Citrus Sinensis ID: 020366

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
Secondary Structure (PSIPRED)
cEEEEEccccccEEEEEcccEEEEEEEcccccccEEEcEEEEccccEEEEEEEccccccccEEEEEcccccccccEEEEEEEccccccccccccccccccccccHHHHHcccccccccccccccccccEEEEEEEEEEEEEcccccccccEEEEEEcccccccccccHHHHHHcccccccccccccccccccccccccEEEEEccccEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccEEEEccccEEEEEEEccccccEEEEEccHHHHHcccEEEEEEEccccccccccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccEEEEEEccEEEEEEEEEEEEccccEEEEEEcccccEEEEEEcccccccEEEEEEEcccccccEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEEEEEEcccccccccEEEEEEEcEEEcccccHHHHHHHccccccEccccccccccccccccccEEEEEEcccEEEEcccccccccEEEEEccccEEEEEEEEccccHHHHHHcccccccEEcEEEEcccEEEEEEEEccccEEEEEEEccHHHHHcccEEEEEEEccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mfrisnvglstsfnfRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTlnqppkdyyIVASTRFTKNVLTATAILHytnshspasgplptgptyeihwSMKQARTFRWNltanaarpnpqgsfhygkinttRTIVLansaplingklryavngisyvnsdtplkladyfnipgifsvnsiqsvpsggasSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGygsgqwaaeKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLaneydipsnilvcgkavghhp
Flexible Loop (DISEMBL)
mfrisnvglstsfnfriQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYtnshspasgpLPTGPTYEIHWSMKQARTFRWNLTANAarpnpqgsfhygkINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
Low Complexity Region (SEG)
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
Disordered region (IsUnstruct)
******VGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTN***********GPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAV****
Disordered Region (DISOPRED)
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH*****YDIPSNILVCGKA*****
Disordered Region (DISEMBL)
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS*********ATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
Disordered Region (DISPRO)
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKA*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
P29162	554	L-ascorbate oxidase homol	N/A	no	0.987	0.583	0.519	1e-100
Q00624	555	L-ascorbate oxidase homol	N/A	no	0.969	0.571	0.543	2e-99
Q9SU40	587	Monocopper oxidase-like p	no	no	0.972	0.541	0.483	2e-81
Q9FHN6	592	Monocopper oxidase-like p	no	no	0.972	0.537	0.460	4e-78
Q8VXX5	589	Monocopper oxidase-like p	no	no	0.966	0.536	0.467	1e-77
P24792	579	L-ascorbate oxidase OS=Cu	N/A	no	0.920	0.519	0.291	1e-32
P37064	552	L-ascorbate oxidase OS=Cu	N/A	no	0.920	0.545	0.291	6e-32
P14133	587	L-ascorbate oxidase OS=Cu	N/A	no	0.923	0.514	0.288	1e-30
Q40588	578	L-ascorbate oxidase OS=Ni	N/A	no	0.914	0.517	0.262	3e-22
Q0JHP8	554	Laccase-8 OS=Oryza sativa	no	no	0.911	0.537	0.273	7e-22

>sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/329 (51%), Positives = 230/329 (69%), Gaps = 6/329 (1%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           +R  N+G+ +S N R QGH MKLVE+EGSHT+QNIYDSLD+HVGQ +SVLVT +Q PKDY
Sbjct: 217 YRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDY 276

Query: 62  YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGP---TYEIHWSMKQARTFRWNLTAN 118
           Y+V S+RF K  L++ AI+ Y N   PAS  LPT P   T  I WSM Q R+FRWNLTA+
Sbjct: 277 YLVVSSRFLKQALSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTAS 336

Query: 119 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYF---N 175
           AARPNPQGS+HYG+IN TRTI + NS   + GKLRY +NGIS+ N +TPLKL +YF   N
Sbjct: 337 AARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATN 396

Query: 176 IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGY 235
               + + + ++       ++AT+V       ++E++F+N+EKT++++HLDGY F+ V  
Sbjct: 397 KAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAV 456

Query: 236 GSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQF 295
             G+W+ EKR+ YNL D L+R+  QVYP SW  I+++ DN GMWN+RS +WE+ YLG+Q 
Sbjct: 457 EPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQL 516

Query: 296 YLKVWNAVHSLANEYDIPSNILVCGKAVG 324
           Y  V +   SL +EY+IP N  +CG   G
Sbjct: 517 YFSVLSPSRSLRDEYNIPDNHPLCGIVKG 545

Probable oxidoreductase that may be involved in pollen tube growth.
Nicotiana tabacum (taxid: 4097)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: -

>sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1

 Score =  362 bits (930), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 175/322 (54%), Positives = 223/322 (69%), Gaps = 5/322 (1%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
           RI NVG+ TS NFRIQ H MKLVE+EGSH +QN YDSLDVHVGQ    +VT NQ PKDYY
Sbjct: 220 RICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYY 279

Query: 63  IVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARP 122
           +VAS+RF K V+T T +L Y     PAS  LP GP     WS+ Q R+FRWNLTA+AARP
Sbjct: 280 MVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPV-GWAWSLNQFRSFRWNLTASAARP 338

Query: 123 NPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPG-IFS 181
           NPQGS+HYGKIN TRTI L N+   ++GKLR+A+NG+S+   +TPLKLA+YF I   +F 
Sbjct: 339 NPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGISDKVFK 398

Query: 182 VNSIQSVPSGGASS---VATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG 238
            ++I   P+        +  +V+ +    ++EVVF+N+EK++QSWHLDGY F+ V    G
Sbjct: 399 YDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPG 458

Query: 239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298
            W  EKR+ YNL D ++RHT QVYP+ W  IL++ DN GMWN+RS   ER+YLGQQ Y  
Sbjct: 459 TWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYAS 518

Query: 299 VWNAVHSLANEYDIPSNILVCG 320
           V +   SL +EY++P   L CG
Sbjct: 519 VLSPEKSLRDEYNMPETSLQCG 540

Probable oxidase that may be involved in pollen tube growth.

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: -

>sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/327 (48%), Positives = 206/327 (62%), Gaps = 9/327 (2%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ-PPKD 60
            R+SNVG+STS NFRIQGH + L E EGS+T+Q  Y SLD+HVGQS S LVT++Q    D
Sbjct: 223 LRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSD 282

Query: 61  YYIVASTRFTKNVL----TATAILHYTNSHSPASGPLPTGPTYEIH--WSMKQARTFRWN 114
           YYIVAS R     +    T   IL YTNS   A G LP GP  E    +SM QAR+ RWN
Sbjct: 283 YYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWN 342

Query: 115 LTANAARPNPQGSFHYGKINTTRTIVLANSAPL-INGKLRYAVNGISYVNSDTPLKLADY 173
           ++A+ ARPNPQGSF YG IN T   VL N  P+ I+GK R  +NGIS+ N  TP++LAD 
Sbjct: 343 VSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADK 402

Query: 174 FNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 233
             +  ++ ++     P  G + VATS++      ++EVV QNN+  MQS+H+ GY F+VV
Sbjct: 403 LKVKDVYKLD-FPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVV 461

Query: 234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQ 293
           G   G+W    R TYN  D + R T QVYP +W+ IL+SLDN G WN+R+   +  YLGQ
Sbjct: 462 GMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQ 521

Query: 294 QFYLKVWNAVHSLANEYDIPSNILVCG 320
           + Y++V N   +   E+  P N+L CG
Sbjct: 522 ETYVRVVNPDENNKTEFGHPDNVLYCG 548

May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1

 Score =  291 bits (746), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 150/326 (46%), Positives = 207/326 (63%), Gaps = 8/326 (2%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ-PPKDY 61
           R+ NVG+STS NFRIQ H + L+E EG +T Q  +   DVHVGQS S LVT++Q    DY
Sbjct: 226 RVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDY 285

Query: 62  YIVASTRFTKNVL----TATAILHYTNSHSPASGPLPTGPTYEIH-WS-MKQARTFRWNL 115
           YIVAS RF    +    T   ILHY+NS  PASGPLP   T   H WS M Q R  + N 
Sbjct: 286 YIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNT 345

Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANSAPL-INGKLRYAVNGISYVNSDTPLKLADYF 174
           +A+ ARPNPQGSFHYG+IN TRT +L +  P  INGKLR  +NGIS+VN  TP++LAD  
Sbjct: 346 SASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDH 405

Query: 175 NIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVG 234
            + G + ++            +++S++      +I+V+FQNN+  +QS+H+DGY F+VV 
Sbjct: 406 KVKGDYMLDFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVA 465

Query: 235 YGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQ 294
              G W+ ++  +YN  D + R T +VYP +WT +L+SLDN G+WN+R    +R YLGQ+
Sbjct: 466 MDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQE 525

Query: 295 FYLKVWNAVHSLANEYDIPSNILVCG 320
            Y+++ N   + + E D P N++ CG
Sbjct: 526 TYMRIINPEENGSTEMDPPENVMYCG 551

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1

 Score =  290 bits (741), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 153/327 (46%), Positives = 208/327 (63%), Gaps = 11/327 (3%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KDY 61
           R+ NVG+STS NFRIQ H++ LVE EG +T Q  +   DVHVGQS S LVT++Q    DY
Sbjct: 227 RVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDY 286

Query: 62  YIVASTRFTKNVL----TATAILHYTNSHSPASGPLPTGPTYEIH--WS-MKQARTFRWN 114
           YIVAS RF    +    T  AILHY+NS  P SGPLP  P  ++   WS M Q +T R N
Sbjct: 287 YIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPV-PKTDVSSPWSAMSQPKTIRQN 345

Query: 115 LTANAARPNPQGSFHYGKINTTRTIVLANSAP-LINGKLRYAVNGISYVNSDTPLKLADY 173
            +A+ ARPNPQGSFHYG+IN T T +L +  P +ING LR  +NGIS+VN  TP++LAD 
Sbjct: 346 TSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADR 405

Query: 174 FNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 233
             + G + ++     P      +  S++      +I+VVFQNN+  +QS+H+DGY F+VV
Sbjct: 406 NKVKGAYKLD-FPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVV 464

Query: 234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQ 293
           G   G W+ +K+ +YN  D ++R T +VYP  WT +L+SLDN G+WN+R    +R YLG+
Sbjct: 465 GMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGE 524

Query: 294 QFYLKVWNAVHSLANEYDIPSNILVCG 320
           + Y+++ N       E D P N+L CG
Sbjct: 525 ETYMRITNPEEDGKTEMDPPDNVLYCG 551

Arabidopsis thaliana (taxid: 3702)

>sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2

 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 39/340 (11%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKD 60
           RI++     + NF I  H + +VE +G++ +Q  Y S +D++ G+S SVL+T +Q P ++
Sbjct: 247 RIASTTALAALNFAIGNHPLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSEN 305

Query: 61  YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y++   TR     T   LT    L  + S  P S P P  P ++      +++ F + +T
Sbjct: 306 YWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPP-PETPAWD---DFDRSKNFTYRIT 361

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
           A    P P        + + R I L N+  +ING +++A+N +S     TP   A  FN+
Sbjct: 362 AAMGSPKP-------PVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNL 414

Query: 177 ---------PGIFSVN-SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
                    P +F  +  I + P+   + +   V Q  + E ++V+ QN      N   +
Sbjct: 415 LHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEI 474

Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             WHL G+DFWV+GYG G++ AE+  + NL +   R+T  ++P  WT I    DN G+W 
Sbjct: 475 HPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 534

Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
               I    ++G          V  +     IP+  L CG
Sbjct: 535 FHCHIEPHLHMGMGVVFA--EGVEKVGR---IPTKALACG 569

May be involved in a redox system involving ascorbic acid.

Cucurbita maxima (taxid: 3661)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: 3

>sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1

 Score =  138 bits (347), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 39/340 (11%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKD 60
           RI++     + NF I  H + +VE +G++ +Q  Y S +D++ G+S SVL+T +Q P ++
Sbjct: 217 RIASTTALAALNFAIGNHQLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSEN 275

Query: 61  YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y++   TR     T   LT    L  + S  P S P P  P ++      +++ F + +T
Sbjct: 276 YWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRIT 331

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
           A    P P   F+       R I L N+  +ING +++A+N +S     TP   A  +N+
Sbjct: 332 AAMGSPKPPVKFN-------RRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL 384

Query: 177 ---------PGIFSVN-SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
                    P +F  +  I + P+   + +   V Q  + E ++V+ QN      N    
Sbjct: 385 LHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSET 444

Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             WHL G+DFWV+GYG G+++AE+  + NL +   R+T  ++P  WT I    DN G+W 
Sbjct: 445 HPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 504

Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
               I    ++G          V  +     IP+  L CG
Sbjct: 505 FHCHIEPHLHMGMGVVFA--EGVEKVGR---IPTKALACG 539

May be involved in a redox system involving ascorbic acid.

Cucurbita pepo var. melopepo (taxid: 3665)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: 3

>sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 154/340 (45%), Gaps = 38/340 (11%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
           RI++     S NF I  H + +VE +G++    +   +D++ G+S SVL+T +Q P + Y
Sbjct: 252 RIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENY 311

Query: 63  IVA---STRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEI-HWS-MKQARTFRWNLTA 117
            V+     R  K     T + +  NS S     LP  P  E  HW    +++ F + + A
Sbjct: 312 WVSIGVRARLPKTPPGLTLLNYLPNSAS----KLPISPPPETPHWEDFDRSKNFTFRIFA 367

Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTP------LKLA 171
               P P        +   R + L N+   ING +++A+N +S     TP      ++L 
Sbjct: 368 AMGSPKP-------PVRYNRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLN 420

Query: 172 DYFN---IPGIFSVN-SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTMQ 221
             FN    P  F +N  I + P    ++    V + N+ E ++V+ QN      N   + 
Sbjct: 421 TAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIH 480

Query: 222 SWHLDGYDFWVVGYGSGQ-WAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
            WHL G+DFWV+GYG G+ +A E  +  NL +   R+T  ++P  WT I    DN G+W 
Sbjct: 481 PWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 540

Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
               I    ++G          VH +     IP   L CG
Sbjct: 541 FHCHIEPHLHMGMGVVFA--EGVHMVGM---IPPKALACG 575

May be involved in a redox system involving ascorbic acid.

