Citrus Sinensis ID: 020309

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHcccccccHHHHHHHHcccccccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccEEEEEcccccEEEEEEEcccccccEEEEEEccccccHHHHHHHHcccccccccccccHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHcccHHHHHHHHHHHHcccccccccccEEEEcccccccccccccEEEEEEccccccccHHHHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHccccEEEEEEcccccccccEEEEEcccccccHHHHHHHHcccccccccccccHHHHHHccc
Coil and Loop (DISEMBL)
MVFADIESLLSQAKREKmkkttavkpvherksrsnqvsssqdnwkgiptrlnniphsreirNYFYDDVLQATQRAVNDGRTRLKVeinipelnpemdvYRIGTLMELVRVIALSfaddgkrvKVCVQgsmgegalagmplqlagTRKIlefmdwgdygakgtfveigsiganevdeqddMFILVAPQNAVGNCIIDDMKAmtdaagtrpvilinprlkdlpgssgimqtmgRDKRLEYAASFENCYFFRLLYYagtqypimgalrmtypngyelykrvdvpsggeKYVILSTFtekpssddindaflgkprnrekkasgFWGFLSSVF
Flexible Loop (DISEMBL)
MVFADIESLLsqakrekmkkttavkpvherksrsnqvsssqdnwkgiptrlnniphsrEIRNYFYDDVLQATQRavndgrtrlkveinipelnpemdvYRIGTLMELVRVIALsfaddgkrVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGtrpvilinprlkdlpgssgIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILStftekpssddindaflgkprnrekkasgfwgflssvf
Low Complexity Region (SEG)
MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Disordered region (IsUnstruct)
************************************************TRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLP***GIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFT*************************FWGF*****
Disordered Region (DISOPRED)
*VFADIESLL*****************************************NNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTF***********DEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDI*******************GFLSSVF
Disordered Region (DISEMBL)
MVFADIESLLSQAK****************************NWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Disordered Region (DISPRO)
MVFADIESLLSQAKREKMK************************WKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGK*******************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
255565097	597	adenylate kinase, putative [Ricinus comm	1.0	0.549	0.807	1e-158
359484753	597	PREDICTED: uncharacterized protein LOC10	0.996	0.547	0.810	1e-157
296084582	652	unnamed protein product [Vitis vinifera]	0.893	0.449	0.866	1e-152
449493659	609	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.996	0.536	0.754	1e-148
356556590	591	PREDICTED: uncharacterized protein LOC10	0.957	0.531	0.767	1e-147
224144020	520	predicted protein [Populus trichocarpa]	0.908	0.573	0.807	1e-147
449443265	577	PREDICTED: uncharacterized protein LOC10	0.954	0.542	0.761	1e-146
356532999	1016	PREDICTED: uncharacterized protein LOC10	0.887	0.286	0.828	1e-145
22327339	588	adenylate kinase family protein [Arabido	0.960	0.535	0.719	1e-139
297801048	595	adenylate kinase family protein [Arabido	0.984	0.542	0.722	1e-138

>gi|255565097|ref|XP_002523541.1| adenylate kinase, putative [Ricinus communis] gi|223537248|gb|EEF38880.1| adenylate kinase, putative [Ricinus communis]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 265/328 (80%), Positives = 293/328 (89%)

Query: 1   MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREI 60
           +VF +I SLLSQ +++K +   +   + + +S  NQ S SQD W+GIPTRLNNIPHSREI
Sbjct: 270 VVFEEISSLLSQVQKDKEEPVKSKNLIPKSESSYNQASVSQDKWRGIPTRLNNIPHSREI 329

Query: 61  RNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGK 120
           R YFYDDVLQATQRAVNDGR RLKVEI IPELNPEMDVYRIGTLMELVRV+ALSFADDGK
Sbjct: 330 RTYFYDDVLQATQRAVNDGRMRLKVEIAIPELNPEMDVYRIGTLMELVRVLALSFADDGK 389

Query: 121 RVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDM 180
           RVKVCVQGSMG+GALAGMPLQL+GTRKILEFMDWGDYGA GTF+ IGSIGA EVDE DDM
Sbjct: 390 RVKVCVQGSMGQGALAGMPLQLSGTRKILEFMDWGDYGALGTFIRIGSIGAKEVDEDDDM 449

Query: 181 FILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAA 240
           FILVAPQNAVGNCIIDD++AMTDAAG+RPVIL+NPRLKDLPGSSGIMQTMGR +RLEYAA
Sbjct: 450 FILVAPQNAVGNCIIDDLRAMTDAAGSRPVILVNPRLKDLPGSSGIMQTMGRAERLEYAA 509

Query: 241 SFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSD 300
           SFENCY FRLLYY GTQYPIMGALRM+YP  YELYKRVD+P+ GEKY ILSTF+EKP+ D
Sbjct: 510 SFENCYSFRLLYYGGTQYPIMGALRMSYPYHYELYKRVDLPARGEKYEILSTFSEKPTGD 569

Query: 301 DINDAFLGKPRNREKKASGFWGFLSSVF 328
           DINDAFLG+ RN++KKASGFWGFLS V 
Sbjct: 570 DINDAFLGRSRNQDKKASGFWGFLSGVL 597

