Citrus Sinensis ID: 020283

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccEEEEEHHHHHHHHHEEEEEEcccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHccccEEEEEEccccHcccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccHEHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGEWVIGAFINLVGSIAINFGtnllklghierekhstldsdgtngkhslkpIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVsfgnhqspvytpeqlaekysnITFLVYCLILIFIVAIYHYIYRKGenllavsgqdnrywrmLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Flexible Loop (DISEMBL)
MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHstldsdgtngKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFrsnvihvpvfcigsrkkylslfy
Low Complexity Region (SEG)
MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Disordered region (IsUnstruct)
***WVIGAFINLVGSIAINFGTNLLKLGHIE****************SLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLF*
Disordered Region (DISOPRED)
*GEWVIGAFINLVGSIAINFGTNLLKLGHI******************LKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQS**YTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Disordered Region (DISEMBL)
MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Disordered Region (DISPRO)
*GEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHS********GKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSSRFNNFRSNVIHVPVFCIGSRKKYLSLFY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	328	2.2.26 [Sep-21-2011]
Q91WC7	383	NIPA-like protein 2 OS=Mu	yes	no	0.765	0.655	0.215	7e-10
Q9H841	368	NIPA-like protein 2 OS=Ho	yes	no	0.783	0.698	0.207	3e-09
Q5RD30	406	NIPA-like protein 3 OS=Po	no	no	0.774	0.625	0.226	2e-08
Q6P499	406	NIPA-like protein 3 OS=Ho	no	no	0.774	0.625	0.226	2e-08
Q3SWX0	360	Magnesium transporter NIP	no	no	0.628	0.572	0.234	2e-08
Q5R7Q3	360	Magnesium transporter NIP	no	no	0.628	0.572	0.225	1e-07
Q8N8Q9	360	Magnesium transporter NIP	no	no	0.628	0.572	0.225	1e-07
Q8BZF2	406	Magnesium transporter NIP	no	no	0.628	0.507	0.227	3e-07
Q9JJC8	359	Magnesium transporter NIP	no	no	0.643	0.587	0.2	4e-07
Q0D2K0	466	Magnesium transporter NIP	no	no	0.612	0.431	0.235	4e-06

>sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 27/278 (9%)

Query: 7   GAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFL 66
           G  + ++G++ I+   N+ K  H+   +           K   KP      W  G+L+  
Sbjct: 50  GVLLAILGNLVISISLNIQKYSHLHLAQ-----------KEHPKPYFKSVLWLSGVLLTA 98

Query: 67  LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126
           LG   NF ++G A  +L+A LG +    +   S     + +    L+       G   LV
Sbjct: 99  LGETGNFAAYGVAPITLIAPLGCMSVTGSAIISVLFLKENLRASDLLGMTLAFAGTYLLV 158

Query: 127 SFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIY-RKGENLLAVSGQDNRYW 185
           +F  + +   +   +   +    FLVY ++ I +  I  Y + RKG   + V        
Sbjct: 159 NFAPNITQAISARTVQYYFVGWQFLVYVILEILVFCILLYFHKRKGMKHIVVL------- 211

Query: 186 RMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWM 245
                     +   + S +V+  K++S ++ L+++   QL     Y ML++  ++  F +
Sbjct: 212 --------LTLVALLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIMLVIMIASCVFQV 263

Query: 246 ARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
             LN+   L+    +VP+  + +T+ +I  G +++QE+
Sbjct: 264 KFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEF 301

Mus musculus (taxid: 10090)

>sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/289 (20%), Positives = 126/289 (43%), Gaps = 32/289 (11%)

Query: 2   GEW-------VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVH 54
           G+W       + G  + ++G++ I+   N+ K  H++  +           +H  +P   
Sbjct: 38  GDWYRRNQIHLFGVLLAILGNLVISISLNIQKYSHLQLAQQ----------EHP-RPYFK 86

Query: 55  YHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVA 114
              W  G+L+  +G   NF ++G+A  +L+A LG V    +   S       +    L+ 
Sbjct: 87  SVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLG 146

Query: 115 TAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENL 174
           T     G   LV+F  + +   +   +        FL+Y ++ I I  I  Y Y++    
Sbjct: 147 TTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFYKR---- 202

Query: 175 LAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSML 234
                +  ++  +LL      +   + S +V+  K++S ++  ++ +  QL     Y M 
Sbjct: 203 -----KGMKHMVILL-----TLVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMF 252

Query: 235 LLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
           ++  ++  F +  LN+   L++   +VP+  I +T  +I  G +++QE+
Sbjct: 253 IIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEF 301

Homo sapiens (taxid: 9606)

>sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 37/291 (12%)

Query: 3   EWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI 62
           E +IGA + + G + ++   NL K  HI              G    +      +W +G+
Sbjct: 32  ENLIGALLAIFGHLVVSIALNLQKYCHIR-----------LAGSKDPRAYFKTKTWWLGL 80

Query: 63  LVFLLGNCLNFISFGYAAQSLLAALGSVQFV-SNIAFSYFVFNKMVTVKVL-------VA 114
            + LLG    F S+ +A  SL+  L +V  + S I    F+  K      L       V 
Sbjct: 81  FLMLLGELGVFASYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYILSFVG 140

Query: 115 TAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGE 172
               V+G   LV+F  +     T E +     +  FL+Y L  I++F + +Y Y  +   
Sbjct: 141 CGLAVVGTYLLVTFAPNSREKMTGENVTRHLVSWPFLLYMLVEIILFCLLLYFYKEKNAN 200

Query: 173 NLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYS 232
           N++ +                 ++   +GS +V+  K+++ +L L++    QL     Y 
Sbjct: 201 NIVVI----------------LLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYV 244

Query: 233 MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
           M +   +TA +  A L++   ++D+ LI  +  I  T+ +I  G +++ ++
Sbjct: 245 MFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDF 295

Pongo abelii (taxid: 9601)

>sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 37/291 (12%)

Query: 3   EWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI 62
           E +IGA + + G + ++   NL K  HI              G    +      +W +G+
Sbjct: 32  ENLIGALLAIFGHLVVSIALNLQKYCHIR-----------LAGSKDPRAYFKTKTWWLGL 80

Query: 63  LVFLLGNCLNFISFGYAAQSLLAALGSVQFV-SNIAFSYFVFNKMVTVKVL-------VA 114
            + LLG    F S+ +A  SL+  L +V  + S I    F+  K      L       V 
Sbjct: 81  FLMLLGELGVFASYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVG 140

Query: 115 TAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGE 172
               V+G   LV+F  +     T E +     +  FL+Y L  I++F + +Y Y  +   
Sbjct: 141 CGLAVVGTYLLVTFAPNSHEKMTGENVTRHLVSWPFLLYMLVEIILFCLLLYFYKEKNAN 200

Query: 173 NLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYS 232
           N++ +                 ++   +GS +V+  K+++ +L L++    QL     Y 
Sbjct: 201 NIVVI----------------LLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYV 244

Query: 233 MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
           M +   +TA +  A L++   ++D+ LI  +  I  T+ +I  G +++ ++
Sbjct: 245 MFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDF 295

Homo sapiens (taxid: 9606)

>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 29/235 (12%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQ-FVSNIAFSYFVFNKMVTVKVLVATA 116
           W  G+L    G   NF ++ +A  +L+  LG++   VS I  SYF  N+ + +   +   
Sbjct: 59  WWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYF-LNERLNLHGKIGCL 117

Query: 117 FIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYC-------LILIFIVAIYHYIYR 169
             +LG+  +V     +  + T  +++ K  +  F+V+        LILIF+V   H    
Sbjct: 118 LSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRH---- 173

Query: 170 KGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWF 229
                    GQ N          Y  +   +G+ SV  AK L   ++   +    L    
Sbjct: 174 ---------GQTNI-------LVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPL 217

Query: 230 TYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ 284
           T+ +LL         +  LN  L +F+  ++ P++ + +T+  I    + F+E+Q
Sbjct: 218 TWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQ 272

Acts as a selective Mg(2+) transporter.

Bos taurus (taxid: 9913)

>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 29/235 (12%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQ-FVSNIAFSYFVFNKMVTVKVLVATA 116
           W  G+L    G   NF ++ +A  +L+  LG++   VS I  SYF+ N+ + +   +   
Sbjct: 59  WWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFL-NERLNLHGKIGCL 117

Query: 117 FIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY-------CLILIFIVAIYHYIYR 169
             +LG+  +V     +  + T  +++ K  +  F+V+        LILIF+V   H    
Sbjct: 118 LSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRH---- 173

Query: 170 KGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWF 229
                    GQ N          Y  +   +G+FSV   K L   ++   +    L    
Sbjct: 174 ---------GQTNI-------LVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPL 217

Query: 230 TYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ 284
            + +LL         +  LN  L +F+  ++ P++ + +T+  +    + F+E+Q
Sbjct: 218 AWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Acts as a selective Mg(2+) transporter.

Pongo abelii (taxid: 9601)

>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 29/235 (12%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQ-FVSNIAFSYFVFNKMVTVKVLVATA 116
           W  G+L    G   NF ++ +A  +L+  LG++   VS I  SYF+ N+ + +   +   
Sbjct: 59  WWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFL-NERLNLHGKIGCL 117

Query: 117 FIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY-------CLILIFIVAIYHYIYR 169
             +LG+  +V     +  + T  +++ K  +  F+V+        LILIF+V   H    
Sbjct: 118 LSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRH---- 173

Query: 170 KGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWF 229
                    GQ N          Y  +   +G+FSV   K L   ++   +    L    
Sbjct: 174 ---------GQTNI-------LVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPL 217

Query: 230 TYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ 284
            + +LL         +  LN  L +F+  ++ P++ + +T+  +    + F+E+Q
Sbjct: 218 AWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Acts as a selective Mg(2+) transporter.

Homo sapiens (taxid: 9606)

>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 27/233 (11%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAF 117
           W  G+     G   NF ++ +A  +++  LG++  + +  FS +   + + +   +    
Sbjct: 107 WWAGMATMSAGEVANFGAYAFAPATVVTPLGALSVLISAIFSSYCLGESLNLLGKLGCVI 166

Query: 118 IVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY-------CLILIFIVAIYHYIYRK 170
            + G+  +V     +  V T  ++A K  +  F+V+       CLILIFIVA  +     
Sbjct: 167 CMAGSTVMVIHAPKEEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRY----- 221

Query: 171 GENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFT 230
                   GQ N    +L+   Y I+   +GSFSV   K L   +R        +     
Sbjct: 222 --------GQRN----ILI---YIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLP 266

Query: 231 YSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
           Y + L+   +    +  LN  L +F+  L+ P++ + +T+  + +  V F+E+
Sbjct: 267 YILSLILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEW 319

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Mus musculus (taxid: 10090)

>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/230 (20%), Positives = 101/230 (43%), Gaps = 19/230 (8%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQ-FVSNIAFSYFVFNKMVTVKVLVATA 116
           W  G+L    G   NF ++ +A  +L+  LG++   VS I  SYF+ N+ + +   +   
Sbjct: 59  WWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFL-NERLNLHGKIGCL 117

Query: 117 FIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIY--RKGENL 174
             +LG+  +V     +  + T  +++ K  +  F+V+   ++ +  I+ ++   R G+  
Sbjct: 118 LSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTN 177

Query: 175 LAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSML 234
           + V               Y  +   +G+FSV   K L   ++  ++    L     + +L
Sbjct: 178 ILV---------------YITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILL 222

Query: 235 LLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ 284
                     +  LN  L +F+  ++ P++ + +T+  +    + F+E+Q
Sbjct: 223 FSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272

Acts as a selective Mg(2+) transporter.

Mus musculus (taxid: 10090)

>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)

Query: 58  WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQ-FVSNIAFSYFVFNKMVTVKVLVATA 116
           W  G L    G   NF ++ +A  +++  LG++   +S I  SYF+   +  +  L    
Sbjct: 167 WWAGFLTMAAGEVANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKL-GCV 225

Query: 117 FIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY-------CLILIFIVAIYHYIYR 169
             V G+  +V     +  V T  ++A K  +  F+V+       CLILIF++A  +    
Sbjct: 226 ICVAGSTVMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRY---- 281

Query: 170 KGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQ----L 225
                    GQ N    +L+   Y I+   +G+FSV   K L     + + N +Q    +
Sbjct: 282 ---------GQRN----ILI---YIIICSVIGAFSVAAVKGLG----ITIKNFFQGLPVV 321

Query: 226 HSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
                Y + L+   +    +  LN  L +F+  L+ P++ + +T+  + +  + F+E+
Sbjct: 322 RHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEW 379

Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Ba(2+), Mn(2+), Sr(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity). May be a receptor for ligands (trioxilins A3 and B3) from the hepoxilin pathway.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
255543473	1198	pentatricopeptide repeat-containing prot	0.868	0.237	0.849	1e-140
224128700	444	predicted protein [Populus trichocarpa]	0.868	0.641	0.842	1e-137
356498637	441	PREDICTED: uncharacterized protein LOC10	0.865	0.643	0.832	1e-134
356559514	443	PREDICTED: uncharacterized protein LOC10	0.865	0.641	0.832	1e-134
255645549	394	unknown [Glycine max]	0.865	0.720	0.832	1e-133
449520012	444	PREDICTED: uncharacterized LOC101223129	0.871	0.644	0.811	1e-132
296082240	442	unnamed protein product [Vitis vinifera]	0.868	0.644	0.821	1e-132
388515427	442	unknown [Lotus japonicus]	0.865	0.642	0.828	1e-132
297818206	441	hypothetical protein ARALYDRAFT_484434 [	0.859	0.639	0.807	1e-132
449455764	443	PREDICTED: uncharacterized protein LOC10	0.868	0.643	0.811	1e-132

>gi|255543473|ref|XP_002512799.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223547810|gb|EEF49302.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis]

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/286 (84%), Positives = 267/286 (93%), Gaps = 1/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWVIGAFINL GSIAINFGTNLLKLGH ERE+HSTLD+DG +GK  LKPI+H+ +WR+
Sbjct: 1   MGEWVIGAFINLFGSIAINFGTNLLKLGHTERERHSTLDNDGASGKSHLKPIIHFQTWRI 60

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI+ F LGNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV +KMVTVKVLVATAFIVL
Sbjct: 61  GIIFFFLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLHKMVTVKVLVATAFIVL 120

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQLAEKYSN+TFL+YC+ILI +VA++HY+YR+GE L A+SGQ
Sbjct: 121 GNVFLVAFGNHQSPVYTPEQLAEKYSNMTFLLYCMILILVVALHHYLYRRGEILAAISGQ 180

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW+MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF S
Sbjct: 181 DLRPYWQMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFLS 240

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGLSLFDAI+IVPMFQI WT FSICTGFVYFQEYQV
Sbjct: 241 TAGFWMTRLNEGLSLFDAIVIVPMFQIVWTFFSICTGFVYFQEYQV 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128700|ref|XP_002320397.1| predicted protein [Populus trichocarpa] gi|222861170|gb|EEE98712.1| predicted protein [Populus trichocarpa]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/286 (84%), Positives = 265/286 (92%), Gaps = 1/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWVIGAFINL GSIAINFGTNLLKLGH ERE+HST D+ GT+GK  +KPI+++ +WRV
Sbjct: 1   MGEWVIGAFINLFGSIAINFGTNLLKLGHNERERHSTQDNVGTSGKVPVKPIIYFQTWRV 60