Cucumis sativus (taxid: 3659)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: 3

>sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1

 Score =  106 bits (264), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 44/343 (12%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KD 60
            R+++     S +  I GH M +VE +G++        +D++ G+S SVL   +Q P K+
Sbjct: 244 LRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKN 303

Query: 61  YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y+I  + R     T   LT    L  + S  P   P P  P +        +++F   + 
Sbjct: 304 YWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPP-PIAPLWN---DYNHSKSFSNKIF 359

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYF-- 174
           A    P P    H       R I+L N+   I+G  ++A+N +S V   T L L      
Sbjct: 360 ALMGSPKPPPQNH-------RRIILLNTQNKIDGYTKWAINNVSLV-LPTQLYLGSIRYG 411

Query: 175 -----------NIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NE 217
                      N P  + V  ++  P+   S+    V  +  +  I+++ QN      + 
Sbjct: 412 INAFDTKPPPDNFPKDYDV--LKQAPNSN-STYGNGVYMLKFNTTIDIILQNANALAKDV 468

Query: 218 KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG 277
             +  WHL G+DFWV+GYG G+++ +  + +NL +   R+TA ++P  WT +    DN G
Sbjct: 469 SEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPG 528

Query: 278 MWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
           +W     I    ++G          VH +     IP   L CG
Sbjct: 529 VWAFHCHIEPHLHMGMGVIFA--EGVHLVKK---IPKEALACG 566

May be involved in a redox system involving ascorbic acid.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: 3

>sp|Q0JHP8|LAC8_ORYSJ Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=2 SV=2

 Score =  104 bits (260), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 136/322 (42%), Gaps = 24/322 (7%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           + RI N  ++    F++ GHT  +V  + S+T     D + +  GQ+V  L+     P  
Sbjct: 219 LLRIINAAVNVELFFKVAGHTFTVVAADASYTKPYATDVIVIAPGQTVDALMNTTASPGR 278

Query: 61  YYIVASTRFTKNVL------TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWN 114
           YY+ A    +K V       TAT I+ Y    + A   +P+ P    H  +  A  F W+
Sbjct: 279 YYMAAHVFDSKTVAVPFDQSTATGIVKYKGVPNYAPAAMPSLPP---HDDVVTAGRFYWS 335

Query: 115 LTANAARPNPQGSFHYGKINTTRTIVL--ANSAPLINGKLRYAV------NGISYVNSDT 166
           LT   ARP+  G       N   T  L  A  AP       +A+      N   + +   
Sbjct: 336 LTG-LARPSDPGVPTTVDHNMVVTFGLDQAPCAPNQTKCSGFALVAAMNRNSFQFPDQKV 394

Query: 167 PLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTM------ 220
            L  A Y  +PG++S +     P       AT+V +V  ++ +EVV Q+ + +       
Sbjct: 395 SLLEALYKGVPGVYSEDFPDFPPPMQGFRKATAVKKVKYNDVVEVVLQSEQYSSTLGTEN 454

Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
              HL G+DF+++  G G++    +  YNL D   R+T  V    W VI    +N GMW 
Sbjct: 455 HPIHLHGFDFYLLAQGLGRFNPSMKSKYNLVDPQVRNTVAVPAGGWAVIRFMANNPGMWF 514

Query: 281 MRSAIWERQYLGQQFYLKVWNA 302
           M   +     LG     +V N 
Sbjct: 515 MHCHLDAHLPLGLAMVFEVLNG 536

Lignin degradation and detoxification of lignin-derived products.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 0

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
147795424	592	hypothetical protein VITISV_028749 [Viti	1.0	0.552	0.804	1e-160
225468506	536	PREDICTED: L-ascorbate oxidase homolog [	1.0	0.610	0.804	1e-160
297735840	535	unnamed protein product [Vitis vinifera]	1.0	0.611	0.804	1e-160
255562663	539	multicopper oxidase, putative [Ricinus c	0.996	0.604	0.819	1e-160
444436455	517	SKU5-like protein, partial [Eucalyptus c	0.990	0.626	0.805	1e-157
449448348	537	PREDICTED: L-ascorbate oxidase homolog [	0.996	0.607	0.794	1e-156
356496848	540	PREDICTED: L-ascorbate oxidase homolog [	1.0	0.605	0.790	1e-155
224094448	538	multicopper oxidase [Populus trichocarpa	0.996	0.605	0.779	1e-155
356563668	541	PREDICTED: L-ascorbate oxidase homolog [	0.996	0.602	0.785	1e-154
356537710	537	PREDICTED: L-ascorbate oxidase homolog [	1.0	0.608	0.784	1e-154

>gi|147795424|emb|CAN72538.1| hypothetical protein VITISV_028749 [Vitis vinifera]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/327 (80%), Positives = 296/327 (90%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGHTMKLVEVEGSHT+QN YDSLDVHVGQS++VLVTL+Q PKD
Sbjct: 266 MFRISNVGLSTSINFRIQGHTMKLVEVEGSHTLQNTYDSLDVHVGQSIAVLVTLDQLPKD 325

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFTK +LTATA+LHYTNSH+P SGP+P GPTY+IHWSMKQART+RWNLTA+AA
Sbjct: 326 YYIVASTRFTKQILTATAVLHYTNSHTPVSGPVPAGPTYQIHWSMKQARTYRWNLTASAA 385

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  +RTI+L NSAP +NGK RYAVNG+SY+N DTPLKLADYFNIPG+F
Sbjct: 386 RPNPQGSFHYGKITPSRTIMLXNSAPRLNGKQRYAVNGVSYINXDTPLKLADYFNIPGVF 445

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SVNSIQ +PSGG+S ++TSVM  N H++IEVVFQNNE T+QSWHLDGYDFWVVGYG GQW
Sbjct: 446 SVNSIQDLPSGGSSFLSTSVMAANHHDFIEVVFQNNENTIQSWHLDGYDFWVVGYGFGQW 505

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
              +R++YNL D LTRHTAQVYP+SWT I VSLDNQGMWNMRSA+WERQYLGQQFYL+V+
Sbjct: 506 TPARRKSYNLIDALTRHTAQVYPRSWTTIWVSLDNQGMWNMRSAVWERQYLGQQFYLRVF 565

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHHP 327
           N VHS ANEYDIP N L+CGKA+G HP
Sbjct: 566 NPVHSPANEYDIPKNALLCGKAIGRHP 592

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225468506|ref|XP_002270831.1| PREDICTED: L-ascorbate oxidase homolog [Vitis vinifera]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/327 (80%), Positives = 297/327 (90%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGHTMKLVEVEGSHT+QN YDSLDVHVGQS++VLVTL+Q PKD
Sbjct: 210 MFRISNVGLSTSINFRIQGHTMKLVEVEGSHTLQNTYDSLDVHVGQSIAVLVTLDQLPKD 269

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFTK +LTATA+LHYTNSH+P SGP+P GPTY+IHWSMKQART+RWNLTA+AA
Sbjct: 270 YYIVASTRFTKQILTATAVLHYTNSHTPVSGPVPAGPTYQIHWSMKQARTYRWNLTASAA 329

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  +RTI+L NSAP +NGK RYAVNG+SY+N+DTPLKLADYFNIPG+F
Sbjct: 330 RPNPQGSFHYGKITPSRTIMLVNSAPRLNGKQRYAVNGVSYINADTPLKLADYFNIPGVF 389

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SVNSIQ +PSGG+S ++TSVM  N H++IEVVFQNNE T+QSWHLDGYDFWVVGYG GQW
Sbjct: 390 SVNSIQDLPSGGSSFLSTSVMAANHHDFIEVVFQNNENTIQSWHLDGYDFWVVGYGFGQW 449

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
              +R++YNL D LTRHTAQVYP+SWT I VSLDNQGMWNMRSA+WERQYLGQQFYL+V+
Sbjct: 450 TPARRKSYNLIDALTRHTAQVYPRSWTTIWVSLDNQGMWNMRSAVWERQYLGQQFYLRVF 509

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHHP 327
           N VHS ANEYDIP N L+CGKA+G HP
Sbjct: 510 NPVHSPANEYDIPKNALLCGKAIGRHP 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735840|emb|CBI18560.3| unnamed protein product [Vitis vinifera]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/327 (80%), Positives = 297/327 (90%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGHTMKLVEVEGSHT+QN YDSLDVHVGQS++VLVTL+Q PKD
Sbjct: 209 MFRISNVGLSTSINFRIQGHTMKLVEVEGSHTLQNTYDSLDVHVGQSIAVLVTLDQLPKD 268

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFTK +LTATA+LHYTNSH+P SGP+P GPTY+IHWSMKQART+RWNLTA+AA
Sbjct: 269 YYIVASTRFTKQILTATAVLHYTNSHTPVSGPVPAGPTYQIHWSMKQARTYRWNLTASAA 328

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  +RTI+L NSAP +NGK RYAVNG+SY+N+DTPLKLADYFNIPG+F
Sbjct: 329 RPNPQGSFHYGKITPSRTIMLVNSAPRLNGKQRYAVNGVSYINADTPLKLADYFNIPGVF 388

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SVNSIQ +PSGG+S ++TSVM  N H++IEVVFQNNE T+QSWHLDGYDFWVVGYG GQW
Sbjct: 389 SVNSIQDLPSGGSSFLSTSVMAANHHDFIEVVFQNNENTIQSWHLDGYDFWVVGYGFGQW 448

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
              +R++YNL D LTRHTAQVYP+SWT I VSLDNQGMWNMRSA+WERQYLGQQFYL+V+
Sbjct: 449 TPARRKSYNLIDALTRHTAQVYPRSWTTIWVSLDNQGMWNMRSAVWERQYLGQQFYLRVF 508

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHHP 327
           N VHS ANEYDIP N L+CGKA+G HP
Sbjct: 509 NPVHSPANEYDIPKNALLCGKAIGRHP 535

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562663|ref|XP_002522337.1| multicopper oxidase, putative [Ricinus communis] gi|223538415|gb|EEF40021.1| multicopper oxidase, putative [Ricinus communis]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/326 (81%), Positives = 295/326 (90%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           M RISNVGLSTS NFRIQGH MKLVEVEGSHTIQNIYDSLDVHVGQSV+VLVTL+QPPKD
Sbjct: 213 MLRISNVGLSTSLNFRIQGHKMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLDQPPKD 272

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFT+ VLTATA+LHY+NS +PASGPLP  P+   HWSM+QART+RWNLTA+AA
Sbjct: 273 YYIVASTRFTRQVLTATAVLHYSNSQTPASGPLPAPPSGLFHWSMQQARTYRWNLTASAA 332

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  T+TIVLANSAPLINGK RYAVN +SYVN+DTPLKLADYFNIPG+F
Sbjct: 333 RPNPQGSFHYGKIIPTKTIVLANSAPLINGKRRYAVNRVSYVNADTPLKLADYFNIPGVF 392

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SV+SIQS+PS G + VATSV+  +LH+++EVVFQNNE TMQSWHLDGYDFWVVGYG+GQW
Sbjct: 393 SVDSIQSLPSDGPAYVATSVLPTSLHDFVEVVFQNNEYTMQSWHLDGYDFWVVGYGAGQW 452

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
           A  KRRTYNL D LTRHTAQVYP++WT ILVSLDNQGMWNMRSAIWERQYLGQQ YL+VW
Sbjct: 453 APNKRRTYNLVDALTRHTAQVYPKAWTAILVSLDNQGMWNMRSAIWERQYLGQQLYLRVW 512

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHH 326
             VHSLANEYDIP N L+CGKA+G H
Sbjct: 513 TQVHSLANEYDIPCNALLCGKAIGRH 538

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444436455|gb|AGE09595.1| SKU5-like protein, partial [Eucalyptus cladocalyx]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/324 (80%), Positives = 292/324 (90%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVG+STS NFRIQGHT+KLVEVEGSHT+QN+YDS+DVHVGQS++VLVTLNQPPKD
Sbjct: 194 MFRISNVGMSTSLNFRIQGHTLKLVEVEGSHTVQNMYDSIDVHVGQSLAVLVTLNQPPKD 253

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFTK VL ATA+LHYTNS +P SGPLP GPTY+ HWSMKQART RWNLTA+AA
Sbjct: 254 YYIVASTRFTKTVLNATAVLHYTNSLTPVSGPLPAGPTYQKHWSMKQARTIRWNLTASAA 313

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  +RTIVLANSAPLINGK RYAVNG+SY+N+DTPLKLADYFNI G+F
Sbjct: 314 RPNPQGSFHYGKIAISRTIVLANSAPLINGKRRYAVNGVSYINADTPLKLADYFNIAGVF 373

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           S NS+QSVPSGG++S+ATSVM  +LHE+IE+VFQN+E T+QSWHLDGYDFWVVGYG GQW
Sbjct: 374 STNSLQSVPSGGSASLATSVMPASLHEFIEIVFQNSENTVQSWHLDGYDFWVVGYGFGQW 433

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
               R+ YNL D  TRHTAQVYP++WT ILVSLDNQGMWN+RSA WERQYLGQQFYL+VW
Sbjct: 434 TPASRKIYNLVDAPTRHTAQVYPRAWTSILVSLDNQGMWNLRSAAWERQYLGQQFYLRVW 493

Query: 301 NAVHSLANEYDIPSNILVCGKAVG 324
              HSLANEY IPSN L+CGKAVG
Sbjct: 494 TPDHSLANEYGIPSNALLCGKAVG 517

Source: Eucalyptus cladocalyx

Species: Eucalyptus cladocalyx

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448348|ref|XP_004141928.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] gi|449485452|ref|XP_004157172.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus]

 Score =  555 bits (1431), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 259/326 (79%), Positives = 292/326 (89%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGH MKLVEVEGSHT+QN+YDSLDVHVGQS+SVLVTL+Q PKD
Sbjct: 212 MFRISNVGLSTSLNFRIQGHKMKLVEVEGSHTLQNLYDSLDVHVGQSLSVLVTLDQAPKD 271

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFTK VLTATA+LHY+NS+SP SGPLP GPT E+ WS+KQARTFRWNLTANAA
Sbjct: 272 YYIVASTRFTKTVLTATAVLHYSNSNSPVSGPLPAGPTIEVDWSVKQARTFRWNLTANAA 331

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  T+TIVLA SA LINGK RYA+N +SYVNSDTPLKLADYFNIPG+F
Sbjct: 332 RPNPQGSFHYGKIIPTKTIVLATSAALINGKQRYAINRVSYVNSDTPLKLADYFNIPGVF 391

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SV+S+QS+PS G + +ATSV+   LH+++E+VFQNNE T+QS+HLDGYDFWVVGYGSGQW
Sbjct: 392 SVDSLQSLPSDGPAFIATSVLPTALHDFVEIVFQNNENTVQSFHLDGYDFWVVGYGSGQW 451

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
           + + R +YNL D LTRHTAQVYP SWT ILVSLDNQGMWN+RS+IWERQYLGQQFYL+VW
Sbjct: 452 SQDSRNSYNLVDALTRHTAQVYPNSWTTILVSLDNQGMWNLRSSIWERQYLGQQFYLRVW 511

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHH 326
               SLANEY+IPSN L+CGKAVG H
Sbjct: 512 TQTQSLANEYNIPSNALLCGKAVGRH 537

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496848|ref|XP_003517277.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 260/329 (79%), Positives = 289/329 (87%), Gaps = 2/329 (0%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGHT+KLVEVEGSHT+QN+YDSLDVHVGQSV+VLVTLNQPPKD
Sbjct: 212 MFRISNVGLSTSINFRIQGHTLKLVEVEGSHTVQNLYDSLDVHVGQSVAVLVTLNQPPKD 271

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPT--YEIHWSMKQARTFRWNLTAN 118
           YYIVASTRFT+  LT TA+LHY NS S A GP+P  P   Y+  WSMKQART+RWNLTAN
Sbjct: 272 YYIVASTRFTETPLTTTAVLHYANSFSSALGPVPAPPVDKYDFDWSMKQARTYRWNLTAN 331

Query: 119 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPG 178
           AARPNPQGSFHYGKI  T+ I LANSAPLINGKLRYAVN +SYVN DTPLKLADYFNIPG
Sbjct: 332 AARPNPQGSFHYGKITPTKVIKLANSAPLINGKLRYAVNSVSYVNPDTPLKLADYFNIPG 391

Query: 179 IFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG 238
           +FSVN +Q+ PS G   + TSV+Q +LH++IEV+FQNNE TMQSWHLDGYDFWV+G+G G
Sbjct: 392 VFSVNLLQNSPSNGPGYIGTSVLQTSLHDFIEVIFQNNENTMQSWHLDGYDFWVIGHGFG 451

Query: 239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298
           QW    R+TYNL D LTRHTAQVYP+SWT ILVSLDNQGMWN+RSAIWERQYLGQQFYL+
Sbjct: 452 QWTDASRKTYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNLRSAIWERQYLGQQFYLR 511

Query: 299 VWNAVHSLANEYDIPSNILVCGKAVGHHP 327
           VWNA  SLANEYDIP+N+L+CGKAVGHHP
Sbjct: 512 VWNAQKSLANEYDIPNNVLLCGKAVGHHP 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094448|ref|XP_002310162.1| multicopper oxidase [Populus trichocarpa] gi|222853065|gb|EEE90612.1| multicopper oxidase [Populus trichocarpa]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 254/326 (77%), Positives = 290/326 (88%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISN+G+STS NFRIQGH+MKLVEVEGSHT+QNIYDSLDVHVGQSV+VLVTLNQ PKD
Sbjct: 212 MFRISNMGMSTSLNFRIQGHSMKLVEVEGSHTVQNIYDSLDVHVGQSVAVLVTLNQAPKD 271

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYI+ASTRF + +LT TA+LHY+NS +PASGPLP  P+Y  H SM QART++WNLTA+AA
Sbjct: 272 YYIIASTRFNRKILTTTAVLHYSNSRTPASGPLPAAPSYGYHGSMMQARTYKWNLTASAA 331

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGS+HYGKI  T+TI LANSAPLINGK RYAVN +SY+NSDTPLKLADYF IPG+F
Sbjct: 332 RPNPQGSYHYGKITPTKTIELANSAPLINGKQRYAVNRVSYINSDTPLKLADYFGIPGVF 391

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SV+SI+S PSGGA+ ++TSVM  NLH+++EVVFQN+EKTMQSWHLDGYDFWV+GYG+GQW
Sbjct: 392 SVDSIESSPSGGAAFLSTSVMSANLHDFLEVVFQNDEKTMQSWHLDGYDFWVIGYGNGQW 451