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484753|ref|XP_002264815.2| PREDICTED: uncharacterized protein LOC100256872 [Vitis vinifera]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/327 (81%), Positives = 291/327 (88%)

Query: 2   VFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIR 61
           VF  I+SLLS+ +++K       K +   +  SN  SSSQ+NW+GIPTRLNNIPHSREIR
Sbjct: 271 VFKPIDSLLSKMQQDKENMMKLEKSIRASERLSNLASSSQENWRGIPTRLNNIPHSREIR 330

Query: 62  NYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKR 121
            YFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRV+ALSFADDGK 
Sbjct: 331 TYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVLALSFADDGKH 390

Query: 122 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMF 181
           VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTF+ IGSIG+ EV+EQDD+F
Sbjct: 391 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGSKEVEEQDDLF 450

Query: 182 ILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAAS 241
           ILVAPQNAVGNCIIDD+KAMTDAAG RPVIL+NPRLKDLPGSSGIMQTMGRDKRLEYAAS
Sbjct: 451 ILVAPQNAVGNCIIDDLKAMTDAAGNRPVILVNPRLKDLPGSSGIMQTMGRDKRLEYAAS 510

Query: 242 FENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDD 301
           FENCYFFRLLYYAGTQYPIMGA+RM+YP  YELYKRVD   G EKY+ILST + +P+ D+
Sbjct: 511 FENCYFFRLLYYAGTQYPIMGAIRMSYPYRYELYKRVDESFGKEKYIILSTSSARPNIDE 570

Query: 302 INDAFLGKPRNREKKASGFWGFLSSVF 328
           INDAFLGKPR+  KKA+GFWGFLS + 
Sbjct: 571 INDAFLGKPRSEAKKATGFWGFLSGIL 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084582|emb|CBI25603.3| unnamed protein product [Vitis vinifera]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 254/293 (86%), Positives = 273/293 (93%)

Query: 36  QVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPE 95
           Q S SQ+NW+GIPTRLNNIPHSREIR YFYDDVLQATQRAVNDGRTRLKVEINIPELNPE
Sbjct: 360 QASLSQENWRGIPTRLNNIPHSREIRTYFYDDVLQATQRAVNDGRTRLKVEINIPELNPE 419

Query: 96  MDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG 155
           MDVYRIGTLMELVRV+ALSFADDGK VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG
Sbjct: 420 MDVYRIGTLMELVRVLALSFADDGKHVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWG 479

Query: 156 DYGAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINP 215
           DYGAKGTF+ IGSIG+ EV+EQDD+FILVAPQNAVGNCIIDD+KAMTDAAG RPVIL+NP
Sbjct: 480 DYGAKGTFINIGSIGSKEVEEQDDLFILVAPQNAVGNCIIDDLKAMTDAAGNRPVILVNP 539

Query: 216 RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELY 275
           RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGA+RM+YP  YELY
Sbjct: 540 RLKDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGAIRMSYPYRYELY 599

Query: 276 KRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 328
           KRVD   G EKY+ILST + +P+ D+INDAFLGKPR+  KKA+GFWGFLS + 
Sbjct: 600 KRVDESFGKEKYIILSTSSARPNIDEINDAFLGKPRSEAKKATGFWGFLSGIL 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493659|ref|XP_004159398.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226743 [Cucumis sativus]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/334 (75%), Positives = 287/334 (85%), Gaps = 7/334 (2%)

Query: 2   VFADIESLLSQAKREKMKKTTAVK-----P--VHERKSRSNQVSSSQDNWKGIPTRLNNI 54
           +F ++ SLLSQ +++++     ++     P  + E K   NQ S S+D+W+GIPTRLNNI
Sbjct: 276 IFEELSSLLSQIQKKRLXSQVMLRFLWNSPQFLPENKGTVNQPSESRDSWRGIPTRLNNI 335

Query: 55  PHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALS 114
           PHSREIR YFYDDVLQAT+RAV  GRTRLKVE NIPELNPEMDVYRIGTLMELVR IALS
Sbjct: 336 PHSREIRKYFYDDVLQATKRAVQAGRTRLKVENNIPELNPEMDVYRIGTLMELVRTIALS 395

Query: 115 FADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEV 174
           FADDG+RVKVC+QGSMGEGAL+GMPLQLAGTR+ILE+MDWG+YGA GTFV+IGSIGA EV
Sbjct: 396 FADDGRRVKVCIQGSMGEGALSGMPLQLAGTRRILEYMDWGEYGALGTFVKIGSIGAKEV 455

Query: 175 DEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDK 234
           D++DDMFILVAPQNAVGNCIIDDMKAMTDAAG RPVIL+NPRLKDLPGSSGIMQTMGR+K
Sbjct: 456 DDEDDMFILVAPQNAVGNCIIDDMKAMTDAAGDRPVILVNPRLKDLPGSSGIMQTMGREK 515

Query: 235 RLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFT 294
           RLEYAASFE CYFFRLLYYAGTQYPIMGALRM+YP GYELY+RVD PSG EKY+ LS + 
Sbjct: 516 RLEYAASFEICYFFRLLYYAGTQYPIMGALRMSYPYGYELYRRVDEPSGKEKYIELSKYP 575

Query: 295 EKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 328
           ++PS+DDINDAF G  R   K +SG WGFLS + 
Sbjct: 576 KRPSTDDINDAFQGNKRKEAKSSSGIWGFLSGIL 609

