.+++.  + |..+.++|+.++.+++.++.+.++.+                .++|++
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~--~-~~~~~~~R~~~a~l~l~~~~~~~~~~----------------~~~~~~   71 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPLV--G-APGVTALRLALGTLILIAIFKPWRLR----------------FAKEQR   71 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHHc--C-HHHHHHHHHHHHHHHHHHHHhHHhcc----------------CCHHHH
Confidence            4555555555555556666899999864  4 77899999999988776654321111                234677


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec--cC-ccc
Q 020212          122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA--RD-LSF  198 (329)
Q Consensus       122 ~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~--~~-~~~  198 (329)
                      +..+..|++......+.+++++|+|++.+.++.++.|+++.+++    +|++.+  ...+.++++|+.+...  .+ .+.
T Consensus        72 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~  145 (293)
T PRK10532         72 LPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHV  145 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccC
Confidence            77888888777788889999999999999999999999998876    355544  4556777899876432  12 234


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHH
Q 020212          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (329)
Q Consensus       199 ~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~  278 (329)
                      +..|.++++++++++|.|.+..||..+  +.++... .+...++...+.+.....+.       ....++..|..++..+
T Consensus       146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~l~lg  215 (293)
T PRK10532        146 DLTGAALALGAGACWAIYILSGQRAGA--EHGPATV-AIGSLIAALIFVPIGALQAG-------EALWHWSILPLGLAVA  215 (293)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHH-HHHHHHHHHHHHHHHHHccC-------cccCCHHHHHHHHHHH
Confidence            567999999999999999999999865  3466665 45556666666665543321       0112333455566778


Q ss_pred             HHHHHHHHHH-HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          279 ILAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       279 ~~~~~~~~~~-~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +++....+.. ++++++.+|.++++..+++|++++++|++++|| ++++.
T Consensus       216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE-~~~~~  264 (293)
T PRK10532        216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGE-TLTLI  264 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCC-CCcHH
Confidence            8777777755 789999999999999999999999999999998 77764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.88  E-value=5.9e-20  Score=168.22  Aligned_cols=255  Identities=13%  Similarity=0.091  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHH
Q 020212           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (329)
Q Consensus        44 ~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (329)
                      .++.+++|+...+    ..|..+++.   .|..+.++|+.++.+.+....+.  .+                .++   +.
T Consensus         9 ~l~~~~~Wg~~~~----~~k~~~~~~---~p~~~~~~R~~~a~~~l~~~~~~--~~----------------~~~---~~   60 (299)
T PRK11453          9 ALLVVVVWGLNFV----VIKVGLHNM---PPLMLAGLRFMLVAFPAIFFVAR--PK----------------VPL---NL   60 (299)
T ss_pred             HHHHHHHHhhhHH----HHHHHHhcC---CHHHHHHHHHHHHHHHHHHHhcC--CC----------------Cch---HH
Confidence            4566777776666    459888754   48999999999876654433321  11                111   23


Q ss_pred             HHHHHHHH-HHHHHHhhhhhcc-cchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccC---ccc
Q 020212          124 TLPLAVAY-LLYMVVSVESVRG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---LSF  198 (329)
Q Consensus       124 ~~~~~l~~-~~~~~~~~~al~~-~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~  198 (329)
                      ....+++. .....+.+.+++| .+.+.+.++.++.|+++.+++++++|||++++++.+++++++|+.+...++   .+.
T Consensus        61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~  140 (299)
T PRK11453         61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHV  140 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcch
Confidence            44445543 3344466788888 689999999999999999999999999999999999999999998754332   233


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhcCCC-CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHH
Q 020212          199 DFFGYAVVFLANITTAIYLATIARIGKSSG-LNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS  277 (329)
Q Consensus       199 ~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~  277 (329)
                      +..|+++++.+++++|.|.++.||..++.+ ........++...+...........++...........++..|..+++.
T Consensus       141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            457999999999999999999999765321 1223344455555444333333222221110000012345567888888


Q ss_pred             HHHHHHHHHHH-HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          278 CILAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       278 ~~~~~~~~~~~-~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ++++....+.. ++++++.+|.+.++..+++|+.++++|++++|| ++++.
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE-~~~~~  270 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDE-RLTGL  270 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCC-CccHH
Confidence            88888777766 578999999999999999999999999999998 77764

>TIGR00688 rarD rarD protein

Probab=99.85  E-value=9.2e-19  Score=156.81  Aligned_cols=246  Identities=9%  Similarity=-0.010  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCccccHH-HHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLK-TLM  122 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~  122 (329)
                      ++++++|+..++    ..|+ ..+.   .|..+.++|++++.+.+.+.... ++.+..+ ++       .+..+++ .+.
T Consensus         8 i~a~~~wg~~~~----~~k~-~~~~---~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~   71 (256)
T TIGR00688         8 LLASFLFGYMYY----YSKL-LKPL---PATDILGHRMIWSFPFMLLSVTLFRQWAALI-ER-------LKRIQKRPLIL   71 (256)
T ss_pred             HHHHHHHHHHHH----HHHH-hccC---CHHHHHHHHHHHHHHHHHHHHHHHcchHHHH-HH-------HhCcccchHHH
Confidence            445555555544    5688 4433   48899999999988776554322 2111000 00       0001122 233


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccchhh
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG  202 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G  202 (329)
                      .....+++...+..+.+.++++++++.++++.+++|+++++++.+++|||++++++.+++++++|+.+...++.+.+   
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~---  148 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP---  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch---
Confidence            45556677888899999999999999999999999999999999999999999999999999999987543322211   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020212          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (329)
Q Consensus       203 ~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (329)
                       ++++++++++|.|.+..||..++   +..+.... .....+...+... .+++...   ........|..+...|+++.
T Consensus       149 -~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~~~g~~t~  219 (256)
T TIGR00688       149 -WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLL-QTDFATV---QQTNPFPIWLLLVLAGLITG  219 (256)
T ss_pred             -HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHH-HhccCcc---cccCchhHHHHHHHHHHHHH
Confidence             46889999999999999987542   22222221 1222222221111 1111110   00111123566667777766


Q ss_pred             HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHh
Q 020212          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWIL  318 (329)
Q Consensus       283 ~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~  318 (329)
                      ....+.+.++++.+|.+.++..+++|+.++++|+++
T Consensus       220 i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       220 TPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            666666889999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.83  E-value=3.5e-20  Score=156.26  Aligned_cols=261  Identities=18%  Similarity=0.168  Sum_probs=210.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC--------CCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHH
Q 020212           48 AISYMACAVLLVMFNKAALSSY--------NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK  119 (329)
Q Consensus        48 ~~~~~~~s~~~~~~nK~il~~~--------~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (329)
                      .++|+.-++..   -|..-.+|        .|++.+.+.++|+.+..+...++...++..               +.|..
T Consensus        22 fvCYF~yGI~Q---EkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~---------------~~D~t   83 (337)
T KOG1580|consen   22 FVCYFVYGIQQ---EKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKT---------------EIDNT   83 (337)
T ss_pred             hheehhhhhHH---HHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccc---------------cccCC
Confidence            34555556644   23333334        378888999999999988877665543211               11222


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccC----
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD----  195 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~----  195 (329)
                      .-+....+++-|.+..+.+|.|+||+|.++..+-|++-|+-++++...+.+++++|+++++++.+++|+.+..+.+    
T Consensus        84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~  163 (337)
T KOG1580|consen   84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG  163 (337)
T ss_pred             cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence            2356778889999999999999999999999999999999999999999999999999999999999998854432    


Q ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHH
Q 020212          196 ---LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLV  272 (329)
Q Consensus       196 ---~~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~  272 (329)
                         .+....|-++.++|....++.....+|+...++.++-.+++|+++.+.+.+-.-..++||..+...+. ..++..|+
T Consensus       164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~  242 (337)
T KOG1580|consen  164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFW  242 (337)
T ss_pred             CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHH
Confidence               22335788999999999999999999998877788899999999999888877777889975543222 23455678


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          273 VLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       273 ~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      -+.+.++.+...+++.|..+...+|++-|++..-++.++++.|+++|++ |++..+
T Consensus       243 ~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~n-pls~rQ  297 (337)
T KOG1580|consen  243 DLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNN-PLSGRQ  297 (337)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcC-cCcHHH
Confidence            8888899999999999999999999999999999999999999999997 988654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.82  E-value=1.4e-17  Score=152.50  Aligned_cols=251  Identities=12%  Similarity=0.092  Sum_probs=181.2

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHHh
Q 020212           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVS  138 (329)
Q Consensus        59 ~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  138 (329)
                      ...+.++-++ |++.|.+-+++-++.-.++.......++.+ +  +        .....++++++.+.++++-..++++.
T Consensus        29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~--~--------~~~~~~~~~w~y~lla~~Dv~aN~~~   96 (334)
T PF06027_consen   29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGF-K--K--------WLKVLKRPWWKYFLLALLDVEANYLV   96 (334)
T ss_pred             HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccc-c--c--------chhhcchhHHHHHHHHHHHHHHHHHH
Confidence            3345555555 778888777666654444333222222111 0  0        00122356677888899999999999


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc---------ccchhhHHHHHHH
Q 020212          139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLA  209 (329)
Q Consensus       139 ~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s  209 (329)
                      +.|++|++++.+|++.+++.+++++++++++|+|+++.++.++++.++|+.+....|.         +....|+++++++
T Consensus        97 v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~  176 (334)
T PF06027_consen   97 VLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLG  176 (334)
T ss_pred             HHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999987654432         2237899999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 020212          210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIF  289 (329)
Q Consensus       210 ~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  289 (329)
                      +++||+++++.|+..++  .+..+.+....+++.++..+..... |.....+.+  +++..+..++.-+++-+......-
T Consensus       177 a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p  251 (334)
T PF06027_consen  177 AILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVP  251 (334)
T ss_pred             HHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999884  5788888888888888776654432 332222222  233333444433333333333334


Q ss_pred             HHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       290 ~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ..++..||+.+.+--....+.++++++++||+ +++|+
T Consensus       252 ~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~-~~~~l  288 (334)
T PF06027_consen  252 IVLRMSSATFFNLSLLTSDFYALIIDIFFFGY-KFSWL  288 (334)
T ss_pred             HHHHhCccceeehHHHHhhHHHHHHHHHhcCc-cccHH
Confidence            57899999988888888899999999999997 88874

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.78  E-value=4.5e-17  Score=147.86  Aligned_cols=250  Identities=15%  Similarity=0.116  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHH
Q 020212           54 CAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLL  133 (329)
Q Consensus        54 ~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  133 (329)
                      +....+..+|...++.   ++  ...++...+.+.+.+....+..+ ++          .+..+++.+......+.....
T Consensus        12 ~~a~~~~~~k~~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~   75 (281)
T TIGR03340        12 MHAGWNLMAKSHADKE---PD--FLWWALLAHSVLLTPYGLWYLAQ-VG----------WSRLPATFWLLLAISAVANMV   75 (281)
T ss_pred             HHHHHHHHHhhcCCch---hH--HHHHHHHHHHHHHHHHHHHhccc-CC----------CCCcchhhHHHHHHHHHHHHH
Confidence            3334455677655532   23  34666655555554444322111 00          000222333334444456777


Q ss_pred             HHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccC-cccchhhHHHHHHHHHH
Q 020212          134 YMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-LSFDFFGYAVVFLANIT  212 (329)
Q Consensus       134 ~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~  212 (329)
                      ...+.+.++++.+++..+.+.++.|+++.+++++++|||++++++.++.+++.|+.+...++ .+.+..|..++++++++
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~  155 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALG  155 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999999999999999999998754332 23456788999999999