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
            + KR  YNL D LTRHT QVYP+SWT I VSLDNQGMWNMRSA+WERQYLGQQFYL+VW
Sbjct: 452 TSAKRSMYNLVDALTRHTVQVYPKSWTAIYVSLDNQGMWNMRSALWERQYLGQQFYLRVW 511

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHH 326
             VHSLANEYDIPSN L CGKA+G H
Sbjct: 512 TQVHSLANEYDIPSNALRCGKAIGIH 537

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563668|ref|XP_003550083.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 257/327 (78%), Positives = 293/327 (89%), Gaps = 1/327 (0%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVG+STS NFRIQGH +KLVE+EGSH +QN YD+LDVHVGQS +VLVTLNQPPKD
Sbjct: 213 MFRISNVGMSTSINFRIQGHPLKLVEIEGSHIVQNTYDTLDVHVGQSAAVLVTLNQPPKD 272

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRF++ VLTATA+LHY+NS+SPASGPLP+ P Y+ HWS+KQART+RWNLTANAA
Sbjct: 273 YYIVASTRFSRKVLTATAVLHYSNSNSPASGPLPSPPIYQYHWSVKQARTYRWNLTANAA 332

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGS+HYGKI  T+TIVL+NSAPLINGKLRYAVN +SYVNSDTPLKLADYFNIPGI+
Sbjct: 333 RPNPQGSYHYGKITPTKTIVLSNSAPLINGKLRYAVNKVSYVNSDTPLKLADYFNIPGIY 392

Query: 181 SVNSIQSVPSGGA-SSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQ 239
           SV+SIQ++PS    +S+ATSV+  +LH++IEVVFQNNE  MQSWHLDGYDFWVVGYG GQ
Sbjct: 393 SVDSIQTLPSESTPASIATSVVPTSLHDFIEVVFQNNENAMQSWHLDGYDFWVVGYGFGQ 452

Query: 240 WAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKV 299
           W   KRRTYNL D LTRHT QVYP +WT ILVSLDNQGMWN+RSAIWERQYLGQQ YL+V
Sbjct: 453 WTPAKRRTYNLVDALTRHTTQVYPNAWTTILVSLDNQGMWNLRSAIWERQYLGQQLYLRV 512

Query: 300 WNAVHSLANEYDIPSNILVCGKAVGHH 326
           W +  SLANEYDIP+N L+CGKAVGH+
Sbjct: 513 WTSERSLANEYDIPNNALLCGKAVGHN 539

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537710|ref|XP_003537368.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 258/329 (78%), Positives = 287/329 (87%), Gaps = 2/329 (0%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVG STS NFRIQGHT+KLVEVEGSHT+QN+YDSLDVHVGQSV+VLVTLNQPPKD
Sbjct: 209 MFRISNVGFSTSINFRIQGHTLKLVEVEGSHTVQNLYDSLDVHVGQSVAVLVTLNQPPKD 268

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPT--YEIHWSMKQARTFRWNLTAN 118
           YYIVASTRFT+  LT TA+LHY NS S A GP+P  P   Y+  WSMKQART+RWNLTAN
Sbjct: 269 YYIVASTRFTETPLTTTAVLHYANSFSSALGPVPAPPVDKYDFDWSMKQARTYRWNLTAN 328

Query: 119 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPG 178
           AARPNPQGSFHYGKI  T+ I LANSAPLINGKLRYAVN +SYVN DTPLKLADYFNIPG
Sbjct: 329 AARPNPQGSFHYGKITPTKVIKLANSAPLINGKLRYAVNSVSYVNPDTPLKLADYFNIPG 388

Query: 179 IFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG 238
           IFSVN +Q+ PS G   + TSV+Q +LH++IEV+FQNNE TMQSWHLDGYDFWV+G+G G
Sbjct: 389 IFSVNLLQNSPSNGPGYIGTSVLQTSLHDFIEVIFQNNENTMQSWHLDGYDFWVIGHGFG 448

Query: 239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298
           QW    R+TYNL D LTRHT QVYP+SWT ILVSLDNQGMWN+RSAIWERQYLGQQFYL+
Sbjct: 449 QWTDASRKTYNLVDALTRHTTQVYPKSWTTILVSLDNQGMWNLRSAIWERQYLGQQFYLR 508

Query: 299 VWNAVHSLANEYDIPSNILVCGKAVGHHP 327
           VW+A  SLANEYDIP+N+L+CGKAVGHHP
Sbjct: 509 VWDAQKSLANEYDIPNNVLLCGKAVGHHP 537

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2174954	546	sks17 "SKU5 similar 17" [Arabi	0.996	0.597	0.736	5.4e-134
TAIR|locus:2046763	541	sks16 "SKU5 similar 16" [Arabi	0.990	0.598	0.674	1.6e-118
TAIR|locus:2115154	541	sks15 "SKU5 similar 15" [Arabi	0.981	0.593	0.644	3.5e-114
TAIR|locus:2120648	541	sks4 "SKU5 similar 4" [Arabido	0.993	0.600	0.638	3.6e-112
TAIR|locus:2199798	541	sks5 "SKU5 similar 5" [Arabido	0.987	0.597	0.603	3.9e-108
TAIR|locus:2201133	538	sks7 "SKU5 similar 7" [Arabido	0.987	0.600	0.595	3.6e-105
TAIR|locus:2036911	551	sks8 "SKU5 similar 8" [Arabido	0.987	0.586	0.595	5.8e-105
TAIR|locus:2033513	542	SKS6 "SKU5-similar 6" [Arabido	0.990	0.597	0.577	1.6e-104
TAIR|locus:2121823	549	sks9 "SKU5 similar 9" [Arabido	0.993	0.591	0.557	1.7e-100
TAIR|locus:2132927	547	sks10 "SKU5 similar 10" [Arabi	0.975	0.583	0.537	2.3e-94

TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
 Identities = 240/326 (73%), Positives = 276/326 (84%)

Query:     1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             M RISNVGLS++FNFRIQGHTMK+VEVEGSH IQ  YDSLD+HVGQS++VLVTLNQ PKD
Sbjct:   220 MLRISNVGLSSTFNFRIQGHTMKVVEVEGSHVIQTDYDSLDIHVGQSLAVLVTLNQSPKD 279

Query:    61 YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
             YYIVASTRF ++ L+   +L Y+NS  PASG  P  P  E+ WSM+QARTFRWNLTANAA
Sbjct:   280 YYIVASTRFIRSKLSVMGLLRYSNSRVPASGDPPALPPGELVWSMRQARTFRWNLTANAA 339

Query:   121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
             RPNPQGSFHYG I+ T+T V +NSAPLINGK RYAVNG+SYV S+TPLKLAD+F I G+F
Sbjct:   340 RPNPQGSFHYGMISPTKTFVFSNSAPLINGKQRYAVNGVSYVKSETPLKLADHFGISGVF 399

Query:   181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
             S N+IQSVPS    +VATSV+Q + H+++E+VFQNNEK+MQSWHLDGYDFWVVG+GSGQW
Sbjct:   400 STNAIQSVPSNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVVGFGSGQW 459

Query:   241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
                KR  +NL D LTRHT QVYP+SWT ILVSLDNQGMWNMRSAIWERQY GQQFYLKVW
Sbjct:   460 TPAKRSLHNLVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVW 519

Query:   301 NAVHSLANEYDIPSNILVCGKAVGHH 326
             N+V SLANEY+ P N+ +CGKAVG H
Sbjct:   520 NSVQSLANEYNPPDNLQLCGKAVGRH 545

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2046763 sks16 "SKU5 similar 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
 Identities = 220/326 (67%), Positives = 252/326 (77%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FRISNVG+STS NFRIQGH M LVEVEGSHT+Q +Y+SLD+HVGQSV+VLVTL  P KDY
Sbjct:   215 FRISNVGISTSINFRIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDY 274

Query:    62 YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
             +IVASTRFTK +LT T IL Y  S    S PLP GPTY IHWSMKQART R NLTANAAR
Sbjct:   275 FIVASTRFTKPILTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARTIRLNLTANAAR 334

Query:   122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
             PNPQGSFHYG I   RT VLAN   +INGKLRY VN +SYVN  TPLKLAD+FNIPG+F+
Sbjct:   335 PNPQGSFHYGTIPINRTFVLANGRAMINGKLRYTVNRVSYVNPATPLKLADWFNIPGVFN 394

Query:   182 VNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWA 241
               +I ++P+ G S + TSV  V LHEY+E VFQNNE ++QSWHLDG   +VVGYGSG W 
Sbjct:   395 FKTIMNIPTPGPSILGTSVFDVALHEYVEFVFQNNEGSIQSWHLDGTSAYVVGYGSGTWN 454

Query:   242 AEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 301
               KRR YNL D ++RHT QVYP SWT ILVSLDN+GMWN+RS IW R+YLGQ+ Y++VWN
Sbjct:   455 MAKRRGYNLVDAVSRHTFQVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWN 514

Query:   302 AVHSLANEYDIPSNILVCGKAVGHHP 327
                SL  E + P N+L CGKA   HP
Sbjct:   515 NEKSLYTESEPPVNVLFCGKA--KHP 538

GO:0005507 "copper ion binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

TAIR|locus:2115154 sks15 "SKU5 similar 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
 Identities = 207/321 (64%), Positives = 249/321 (77%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FR+SNVG++TS NFRIQ HTM L+EVEG+HT+Q  Y+SLDVHVGQS++VLVTL    +DY
Sbjct:   217 FRVSNVGIATSINFRIQNHTMSLIEVEGAHTLQESYESLDVHVGQSMTVLVTLKASVRDY 276

Query:    62 YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
             +IVASTRFTK VLT TA L Y  S + A GPLP GPTY IHWSMKQART R NLTANAAR
Sbjct:   277 FIVASTRFTKPVLTTTASLRYQGSKNAAYGPLPIGPTYHIHWSMKQARTIRMNLTANAAR 336

Query:   122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
             PNPQGSFHYG I   RT+VLAN+A LI GKLRY VN ISY+N  TPLKLAD++NI G+F 
Sbjct:   337 PNPQGSFHYGTIPINRTLVLANAATLIYGKLRYTVNRISYINPTTPLKLADWYNISGVFD 396

Query:   182 VNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWA 241
               +I S P+ G + + TSV+ V LHE++E+VFQN+E+++QSWH+DG   + VGYGSG W 
Sbjct:   397 FKTIISTPTTGPAHIGTSVIDVELHEFVEIVFQNDERSIQSWHMDGTSAYAVGYGSGTWN 456

Query:   242 AEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 301
                R+ YNL D + RHT QVYP SWT ILVSLDN+GMWN+RS IW R+YLGQ+ Y++VWN
Sbjct:   457 VTMRKRYNLVDAVPRHTFQVYPLSWTTILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWN 516

Query:   302 AVHSLANEYDIPSNILVCGKA 322
                SL  E + P N+L CGKA
Sbjct:   517 DEKSLYTEAEPPLNVLYCGKA 537

GO:0005507 "copper ion binding" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
 Identities = 208/326 (63%), Positives = 249/326 (76%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FRISNVG++TS NFRIQGHTMKLVEVEGSHT+QNIY SLD+H+GQS SVLVT NQ P+DY
Sbjct:   212 FRISNVGVATSLNFRIQGHTMKLVEVEGSHTVQNIYTSLDIHLGQSYSVLVTANQAPQDY 271

Query:    62 YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
             YIV S+RFT+ VLT T+ILHY+NS    SGP+P GPT +I  S+ QART R NLTA+  R
Sbjct:   272 YIVISSRFTRKVLTTTSILHYSNSRKGVSGPVPNGPTLDIASSLYQARTIRRNLTASGPR 331

Query:   122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
             PNPQGS+HYG I   RTI+LANSAP INGK RYAVNG S+V  DTPLKLADYF IPG+F+
Sbjct:   332 PNPQGSYHYGLIKPGRTIILANSAPWINGKQRYAVNGASFVAPDTPLKLADYFKIPGVFN 391

Query:   182 VNSIQSVPSGGASS-VATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
             + SI + PSGG    + +SVM  N  E+IEVVFQN E ++QSWH+ GY F+VVG   GQW
Sbjct:   392 LGSIPTSPSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQW 451

Query:   241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
                 R  YNL D ++R T QVYP++WT I ++LDN GMWN+RS  W RQYLGQQFYL+V+
Sbjct:   452 TPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVY 511

Query:   301 NAVHSLANEYDIPSNILVCGKAVGHH 326
              +  S  +EY  P N L+CG+A G H
Sbjct:   512 TSSTSYRDEYPPPKNALMCGRAKGRH 537

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048653 "anther development" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
 Identities = 195/323 (60%), Positives = 240/323 (74%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FRISNVGL  S NFRIQ H MK+VEVEG+HT+Q  + SLDVHVGQS SVLVT +Q P+DY
Sbjct:   213 FRISNVGLQDSLNFRIQDHKMKVVEVEGTHTLQTTFSSLDVHVGQSYSVLVTADQTPRDY 272

Query:    62 YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
             Y+V S+RFT NVLT T I  Y+NS    SGP+P GPT +I WS+ QAR  R NL+A+  R
Sbjct:   273 YVVVSSRFTSNVLTTTGIFRYSNSAGGVSGPIPGGPTIQIDWSLNQARAIRTNLSASGPR 332

Query:   122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
             PNPQGS+HYG INTTRTI LA+SA  ++GK RYAVN +S+  +DTPLK+ADYF I G++ 
Sbjct:   333 PNPQGSYHYGMINTTRTIRLASSAGQVDGKQRYAVNSVSFKPADTPLKIADYFKIDGVYR 392

Query:   182 VNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWA 241
               SIQ  P+GG   + TSVMQV+   ++E++F+N+E  +QSWHLDGY FWVVG   GQW+
Sbjct:   393 SGSIQYQPTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGYSFWVVGMDGGQWS 452

Query:   242 AEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 301
              + R  YNL D + R T QVYP SWT IL++LDN GMWN+RS  W RQYLGQQ YL+V+ 
Sbjct:   453 PDSRNEYNLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYT 512

Query:   302 AVHSLANEYDIPSNILVCGKAVG 324
                SL +EY IP N L+CG+A G
Sbjct:   513 PSTSLRDEYPIPKNALLCGRASG 535

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 193/324 (59%), Positives = 236/324 (72%)

Query:     3 RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
             RISNVGL  S NFRIQ HTMKLVEVEG +TIQN++ SLDVHVGQS SVL+T +QP KDYY
Sbjct:   215 RISNVGLQNSLNFRIQNHTMKLVEVEGRYTIQNLFSSLDVHVGQSYSVLITADQPAKDYY 274

Query:    63 IVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARP 122
             +V S+RFT  +LT T +LHY+NS +P SGP+P GP  ++ WS  QAR  R NLTA+  RP
Sbjct:   275 VVVSSRFTSKILTTTGVLHYSNSVAPVSGPIPDGPI-KLSWSFNQARAIRTNLTASGPRP 333

Query:   123 NPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSV 182
             NPQGS+ YG IN TRTI LAN+   I GK RYAVN  S+  +DTPLKL DYF I G++  
Sbjct:   334 NPQGSYRYGVINITRTIRLANNLGHIEGKQRYAVNSASFYPADTPLKLVDYFKIDGVYKP 393

Query:   183 NSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA 242
              SI   P+ GA    TSVMQ +   ++EV+F+N+E  +QSWHLDGY F+VVG   G+W+ 
Sbjct:   394 GSISDQPTNGAIFPTTSVMQADFRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSP 453

Query:   243 EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302
               R+ YNL D + R T QVYP+SWT I ++LDN GMWNMRS IWERQYLGQQFY++V+  
Sbjct:   454 ASRKVYNLNDAILRCTIQVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTT 513

Query:   303 VHSLANEYDIPSNILVCGKAVGHH 326
               SL +EY IP N L+CG+A   H
Sbjct:   514 STSLRDEYLIPKNALLCGRASSSH 537

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
 Identities = 193/324 (59%), Positives = 237/324 (73%)

Query:     3 RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
             RISNVGL  S NFRIQ H MKLVEVEG+HTIQ  + SLDVHVGQS SVL+T +QP KDYY
Sbjct:   215 RISNVGLQNSLNFRIQNHKMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYY 274

Query:    63 IVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARP 122
             IV S+RFT  +L    +LHY+NS  P SGP+P  P  ++ WS  QAR  + NL A+  RP
Sbjct:   275 IVVSSRFTSKILITAGVLHYSNSAGPVSGPIPEAPI-QLRWSFDQARAIKTNLAASGPRP 333