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GIL F LGNCLNFISFGYAAQSLLAALGS+QFVSNIAF+YFV NKMVTVKVLVATAFIVL
Sbjct: 61  GILFFFLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYFVLNKMVTVKVLVATAFIVL 120

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GNIFLV+FGNHQSPVYTPEQLAEKYSN+TFL YCL+LI +VA++HYIYR+GE +LA+SGQ
Sbjct: 121 GNIFLVAFGNHQSPVYTPEQLAEKYSNMTFLFYCLVLILLVALHHYIYRRGEIILAISGQ 180

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW+MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLAMS+ YQLHSWFTYS+LLLF S
Sbjct: 181 DLRPYWQMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLAMSSDYQLHSWFTYSILLLFLS 240

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGL+LFDAILIVPMFQI WT FSICTGFVYFQEYQV
Sbjct: 241 TAGFWMTRLNEGLALFDAILIVPMFQIVWTFFSICTGFVYFQEYQV 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498637|ref|XP_003518156.1| PREDICTED: uncharacterized protein LOC100778788 [Glycine max]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/286 (83%), Positives = 260/286 (90%), Gaps = 2/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEW++GAFINL GSIAINFGTNLLKLGH ERE+H  L SDG NGK +LKPI+++ SWR+
Sbjct: 1   MGEWIVGAFINLFGSIAINFGTNLLKLGHNERERH-LLGSDGVNGKMNLKPIIYFQSWRI 59

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI+ F LGNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV NKMVTVKVLVATAFIVL
Sbjct: 60  GIVFFFLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLNKMVTVKVLVATAFIVL 119

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQL EKY+NI+FL+Y L LI IVA++H IY++GE LL VSG 
Sbjct: 120 GNVFLVAFGNHQSPVYTPEQLTEKYTNISFLLYLLALISIVALHHSIYKRGELLLGVSGH 179

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLA+SNGYQLHSWFTYSMLLLF S
Sbjct: 180 DLRPYWSMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLALSNGYQLHSWFTYSMLLLFLS 239

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGLSLFDAILIVPMFQIAWT FSICTGF+YFQEYQV
Sbjct: 240 TAGFWMTRLNEGLSLFDAILIVPMFQIAWTLFSICTGFIYFQEYQV 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559514|ref|XP_003548044.1| PREDICTED: uncharacterized protein LOC100812264 [Glycine max]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/286 (83%), Positives = 258/286 (90%), Gaps = 2/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEW++GAFINL GSIAINFGTNLLKLGH ERE+H  L SDG NGK +LKPI+++ SWR+
Sbjct: 1   MGEWIVGAFINLFGSIAINFGTNLLKLGHNERERH-LLGSDGVNGKMNLKPIIYFQSWRI 59

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI+ F LGNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV NKMVTVKVLVATAFIVL
Sbjct: 60  GIVFFFLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLNKMVTVKVLVATAFIVL 119

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQL EKY+NI FL+Y L LI IVA++H IY++GE L AVSG 
Sbjct: 120 GNVFLVAFGNHQSPVYTPEQLTEKYTNIAFLLYLLALISIVALHHSIYKRGELLFAVSGH 179

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF S
Sbjct: 180 DLRPYWSMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFLS 239

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGLSLFDAILIVPMFQI WT FSICTGF+YFQEYQV
Sbjct: 240 TAGFWMTRLNEGLSLFDAILIVPMFQITWTFFSICTGFIYFQEYQV 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645549|gb|ACU23269.1| unknown [Glycine max]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/286 (83%), Positives = 258/286 (90%), Gaps = 2/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEW++GAFINL GSIAINFGTNLLKLGH ERE+H  L SDG NGK +LKPI+++ SWR+
Sbjct: 1   MGEWIVGAFINLFGSIAINFGTNLLKLGHNERERH-LLGSDGVNGKMNLKPIIYFQSWRI 59

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI+ F LGNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV NKMVTVKVLVATAFIVL
Sbjct: 60  GIVFFFLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLNKMVTVKVLVATAFIVL 119

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQL EKY+NI FL+Y L LI IVA++H IY++GE L AVSG 
Sbjct: 120 GNVFLVAFGNHQSPVYTPEQLTEKYTNIAFLLYLLALISIVALHHSIYKRGELLFAVSGH 179

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF S
Sbjct: 180 DLRPYWSMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFLS 239

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGLSLFDAILIVPMFQI WT FSICTGF+YFQEYQV
Sbjct: 240 TAGFWMTRLNEGLSLFDAILIVPMFQITWTFFSICTGFIYFQEYQV 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520012|ref|XP_004167028.1| PREDICTED: uncharacterized LOC101223129 [Cucumis sativus]

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/287 (81%), Positives = 263/287 (91%), Gaps = 1/287 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWVIGA INL GS+AINFGTNLLKLGH EREKHS L+++G+ GK  +KPI+++ +WRV
Sbjct: 1   MGEWVIGAVINLFGSLAINFGTNLLKLGHNEREKHSMLENNGSIGKTPMKPIIYFQTWRV 60

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI  F++GNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV +KMVTVKV+VATAFIVL
Sbjct: 61  GITFFIIGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLHKMVTVKVMVATAFIVL 120

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQL EKY NITFL+YC+ILI +VA++H IYR+GE LL+VSGQ
Sbjct: 121 GNVFLVAFGNHQSPVYTPEQLVEKYGNITFLLYCVILILVVALHHSIYRRGELLLSVSGQ 180

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYAIVSGA+GS SVLFAKSLS LLRLAMS+ YQLHSWFTYS+LLLF S
Sbjct: 181 DLRPYWHMLLPFSYAIVSGAIGSCSVLFAKSLSILLRLAMSSDYQLHSWFTYSLLLLFLS 240

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVL 286
           TAGFWMARLNEGLSLFDAILIVPMFQIAWT FSICTGF+YF+E+QVL
Sbjct: 241 TAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFIYFKEFQVL 287

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082240|emb|CBI21245.3| unnamed protein product [Vitis vinifera]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/286 (82%), Positives = 256/286 (89%), Gaps = 1/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWV+GA IN+ GSIAINFGTNLLKLGH ER +   LD++G NGK   KPI+++ +WRV
Sbjct: 1   MGEWVVGAIINVFGSIAINFGTNLLKLGHNERGRSLLLDNNGANGKLVPKPIIYFQTWRV 60

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           G+L F LGNCLNFISFGYAAQSLLAALGS+QFVSNIAF+YFV NKMV+VKVLVATAFIVL
Sbjct: 61  GLLFFSLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYFVLNKMVSVKVLVATAFIVL 120

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GNIFLV+FGNHQSPV+TPEQLAEK+SN TFLVYCLILI +VA+ HYIYR+GE   A+SGQ
Sbjct: 121 GNIFLVAFGNHQSPVFTPEQLAEKFSNATFLVYCLILILVVALNHYIYRRGEMQFAISGQ 180

Query: 181 D-NRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D   YW MLLPFSYA VSGAVGS SVLFAKSLSNLLRLAMS+GYQLHSWFTYSMLL F S
Sbjct: 181 DLEPYWHMLLPFSYATVSGAVGSCSVLFAKSLSNLLRLAMSSGYQLHSWFTYSMLLCFLS 240

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWMARLNEGLSLFDAILIVPMFQIAWT FSICTGFVYFQEYQV
Sbjct: 241 TAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQV 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515427|gb|AFK45775.1| unknown [Lotus japonicus]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/286 (82%), Positives = 257/286 (89%), Gaps = 2/286 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEW++GAFINL GSIAINFGTNLLKLGH ERE+H  L SDG NGK +LKPI+ + SWR+
Sbjct: 1   MGEWIVGAFINLFGSIAINFGTNLLKLGHNERERH-VLGSDGLNGKMTLKPIISFQSWRI 59

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GIL F LGNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV NKMVTVKVLVATAFIVL
Sbjct: 60  GILFFFLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLNKMVTVKVLVATAFIVL 119

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GNIFLV+FGNHQSPV+TPEQL EKY+N+ FL+Y L LI IVA++H  Y++GE LLAVSG 
Sbjct: 120 GNIFLVAFGNHQSPVFTPEQLTEKYTNVAFLLYLLALIVIVALHHSGYKRGELLLAVSGH 179

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYA+VSGAVGS SVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF S
Sbjct: 180 DLRPYWNMLLPFSYAVVSGAVGSCSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFLS 239

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGL+LFDAILIVPMFQIAWT FSICTGF+YFQEY V
Sbjct: 240 TAGFWMTRLNEGLALFDAILIVPMFQIAWTLFSICTGFIYFQEYLV 285

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818206|ref|XP_002876986.1| hypothetical protein ARALYDRAFT_484434 [Arabidopsis lyrata subsp. lyrata] gi|297322824|gb|EFH53245.1| hypothetical protein ARALYDRAFT_484434 [Arabidopsis lyrata subsp. lyrata]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/286 (80%), Positives = 260/286 (90%), Gaps = 4/286 (1%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWVIGAFIN+ GS+AINFGTNLLKLGH ERE+ +  D     GK  LKPI+H+ +WRV
Sbjct: 1   MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLALQDG---GGKMPLKPIIHFQTWRV 57

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GILVFLLGNCLNFISFGYAAQSLLAALGS+QFVSNIAF+Y V NKMVTVKVLVATAFIVL
Sbjct: 58  GILVFLLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYVVLNKMVTVKVLVATAFIVL 117

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPV+TPEQLAEKYSN+TFLVYC ILI IVA++H++YRKGE L+++ GQ
Sbjct: 118 GNVFLVAFGNHQSPVFTPEQLAEKYSNVTFLVYCGILILIVAVHHFLYRKGEVLISIPGQ 177

Query: 181 D-NRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           + + YW+MLLPFSYA+VSGA+GS SVLFAKSLSNLLRLAMS+ YQLHSWFTYSMLLLF S
Sbjct: 178 EISSYWKMLLPFSYAVVSGAIGSCSVLFAKSLSNLLRLAMSSSYQLHSWFTYSMLLLFLS 237

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
           TAGFWM RLNEGLSL+DAILIVPMFQIAWT FSICTGF+YFQE+QV
Sbjct: 238 TAGFWMTRLNEGLSLYDAILIVPMFQIAWTFFSICTGFIYFQEFQV 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455764|ref|XP_004145621.1| PREDICTED: uncharacterized protein LOC101223129 [Cucumis sativus]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/287 (81%), Positives = 264/287 (91%), Gaps = 2/287 (0%)

Query: 1   MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
           MGEWVIGA INL GS+AINFGTNLLKLGH EREKHS L+++G+ GK  +KPI+++ +WRV
Sbjct: 1   MGEWVIGAVINLFGSLAINFGTNLLKLGHNEREKHSMLENNGSIGKTPMKPIIYFQTWRV 60

Query: 61  GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
           GI +F++GNCLNFISFGYAAQSLLAALGSVQFVSNIAF+YFV +KMVTVKV+VATAFIVL
Sbjct: 61  GI-IFIIGNCLNFISFGYAAQSLLAALGSVQFVSNIAFAYFVLHKMVTVKVMVATAFIVL 119

Query: 121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
           GN+FLV+FGNHQSPVYTPEQL EKY NITFL+YC+ILI +VA++H IYR+GE LL+VSGQ
Sbjct: 120 GNVFLVAFGNHQSPVYTPEQLVEKYGNITFLLYCVILILVVALHHSIYRRGELLLSVSGQ 179

Query: 181 DNR-YWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
           D R YW MLLPFSYAIVSGA+GS SVLFAKSLS LLRLAMS+ YQLHSWFTYS+LLLF S
Sbjct: 180 DLRPYWHMLLPFSYAIVSGAIGSCSVLFAKSLSILLRLAMSSDYQLHSWFTYSLLLLFLS 239

Query: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVL 286
           TAGFWMARLNEGLSLFDAILIVPMFQIAWT FSICTGF+YF+E+QVL
Sbjct: 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFIYFKEFQVL 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
TAIR|locus:2090822	441	AT3G26670 "AT3G26670" [Arabido	0.859	0.639	0.807	5.1e-122
UNIPROTKB|F1NBN3	339	NPAL2 "Uncharacterized protein	0.789	0.764	0.272	1.7e-17
RGD|1564315	383	Nipal2 "NIPA-like domain conta	0.817	0.699	0.230	5.2e-15
ZFIN|ZDB-GENE-040718-379	387	nipal3 "NIPA-like domain conta	0.768	0.651	0.253	9.2e-15
MGI|MGI:1924488	383	Nipal2 "NIPA-like domain conta	0.817	0.699	0.234	3.8e-14
WB|WBGene00021820	397	nipa-1 [Caenorhabditis elegans	0.658	0.544	0.235	7.6e-14
UNIPROTKB|Q9H841	368	NIPAL2 "NIPA-like protein 2" [	0.817	0.728	0.234	1e-13
UNIPROTKB|A2RTY8	383	NPAL2 "NPAL2 protein" [Homo sa	0.817	0.699	0.234	1.2e-13
TAIR|locus:2076186	335	AT3G23870 "AT3G23870" [Arabido	0.649	0.635	0.199	4.9e-13
UNIPROTKB|E1BHG8	383	NIPAL2 "Uncharacterized protei	0.817	0.699	0.214	6.2e-13

TAIR|locus:2090822 AT3G26670 "AT3G26670" [Arabidopsis thaliana (taxid:3702)]

 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 231/286 (80%), Positives = 258/286 (90%)

Query:     1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRV 60
             MGEWVIGAFIN+ GS+AINFGTNLLKLGH ERE+ +    DG  GK  LKPI+H  +WRV
Sbjct:     1 MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLAL--QDG-GGKMPLKPIIHNQTWRV 57

Query:    61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVL 120
             GILVFLLGNCLNFISFGYAAQSLLAALGS+QFVSNIAF+Y V NKMVTVKVLVATAFIVL
Sbjct:    58 GILVFLLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYVVLNKMVTVKVLVATAFIVL 117

Query:   121 GNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQ 180
             GN+FLV+FGNHQSPV+TPEQLAEKYSN+TFLVYC ILI IVA++H++YRKGE L++  GQ
Sbjct:   118 GNVFLVAFGNHQSPVFTPEQLAEKYSNVTFLVYCGILILIVAVHHFLYRKGEVLISTPGQ 177

Query:   181 D-NRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
             + + YW+MLLPFSYA+VSGA+GS SVLFAKSLSNLLRLAMS+ YQLHSWFTYSMLLLF S
Sbjct:   178 EISSYWKMLLPFSYAVVSGAIGSCSVLFAKSLSNLLRLAMSSSYQLHSWFTYSMLLLFLS 237

Query:   240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285
             TAGFWM RLNEGLSL+DAILIVPMFQIAWT FSICTG +YFQE+QV
Sbjct:   238 TAGFWMTRLNEGLSLYDAILIVPMFQIAWTFFSICTGCIYFQEFQV 283

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NBN3 NPAL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 77/283 (27%), Positives = 136/283 (48%)