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556590|ref|XP_003546607.1| PREDICTED: uncharacterized protein LOC100818830 [Glycine max]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/327 (76%), Positives = 282/327 (86%), Gaps = 13/327 (3%)

Query: 2   VFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIR 61
           VF +IESLLSQ +++K+K   +   +             QD W+GIPTRLNNIPHSREIR
Sbjct: 278 VFKEIESLLSQLQQDKVKIIESGGMI-------------QDKWRGIPTRLNNIPHSREIR 324

Query: 62  NYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKR 121
            YFYDDVLQATQRA++DG+TR+KV+INIPELNPEMDVYRIGTLMELVR +ALSFADDGKR
Sbjct: 325 KYFYDDVLQATQRAISDGKTRVKVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKR 384

Query: 122 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMF 181
           VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTF+ IGSIGA EV+EQDDMF
Sbjct: 385 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDMF 444

Query: 182 ILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAAS 241
           ILVAPQNAVGNCIIDD++AMT+AA  RPVILIN RLKDLPGSSGIMQT+GRD+RL+YAAS
Sbjct: 445 ILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINARLKDLPGSSGIMQTIGRDQRLKYAAS 504

Query: 242 FENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDD 301
           FE+CYFFRLLYYAGTQYPIMGA+RMTYP  Y+LYKRVD   G EKYVILSTF E+P++D+
Sbjct: 505 FESCYFFRLLYYAGTQYPIMGAIRMTYPYQYDLYKRVDESPGKEKYVILSTFPERPTTDE 564

Query: 302 INDAFLGKPRNREKKASGFWGFLSSVF 328
           INDAF GKP    +K SG WGFLS + 
Sbjct: 565 INDAFQGKPSKDPRKTSGIWGFLSGIL 591

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144020|ref|XP_002325159.1| predicted protein [Populus trichocarpa] gi|222866593|gb|EEF03724.1| predicted protein [Populus trichocarpa]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/311 (80%), Positives = 279/311 (89%), Gaps = 13/311 (4%)

Query: 1   MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREI 60
           +VF +I+SLLSQ +R+++K   +               S QD W+GIPTRLNNIPHSREI
Sbjct: 223 VVFKEIDSLLSQVQRDEVKLVKSG-------------ISLQDKWRGIPTRLNNIPHSREI 269

Query: 61  RNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGK 120
           RNYFYDDVLQATQRAVNDGRTRL+V+INIPELNPEMDVYRIGTLMELVRVIALSF+DDGK
Sbjct: 270 RNYFYDDVLQATQRAVNDGRTRLRVDINIPELNPEMDVYRIGTLMELVRVIALSFSDDGK 329

Query: 121 RVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDM 180
            VKVCVQGSMG+GALAGMPLQLAGTR ILEFMDWGDYGAKGTF++IGSIG  EV E+DDM
Sbjct: 330 HVKVCVQGSMGKGALAGMPLQLAGTRNILEFMDWGDYGAKGTFIKIGSIGEQEVSEEDDM 389

Query: 181 FILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAA 240
           FILVAPQNAVGNCII+D+KAMT AAG+RPVILINP+LKDLPGSSGIMQTMGRDKRLEYAA
Sbjct: 390 FILVAPQNAVGNCIIEDLKAMTVAAGSRPVILINPKLKDLPGSSGIMQTMGRDKRLEYAA 449

Query: 241 SFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSD 300
           SFE+CYFFRLLYYAGTQYPIMGALRM+YP  YELYKRVD PSG EKY+ILSTF+EKPS+D
Sbjct: 450 SFESCYFFRLLYYAGTQYPIMGALRMSYPYRYELYKRVDQPSGTEKYMILSTFSEKPSTD 509

Query: 301 DINDAFLGKPR 311
           D+NDAF+G+PR
Sbjct: 510 DVNDAFMGRPR 520

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443265|ref|XP_004139400.1| PREDICTED: uncharacterized protein LOC101203230 [Cucumis sativus]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/327 (76%), Positives = 279/327 (85%), Gaps = 14/327 (4%)

Query: 2   VFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIR 61
           +F ++ SLLSQ ++EK  K+                +S  D+W+GIPTRLNNIPHSREIR
Sbjct: 265 IFEELSSLLSQIQKEKAMKSGN--------------ASFSDSWRGIPTRLNNIPHSREIR 310

Query: 62  NYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKR 121
            YFYDDVLQAT+RAV  GRTRLKVE NIPELNPEMDVYRIGTLMELVR IALSFADDG+R
Sbjct: 311 KYFYDDVLQATKRAVQAGRTRLKVENNIPELNPEMDVYRIGTLMELVRTIALSFADDGRR 370

Query: 122 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMF 181
           VKVC+QGSMGEGAL+GMPLQLAGTR+ILE+MDWG+YGA GTFV+IGSIGA EVD++DDMF
Sbjct: 371 VKVCIQGSMGEGALSGMPLQLAGTRRILEYMDWGEYGALGTFVKIGSIGAKEVDDEDDMF 430

Query: 182 ILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAAS 241
           ILVAPQNAVGNCIIDDMKAMTDAAG RPVIL+NPRLKDLPGSSGIMQTMGR+KRLEYAAS
Sbjct: 431 ILVAPQNAVGNCIIDDMKAMTDAAGDRPVILVNPRLKDLPGSSGIMQTMGREKRLEYAAS 490