Query:   123 NPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSV 182
             NPQG++HYGKI  TRTI LA+SA  INGK RYAVN  S+  +DTPLKLADYF I G+++ 
Sbjct:   334 NPQGTYHYGKIKVTRTIKLASSAGNINGKQRYAVNSASFYPTDTPLKLADYFKIAGVYNP 393

Query:   183 NSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA 242
              SI   P+ GA    TSVMQ +   ++E+VF+N E  +Q+WHLDGY F+VVG   G+W+A
Sbjct:   394 GSIPDQPTHGAIYPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFFVVGMELGKWSA 453

Query:   243 EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302
               R+ YNL D ++R T QVYP+SWT I VSLDN GMWN+RS +WERQYLGQQFY++V+  
Sbjct:   454 ASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTP 513

Query:   303 VHSLANEYDIPSNILVCGKAVGHH 326
               SL +EY IP N L+CG+A GHH
Sbjct:   514 STSLRDEYLIPKNALLCGRATGHH 537

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
 Identities = 187/324 (57%), Positives = 237/324 (73%)

Query:     3 RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
             RISNVGL  S NFRIQ H MKLVEVEG+HT+Q ++ SLDVHVGQS SVL+T +Q P+DYY
Sbjct:   215 RISNVGLQDSLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSYSVLITADQSPRDYY 274

Query:    63 IVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARP 122
             +V S+RFT  ++T T +L Y+ S +PASGP+P GPT ++ WS+ QAR  R NLTA+  RP
Sbjct:   275 VVVSSRFTDKIITTTGVLRYSGSSTPASGPIPGGPTIQVDWSLNQARAIRTNLTASGPRP 334

Query:   123 NPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSV 182
             NPQGS+HYG I   RTIV  +SA  INGK RY VN +S+V +DTPLKLAD+F I G++ +
Sbjct:   335 NPQGSYHYGLIPLIRTIVFGSSAGQINGKQRYGVNSVSFVPADTPLKLADFFKISGVYKI 394

Query:   183 NSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA 242
             NSI   P+ G   + TSV+QV+   +IE+VF+N E  +QS+HL+GY FWVVG   GQW  
Sbjct:   395 NSISDKPTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGYSFWVVGMDGGQWKT 454

Query:   243 EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 302
               R  YNL D ++R T QVYP+SWT I ++LDN GMWN+RS  W RQYLGQQ YL+V+ +
Sbjct:   455 GSRNGYNLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTS 514

Query:   303 VHSLANEYDIPSNILVCGKAVGHH 326
               SL +EY IP N  +CG+A G H
Sbjct:   515 STSLRDEYPIPKNSRLCGRARGRH 538

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030599 "pectinesterase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
 Identities = 184/330 (55%), Positives = 240/330 (72%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FRISNVGL  + NFRIQGH MKLVEVEG+HT+Q++Y SLD+HVGQS SVLVT++QP +DY
Sbjct:   217 FRISNVGLQHTLNFRIQGHQMKLVEVEGTHTVQSMYTSLDIHVGQSYSVLVTMDQPDQDY 276

Query:    62 YIVASTRFTKNVLTATAILHYTNS---HSPASGPLPTG-PTYEIHWSMKQARTFRWNLTA 117
              IV ST+F    L  ++ +HY+NS   HS ++  +    P  E+ WS+KQAR+ R NLTA
Sbjct:   277 DIVVSTKFVAKKLLVSSTIHYSNSRHSHSSSANSVHVQQPADELDWSIKQARSIRTNLTA 336

Query:   118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP 177
             +  RPNPQGS+HYG+I  +RT++L +SA L+  K RYA+NG+S+V  DTPLKLADYF I 
Sbjct:   337 SGPRPNPQGSYHYGRIKISRTLILESSAALVKRKQRYAINGVSFVPGDTPLKLADYFKIK 396

Query:   178 GIFSVNSIQSVPSGGASS-VATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYG 236
             G+F + SI   P  G    + TSVM  +  +++E++FQN EK +QS+HLDGY FWVVG  
Sbjct:   397 GVFKMGSIPDKPRRGRGMRMETSVMGAHHRDFLEIIFQNREKIVQSYHLDGYSFWVVGTD 456

Query:   237 SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFY 296
              G W+   RR YNL D ++R T QVYP+SWT + V+LDN GMWN+RS  W RQYLGQQFY
Sbjct:   457 RGTWSKASRREYNLRDAISRSTTQVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFY 516

Query:   297 LKVWNAVHSLANEYDIPSNILVCGKAVGHH 326
             L+V++  HSL +EY +P N L+CG+A   H
Sbjct:   517 LRVYSPTHSLRDEYLLPKNALLCGRASNKH 546

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 174/324 (53%), Positives = 232/324 (71%)

Query:     2 FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
             FR+SNVGL TS N  I GH +KL+EVEG+HT+Q +Y SLD+HVGQ+ S LVT++QPP++Y
Sbjct:   216 FRVSNVGLQTSLNLEILGHQLKLIEVEGTHTVQTMYTSLDIHVGQTYSFLVTMDQPPQNY 275

Query:    62 YIVASTRFTKNVLTATAILHYTNS--HSPASGPLPTGPTYEIHWSMKQARTFRWNLTANA 119
              IV STRF    +   A LHY+NS  H   +   P  P  ++ WS+KQA++ R NLTA+ 
Sbjct:   276 SIVVSTRFINAEVVIRATLHYSNSKGHKIITARRPD-PD-DVEWSIKQAQSIRTNLTASG 333

Query:   120 ARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGI 179
              R NPQGS+HYGK+  +RT++L +SA L+  K RYA+NG+S+V SDTPLKLAD+F I  +
Sbjct:   334 PRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKDV 393

Query:   180 FSVNSIQSVPS-GGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG 238
             F V +I   P  GG   + T+VM  + + ++E++FQN EK +QS+HLDGY+FWVVG   G
Sbjct:   394 FKVGTIPDKPRRGGGIRLDTAVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKG 453

Query:   239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298
              W+   RR YNL D ++R T QVYP+SWT + V+LDN GMWN+RS  W RQYLGQQFYL+
Sbjct:   454 IWSRASRREYNLKDAISRSTTQVYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLR 513

Query:   299 VWNAVHSLANEYDIPSNILVCGKA 322
             V +  HS  +EY +P N L+CG+A
Sbjct:   514 VHSPNHSPKDEYPLPKNALLCGRA 537

GO:0005507 "copper ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
PLN02835	539	PLN02835, PLN02835, oxidoreductase	0.0
PLN02354	552	PLN02354, PLN02354, copper ion binding / oxidoredu	1e-161
PLN02991	543	PLN02991, PLN02991, oxidoreductase	1e-146
PLN02792	536	PLN02792, PLN02792, oxidoreductase	1e-137
PLN02168	545	PLN02168, PLN02168, copper ion binding / pectinest	1e-118
PLN00044	596	PLN00044, PLN00044, multi-copper oxidase-related p	2e-99
TIGR03388	541	TIGR03388, ascorbase, L-ascorbate oxidase, plant t	2e-38
PLN02604	566	PLN02604, PLN02604, oxidoreductase	2e-35
pfam00394	146	pfam00394, Cu-oxidase, Multicopper oxidase	1e-31
pfam07731	135	pfam07731, Cu-oxidase_2, Multicopper oxidase	4e-31
PLN02191	574	PLN02191, PLN02191, L-ascorbate oxidase	9e-30
TIGR03389	539	TIGR03389, laccase, laccase, plant	1e-26
TIGR03390	538	TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu	3e-09
COG2132	451	COG2132, SufI, Putative multicopper oxidases [Seco	2e-04

>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase

 Score =  624 bits (1610), Expect = 0.0
 Identities = 277/327 (84%), Positives = 301/327 (92%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           MFRISNVGLSTS NFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSV+VLVTLNQ PKD
Sbjct: 213 MFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKD 272

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           YYIVASTRFT+ +LTATA+LHY+NS +PASGPLP  P+ E+HWSM+QART+RWNLTA+AA
Sbjct: 273 YYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAA 332

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           RPNPQGSFHYGKI  T+TIVLANSAPLINGK RYAVNG+SYVNSDTPLKLADYF IPG+F
Sbjct: 333 RPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVF 392

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           SVNSIQS+PSGG + VATSVMQ +LH+++EVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW
Sbjct: 393 SVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 452

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
              KR  YNL D LTRHTAQVYP+SWT ILVSLDNQGMWNMRSAIWERQYLGQQFYL+VW
Sbjct: 453 TPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVW 512

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHHP 327
           N VHSLANEYDIP N L+CGKA+G HP
Sbjct: 513 NQVHSLANEYDIPDNALLCGKAIGRHP 539

Length = 539

>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase

 Score =  461 bits (1189), Expect = e-161
 Identities = 187/326 (57%), Positives = 235/326 (72%), Gaps = 4/326 (1%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           +RI NVGL +S NFRIQGH MKLVE+EGSH +QN YDSLDVHVGQ  SVLVT NQ PKDY
Sbjct: 219 YRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDY 278

Query: 62  YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
           Y+VASTRF K VLT T I+ Y     PAS  LP  P     WS+ Q R+FRWNLTA+AAR
Sbjct: 279 YMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPVGWA-WSLNQFRSFRWNLTASAAR 337

Query: 122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP-GIF 180
           PNPQGS+HYGKIN TRTI L NSA  ++GKLRYA+NG+S+V+ +TPLKLA+YF +   +F
Sbjct: 338 PNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVF 397

Query: 181 SVNSIQSVPSG--GASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG 238
             ++I+  P        +  +V+ +    ++E++F+N+EK+MQSWHLDGY F+ V    G
Sbjct: 398 KYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPG 457

Query: 239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK 298
            W  EKR+ YNL D ++RHT QVYP+SW  IL++ DN GMWN+RS  WER+YLGQQ Y  
Sbjct: 458 TWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYAS 517

Query: 299 VWNAVHSLANEYDIPSNILVCGKAVG 324
           V +   SL +EY++P N L+CGK  G
Sbjct: 518 VLSPERSLRDEYNMPENALLCGKVKG 543

Length = 552

>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase

 Score =  424 bits (1090), Expect = e-146
 Identities = 199/325 (61%), Positives = 241/325 (74%), Gaps = 1/325 (0%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
            RISNVGL  S NFRIQ HTMKLVEVEG+HTIQ  + SLDVHVGQS SVL+T +QP KDY
Sbjct: 214 LRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDY 273

Query: 62  YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
           YIV S+RFT  +L  T +LHY+NS  P SGP+P GP  ++ WS  QAR  + NLTA+  R
Sbjct: 274 YIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI-QLSWSFDQARAIKTNLTASGPR 332

Query: 122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
           PNPQGS+HYGKIN TRTI LANSA  I GK RYAVN  S+  +DTPLKLADYF I G+++
Sbjct: 333 PNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKIAGVYN 392

Query: 182 VNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWA 241
             SI   P+ GA    TSVMQ +   ++E+VF+N E  +Q+WHLDGY F+VVG   G+W+
Sbjct: 393 PGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWS 452

Query: 242 AEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN 301
           A  R+ YNL D ++R T QVYP+SWT I VSLDN GMWN+RS +WERQYLGQQFY++V+ 
Sbjct: 453 AASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYT 512

Query: 302 AVHSLANEYDIPSNILVCGKAVGHH 326
              SL +EY IP N L+CG+A GHH
Sbjct: 513 TSTSLRDEYLIPKNALLCGRATGHH 537

Length = 543

>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase

 Score =  400 bits (1029), Expect = e-137
 Identities = 177/326 (54%), Positives = 236/326 (72%), Gaps = 1/326 (0%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           FRISNVGL TS NF I GH +KL+EVEG+HT+Q++Y SLD+HVGQ+ SVLVT++QPP++Y
Sbjct: 205 FRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNY 264

Query: 62  YIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAAR 121
            IV STRF    +  ++ LHY+NS              ++ WS+KQA++ R NLTA+  R
Sbjct: 265 SIVVSTRFIAAKVLVSSTLHYSNSKGHKIIHARQPDPDDLEWSIKQAQSIRTNLTASGPR 324

Query: 122 PNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFS 181
            NPQGS+HYGK+  +RT++L +SA L+  K RYA+NG+S+V SDTPLKLAD+F I G+F 
Sbjct: 325 TNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFK 384

Query: 182 VNSIQSVP-SGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
           V SI   P  GG   + TSVM  + + ++E++FQN EK +QS+HLDGY+FWVVG   G W
Sbjct: 385 VGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIW 444

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW 300
           +   RR YNL D ++R T QVYP+SWT + V+LDN GMWN+RS  W RQYLGQQFYL+V+
Sbjct: 445 SRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVY 504

Query: 301 NAVHSLANEYDIPSNILVCGKAVGHH 326
           +  HSL +EY +P N L+CG+A   +
Sbjct: 505 SPTHSLKDEYPLPKNALLCGRASNKN 530

Length = 536

>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase

 Score =  352 bits (904), Expect = e-118
 Identities = 160/336 (47%), Positives = 216/336 (64%), Gaps = 21/336 (6%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP--- 58
            RISNVGL T  NFRIQ H M LVE EG++  + +Y SLD+HVGQS SVLVT    P   
Sbjct: 213 LRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGI 272

Query: 59  -KDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGP-TYEIHWSMKQARTFRWNLT 116
            + YYIVA+ RFT   L   A++ Y NS     GPLP  P  ++   S++QA + R +L 
Sbjct: 273 YRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLN 332

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN- 175
             AAR NPQGS+HYG+IN TRTI+L N   L +GKLRY +NG+S+V   TPLKL D+F  
Sbjct: 333 VGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQL 392

Query: 176 ----IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFW 231
               IPG+F V      PS    ++ TSV+ ++  ++  +VFQN   +++S+H+DGY+F+
Sbjct: 393 NDTIIPGMFPV-----YPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFF 447

Query: 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYL 291
           VVGYG G W+  K+  YNL D ++R T QVYP SWT IL+++DNQGMWN+RS   E+ YL
Sbjct: 448 VVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYL 507

Query: 292 GQQFYLKVWN------AVHSLANEYDIPSNILVCGK 321
           GQ+ Y++V        +   + +E  IP N++ CGK
Sbjct: 508 GQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGK 543

Length = 545

>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional

 Score =  305 bits (781), Expect = 2e-99
 Identities = 162/328 (49%), Positives = 210/328 (64%), Gaps = 10/328 (3%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ-PPKD 60
           FR+ NVG++TS NFRIQGH + LVE EGS+T Q  Y +LD+HVGQS S L+T++Q    D
Sbjct: 229 FRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTD 288

Query: 61  YYIVASTRFTKNV----LTATAILHYTNSHSPASGPLPTGPT--YEIHWSMKQARTFRWN 114
           YY+VAS RF        LT  AILHY+NS  PASGPLP  P   Y+  +S+ QAR+ RWN
Sbjct: 289 YYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWN 348

Query: 115 LTANAARPNPQGSFHYGKINTTRTIVLANSAP-LINGKLRYAVNGISYVNSDTPLKLADY 173
           +TA+ ARPNPQGSFHYG I  T   +L + AP LI+GKLR  +N ISY+   TPL LA  
Sbjct: 349 VTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQI 408

Query: 174 FNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 233
           FN+PG+F ++   + P      + TS++      ++E++FQNN   +QS+HLDGY F+VV
Sbjct: 409 FNVPGVFKLD-FPNHPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVV 467

Query: 234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQ 293
           G   G W    R TYN  D + R T QV+P +WT ILV LDN G+WN+R    +  YLGQ
Sbjct: 468 GMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQ 527

Query: 294 QFYLKVWNAV-HSLANEYDIPSNILVCG 320
           + Y+ V N   +S      IP N + CG
Sbjct: 528 EVYINVVNPEDNSNKTVLPIPDNAIFCG 555

Length = 596

>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type

 Score =  142 bits (359), Expect = 2e-38
 Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 38/342 (11%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ-PPKD 60
            RI++     + NF I+GH + +VE +G++        +D++ G++ SVL+T +Q P ++
Sbjct: 215 LRIASTTALAALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRN 274

Query: 61  YYIVASTRFTK-NVLTATAILHYTNSH---SPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y+I    R  K N      +L+Y  +     P + P P  P ++      +++ F   + 
Sbjct: 275 YWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPP-PVTPAWD---DFDRSKAFSLAIK 330