Query:    49 LKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVT 108
             L+P      W  G ++  +G   NF ++G+A  +L+A LG V  + +   S     K + 
Sbjct:    37 LQPFYRSKLWWCGAVLLGIGELGNFTAYGFAPIALVAPLGCVSIIGSAFISVIFLKKTMR 96

Query:   109 VKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIY 168
                ++  A  V+G   LV+F  + S   T  Q+     +  FLVY ++ I I  I  Y Y
Sbjct:    97 AADILGGALAVVGTYLLVTFAPNVSQQLTARQVQNDLVSWPFLVYVILEIIIFCILLYFY 156

Query:   169 RKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSW 228
             ++     AV     ++  +LL     ++   + S +V+  K++++++ L+     QL   
Sbjct:   157 KRK----AV-----KHIVVLL-----MMVALLASLTVIAVKAVASMIILSAKGKMQLTYP 202

Query:   229 FTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLC- 287
               Y ML+L  ++  F +  LN+ L L++A  +VP+  +  T+ +I +G +++QE+Q    
Sbjct:   203 VFYIMLILMATSCVFQVKFLNQALHLYEARAVVPINFVFCTTSAIISGVIFYQEFQSAAF 262

Query:   288 LSPFL-KFGATLS--SRF------NNFRSNVIHVPVFCIGSRK 321
             LS F+  FG  LS  S F      N  R  V ++   CI  +K
Sbjct:   263 LSVFMFLFGCLLSFLSVFVIAVNKNEERLQVPYIDCGCIPGQK 305

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

RGD|1564315 Nipal2 "NIPA-like domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 210 (79.0 bits), Expect = 5.2e-15, P = 5.2e-15
 Identities = 69/299 (23%), Positives = 135/299 (45%)

Query:     5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
             + G  + ++G++ I+   N+ K  H+   +           K   KP      W  G+L+
Sbjct:    48 LFGVLLAILGNLVISISLNIQKYSHLHLAQ-----------KEHPKPYFKSVLWLSGVLL 96

Query:    65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
               +G   NF ++G A  +L+A LG V    +   S     + +    L+       G   
Sbjct:    97 MAIGETGNFAAYGVAPITLIAPLGCVSVTGSAVISVIFLKENLRASDLLGMTLAFAGTYL 156

Query:   125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSGQDN 182
             LV+F  + +   +   +   +    FLVY +  IL+F + +Y +  RKG+  + +     
Sbjct:   157 LVNFAPNITQAISARTIQYYFVGWQFLVYMILEILVFCILLYFH-KRKGKKHIVI----- 210

Query:   183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                  LL     +V+  + S +V+  K++S ++ L+++   QL     Y ML++  ++  
Sbjct:   211 -----LL----TLVA-LLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIMLVIMIASCV 260

Query:   243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ-VLCLSPFLK-FGATLS 299
             F +  LN+   L+    +VP+  + +T+ +I  G +++QE+     L+ F+  FG  LS
Sbjct:   261 FQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIYLFGCFLS 319

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-040718-379 nipal3 "NIPA-like domain containing 3" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
 Identities = 72/284 (25%), Positives = 134/284 (47%)

Query:    11 NLVGSIAINFGTNLLKLG-HIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGN 69
             NL+G++   FG  L+ +   I+++ H TL      G    +   +  +W +G+++ +LG 
Sbjct:    20 NLIGTLLAIFGNLLVSISVSIQKQSHVTLA-----GNKDPRQYYYTKTWLLGLVLMVLGE 74

Query:    70 CLNFISFGYAAQSLLAALGSVQFVSNIAFSY-FVFNKMVTVKVL---VAT----AFIVLG 121
                F+S+ +A  SL+A L +V  +S+    + F+  K    + L   + T    A    G
Sbjct:    75 GALFVSYAFAPLSLIAPLNAVSVISSSILGFLFLREKWKAQEFLKRYILTFLGCAMTAGG 134

Query:   122 NIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSG 179
                 V+FG +       E + +   +  FL+Y L  I+ F + +Y+Y  R    L+ +  
Sbjct:   135 TYLFVTFGPNSHEKLNAENIVKHVISWPFLLYLLLGIIAFCLVLYYYKQRNANYLVLI-- 192

Query:   180 QDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFS 239
                    +LL    A++    GS +V+  K++S ++ L++    QL     Y M +   +
Sbjct:   193 -------LLL---VALL----GSVTVITVKAVSGMIVLSIVGPLQLSYPIFYVMFVCMVA 238

Query:   240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
             T  F  + L +   L+D+ LI  +  I  T+F+I  G V++QE+
Sbjct:   239 TIVFQASFLAQASHLYDSSLIACVNYIFCTTFAIGGGAVFYQEF 282

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

MGI|MGI:1924488 Nipal2 "NIPA-like domain containing 2" [Mus musculus (taxid:10090)]

 Score = 203 (76.5 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 70/299 (23%), Positives = 134/299 (44%)

Query:     5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
             + G  + ++G++ I+   N+ K  H+   +           K   KP      W  G+L+
Sbjct:    48 LFGVLLAILGNLVISISLNIQKYSHLHLAQ-----------KEHPKPYFKSVLWLSGVLL 96

Query:    65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
               LG   NF ++G A  +L+A LG +    +   S     + +    L+       G   
Sbjct:    97 TALGETGNFAAYGVAPITLIAPLGCMSVTGSAIISVLFLKENLRASDLLGMTLAFAGTYL 156

Query:   125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSGQDN 182
             LV+F  + +   +   +   +    FLVY +  IL+F + +Y +  RKG   + V     
Sbjct:   157 LVNFAPNITQAISARTVQYYFVGWQFLVYVILEILVFCILLYFH-KRKGMKHIVV----- 210

Query:   183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                  LL     +V+  + S +V+  K++S ++ L+++   QL     Y ML++  ++  
Sbjct:   211 -----LL----TLVA-LLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIMLVIMIASCV 260

Query:   243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ-VLCLSPFLK-FGATLS 299
             F +  LN+   L+    +VP+  + +T+ +I  G +++QE+     L+ F+  FG  LS
Sbjct:   261 FQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIYLFGCFLS 319

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=IEA

WB|WBGene00021820 nipa-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 201 (75.8 bits), Expect = 7.6e-14, P = 7.6e-14
 Identities = 54/229 (23%), Positives = 105/229 (45%)

Query:    58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAF 117
             W +G++   +G   NF ++ +A  SL+  LG++  +     S  + N+ + +   +  A 
Sbjct:   106 WWMGVITMGIGEACNFAAYAFAPASLVTPLGALSVIVTAILSSRMLNERLNLLGSIGCAL 165

Query:   118 IVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAV 177
              +LG+  +V     +  V +   LA K  +  FL+Y +ILI +   +  +Y     +   
Sbjct:   166 CLLGSTVIVIHSPKEEEVGSMADLALKMKDAGFLIY-VILIILATGFIVVY-----VAPR 219

Query:   178 SGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF 237
              G  N    +L+   Y  V   +GS SVL  K L   ++  ++   Q  +W TY  L   
Sbjct:   220 YGHSN----ILV---YISVCSLIGSLSVLSVKGLGLAIKETLAGNQQFTNWLTYFWLASV 272

Query:   238 FSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVL 286
                    +  LN+ L +F+  ++ P++ + +T+F I    + ++E+  L
Sbjct:   273 AMCVSVQLIYLNKALDIFNTSMVTPIYYVFFTTFVILASSILYKEWSCL 321

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0015693 "magnesium ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0008344 "adult locomotory behavior" evidence=IMP

UNIPROTKB|Q9H841 NIPAL2 "NIPA-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 70/299 (23%), Positives = 134/299 (44%)

Query:     5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
             + G  + ++G++ I+   N+ K  H++  +           +H  +P      W  G+L+
Sbjct:    48 LFGVLLAILGNLVISISLNIQKYSHLQLAQQ----------EHP-RPYFKSVLWWGGVLL 96

Query:    65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
               +G   NF ++G+A  +L+A LG V    +   S       +    L+ T     G   
Sbjct:    97 MAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYL 156

Query:   125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSGQDN 182
             LV+F  + +   +   +        FL+Y +  ILIF + +Y Y  RKG   + +     
Sbjct:   157 LVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVI----- 210

Query:   183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                  LL    AI++    S +V+  K++S ++  ++ +  QL     Y M ++  ++  
Sbjct:   211 -----LLTL-VAILA----SLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCV 260

Query:   243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ-VLCLSPFLK-FGATLS 299
             F +  LN+   L++   +VP+  I +T  +I  G +++QE+     L+ F+  FG  LS
Sbjct:   261 FQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLS 319

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A2RTY8 NPAL2 "NPAL2 protein" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 70/299 (23%), Positives = 134/299 (44%)

Query:     5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
             + G  + ++G++ I+   N+ K  H++  +           +H  +P      W  G+L+
Sbjct:    48 LFGVLLAILGNLVISISLNIQKYSHLQLAQQ----------EHP-RPYFKSVLWWGGVLL 96

Query:    65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
               +G   NF ++G+A  +L+A LG V    +   S       +    L+ T     G   
Sbjct:    97 MAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYL 156

Query:   125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSGQDN 182
             LV+F  + +   +   +        FL+Y +  ILIF + +Y Y  RKG   + +     
Sbjct:   157 LVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVI----- 210

Query:   183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                  LL    AI++    S +V+  K++S ++  ++ +  QL     Y M ++  ++  
Sbjct:   211 -----LLTL-VAILA----SLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCV 260

Query:   243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ-VLCLSPFLK-FGATLS 299
             F +  LN+   L++   +VP+  I +T  +I  G +++QE+     L+ F+  FG  LS
Sbjct:   261 FQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLS 319

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2076186 AT3G23870 "AT3G23870" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 45/226 (19%), Positives = 110/226 (48%)

Query:    58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAF 117
             W  G++  ++G   NF ++ +A   L+  LG++  + +   ++F+  + + +  ++    
Sbjct:    56 WWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCIL 115

Query:   118 IVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAV 177
              V+G+  +V    H+  + + +Q+ +      FLVY  +++ +VAI  + Y         
Sbjct:   116 CVVGSTTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYY--------- 166

Query:   178 SGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLF 237
                + RY +  +   Y  +   +GS +V+  K+++  ++L  S   Q   + T+  +L+ 
Sbjct:   167 ---EPRYGKTHM-IVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFILVV 222

Query:   238 FSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283
              +     +  LN+ L  F+  +I P++ + +T+F+I    + F+++
Sbjct:   223 ATCCILQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDW 268

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|E1BHG8 NIPAL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 6.2e-13, P = 6.2e-13
 Identities = 64/299 (21%), Positives = 136/299 (45%)

Query:     5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
             + G  + ++G++ I+   N+ K  H+   +           +H  +P      W  G+++
Sbjct:    48 LFGVLLAILGNLVISISLNIQKYSHLRLAQQ----------EHP-RPYFRSVLWWGGVIL 96

Query:    65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
               LG   NF+++G A  +L+A LG +    +   S     + +    L+     + G   
Sbjct:    97 MALGEMGNFVAYGVAPITLIAPLGCMSVTGSAITSVMFLRENLRASDLIGMTLALAGTYL 156

Query:   125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCL--ILIFIVAIYHYIYRKGENLLAVSGQDN 182
             LV+F  + +   +   +   +    F++Y +  IL+F + +Y +  RKG   + +     
Sbjct:   157 LVNFAPNITQAISARTVQYYFVGWQFMIYMILEILVFCILLYFH-KRKGMKHIVI----- 210

Query:   183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                  LL     +V+  + S +V+  K++S ++  ++++  QL     Y M ++  ++  
Sbjct:   211 -----LL----TLVA-LLASVTVISVKAVSGMITFSVTDKMQLTYPIFYIMCIIMIASCV 260

Query:   243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ-VLCLSPFLK-FGATLS 299
             F +  LN+   L++   +VP+  I +T  +I  G +++QE+     L+ F+  FG  LS
Sbjct:   261 FQVKLLNQATKLYNTATVVPVNHIFFTISAIIAGIIFYQEFLGAAFLTIFIYLFGCFLS 319

GO:0016020 "membrane" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XIV0798 hypothetical protein (444 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	328
pfam05653	300	pfam05653, Mg_trans_NIPA, Magnesium transporter NI	3e-16

>gnl|CDD|114381 pfam05653, Mg_trans_NIPA, Magnesium transporter NIPA

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 54/282 (19%), Positives = 120/282 (42%), Gaps = 23/282 (8%)

Query: 5   VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILV 64
            IG  + +  SI I     + K G +   +       G  G   LK  +    W  G+L 
Sbjct: 6   YIGLILAVSSSIFIGSSFIIKKKGLLRLARGGM--RAGEGGYGYLKEWL----WWAGLLT 59

Query: 65  FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124
            ++G   NF ++ +A  +L+  LG++  + +   S F  N+ + +   +     ++G+  
Sbjct: 60  MIVGEAANFAAYAFAPATLVTPLGALSVIISAVLSSFFLNEKLNLFGKLGCVLCIVGSTV 119

Query: 125 LVSFGNHQSPVYTPEQLAEKYSNITFLVY--CLILIFIVAIYHYIYRKGENLLAVSGQDN 182
           +V     +  + +  ++    ++  FLVY   ++ + ++ I+    R G+  + V     
Sbjct: 120 IVIHAPKEQEIESVREVWNLATDPGFLVYVILVVGVVLILIFFVEPRHGQTNILV----- 174

Query: 183 RYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAG 242
                     Y  +   +GS +V+  K+L   ++L  S   QL     +  L++  +   
Sbjct: 175 ----------YITICSLIGSLTVMSVKALGIAIKLTFSGKNQLGYPQFWIFLVVVVTCVV 224

Query: 243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQ 284
             +  LN+ L +F+  ++ P++ + +T+  I    + F+E+ 
Sbjct: 225 TQINYLNKALDIFNTSIVTPVYYVFFTTSVIAASAILFKEWL 266

NIPA (nonimprinted in Prader-Willi/Angelman syndrome) is a family of integral membrane proteins which function as magnesium transporters. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	328
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	100.0
KOG2922	335	consensus Uncharacterized conserved protein [Funct	100.0
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.08
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.83
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.71
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.54
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.5
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.43
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.34
COG2510	140	Predicted membrane protein [Function unknown]	98.33
PRK15430	296	putative chloramphenical resistance permease RarD;	98.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.22
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.19
PRK11689	295	aromatic amino acid exporter; Provisional	98.06
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.04
PRK11272	292	putative DMT superfamily transporter inner membran	98.03
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.95
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.9
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.8
PLN00411	358	nodulin MtN21 family protein; Provisional	97.78
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.75
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.73
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.69
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.57
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.55
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.48
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.43
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.35
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.28
PLN00411	358	nodulin MtN21 family protein; Provisional	97.21
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.21
PRK11431	105	multidrug efflux system protein; Provisional	97.03
PRK11272	292	putative DMT superfamily transporter inner membran	96.99
COG2076	106	EmrE Membrane transporters of cations and cationic	96.96
PRK11689	295	aromatic amino acid exporter; Provisional	96.94
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.73
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.67
COG0697	292	RhaT Permeases of the drug/metabolite transporter	95.87
PRK13499	345	rhamnose-proton symporter; Provisional	95.84
COG2510	140	Predicted membrane protein [Function unknown]	95.78
PRK15430	296	putative chloramphenical resistance permease RarD;	95.53
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.45
COG2962	293	RarD Predicted permeases [General function predict	94.75
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	94.61
KOG3912	372	consensus Predicted integral membrane protein [Gen	94.54
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.46
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.46
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	94.03
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	93.99
KOG2765	416	consensus Predicted membrane protein [Function unk	93.31
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	92.18
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	90.04
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	89.96
PRK10650	109	multidrug efflux system protein MdtI; Provisional	89.95
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	89.94
KOG4831	125	consensus Unnamed protein [Function unknown]	89.38
PRK11431	105	multidrug efflux system protein; Provisional	89.2
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	88.0
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	86.55
PRK09541	110	emrE multidrug efflux protein; Reviewed	86.32
COG1742	109	Uncharacterized conserved protein [Function unknow	86.2
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	84.84
PRK02237	109	hypothetical protein; Provisional	83.84
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	83.69
COG2076	106	EmrE Membrane transporters of cations and cationic	83.11
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	82.18
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	80.41
PF13536	113	EmrE: Multidrug resistance efflux transporter	80.02