Query: 242 FENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDD 301
           FE CYFFRLLYYAGTQYPIMGALRM+YP GYELY+RVD PSG EKY+ LS + ++PS+DD
Sbjct: 491 FEICYFFRLLYYAGTQYPIMGALRMSYPYGYELYRRVDEPSGKEKYIELSKYPKRPSTDD 550

Query: 302 INDAFLGKPRNREKKASGFWGFLSSVF 328
           INDAF G  R   K +SG WGFLS + 
Sbjct: 551 INDAFQGNKRKEAKSSSGIWGFLSGIL 577

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532999|ref|XP_003535056.1| PREDICTED: uncharacterized protein LOC100796331 [Glycine max]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 241/291 (82%), Positives = 265/291 (91%)

Query: 38   SSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMD 97
            S+  DNW+GIPTRLNNIPHSREIR YFYDDVLQATQRA+NDG+TR+KV+INIPELNPEMD
Sbjct: 726  SAEADNWRGIPTRLNNIPHSREIRKYFYDDVLQATQRAINDGKTRVKVDINIPELNPEMD 785

Query: 98   VYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY 157
            VYRIGTLMELVR +ALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY
Sbjct: 786  VYRIGTLMELVRTLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDY 845

Query: 158  GAKGTFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRL 217
            GAKGTF+ IGSIGA EV+E+DDMFILVAPQNAVGNCIIDD++AMT+AA  RPVILIN RL
Sbjct: 846  GAKGTFINIGSIGAAEVEEEDDMFILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINARL 905

Query: 218  KDLPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKR 277
            KDLPGSSGIMQTMGRD+RL+YAASFE+CYFFRLLYYAGTQYPIMGA+RMTYP  YELYKR
Sbjct: 906  KDLPGSSGIMQTMGRDQRLKYAASFESCYFFRLLYYAGTQYPIMGAIRMTYPYQYELYKR 965

Query: 278  VDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFWGFLSSVF 328
            VD   G EKY ILSTF E+P++D+INDAF GKP    +K SG WGFL+ + 
Sbjct: 966  VDESPGKEKYAILSTFPERPTTDEINDAFEGKPSKDPRKTSGIWGFLNGIL 1016

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327339|ref|NP_198367.2| adenylate kinase family protein [Arabidopsis thaliana] gi|17979434|gb|AAL49859.1| putative adenylate kinase [Arabidopsis thaliana] gi|22136756|gb|AAM91697.1| putative adenylate kinase [Arabidopsis thaliana] gi|110740593|dbj|BAE98401.1| adenylate kinase -like protein [Arabidopsis thaliana] gi|332006553|gb|AED93936.1| adenylate kinase family protein [Arabidopsis thaliana]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/328 (71%), Positives = 276/328 (84%), Gaps = 13/328 (3%)

Query: 1   MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREI 60
           +VF + ++LLSQ + ++M KT    PV             QD W+GIPTRLNNIPHSR+I
Sbjct: 273 VVFEETQTLLSQIQLKRMIKTDKASPV-------------QDKWRGIPTRLNNIPHSRDI 319

Query: 61  RNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGK 120
           R YFY+DVLQAT R++ DG TRL+V+INIPELNPEMDVYRIGTLMELV+ +ALSFADDGK
Sbjct: 320 RAYFYEDVLQATIRSIKDGNTRLRVDINIPELNPEMDVYRIGTLMELVQALALSFADDGK 379

Query: 121 RVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDM 180
           RVKVCVQGSMGEGALAGMPLQLAGTRKILE+MDWGD    GTFV++G+IG  EVDE+DDM
Sbjct: 380 RVKVCVQGSMGEGALAGMPLQLAGTRKILEYMDWGDDETLGTFVKLGAIGGKEVDEEDDM 439

Query: 181 FILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAA 240
           FILVAPQNAVGNCIIDD++AMT AAG RPV+LINPRLKDLP SSGIMQTMGR++RLEYA 
Sbjct: 440 FILVAPQNAVGNCIIDDLQAMTTAAGKRPVVLINPRLKDLPASSGIMQTMGREQRLEYAL 499

Query: 241 SFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSD 300
           +F+NCY FRLLYY GTQYPIMGALRM+YP  YELYKRV+  +G EKYV+L+T+ E+P+ +
Sbjct: 500 TFDNCYVFRLLYYLGTQYPIMGALRMSYPYRYELYKRVNEENGKEKYVLLATYAERPTPE 559

Query: 301 DINDAFLGKPRNREKKASGFWGFLSSVF 328
            I+DAF GK R++ KKASG WGFLSSVF
Sbjct: 560 QIDDAFSGKSRDQSKKASGIWGFLSSVF 587

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801048|ref|XP_002868408.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314244|gb|EFH44667.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/331 (72%), Positives = 281/331 (84%), Gaps = 8/331 (2%)

Query: 1   MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQV---SSSQDNWKGIPTRLNNIPHS 57
           +VF + ++LLSQ + ++M KT       +R S +  V   S  QD W+GIPTRLNNIPHS
Sbjct: 269 VVFEETQTLLSQIQLKRMIKTG-----KKRDSGTPLVYKASPVQDKWRGIPTRLNNIPHS 323