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
           A    P P  +         R IVL N+   ING  ++A+N +S     TP   +  +N+
Sbjct: 331 AAMGSPKPPETSD-------RRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNL 383

Query: 177 PGIFSVNS----------IQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
              F              I   P    ++    + ++  +  ++V+ QN      N    
Sbjct: 384 LNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSET 443

Query: 221 QSWHLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
             WHL G+DFWV+GYG G++      ++YNL +   R+T  ++P  WT +    DN G+W
Sbjct: 444 HPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVW 503

Query: 280 NMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGK 321
                I    ++G          V  +     +P   L CG 
Sbjct: 504 AFHCHIEPHLHMGMGVVFA--EGVEKVGK---LPKEALGCGL 540

Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541

>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase

 Score =  134 bits (340), Expect = 2e-35
 Identities = 94/342 (27%), Positives = 165/342 (48%), Gaps = 32/342 (9%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYY 62
           RIS++   ++ +F+I+GH M +VE +G +    +  +L ++ G++ SVLV  +Q P   Y
Sbjct: 237 RISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNY 296

Query: 63  IVASTRFTKNVLT--ATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
            V ++  ++N  T    AI +Y  +H P   P PT P     W+  + R     L  + A
Sbjct: 297 WVTTSVVSRNNTTPPGLAIFNYYPNH-PRRSP-PTVPPSGPLWNDVEPR-----LNQSLA 349

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
                G  H   + + R IVL N+   +NG  R++VN +S+    TP  +A   N+ G F
Sbjct: 350 IKARHGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAF 409

Query: 181 SVN-----------SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTMQSW 223
                          I + P+   ++ + S+ ++  +  ++++ QN      N      W
Sbjct: 410 DQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPW 469

Query: 224 HLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMR 282
           HL G+DFWV+GYG G++  +   + YNL D + ++T  V+P  WT +    DN G+W   
Sbjct: 470 HLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFH 529

Query: 283 SAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVG 324
             I    ++G     +    +  +     +PS+I+ CG++ G
Sbjct: 530 CHIESHFFMGMGVVFE--EGIERVGK---LPSSIMGCGESKG 566

Length = 566

>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase

 Score =  115 bits (289), Expect = 1e-31
 Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
            RI NV L  S NF I+GH M +VEV+G +      DSLD+  GQ  SVLVT NQ P +Y
Sbjct: 62  LRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQDPGNY 121

Query: 62  YIVASTRFTK-NVLTATAILHYTNS 85
           +IVAS      +  TA AIL Y+ +
Sbjct: 122 WIVASPNIPAFDNGTAAAILRYSGA 146

Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146

>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase

 Score =  113 bits (285), Expect = 4e-31
 Identities = 45/141 (31%), Positives = 57/141 (40%), Gaps = 6/141 (4%)

Query: 165 DTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWH 224
           DTP KL     I G     +    P  G     T V+ +   + +E+V QNN      +H
Sbjct: 1   DTPPKLPTLLQITGGNDRANWS--PDNGPPLGTTEVITLPNGDRVEIVLQNNTMGPHPFH 58

Query: 225 LDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSA 284
           L G+ F V+G G G W      TYNL D + R T QV P  W  I    DN G W     
Sbjct: 59  LHGHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCH 116

Query: 285 IWERQYLGQQFYLKVWNAVHS 305
           I    +L Q    +      S
Sbjct: 117 ILW--HLDQGMMGQFVVDPGS 135

This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135

>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase

 Score =  118 bits (297), Expect = 9e-30
 Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 33/312 (10%)

Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQ-PPKDY 61
           R+++     S N  +QGH + +VE +G++      D +D++ G+S SVL+T +Q P ++Y
Sbjct: 239 RLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNY 298

Query: 62  YIVASTRFTK-NVLTATAILHY---TNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           YI    R  K N   A  IL+Y     S  P+S P P  P ++     ++++ F   + +
Sbjct: 299 YISVGVRGRKPNTTQALTILNYVTAPASKLPSSPP-PVTPRWD---DFERSKNFSKKIFS 354

Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP 177
               P+P   +        + ++L N+  LI+G  ++A+N +S V   TP   +  +N+ 
Sbjct: 355 AMGSPSPPKKYR-------KRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLK 407

Query: 178 GIFSVNS----------IQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE------KTMQ 221
             F+  S          I + P    ++    +     +  ++V+ QN          + 
Sbjct: 408 LGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIH 467

Query: 222 SWHLDGYDFWVVGYGSGQWAAE-KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
            WHL G+DFWV+GYG G++      +TYNL +   R+TA +YP  WT I    DN G+W 
Sbjct: 468 PWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWF 527

Query: 281 MRSAIWERQYLG 292
               I    ++G
Sbjct: 528 FHCHIEPHLHMG 539

Length = 574

>gnl|CDD|234194 TIGR03389, laccase, laccase, plant

 Score =  109 bits (275), Expect = 1e-26
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 35/310 (11%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           + RI N  L+    F I  HT+ +VEV+ ++T      ++ +  GQ+ +VL+T +Q P  
Sbjct: 198 LLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGR 257

Query: 61  YYIVASTRFTKNV----LTATAILHYTNSHSPASGPLPTGPTY-EIHWSMKQARTFRWNL 115
           Y++ A             T TAIL Y  + + A   LPT P Y +   +   +   R   
Sbjct: 258 YFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLN 317

Query: 116 TANAARPNPQGSFHYGKINTT--RTIVLA------NSAPLING-KLRYAVNGISYVNSDT 166
           +A      P        I+     TI L       N+    NG +   ++N IS+V   T
Sbjct: 318 SAQYPANVPV------TIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTT 371

Query: 167 PLKLADYFNIPGIFSVN-----------SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN 215
            L  A YF I G+F+ +           +  ++P+   ++  T V+++  +  +E+V Q+
Sbjct: 372 ALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQD 431

Query: 216 -NEKTMQS--WHLDGYDFWVVGYGSGQWAAEKR-RTYNLADTLTRHTAQVYPQSWTVILV 271
            +    ++   HL GY+F+VVG G G +  +K    +NL D   R+T  V    W  I  
Sbjct: 432 TSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRF 491

Query: 272 SLDNQGMWNM 281
             DN G+W M
Sbjct: 492 VADNPGVWFM 501

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539

>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 70/322 (21%), Positives = 115/322 (35%), Gaps = 39/322 (12%)

Query: 4   ISNVGLSTSFNFRIQGH-TMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVT------LNQ 56
           I    LS   +  I+ H  + ++E +GS+T     D L +  GQ  SVL        L  
Sbjct: 213 IGATALSL-ISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVLFKAKTEDELCG 271

Query: 57  PPK-DYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 115
             K  Y+I   TR    V    A+L Y +  +     +P  P   +           + L
Sbjct: 272 GDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPL--PNSTYDWLEYEL 329

Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANS-APLINGKLRYAVNGISYVNS--DTPLKLAD 172
              +   N    F      T R ++ A+     +NG++ +  NG+S+  S   TP  +  
Sbjct: 330 EPLSEENNQ--DFPTLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDI 387

Query: 173 YFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQS--------WH 224
           Y N  G+ +  +  +  +       T      + E +E+V+QN               +H
Sbjct: 388 YEN--GLPATPNYTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFH 445

Query: 225 LDGYDFWVVGYGSGQWAAE------------KRRTYNLADTLTRHTAQVYPQSWTVILVS 272
             G  F+ +G G G++ A              R T  L            P  W    + 
Sbjct: 446 AHGRHFYDIGGGDGEYNATANEAKLENYTPVLRDTTMLY-RYAVKVVPGAPAGWRAWRIR 504

Query: 273 LDNQGMWNMRSAIWERQYLGQQ 294
           + N G+W M   I +   +G Q
Sbjct: 505 VTNPGVWMMHCHILQHMVMGMQ 526

This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538

>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP-PKD 60
            R+ N G + +++  + G  + ++ V+G        D L +  G+   VLV +N      
Sbjct: 211 LRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMNDGGAVT 270

Query: 61  YYIVASTRF 69
              +     
Sbjct: 271 LTALGEDMP 279

Length = 451

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
PLN02835	539	oxidoreductase	100.0
PLN02991	543	oxidoreductase	100.0
PLN02354	552	copper ion binding / oxidoreductase	100.0
PLN02792	536	oxidoreductase	100.0
PLN00044	596	multi-copper oxidase-related protein; Provisional	100.0
PLN02168	545	copper ion binding / pectinesterase	100.0
KOG1263	563	consensus Multicopper oxidases [Secondary metaboli	100.0
PLN02604	566	oxidoreductase	100.0
TIGR03389	539	laccase laccase, plant. Members of this protein fa	100.0
TIGR03388	541	ascorbase L-ascorbate oxidase, plant type. Members	100.0
PLN02191	574	L-ascorbate oxidase	100.0
TIGR03390	538	ascorbOXfungal L-ascorbate oxidase, fungal type. T	100.0
TIGR01480	587	copper_res_A copper-resistance protein, CopA famil	100.0
PRK10965	523	multicopper oxidase; Provisional	100.0
PRK10883	471	FtsI repressor; Provisional	100.0
COG2132	451	SufI Putative multicopper oxidases [Secondary meta	100.0
PF07731	138	Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01	100.0
PF00394	159	Cu-oxidase: Multicopper oxidase; InterPro: IPR0011	99.88
TIGR02376	311	Cu_nitrite_red nitrite reductase, copper-containin	99.39
TIGR02376	311	Cu_nitrite_red nitrite reductase, copper-containin	99.25
PLN02604	566	oxidoreductase	99.09
PF07732	117	Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01	98.84
PF00394	159	Cu-oxidase: Multicopper oxidase; InterPro: IPR0011	98.55
TIGR03388	541	ascorbase L-ascorbate oxidase, plant type. Members	98.54
TIGR03095	148	rusti_cyanin rusticyanin. Rusticyanin is a blue co	98.2
PLN02191	574	L-ascorbate oxidase	98.1
TIGR02656	99	cyanin_plasto plastocyanin. Members of this family	97.86
TIGR01480	587	copper_res_A copper-resistance protein, CopA famil	97.85
TIGR03096	135	nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de	97.75
TIGR03389	539	laccase laccase, plant. Members of this protein fa	97.72
PLN02168	545	copper ion binding / pectinesterase	97.68
PLN02835	539	oxidoreductase	97.67
PRK10965	523	multicopper oxidase; Provisional	97.5
PLN00044	596	multi-copper oxidase-related protein; Provisional	97.44
PRK10883	471	FtsI repressor; Provisional	97.43
PLN02792	536	oxidoreductase	97.42
PLN02354	552	copper ion binding / oxidoreductase	97.37
TIGR03390	538	ascorbOXfungal L-ascorbate oxidase, fungal type. T	97.36
PF13473	104	Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D	97.29
PLN02991	543	oxidoreductase	97.0
PRK02888	635	nitrous-oxide reductase; Validated	96.91
PF00127	99	Copper-bind: Copper binding proteins, plastocyanin	96.65
PF07731	138	Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01	96.58
PRK02710	119	plastocyanin; Provisional	96.48
TIGR02375	116	pseudoazurin pseudoazurin. Pseudoazurin, also call	96.3
KOG1263	563	consensus Multicopper oxidases [Secondary metaboli	95.45
TIGR02657	83	amicyanin amicyanin. Members of this family are am	94.92
COG2132	451	SufI Putative multicopper oxidases [Secondary meta	94.12
TIGR03102	115	halo_cynanin halocyanin domain. Halocyanins are bl	94.0
TIGR02866	201	CoxB cytochrome c oxidase, subunit II. Cytochrome	93.97
PF14344	122	DUF4397: Domain of unknown function (DUF4397)	93.44
COG4454	158	Uncharacterized copper-binding protein [Inorganic	93.4
PF00116	120	COX2: Cytochrome C oxidase subunit II, periplasmic	93.21
COG3794	128	PetE Plastocyanin [Energy production and conversio	91.38
COG1622	247	CyoA Heme/copper-type cytochrome/quinol oxidases,	87.88
TIGR01433	226	CyoA cytochrome o ubiquinol oxidase subunit II. Th	84.29
MTH00140	228	COX2 cytochrome c oxidase subunit II; Provisional	83.34
PF12690	82	BsuPI: Intracellular proteinase inhibitor; InterPr	81.04

>PLN02835 oxidoreductase

Probab=100.00  E-value=1.5e-70  Score=537.55  Aligned_cols=327  Identities=85%  Similarity=1.361  Sum_probs=249.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||++++|+.++.|.|++||||||||++++++|+||||+...+.....+..|||
T Consensus       213 RlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~~ail  292 (539)
T PLN02835        213 MFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVL  292 (539)
T ss_pred             EEEEEEcCCCccEEEEECCCEEEEEEECCccCCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcceEEEE
Confidence            89999999999999999999999999999999999999999999999999999998889999999764433446789999


Q ss_pred             EecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcCcc
Q 020366           81 HYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGIS  160 (327)
Q Consensus        81 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~~  160 (327)
                      +|.++..+.+.++|..|..+..+..+.+....+.+.+....+.|...+.......++++.+...+...+|...|+|||++
T Consensus       293 ~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s  372 (539)
T PLN02835        293 HYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVS  372 (539)
T ss_pred             EECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEECCcc
Confidence            99876433333344323211111111111122223332222332211111112335565554322223466789999999


Q ss_pred             CcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCC
Q 020366          161 YVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW  240 (327)
Q Consensus       161 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~  240 (327)
                      |..|.+|+|...+.+.+++|+.+.....+.+...+.+++++.++.|++|||+|+|.+...||||||||+||||++|.|.|
T Consensus       373 ~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~  452 (539)
T PLN02835        373 YVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW  452 (539)
T ss_pred             cCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCC
Confidence            99999999877666667777754322223333355678899999999999999999989999999999999999999999


Q ss_pred             CccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCchhhcc
Q 020366          241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG  320 (327)
Q Consensus       241 ~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~~C~  320 (327)
                      +......+|+.||++|||+.|+++||++|||+|||||+|+|||||++|+.+||+++|.|.++.+...+..++|+++++||
T Consensus       453 ~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg  532 (539)
T PLN02835        453 TPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCG  532 (539)
T ss_pred             CcccccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccc
Confidence            76555567999999999999999999999999999999999999999999999999999977665545678999999999


Q ss_pred             ccCCCCC
Q 020366          321 KAVGHHP  327 (327)
Q Consensus       321 ~~~~~~~  327 (327)
                      .-++..|
T Consensus       533 ~~~~~~~  539 (539)
T PLN02835        533 KAIGRHP  539 (539)
T ss_pred             cCccCCC
Confidence            8877654

>PLN02991 oxidoreductase

Probab=100.00  E-value=6.2e-70  Score=531.28  Aligned_cols=324  Identities=61%  Similarity=1.044  Sum_probs=247.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+.+.++|+||||+|+|||+||.+++|+.++.|.|++||||||||+++|+.++||||+...+.....++.|||
T Consensus       213 RlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i~~~~~~~~~~~~~~AIl  292 (543)
T PLN02991        213 RLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVL  292 (543)
T ss_pred             EEEEEeccCCeeEEEEECCCEEEEEEeCCccccceeeeEEEEcCCcEEEEEEECCCCCCcEEEEEeeccCCCCcceEEEE
Confidence            89999999999999999999999999999999999999999999999999999999889999999875544446789999


Q ss_pred             EecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcCcc
Q 020366           81 HYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGIS  160 (327)
Q Consensus        81 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~~  160 (327)
                      +|+++..+.+.+.|..|. +..++.+.....+..|.+....+.|...+.......++++.+....+..+|..+|+|||++
T Consensus       293 ~Y~g~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s  371 (543)
T PLN02991        293 HYSNSAGPVSGPIPDGPI-QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSAS  371 (543)
T ss_pred             EeCCCCCCCCCCCCCCCc-cccccccchhhhhhcccCCCCCCCCCccccccccccceeEEEeecccccCceEEEEECCCc
Confidence            999864322223333332 2222222111122344443333334322211112344444444322222456789999999


Q ss_pred             CcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCC
Q 020366          161 YVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW  240 (327)
Q Consensus       161 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~  240 (327)
                      |..|.+|+|...+.+..|+|+.+.....|.+......++++.++.|++|||+|+|.+...||||||||+||||++|.|.|
T Consensus       372 ~~~p~~p~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~f  451 (543)
T PLN02991        372 FYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKW  451 (543)
T ss_pred             cCCCCCChhhhhhhcccCccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcceEEEEeCCCCC
Confidence            99999999987776677887654222223222333456788999999999999999889999999999999999999999