Q ss_pred             HHHHHHHHHHhhcCCCCChhh----HHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 020212          213 TAIYLATIARIGKSSGLNSFG----LMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI  288 (329)
Q Consensus       213 ~A~~~v~~k~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  288 (329)
                      ++.|.+..|+..++  .++..    .+.+..........+.....++..  ..   ..+...+..+...++.+.......
T Consensus       156 ~a~~~i~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~s~l~~~l~  228 (281)
T TIGR03340       156 TAIYSLSDKAAALG--VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF---PYARQILPSATLGGLMIGGAYALV  228 (281)
T ss_pred             HHHhhhhccccccc--hhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh---hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998876432  23221    222222222111111111112110  00   111222333444444444445556


Q ss_pred             HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       289 ~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ++++++.++.+.+...+++|++++++|++++|| +.++.
T Consensus       229 ~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE-~~~~~  266 (281)
T TIGR03340       229 LWAMTRLPVATVVALRNTSIVFAVVLGIWFLNE-RWYLT  266 (281)
T ss_pred             HHHHhhCCceEEEeecccHHHHHHHHHHHHhCC-CccHH
Confidence            789999999999999999999999999999998 77754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.76  E-value=6.3e-16  Score=135.63  Aligned_cols=265  Identities=17%  Similarity=0.183  Sum_probs=213.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh------cC-----CCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCcc
Q 020212           47 AAISYMACAVLLVMFNKAALS------SY-----NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTF  115 (329)
Q Consensus        47 ~~~~~~~~s~~~~~~nK~il~------~~-----~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (329)
                      +-+++++.++-.+++.--+++      .|     +|..+.++.+.|-+.+.++-+.+..+.+.+.+              
T Consensus        13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~--------------   78 (327)
T KOG1581|consen   13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELS--------------   78 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCC--------------
Confidence            334455555544444444443      12     57789999999999888887666554332211              


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheecc-
Q 020212          116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-  194 (329)
Q Consensus       116 ~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~-  194 (329)
                       ..+.+.+....++...++..+++.|++|++-+...+.|++--+-++++..++.|+|++..+++...++.+|+.+.... 
T Consensus        79 -~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~  157 (327)
T KOG1581|consen   79 -GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFP  157 (327)
T ss_pred             -CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEec
Confidence             113356677778888888999999999999999999999999999999999999999999999999999999774322 


Q ss_pred             --Cc------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCc
Q 020212          195 --DL------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLL  266 (329)
Q Consensus       195 --~~------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~  266 (329)
                        |.      ..+++|+.+...+.++.++.+...+++.++.+.++++++++.++++.+......+..|.+.+...+- ..
T Consensus       158 ~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~-~~  236 (327)
T KOG1581|consen  158 NSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFI-KE  236 (327)
T ss_pred             CCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHH-Hc
Confidence              21      2358899999999999999999999999999999999999999999888877766666665544432 23


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          267 SPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       267 ~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ++.++.-+.+.+.++.+.+...+.-+++.++++.+.+...|++++++++.+.||+ |+++.+
T Consensus       237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h-~~s~~q  297 (327)
T KOG1581|consen  237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGH-PLSSEQ  297 (327)
T ss_pred             ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCC-ccchhh
Confidence            4667788888899999999999999999999999999999999999999999997 988765

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.75  E-value=7.2e-17  Score=139.01  Aligned_cols=270  Identities=16%  Similarity=0.124  Sum_probs=211.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccH
Q 020212           40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFP-CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL  118 (329)
Q Consensus        40 ~~~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~-~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (329)
                      .-++-++++.-.++..+.--...+++++..+|. +.+.+|+.|+.+=..+-++-..  ..+           .++...||
T Consensus        40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~-----------~k~r~iP~  106 (367)
T KOG1582|consen   40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQ-----------TKRRVIPW  106 (367)
T ss_pred             hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eec-----------ccceecch
Confidence            344545555555555565566778888888887 7899999998755332221111  111           01222454


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccC---
Q 020212          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---  195 (329)
Q Consensus       119 ~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~---  195 (329)
                         |....++.+..++...+|.++.|.+.+...+.|.+-.+-+++.+.++-++|+++..+.+..+..+|.++.+..|   
T Consensus       107 ---rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~  183 (367)
T KOG1582|consen  107 ---RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT  183 (367)
T ss_pred             ---hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc
Confidence               55666777777888899999999999999999999999999999999999999999999999999999876655   


Q ss_pred             -cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHH
Q 020212          196 -LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVL  274 (329)
Q Consensus       196 -~~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l  274 (329)
                       .+||..|++..-.+.++.|+-....++.++..+-+..|+++|...++.++++.....+||+.++|.+-..+.+......
T Consensus       184 sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~  263 (367)
T KOG1582|consen  184 SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYA  263 (367)
T ss_pred             CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHH
Confidence             4788999999999999999998888898888788899999999999999998888899998888776544444344555


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccc
Q 020212          275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDF  326 (329)
Q Consensus       275 ~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~  326 (329)
                      .+-+..+++...+....++..+|.+...+...|+..++++|+++|.. |++.
T Consensus       264 ~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK-PfT~  314 (367)
T KOG1582|consen  264 FLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK-PFTE  314 (367)
T ss_pred             HHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC-chHH
Confidence            55555565555555567999999999999999999999999999975 9874

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.74  E-value=7.5e-15  Score=133.01  Aligned_cols=255  Identities=16%  Similarity=0.155  Sum_probs=173.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (329)
                      ....+.+...........|....+  ...+......|..............++.+.+           +   ..+..+..
T Consensus         9 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~   72 (292)
T COG0697           9 LLALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLR-----------P---ALRPWLLL   72 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhccccc-----------c---cccchHHH
Confidence            333344444444444455666654  1234555566888777663333332211000           0   01112333


Q ss_pred             HHH-HHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHH-HHhCcccCcchhhhhhHhhhhhhheeccCcccc---
Q 020212          125 LPL-AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY-FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD---  199 (329)
Q Consensus       125 ~~~-~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~-~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~---  199 (329)
                      ... ++.......+.+.++++++++.++++.++.|+++.+++. +++|||++++++.+++++++|+.++..++...+   
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~  152 (292)
T COG0697          73 LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILS  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHH
Confidence            333 456777888999999999999999999999999999997 677999999999999999999999776655433   


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHH-HHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHH
Q 020212          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW-CNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (329)
Q Consensus       200 ~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~  278 (329)
                      ..|.++++.+++++|.+.+..|+..   +.++..... +... . ..+........+..      ...+...+..+...+
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g  221 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLL-L-ALLLLLLFFLSGFG------APILSRAWLLLLYLG  221 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHH-H-HHHHHHHHHhcccc------ccCCHHHHHHHHHHH
Confidence            5899999999999999999999986   346666665 3333 1 11111111111110      112234467777777


Q ss_pred             HHHHH-HHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          279 ILAFF-LNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       279 ~~~~~-~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +++.. .....++++++.++...++....+|+.+++++++++|| +.+..
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e-~~~~~  270 (292)
T COG0697         222 VFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGE-PLSPA  270 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCC-CCcHH
Confidence            77775 44455789999999999999999999999999999998 66543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.69  E-value=5.7e-15  Score=130.67  Aligned_cols=204  Identities=13%  Similarity=0.112  Sum_probs=163.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc
Q 020212          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL  196 (329)
Q Consensus       117 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~  196 (329)
                      ++|+..++...+++|.+.+.+.+.++++++.+.+|+++.+-.++++++.++++|||.++++|.++.+.++|+++...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            35677788888999999999999999999999999999999999999999999999999999999999999988532211


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhh
Q 020212          197 -----------------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT  259 (329)
Q Consensus       197 -----------------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~  259 (329)
                                       +....|+++.++++++.++..++.+|++|+.+.+.+.........+.++.++.... .|....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence                             11257999999999999999999999999877677777777777777776655432 232222


Q ss_pred             hcC--CCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccc
Q 020212          260 INF--PYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDF  326 (329)
Q Consensus       260 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~  326 (329)
                      .+.  -..+++..|..++..++.|....+    .+|+.+...=.....+..+++.++++++||. +++.
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~-~~s~  235 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGF-PPSL  235 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CCch
Confidence            221  123445567777777777776665    5899999999999999999999999999986 7765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.68  E-value=1.8e-14  Score=123.39  Aligned_cols=233  Identities=18%  Similarity=0.141  Sum_probs=180.7

Q ss_pred             HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHHhhh
Q 020212           61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVE  140 (329)
Q Consensus        61 ~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  140 (329)
                      +.|.++...   -|.-.+++|..++.+++..+.+-.+.                +.++++++.+..+|.....++.++|.
T Consensus        30 ~Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~----------------r~~~~~~~~~~~yGvsLg~MNl~FY~   90 (292)
T COG5006          30 FAKSLFPLV---GAAGVTALRLAIAALILLALFRPWRR----------------RLSKPQRLALLAYGVSLGGMNLLFYL   90 (292)
T ss_pred             HHHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHh----------------ccChhhhHHHHHHHHHHHHHHHHHHH
Confidence            468888755   35568999999999887776653221                14567889999999999999999999


Q ss_pred             hhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee---ccCcccchhhHHHHHHHHHHHHHHH
Q 020212          141 SVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG---ARDLSFDFFGYAVVFLANITTAIYL  217 (329)
Q Consensus       141 al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~---~~~~~~~~~G~~~~l~s~~~~A~~~  217 (329)
                      +++.+|.+.+..+.++.|+.+.++..    +|  .+....+.+.+.|..+..   .+..+.|+.|..+++.+..|||.|.
T Consensus        91 si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YI  164 (292)
T COG5006          91 SIERIPLGIAVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYI  164 (292)
T ss_pred             HHHhccchhhhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHH
Confidence            99999999999999999998876653    32  344556667777876632   2334678999999999999999999


Q ss_pred             HHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHH-HHHhhccc
Q 020212          218 ATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-FLNTTLNS  296 (329)
Q Consensus       218 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~s  296 (329)
                      +..||..+  ..+.-+-+.+.+.+++++.+|+.....+       +...++.....-+..++++...-|+. ..++++.+
T Consensus       165 v~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp  235 (292)
T COG5006         165 VLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLP  235 (292)
T ss_pred             HHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence            99999986  3466677778888888888888753222       22344444455566777777777766 66899999


Q ss_pred             hhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          297 AVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       297 a~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      +-++++.-.+||..+.+.|++++|| ..|+.+
T Consensus       236 ~~~F~~LlSLePa~aAl~G~i~L~e-~ls~~q  266 (292)
T COG5006         236 ARTFGTLLSLEPALAALSGLIFLGE-TLTLIQ  266 (292)
T ss_pred             hhHHHHHHHhhHHHHHHHHHHHhcC-CCCHHH
Confidence            9999999999999999999999998 776543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.67  E-value=4.7e-14  Score=128.52  Aligned_cols=245  Identities=13%  Similarity=0.123  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (329)
                      ++++++|+..++.    .|.+.   +++.++..   |..++.++........+.  ++            ...++.+..-
T Consensus         7 lia~~~wGs~g~~----~k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~~--~~------------~~~~~~~~~g   62 (290)
T TIGR00776         7 LIPALFWGSFVLI----NVKIG---GGPYSQTL---GTTFGALILSIAIAIFVL--PE------------FWALSIFLVG   62 (290)
T ss_pred             HHHHHHHhhhHHH----HhccC---CCHHHHHH---HHHHHHHHHHHHHHHHhC--Cc------------ccccHHHHHH
Confidence            5667777777664    46654   44554432   666666655544332111  10            0112333444


Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhCcccCcch----hhhhhHhhhhhhheeccCcc--
Q 020212          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPV----VGSVGLIILGAFVAGARDLS--  197 (329)
Q Consensus       125 ~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~-~~p~~~~i~~~~~~~e~~~~~~----~~~l~l~~~Gv~l~~~~~~~--  197 (329)
                      +..|+++..++++.+.+.++++++.+..+-+ +.+++..+++.+++||+.++++    +.+++++++|+++....+.+  
T Consensus        63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~  142 (290)
T TIGR00776        63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA  142 (290)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence            4555668889999999999999999998888 8888999999999999999999    99999999999885432211  


Q ss_pred             -----cc-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHH---HHHHHHHHHHHHHHHHhcchhhhhcCCCCcch
Q 020212          198 -----FD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMW---CNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (329)
Q Consensus       198 -----~~-~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~  268 (329)
                           .+ ..|++++++|+++|+.|.+..|+.    ++++.+..+   +..+++.....+..  . +     + .++.+.
T Consensus       143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~-----~-~~~~~~  209 (290)
T TIGR00776       143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--I-L-----A-KPLKKY  209 (290)
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--h-c-----c-cchHHH
Confidence                 33 689999999999999999999975    258888744   44444443332221  0 0     0 111122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          269 GFLVVLCFSCILAFFLNYSIFLNTT-LNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       269 ~~~~~l~~~~~~~~~~~~~~~~~i~-~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ..+. ....|++....+...+...+ +.++.+.++...++|+.+++.+++++|| +.++.|
T Consensus       210 ~~~~-~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E-~~~~~~  268 (290)
T TIGR00776       210 AILL-NILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGE-KKTKRE  268 (290)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhcc-CCCcce
Confidence            2233 33377775444444457788 9999999999999999999999999998 877665

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.66  E-value=1.1e-16  Score=137.57  Aligned_cols=251  Identities=11%  Similarity=0.072  Sum_probs=186.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHH
Q 020212           45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT  124 (329)
Q Consensus        45 ~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (329)
                      .+..+. +..+..+.+..|.+..     .|..+.-.|+++-.+..+++....+..+  ..+    +..|        +.+
T Consensus        41 ~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp----~g~R--------~~L  100 (346)
T KOG4510|consen   41 LLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPV--IGP----EGKR--------KWL  100 (346)
T ss_pred             eehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeee--ecC----CCcE--------EEE
Confidence            455555 5556666666666643     3677888887766666665543222111  001    0011        223


Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheecc-----Cc---
Q 020212          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-----DL---  196 (329)
Q Consensus       125 ~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~-----~~---  196 (329)
                      +.-|.....+....++|++|++++.+.++.+++|+||.++++.++||++++...++.++.+.||++...+     |.   
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g  180 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG  180 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence            4447766777889999999999999999999999999999999999999999999999999999885332     11   


Q ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHH
Q 020212          197 ------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGF  270 (329)
Q Consensus       197 ------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~  270 (329)
                            +.+..|-+.++.++++.|.-.++.|++.+  +.+......|-..++.+..++.....|++.    .|.  ...-
T Consensus       181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~----lP~--cgkd  252 (346)
T KOG4510|consen  181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQ----LPH--CGKD  252 (346)
T ss_pred             cccccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhcccee----cCc--cccc
Confidence                  23456899999999999988899999977  457677777878888777776665556542    221  1222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcC
Q 020212          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLP  323 (329)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~  323 (329)
                      |++++..|+.|+..+....+++++--|...++..+..-+++.+.-+++|||.|
T Consensus       253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~P  305 (346)
T KOG4510|consen  253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWP  305 (346)
T ss_pred             eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCC
Confidence            56778889999999999889999889999999999999999999999999854

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.62  E-value=5.5e-15  Score=133.05  Aligned_cols=206  Identities=17%  Similarity=0.127  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc--
Q 020212          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--  196 (329)
Q Consensus       119 ~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~--  196 (329)
                      +..+.-+.++.++.+.++++|.||.+++++..+++.+++-+||..++.++.+||+++.|.+++.+.+.|+++++.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            455556667778888999999999999999999999999999999999999999999999999999999999876643  


Q ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCC--CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcch
Q 020212          197 ------SFDFFGYAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP  268 (329)
Q Consensus       197 ------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~  268 (329)
                            +-...|.+++++||+.||+|.++.||...++  +.|--....|..++..++++|..++..-. ....++...+.
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~  315 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSST  315 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCc
Confidence                  2237899999999999999999999988765  34444445566666666666543321111 00112222223


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          269 GFLVVLCFSCI-LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       269 ~~~~~l~~~~~-~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      .+ ..+++.++ ..++.-+.+.++.-.++|++.++--.+...++++.-.++=| .+.++.
T Consensus       316 q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~-~~~S~~  373 (416)
T KOG2765|consen  316 QF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKG-KHPSAL  373 (416)
T ss_pred             ee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcC-CCCCHH
Confidence            33 33444444 44566777788999999999999888877777666555544 476653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.59  E-value=1.6e-14  Score=118.91  Aligned_cols=126  Identities=30%  Similarity=0.467  Sum_probs=109.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcC-----CCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCC-----CCc-chHH
Q 020212          202 GYAVVFLANITTAIYLATIARIGKS-----SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFP-----YLL-SPGF  270 (329)
Q Consensus       202 G~~~~l~s~~~~A~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~-----~~~-~~~~  270 (329)
                      |++++++|.++.|+++++.|+..++     .+.++.++++|+++.+.+.+++..+..|+........     ... +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999999987     5899999999999999999999887776654221111     111 4566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      +..++.+|++++..|++.+.+++++||+++++++++|.+..+++|+++||| ++|+.+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~-~~t~~~  137 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGE-PITPLQ  137 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCC-cCCHHH
Confidence            788999999999999999999999999999999999999999999999997 888754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.56  E-value=4.4e-12  Score=111.47  Aligned_cols=259  Identities=15%  Similarity=0.081  Sum_probs=184.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccc--cccccCCCCccCCCCCccccHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKI--INFTMGDSLMTSDSSSTFVPLK  119 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  119 (329)
                      ++|++.++.-++....+.+.-|.+-..    .+..+...|.+-+..++.......+  ..+.+           ...++|
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~----~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-----------~~~~p~   70 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLEPL----PATEILAHRVIWSFPFMLALLFLLRQWRELKQ-----------LLKQPK   70 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHccC----CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-----------HHhCcH
Confidence            567666666666666677888888542    3678999999988877665543321  11110           001224


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcccc
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD  199 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~  199 (329)
                      .+......+++...+...+.+|...-.+=+++.--+..|++.++++.+++|||+++.|++++.++.+||..-.....+++
T Consensus        71 ~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lp  150 (293)
T COG2962          71 TLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLP  150 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            45555566677778888888999888888888899999999999999999999999999999999999988666556666


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHH
Q 020212          200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI  279 (329)
Q Consensus       200 ~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~  279 (329)
                      +    .++.=++.++.|... ||..   +.|+.+-.....+.-.+..+.+.+..++-.+   +....+...+.++..+|.
T Consensus       151 w----val~la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~  219 (293)
T COG2962         151 W----VALALALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGL  219 (293)
T ss_pred             H----HHHHHHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhH
Confidence            4    455556789999886 4433   4577776666666555555544433333221   111123344677777787


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       280 ~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      .+..--.+...+-|+.+=.+..+..+++|....+++++++|| |+|..
T Consensus       220 vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E-~~~~~  266 (293)
T COG2962         220 VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGE-PFDSD  266 (293)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHH
Confidence            665544444567899999999999999999999999999998 98853

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.49  E-value=5.1e-14  Score=121.94  Aligned_cols=234  Identities=20%  Similarity=0.283  Sum_probs=176.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHHhhhhhcc-cchhHHHH
Q 020212           74 ANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRG-VNVPMYTT  152 (329)
Q Consensus        74 p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~-~~vs~~~~  152 (329)
                      ..++|+.|+++.+.-  .+....  ++...         +..+|.|+   +...-..+.....++|+++++ ++++...+
T Consensus        33 gNLITFaqFlFia~e--Glif~s--kf~~~---------k~kiplk~---Y~i~V~mFF~vnv~NN~al~f~I~~PlHiI   96 (330)
T KOG1583|consen   33 GNLITFAQFLFIATE--GLIFTS--KFFTV---------KPKIPLKD---YAITVAMFFIVNVTNNYALKFNIPMPLHII   96 (330)
T ss_pred             eeehHHHHHHHHHHh--ceeeec--ccccc---------CCCCchhh---hheehheeeeeeeeccceeeecccceEEEE
Confidence            457899999865442  221111  11110         11144443   333344555667799999998 79999999


Q ss_pred             HHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec---cCccc------------c----hhhHHHHHHHHHHH
Q 020212          153 LRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSF------------D----FFGYAVVFLANITT  213 (329)
Q Consensus       153 l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~---~~~~~------------~----~~G~~~~l~s~~~~  213 (329)
                      +|+-+++-++++.+++.|+|++.+|+.+++.+.+|+++++.   .|...            +    ..|+.+..++.+..
T Consensus        97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s  176 (330)
T KOG1583|consen   97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS  176 (330)
T ss_pred             EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998643   22110            0    45888899999999


Q ss_pred             HHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhh----hhcCC-----C--CcchHHHHHHHHHHHHHH
Q 020212          214 AIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLET----TINFP-----Y--LLSPGFLVVLCFSCILAF  282 (329)
Q Consensus       214 A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~----~~~~~-----~--~~~~~~~~~l~~~~~~~~  282 (329)
                      |...++.++..++++-++-|.++|+.+++.++.+...   +|..+    .+..+     .  ..-|..|..++.+++.-+
T Consensus       177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~---~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy  253 (330)
T KOG1583|consen  177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMG---DDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQY  253 (330)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhc---chHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHH
Confidence            9999999999998888999999999999988776442   23222    11111     1  113566888899998888


Q ss_pred             HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       283 ~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +..-..+..-.+++++|++++-++|+.++.++|.+.|++ |+++.
T Consensus       254 ~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N-pft~~  297 (330)
T KOG1583|consen  254 FCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN-PFTPW  297 (330)
T ss_pred             HHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC-CCCHH
Confidence            776666778889999999999999999999999999976 99874

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.46  E-value=8e-12  Score=108.59  Aligned_cols=202  Identities=17%  Similarity=0.128  Sum_probs=151.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc------
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------  196 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~------  196 (329)
                      ..+|.+++=..+...-|.++.+++++.+|++|-...+|+.+++..+++++.+.++|+++....+|++.++..|.      
T Consensus        88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p  167 (372)
T KOG3912|consen   88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP  167 (372)
T ss_pred             eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC
Confidence            45677888788888899999999999999999999999999999999999999999999999999988765542      


Q ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHH-----HhcchhhhhcCCCCcc
Q 020212          197 ----SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTF-----LRGDLETTINFPYLLS  267 (329)
Q Consensus       197 ----~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~g~~~~~~~~~~~~~  267 (329)
                          +--..|.++.+++-+.-|.+.++.+|.+++.+.+|.+...|..+++.+++-....     ..|+-........+.|
T Consensus       168 ~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD  247 (372)
T KOG3912|consen  168 YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED  247 (372)
T ss_pred             ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence                2225799999999999999999999999999999999999999998655433221     1121100000000111