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=100.00  E-value=7.6e-60  Score=448.93  Aligned_cols=287  Identities=30%  Similarity=0.529  Sum_probs=255.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhchh
Q 020283            2 GEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQ   81 (328)
Q Consensus         2 ~~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~   81 (328)
                      ++|++|+.+|++||++++.|.++|||+|.|+++.+.+++      ...++++|||+||+|+.++++|++++++||+++|+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~------~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~   76 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG------SGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPA   76 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc------chhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhH
Confidence            468999999999999999999999999999876433221      12457899999999999999999999999999999


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCChHHHHHHhcchhhHHHHHHHHHHH
Q 020283           82 SLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIV  161 (328)
Q Consensus        82 slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~  161 (328)
                      ++|+|+|++++++|++++++++|||++++|++|+++++.|+++++.++|++++++|++|+.+++++|.|++|+.+..++.
T Consensus        77 slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~  156 (300)
T PF05653_consen   77 SLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLI  156 (300)
T ss_pred             HHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988776655


Q ss_pred             HHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHH
Q 020283          162 AIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTA  241 (328)
Q Consensus       162 ~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~~  241 (328)
                      +.+.+..+.+      .|+++       .+.|..+||++|++|++++|++++.++++++|+||+.+|.+|.++++++.++
T Consensus       157 ~~L~~~~~~r------~g~~~-------i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~  223 (300)
T PF05653_consen  157 LILIFFIKPR------YGRRN-------ILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTA  223 (300)
T ss_pred             HHHHHhhcch------hcccc-------eEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHH
Confidence            4433322211      12222       6789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhh---------hhhhhccccCCCC
Q 020283          242 GFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKF---------GATLSSRFNNFRS  307 (328)
Q Consensus       242 i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~f---------g~~l~~~~~~~~~  307 (328)
                      +.|++||||||++||++.++|++|++||++++++|+++|||+++.++++++.|         |+.+.+..+|.++
T Consensus       224 ~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  224 VLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             HHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhc
Confidence            99999999999999999999999999999999999999999999999998854         6666666666543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=7.1e-60  Score=441.30  Aligned_cols=288  Identities=23%  Similarity=0.390  Sum_probs=260.2

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhch
Q 020283            1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAA   80 (328)
Q Consensus         1 m~~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap   80 (328)
                      +++|++|+.+|+.||++++.+.+++||+|+|.+..+.++.++  +    .++++.|+||+|++.|++|+++||.||+|||
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~g--g----~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAP   89 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEG--G----YGYLKEPLWWAGMLTMIVGEIANFAAYAFAP   89 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCC--C----cchhhhHHHHHHHHHHHHHhHhhHHHHhhch
Confidence            468999999999999999999999999999988755554432  2    3467889999999999999999999999999


Q ss_pred             hHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCChHHHHHHhcchhhHHHHHHHHHH
Q 020283           81 QSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFI  160 (328)
Q Consensus        81 ~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i  160 (328)
                      +++|+|||++++++|+++|++++||+++..+.+||+++++|.+++|.++|++++..|++|+.+++++|+|++|+.+.+.+
T Consensus        90 asLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~  169 (335)
T KOG2922|consen   90 ASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILI  169 (335)
T ss_pred             HhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 020283          161 VAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFST  240 (328)
Q Consensus       161 ~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~  240 (328)
                      .+++++.++.+      +|+.|       .+.|..+|+++|++||++.|+++.+++.+++|++|+.+|.+|.++.+++.+
T Consensus       170 ~~il~~~~~p~------~g~tn-------ilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~  236 (335)
T KOG2922|consen  170 VLILIFFYAPR------YGQTN-------ILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATC  236 (335)
T ss_pred             HHHHheeeccc------ccccc-------eeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHH
Confidence            77655443322      23334       899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhh---------hhhhhccccCCCC
Q 020283          241 AGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKF---------GATLSSRFNNFRS  307 (328)
Q Consensus       241 ~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~f---------g~~l~~~~~~~~~  307 (328)
                      +.+|++||||||+.||++++.|+||++||..++++|.|+|+||++.+..+...+         |+.++.++++-++
T Consensus       237 ~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~  312 (335)
T KOG2922|consen  237 VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEI  312 (335)
T ss_pred             HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence            999999999999999999999999999999999999999999999999999854         5555555555443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.08  E-value=4.1e-10  Score=95.02  Aligned_cols=117  Identities=17%  Similarity=0.117  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccc--hhHHHHHHHHHHHHHHHHHHhhchhHH
Q 020283            6 IGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYH--SWRVGILVFLLGNCLNFISFGYAAQSL   83 (328)
Q Consensus         6 iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~W~~G~~l~~~g~~~~~~Al~~ap~sl   83 (328)
                      +|.++.+.+.++.+.||.+.|++..+.+..+...    ...... ....+|  .-+.|+.++++++.+|..++...|++.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~----~~~~~~-~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~   76 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW----DFIAAL-LAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSR   76 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh----HHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence            3677888999999999999999988754221100    000011 134567  789999999999999999999999999


Q ss_pred             HhhhhhhhHHHHHHHHHH--HhccccccchhhhhhhhhhcceeEEe
Q 020283           84 LAALGSVQFVSNIAFSYF--VFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        84 v~Pl~~~~lv~~~~~a~~--~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      ..|+-+...+...+.+..  ++||+++.++++|+.++++|+.++..
T Consensus        77 Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         77 AYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            999999998888888875  79999999999999999999887654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.83  E-value=2.9e-07  Score=86.65  Aligned_cols=250  Identities=10%  Similarity=0.005  Sum_probs=134.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhc-ccCCCCCC----------CCCccccccccccchhH----HHHHHHHHHHHHH
Q 020283            8 AFINLVGSIAINFGTNLLKLGHIEREK-HSTLDSDG----------TNGKHSLKPIVHYHSWR----VGILVFLLGNCLN   72 (328)
Q Consensus         8 v~Lal~ssi~~a~G~~lqk~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~p~W~----~G~~l~~~g~~~~   72 (328)
                      ..+.+.++++.|..+.+.|+...++.. .....--.          .......++ . ++.||    .+.........+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSR-L-PATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCC-c-chhhHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999965443211 00000000          000000111 1 12222    2333345666777


Q ss_pred             HHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCChHHHHHHhcchhhHH
Q 020283           73 FISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLV  152 (328)
Q Consensus        73 ~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~~el~~~~~~~~fl~  152 (328)
                      ..++...|.+..+|+...+-++..+++.+++|||+++++|.|..++..|+.++..  ++. +..+          +.-..
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~~-~~~~----------~~g~~  147 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SRF-AQHR----------RKAYA  147 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--ccc-cccc----------hhHHH
Confidence            8899999999999999999999999999999999999999999999999886643  221 1111          10111


Q ss_pred             HHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhh-HHHHHHHHHHHHHHHhhcCc-cchhHHH
Q 020283          153 YCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSF-SVLFAKSLSNLLRLAMSNGY-QLHSWFT  230 (328)
Q Consensus       153 y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~-svl~aK~~~~~l~~~~~g~~-~~~~~~~  230 (328)
                      +.....+..+......|+...     +. ++..   ....+...+-++++. ..+..     ...   ++.. +...+..
T Consensus       148 ~~l~aal~~a~~~i~~k~~~~-----~~-~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~  210 (281)
T TIGR03340       148 WALAAALGTAIYSLSDKAAAL-----GV-PAFY---SALGYLGIGFLAMGWPFLLLY-----LKR---HGRSMFPYARQI  210 (281)
T ss_pred             HHHHHHHHHHHhhhhcccccc-----ch-hccc---ccHHHHHHHHHHHHHHHHHHH-----HHH---hccchhhhHHHH
Confidence            211111111111112222110     00 0000   011111111111111 11000     000   1111 1122222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          231 YSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       231 y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                      +.++............+.++++++.|++.+.+..|. .++.+++.|.++++|.  .+..+++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~--~~~~~~i  269 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNER--WYLTRLM  269 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCC--ccHHHHH
Confidence            333333434444455677999999999999888776 5899999999999995  4555555

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.71  E-value=8.3e-08  Score=78.87  Aligned_cols=102  Identities=17%  Similarity=0.125  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHH--HHHHHHHHHHHHHHhhchhHHHhhh
Q 020283           10 INLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI--LVFLLGNCLNFISFGYAAQSLLAAL   87 (328)
Q Consensus        10 Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~--~l~~~g~~~~~~Al~~ap~slv~Pl   87 (328)
                      .-+++.++-..|+...|++.++.+.          +...     .++..+.+.  ..+.++..++..++...|++...|+
T Consensus         5 ~l~~ai~~ev~g~~~lK~s~~~~~~----------~~~~-----~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~   69 (111)
T PRK15051          5 TLVFASLLSVAGQLCQKQATRPVAI----------GKRR-----KHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPM   69 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCc----------chhh-----hHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH
Confidence            3456667778899999998543210          1000     012345555  6688999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           88 GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        88 ~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      .+++.+++.+.+.+++|||++.++++|..+++.|+.++.
T Consensus        70 ~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         70 LSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999987653

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.54  E-value=8.6e-06  Score=74.98  Aligned_cols=201  Identities=16%  Similarity=0.072  Sum_probs=117.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCC
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT  137 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t  137 (328)
                      -..|.....+.+.+.+.|+...|.+...++.++.=+++.+++..++|||++++++.|..+.++|+.++...+   +.+. 
T Consensus        50 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~~~~-  125 (260)
T TIGR00950        50 LLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG---NLSI-  125 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC---cccc-
Confidence            356666677888888999999999999999999999999999999999999999999999999988765322   1111 


Q ss_pred             hHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q 020283          138 PEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRL  217 (328)
Q Consensus       138 ~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~  217 (328)
                               +..-..+..+..+.........|+....      .++..    ...+. ..-.+++... ..       ..
T Consensus       126 ---------~~~G~~~~l~a~~~~a~~~~~~k~~~~~------~~~~~----~~~~~-~~~~~~~~~l-~~-------~~  177 (260)
T TIGR00950       126 ---------NPAGLLLGLGSGISFALGTVLYKRLVKK------EGPEL----LQFTG-WVLLLGALLL-LP-------FA  177 (260)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHhHHhhc------CCchH----HHHHH-HHHHHHHHHH-HH-------HH
Confidence                     1001112222222222211122332100      00000    01111 0011111111 11       01


Q ss_pred             HhhcCccchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhh
Q 020283          218 AMSNGYQLHSWFTYS-MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLK  293 (328)
Q Consensus       218 ~~~g~~~~~~~~~y~-ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~  293 (328)
                      ...++....++..|. ++...+.+........++|+++.++..+..+.+ ..|+.+.+.+.++++|  +.++.++..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E--~~~~~~~~G  251 (260)
T TIGR00950       178 WFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGE--TLSLPQLIG  251 (260)
T ss_pred             HhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHHH
Confidence            112222212334442 333333333444455699999999888777755 7889999999999999  455555553

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.50  E-value=9.3e-06  Score=77.20  Aligned_cols=192  Identities=15%  Similarity=0.177  Sum_probs=105.4

Q ss_pred             HHHHHHHhh-chhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCChHHHHHHhcch
Q 020283           70 CLNFISFGY-AAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNI  148 (328)
Q Consensus        70 ~~~~~Al~~-ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~~el~~~~~~~  148 (328)
                      .+.+.++.. .|.+..+-+.++.-++..+++++++|||+++++++|.++.++|+.++.. .+.++...  + .      .
T Consensus        74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~-~~~~~~~~--~-~------~  143 (299)
T PRK11453         74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE-DSLNGQHV--A-M------L  143 (299)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc-ccCCCcch--h-H------H
Confidence            344566666 4777777777777788999999999999999999999999999887653 11111111  0 0      0


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhcCc-----
Q 020283          149 TFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGY-----  223 (328)
Q Consensus       149 ~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~~~g~~-----  223 (328)
                      + ..+.....+..+......|+..+       +++...   .+.+......+++.-...   .+ ...   ++++     
T Consensus       144 G-~~l~l~aal~~a~~~v~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~---~~-~~~---~~~~~~~~~  205 (299)
T PRK11453        144 G-FMLTLAAAFSWACGNIFNKKIMS-------HSTRPA---VMSLVVWSALIPIIPFFV---AS-LIL---DGSATMIHS  205 (299)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHHhc-------ccCccc---hhHHHHHHHHHHHHHHHH---HH-HHh---cCchhhhhh
Confidence            1 11111111111121112232110       000010   111112222222111100   00 010   1111     


Q ss_pred             -cchhHHHH-HHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          224 -QLHSWFTY-SMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       224 -~~~~~~~y-~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                       ...++..| .++...+.++..+....++++++.++..+.++ ....|+.+++.|.++++|.  .+..+++
T Consensus       206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~--~~~~~~i  273 (299)
T PRK11453        206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDER--LTGLQFL  273 (299)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCC--ccHHHHH
Confidence             11123333 34444566667777888999999998877775 5688999999999999994  5566666

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.43  E-value=2.1e-07  Score=76.61  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=82.0

Q ss_pred             HHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhchhHHHhhhh-hhhHHHHHH
Q 020283           19 NFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALG-SVQFVSNIA   97 (328)
Q Consensus        19 a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~-~~~lv~~~~   97 (328)
                      +..+-+.||+....++...+.    +.....+..++||+.++++.+...|++..+..++-+|+|+..|+. +++++++++
T Consensus         9 G~Tnpfik~g~~~~~~~~~~~----~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l   84 (113)
T PF10639_consen    9 GCTNPFIKRGSSGLEKVKASL----QLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTAL   84 (113)
T ss_pred             cCchHHHHHHHhhcCCccchH----HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHH
Confidence            455667788876543221000    012234457899999999999999999999999999999999995 999999999


Q ss_pred             HHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           98 FSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        98 ~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      .++++.+|..+++.++|+.+++.|+.+.+
T Consensus        85 ~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv  113 (113)
T PF10639_consen   85 TGWLLGEEVISRRTWLGMALILAGVALCV  113 (113)
T ss_pred             HHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence            99777777778889999999999988753