Q ss_pred             CccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCchhhcc
Q 020366          241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG  320 (327)
Q Consensus       241 ~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~~C~  320 (327)
                      +..+...||+.||++|||+.||++||++|||+|||||+|+|||||..|+.+||++++.|.++.+...+..++|++.++||
T Consensus       452 ~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg  531 (543)
T PLN02991        452 SAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCG  531 (543)
T ss_pred             CcccccccCCCCCCcccEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccc
Confidence            87655679999999999999999999999999999999999999988999999999988877666555688999999998


Q ss_pred             ccCCC
Q 020366          321 KAVGH  325 (327)
Q Consensus       321 ~~~~~  325 (327)
                      .-++.
T Consensus       532 ~~~~~  536 (543)
T PLN02991        532 RATGH  536 (543)
T ss_pred             cCCCC
Confidence            76664

>PLN02354 copper ion binding / oxidoreductase

Probab=100.00  E-value=6e-70  Score=534.17  Aligned_cols=325  Identities=57%  Similarity=1.014  Sum_probs=246.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+...+.|+||||+|+|||+||++++|..++.|.|++||||||||++++++|+|||++...+........|||
T Consensus       218 RlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~ail  297 (552)
T PLN02354        218 RYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGII  297 (552)
T ss_pred             EEEEEecCCCceEEEEECCceEEEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccCCCccEEEEE
Confidence            89999999999999999999999999999999999999999999999999999999889999999865444456789999


Q ss_pred             EecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcCcc
Q 020366           81 HYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGIS  160 (327)
Q Consensus        81 ~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~~  160 (327)
                      +|.++..+.+...|..|. +..+..+.+.++..++.+....+.|...........++++.+...+...+|..+|+|||++
T Consensus       298 ~Y~g~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNn~s  376 (552)
T PLN02354        298 RYEGGKGPASPELPEAPV-GWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVS  376 (552)
T ss_pred             EECCCCCCCCCCCCCCCc-ccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCceEEEEECCcc
Confidence            998765322222332221 1112223333333334433222333221111112345555554322223456789999999


Q ss_pred             CcCCCCccccccccCC-CCccccCC-CCCCCC-CCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEecc
Q 020366          161 YVNSDTPLKLADYFNI-PGIFSVNS-IQSVPS-GGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGS  237 (327)
Q Consensus       161 ~~~~~~P~l~~~~~~~-~~~~~~~~-~~~~p~-~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~  237 (327)
                      |..|++|+|.+.+.++ .|.++.+. ....|. ....+.+++++.++.|++|||+|+|.+...||||||||+||||++|.
T Consensus       377 ~~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F~Vlg~G~  456 (552)
T PLN02354        377 HVDPETPLKLAEYFGVADKVFKYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEP  456 (552)
T ss_pred             CCCCCCChHHhhhhcccCCccccCccccCCccccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccEEEEeecC
Confidence            9999999987765433 35554321 111121 11234467889999999999999999888999999999999999999


Q ss_pred             CCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCchh
Q 020366          238 GQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNIL  317 (327)
Q Consensus       238 G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~  317 (327)
                      |.|+.+....+|+.||++|||+.||++||++|||+|||||+|+|||||..|+++||+++++|.++.+.+++..++|++.+
T Consensus       457 G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~  536 (552)
T PLN02354        457 GTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENAL  536 (552)
T ss_pred             CCCCccccccCCcCCCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCcccc
Confidence            99987655678999999999999999999999999999999999999988999999999999988877765667999999


Q ss_pred             hccccCCCC
Q 020366          318 VCGKAVGHH  326 (327)
Q Consensus       318 ~C~~~~~~~  326 (327)
                      .|++.++++
T Consensus       537 ~C~~~~~~~  545 (552)
T PLN02354        537 LCGKVKGLP  545 (552)
T ss_pred             ccccccCCC
Confidence            999888664

>PLN02792 oxidoreductase

Probab=100.00  E-value=1.6e-69  Score=528.86  Aligned_cols=325  Identities=54%  Similarity=0.976  Sum_probs=249.0

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||++++|..+++|.|++||||||||++++++|+|||++...+.+....+.|||
T Consensus       204 RlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~a~~~~~~~~~~~~ail  283 (536)
T PLN02792        204 RFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTL  283 (536)
T ss_pred             EEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcceeEEEEccCceEEEEEEcCCCCceEEEEEEeccCCCCCceEEEE
Confidence            89999999999999999999999999999999999999999999999999999999889999999876544446788999


Q ss_pred             EecCCCCCCCCCCCCCC-CCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcCc
Q 020366           81 HYTNSHSPASGPLPTGP-TYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGI  159 (327)
Q Consensus        81 ~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~  159 (327)
                      +|+++....+ ..|..| .++..++.+....++..+.+..+.+.|+....+.....++++.+...+....+...|+|||+
T Consensus       284 ~Y~g~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~  362 (536)
T PLN02792        284 HYSNSKGHKI-IHARQPDPDDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGV  362 (536)
T ss_pred             EECCCCCCCC-CCCCCCCcCCccccccchhhhhhccCCCCCCCCCCcccccceeccceeEEecccccccCceeEEEECCc
Confidence            9987643211 112222 13333332221222233443223344543322222234455544432222345678999999


Q ss_pred             cCcCCCCccccccccCCCCccccCCCCCCCCC-CCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccC
Q 020366          160 SYVNSDTPLKLADYFNIPGIFSVNSIQSVPSG-GASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSG  238 (327)
Q Consensus       160 ~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G  238 (327)
                      +|..|++|+|...++++.|+++.+...+.|.. ......++++.++.|++|||||+|.+...||||||||+||||++|.|
T Consensus       363 s~~~p~~p~L~a~~~~~~g~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G  442 (536)
T PLN02792        363 SFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKG  442 (536)
T ss_pred             ccCCCCCchhhhhhhccCCCcCcccCccCCcccCCCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCceEEEeecCC
Confidence            99999999998776666677754322222221 12234578899999999999999988889999999999999999999


Q ss_pred             CCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCchhh
Q 020366          239 QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILV  318 (327)
Q Consensus       239 ~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~~  318 (327)
                      .|+......||+.||++|||+.|+++||++|||+|||||+|+||||+..|+.+||+++|.|.++.+...+..++|++.+.
T Consensus       443 ~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~  522 (536)
T PLN02792        443 IWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALL  522 (536)
T ss_pred             CCCcccccccCcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCc
Confidence            99876666899999999999999999999999999999999999999999999999999998776655556889999999


Q ss_pred             ccccCCCC
Q 020366          319 CGKAVGHH  326 (327)
Q Consensus       319 C~~~~~~~  326 (327)
                      ||..++.+
T Consensus       523 Cg~~~~~~  530 (536)
T PLN02792        523 CGRASNKN  530 (536)
T ss_pred             cccccCCC
Confidence            98776643

>PLN00044 multi-copper oxidase-related protein; Provisional

Probab=100.00  E-value=9.4e-69  Score=526.02  Aligned_cols=325  Identities=49%  Similarity=0.845  Sum_probs=242.7

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCC-ceEEEEEeccc----CCCce
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPK-DYYIVASTRFT----KNVLT   75 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~-~y~ir~~~~~~----~~~~~   75 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++||||||||+++|+++ +||||+...++    .+...
T Consensus       228 RlRiINaa~~~~~~fsIdgH~mtVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~  307 (596)
T PLN00044        228 RFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLT  307 (596)
T ss_pred             EEEEEEccCCceEEEEECCCEEEEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcc
Confidence            89999999999999999999999999999999999999999999999999999999754 89999875322    24467


Q ss_pred             eEEEEEecCCCCCCCCCCCCCC--CCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecc-ccccCCeE
Q 020366           76 ATAILHYTNSHSPASGPLPTGP--TYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANS-APLINGKL  152 (327)
Q Consensus        76 ~~ail~y~~~~~~~~~~~p~~p--~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~  152 (327)
                      +.|||+|.++..+.+.++|..|  .+++.++.++...+...+.+....+.|+....+......+.+.+... .....|..
T Consensus       308 ~~AIl~Y~~~~~~~~~~~P~~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  387 (596)
T PLN00044        308 GVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKL  387 (596)
T ss_pred             eeEEEEECCCCCCCCCCCCCCCcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeE
Confidence            8899999876432222234333  22333222222233222222112233332211111111122211110 00112567


Q ss_pred             EEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEE
Q 020366          153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWV  232 (327)
Q Consensus       153 ~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~V  232 (327)
                      +|+|||++|..|++|+|...+.++.|+|+.+.....| .......++++.+++|++|||+|+|.....||||||||+|||
T Consensus       388 ~~s~Nnvsf~~p~~p~L~a~~~~~~gv~~~~fp~~pp-~~~~~~~t~v~~~~~n~~VeiV~qn~~~~~HP~HLHGh~F~V  466 (596)
T PLN00044        388 RATLNEISYIAPSTPLMLAQIFNVPGVFKLDFPNHPM-NRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFV  466 (596)
T ss_pred             EEEECcccCCCCCCcchhhhhccCCCcccCCCCCCCC-ccccccCceEEEcCCCCEEEEEEeCCCCCCCCeeEcCccEEE
Confidence            8999999999999999987777777888755432222 222334678899999999999999987789999999999999


Q ss_pred             EEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCccc-ccccCC
Q 020366          233 VGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHS-LANEYD  311 (327)
Q Consensus       233 l~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~-~~~~~~  311 (327)
                      |++|.|.|+...+..||+.||++|||+.||++||++|||+|||||+|+||||++.|+++||+++|.|.++.+. ..+..+
T Consensus       467 vg~G~G~~~~~~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~  546 (596)
T PLN00044        467 VGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLP  546 (596)
T ss_pred             EeecCCCCCCCcccccccCCCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccC
Confidence            9999999997766789999999999999999999999999999999999999999999999999999877654 445688


Q ss_pred             CCCchhhccccCCCC
Q 020366          312 IPSNILVCGKAVGHH  326 (327)
Q Consensus       312 ~P~~~~~C~~~~~~~  326 (327)
                      +|++.+.||..++.+
T Consensus       547 pP~~~~~Cg~~~~~~  561 (596)
T PLN00044        547 IPDNAIFCGALSSLQ  561 (596)
T ss_pred             CCcccCcccccccCC
Confidence            999999998776543

>PLN02168 copper ion binding / pectinesterase

Probab=100.00  E-value=3.3e-68  Score=520.02  Aligned_cols=321  Identities=48%  Similarity=0.842  Sum_probs=233.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCC----CceEEEEEecccCCCcee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP----KDYYIVASTRFTKNVLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~----~~y~ir~~~~~~~~~~~~   76 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|..+++|.|++||||||||+++++.    ++||||+...++.....+
T Consensus       212 RlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~~~~~  291 (545)
T PLN02168        212 RLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGG  291 (545)
T ss_pred             EEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCCCcce
Confidence            8999999999999999999999999999999999999999999999999999998643    379999997655555678


Q ss_pred             EEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEE
Q 020366           77 TAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA  155 (327)
Q Consensus        77 ~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  155 (327)
                      .|||+|+++....+.++|..|. .+...+.+....+...+.|..+.+.|...+.+.....++++.+...+...+|..+|+
T Consensus       292 ~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  371 (545)
T PLN02168        292 VALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYT  371 (545)
T ss_pred             EEEEEECCCCCCCCCCCCCCCcccccccccchhhhhhhcCCCCCCCCCCcccccccccccceeEEecccccccCceEEEE
Confidence            9999998764322223333332 122111121112222334322223333222111223455555443211124567899


Q ss_pred             EcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEe
Q 020366          156 VNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGY  235 (327)
Q Consensus       156 iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~  235 (327)
                      |||++|..|.+|+|...++++.+.+..+.....|.+......++++.++.|++|||+|+|.....||||||||+||||++
T Consensus       372 iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~  451 (545)
T PLN02168        372 INGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGY  451 (545)
T ss_pred             ECCCccCCCCCchhhhhhcccccccccCCCccCCCcCccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCceEEEEC
Confidence            99999999999998665444333332221111121211223468899999999999999998889999999999999999


Q ss_pred             ccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE-----cCccc-cccc
Q 020366          236 GSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW-----NAVHS-LANE  309 (327)
Q Consensus       236 g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~-----~~~~~-~~~~  309 (327)
                      |.|.|+......+|+.||++|||+.||++||++|||+|||||+|+|||||..|||+||+++++|.     +|.+. ..+.
T Consensus       452 g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~  531 (545)
T PLN02168        452 GFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDE  531 (545)
T ss_pred             CCCCCCccccccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccc
Confidence            99999876556799999999999999999999999999999999999999999999999999984     22221 1224


Q ss_pred             CCCCCchhhccc
Q 020366          310 YDIPSNILVCGK  321 (327)
Q Consensus       310 ~~~P~~~~~C~~  321 (327)
                      .++|+++++||.
T Consensus       532 ~~~P~~~~~cg~  543 (545)
T PLN02168        532 NPIPGNVIRCGK  543 (545)
T ss_pred             cCCChhhccccc
Confidence            679999999974

>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.1e-64  Score=486.25  Aligned_cols=326  Identities=45%  Similarity=0.722  Sum_probs=267.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC----Ccee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN----VLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~----~~~~   76 (327)
                      ||||||+|....+.|+|+||+|+|||+||.+++|+.+++|.|++||||||||+++|.+++|||++...+...    ...+
T Consensus       220 ~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~~~t~  299 (563)
T KOG1263|consen  220 RLRIINAGLNTSLNFSIANHQLTVVEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPFNLTT  299 (563)
T ss_pred             EEEEEccccccceEEEECCeEEEEEEecceEEeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcceeeeE
Confidence            799999999999999999999999999999999999999999999999999999998889999999876644    6789


Q ss_pred             EEEEEecCCCCCCCCCCC----CCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeE
Q 020366           77 TAILHYTNSHSPASGPLP----TGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKL  152 (327)
Q Consensus        77 ~ail~y~~~~~~~~~~~p----~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~  152 (327)
                      .|+|+|.++..+.+...|    .+|.++..++.++++.++..+....+.+.|+++.++......+.+.+.......+++.
T Consensus       300 ~~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~  379 (563)
T KOG1263|consen  300 TGILRYSGSTHPASEKLPIYPFLPPGNDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKL  379 (563)
T ss_pred             EEEEEEeCCcccCcccCcccccCCcccCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEE
Confidence            999999985443333322    1233555666666666766565556677888766555555555555554322346788


Q ss_pred             EEEEcCccCcCCCCccccccccC-CCCccccCCCCCCCC--CC-CCcceeeEEEecCCcEEEEEEEeCCC---CcCceee
Q 020366          153 RYAVNGISYVNSDTPLKLADYFN-IPGIFSVNSIQSVPS--GG-ASSVATSVMQVNLHEYIEVVFQNNEK---TMQSWHL  225 (327)
Q Consensus       153 ~~~iN~~~~~~~~~P~l~~~~~~-~~~~~~~~~~~~~p~--~~-~~~~~~~~~~~~~g~~v~ivi~N~~~---~~HP~HL  225 (327)
                      +++||+.+|..|++|++.+.+.. ++|.++.+.....|.  +. +.+.+++++.+++++.||||++|.+.   ..|||||
T Consensus       380 ~~siN~isf~~P~tp~~l~~~~~~~~~~~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HL  459 (563)
T KOG1263|consen  380 RASINNISFVTPKTPSLLAAYFKNIPGYFTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHL  459 (563)
T ss_pred             EEEEcceEEECCCCchhhhhhhccCCccccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccce
Confidence            99999999999999988766554 466666554322211  21 23788999999999999999999873   5799999


Q ss_pred             cCCCeEEEEeccCCCCc--cccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          226 DGYDFWVVGYGSGQWAA--EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       226 HG~~F~Vl~~g~G~~~~--~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      |||+|||++.|.|+|+.  +....||+.+|+.||||.|||+||++|||.|||||+|+||||+.+|++.||+++|.|..+.
T Consensus       460 HG~~F~Vvg~g~G~~~~~~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~  539 (563)
T KOG1263|consen  460 HGYNFYVVGYGFGNWDPAKDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGE  539 (563)
T ss_pred             eceEEEEEEecccccCcCcChhhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCC
Confidence            99999999999999998  4446899999999999999999999999999999999999999999999999999999888