Q ss_pred             hHH---------HHHHHHHHH--HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcc
Q 020212          268 PGF---------LVVLCFSCI--LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFD  325 (329)
Q Consensus       268 ~~~---------~~~l~~~~~--~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~  325 (329)
                      +..         -+.+...+.  .-.+.|+......|+.||++-.+.+.+|+....+++.....| .|.
T Consensus       248 ~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E-~f~  315 (372)
T KOG3912|consen  248 WGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWE-YFH  315 (372)
T ss_pred             HHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHH-HHH
Confidence            000         122222222  223467777777899999999999999999988888877765 443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.44  E-value=1.6e-10  Score=104.46  Aligned_cols=272  Identities=14%  Similarity=0.111  Sum_probs=184.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCc--cccH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSY--NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSST--FVPL  118 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~--~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  118 (329)
                      ...+..+.--+-..++....||.-...  .|. |.+.-++--+.-.+++......+..+..+...    +..++  ...+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~----~~l~~~i~~~~   89 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSL----KSLSKEILAAP   89 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhh----hhcCHHHHhCh
Confidence            334444444556666777778766543  233 44444443334444444333222101000000    00011  1334


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheecc----
Q 020212          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR----  194 (329)
Q Consensus       119 ~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----  194 (329)
                      ++..++...+++|.+.+-..+.++.+.+.+++|+.-.+-.+.|+++.+++++||.+++||.++++.++|+.++-.+    
T Consensus        90 ~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   90 RETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            5667788888999998889999999999999999999999999999999999999999999999999999885311    


Q ss_pred             -C------cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhh--hcCCCC
Q 020212          195 -D------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT--INFPYL  265 (329)
Q Consensus       195 -~------~~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~--~~~~~~  265 (329)
                       +      .+-...|....+.+.+++++-.++.++++++.+.+-+-...-...++.++.+...+.. |....  ..+-..
T Consensus       170 ~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~G  248 (345)
T KOG2234|consen  170 TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFYG  248 (345)
T ss_pred             CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCcccc
Confidence             1      1224789999999999999999999999987776666666666677776665544333 33222  122234


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcc
Q 020212          266 LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFD  325 (329)
Q Consensus       266 ~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~  325 (329)
                      ++...|..++..++-|...++.    +|+.+-..=.....+-.+++.+.|+.+||- +.|
T Consensus       249 ~s~~vw~vVl~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~-~~t  303 (345)
T KOG2234|consen  249 YSSIVWLVVLLNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDF-QLT  303 (345)
T ss_pred             ccHHHHHHHHHHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccC-Cch
Confidence            5667788888888888877765    666666665666667788888999888874 544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.01  E-value=2.3e-09  Score=84.48  Aligned_cols=117  Identities=15%  Similarity=0.180  Sum_probs=93.0

Q ss_pred             HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHH-HHHHHHH
Q 020212           59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLYMVV  137 (329)
Q Consensus        59 ~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  137 (329)
                      ...+|...++.  + |...+.+|+..+.+ +..+......+.            .+..+++++......+++ ...+..+
T Consensus         7 ~~~~k~~~~~~--~-~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    7 SVFSKKLLKKI--S-PLSITFWRFLIAGI-LLILLLILGRKP------------FKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             HHHHHHHhccC--C-HHHHHHHHHHHHHH-HHHHHHhhcccc------------ccCCChhhhhhhhHhhccceehHHHH
Confidence            44678888864  4 77899999999986 444433222110            011345666777777766 5888999


Q ss_pred             hhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       138 ~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      .+.++++++++..+++.++.|+++.+++++++||+++++++.++++++.|+.+.
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.95  E-value=2.7e-09  Score=83.31  Aligned_cols=108  Identities=11%  Similarity=0.145  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhHH
Q 020212           79 LLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTT  157 (329)
Q Consensus        79 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~al~~~~vs~~~~l~~~~  157 (329)
                      .+|+.++.+.+......++ +.++.         .+...++.+......|++.. .+..+.++|+++.+ +....+.+++
T Consensus         2 a~r~~~~~l~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~   70 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRG-RLRDL---------FRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLS   70 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHc-cHHHH---------HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence            4677777776665544322 11100         00112234455556666554 78889999999999 6888999999


Q ss_pred             HHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCcc
Q 020212          158 VAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS  197 (329)
Q Consensus       158 p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~  197 (329)
                      |+++.+++.+++|||++++++.+++++++|+++...+|.+
T Consensus        71 pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   71 PIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999999999999987766654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.93  E-value=3.1e-09  Score=88.13  Aligned_cols=173  Identities=14%  Similarity=0.139  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc--cc
Q 020212          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--SF  198 (329)
Q Consensus       121 ~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~--~~  198 (329)
                      +++..|.++++.+.++.+..+++.++.+.++.+..+.-.|+.+++++.+|+|+..-++++.++++.|+++..+.|.  ..
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            4567788999999999999999999999999999999999999999999999999999999999999999776553  45


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHH------HHHHhcc--hhhhhcCCCCcchHH
Q 020212          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLL------WTFLRGD--LETTINFPYLLSPGF  270 (329)
Q Consensus       199 ~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~g~--~~~~~~~~~~~~~~~  270 (329)
                      ++.|+.+++.|++..|+|.+.-|+...+.+.  -+...+++-++..=+..      ...++|.  |++. ..      ..
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~--Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF-A~------~P  203 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANF--GDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF-AA------AP  203 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcc--hhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH-hh------CC
Confidence            7899999999999999999999999875433  33444444333222111      1122331  2211 11      12


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHH
Q 020212          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI  302 (329)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv  302 (329)
                      |..++..+.+....|+.....+..+.|...|+
T Consensus       204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISi  235 (290)
T KOG4314|consen  204 WGCLCGAAGLSLAFNFLINFGIALLNPILISI  235 (290)
T ss_pred             chhhhhHHHHHHHHhhheeehhhhhchhhhee
Confidence            56677777777777887777777777766654

>TIGR00803 nst UDP-galactose transporter

Probab=98.88  E-value=1.9e-08  Score=88.05  Aligned_cols=173  Identities=17%  Similarity=0.148  Sum_probs=114.7

Q ss_pred             cchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc---------------------------c
Q 020212          145 VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------------------------S  197 (329)
Q Consensus       145 ~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------------------------~  197 (329)
                      +++|.....++..++++++......+||++..++++.++...|+......|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5788899999999999999999999999999999999999999875221111                           1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcc----hhhhhcCC--CCcchHHH
Q 020212          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGD----LETTINFP--YLLSPGFL  271 (329)
Q Consensus       198 ~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----~~~~~~~~--~~~~~~~~  271 (329)
                      ....|....+.+.++.+...++.++..++++.     ++|...+...+..+.....++    .......+  ..++...|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT-----MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC-----chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            23557777777778888888888887654322     255444443333222111111    11111111  11223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       272 ~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ..++..++.    ..+..+.+|+.++.+.+++..++++.+.++|+++||| |+++.
T Consensus       157 ~~~~~~a~~----~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~-~ls~~  207 (222)
T TIGR00803       157 IVGLLNVGG----GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDA-KISST  207 (222)
T ss_pred             HHHHHHHhc----CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHH
Confidence            333333333    3445567999999999999999999999999999997 88753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.87  E-value=2.7e-08  Score=76.98  Aligned_cols=121  Identities=17%  Similarity=0.217  Sum_probs=98.2

Q ss_pred             HHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHH
Q 020212           57 LLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYM  135 (329)
Q Consensus        57 ~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  135 (329)
                      ...++.|.-+++.   .|.+-+..|.++..+++...... |+.+-            ..+.+.|.+..+..-|+.-.++.
T Consensus        17 L~~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~~~------------~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510          17 LTPIFAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNWQA------------GGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCceec------------ccccCcceehhhhHHHHHHHHHH
Confidence            3356789998865   47789999999888777666543 33221            11144566776667778888899


Q ss_pred             HHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          136 VVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       136 ~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      .+++.|++.-.+|...-+-.++|+++.+++++++|||++.++|++++++.+|+++.+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999999999999999999998764

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.82  E-value=3.5e-09  Score=91.25  Aligned_cols=241  Identities=14%  Similarity=0.130  Sum_probs=163.6

Q ss_pred             HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Q 020212           58 LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV  137 (329)
Q Consensus        58 ~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  137 (329)
                      ..+.+.++-.. +.+.|..-++.....-+++..++..++..-+                 .-.|++.+.+++.=.-++++
T Consensus        33 ~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~-----------------~~~~~hYilla~~DVEaNy~   94 (336)
T KOG2766|consen   33 TAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRRKYI-----------------KAKWRHYILLAFVDVEANYF   94 (336)
T ss_pred             chhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhhHHH-----------------HHHHHHhhheeEEeecccEE
Confidence            34456666554 4677877777766655555555544432110                 12345566666554445666


Q ss_pred             hhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc--------ccchhhHHHHHHH
Q 020212          138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--------SFDFFGYAVVFLA  209 (329)
Q Consensus       138 ~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~s  209 (329)
                      -..|.||++....+.+-.-..+.+++++++++|.|+++.++.++++-..|+++....|.        +....|+++.+++
T Consensus        95 vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~G  174 (336)
T KOG2766|consen   95 VVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAG  174 (336)
T ss_pred             EeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEec
Confidence            67899999999999999999999999999999999999999999999999988644332        2236799999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHH-
Q 020212          210 NITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSI-  288 (329)
Q Consensus       210 ~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-  288 (329)
                      +-+||+.++..+.+.+  +.+..+++....+++.++..+-.+. +.- ....  -.+++.....+.  ..++.++-++. 
T Consensus       175 ATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~-~~~-~~~t--l~w~~~i~~yl~--f~L~MFllYsl~  246 (336)
T KOG2766|consen  175 ATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIF-ERH-HVST--LHWDSAIFLYLR--FALTMFLLYSLA  246 (336)
T ss_pred             ceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhh-hcc-ceee--EeehHHHHHHHH--HHHHHHHHHHhh
Confidence            9999999999999987  6799999998899988877665322 111 1111  112222111111  22222233333 


Q ss_pred             HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       289 ~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      =..+|..||+.+.+--.-...+++++  -.|| .+++|+
T Consensus       247 pil~k~~~aT~~nlslLTsDmwsl~i--~~Fg-Yhv~wL  282 (336)
T KOG2766|consen  247 PILIKTNSATMFNLSLLTSDMWSLLI--RTFG-YHVDWL  282 (336)
T ss_pred             HHheecCCceEEEhhHhHHHHHHHHH--HHHh-cchhhh
Confidence            24578888888777777778888887  5666 367775

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.74  E-value=1.2e-07  Score=73.42  Aligned_cols=117  Identities=10%  Similarity=0.060  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020212          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (329)
Q Consensus       203 ~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (329)
                      .+++++|++++++..++.|.-.+  +.||...++.-+.....++..+...+|.+....+    .++..|..+.++|+.+-
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~----~~~k~~lflilSGla~g   78 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE----IGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc----cCcceehhhhHHHHHHH
Confidence            58999999999999999988776  6788888888888888888888888887643322    34455788999998888


Q ss_pred             HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccc
Q 020212          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDF  326 (329)
Q Consensus       283 ~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~  326 (329)
                      ...++.|++++.-.++.+...+-..+++++++|++++|| .+|.
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E-~ls~  121 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGE-RLSL  121 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcC-CCCH
Confidence            888888999999999999999999999999999999998 6664

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.67  E-value=1.2e-06  Score=78.40  Aligned_cols=133  Identities=12%  Similarity=0.014  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      .++....+.-.++........|...++++- .+..+..+|+.++.+.+.+........              ...+.+++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~  191 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPN--------------PQALSLQW  191 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCC--------------CCcchHHH
Confidence            355555555555555556678888876532 233455578888877766665432211              00234556


Q ss_pred             HHHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhh
Q 020212          122 MHTLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (329)
Q Consensus       122 ~~~~~~~l~-~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~  189 (329)
                      ...+..+++ ......+++.++++.+++...++.++.|++..+++++++||++++.++.+..+++.|+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            656666655 46678899999999999999999999999999999999999999999999999999873