Many members are annotated as potential transmembrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.34  E-value=7.5e-05  Score=71.04  Aligned_cols=205  Identities=15%  Similarity=0.064  Sum_probs=121.4

Q ss_pred             chhHHHHHH---HHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccch----hhhhhhhhhcceeEEe
Q 020283           56 HSWRVGILV---FLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKV----LVATAFIVLGNIFLVS  127 (328)
Q Consensus        56 p~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~----~~g~~li~~G~~~iv~  127 (328)
                      ..|..|+..   ...|++..+.|.....+++-.|+.. ++++++.+.+.+++||+.++++    +.|.++++.|+.++..
T Consensus        57 ~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~  136 (290)
T TIGR00776        57 SIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR  136 (290)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence            345657777   8899999999999999999999999 8999999999999999999999    9999999999887755


Q ss_pred             ecCCCCCCCChHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHH
Q 020283          128 FGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLF  207 (328)
Q Consensus       128 ~g~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~  207 (328)
                      ..++   ..+.++..   ..+.=+.+..+..+.-+......|+-+    .+    |.     ...+....|++.+-.+++
T Consensus       137 ~~~~---~~~~~~~~---~~~~Gi~~~l~sg~~y~~~~~~~~~~~----~~----~~-----~~~~~~~~g~~~~~~~~~  197 (290)
T TIGR00776       137 SKDK---SAGIKSEF---NFKKGILLLLMSTIGYLVYVVVAKAFG----VD----GL-----SVLLPQAIGMVIGGIIFN  197 (290)
T ss_pred             cccc---cccccccc---chhhHHHHHHHHHHHHHHHHHHHHHcC----CC----cc-----eehhHHHHHHHHHHHHHH
Confidence            4222   11111100   011112222222111111111233321    00    11     112223334443333333


Q ss_pred             HHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccC
Q 020283          208 AKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLC  287 (328)
Q Consensus       208 aK~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~  287 (328)
                      ..-     +   .. ..+.....+..++..+.. ..+..+...+++++......++.-...++++++.|..+++|..+  
T Consensus       198 ~~~-----~---~~-~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~--  265 (290)
T TIGR00776       198 LGH-----I---LA-KPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKT--  265 (290)
T ss_pred             HHH-----h---cc-cchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCC--
Confidence            322     0   11 112222333333343443 56666667788855555666666777799999999999999654  


Q ss_pred             ccch
Q 020283          288 LSPF  291 (328)
Q Consensus       288 ~~~~  291 (328)
                      +.++
T Consensus       266 ~~~~  269 (290)
T TIGR00776       266 KREM  269 (290)
T ss_pred             ccee
Confidence            4444

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.33  E-value=3.4e-06  Score=70.58  Aligned_cols=111  Identities=17%  Similarity=0.235  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhccc-------------------CCCCCCCCCccccccccccchhH---HHHHHHH
Q 020283            9 FINLVGSIAINFGTNLLKLGHIEREKHS-------------------TLDSDGTNGKHSLKPIVHYHSWR---VGILVFL   66 (328)
Q Consensus         9 ~Lal~ssi~~a~G~~lqk~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~p~W~---~G~~l~~   66 (328)
                      +.|+.++++.+++.++-|-+.+..+..-                   ....+.. +.      ...+.|.   .+-+.-.
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~------~~~k~~lflilSGla~g   78 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GE------IGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecc-cc------cCcceehhhhHHHHHHH
Confidence            5788899999999999998865332110                   0000000 00      0111221   2224456


Q ss_pred             HHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           67 LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        67 ~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      ++..+-|.|+.-+++|.|+|+-.++.++..+++..++|||++..+|+|+.++++|++++.
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            777788999999999999999999999999999999999999999999999999988764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.28  E-value=3.3e-05  Score=73.39  Aligned_cols=122  Identities=10%  Similarity=-0.012  Sum_probs=86.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccC----------------CCCCCCCCccccccccccchh----HH
Q 020283            1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHST----------------LDSDGTNGKHSLKPIVHYHSW----RV   60 (328)
Q Consensus         1 m~~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~p~W----~~   60 (328)
                      |+....|..+.++++++.+.....-|... +.+..+.                ..++   +....++..+++++    ..
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~~-~~~~~~~~~~R~~~a~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   78 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLIY-YVPADEILTHRVIWSFFFMVVLMSICR---QWSYLKTLIQTPQKIFMLAV   78 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHcCHHHHHHHHH
Confidence            56677899999999998888888887542 1110000                0000   00000000112222    25


Q ss_pred             HHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        61 G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      |.....+...+.+.++...|.+...-+..+.=++..+++.+++|||+++++|.|.++...|+.++.
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            556677888999999999999999999999999999999999999999999999999999988654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.22  E-value=4.5e-06  Score=68.25  Aligned_cols=66  Identities=26%  Similarity=0.425  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe
Q 020283           61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        61 G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      |......++.+.+.|+.+.| ..+.|+.+++.+++.+++..++|||++++++.|+.++.+|+.++..
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44455588999999999999 5999999999999999999999999999999999999999887655

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.19  E-value=0.00023  Score=67.87  Aligned_cols=218  Identities=15%  Similarity=0.172  Sum_probs=124.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCC
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT  137 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t  137 (328)
                      |+.=-.++.++..++-.|+.+.|...-.-+-+...+++++++.+++|||.+++++.+++++++|+.+......++++..+
T Consensus        67 ~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~  146 (303)
T PF08449_consen   67 YAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSN  146 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccc
Confidence            33334566688899999999999999999999999999999999999999999999999999999988775443333222


Q ss_pred             hHHHHHHhcchhhHHHHHHH--HHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHH-HHHHHH
Q 020283          138 PEQLAEKYSNITFLVYCLIL--IFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFA-KSLSNL  214 (328)
Q Consensus       138 ~~el~~~~~~~~fl~y~~~~--~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~a-K~~~~~  214 (328)
                      .++.     ++.. -+..+.  .+.-+.. ..  ..|+...+++.+  .++   .+.|.-.-|+......... + -.+ 
T Consensus       147 ~~~~-----~~~~-G~~ll~~sl~~~a~~-~~--~qe~~~~~~~~~--~~~---~mfy~n~~~~~~~~~~~~~l~-~~~-  210 (303)
T PF08449_consen  147 SSSF-----SSAL-GIILLLLSLLLDAFT-GV--YQEKLFKKYGKS--PWE---LMFYTNLFSLPFLLILLFLLP-TGE-  210 (303)
T ss_pred             cccc-----cchh-HHHHHHHHHHHHHHH-HH--HHHHHHHHhCCc--HHH---HHHHHHHHHHHHHHHHHHHHH-hhH-
Confidence            2211     1111 111111  1111110 00  011111111111  122   3344333333322111111 1 011 


Q ss_pred             HHHHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhh
Q 020283          215 LRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKF  294 (328)
Q Consensus       215 l~~~~~g~~~~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~f  294 (328)
                      ..+.+  +....||..+..++....+...-+.+.+.-.+++++....-+ ...-...+++.+.++|++  ++++.+|...
T Consensus       211 ~~~~~--~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v-~t~Rk~~sillS~~~f~~--~~~~~~~~G~  285 (303)
T PF08449_consen  211 FRSAI--RFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIV-TTLRKFLSILLSVIIFGH--PLSPLQWIGI  285 (303)
T ss_pred             hhHHH--HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhH-HHHHHHHHHHHHHHhcCC--cCChHHHHHH
Confidence            11100  012367777666555544544444556677788777655444 445567788999999986  7888888855


Q ss_pred             hh
Q 020283          295 GA  296 (328)
Q Consensus       295 g~  296 (328)
                      ++
T Consensus       286 ~l  287 (303)
T PF08449_consen  286 VL  287 (303)
T ss_pred             HH
Confidence            44

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.06  E-value=0.00035  Score=66.33  Aligned_cols=67  Identities=15%  Similarity=0.181  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHhhc----hhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe
Q 020283           61 GILVFLLGNCLNFISFGYA----AQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        61 G~~l~~~g~~~~~~Al~~a----p~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      |.+.+.....+.+.++.++    |.+...-+..+.=++..++++.++|||++++++.|+++...|+.++..
T Consensus        67 ~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         67 GGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            3333334444445555443    445555666777788999999999999999999999999999887654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.04  E-value=0.0002  Score=67.98  Aligned_cols=67  Identities=16%  Similarity=0.212  Sum_probs=60.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      ...|+. +.+...++..++.+.+.+..+-+.+++-++.++++++++|||++++++.|..+.+.|+.+.
T Consensus        69 ~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        69 LPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            445555 5677888899999999999999999999999999999999999999999999999998753

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.03  E-value=0.00032  Score=66.39  Aligned_cols=202  Identities=14%  Similarity=0.071  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHHHH-hhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCCh
Q 020283           60 VGILVFLLGNCLNFISF-GYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTP  138 (328)
Q Consensus        60 ~G~~l~~~g~~~~~~Al-~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~  138 (328)
                      .|......+..+...+. ...|.....-+..+.=++..+++.+ +|||++++++.|..+..+|+.++.. + ++ .+.  
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~-~-~~-~~~--  147 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS-G-GN-LSG--  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc-C-cc-ccc--
Confidence            45554455566667777 7888888888888888888899875 7999999999999999999876532 1 11 111  


Q ss_pred             HHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 020283          139 EQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLA  218 (328)
Q Consensus       139 ~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~  218 (328)
                      +       .++. .+.....+..+......|+..       ++++.    ....+....   ++... ..  .. .    
T Consensus       148 ~-------~~G~-l~~l~a~~~~a~~~~~~~~~~-------~~~~~----~~~~~~~~~---~~~~~-~~--~~-~----  197 (292)
T PRK11272        148 N-------PWGA-ILILIASASWAFGSVWSSRLP-------LPVGM----MAGAAEMLA---AGVVL-LI--AS-L----  197 (292)
T ss_pred             c-------hHHH-HHHHHHHHHHHHHHHHHHhcC-------CCcch----HHHHHHHHH---HHHHH-HH--HH-H----
Confidence            1       0001 111111111111111223211       00000    011122111   11111 00  00 0    


Q ss_pred             hhcCc--cchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh---
Q 020283          219 MSNGY--QLHSWFTYS-MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL---  292 (328)
Q Consensus       219 ~~g~~--~~~~~~~y~-ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~---  292 (328)
                      ..+.+  ...++..|. ++...+.+........|+++++.+++.+... ....|+.+.+.|.++++|.  .+..+++   
T Consensus       198 ~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~--~t~~~iiG~~  274 (292)
T PRK11272        198 LSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGET--LSPIEWLALG  274 (292)
T ss_pred             HcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCC--CcHHHHHHHH
Confidence            11221  222344442 3333344445555677999999988766665 7788999999999999995  5666655   


Q ss_pred             --hhhhhhhc
Q 020283          293 --KFGATLSS  300 (328)
Q Consensus       293 --~fg~~l~~  300 (328)
                        ..|+.+.+
T Consensus       275 lIi~gv~~~~  284 (292)
T PRK11272        275 VIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHH
Confidence              23555544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.95  E-value=0.0011  Score=60.88  Aligned_cols=69  Identities=10%  Similarity=0.208  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHH-HHhccccccchhhhhhhhhhcceeEEee
Q 020283           60 VGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSY-FVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        60 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~-~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      .|......+..+.+.++...|.+..+++.+.+-++..+++. +++|||++++++.|..+...|+.++...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~  144 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG  144 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence            44455677778889999999999999999999999999997 6779999999999999999998876553

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.95  E-value=7.4e-05  Score=62.32  Aligned_cols=72  Identities=14%  Similarity=0.179  Sum_probs=65.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeec
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAAL-GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFG  129 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g  129 (328)
                      |+..+.++.++..+...|+...|+++..|+ .+++.+...+.+.+++||+++..+++|..+++.|++++=..+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            677778889999999999999999999999 569999999999999999999999999999999988765444

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.90  E-value=0.0022  Score=60.83  Aligned_cols=249  Identities=16%  Similarity=0.140  Sum_probs=126.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCC---CCCC----ccccccccccch----hHHHHHHHHHHHHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD---GTNG----KHSLKPIVHYHS----WRVGILVFLLGNCLNF   73 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~p~----W~~G~~l~~~g~~~~~   73 (328)
                      ..|+.+.+++.++.+.+.++-|.+..+.+..+...-+   +.-.    ....+.-.+++.    ++.|.. +...+.+.+
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~   89 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYLFY   89 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence            5678899999999999999999776532211000000   0000    000000011222    355553 556677778


Q ss_pred             HHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCCCCCCChHHHHHHhcchhhHHH
Q 020283           74 ISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY  153 (328)
Q Consensus        74 ~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~~~~~t~~el~~~~~~~~fl~y  153 (328)
                      .++...|.+...-+..++=++..+++    +|+.  .++.+..+...|+.+++..+.+ ....  + .      .+. ..
T Consensus        90 ~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~--~~~~~~~i~~~Gv~li~~~~~~-~~~~--~-~------~G~-ll  152 (293)
T PRK10532         90 LSIQTVPLGIAVALEFTGPLAVALFS----SRRP--VDFVWVVLAVLGLWFLLPLGQD-VSHV--D-L------TGA-AL  152 (293)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHh----cCCh--HHHHHHHHHHHHHheeeecCCC-cccC--C-h------HHH-HH
Confidence            88888888877655555555555554    3544  3456777788898776532211 1111  1 0      001 11


Q ss_pred             HHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhcCccchhHHHHH-
Q 020283          154 CLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYS-  232 (328)
Q Consensus       154 ~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~~~g~~~~~~~~~y~-  232 (328)
                      .....+..+......|+..+      +.++ .    ...+   ..++++. ++..  .. ..    .+.....++..|. 
T Consensus       153 ~l~aa~~~a~~~v~~r~~~~------~~~~-~----~~~~---~~~~~~~-~l~~--~~-~~----~~~~~~~~~~~~~~  210 (293)
T PRK10532        153 ALGAGACWAIYILSGQRAGA------EHGP-A----TVAI---GSLIAAL-IFVP--IG-AL----QAGEALWHWSILPL  210 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhc------cCCc-h----HHHH---HHHHHHH-HHHH--HH-HH----ccCcccCCHHHHHH
Confidence            11111111111112233210      0011 1    1111   1122221 1111  11 11    1211123344443 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhhhh
Q 020283          233 MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGA  296 (328)
Q Consensus       233 ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~fg~  296 (328)
                      ++...+.++..+....|+++++-+++.+.+. ....|+++.+.|.++++|  +.+..+++...+
T Consensus       211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE--~~~~~~~iG~~l  271 (293)
T PRK10532        211 GLAVAILSTALPYSLEMIALTRLPTRTFGTL-MSMEPALAAVSGMIFLGE--TLTLIQWLALGA  271 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhHHHHH-HHhHHHHHHHHHHHHhCC--CCcHHHHHHHHH
Confidence            2345566667777788999999998766655 667899999999999999  566777774433