Q ss_pred             ccccccCCCCCchhhccccCCCC
Q 020366          304 HSLANEYDIPSNILVCGKAVGHH  326 (327)
Q Consensus       304 ~~~~~~~~~P~~~~~C~~~~~~~  326 (327)
                      +..+++.++|++.++||..++.+
T Consensus       540 ~~~~~~~~~P~~~~~cg~~~~~~  562 (563)
T KOG1263|consen  540 ESLSSEYPPPKNLPKCGRASGIP  562 (563)
T ss_pred             ccCCcCCCCCCCcccccccCCcC
Confidence            87767789999999999988764

>PLN02604 oxidoreductase

Probab=100.00  E-value=3e-63  Score=490.63  Aligned_cols=309  Identities=28%  Similarity=0.550  Sum_probs=223.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCC-CceEEEEEeccc-CCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KDYYIVASTRFT-KNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~-~~y~ir~~~~~~-~~~~~~~a   78 (327)
                      ||||||+|+.+.++|+||||+|+|||+||.+++|+++++|.|++||||||||++++++ ++||||+..... .+...++|
T Consensus       235 RlRlINa~~~~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~a  314 (566)
T PLN02604        235 RLRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGLA  314 (566)
T ss_pred             EEEEEeccccceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCcceeE
Confidence            8999999999999999999999999999999999999999999999999999999865 489999875432 24467899


Q ss_pred             EEEecCCCCCCCC--CCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEE
Q 020366           79 ILHYTNSHSPASG--PLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA  155 (327)
Q Consensus        79 il~y~~~~~~~~~--~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  155 (327)
                      ||+|++.....+.  ..+..+. ++.+...+....++. +.+. ..+ +       ....++++.+.......++..+|+
T Consensus       315 IL~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~-------~~~~d~~~~~~~~~~~~~~~~~w~  384 (566)
T PLN02604        315 IFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKA-RHGY-IHP-P-------PLTSDRVIVLLNTQNEVNGYRRWS  384 (566)
T ss_pred             EEEECCCCCCCCCCCCCCCCCcccccchhhcchhcccc-cccC-cCC-C-------CCCCCeEEEEeccccccCCeEEEE
Confidence            9999864321110  1111111 111101110000000 0000 000 1       123456665533222234567899


Q ss_pred             EcCccCcCCCCccccccccCCCCccccCCCCC-----------CCCCCCCcceeeEEEecCCcEEEEEEEeCC------C
Q 020366          156 VNGISYVNSDTPLKLADYFNIPGIFSVNSIQS-----------VPSGGASSVATSVMQVNLHEYIEVVFQNNE------K  218 (327)
Q Consensus       156 iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~-----------~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~------~  218 (327)
                      |||.+|..|..|+|...+...+++|+.+....           .+.+...+.+.+++.++.|++|||+|+|..      .
T Consensus       385 in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~  464 (566)
T PLN02604        385 VNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNS  464 (566)
T ss_pred             ECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCCCC
Confidence            99999998889988766555556665321100           001112344667899999999999999985      4


Q ss_pred             CcCceeecCCCeEEEEeccCCCCccc-cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEE
Q 020366          219 TMQSWHLDGYDFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYL  297 (327)
Q Consensus       219 ~~HP~HLHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~  297 (327)
                      ..||||||||+||||++|.|.|+... ...+|+.||++|||+.||++||++|||+|||||+|+|||||++|+..||+++|
T Consensus       465 ~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~  544 (566)
T PLN02604        465 ETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVF  544 (566)
T ss_pred             CCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEEEE
Confidence            57999999999999999999997542 34689999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCcccccccCCCCCchhhccccCC
Q 020366          298 KVWNAVHSLANEYDIPSNILVCGKAVG  324 (327)
Q Consensus       298 ~v~~~~~~~~~~~~~P~~~~~C~~~~~  324 (327)
                      ...  .+.+   .++|+++++|+..+|
T Consensus       545 ~e~--~~~~---~~~p~~~~~C~~~~~  566 (566)
T PLN02604        545 EEG--IERV---GKLPSSIMGCGESKG  566 (566)
T ss_pred             eeC--hhhc---cCCCCCcCccccCCC
Confidence            643  3433   678999999986654

>TIGR03389 laccase laccase, plant

Probab=100.00  E-value=5.6e-63  Score=487.33  Aligned_cols=311  Identities=27%  Similarity=0.430  Sum_probs=220.5

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC----CCcee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK----NVLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~----~~~~~   76 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|+++++|.|++||||||+|++++++|+||||+....++    ....+
T Consensus       198 RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~  277 (539)
T TIGR03389       198 LLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTT  277 (539)
T ss_pred             EEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEecCCCEEEEEEECCCCCceEEEEEeccccCccCCCCcce
Confidence            89999999999999999999999999999999999999999999999999999998889999999764321    23568


Q ss_pred             EEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecccc---------
Q 020366           77 TAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAP---------  146 (327)
Q Consensus        77 ~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------  146 (327)
                      .|||+|++.........+..|. .+......    ....+.+......|...    ...+++++.+.....         
T Consensus       278 ~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~----p~~~~~~~~~~~~~~~~~~~~~~~  349 (539)
T TIGR03389       278 TAILQYKGTSNSAKPILPTLPAYNDTAAATN----FSNKLRSLNSAQYPANV----PVTIDRRLFFTIGLGLDPCPNNTC  349 (539)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCchhhhhH----HHhhcccccccCCCCCC----CCCCCeEEEEEeecccccCccccc
Confidence            9999998754211111111111 11100000    00011111100001100    012344433332111         


Q ss_pred             -c-cCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCC-----------CCCCcceeeEEEecCCcEEEEEE
Q 020366          147 -L-INGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPS-----------GGASSVATSVMQVNLHEYIEVVF  213 (327)
Q Consensus       147 -~-~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~-----------~~~~~~~~~~~~~~~g~~v~ivi  213 (327)
                       . .....+|+|||++|..|..|+|...+.++.|.+..+.....|.           +-..+.+++++.++.|++|||+|
T Consensus       350 ~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi  429 (539)
T TIGR03389       350 QGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVL  429 (539)
T ss_pred             ccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEE
Confidence             0 1224689999999998999988655444444332211111110           01123367889999999999999


Q ss_pred             EeCC---CCcCceeecCCCeEEEEeccCCCCccc-cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhh
Q 020366          214 QNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQ  289 (327)
Q Consensus       214 ~N~~---~~~HP~HLHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~  289 (327)
                      +|.+   ...||||||||+||||++|.|.|+... ...+|+.||++|||++||++||++|||+|||||+|+|||||++|+
T Consensus       430 ~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~  509 (539)
T TIGR03389       430 QDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHT  509 (539)
T ss_pred             ecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchh
Confidence            9985   348999999999999999999997542 236899999999999999999999999999999999999999999


Q ss_pred             ccCceEEEEEEcCcccccccCCCCCchhhc
Q 020366          290 YLGQQFYLKVWNAVHSLANEYDIPSNILVC  319 (327)
Q Consensus       290 ~~Gm~~~~~v~~~~~~~~~~~~~P~~~~~C  319 (327)
                      .+||+++|.+....+...+.+++|+++++|
T Consensus       510 ~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c  539 (539)
T TIGR03389       510 TWGLKMAFLVDNGKGPNQSLLPPPSDLPSC  539 (539)
T ss_pred             hhcceEEEEEccCCCCccccCCCCccCCCC
Confidence            999999998864433333468899999999

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.

>TIGR03388 ascorbase L-ascorbate oxidase, plant type

Probab=100.00  E-value=1.4e-62  Score=484.43  Aligned_cols=304  Identities=27%  Similarity=0.529  Sum_probs=219.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCC-CceEEEEEeccc-CCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KDYYIVASTRFT-KNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~-~~y~ir~~~~~~-~~~~~~~a   78 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||++++|++++.|.|++||||||||++++++ ++||||+..... .....+.|
T Consensus       214 RlRliNa~~~~~~~~~id~h~~~VIa~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~a  293 (541)
T TIGR03388       214 RLRIASTTALAALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLT  293 (541)
T ss_pred             EEEEEcccccceEEEEECCCEEEEEEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEE
Confidence            8999999999999999999999999999999999999999999999999999999865 589999986543 22346889


Q ss_pred             EEEecCCCCCC--CCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEE
Q 020366           79 ILHYTNSHSPA--SGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA  155 (327)
Q Consensus        79 il~y~~~~~~~--~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  155 (327)
                      ||+|.+.....  +.+.|..|. .+.....    .....+.+....+.|.       ...++++.+.......++..+|+
T Consensus       294 iL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  362 (541)
T TIGR03388       294 VLNYYPNSPSRLPPTPPPVTPAWDDFDRSK----AFSLAIKAAMGSPKPP-------ETSDRRIVLLNTQNKINGYTKWA  362 (541)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCccccchhh----ccchhhhccccCCCCC-------CCCCcEEEEeccCcccCceEEEE
Confidence            99998754211  011111121 1110000    0000010100011111       12355554433222224556899


Q ss_pred             EcCccCcCCCCccccccccCCCCccccCCCC----------CCCCCCCCcceeeEEEecCCcEEEEEEEeCC------CC
Q 020366          156 VNGISYVNSDTPLKLADYFNIPGIFSVNSIQ----------SVPSGGASSVATSVMQVNLHEYIEVVFQNNE------KT  219 (327)
Q Consensus       156 iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~------~~  219 (327)
                      |||.+|..|..|+|.+...+..++|+.+...          ..+.....+.|++++.++.|++|||+|+|.+      ..
T Consensus       363 ~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~  442 (541)
T TIGR03388       363 INNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSE  442 (541)
T ss_pred             ECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCC
Confidence            9999999889999876654444444321100          0011123455678899999999999999974      45


Q ss_pred             cCceeecCCCeEEEEeccCCCCcc-ccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEE
Q 020366          220 MQSWHLDGYDFWVVGYGSGQWAAE-KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK  298 (327)
Q Consensus       220 ~HP~HLHG~~F~Vl~~g~G~~~~~-~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~  298 (327)
                      .||||||||+||||++|.|.|+.+ ....+|+.||++|||++||++||++|||+|||||+|+|||||++|+.+||+++|.
T Consensus       443 ~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~  522 (541)
T TIGR03388       443 THPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFA  522 (541)
T ss_pred             CCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEe
Confidence            799999999999999999999754 2346899999999999999999999999999999999999999999999999996


Q ss_pred             EEcCcccccccCCCCCchhhcc
Q 020366          299 VWNAVHSLANEYDIPSNILVCG  320 (327)
Q Consensus       299 v~~~~~~~~~~~~~P~~~~~C~  320 (327)
                      ..  .+.+   ..+|+++++|+
T Consensus       523 e~--~~~~---~~~P~~~~~C~  539 (541)
T TIGR03388       523 EG--VEKV---GKLPKEALGCG  539 (541)
T ss_pred             cc--cccc---CCCCccccCCC
Confidence            43  3434   56899999997

Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.

>PLN02191 L-ascorbate oxidase

Probab=100.00  E-value=1.7e-62  Score=484.57  Aligned_cols=307  Identities=29%  Similarity=0.522  Sum_probs=220.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCC-CceEEEEEecccC-CCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KDYYIVASTRFTK-NVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~-~~y~ir~~~~~~~-~~~~~~a   78 (327)
                      ||||||+|+.+.++|+||||+|+|||+||.+++|+++++|.|++||||||||+++|++ ++||||+...... ......|
T Consensus       237 RlRiINa~~~~~~~~~idgH~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~~~a  316 (574)
T PLN02191        237 RIRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALT  316 (574)
T ss_pred             EEEEEecCCceeEEEEECCCeEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCCceE
Confidence            8999999999999999999999999999999999999999999999999999999865 5899999764322 1234579


Q ss_pred             EEEecCCCCCC--CCCCCCCCC-CcccccccccccccccccccCCCC-CCCCCCCCCCcCceEEEEEeccccccCCeEEE
Q 020366           79 ILHYTNSHSPA--SGPLPTGPT-YEIHWSMKQARTFRWNLTANAARP-NPQGSFHYGKINTTRTIVLANSAPLINGKLRY  154 (327)
Q Consensus        79 il~y~~~~~~~--~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  154 (327)
                      ||+|.+.....  +.+.|..|. .+....    ......+......+ .|.       ...++++.+... ....+..+|
T Consensus       317 il~Y~~~~~~~~p~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~-~~~~~~~~~  384 (574)
T PLN02191        317 ILNYVTAPASKLPSSPPPVTPRWDDFERS----KNFSKKIFSAMGSPSPPK-------KYRKRLILLNTQ-NLIDGYTKW  384 (574)
T ss_pred             EEEECCCCCCCCCCCCCCCCCcccccchh----hcccccccccccCCCCCC-------cccceEEEeccc-ceeCCeEEE
Confidence            99998754311  111111111 111100    00111111100001 111       123455544321 112355689


Q ss_pred             EEcCccCcCCCCccccccccCCCCccccCCCCC-CCCC---------CCCcceeeEEEecCCcEEEEEEEeCC------C
Q 020366          155 AVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS-VPSG---------GASSVATSVMQVNLHEYIEVVFQNNE------K  218 (327)
Q Consensus       155 ~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~-~p~~---------~~~~~~~~~~~~~~g~~v~ivi~N~~------~  218 (327)
                      +|||++|..|.+|+|.+.+.+..+.|+.+.... .+..         ...+.+.+++.++.|++|||+|+|.+      .
T Consensus       385 ~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~  464 (574)
T PLN02191        385 AINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVS  464 (574)
T ss_pred             EECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECCCcccCCCC
Confidence            999999998999998776554445443221100 0000         01234677899999999999999985      5


Q ss_pred             CcCceeecCCCeEEEEeccCCCCccc-cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEE
Q 020366          219 TMQSWHLDGYDFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYL  297 (327)
Q Consensus       219 ~~HP~HLHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~  297 (327)
                      ..||||||||+||||++|.|.|+++. ...+|+.||++|||+.||++||++|||+|||||+|+|||||++|+.+||+++|
T Consensus       465 ~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~  544 (574)
T PLN02191        465 EIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVF  544 (574)
T ss_pred             CCCCEEeCCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEE
Confidence            78999999999999999999998632 24689999999999999999999999999999999999999999999999988


Q ss_pred             EEEcCcccccccCCCCCchhhccccCC
Q 020366          298 KVWNAVHSLANEYDIPSNILVCGKAVG  324 (327)
Q Consensus       298 ~v~~~~~~~~~~~~~P~~~~~C~~~~~  324 (327)
                      .  |..+.+   +++|++++.|+.+.+
T Consensus       545 ~--e~~~~~---~~~p~~~~~C~~~~~  566 (574)
T PLN02191        545 A--EGLNRI---GKIPDEALGCGLTKQ  566 (574)
T ss_pred             e--cChhhc---cCCCcchhhhhcccc
Confidence            4  444444   458899999987765

>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type

Probab=100.00  E-value=2.1e-59  Score=460.75  Aligned_cols=296  Identities=23%  Similarity=0.366  Sum_probs=212.2

Q ss_pred             CeeEEecCCCcEEEEEEeCCe-EEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCC-------CCceEEEEEecccCC
Q 020366            1 MFRISNVGLSTSFNFRIQGHT-MKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP-------PKDYYIVASTRFTKN   72 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~-l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~-------~~~y~ir~~~~~~~~   72 (327)
                      ||||||+|+.+.+.|+||||+ |+|||+||++++|++++.|.|++||||||||+++++       +++||||+.....++
T Consensus       209 RlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~~  288 (538)
T TIGR03390       209 RLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPK  288 (538)
T ss_pred             EEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCceEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCCC
Confidence            899999999999999999999 999999999999999999999999999999999975       378999998655444


Q ss_pred             CceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccc--cCC
Q 020366           73 VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPL--ING  150 (327)
Q Consensus        73 ~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~g  150 (327)
                      ...++|||+|.+.........|..|..........+.+  ..|.|......+.  + .....+++++.+...+..  .++
T Consensus       289 ~~~~~aiL~Y~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~l~pl~~~~~~~--~-~~~~~~d~~~~l~~~~~~~~~~g  363 (538)
T TIGR03390       289 VYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLE--YELEPLSEENNQD--F-PTLDEVTRRVVIDAHQNVDPLNG  363 (538)
T ss_pred             cceEEEEEEeCCCCCCCCCCCCCCCCCCccCcchhhhh--eeeEecCccccCC--C-CCCCcCceEEEEEccccccccCC
Confidence            56789999997653221111111111000000001111  1233332211000  0 001245777777665422  246