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.50  E-value=1.1e-05  Score=71.72  Aligned_cols=191  Identities=10%  Similarity=0.058  Sum_probs=135.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhCcccCcchhh----hhhHhhhhhhheec
Q 020212          119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVG----SVGLIILGAFVAGA  193 (329)
Q Consensus       119 ~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~-~~~p~~~~i~~~~~~~e~~~~~~~~----~l~l~~~Gv~l~~~  193 (329)
                      +.+..-+..|+++..++...+.|++++.+|.+-=+. ...-+.+.+..+++++|..+..++.    +++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            556666777899999999999999999888766554 4667778999999999998776664    88889999998655


Q ss_pred             cCcc--------cchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCC
Q 020212          194 RDLS--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYL  265 (329)
Q Consensus       194 ~~~~--------~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~  265 (329)
                      .|.+        ....|+...+++.+.|..|.+..|..    +.|+++..+=++.-..+...++....++  ...+..  
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~~k~--  194 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKK--PFFEKK--  194 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccc--cccccc--
Confidence            4322        12569999999999999999997663    4588777664433322222233322211  111111  


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCc
Q 020212          266 LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGL  322 (329)
Q Consensus       266 ~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~  322 (329)
                          . +.=+..|++=-..|++.+.+.++.+..+.=...-+..+.+.+-|.++|||.
T Consensus       195 ----~-~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~  246 (269)
T PF06800_consen  195 ----S-WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK  246 (269)
T ss_pred             ----h-HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec
Confidence                1 222345555555566667778888888888888889999999999999984

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.45  E-value=7.5e-07  Score=69.97  Aligned_cols=108  Identities=23%  Similarity=0.300  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHH-HHHHHHHH
Q 020212          211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA-FFLNYSIF  289 (329)
Q Consensus       211 ~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~  289 (329)
                      +++|.+.+..|+..+  +.|+.+..++....+.+ +.+.....+...     ....+...+..+...++++ ...+...+
T Consensus         1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence            467889999999987  47999999999999887 555544433321     1112222345555666654 55556668


Q ss_pred             HHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          290 LNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       290 ~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      .+++++++...++..+++|+.+.+++++++|| ++++.
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e-~~~~~  109 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGE-RPSWR  109 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCC-CCCHH
Confidence            89999999999999999999999999999997 77764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.31  E-value=2.1e-05  Score=72.01  Aligned_cols=126  Identities=13%  Similarity=0.047  Sum_probs=91.9

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHH
Q 020212          196 LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLC  275 (329)
Q Consensus       196 ~~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~  275 (329)
                      .+....|.++.++++++++...+..|.. .  +.++.++.++...++.+++++.....++.......  ..++..+...+
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~   77 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLA   77 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHH
Confidence            3344679999999999999999999764 4  57999999999999988776665444443221110  01222233333


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       276 ~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ..++.....+.+.+++++++++...++..+..|++..+++++++|| +++..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E-~~~~~  128 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGE-RFRRM  128 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcC-CCcHH
Confidence            4444444456666889999999999999999999999999999997 77754

>TIGR00688 rarD rarD protein

Probab=98.27  E-value=2.6e-05  Score=69.72  Aligned_cols=123  Identities=14%  Similarity=0.099  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhh-hcCCCCcchHHHHHHHHHHH
Q 020212          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI  279 (329)
Q Consensus       201 ~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~l~~~~~  279 (329)
                      .|.++.++++++++...+..|. ..  +.++.++.++-..++.+.+.++....++.... .+.........+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4889999999999999999997 34  48999999999999988776665444432111 01111111112345566666


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          280 LAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       280 ~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      +....+.+.+.+++++++.+.++..+..|+++.+++++++|| ++++.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~E-k~~~~  125 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKE-RISRF  125 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHH
Confidence            666666677889999999999999999999999999999997 87764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.20  E-value=9.1e-06  Score=63.04  Aligned_cols=64  Identities=19%  Similarity=0.179  Sum_probs=59.3

Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       129 l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      .++.+..++...+++++|++.+..+-++.++++.+.+++++|||++++++.++.++++|+++.+
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4567788899999999999999999999999999999999999999999999999999997743

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.15  E-value=8.3e-05  Score=69.76  Aligned_cols=122  Identities=13%  Similarity=0.149  Sum_probs=82.9

Q ss_pred             HHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccc-cccccCCCCccCCCCCccccHHHHHHHHHHHHHHHHHHHHh
Q 020212           60 MFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKI-INFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVS  138 (329)
Q Consensus        60 ~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  138 (329)
                      +..|....++  +.+...++++..+..+.+.+...... ...+.  .       ....+... ..++-.++.-.+...++
T Consensus       206 il~~~~~~~~--~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~--~-------~~~~~~~~-~~i~y~~i~t~lay~lw  273 (358)
T PLN00411        206 ILQAHIMSEY--PAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV--W-------IIHFDITL-ITIVTMAIITSVYYVIH  273 (358)
T ss_pred             HHHHHHHHHc--CcHhHHHHHHHHHHHHHHHHHHHHHccCCccc--c-------eeccchHH-HHHHHHHHHHHHHHHHH
Confidence            3556666654  55556777888777665544333210 00000  0       00012221 12222334444566789


Q ss_pred             hhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          139 VESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       139 ~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      ++++++.+++.+.+...+.|++.+++++++++|++++.++++.+++++|+.++..
T Consensus       274 ~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        274 SWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999988643

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.15  E-value=7.2e-05  Score=68.26  Aligned_cols=134  Identities=13%  Similarity=0.131  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHHH
Q 020212           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH  123 (329)
Q Consensus        44 ~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (329)
                      +.++++.-..+.......+|..-.    +.+...+.+|+.++...+.+.........            ....+.+.+..
T Consensus       151 G~l~~l~a~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~  214 (292)
T PRK11272        151 GAILILIASASWAFGSVWSSRLPL----PVGMMAGAAEMLAAGVVLLIASLLSGERL------------TALPTLSGFLA  214 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC----CcchHHHHHHHHHHHHHHHHHHHHcCCcc------------cccCCHHHHHH
Confidence            333333333333333344565432    12445678888888776655543211100            00123455666


Q ss_pred             HHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          124 TLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       124 ~~~~~l~-~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      +...+++ ..+...++++++++.+.+...++..+.|++.++++++++||++++.++.+.++++.|+.+...
T Consensus       215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            6666654 456778999999999999999999999999999999999999999999999999999987544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.10  E-value=0.00014  Score=66.48  Aligned_cols=131  Identities=14%  Similarity=0.135  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      .+.++++.-.++.....+..|....++  + |.... ++..++.+++.+........              ...++..+.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~~~--~-~~~~~-~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~  209 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGAEH--G-PATVA-IGSLIAALIFVPIGALQAGE--------------ALWHWSILP  209 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccC--C-chHHH-HHHHHHHHHHHHHHHHccCc--------------ccCCHHHHH
Confidence            355555555555555555677776543  3 44444 44455555444433321100              002233344


Q ss_pred             HHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          123 HTLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       123 ~~~~~~l~-~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      ..+..+++ ..+...++++++++++.+.++++..+.|++..++++++++|+++..++.+..+++.|++..
T Consensus       210 ~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        210 LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence            44455654 4556678999999999999999999999999999999999999999999999999999775

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.09  E-value=4.8e-05  Score=69.52  Aligned_cols=194  Identities=15%  Similarity=0.121  Sum_probs=113.1

Q ss_pred             HHHHH-HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee-cc--Ccc-c
Q 020212          124 TLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-AR--DLS-F  198 (329)
Q Consensus       124 ~~~~~-l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~--~~~-~  198 (329)
                      .+..| +++.++......|+.+.|.+..+-+.....++..+++..++|||++++.+.++.++++|..+.. .+  +.+ .
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~  131 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIH  131 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcC
Confidence            34455 3567788899999999999999999999999999999999999999999999999999997632 21  111 1


Q ss_pred             c---------hhh---HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhh-cCCCC
Q 020212          199 D---------FFG---YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPYL  265 (329)
Q Consensus       199 ~---------~~G---~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~  265 (329)
                      +         ..+   +...... ++..+.....+|..++   +........+.++..-.+..-....-..... ..+..
T Consensus       132 t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~---~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f  207 (300)
T PF05653_consen  132 TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR---NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQF  207 (300)
T ss_pred             CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhccc---ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhh
Confidence            1         012   1111111 1111212222222111   1111111122222221111100000011111 11223


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhh-hHHHHHHHHHHHhhCC
Q 020212          266 LSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGN-LKDLFTIGLGWILFGG  321 (329)
Q Consensus       266 ~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~-l~~i~~~~~~~~~fge  321 (329)
                      .++.+|.+++....++....+..++++++.+++.+.++.+ +-...+++-|.++|+|
T Consensus       208 ~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e  264 (300)
T PF05653_consen  208 TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQE  264 (300)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcc
Confidence            4466677776666667777777788999988876655544 3566777788889987

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.06  E-value=0.00016  Score=59.09  Aligned_cols=144  Identities=13%  Similarity=0.058  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCccccHH
Q 020212           46 NAAISYMACAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLK  119 (329)
Q Consensus        46 l~~~~~~~~s~~~~~~nK~il~~-----~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  119 (329)
                      ..++...++...-....|..+++     .+.+ +..+..+....+.+.+.+.... +..+..+... +. ...+...+.+
T Consensus         3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~-~~-~~~~~~~~~~   79 (153)
T PF03151_consen    3 ILALASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFS-EI-FGEELSSDPN   79 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-Hh-hhhhhcchHH
Confidence            33444445555555677887776     4554 5666666666676666655432 2211110000 00 0000001224


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      .+..++..+++....++..+..+++++.-.++++.....+++.+++.++++|+++..++.++++.++|+.+..
T Consensus        80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            4555666677788889999999999999999999999999999999999999999999999999999997643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.03  E-value=0.0001  Score=66.84  Aligned_cols=116  Identities=10%  Similarity=0.080  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020212          203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF  282 (329)
Q Consensus       203 ~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (329)
                      +++.+++++++|...+..||..+++  ++.  .++....+.+.+.++....... ..+..   .+...+..++..++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQ-VGWSR---LPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhccc-CCCCC---cchhhHHHHHHHHHHHH
Confidence            5788999999999999999887642  333  4555566666666654432110 01111   11223445666777777


Q ss_pred             HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          283 FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       283 ~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ....+.+.+.++.++...+++.+..|+++.++|++++|| +.++.
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e-~~~~~  118 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGE-TLSPL  118 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcC-CCCHH
Confidence            777788889999999999999999999999999999997 77653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.03  E-value=0.00018  Score=65.75  Aligned_cols=75  Identities=13%  Similarity=0.118  Sum_probs=65.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       117 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      +++.+..++..++...+..+++++++++.+++..+.+.++.|++..++++++++|+++..++.+.++++.|+.+.
T Consensus       211 ~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        211 SLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            345555555555555667889999999999999999999999999999999999999999999999999999764

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.86  E-value=0.00076  Score=61.75  Aligned_cols=77  Identities=12%  Similarity=0.043  Sum_probs=65.5

Q ss_pred             cHHHHHHHHHHHHH-HHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          117 PLKTLMHTLPLAVA-YLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       117 ~~~~~~~~~~~~l~-~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      +.+.+..++-.+++ ..+...+++.++++.+.+....+..+.|++..++++++++|+++..++.+.+++++|+.+...
T Consensus       210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            44566666666644 345667899999999999999999999999999999999999999999999999999987543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.72  E-value=0.00046  Score=63.21  Aligned_cols=145  Identities=17%  Similarity=0.119  Sum_probs=92.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCccccHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTL  121 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (329)
                      .|.++++...++........|....+.+++ |..++.+++..+.+.+.+.... ........+..+   ... .......
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~---~~~-~~~~~~~  219 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ---AIS-GVNVTKI  219 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH---hhc-ccCchHH
Confidence            465556655555555566778777632333 6678899998888776666442 111100000000   000 0000011