Query: 58  REIRNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFAD 117
           R+IR YFY+DVLQAT R++ DG TRL+V+INIPELNPEMDVYRIGTLMELVRV+ALSFAD
Sbjct: 324 RDIRAYFYEDVLQATIRSIKDGNTRLRVDINIPELNPEMDVYRIGTLMELVRVLALSFAD 383

Query: 118 DGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQ 177
           DGKRVKVCVQGSMGEGALAGMPLQLAGTRKILE+MDWGD    GTFV++G+IG  EVDE+
Sbjct: 384 DGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEYMDWGDDETLGTFVKLGAIGGKEVDEE 443

Query: 178 DDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLE 237
           DDMFILVAPQNAVGNCIIDD++AMT AAG RPV+LINPRLKDLP SSGIMQTMGR++RLE
Sbjct: 444 DDMFILVAPQNAVGNCIIDDLQAMTTAAGKRPVVLINPRLKDLPASSGIMQTMGREQRLE 503

Query: 238 YAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKP 297
           YA +F+NCY FRLLYY GTQYPIMGALRM+YP  YELYKRV+  +G EKYV+L+T++E+P
Sbjct: 504 YALTFDNCYVFRLLYYLGTQYPIMGALRMSYPYRYELYKRVNEENGKEKYVLLATYSERP 563

Query: 298 SSDDINDAFLGKPRNREKKASGFWGFLSSVF 328
           + + I+DAF GK R++ KK SG WGFLSSVF
Sbjct: 564 TPEQIDDAFSGKSRDQSKKPSGIWGFLSSVF 594

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	328
TAIR|locus:2182407	588	AT5G35170 [Arabidopsis thalian	0.960	0.535	0.719	2.6e-125

TAIR|locus:2182407 AT5G35170 [Arabidopsis thaliana (taxid:3702)]

 Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
 Identities = 236/328 (71%), Positives = 276/328 (84%)

Query:     1 MVFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREI 60
             +VF + ++LLSQ + ++M KT    PV             QD W+GIPTRLNNIPHSR+I
Sbjct:   273 VVFEETQTLLSQIQLKRMIKTDKASPV-------------QDKWRGIPTRLNNIPHSRDI 319

Query:    61 RNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGK 120
             R YFY+DVLQAT R++ DG TRL+V+INIPELNPEMDVYRIGTLMELV+ +ALSFADDGK
Sbjct:   320 RAYFYEDVLQATIRSIKDGNTRLRVDINIPELNPEMDVYRIGTLMELVQALALSFADDGK 379

Query:   121 RVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDM 180
             RVKVCVQGSMGEGALAGMPLQLAGTRKILE+MDWGD    GTFV++G+IG  EVDE+DDM
Sbjct:   380 RVKVCVQGSMGEGALAGMPLQLAGTRKILEYMDWGDDETLGTFVKLGAIGGKEVDEEDDM 439

Query:   181 FILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAA 240
             FILVAPQNAVGNCIIDD++AMT AAG RPV+LINPRLKDLP SSGIMQTMGR++RLEYA 
Sbjct:   440 FILVAPQNAVGNCIIDDLQAMTTAAGKRPVVLINPRLKDLPASSGIMQTMGREQRLEYAL 499

Query:   241 SFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSD 300
             +F+NCY FRLLYY GTQYPIMGALRM+YP  YELYKRV+  +G EKYV+L+T+ E+P+ +
Sbjct:   500 TFDNCYVFRLLYYLGTQYPIMGALRMSYPYRYELYKRVNEENGKEKYVLLATYAERPTPE 559

Query:   301 DINDAFLGKPRNREKKASGFWGFLSSVF 328
              I+DAF GK R++ KKASG WGFLSSVF
Sbjct:   560 QIDDAFSGKSRDQSKKASGIWGFLSSVF 587


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      328       328   0.00088  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  210 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.80u 0.17s 25.97t   Elapsed:  00:00:01
  Total cpu time:  25.80u 0.17s 25.97t   Elapsed:  00:00:01
  Start:  Sat May 11 12:57:15 2013   End:  Sat May 11 12:57:16 2013

GO:0004017 "adenylate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006139 "nucleobase-containing compound metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016776 "phosphotransferase activity, phosphate group as acceptor" evidence=IEA

GO:0019201 "nucleotide kinase activity" evidence=IEA;ISS

GO:0019205 "nucleobase-containing compound kinase activity" evidence=IEA

GO:0046939 "nucleotide phosphorylation" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XVIII.3392.1	nucleotide kinase (EC-2.7.4.3) (500 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_1270057	adenine phosphoribosyltransferase (EC-2.4.2.7) (183 aa)						•	•		0.902
	estExt_fgenesh4_pg.C_LG_VI1808	adenine phosphoribosyltransferase (EC-2.4.2.7) (192 aa)						•	•		0.902
	grail3.0007027201	adenine phosphoribosyltransferase (EC-2.4.2.7) (192 aa)						•	•		0.902
	estExt_fgenesh4_pg.C_LG_XIV0085	adenine phosphoribosyltransferase (EC-2.4.2.7) (256 aa)						•	•		0.900
	gw1.XIII.2192.1	polyribonucleotide nucleotidyltransferase (EC-2.7.7.8) (853 aa)						•			0.899
	gw1.XII.1350.1	hypothetical protein (612 aa)						•			0.899
	gw1.X.1884.1	adenylosuccinate lyase (EC-4.3.2.2) (472 aa)						•			0.899
	gw1.VIII.327.1	ribonucleoside-diphosphate reductase (EC-1.17.4.1) (342 aa)						•			0.899
	gw1.IX.2629.1	pyruvate kinase (EC-2.7.1.40) (481 aa)						•			0.899
	gw1.II.1445.1	SubName- Full=Putative uncharacterized protein; (164 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	328
PLN02842	505	PLN02842, PLN02842, nucleotide kinase	0.0
pfam09353	205	pfam09353, DUF1995, Domain of unknown function (DU	7e-50