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.80  E-value=0.00018  Score=59.06  Aligned_cols=71  Identities=14%  Similarity=0.206  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHhhh-hhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeec
Q 020283           59 RVGILVFLLGNCLNFISFGYAAQSLLAAL-GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFG  129 (328)
Q Consensus        59 ~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g  129 (328)
                      +..+..+.++..+...|+..-|.++..|. .+++.+.+.+.+.+++||+++..+++|..+++.|++++-..+
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45666778888888899999999999999 669999999999999999999999999999999988774433

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.78  E-value=0.0011  Score=65.14  Aligned_cols=60  Identities=13%  Similarity=0.302  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHH------hccccccchhhhhhhhhhcceeEEe
Q 020283           68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFV------FNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        68 g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~------l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      .+.+.+.++.+.|.+...-+..+.=++.+++++++      +|||+++++++|+++...|+.++..
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            33456789999999999999999999999999999      6999999999999999999886654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.75  E-value=0.0017  Score=63.28  Aligned_cols=76  Identities=12%  Similarity=0.243  Sum_probs=65.5

Q ss_pred             cccchhHHHHH--HHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEee
Q 020283           53 VHYHSWRVGIL--VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        53 ~~~p~W~~G~~--l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      .++|.|.-=++  +++.|+.+...||.+-+.+-++=|...+++++++++.+++|||.++.+++|+.+++.|+.+++..
T Consensus        75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            45555544332  35788888899999999999999999999999999999999999999999999999998877664

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.74  E-value=0.0029  Score=61.84  Aligned_cols=69  Identities=16%  Similarity=0.149  Sum_probs=58.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           57 SWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        57 ~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      ....|+.-. .+..+...++...+.+..+=+-+++=+++++++++++|||.+++.+.+.+++++|+.+.+
T Consensus       117 llp~gl~~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        117 FLPQGLCHL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            344444433 345556699999999999999999999999999999999999999999999999998765

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.73  E-value=0.00049  Score=64.11  Aligned_cols=69  Identities=17%  Similarity=0.351  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeec
Q 020283           61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFG  129 (328)
Q Consensus        61 G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g  129 (328)
                      =-++|.+.+.+.++++...|.+.-|=+...-++++++++.+++|+|+++++|.+..+.+.|++++-.-+
T Consensus        23 PA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   23 PALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            347899999999999999999999999999999999999999999999999999999999988766543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.69  E-value=0.00015  Score=68.85  Aligned_cols=127  Identities=13%  Similarity=0.065  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCC---CC------CCccccccccccc----hhHHHHHHHHHHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD---GT------NGKHSLKPIVHYH----SWRVGILVFLLGNCL   71 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~p----~W~~G~~l~~~g~~~   71 (328)
                      .+|.++++.++++.+.+..+.|+...+.+.... .-.   +.      .............    .++.|+...++++.+
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            569999999999999999998876543221000 000   00      0000000000011    246777778889999


Q ss_pred             HHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCC
Q 020283           72 NFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ  132 (328)
Q Consensus        72 ~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~  132 (328)
                      +..++...|.+.++++..+.-+++.+++.+++||+++..+++|.++++.|+.......+++
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999999999999999999988775544443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.57  E-value=0.00051  Score=54.53  Aligned_cols=85  Identities=15%  Similarity=0.081  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHH-HHHHHHHHHHHHHHhhchhHHHhhhh-h
Q 020283           12 LVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI-LVFLLGNCLNFISFGYAAQSLLAALG-S   89 (328)
Q Consensus        12 l~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl~-~   89 (328)
                      +.+.++-..|+...|+++..                      +++.|..+. .++.++..+...|+...|.++..|.- +
T Consensus         7 ~~a~~~ev~~~~~lK~s~g~----------------------~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g   64 (93)
T PF00893_consen    7 LLAILFEVVGTIALKASHGF----------------------TQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTG   64 (93)
T ss_dssp             HHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh----------------------cchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence            34445556677777874321                      122344444 46788889999999999999999975 5


Q ss_pred             hhHHHHHHHHHHHhccccccchhhhhhhh
Q 020283           90 VQFVSNIAFSYFVFNKMVTVKVLVATAFI  118 (328)
Q Consensus        90 ~~lv~~~~~a~~~l~E~~~~~~~~g~~li  118 (328)
                      ++.+...+.+.+++||+++..++.|..++
T Consensus        65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            99999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00688 rarD rarD protein

Probab=97.55  E-value=0.0053  Score=56.75  Aligned_cols=62  Identities=10%  Similarity=0.026  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        65 ~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      +..+..+.+.|+...|.+...-+..++=++.++++++++|||+++++|.|..+..+|+.++.
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            55677888999999999988888888889999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.48  E-value=0.003  Score=59.69  Aligned_cols=77  Identities=21%  Similarity=0.305  Sum_probs=64.0

Q ss_pred             hhHHHHHH---HHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccchhh----hhhhhhhcceeEEee
Q 020283           57 SWRVGILV---FLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLV----ATAFIVLGNIFLVSF  128 (328)
Q Consensus        57 ~W~~G~~l---~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~----g~~li~~G~~~iv~~  128 (328)
                      .|+.+++.   -.+|++.++.++...-.|.-.|+.. .+++.|.+.+.+++||.-+..+++    +.+++++|+.+-..-
T Consensus        44 ~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~  123 (269)
T PF06800_consen   44 SFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQ  123 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccc
Confidence            47777754   4699999999999999999999995 899999999999999998888776    567789998876665


Q ss_pred             cCCCC
Q 020283          129 GNHQS  133 (328)
Q Consensus       129 g~~~~  133 (328)
                      .++++
T Consensus       124 ~~~~~  128 (269)
T PF06800_consen  124 DKKSD  128 (269)
T ss_pred             ccccc
Confidence            44443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.43  E-value=0.00093  Score=61.39  Aligned_cols=119  Identities=15%  Similarity=0.140  Sum_probs=84.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC---C--C------CCCccccccccccchh----HHHHHHHHHH
Q 020283            4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDS---D--G------TNGKHSLKPIVHYHSW----RVGILVFLLG   68 (328)
Q Consensus         4 ~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~---~--~------~~~~~~~~~~~~~p~W----~~G~~l~~~g   68 (328)
                      ...|..+++.++++.+....++|+...+.+.....-.   .  +      ........+....+.|    +.|......+
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999999997643221000000   0  0      0000000000111223    2444556788


Q ss_pred             HHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcc
Q 020283           69 NCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGN  122 (328)
Q Consensus        69 ~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~  122 (328)
                      +.+++.++...|.+.+..+..+.-+++.+++.+++||+++..++.|+.+++.|+
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999999999999999999999999885

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.35  E-value=0.00017  Score=58.06  Aligned_cols=68  Identities=16%  Similarity=0.335  Sum_probs=61.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      ...|.+...+++.+...++...|.+.++++..+.-+++.+++..++||+++.+++.|+.+++.|+.++
T Consensus        57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            45566656789999999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.28  E-value=0.00093  Score=62.72  Aligned_cols=205  Identities=17%  Similarity=0.140  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe----ecCCCCCCCChHHHH
Q 020283           67 LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS----FGNHQSPVYTPEQLA  142 (328)
Q Consensus        67 ~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~----~g~~~~~~~t~~el~  142 (328)
                      .|..+...||...|++=..-..-.+=+++.++|..+||||.|+.|.+|+.....|+++++.    ||.+++++.+..   
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~---  185 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ---  185 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc---
Confidence            5556667788777776555455556688999999999999999999999999999999874    777666554432   


Q ss_pred             HHhcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhHHHHHHHHHHHHHHHhhcC
Q 020283          143 EKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNG  222 (328)
Q Consensus       143 ~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~svl~aK~~~~~l~~~~~g~  222 (328)
                      .-+..|...+-+.-++....+. .+.|.-++        +-+.  .+.+.|=..-+++          .+.+.-.+ -|.
T Consensus       186 ~~~~~~gt~aai~s~lf~asvy-IilR~iGk--------~~h~--~msvsyf~~i~lV----------~s~I~~~~-ig~  243 (346)
T KOG4510|consen  186 VEYDIPGTVAAISSVLFGASVY-IILRYIGK--------NAHA--IMSVSYFSLITLV----------VSLIGCAS-IGA  243 (346)
T ss_pred             ccccCCchHHHHHhHhhhhhHH-HHHHHhhc--------cccE--EEEehHHHHHHHH----------HHHHHHhh-ccc
Confidence            2234555433333222222222 23333211        0111  1112111111111          11111111 233


Q ss_pred             ccc-hhHHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhhhhhhhc
Q 020283          223 YQL-HSWFTYS-MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSS  300 (328)
Q Consensus       223 ~~~-~~~~~y~-ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~fg~~l~~  300 (328)
                      -|+ +.+.=|. ++.+.+.+.+.| .++.+|+|+-.+-- +.++.....+.+++=-+++|+|+.+  .|.|...-|..+|
T Consensus       244 ~~lP~cgkdr~l~~~lGvfgfigQ-IllTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~Pt--~ws~~Ga~~vvsS  319 (346)
T KOG4510|consen  244 VQLPHCGKDRWLFVNLGVFGFIGQ-ILLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWPT--IWSWVGAVMVVSS  319 (346)
T ss_pred             eecCccccceEEEEEehhhhhHHH-HHHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCCh--HHHhhceeeeehh
Confidence            332 2223333 333444455555 57999999865543 3456777788889999999999853  5666655454444

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.21  E-value=0.0013  Score=64.53  Aligned_cols=118  Identities=12%  Similarity=0.147  Sum_probs=84.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-------------------CCCCCCCCCccccccccc-cchhHHHHH
Q 020283            4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHS-------------------TLDSDGTNGKHSLKPIVH-YHSWRVGIL   63 (328)
Q Consensus         4 ~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~-~p~W~~G~~   63 (328)
                      +.+|..+++.++++.+++.++||+-..+.....                   ..++.   .   ...... -..+...++
T Consensus       187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~---~---~~~~~~~~~~~~~~i~  260 (358)
T PLN00411        187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN---N---PSVWIIHFDITLITIV  260 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC---C---cccceeccchHHHHHH
Confidence            577999999999999999999998654421100                   00000   0   000000 001111121


Q ss_pred             ----HHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe
Q 020283           64 ----VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        64 ----l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                          ...+++.+|..+....+.+.++...-+.=+++++++..++||+++..+++|+++++.|+.+...
T Consensus       261 y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        261 TMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence                1234777888899999999999999999999999999999999999999999999999887643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.21  E-value=0.0039  Score=51.14  Aligned_cols=69  Identities=12%  Similarity=0.117  Sum_probs=56.8

Q ss_pred             hhHHHH-HHHHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           57 SWRVGI-LVFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        57 ~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      .|...+ ..+.++..+--.|+..-|.++..+.=+ ++.+...+.+.+++||+++..++.|..+++.|++.+
T Consensus        36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344433 335667777778888999999999866 889999999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.03  E-value=0.0055  Score=49.90  Aligned_cols=66  Identities=15%  Similarity=0.123  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           60 VGILVFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        60 ~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      .-+.++.++..+-..|+..-|.++..+.=+ ++.+...+.+.++.||+++..++.|..+++.|++.+
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            334556777777788999999999998766 899999999999999999999999999999998765

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.99  E-value=0.0037  Score=59.20  Aligned_cols=115  Identities=11%  Similarity=0.095  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc-----------------CCCCCCCCCccccccccccchh----HHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHS-----------------TLDSDGTNGKHSLKPIVHYHSW----RVGIL   63 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~p~W----~~G~~   63 (328)
                      ..|..+++.++++.|.+...+|+...+.+...                 ..++    .. ...+  ....|    +.|+.
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~--~~~~~~~i~~l~i~  221 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGE----RL-TALP--TLSGFLALGYLAVF  221 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCC----cc-cccC--CHHHHHHHHHHHHH
Confidence            46999999999999999999998643211000                 0000    00 0000  00123    23445


Q ss_pred             HHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           64 VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        64 l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      ..++++.++..++...|.+.+..+..+.-+++++++.+++||+++..+++|+.+++.|+.+..
T Consensus       222 ~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        222 GSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            556778889999999999999999999999999999999999999999999999999987653

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.96  E-value=0.0068  Score=49.41  Aligned_cols=69  Identities=16%  Similarity=0.139  Sum_probs=57.9

Q ss_pred             hhHHHH-HHHHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           57 SWRVGI-LVFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        57 ~W~~G~-~l~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      .|.+.+ +.+.+++.+-..|+..-|+++..++=+ ++.+...+.+..++||+++..+++|..+++.|++.+
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            344444 446777777788999999999988754 899999999999999999999999999999998754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.94  E-value=0.0039  Score=59.14  Aligned_cols=113  Identities=10%  Similarity=0.046  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccc--------------CCCCCCCCCccccccccccc-hh----HHHHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHS--------------TLDSDGTNGKHSLKPIVHYH-SW----RVGILVF   65 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~p-~W----~~G~~l~   65 (328)
                      ..|..+++.++++.+.+.++.||-..+.....              ..++.   .   ..+  -++ .|    +.| ...
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~---~~~--~~~~~~~~l~~~~-~~t  225 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQ---P---AMV--FSLPAIIKLLLAA-AAM  225 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcC---c---ccc--CCHHHHHHHHHHH-HHH
Confidence            46999999999999999999998653321100              00000   0   000  011 12    222 234


Q ss_pred             HHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           66 LLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        66 ~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      ++++.++..++...|.+.+.++..+.-+++.+++..++||+++..+++|.++++.|+.+..
T Consensus       226 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        226 GFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            5678889999999999999999999999999999999999999999999999999987653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.73  E-value=0.0013  Score=61.83  Aligned_cols=119  Identities=12%  Similarity=0.036  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCC-C----CC--Ccc------ccccc-cccch----hHHHHHHHHH
Q 020283            6 IGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD-G----TN--GKH------SLKPI-VHYHS----WRVGILVFLL   67 (328)
Q Consensus         6 iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~-~----~~--~~~------~~~~~-~~~p~----W~~G~~l~~~   67 (328)
                      -|..+++.++++.+.+..+.|+.+.+.......... .    ..  ...      ..++. .....    .+.+.....+
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            366778889999999988888764322110000000 0    00  000      00000 00111    2334445567


Q ss_pred             HHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhccee
Q 020283           68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF  124 (328)
Q Consensus        68 g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~  124 (328)
                      ++.+++.++...|.+.+.++.-++-+++.+++.+++||+++..+++|..+++.|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            888999999999999999999999999999999999999999999999999999764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.67  E-value=0.0095  Score=56.57  Aligned_cols=121  Identities=12%  Similarity=0.125  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCC-C---------------CCCcccc-ccc-cccch-h----HHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD-G---------------TNGKHSL-KPI-VHYHS-W----RVG   61 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~-~---------------~~~~~~~-~~~-~~~p~-W----~~G   61 (328)
                      ..|+.+++.++++.+.+..++|+...+.+......-. .               .++.... .+. -.++. |    +.|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4699999999999999999999854321110000000 0               0000000 000 00112 2    234