Q ss_pred             HH-HHHHHH-HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          122 MH-TLPLAV-AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       122 ~~-~~~~~l-~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      .. .+..+. .+...+...+.+++++++..+++.....|+++.++++++++|+++..++++.+++++|+.+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            11 112222 333333566789999999999999999999999999999999999999999999999998854

specificities overlap.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.65  E-value=0.02  Score=53.14  Aligned_cols=265  Identities=11%  Similarity=0.047  Sum_probs=143.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHH-HHccccccccCCCCccCCCCCccccHHH
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFL-RRWKIINFTMGDSLMTSDSSSTFVPLKT  120 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (329)
                      .-+++++++-+.|..+...-.|. ..+.  ++..+ -....+++.+++... ..++...+.+.         -...+.+.
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w--~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~---------~~~~~~~~   72 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKKW--SWETM-WSVGGIFSWLILPWLIAALLLPDFWAY---------YSSFSGST   72 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCCC--chhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHH---------HHhcCHHH
Confidence            45677777777777776666676 4433  33222 112333444433311 11111111100         00123455


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhCccc---C----cchhhhhhHhhhhhhhee
Q 020212          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKY---T----PPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       121 ~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~-~~p~~~~i~~~~~~~e~~---~----~~~~~~l~l~~~Gv~l~~  192 (329)
                      +..-+..|+++..++.....+.+|+.+|...-+.. +.-++..++..++++|-.   +    .....+++++++|+.+.+
T Consensus        73 ~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s  152 (345)
T PRK13499         73 LLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVG  152 (345)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence            66667778899999999999999999998775544 677778888888888643   2    234578888889998854


Q ss_pred             c----cCc---------ccchhhHHHHHHHHHHHHHHH-------HHHHHhhcCCCCChhhHHHHHHH---HHHHHHH-H
Q 020212          193 A----RDL---------SFDFFGYAVVFLANITTAIYL-------ATIARIGKSSGLNSFGLMWCNGV---ICGPLLL-L  248 (329)
Q Consensus       193 ~----~~~---------~~~~~G~~~~l~s~~~~A~~~-------v~~k~~~~~~~~~~~~~~~~~~~---~~~~~l~-~  248 (329)
                      .    .|.         +....|++++++|.+.++.|.       ...+.. .+.+.++.....-+..   ++....- +
T Consensus       153 ~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~~~n~~  231 (345)
T PRK13499        153 RAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGAITNLG  231 (345)
T ss_pred             HhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            4    222         123679999999999999999       433322 1123444433332222   3333222 2


Q ss_pred             HHHH---h-cchhhhhcCCCCcc--hHHHHHHHHHHHHHHHHHHHHHHHhhccchh----hHHHhhhhHHHHHHHHHHHh
Q 020212          249 WTFL---R-GDLETTINFPYLLS--PGFLVVLCFSCILAFFLNYSIFLNTTLNSAV----TQTICGNLKDLFTIGLGWIL  318 (329)
Q Consensus       249 ~~~~---~-g~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~----~~sv~~~l~~i~~~~~~~~~  318 (329)
                      ++..   . +++....++.....  ..-.....+.|++=...++....+-++.+..    .+.+-..+.-+++.+-|. +
T Consensus       232 ~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~  310 (345)
T PRK13499        232 FCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-V  310 (345)
T ss_pred             HHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-h
Confidence            2221   1 11111111111000  1112333444554444555555555555332    222443666688888888 4


Q ss_pred             hCC
Q 020212          319 FGG  321 (329)
Q Consensus       319 fge  321 (329)
                      +||
T Consensus       311 lkE  313 (345)
T PRK13499        311 LKE  313 (345)
T ss_pred             hhh
Confidence            887

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.59  E-value=0.00037  Score=55.44  Aligned_cols=69  Identities=16%  Similarity=0.241  Sum_probs=60.7

Q ss_pred             HHHH-HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHH--HhCcccCcchhhhhhHhhhhhhheec
Q 020212          125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYF--LAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       125 ~~~~-l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~--~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      +..+ +++.+..++.++++++.+++.+..+.+..+.++.+.++.  ++||+++++++++++++++|+.+...
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            4445 467888899999999999999999999998888888875  79999999999999999999988654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.45  E-value=0.0035  Score=58.77  Aligned_cols=146  Identities=14%  Similarity=0.061  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCchHHHHHHHHHHHHHHHHHHHHcc-ccccccC-CCCccCCCCCc
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYN-----FPCANVITLLQMISSCSFLYFLRRWK-IINFTMG-DSLMTSDSSST  114 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~-----f~~p~~l~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~  114 (329)
                      ..|.+.+++-.++...-.+..|..+++++     .+ +..+..++..++.+++.+..... ..+.... ....   ....
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~---~~~~  268 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYT---ANMT  268 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh---hccc
Confidence            34666666666666666777888887542     22 33455566777777666554321 1000000 0000   0000


Q ss_pred             cccH-HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          115 FVPL-KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       115 ~~~~-~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      ...+ .-+..++..++.+.+.+.+.+.++++++...+++...+.|+++.++++++++|++++.++++.+++++|+.+.
T Consensus       269 ~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        269 NYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            0111 1111222333455555556668999999999999999999999999999999999999999999999999874

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.41  E-value=0.00065  Score=53.18  Aligned_cols=68  Identities=10%  Similarity=0.172  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       125 ~~~~l~~~~~~~~~~~al~~~~vs~~~~l-~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      ...-+++..+.++...+++++|++.+..+ ....-+.+.+.+.+++||++++.+++++.++++|++...
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence            44456788889999999999999988877 468999999999999999999999999999999998753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.41  E-value=0.0041  Score=56.75  Aligned_cols=127  Identities=16%  Similarity=0.097  Sum_probs=90.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHH----HHHHHHHHHHHccccccccCCCCccCCCCCcccc
Q 020212           42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMI----SSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVP  117 (329)
Q Consensus        42 ~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (329)
                      ++++.+.+.-.++.......+|..-  +   .|...++.|..    .+.++.... +  + + +   +          ..
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~--~---~~~~~~~~~~~g~~~~~~~~~~~~-~--~-~-~---~----------~~  207 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFG--V---DGLSVLLPQAIGMVIGGIIFNLGH-I--L-A-K---P----------LK  207 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcC--C---CcceehhHHHHHHHHHHHHHHHHH-h--c-c-c---c----------hH
Confidence            4677777777777766677788652  2   35556555554    333322222 1  0 0 0   0          11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchh----hhhhHhhhhhhhe
Q 020212          118 LKTLMHTLPLAVAYLLYMVVSVESVR-GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVA  191 (329)
Q Consensus       118 ~~~~~~~~~~~l~~~~~~~~~~~al~-~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~----~~l~l~~~Gv~l~  191 (329)
                      .+.....+..|++......++..+++ +.+++.+.++.+.-|+...+++++++||+.+++++    .+.++++.|+.+.
T Consensus       208 ~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       208 KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence            23334445577777777888889999 99999999999999999999999999999999999    9999999999774

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.37  E-value=0.0026  Score=56.73  Aligned_cols=124  Identities=15%  Similarity=0.172  Sum_probs=96.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHH
Q 020212          198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFS  277 (329)
Q Consensus       198 ~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~  277 (329)
                      .+..|+++++.+-+.++..-.+.|-+ +  +.++.|+..|-...+.++++......+.+.+..+  ...++.-+..+..+
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~   78 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALT   78 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHH
Confidence            44689999999999999999998776 4  5699999999999999988877766666655444  23345445555555


Q ss_pred             HHHHHHHHHHH-HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          278 CILAFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       278 ~~~~~~~~~~~-~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ++.-. .|... .++...-.....|.=-++.|.+.+++|.++++| .++..+
T Consensus        79 a~li~-~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkE-rls~~Q  128 (293)
T COG2962          79 ALLIG-LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKE-RLSRLQ  128 (293)
T ss_pred             HHHHH-HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHh-hccHHH
Confidence            55433 45554 578999999999999999999999999999998 877643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.35  E-value=0.011  Score=53.07  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=66.3

Q ss_pred             cHHHHHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          117 PLKTLMHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       117 ~~~~~~~~~~~~l~~~-~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      +.+++......+++.. ....+.+.++++.+++....+..+.|++..++++++++|+++..++.+.++++.|+.+..
T Consensus       210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~  286 (292)
T COG0697         210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS  286 (292)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence            3456666667776554 588899999999999999999999999999999999999999999999999999998754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.34  E-value=0.0068  Score=55.62  Aligned_cols=140  Identities=11%  Similarity=0.099  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-cccccccCCCCccCCCCCccccHHHHH
Q 020212           44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        44 ~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      |..+++++.++........|.++++++.+ +..+.++....+.+........ ...+..+.-+       -.....+.+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~-------f~~~~p~~~~  226 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIR-------FISAHPSVLL  226 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHH-------HHHHhHHHHH
Confidence            88888888888888888999999988765 4556666666666654444332 0001000000       0001123556


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      .++..++....++.+-+...+..+.-..+++..+.-+++.+++.++.++++++.+|.|+++.+.|..+-
T Consensus       227 ~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~  295 (303)
T PF08449_consen  227 YLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY  295 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence            667777777788888888899999999999999999999999999999999999999999999999874

; GO: 0055085 transmembrane transport

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.32  E-value=0.0016  Score=58.73  Aligned_cols=192  Identities=12%  Similarity=0.016  Sum_probs=112.1

Q ss_pred             HHHHH-HHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee-c-c-Ccc--
Q 020212          124 TLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-A-R-DLS--  197 (329)
Q Consensus       124 ~~~~~-l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~-~-~~~--  197 (329)
                      ++..| +.+.++-..++.|+.+.|.+..+-+-+++.+.-++++..++|||.++.-.+++.+.++|-.+.. . + +.+  
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            34456 4678899999999999999999999999999999999999999999999999999999996632 2 1 111  


Q ss_pred             ---------cchhhHH-HHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHH--hcc-hhh-hhcCC
Q 020212          198 ---------FDFFGYA-VVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGD-LET-TINFP  263 (329)
Q Consensus       198 ---------~~~~G~~-~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~-~~~-~~~~~  263 (329)
                               .++ |++ +..+-.+...+-....++   +  +.....+.|..+.+....+-....  .|+ ... ....+
T Consensus       146 t~~el~~~~~~~-~Fliy~~~iil~~~il~~~~~p---~--~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  146 SVEEVWELATEP-GFLVYVIIIILIVLILIFFYAP---R--YGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             cHHHHHHHhcCc-cHHHHHHHHHHHHHHHheeecc---c--ccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence                     111 221 111111111111111221   1  111222333333332221100000  011 000 01122


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhh-hHHHHHHHHHHHhhCC
Q 020212          264 YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGN-LKDLFTIGLGWILFGG  321 (329)
Q Consensus       264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~-l~~i~~~~~~~~~fge  321 (329)
                      ....+..|..++....+......-.+++++...+..++...+ +=+.++++.|.++|+|
T Consensus       220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fke  278 (335)
T KOG2922|consen  220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKE  278 (335)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            334455666666666666555555577888776665555444 4677788888888876

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.20  E-value=0.0019  Score=49.91  Aligned_cols=67  Identities=12%  Similarity=0.207  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       126 ~~~l~~~~~~~~~~~al~~~~vs~~~~l~~-~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      ..-+++.+..++...+++++|++.+..+-. ..-+.+.+.+++++||+.++.++.++.++++|++...
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            334577888888999999999999888854 7888999999999999999999999999999998753