>gnl|CDD|178435 PLN02842, PLN02842, nucleotide kinase

 Score =  614 bits (1586), Expect = 0.0
 Identities = 257/325 (79%), Positives = 286/325 (88%), Gaps = 11/325 (3%)

Query: 2   VFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIR 61
           VF +I SLLSQ +++             +  ++ + S  QD W+GIPTRLNNIPHSREIR
Sbjct: 192 VFEEISSLLSQIQKDA-----------TKMIKTKKASPVQDKWRGIPTRLNNIPHSREIR 240

Query: 62  NYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKR 121
            YFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRV+ALSFADDGKR
Sbjct: 241 AYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVLALSFADDGKR 300

Query: 122 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMF 181
           VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFV+IG+IGA EVDE+DDMF
Sbjct: 301 VKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVKIGAIGAKEVDEEDDMF 360

Query: 182 ILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAAS 241
           ILVAPQNAVGNCIIDD++AMT AAG RPVIL+NPRLKDLPGSSGIMQTMGR++RLEYAAS
Sbjct: 361 ILVAPQNAVGNCIIDDLQAMTTAAGKRPVILVNPRLKDLPGSSGIMQTMGREQRLEYAAS 420

Query: 242 FENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDD 301
           FENCY FRLLYYAGTQYPIMGALRM+YP  YELYKRVD  +G EKY+IL+TF+E+P+ D+
Sbjct: 421 FENCYSFRLLYYAGTQYPIMGALRMSYPYRYELYKRVDEENGKEKYIILATFSERPTPDE 480

Query: 302 INDAFLGKPRNREKKASGFWGFLSS 326
           INDAF G+ R++ KKASG WGFLS 
Sbjct: 481 INDAFSGRSRDQAKKASGIWGFLSI 505

Length = 505

>gnl|CDD|220198 pfam09353, DUF1995, Domain of unknown function (DUF1995)

 Score =  164 bits (418), Expect = 7e-50
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 44/241 (18%)

Query: 65  YDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKV 124
            +   +A   A+ DG+TRL+VE+  P L           LM L   +A + A++G+R+  
Sbjct: 9   EEQAKEALLAALKDGKTRLQVELRFPGL----------KLMPLALRLARALAEEGRRLL- 57

Query: 125 CVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVEIGSIGANEVDEQDDMFILV 184
            V    G  ALA          KIL   D                 + +  + DD+ ILV
Sbjct: 58  VVFPDAGAAALARRDW-GDLAFKILSLSDR--------------KLSEDESKIDDILILV 102

Query: 185 APQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAASFEN 244
           APQ +     +++++A+ + AG RPVI++NPRL+D   + GI  ++ R++R  + +++E 
Sbjct: 103 APQPSD----LEEVEALCELAGGRPVIMLNPRLED-AAAVGI-GSVARERRRRFLSTWEV 156

Query: 245 CYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDIND 304
            Y+ R L          GAL   YP  ++L+K  +       Y +++ F  +P  ++I+ 
Sbjct: 157 AYYLRPLE-------RGGALFRCYPGPWQLFKEDN-----GGYRLVAEFESRPDPEEIDA 204

Query: 305 A 305
            
Sbjct: 205 L 205

This family of proteins are functionally uncharacterized. Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	328
PLN02842	505	nucleotide kinase	100.0
PF09353	209	DUF1995: Domain of unknown function (DUF1995); Int	100.0

>PLN02842 nucleotide kinase

Probab=100.00  E-value=5.7e-97  Score=747.33  Aligned_cols=314  Identities=82%  Similarity=1.321  Sum_probs=298.8

Q ss_pred             chhhHHHHHHHHHHHhhhhhccccCCCcccccccccccccCCCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCc
Q 020309            2 VFADIESLLSQAKREKMKKTTAVKPVHERKSRSNQVSSSQDNWKGIPTRLNNIPHSREIRNYFYDDVLQATQRAVNDGRT   81 (328)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ln~vP~~re~~~~f~~qA~~A~~~Al~dG~~   81 (328)
                      ||++|.++|+++..++..  .         .++..++++|++|+||||+||||||+||+|+|||+||++||++|++||++
T Consensus       192 VfeeI~~iL~~~L~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~g~~  260 (505)
T PLN02842        192 VFEEISSLLSQIQKDATK--M---------IKTKKASPVQDKWRGIPTRLNNIPHSREIRAYFYDDVLQATQRAVNDGRT  260 (505)
T ss_pred             HHHHHHHHHHHHHhhhhh--h---------cccccccchhhhhccCchhhcCCCChHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            788999999887766631  1         11235678999999999999999999999999999999999999999999