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           62 ILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        62 ~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      +...++++.+++.++...+...+.++..+.=+++.+++.+++||+++..+++|.++++.|+.+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            4555677778888888888889999999998999999999999999999999999999998754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=95.87  E-value=0.016  Score=53.19  Aligned_cols=121  Identities=16%  Similarity=0.148  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCC-C----C-------CCCCccccccccc--cchhHHHHHHHHHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLD-S----D-------GTNGKHSLKPIVH--YHSWRVGILVFLLGNC   70 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~-~----~-------~~~~~~~~~~~~~--~p~W~~G~~l~~~g~~   70 (328)
                      ..|+.+++.++++.+...+.+|+-. +.......- -    .       ...... .....+  ...-+.|+....++..
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~  230 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYL  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999998654 110000000 0    0       000000 000000  0112334444456788


Q ss_pred             HHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe
Q 020283           71 LNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        71 ~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      +++.++...+.+.++++..+..+++.+++..+++|+++.++++|+++++.|+.+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            889999999999999999999999999999999999999999999999999775543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.84  E-value=0.15  Score=49.93  Aligned_cols=128  Identities=12%  Similarity=0.074  Sum_probs=85.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hcc-----------------cCCCCCCCCCccccccccccchhHHHHH-
Q 020283            3 EWVIGAFINLVGSIAINFGTNLLKLGHIER-EKH-----------------STLDSDGTNGKHSLKPIVHYHSWRVGIL-   63 (328)
Q Consensus         3 ~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~p~W~~G~~-   63 (328)
                      +..+|++..+++.++.+.=.+-|||...=+ |.-                 ....+.   -....+ -.....|..+++ 
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~---f~~~~~-~~~~~~~~~~~l~   79 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKVKKWSWETMWSVGGIFSWLILPWLIAALLLPD---FWAYYS-SFSGSTLLPVFLF   79 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHH-hcCHHHHHHHHHH
Confidence            457799999999999988888888732111 000                 000000   000000 011234555553 


Q ss_pred             --HHHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhcccc---c----cchhhhhhhhhhcceeEEeecCCCC
Q 020283           64 --VFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMV---T----VKVLVATAFIVLGNIFLVSFGNHQS  133 (328)
Q Consensus        64 --l~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~---~----~~~~~g~~li~~G~~~iv~~g~~~~  133 (328)
                        +-.+|++.++.+....-+|+-.|++. ++++.+.++...++||--   +    ..-.+|++++++|+.+....+...|
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence              45789999999999999999999987 899999999999998743   2    2345588999999888777554444


Q ss_pred             C
Q 020283          134 P  134 (328)
Q Consensus       134 ~  134 (328)
                      +
T Consensus       160 ~  160 (345)
T PRK13499        160 R  160 (345)
T ss_pred             c
Confidence            3

>COG2510 Predicted membrane protein [Function unknown]

Probab=95.78  E-value=0.015  Score=48.99  Aligned_cols=98  Identities=18%  Similarity=0.286  Sum_probs=59.8

Q ss_pred             hhhhhhhhhhhhhHHHHHHHHHH--------HHH-----------HHhhcCccch---hHHHHHHHHH-HHHHHHHHHHH
Q 020283          191 FSYAIVSGAVGSFSVLFAKSLSN--------LLR-----------LAMSNGYQLH---SWFTYSMLLL-FFSTAGFWMAR  247 (328)
Q Consensus       191 l~y~~~sgilg~~svl~aK~~~~--------~l~-----------~~~~g~~~~~---~~~~y~ll~~-~~~~~i~Ql~~  247 (328)
                      ..|+..|+...+.+.+++|-.-+        .++           ....|+.|-.   .+..|..++. .+.+.+-|+.|
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y   84 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY   84 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHH
Confidence            55666666666777767665543        111           1123443433   4444444333 34444444333


Q ss_pred             HHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          248 LNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       248 LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                       =+||+.++++.|+|+ --..+..+++.+..+++|..+  ..+|+
T Consensus        85 -f~ALk~G~as~VvPl-dk~svvl~~lls~lfL~E~ls--~~~~i  125 (140)
T COG2510          85 -FRALKKGKASRVVPL-DKTSVVLAVLLSILFLGERLS--LPTWI  125 (140)
T ss_pred             -HHHHhcCCcceEEEc-ccccHHHHHHHHHHHhcCCCC--HHHHH
Confidence             479999999999998 455677789999999999554  44444

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=95.53  E-value=0.025  Score=53.68  Aligned_cols=62  Identities=11%  Similarity=-0.022  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEe
Q 020283           66 LLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS  127 (328)
Q Consensus        66 ~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~  127 (328)
                      .+++.+++.++...|.+.++++.-+.-+++.+++.+++||+++..+++|..+++.|+.++..
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999999999999999999999999999999999999999888776654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.45  E-value=0.27  Score=48.00  Aligned_cols=69  Identities=13%  Similarity=0.266  Sum_probs=62.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      |-+=-++|.+-+-+.+++++-.|.+.-+....+-++.+.+++..+|+||+++++|...++...|+.++=
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            444456898888899999999999999999999999999999999999999999999999999998765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=94.75  E-value=1.5  Score=41.93  Aligned_cols=202  Identities=15%  Similarity=0.140  Sum_probs=111.8

Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHhhchhH---HHhhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhccee
Q 020283           49 LKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQS---LLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF  124 (328)
Q Consensus        49 ~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~s---lv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~  124 (328)
                      .+...|+|+-+....+..+-...|..-+-.+|-.   +=+.+|= +.=++|+++++.++|||+++.+|+.+.+..+|+..
T Consensus        62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~  141 (293)
T COG2962          62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLI  141 (293)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence            3346778888888877777777777777777755   3344444 23356899999999999999999999999999875


Q ss_pred             EEeecCCCCCCCChHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhcchhhhhhhhhhhhhhH
Q 020283          125 LVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFS  204 (328)
Q Consensus       125 iv~~g~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sgilg~~s  204 (328)
                      .....    +            +.+++.   +.+...--.+...|+.-.                   .....|+.-=.-
T Consensus       142 ~~~~~----g------------~lpwva---l~la~sf~~Ygl~RK~~~-------------------v~a~~g~~lE~l  183 (293)
T COG2962         142 QTWLL----G------------SLPWVA---LALALSFGLYGLLRKKLK-------------------VDALTGLTLETL  183 (293)
T ss_pred             HHHHc----C------------CCcHHH---HHHHHHHHHHHHHHHhcC-------------------CchHHhHHHHHH
Confidence            43321    1            112221   111111112223333210                   011112111111


Q ss_pred             HHHHHHHHHHHHHHhhcCc---cchhHHHHHHHHH-HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhc
Q 020283          205 VLFAKSLSNLLRLAMSNGY---QLHSWFTYSMLLL-FFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYF  280 (328)
Q Consensus       205 vl~aK~~~~~l~~~~~g~~---~~~~~~~y~ll~~-~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f  280 (328)
                      .++-=++.-++-.  ++..   +..++..+.++++ .++|++- +.....|-++-+.+.+ =+.|=..|+.-.+.+..+|
T Consensus       184 ~l~p~al~yl~~l--~~~~~~~~~~~~~~~~LLv~aG~vTavp-L~lf~~aa~~lpls~~-G~lqYi~Ptl~fllav~i~  259 (293)
T COG2962         184 LLLPVALIYLLFL--ADSGQFLQQNANSLWLLLVLAGLVTAVP-LLLFAAAAKRLPLSTL-GFLQYIEPTLMFLLAVLIF  259 (293)
T ss_pred             HHhHHHHHHHHHH--hcCchhhhcCCchHHHHHHHhhHHHHHH-HHHHHHHHhcCCHHHH-HHHHHHHHHHHHHHHHHHc
Confidence            1122222222221  2222   2245566655555 4555544 4445566666665443 3445556778899999999


Q ss_pred             ccccccCccchhhh
Q 020283          281 QEYQVLCLSPFLKF  294 (328)
Q Consensus       281 ~E~~~~~~~~~~~f  294 (328)
                      +|  +++..+...|
T Consensus       260 ~E--~~~~~~~~~F  271 (293)
T COG2962         260 GE--PFDSDQLVTF  271 (293)
T ss_pred             CC--CCCHHHHHHH
Confidence            99  5666666654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=94.61  E-value=0.053  Score=51.56  Aligned_cols=115  Identities=15%  Similarity=0.182  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC---CCC----CC----ccc--cccccccchhH----HHHHHHHH
Q 020283            5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDS---DGT----NG----KHS--LKPIVHYHSWR----VGILVFLL   67 (328)
Q Consensus         5 ~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~---~~~----~~----~~~--~~~~~~~p~W~----~G~~l~~~   67 (328)
                      ..|+..++++++..+.-...-|+.+.+.     .+.   +..    .+    ..+  .+|. ..+.+|    .|+. ..+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~-~~i  223 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAFGVDG-----LSVLLPQAIGMVIGGIIFNLGHILAKPL-KKYAILLNILPGLM-WGI  223 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCCCc-----ceehhHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHH-HHH
Confidence            4588888888888888777777543111     000   000    00    000  0111 122333    4444 467


Q ss_pred             HHHHHHHHHh-hchhHHHhhhhhhhHHHHHHHHHHHhccccccchh----hhhhhhhhcceeEE
Q 020283           68 GNCLNFISFG-YAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVL----VATAFIVLGNIFLV  126 (328)
Q Consensus        68 g~~~~~~Al~-~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~----~g~~li~~G~~~iv  126 (328)
                      ++.+.+.+.. ..+.+...++.....+.+.+.+.+++||+.+++++    +|.++++.|+.++.
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            7777788888 89999999999999999999999999999999999    99999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=94.54  E-value=0.31  Score=46.48  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=64.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEee
Q 020283           58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        58 W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      ...=.++.+.|..+..+.|....+|--|-+-+.-++|.-+++..+||++++.++|+|...+.+|.+.+...
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            44456889999999999999999999999999999999999999999999999999999999998877664

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.46  E-value=0.34  Score=39.63  Aligned_cols=65  Identities=12%  Similarity=0.004  Sum_probs=48.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          225 LHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       225 ~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                      +++|...........+...-.+++..++++-|.+..+|+.+ .-++.+.+.|..+|+|  +.+..+++
T Consensus        31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E--~ls~~~~~   95 (111)
T PRK15051         31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHE--PVSPRHWC   95 (111)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHH
Confidence            44554433334444444556777899999999999999999 7777889999999999  56666666

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.46  E-value=0.17  Score=39.94  Aligned_cols=53  Identities=19%  Similarity=0.157  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhh
Q 020283          240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKF  294 (328)
Q Consensus       240 ~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~f  294 (328)
                      +-..-.+++.+|+|+-|.++.+|+....=++...+.|..+|+|  +.+..+++..
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E--~~s~~~~~gi   90 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE--SLSLSKWLGI   90 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHhhe
Confidence            4455568899999999999999999988899999999999999  4555555433

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=94.03  E-value=0.23  Score=41.75  Aligned_cols=118  Identities=16%  Similarity=0.199  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhh----hccc---------------------CCCCCCCCC--ccccccccc-cchh
Q 020283            7 GAFINLVGSIAINFGTNLLKLGHIER----EKHS---------------------TLDSDGTNG--KHSLKPIVH-YHSW   58 (328)
Q Consensus         7 Gv~Lal~ssi~~a~G~~lqk~~~~~~----~~~~---------------------~~~~~~~~~--~~~~~~~~~-~p~W   58 (328)
                      |.++++.|+++.++=.+++|+...+.    ++.+                     ..|+.....  ....+.-.+ .+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999999887764    1110                     001000000  000000000 1122


Q ss_pred             HHHHHH-HH---HHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhccee
Q 020283           59 RVGILV-FL---LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF  124 (328)
Q Consensus        59 ~~G~~l-~~---~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~  124 (328)
                      +.-+.. -+   +-+...+..+...+...-.=++.+--+...+++..+++|++|..++.|.++.+.|+.+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            222211 22   3444556677777777777888888899999999999999999999999999999753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=93.99  E-value=0.29  Score=47.84  Aligned_cols=128  Identities=15%  Similarity=0.166  Sum_probs=77.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCC---------CccccccccccchhHHHHHHHHHH-HHHH
Q 020283            3 EWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTN---------GKHSLKPIVHYHSWRVGILVFLLG-NCLN   72 (328)
Q Consensus         3 ~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~W~~G~~l~~~g-~~~~   72 (328)
                      +..+|-++++.|+++.|+..++|++-.++.++.+.-..-|.-         ..-... -+++-.|=.......+| .++.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~-~i~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERS-GIESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehh-hhhccCCChhhHHHHHHHHHHH
Confidence            457899999999999999999999876654322100000000         000000 01111122222333333 3455


Q ss_pred             HHHHhhchhHHH------hhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCC
Q 020283           73 FISFGYAAQSLL------AALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH  131 (328)
Q Consensus        73 ~~Al~~ap~slv------~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~  131 (328)
                      +.-|...|..+-      .-++- ++-++++++..++.|++++..-++|-+++++|.++.....++
T Consensus       244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            677777777542      22222 357889999999999999999999999999998766554433

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.31  E-value=0.29  Score=48.27  Aligned_cols=60  Identities=13%  Similarity=0.103  Sum_probs=53.3

Q ss_pred             HHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCCC
Q 020283           73 FISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ  132 (328)
Q Consensus        73 ~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~~  132 (328)
                      =.||++-.++-..=+.+.+=+|.+.++..+.+||+|..+.++..+.+.|++++...+.++
T Consensus       177 naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  177 NAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            368999999999999999999999999999999999999999999999998777655444

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=92.18  E-value=1.2  Score=37.43  Aligned_cols=64  Identities=14%  Similarity=0.170  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhh-hhcccccccCccchh-----hhhhhhhccc
Q 020283          237 FFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGF-VYFQEYQVLCLSPFL-----KFGATLSSRF  302 (328)
Q Consensus       237 ~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~-i~f~E~~~~~~~~~~-----~fg~~l~~~~  302 (328)
                      .+.+......+.+.++++.|.+..+|+....+....+.+-. ++|+|  +.+..+++     ..|+.+.++.
T Consensus        54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E--~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE--TFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHhccC
Confidence            33444455566699999999999999998887555554444 48999  56666666     3488777653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=90.04  E-value=0.25  Score=46.74  Aligned_cols=56  Identities=14%  Similarity=0.228  Sum_probs=47.9

Q ss_pred             HHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeE
Q 020283           70 CLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL  125 (328)
Q Consensus        70 ~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~i  125 (328)
                      ..++.++...+.+...-.+.+.=++.++++.+++||+++..+++|.++++.|+.+.
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~  291 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY  291 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence            44456777888888888888888889999999999999999999999999998654

specificities overlap.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=89.96  E-value=11  Score=35.61  Aligned_cols=74  Identities=15%  Similarity=0.115  Sum_probs=47.3

Q ss_pred             cchhHHHHH-HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhhhhhhhc
Q 020283          224 QLHSWFTYS-MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFGATLSS  300 (328)
Q Consensus       224 ~~~~~~~y~-ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~fg~~l~~  300 (328)
                      .+.+|..-. -+.+.+.+...--..=.-||++-++. ..-+..+.+|..+.+.|.++++|  +.+..||....+.+..
T Consensus       202 ~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~-~F~~LlSLePa~aAl~G~i~L~e--~ls~~qwlaI~~ViaA  276 (292)
T COG5006         202 ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPAR-TFGTLLSLEPALAALSGLIFLGE--TLTLIQWLAIAAVIAA  276 (292)
T ss_pred             hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChh-HHHHHHHhhHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHH
Confidence            344555432 22333333333333335677777764 45677889999999999999999  6678888876554444