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.15  E-value=0.0021  Score=49.07  Aligned_cols=67  Identities=16%  Similarity=0.171  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       125 ~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~-~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      ...-+++..+.++...++|++|++.+-.+=. ...+.+.+.+++++||+.++.+++++.++++|++..
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3444677888889999999999997666555 888999999999999999999999999999999874

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.13  E-value=0.0022  Score=49.37  Aligned_cols=68  Identities=18%  Similarity=0.211  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       124 ~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~-~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      ....-+++..+.++...++|++|++.+-.+= ....+.+.+.+.+++||++++.++.++.+++.|++..
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3344456778888999999999999766554 4888899999999999999999999999999999763

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.10  E-value=0.0023  Score=48.61  Aligned_cols=69  Identities=13%  Similarity=0.138  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHH-HHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTT-LRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       124 ~~~~~l~~~~~~~~~~~al~~~~vs~~~~-l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      ....-+++..+..+...+++++|++.+-. -.-...+.+.+.+++++||+.+..+++++.++++|++...
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            34445677888889999999999997654 4558888999999999999999999999999999997643

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.69  E-value=0.043  Score=49.04  Aligned_cols=67  Identities=18%  Similarity=0.176  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchh----hhhhHhhhhhhh
Q 020212          124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFV  190 (329)
Q Consensus       124 ~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~----~~l~l~~~Gv~l  190 (329)
                      -+.-|+++..++++...|.+...++.+-.+..+.++...+.+.+++||+-+++++    .+++++++|.++
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            4556899999999999999999999999999999999999999999999888765    455555555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.58  E-value=0.0089  Score=44.69  Aligned_cols=57  Identities=14%  Similarity=0.190  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhCcccCcchhhhhhHh
Q 020212          128 AVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLI  184 (329)
Q Consensus       128 ~l~~~~~~~~~~~al~~~~vs~~~~l-~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~  184 (329)
                      -.++..+.++...+++++|++.+-.+ .....+.+.+.+.+++||+.++.++.++.++
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34788888999999999999987554 5699999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.41  E-value=0.032  Score=43.13  Aligned_cols=85  Identities=19%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHHH-HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHH
Q 020212          238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF-FLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGW  316 (329)
Q Consensus       238 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~  316 (329)
                      ...++.+.+..+....++..+........+   +..++..|+++. ..+...+.+.++.++ .+++...+.|+++.++|+
T Consensus         4 r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    4 RYLFSVLFLLIILLIRGRLRDLFRALRRKP---WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHccHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence            344555555555555555433221110111   334555566555 444444678999985 888999999999999999


Q ss_pred             HhhCCcCcccc
Q 020212          317 ILFGGLPFDFV  327 (329)
Q Consensus       317 ~~fge~~~~~~  327 (329)
                      ++||| +++..
T Consensus        80 ~~~~e-r~~~~   89 (113)
T PF13536_consen   80 LFFKE-RLSPR   89 (113)
T ss_pred             HHhcC-CCCHH
Confidence            99997 77653

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.11  E-value=0.018  Score=44.42  Aligned_cols=71  Identities=11%  Similarity=0.142  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH-hHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~-~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      +++..+|.. ++..+.+.+++.+...++|.+.-+. +++=+||++.++++.+|..+++++.+..+++.|+.+.
T Consensus        41 n~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            344555554 3444556888899999999888885 8899999999988877778999999999999999763

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.08  E-value=0.0092  Score=52.58  Aligned_cols=73  Identities=11%  Similarity=-0.010  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhh
Q 020212          118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (329)
Q Consensus       118 ~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l  190 (329)
                      ++|+.-+..+|++..+++.+-..++|.--++-..+.+.+-.++..+...+++|+.+++..|.+.+.++...+.
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~  322 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW  322 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence            4556667788999999999999999999999999999999999999999999999999999988777655543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.04  E-value=0.00046  Score=59.84  Aligned_cols=192  Identities=11%  Similarity=0.112  Sum_probs=122.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHh-HHHHHHHHHHHHHhCcccCcchh----hhhhHhhhhhhhe
Q 020212          117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVA  191 (329)
Q Consensus       117 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~-~~p~~~~i~~~~~~~e~~~~~~~----~~l~l~~~Gv~l~  191 (329)
                      +.+.+.--+.-|.++..++...+.|.+++.+|-+.-+.. +.-+-+.+++.+.++|..+..+.    .++++++.|+.+.
T Consensus        55 T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lT  134 (288)
T COG4975          55 TLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLT  134 (288)
T ss_pred             chhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEe
Confidence            445455555666789999999999999998887665444 56677788898999999877765    5788899999997


Q ss_pred             eccCc--------ccchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCC
Q 020212          192 GARDL--------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFP  263 (329)
Q Consensus       192 ~~~~~--------~~~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~  263 (329)
                      +..|.        +.-..|....+.|.+.|..|.+..|..    +.|.++...-+..-....-+.+....+|...  +  
T Consensus       135 s~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~~~--~--  206 (288)
T COG4975         135 SKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEKRF--N--  206 (288)
T ss_pred             eeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccccch--H--
Confidence            66553        112468999999999999999988765    2466665554443332322333333333211  1  


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCC
Q 020212          264 YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGG  321 (329)
Q Consensus       264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge  321 (329)
                          -. .+.-...|+.=-..|...+.+.++.+-.+.=-..-+.-+.+++-|.+++||
T Consensus       207 ----K~-t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e  259 (288)
T COG4975         207 ----KY-TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE  259 (288)
T ss_pred             ----HH-HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec
Confidence                11 123334455444456665555554443332223344567788888888887

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.99  E-value=0.25  Score=45.86  Aligned_cols=57  Identities=19%  Similarity=0.274  Sum_probs=51.1

Q ss_pred             HhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          137 VSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       137 ~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      .....+++.++....+.-.++.++.+++..++.|+++++..++|.+++++|.++...
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~  305 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNL  305 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEc
Confidence            446678889998899988999999999999999999999999999999999988644

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.55  E-value=0.32  Score=42.82  Aligned_cols=130  Identities=14%  Similarity=0.109  Sum_probs=81.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      -++...+.-+.|...-++..|.+=+.-  +.+ .=...-+.+++++..++....-      .        +...++.-+.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~-~g~a~gm~vAaviv~Pig~~~a------g--------~~l~~p~ll~  210 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRAE--HGT-AGVAVGMLVAALIVLPIGAAQA------G--------PALFSPSLLP  210 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcccC--CCc-hHHHHHHHHHHHHHhhhhhhhc------c--------hhhcChHHHH
Confidence            345555555555555445555554221  223 2345566666666555543110      0        0112222222


Q ss_pred             HHHHHHHHHHH-HHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhh
Q 020212          123 HTLPLAVAYLL-YMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF  189 (329)
Q Consensus       123 ~~~~~~l~~~~-~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~  189 (329)
                      .-+.++++... =..+...++++.|.+.+.++.++-|.+-.+...++++|.++..||.++..++++..
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            22333333222 23488899999999999999999999999999999999999999999988876654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.25  E-value=0.45  Score=38.28  Aligned_cols=107  Identities=20%  Similarity=0.099  Sum_probs=77.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHHH
Q 020212          202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA  281 (329)
Q Consensus       202 G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~  281 (329)
                      ..++++++..+-+++..+.-++.++.+ +++...+.+...+.+.+.......++. +..+   ..+.. | +..+.|+++
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~---~~~~p-~-w~~lGG~lG   74 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLAS---LSSVP-W-WAYLGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccch---hccCC-h-HHhccHHHH
Confidence            357889999999999999999887543 599999999999988887776666543 1111   11111 2 233488888


Q ss_pred             HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHH
Q 020212          282 FFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLG  315 (329)
Q Consensus       282 ~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~  315 (329)
                      ...-.+....+.+.++...........+...++=
T Consensus        75 ~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i  108 (138)
T PF04657_consen   75 VFFVLSNIILVPRLGAALTTILIVAGQLIASLLI  108 (138)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            8888888889999999998887777666555443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.06  E-value=1.3  Score=40.17  Aligned_cols=141  Identities=9%  Similarity=0.019  Sum_probs=92.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHH
Q 020212           41 TRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT  120 (329)
Q Consensus        41 ~~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (329)
                      +..|++.+..|...=.......+.++.+++.+ +..+.+.--++.++...........-++   .++.   -  ..+++-
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~---av~F---~--~~hp~~  240 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLP---AVSF---I--KEHPDV  240 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCch---HHHH---H--HcChhH
Confidence            45677777777665554455556677766543 2223333222333332222111110000   0000   0  022366


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhh
Q 020212          121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (329)
Q Consensus       121 ~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l  190 (329)
                      ++.++.++.+.+.++.+-++.++.-..=..+++.-+.=++..+++.+..+.+.++.+|.+..+.+.|...
T Consensus       241 ~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  241 AFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             HHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            7889999999999999999999887777778888888899999999999999999999999999988865

>PRK13499 rhamnose-proton symporter; Provisional

Probab=93.63  E-value=2.3  Score=39.62  Aligned_cols=69  Identities=13%  Similarity=0.016  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchhHHHH---HH-hHHHHHHHHHHHHHhCcccC------cchhhhhhHhhhhhhheecc
Q 020212          125 LPLAVAYLLYMVVSVESVRGVNVPMYTT---LR-RTTVAFTMIMEYFLAGQKYT------PPVVGSVGLIILGAFVAGAR  194 (329)
Q Consensus       125 ~~~~l~~~~~~~~~~~al~~~~vs~~~~---l~-~~~p~~~~i~~~~~~~e~~~------~~~~~~l~l~~~Gv~l~~~~  194 (329)
                      ..-|+.+....+++..+-+..+.+...+   +. ++..++-.+... ++||+-+      +..+.+++++++|.++...+
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            5556677787888888887776665555   66 666666666666 6898766      34467778888888775544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=93.13  E-value=1.8  Score=34.35  Aligned_cols=101  Identities=10%  Similarity=0.037  Sum_probs=63.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHHHH
Q 020212          201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL  280 (329)
Q Consensus       201 ~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (329)
                      .|+++.+.+.++.+.-.++.|+-.++.  ...+.... . .  .  .....              .++   ...+..|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~--g~~~~~~~-~-~--~--~~~~~--------------~~p---~~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRL--PLLSHAWD-F-I--A--ALLAF--------------GLA---LRAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhC--CCccchhH-H-H--H--HHHHH--------------hcc---HHHHHHHHH
Confidence            478999999999999999999876643  22221110 0 0  0  00000              001   113344454


Q ss_pred             HHHHHHHH-HHHhhccchhhHHHhhhhHHHHHHHHHHH--hhCCcCcccc
Q 020212          281 AFFLNYSI-FLNTTLNSAVTQTICGNLKDLFTIGLGWI--LFGGLPFDFV  327 (329)
Q Consensus       281 ~~~~~~~~-~~~i~~~sa~~~sv~~~l~~i~~~~~~~~--~fge~~~~~~  327 (329)
                      ++...+.. ..++++.+.......-....+...+.++.  +||| ++|+.
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E-~ls~~  105 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE-TFSLK  105 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCHH
Confidence            54444443 56799999999888888887778777874  8997 98875

>TIGR00803 nst UDP-galactose transporter

Probab=93.09  E-value=1.1  Score=38.97  Aligned_cols=65  Identities=11%  Similarity=0.042  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhh
Q 020212          126 PLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (329)
Q Consensus       126 ~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l  190 (329)
                      ...+..+....+-...++|.+.....+...+.++++.+++.++++++++..++.+..+.+.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33445566667788899999999999999999999999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=92.70  E-value=1.3  Score=34.22  Aligned_cols=39  Identities=10%  Similarity=-0.102  Sum_probs=34.0