Q ss_pred             eeEEEEEcCCCCCCcchhhhhhhHHHHHHHHHHHhcCCCeeEEEeeCCcchhhhcCCCccchhhhhhhhhcccCCCCCCc
Q 020309           82 RLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKG  161 (328)
Q Consensus        82 Rl~VEl~fPeL~~e~D~yri~t~~~lar~~~~~l~~~g~rvkI~fPD~aG~aala~~~~~l~g~~~il~~~dw~~~~~~~  161 (328)
                      |++||+.||||+++||+|||||+|+|||+|+.+|+++|+|||||||||||+|||+|+|++|+|+++|+++|||+++++++
T Consensus       261 r~~~~~~~pel~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~kv~~~~~~g~~~~~~~~~~~~~~~~~~~~~dw~~~~~~~  340 (505)
T PLN02842        261 RLKVEINIPELNPEMDVYRIGTLMELVRVLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKG  340 (505)
T ss_pred             eEEEEEecCccccccccccchhHHHHHHHHHHHHhhcCCceEEEecCCcchhHhccCccccccchhhhhhcccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeeccCCCCCCCCCCCEEEEEeccCCCccccHHHHHHHHHHcCCCcEEEEcCCcCCCCCCcCccCchhhHHHHHhhhc
Q 020309          162 TFVEIGSIGANEVDEQDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKDLPGSSGIMQTMGRDKRLEYAAS  241 (328)
Q Consensus       162 ~f~~~~~~~~~~v~~~dd~~Ivv~P~~~v~~~el~~ve~l~~~a~drPvVllNp~Led~~s~~Gig~~~~R~lr~~Fl~s  241 (328)
                      +|+++|++|+++++++|++||+|+||+.||+|++++||+||++++||||||+||+|+|+.|++|||++++|++|++|+++
T Consensus       341 ~~~~~~~~~~~~~~~~d~~~i~v~P~~~v~~~~~~~~e~~~~~~~~rpvillnp~LeD~~~~vGig~~~~R~~R~~f~~t  420 (505)
T PLN02842        341 TFVKIGAIGAKEVDEEDDMFILVAPQNAVGNCIIDDLQAMTTAAGKRPVILVNPRLKDLPGSSGIMQTMGREQRLEYAAS  420 (505)
T ss_pred             cceeecccccCCCCCCCcEEEEEcCCccccccchHHHHHHHHHhCCCeEEEECCcccccccccchhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CceeEEEEEecccCcccceeeEEEeecCCCceEEEEecCCCCCCceEEeeecCCCCCHHHHHHHHcCCCccccccCCcch
Q 020309          242 FENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSSDDINDAFLGKPRNREKKASGFW  321 (328)
Q Consensus       242 fe~vYylr~L~~~g~~~p~~GaLfR~YPgpWqV~~~~~~~~g~g~Y~~v~~~~~RPs~eel~~~l~~~~~~~~~~~~~~~  321 (328)
                      |++|||||||+++||+||++|||+|+||++||||++++...+.++|+++++|++||++|||+++|.++++++++|+||||
T Consensus       421 ~~~~Y~~~~l~~~~~~~~~~gal~~~yp~~w~l~~~~~~~~~~~~y~~~~~~~~~P~~e~i~~~~~~~~~~~~~~~~~~~  500 (505)
T PLN02842        421 FENCYSFRLLYYAGTQYPIMGALRMSYPYRYELYKRVDEENGKEKYIILATFSERPTPDEINDAFSGRSRDQAKKASGIW  500 (505)
T ss_pred             hhheeEEEeccccccccccceeeeecCCCCeeEEEecCccccCcceEEeeecCCCCCHHHHHHHhCCCccchhhccccch
Confidence            99999999999999999999999999999999999877544568999999999999999999999999999999999999


Q ss_pred             hcccc
Q 020309          322 GFLSS  326 (328)
Q Consensus       322 ~~~~~  326 (328)
                      |||||
T Consensus       501 ~~~~~  505 (505)
T PLN02842        501 GFLSI  505 (505)
T ss_pred             hcccC
Confidence            99986

>PF09353 DUF1995: Domain of unknown function (DUF1995); InterPro: IPR018962 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=8.6e-50  Score=363.60  Aligned_cols=197  Identities=36%  Similarity=0.646  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHHcCCceeEEEEEcCCCCCCcchhhhhhhHHHHHHHHHHHhcCCCeeEEEeeCCcchhhhcCCCccch
Q 020309           64 FYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGTLMELVRVIALSFADDGKRVKVCVQGSMGEGALAGMPLQLA  143 (328)
Q Consensus        64 f~~qA~~A~~~Al~dG~~Rl~VEl~fPeL~~e~D~yri~t~~~lar~~~~~l~~~g~rvkI~fPD~aG~aala~~~~~l~  143 (328)
                      .++||++|+++||++|.+|++||++||+|++        ++++++++|++.|++.|++++++||| +|++++        
T Consensus         8 a~~qA~~Av~~Al~~g~~r~~ve~~fP~l~~--------~~~~la~~~~~~l~~~~~~~~~~~pd-~g~~al--------   70 (209)
T PF09353_consen    8 AVEQAAEAVQAALEDGDSRQLVELEFPGLNP--------SNMPLAREFARKLAASGRRVRVVFPD-AGEAAL--------   70 (209)
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEEEECCCcch--------hHHHHHHHHHHHHHhcCceEEEEcCC-hHHHHH--------
Confidence            7999999999999999999999999999943        38999999999999999999999998 999999        