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=89.95  E-value=1.1  Score=36.64  Aligned_cols=65  Identities=9%  Similarity=0.083  Sum_probs=50.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhh
Q 020283          224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLK  293 (328)
Q Consensus       224 ~~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~  293 (328)
                      .+++|.+....++   +...-.+++.+|+|+-|..+.+|+-...=++...+.|.++|+|  +.+..+++.
T Consensus        31 gf~~~~~~~~~~~---~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e--~~~~~~~~g   95 (109)
T PRK10650         31 GFRRKIYGILSLA---AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQ--RLNRKGWIG   95 (109)
T ss_pred             CCcchHHHHHHHH---HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHHHHH
Confidence            4677776544433   3344567899999999999999999999999999999999999  455555553

>TIGR00803 nst UDP-galactose transporter

Probab=89.94  E-value=1.5  Score=39.61  Aligned_cols=118  Identities=9%  Similarity=0.029  Sum_probs=77.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-------------------cCCCCCCCCCccccccccc-cchhHHHHH
Q 020283            4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKH-------------------STLDSDGTNGKHSLKPIVH-YHSWRVGIL   63 (328)
Q Consensus         4 ~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~p~W~~G~~   63 (328)
                      ...|+...+.+..+.++..+.|++..++++..                   ...++.  +.......... .+.+|.=.+
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDG--TLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhccc--chhhccCcccCCchHHHHHHH
Confidence            35566667777777788889998875543210                   000000  00000000011 122333334


Q ss_pred             HHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcce
Q 020283           64 VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNI  123 (328)
Q Consensus        64 l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~  123 (328)
                      +...+.++-...+..++-....=..++..+.+.+++.++++|+++...+.|+.++..|+.
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            445666666778888888889889999999999999999999999999999999998865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=89.38  E-value=0.17  Score=41.22  Aligned_cols=77  Identities=18%  Similarity=0.260  Sum_probs=61.6

Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHhhchhHHHhhhhh-hhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEE
Q 020283           50 KPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV  126 (328)
Q Consensus        50 ~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl~~-~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv  126 (328)
                      +..+.+-..|+=+++---|+.+-+.-|+-+|.++-.|... +++.|+.+++..+-.|.-.++.+.|+.++++|+.+.+
T Consensus        47 ~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   47 KTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            3455566778888888889999999999999999999865 7999999999665444446666779999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=89.20  E-value=1.5  Score=35.71  Aligned_cols=64  Identities=13%  Similarity=-0.015  Sum_probs=50.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       224 ~~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                      .|+++.++...++   +...-.+++.+|+|.-|..+.+++-...=+....+.|.++|+|  +.+..+++
T Consensus        25 gf~~~~~~~~~i~---~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e--~~~~~~~~   88 (105)
T PRK11431         25 GFSRLTPSIITVT---AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE--SASPARLL   88 (105)
T ss_pred             CCccHHHHHHHHH---HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHH
Confidence            4677777655533   3344567899999999999999999988899999999999999  45555555

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=88.00  E-value=0.76  Score=43.58  Aligned_cols=61  Identities=23%  Similarity=0.316  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhh----hhhhhhhcce
Q 020283           63 LVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLV----ATAFIVLGNI  123 (328)
Q Consensus        63 ~l~~~g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~----g~~li~~G~~  123 (328)
                      ++...|+++.+++-...-+..-.|++.++++.+.+-+-+++||+=+++|+.    |.++++.|.+
T Consensus       203 ~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  203 LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            556789999999988999999999999999999999999999999999875    6677777754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=86.55  E-value=1.6  Score=41.13  Aligned_cols=124  Identities=12%  Similarity=0.031  Sum_probs=81.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hcccCCCCCC--------C-CCcccccccccc-chhHHHHHHHH----H
Q 020283            3 EWVIGAFINLVGSIAINFGTNLLKLGHIER-EKHSTLDSDG--------T-NGKHSLKPIVHY-HSWRVGILVFL----L   67 (328)
Q Consensus         3 ~~~iGv~Lal~ssi~~a~G~~lqk~~~~~~-~~~~~~~~~~--------~-~~~~~~~~~~~~-p~W~~G~~l~~----~   67 (328)
                      ....|+.+|+.+..+-+.=.+.=||..... .....  .-+        . -+...-.+.+.+ +.-..++..-+    +
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~--a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGV--AVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHH--HHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhccc
Confidence            457899999999888776666666554211 00000  000        0 000000111222 23344444433    4


Q ss_pred             HHHHHHHHHhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEee
Q 020283           68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        68 g~~~~~~Al~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      =+.+..+|+.-.|...-.-+.++-=.+..+.+..++||++|..||+|+.+++.++.....-
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence            4677899999999999999999888889999999999999999999999999988765553

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=86.32  E-value=2.5  Score=34.58  Aligned_cols=72  Identities=8%  Similarity=0.018  Sum_probs=52.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh-----hhhhhh
Q 020283          224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL-----KFGATL  298 (328)
Q Consensus       224 ~~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~-----~fg~~l  298 (328)
                      .++++.+....+   .+...-.+++.+++++-|....+|+-...=++...+.|.++|+|.  .+..+++     +.|+.+
T Consensus        26 gf~~~~~~i~~~---~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~--~~~~~~~gi~lIi~GVi~  100 (110)
T PRK09541         26 GFTRLWPSVGTI---ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR--LDLPAIIGMMLICAGVLV  100 (110)
T ss_pred             CCCchhHHHHHH---HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHHHHH
Confidence            366666654433   334455677899999999999999998888899999999999994  4555555     336655


Q ss_pred             hc
Q 020283          299 SS  300 (328)
Q Consensus       299 ~~  300 (328)
                      ..
T Consensus       101 l~  102 (110)
T PRK09541        101 IN  102 (110)
T ss_pred             Hh
Confidence            53

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=86.20  E-value=4.5  Score=32.91  Aligned_cols=48  Identities=21%  Similarity=0.285  Sum_probs=38.8

Q ss_pred             HHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCC
Q 020283           83 LLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH  131 (328)
Q Consensus        83 lv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~  131 (328)
                      +-+.-|.+=++.+++-....-|.+.++.||.|...+.+|+.+ +.++|.
T Consensus        60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v-il~~pR  107 (109)
T COG1742          60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV-ILFGPR  107 (109)
T ss_pred             HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee-eEeCCC
Confidence            456667777788888888888999999999999999999664 455654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=84.84  E-value=1.8  Score=41.28  Aligned_cols=77  Identities=14%  Similarity=0.332  Sum_probs=59.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHhhchh-HHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCC
Q 020283           55 YHSWRVGILVFLLGNCLNFISFGYAAQ-SLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH  131 (328)
Q Consensus        55 ~p~W~~G~~l~~~g~~~~~~Al~~ap~-slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~  131 (328)
                      .+.|..-..++-..++.|=.|+.|.=. -+=.-+-+-+++.|+.++..++|+|-+.+++..++.+++|+++.-.+..+
T Consensus        64 lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~  141 (330)
T KOG1583|consen   64 LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSK  141 (330)
T ss_pred             hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCc
Confidence            356777777777788888888887521 11122345589999999999999999999999999999999877665544

>PRK02237 hypothetical protein; Provisional

Probab=83.84  E-value=4.2  Score=33.27  Aligned_cols=48  Identities=15%  Similarity=0.207  Sum_probs=38.1

Q ss_pred             HHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEeecCC
Q 020283           83 LLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH  131 (328)
Q Consensus        83 lv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~g~~  131 (328)
                      +-+.-|.+=++.+++-....-|++.++.|++|..++.+|+.++ .++|.
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR  108 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence            3445566667778888889999999999999999999998855 45553

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=83.69  E-value=1.5  Score=34.69  Aligned_cols=53  Identities=9%  Similarity=0.072  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          237 FFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       237 ~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                      ...+...-..+.++|+++-+++.+.++.+ ..++.+.+.|.++++|.  .+..+++
T Consensus        60 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~--~~~~~~~  112 (126)
T PF00892_consen   60 GLLGTALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGER--PSWRQII  112 (126)
T ss_pred             hccceehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCC--CCHHHHH
Confidence            33333444556789999999999998877 79999999999999995  4555555

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=83.11  E-value=3.5  Score=33.65  Aligned_cols=66  Identities=14%  Similarity=0.132  Sum_probs=49.0

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchhhhh
Q 020283          225 LHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFLKFG  295 (328)
Q Consensus       225 ~~~~~~y~ll~~~~~~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~~fg  295 (328)
                      |+++.++.+.++   +...-.++|.+|+|.-|..+.+++-.-.=+....+.|.++|+|  +.+..+++..+
T Consensus        27 f~~~~~~il~~v---~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E--~l~~~~~~gl~   92 (106)
T COG2076          27 FTRLWPSILTIV---GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE--SLSLIKLLGLA   92 (106)
T ss_pred             ccccchHHHHHH---HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC--cCCHHHHHHHH
Confidence            555555543333   3344467889999999999999999999999999999999999  55566665443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=82.18  E-value=4.9  Score=38.16  Aligned_cols=121  Identities=12%  Similarity=0.072  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC----------------C--CCCCccccccccccchhHHHHHHH
Q 020283            4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDS----------------D--GTNGKHSLKPIVHYHSWRVGILVF   65 (328)
Q Consensus         4 ~~iGv~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~----------------~--~~~~~~~~~~~~~~p~W~~G~~l~   65 (328)
                      +..|+++.+++-++.++-.+.|++-..+.++++.+.=                .  ..+..+..+-..+.|..+.-+.+.
T Consensus       152 ~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~  231 (303)
T PF08449_consen  152 SALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF  231 (303)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence            4569999999999999999999988765543210000                0  000001111122334444443333


Q ss_pred             -HHHHHHHHHH---HhhchhHHHhhhhhhhHHHHHHHHHHHhccccccchhhhhhhhhhccee
Q 020283           66 -LLGNCLNFIS---FGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF  124 (328)
Q Consensus        66 -~~g~~~~~~A---l~~ap~slv~Pl~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~  124 (328)
                       ..+.+++..-   ...-......-...+--+.+.+++..+.+++++...|.|..++..|..+
T Consensus       232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~  294 (303)
T PF08449_consen  232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL  294 (303)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence             3444444222   2222222333344455677888999999999999999999999998654

; GO: 0055085 transmembrane transport

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=80.41  E-value=4.9  Score=33.49  Aligned_cols=59  Identities=14%  Similarity=0.058  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh-----hhhhhhhc
Q 020283          240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL-----KFGATLSS  300 (328)
Q Consensus       240 ~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~-----~fg~~l~~  300 (328)
                      +...-.+++.+++|.-|..+.+|+....=++...+.|.++|+|  +.+..+++     +.|+.+..
T Consensus        39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E--~~s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE--SLSLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHhh
Confidence            3445567889999999999999998888888899999999999  45555555     33665554

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=80.02  E-value=13  Score=29.87  Aligned_cols=46  Identities=17%  Similarity=0.176  Sum_probs=33.6

Q ss_pred             HHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh
Q 020283          243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL  292 (328)
Q Consensus       243 ~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~  292 (328)
                      .+......|++..+ ..+.| .....++.+.+.|.++|+|  +.+..++.
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~-i~~~~pi~~~ll~~~~~~e--r~~~~~~~   92 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAA-IFSLSPIFTALLSWLFFKE--RLSPRRWL   92 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHH-HHHHHHHHHHHHHHHHhcC--CCCHHHHH
Confidence            33445578888888 45554 4556999999999999999  55555555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	328
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.82
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.72
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	95.08
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	94.52

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.82  E-value=1.4e-08  Score=81.99  Aligned_cols=99  Identities=15%  Similarity=0.151  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhchhHHHhhh-
Q 020283            9 FINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAAL-   87 (328)
Q Consensus         9 ~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-   87 (328)
                      ++.+++.++-+.|+...|++..                 ..    +.+.++.+...+.+++.+...|+...|++.+.|+ 
T Consensus         5 l~l~~a~~~e~~~~~~lK~s~~-----------------~~----~~~~~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~   63 (110)
T 3b5d_A            5 IYLGGAILAEVIGTTLMKFSEG-----------------FT----RLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIW   63 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC-----------------cc----hHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHH
Confidence            4456777888999999998631                 00    1234678888899999999999999999999999 


Q ss_pred             hhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEee
Q 020283           88 GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        88 ~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      .+++.++..+++.+++||+++..+++|+.+++.|+.++-..
T Consensus        64 ~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           64 SGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            89999999999999999999999999999999998877553

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.72  E-value=1.2e-08  Score=85.77  Aligned_cols=99  Identities=15%  Similarity=0.147  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhchhHHHhhh-
Q 020283            9 FINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAAL-   87 (328)
Q Consensus         9 ~Lal~ssi~~a~G~~lqk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~W~~G~~l~~~g~~~~~~Al~~ap~slv~Pl-   87 (328)
                      ++.+++.++-+.|+.+.|++...                 .    +.+.++.|++++++++.++..++...|++.+.|+ 
T Consensus         5 l~Ll~ail~ev~~~~~lK~s~g~-----------------~----~~~~~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw   63 (137)
T 2i68_A            5 IYLGGAILAEVIGTTLMKFSEGF-----------------T----RLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIW   63 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC---------------------------------CHHHHHHHHHHHHHHHHHC-----CHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc-----------------c----hHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHH
Confidence            34566778889999999986310                 0    1234678999999999999999999999999999 


Q ss_pred             hhhhHHHHHHHHHHHhccccccchhhhhhhhhhcceeEEee
Q 020283           88 GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF  128 (328)
Q Consensus        88 ~~~~lv~~~~~a~~~l~E~~~~~~~~g~~li~~G~~~iv~~  128 (328)
                      .+++.+++.+++.+++||+++..+++|+++++.|+.++...
T Consensus        64 ~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           64 SGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            89999999999999999999999999999999999877553

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=95.08  E-value=0.12  Score=40.98  Aligned_cols=61  Identities=10%  Similarity=0.042  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh-----hhhhhhhccc
Q 020283          240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL-----KFGATLSSRF  302 (328)
Q Consensus       240 ~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~-----~fg~~l~~~~  302 (328)
                      +...-.+++++|+|+.|.+..+|+....-++.+.+.|.++|+|  +.+..+++     ..|+.+....
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E--~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344456789999999999999999899999999999999999  55666666     3377666543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=94.52  E-value=0.055  Score=44.90  Aligned_cols=62  Identities=10%  Similarity=0.047  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHhhccccccchhhHHHHHHHHHHHhhhhhhcccccccCccchh-----hhhhhhhcccc
Q 020283          240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVLCLSPFL-----KFGATLSSRFN  303 (328)
Q Consensus       240 ~~i~Ql~~LN~aL~~~~~~~vvPi~~v~~~~~ai~~G~i~f~E~~~~~~~~~~-----~fg~~l~~~~~  303 (328)
                      +...-.+++++++++.|.+..+|+....-++.+.+.|.++|+|.  .+..+++     +.|+.+....+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~--ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR--LDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHhcCC
Confidence            33444567899999999999999988899999999999999994  5566665     34777776433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00