Q ss_pred             HHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          289 FLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       289 ~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ..++++.+.......-.+.++.+.++|+++||| ++|+.+
T Consensus        55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E-~ls~~~   93 (111)
T PRK15051         55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHE-PVSPRH   93 (111)
T ss_pred             HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHH
Confidence            457899999888888889999999999999998 888753

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=91.41  E-value=3.4  Score=38.22  Aligned_cols=124  Identities=10%  Similarity=0.070  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC--CCChhhHHHHHHHHHHHHHHHHHHHhcc--hhhhh---cCCCCcchHHHHHHH
Q 020212          203 YAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFLRGD--LETTI---NFPYLLSPGFLVVLC  275 (329)
Q Consensus       203 ~~~~l~s~~~~A~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~~~---~~~~~~~~~~~~~l~  275 (329)
                      ++..++..+-.+......|.-.+++  ++.+.+..+.+=.+-.++.....+....  .....   ....+.++....-+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            3444445555555555556554332  4666777666666655555544443310  11111   111122232234555


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          276 FSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       276 ~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      .-+++=...|...+.+..+.+|.++++...+|-..+.+++++++++ .+++.
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~r-kLs~~  147 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRR-KLSRL  147 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhh-hhhHH
Confidence            6666667777766888999999999999999999999999999986 77764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=90.96  E-value=7.1  Score=31.32  Aligned_cols=125  Identities=12%  Similarity=0.124  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccc-ccccCCCCccCCCCCccccHHHHHHHHHHH
Q 020212           50 SYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKII-NFTMGDSLMTSDSSSTFVPLKTLMHTLPLA  128 (329)
Q Consensus        50 ~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (329)
                      .-++.-.....+|-.+-+..+  .|..=++.-+..+.+.+.++....+. +.++          -+..||    +.+.-|
T Consensus         8 ~aG~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~----------~~~~p~----w~~lGG   71 (138)
T PF04657_consen    8 LAGALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLAS----------LSSVPW----WAYLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccch----------hccCCh----HHhccH
Confidence            334444444555655555443  46667777777777776666554332 1110          011222    233356


Q ss_pred             HHHHHHHHHhhhhhcccchhHHHHHHhHHH-HHHHHHHHH----HhCcccCcchhhhhhHhhhhhhh
Q 020212          129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTV-AFTMIMEYF----LAGQKYTPPVVGSVGLIILGAFV  190 (329)
Q Consensus       129 l~~~~~~~~~~~al~~~~vs~~~~l~~~~p-~~~~i~~~~----~~~e~~~~~~~~~l~l~~~Gv~l  190 (329)
                      ++-.....+...+...+.++....+.-+.= +.-++++.+    ..|++++++|+.+++++++|+.+
T Consensus        72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            777888889999999999988887766544 444555553    24678899999999999999864

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.66  E-value=1.1  Score=41.18  Aligned_cols=141  Identities=14%  Similarity=0.115  Sum_probs=95.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHHc--cccccccCCCCccCCCCCcc
Q 020212           41 TRRGANAAISYMACAVLLVMFNKAALS--SYNFPCANVITLLQMISSCSFLY-FLRRW--KIINFTMGDSLMTSDSSSTF  115 (329)
Q Consensus        41 ~~~~~l~~~~~~~~s~~~~~~nK~il~--~~~f~~p~~l~~~r~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~  115 (329)
                      ...|...+..+......-.+..|.++.  +++.+ +..+..++--++.+.+. +....  +. ++. . .      ....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~-~~~-~-~------~~~~  230 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGN-KFV-G-F------LTAP  230 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhccc-cee-e-e------eccc
Confidence            457788888888888888888888884  45555 45566666666666665 43221  11 100 0 0      0000


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhee
Q 020212          116 VPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG  192 (329)
Q Consensus       116 ~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  192 (329)
                      .+.. ...+...+++..+.+...+..+.+++.=++++.-..-=+++...++++++++.++.+.++..++++|+.+..
T Consensus       231 ~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  231 WFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             cchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            1222 223344446666677788888999988888888887777788888888899889999999999999998853

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=89.38  E-value=1.1  Score=39.64  Aligned_cols=57  Identities=18%  Similarity=0.126  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       271 ~~~l~~~~~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      .+....-+++=...|...+.++++++|.++.++...|.+.+.+++++++|. +++..+
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r-~ls~~q   73 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKR-RLSRRQ   73 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHc-ccchhh
Confidence            455667777777888888999999999999999999999999999999986 887654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=88.66  E-value=3.8  Score=37.37  Aligned_cols=143  Identities=14%  Similarity=0.050  Sum_probs=88.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-ccccccccCCCCccCCCCCccccHH
Q 020212           41 TRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKIINFTMGDSLMTSDSSSTFVPLK  119 (329)
Q Consensus        41 ~~~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  119 (329)
                      +.+|..|+..+..+........|.....-++. -.-+..+..+.+...+.+... ++..+  ...     ...+...+..
T Consensus       155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~-----~~~~~~~~~~  226 (314)
T KOG1444|consen  155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELD--ALS-----LNFDNWSDSS  226 (314)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchH--HHH-----hhcccccchh
Confidence            34567888888888888777888777644332 122444444455444444432 22111  000     0001111122


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhhe
Q 020212          120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA  191 (329)
Q Consensus       120 ~~~~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~  191 (329)
                      .+..+..-+++..+-.++...+.+..|+-.+++.....-..+.+...++.++..++....++.+.++|-++.
T Consensus       227 ~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y  298 (314)
T KOG1444|consen  227 VLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY  298 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence            334444445666666788889999999888888887777777777777777778888888888888887764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=85.91  E-value=5.4  Score=34.67  Aligned_cols=139  Identities=11%  Similarity=-0.025  Sum_probs=85.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccccccCCCCccCCCCCccccHHHHH
Q 020212           43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLM  122 (329)
Q Consensus        43 ~~~l~~~~~~~~s~~~~~~nK~il~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (329)
                      .|.+|+..-+..+....+..|-...-.+|.. ..-.++.-+.+..++..+...-..+    ++.++    ....+-..+.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edw----s~~n~----annl~~d~l~  225 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDW----SPGNL----ANNLSVDSLM  225 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccC----Ccchh----hcCCChHHHH
Confidence            4566666666666666666665543223332 2234555556665555554432111    11010    0112223344


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhh
Q 020212          123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV  190 (329)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l  190 (329)
                      .++.-|++-.+..++.-++++-++...+.+.-++.-....+-+.+++++..++..+.++++.++...+
T Consensus       226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            55666677777778899999999999999999998888888888888888888888777766654433

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=81.82  E-value=6  Score=36.25  Aligned_cols=101  Identities=18%  Similarity=0.174  Sum_probs=65.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcCCCCcchHHHHHHHHHH
Q 020212          199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC  278 (329)
Q Consensus       199 ~~~G~~~~l~s~~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~  278 (329)
                      ...|..+++.++++.+...++.||-..+.+.++....                   +    ...+...++.+|..++.. 
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-------------------~----~~~~~l~~~~W~~G~~~~-   60 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-------------------S----GGRSYLRRPLWWIGLLLM-   60 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-------------------c----hhhHHHhhHHHHHHHHHH-
Confidence            4579999999999999999998886543322111100                   0    000111222223333322 


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHHHHhhCCcCcccc
Q 020212          279 ILAFFLNYSIFLNTTLNSAVTQTICGNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       279 ~~~~~~~~~~~~~i~~~sa~~~sv~~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      .++-..+   +.++...+++.+++.+.+.-+...+++..++|| +++..
T Consensus        61 ~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e-~~~~~  105 (300)
T PF05653_consen   61 VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGE-KLTRR  105 (300)
T ss_pred             hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcc-cchHh
Confidence            2343344   347888899999999999999999999999997 87754

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=80.75  E-value=12  Score=35.03  Aligned_cols=67  Identities=10%  Similarity=0.055  Sum_probs=56.2

Q ss_pred             HHHHHHHHhhhhhcccchhHHHHHHhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheeccCc
Q 020212          130 AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL  196 (329)
Q Consensus       130 ~~~~~~~~~~~al~~~~vs~~~~l~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~  196 (329)
                      ...+.=+++-.|.-.++.=..++--+.+.+..++...++.++.+++..+++.+.+++|.+.+...+.
T Consensus       327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            3445557888888888888888888889999999999999999999999999999999988765443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=80.75  E-value=5  Score=29.72  Aligned_cols=39  Identities=13%  Similarity=0.083  Sum_probs=20.3

Q ss_pred             HHHhhccchhh-HHHhhhhHHHHHHHHHHHhhCCcCccccC
Q 020212          289 FLNTTLNSAVT-QTICGNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       289 ~~~i~~~sa~~-~sv~~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ..++|+.+... +.+..-+..+.+.+.|+++||| ++|+.+
T Consensus        47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E-~~s~~~   86 (93)
T PF00893_consen   47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE-SLSLSK   86 (93)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHH---------
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHH
Confidence            45678777644 4777788999999999999997 998754

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	329
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.28
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.11
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	95.09
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	93.5

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.28  E-value=2.2e-06  Score=65.37  Aligned_cols=66  Identities=11%  Similarity=0.220  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          128 AVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       128 ~l~~~~~~~~~~~al~~~~vs~~~~l-~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      .+++.+..++...++++.|++.+..+ ..+.|+++.+.+.+++||++++.++.++.++++|++....
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            35678888899999999999999888 8999999999999999999999999999999999987544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.11  E-value=3.5e-06  Score=66.63  Aligned_cols=66  Identities=11%  Similarity=0.220  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhhhhhcccchhHHHHH-HhHHHHHHHHHHHHHhCcccCcchhhhhhHhhhhhhheec
Q 020212          128 AVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA  193 (329)
Q Consensus       128 ~l~~~~~~~~~~~al~~~~vs~~~~l-~~~~p~~~~i~~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  193 (329)
                      .+++.+..++.+.++++++++.+..+ ..+.|+++.++++++++|++++.++++++++++|+++...
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            35678888999999999999988888 9999999999999999999999999999999999988543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=95.09  E-value=0.027  Score=44.14  Aligned_cols=42  Identities=12%  Similarity=0.173  Sum_probs=26.4

Q ss_pred             HHHHHHhhccchhhHHHh-hhhHHHHHHHHHHHhhCCcCccccC
Q 020212          286 YSIFLNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFVS  328 (329)
Q Consensus       286 ~~~~~~i~~~sa~~~sv~-~~l~~i~~~~~~~~~fge~~~~~~~  328 (329)
                      ++...++++.++.....+ ..+.|+.++++|+++||| ++++.+
T Consensus        45 ~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE-~ls~~~   87 (137)
T 2i68_A           45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLPA   87 (137)
T ss_dssp             HHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------C
T ss_pred             HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCC-CCCHHH
Confidence            344568999999988777 899999999999999998 988764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=93.50  E-value=0.17  Score=37.86  Aligned_cols=40  Identities=13%  Similarity=0.138  Sum_probs=34.2

Q ss_pred             HHHHHhhccchhhHHHh-hhhHHHHHHHHHHHhhCCcCcccc
Q 020212          287 SIFLNTTLNSAVTQTIC-GNLKDLFTIGLGWILFGGLPFDFV  327 (329)
Q Consensus       287 ~~~~~i~~~sa~~~sv~-~~l~~i~~~~~~~~~fge~~~~~~  327 (329)
                      ....++|+.+..+...+ ..+.++.++++|+++||| ++|+.
T Consensus        46 ~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E-~~s~~   86 (110)
T 3b5d_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ-RLDLP   86 (110)
T ss_pred             HHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC-CCCHH
Confidence            33557999999888777 899999999999999998 88865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00