Q ss_pred             hhhhhhhhcccCCCCCCcceeeeccCCCC-CCCC---CCCEEEEEeccCCCccccHHHHHHHHHHcCCCcEEEEcCCcCC
Q 020309          144 GTRKILEFMDWGDYGAKGTFVEIGSIGAN-EVDE---QDDMFILVAPQNAVGNCIIDDMKAMTDAAGTRPVILINPRLKD  219 (328)
Q Consensus       144 g~~~il~~~dw~~~~~~~~f~~~~~~~~~-~v~~---~dd~~Ivv~P~~~v~~~el~~ve~l~~~a~drPvVllNp~Led  219 (328)
                            +.++|++..++     +.++++. ....   .|+++|+|+|++.    +++++|+||+.+++||||||||+|+|
T Consensus        71 ------A~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~vvv~p~~~----~l~~~e~~~~~~~~rpvvl~Np~l~~  135 (209)
T PF09353_consen   71 ------ARRDWGDGSFK-----IASLDDWSSSEDESKFDDILVVVAPSPQ----ELDDVEKLCEAAGGRPVVLLNPQLED  135 (209)
T ss_pred             ------HhccccCCCeE-----EeeccCccccccccccCCEEEEEECChh----hHHHHHHHHHhcCCCeEEEEeccccc
Confidence                  55555443322     3333331 1111   1799999999999    99999999999989999999999999


Q ss_pred             CCCCcCccCchhhHHHHHhhhcCceeEEEEEecccCcccceeeEEEeecCCCceEEEEecCCCCCCceEEeeecCCCCCH
Q 020309          220 LPGSSGIMQTMGRDKRLEYAASFENCYFFRLLYYAGTQYPIMGALRMTYPNGYELYKRVDVPSGGEKYVILSTFTEKPSS  299 (328)
Q Consensus       220 ~~s~~Gig~~~~R~lr~~Fl~sfe~vYylr~L~~~g~~~p~~GaLfR~YPgpWqV~~~~~~~~g~g~Y~~v~~~~~RPs~  299 (328)
                      .++ +|+| +++|++|++|+++||+||||||++++|     .|+||||||||||||++++    +|+|+||+++++|||+
T Consensus       136 ~~~-~g~g-~~~r~~~~~Fl~~fe~vY~l~~l~~~~-----~gal~r~yP~~Wqv~~~~~----~~~y~~v~~~~~rP~~  204 (209)
T PF09353_consen  136 VRS-VGFG-FPGRKLRERFLSSFETVYYLRPLRISG-----NGALFRCYPGPWQVFREDD----DGEYECVAEFEERPTY  204 (209)
T ss_pred             CCc-cccc-cccHHHHHHHHhhceEEEEEEeeccCC-----cEEEEEeCCCCcEEEEEcC----CCcEEEEEecccCCCh
Confidence            884 5677 889999999999999999999998875     4999999999999999874    2899999999999999


Q ss_pred             HHHH
Q 020309          300 DDIN  303 (328)
Q Consensus       300 eel~  303 (328)
                      +||+
T Consensus       205 ~e~~  208 (209)
T PF09353_consen  205 EELE  208 (209)
T ss_pred             HHhh
Confidence            9997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	328
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 5e-06
 Identities = 46/382 (12%), Positives = 99/382 (25%), Gaps = 119/382 (31%)

Query: 3   FADIESLLSQA-KREKMKKTTAVKPVHER---------KSRSNQV-----SSSQDNWKGI 47
             D++ +      +E++      K                +   V        + N+K +
Sbjct: 35  CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL 94

Query: 48  PTRLNNIPHSREI--------RNYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVY 99
            + +        +        R+  Y+D     +  V+  +  LK+   + EL P  +  
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-- 152

Query: 100 RIGTLMELVRVIALSFADDGKRVKVCVQGSMGEG--ALAGMPLQLAGTRKILEFMD---- 153
                                   V + G +G G   +A        + K+   MD    
Sbjct: 153 ------------------------VLIDGVLGSGKTWVALDVCL---SYKVQCKMDFKIF 185

Query: 154 W---GDYGAKGTFVEI---------------------GSIGANEVDEQDDMFILVAPQNA 189
           W    +  +  T +E+                       +  + +  +    +   P   
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE- 244

Query: 190 VGNC--IIDD------MKA--------MTDAAGTRPV----ILINPRLKDLPGSSGIMQT 229
             NC  ++ +        A        +T    TR       L       +        T
Sbjct: 245 --NCLLVLLNVQNAKAWNAFNLSCKILLT----TRFKQVTDFLSAATTTHIS-LDHHSMT 297

Query: 230 MGRDKRLEYAASFENCYFFRLLYYAGTQYP----IMGALRMTYPNGYELYKRVDVPSGGE 285
           +  D+       + +C    L     T  P    I+          ++ +K V+     +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC----D 353

Query: 286 KYV-ILSTFTEKPSSDDINDAF 306
           K   I+ +        +    F
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMF 375

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00