Q ss_pred             eEEEEEcCccCcC--CCCccccccccCC-CCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCC--------CC
Q 020366          151 KLRYAVNGISYVN--SDTPLKLADYFNI-PGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE--------KT  219 (327)
Q Consensus       151 ~~~~~iN~~~~~~--~~~P~l~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~--------~~  219 (327)
                      ..+|+|||++|..  +.+|+|...+.+. ......+.   .+...+....++++.++.|++|||+|+|..        ..
T Consensus       364 ~~~~~~N~~s~~~~~~~~P~L~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~  440 (538)
T TIGR03390       364 RVAWLQNGLSWTESVRQTPYLVDIYENGLPATPNYTA---ALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVD  440 (538)
T ss_pred             eEEEEECCcccCCCCCCCchHHHHhcCCCCcCCCccc---ccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCC
Confidence            6889999999985  7899987654221 00000000   000011223466788999999999999974        47


Q ss_pred             cCceeecCCCeEEEEeccCCCCccc-cccCCCCCCCceeeEEeC----------CCCEEEEEEEecCCeeeEEEeeehhh
Q 020366          220 MQSWHLDGYDFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVY----------PQSWTVILVSLDNQGMWNMRSAIWER  288 (327)
Q Consensus       220 ~HP~HLHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp----------~~g~~virf~adnpG~W~~HCHi~~h  288 (327)
                      .||||||||+||||++|.|.|++.. ...+|+.||++|||+.||          ++||++|||++||||+|+|||||.+|
T Consensus       441 ~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H  520 (538)
T TIGR03390       441 THPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQH  520 (538)
T ss_pred             CCCeeecCCcEEEEcccccccCCccChhhhccCCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhh
Confidence            8999999999999999999998543 235788899999999996          78999999999999999999999999


Q ss_pred             hccCceEEEEEEcCcc
Q 020366          289 QYLGQQFYLKVWNAVH  304 (327)
Q Consensus       289 ~~~Gm~~~~~v~~~~~  304 (327)
                      +.+||+++|.+.+.++
T Consensus       521 ~~~Gm~~~~~~~~~~~  536 (538)
T TIGR03390       521 MVMGMQTVWVFGDAED  536 (538)
T ss_pred             hhccceEEEEeCChHH
Confidence            9999999999876544

This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.

>TIGR01480 copper_res_A copper-resistance protein, CopA family

Probab=100.00  E-value=1.5e-42  Score=341.75  Aligned_cols=247  Identities=18%  Similarity=0.196  Sum_probs=170.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+.+.|+|+|+||+|+|||+||++|+|++++.|.|++||||||||++.+ .|.|+|++....+.  ....++|
T Consensus       271 RLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~~-~g~~~i~a~~~~~~--~~~~~~l  347 (587)
T TIGR01480       271 RLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPTG-DDAFTIFAQDSDRT--GYARGTL  347 (587)
T ss_pred             EEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecCC-CceEEEEEEecCCC--ceEEEEE
Confidence            89999999999999999999999999999999999999999999999999999874 57899999765332  3567788


Q ss_pred             EecCCCCCCCCCCCCCCC---Ccccc-c-----------c------ccc---------c--ccccc---cc---------
Q 020366           81 HYTNSHSPASGPLPTGPT---YEIHW-S-----------M------KQA---------R--TFRWN---LT---------  116 (327)
Q Consensus        81 ~y~~~~~~~~~~~p~~p~---~~~~~-~-----------~------~~~---------~--~~~~~---l~---------  116 (327)
                      ++.+.......+++..|.   .+... .           .      +..         .  ++..+   ..         
T Consensus       348 ~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (587)
T TIGR01480       348 AVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLNPL  427 (587)
T ss_pred             ecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcccccCCcc
Confidence            876542100011111110   01100 0           0      000         0  00000   00         


Q ss_pred             -------ccCCCCCCC--------CCCC----------CCCcCceEEEEEeccccccCCeEEEEEcCccCcCCCCccccc
Q 020366          117 -------ANAARPNPQ--------GSFH----------YGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLA  171 (327)
Q Consensus       117 -------~~~~~~~p~--------~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~  171 (327)
                             +......|.        ....          .....+++++.+....  ....+.|+|||..|.+ .      
T Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~g--~m~~~~wtiNG~~~~~-~------  498 (587)
T TIGR01480       428 VDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLTG--NMERFAWSFDGEAFGL-K------  498 (587)
T ss_pred             ccccccCcccccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEcC--CCceeEEEECCccCCC-C------
Confidence                   000000000        0000          0001345555554321  1234679999988752 0      


Q ss_pred             cccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCC
Q 020366          172 DYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLA  251 (327)
Q Consensus       172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~  251 (327)
                                                 ..+.++.|++|+|.|.|...+.||||||||.|+++..+ |.            
T Consensus       499 ---------------------------~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~-G~------------  538 (587)
T TIGR01480       499 ---------------------------TPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQ-GE------------  538 (587)
T ss_pred             ---------------------------CceEecCCCEEEEEEECCCCCCcceeEcCceeeeecCC-Cc------------
Confidence                                       11468999999999999999999999999999998654 42            


Q ss_pred             CCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          252 DTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       252 ~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .+.++||+.|+|++++.++|.+||||.|+||||+++|++.||+..++|
T Consensus       539 ~~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v  586 (587)
T TIGR01480       539 FQVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTV  586 (587)
T ss_pred             ccccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEe
Confidence            146789999999999999999999999999999999999999999987

This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export.

>PRK10965 multicopper oxidase; Provisional

Probab=100.00  E-value=6.1e-41  Score=327.72  Aligned_cols=231  Identities=18%  Similarity=0.238  Sum_probs=154.6

Q ss_pred             CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CC
Q 020366            1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NV   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~   73 (327)
                      ||||||+|+.+.|+|++ |||+|+|||+||+++ +|++++.|.|+|||||||+|++++ .++|++++......     ..
T Consensus       233 RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~  311 (523)
T PRK10965        233 RLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVKVSELPILMGERFEVLVDTSD-GKAFDLVTLPVSQMGMALAPF  311 (523)
T ss_pred             EEEEEeccCCceEEEEEcCCceEEEEEeCCCcccCccEeCeEEECccceEEEEEEcCC-CceEEEEEecccCcccccccC
Confidence            89999999999999998 899999999999986 899999999999999999999986 46799988643211     01


Q ss_pred             ceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccc--------
Q 020366           74 LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSA--------  145 (327)
Q Consensus        74 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------  145 (327)
                      .....++++.....+....+|..                  |.+.++.+.+.       ....|++.+....        
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~P~~------------------l~~~~~~~~~~-------~~~~r~~~l~~~~~~~~~~m~  366 (523)
T PRK10965        312 DKPLPVLRIQPLLISASGTLPDS------------------LASLPALPSLE-------GLTVRRLQLSMDPRLDMMGMQ  366 (523)
T ss_pred             CCceeEEEEeccCcCCCCcCChh------------------hccCCCCCccc-------ccceeEEEEeeccccchhhhh
Confidence            12345555543221111112210                  00000000000       0011122111000        


Q ss_pred             ------c---------------c--------cC-----Ce-----EEEEEcCccCcCCCCccccccccCCCCccccCCCC
Q 020366          146 ------P---------------L--------IN-----GK-----LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQ  186 (327)
Q Consensus       146 ------~---------------~--------~~-----g~-----~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~  186 (327)
                            +               .        ..     +.     ..|+|||++|... .                    
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~-~--------------------  425 (523)
T PRK10965        367 MLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDMN-K--------------------  425 (523)
T ss_pred             hccccccccccccccccccccccccccccccccccccccccccccccccCCCeECCCC-C--------------------
Confidence                  0               0        00     00     1257888877531 1                    


Q ss_pred             CCCCCCCCcceeeEEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCC
Q 020366          187 SVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQS  265 (327)
Q Consensus       187 ~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g  265 (327)
                                  ..+.++.|++++|.|.|.+. +.|||||||++|+||+++ |.       ......+.|||||.|++ +
T Consensus       426 ------------~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~-g~-------~~~~~~~~wkDTv~v~~-~  484 (523)
T PRK10965        426 ------------PMFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSEN-GK-------PPAAHRAGWKDTVRVEG-G  484 (523)
T ss_pred             ------------cceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEec-CC-------CCCccccccccEEEECC-c
Confidence                        11467999999999999885 689999999999999997 42       11223468999999988 6


Q ss_pred             EEEEEEEe----cCCeeeEEEeeehhhhccCceEEEEE
Q 020366          266 WTVILVSL----DNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       266 ~~virf~a----dnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .+.|++++    |++|.|||||||++|++.|||..|.|
T Consensus       485 ~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~~~V  522 (523)
T PRK10965        485 RSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLGFTV  522 (523)
T ss_pred             EEEEEEEecCCCCCCCCEEEEeCchhhhccCccceeEe
Confidence            66555443    57789999999999999999999987

>PRK10883 FtsI repressor; Provisional

Probab=100.00  E-value=1.8e-40  Score=321.59  Aligned_cols=224  Identities=15%  Similarity=0.150  Sum_probs=151.6

Q ss_pred             CeeEEecCCCcEEEEEE-eCCeEEEEEecCcc-ceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CC
Q 020366            1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSH-TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NV   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~-v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~   73 (327)
                      ||||||+|+.+.|.|+| |||+|+|||+||++ .+|+.+++|.|++||||||||++++ .+.+.+.+......     ..
T Consensus       230 RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~-~~~~~l~~~~~~~~~~~~~~~  308 (471)
T PRK10883        230 RLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITAGEAAGIVDRLRGF  308 (471)
T ss_pred             EEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECCCCeEEEEEECCC-CceEEEECCCccccccccccc
Confidence            89999999999999999 89999999999777 4899999999999999999999975 34566665321100     00


Q ss_pred             c------eeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccc
Q 020366           74 L------TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPL  147 (327)
Q Consensus        74 ~------~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  147 (327)
                      .      ....+++......     .+..+ .          .++..|.+..  ..+.      .....+++.+..    
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~-----~~~~~-~----------~~p~~l~~~~--~~~~------~~~~~~~~~l~~----  360 (471)
T PRK10883        309 FEPSSILVSTLVLTLRPTGL-----LPLVT-D----------NLPMRLLPDE--IMEG------SPIRSREISLGD----  360 (471)
T ss_pred             cCCccccccceeEEEEcccc-----ccCCC-C----------cCChhhcCCC--CCCC------CCcceEEEEecC----
Confidence            0      0111222221100     00000 0          0010111100  0000      111223443321    


Q ss_pred             cCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecC
Q 020366          148 INGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDG  227 (327)
Q Consensus       148 ~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG  227 (327)
                          ..|.|||++|.+.+.+                                 +.++.|++++|.|.|.  +.|||||||
T Consensus       361 ----~~~~INg~~~~~~~~~---------------------------------~~~~~g~~e~W~~~n~--~~HP~HlHg  401 (471)
T PRK10883        361 ----DLPGINGALWDMNRID---------------------------------VTAQQGTWERWTVRAD--MPQAFHIEG  401 (471)
T ss_pred             ----CcCccCCcccCCCcce---------------------------------eecCCCCEEEEEEECC--CCcCEeECC
Confidence                1478999998642111                                 3578999999999886  689999999


Q ss_pred             CCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe----eeEEEeeehhhhccCceEEEEEEcC
Q 020366          228 YDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG----MWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       228 ~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG----~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      +.||||+++...        ....+..|||||.|+  +.+.|++++|++|    .|||||||++|+++|||..|+|..+
T Consensus       402 ~~FqVl~~~G~~--------~~~~~~gwkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~~  470 (471)
T PRK10883        402 VMFLIRNVNGAM--------PFPEDRGWKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNPA  470 (471)
T ss_pred             ccEEEEEecCCC--------CCccccCcCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEecC
Confidence            999999996321        111224799999996  4699999999998    7999999999999999999998643

>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=5.6e-35  Score=283.63  Aligned_cols=237  Identities=19%  Similarity=0.174  Sum_probs=160.4

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||+|+++.+.+.+++.+++|+||++||.+++|+.++.+.|++||||||+|+.++ .+.|.+.+.....  .....+..
T Consensus       210 rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~~~~-~~~~~l~~~~~~~--~~~~~~~~  286 (451)
T COG2132         210 RLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMND-GGAVTLTALGEDM--PDTLKGFR  286 (451)
T ss_pred             EEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEEcCC-CCeEEEEeccccC--Cceeeeee
Confidence            89999999999999999999999999999999999999999999999999999986 5667777764111  11122222


Q ss_pred             EecCCCCCC---CCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEc
Q 020366           81 HYTNSHSPA---SGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN  157 (327)
Q Consensus        81 ~y~~~~~~~---~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN  157 (327)
                      .........   .......+..+.   .+..  ....+....  ..+.       ...+..+.+.    ...+...|.+|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~d~---~~~~--~~~~~~~~~--~~~~-------~~~~~~~~l~----~~~~~~~~~~n  348 (451)
T COG2132         287 APNPILTPSYPVLNGRVGAPTGDM---ADHA--PVGLLVTIL--VEPG-------PNRDTDFHLI----GGIGGYVWAIN  348 (451)
T ss_pred             ccccccccccccccccccCCCcch---hhcc--ccccchhhc--CCCc-------ccccccchhh----ccccccccccc
Confidence            111110000   000000010000   0000  000000000  0000       0011111111    11233568888


Q ss_pred             CccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEecc
Q 020366          158 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGS  237 (327)
Q Consensus       158 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~  237 (327)
                      ++.|.+.+                                 ..+.++.|++++|+|+|.+.+.|||||||+.|+|++.+ 
T Consensus       349 ~~~~~~~~---------------------------------~~~~~~~G~~~~~~i~n~~~~~HP~HlHg~~F~v~~~~-  394 (451)
T COG2132         349 GKAFDDNR---------------------------------VTLIAKAGTRERWVLTNDTPMPHPFHLHGHFFQVLSGD-  394 (451)
T ss_pred             CccCCCCc---------------------------------CceeecCCCEEEEEEECCCCCccCeEEcCceEEEEecC-
Confidence            88776311                                 12567899999999999999999999999999999997 


Q ss_pred             CCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          238 GQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       238 G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .        ......+.||||+.+.+++.++++|.+|+||.||||||+++|++.|||..+.|.
T Consensus       395 ~--------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HCH~l~H~~~Gm~~~~~v~  449 (451)
T COG2132         395 A--------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEHEDNGMMGQFGVV  449 (451)
T ss_pred             C--------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEeccchhHhhcCCeeEEEec
Confidence            1        112244799999999999999999999999999999999999999999999875

>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=100.00  E-value=4.4e-33  Score=228.23  Aligned_cols=108  Identities=31%  Similarity=0.485  Sum_probs=97.1

Q ss_pred             CcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe
Q 020366          194 SSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL  273 (327)
Q Consensus       194 ~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a  273 (327)
                      .+.++.++.++.|++|||+|+|.+...|||||||++|+|++++.+.++......+++.+|.||||+.|+++||++|||++
T Consensus        29 ~~~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~  108 (138)
T PF07731_consen   29 FFGNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA  108 (138)
T ss_dssp             SSSTTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE
T ss_pred             cCCCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe
Confidence            34467789999999999999999999999999999999999997776544455678899999999999999999999999


Q ss_pred             cCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366          274 DNQGMWNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       274 dnpG~W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      ||||.|+||||+++|++.|||+.++|..
T Consensus       109 ~~~G~w~~HCHi~~H~~~GM~~~~~v~~  136 (138)
T PF07731_consen  109 DNPGPWLFHCHILEHEDNGMMAVFVVGP  136 (138)
T ss_dssp             TSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred             ecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence            9999999999999999999999999853

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A ....

>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=99.88  E-value=9.2e-23  Score=171.01  Aligned_cols=84  Identities=40%  Similarity=0.584  Sum_probs=74.0

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc----CCCcee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT----KNVLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~----~~~~~~   76 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|++++.|.|++||||||||++++++|+|||++.....    ....++
T Consensus        71 rlRliNa~~~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~  150 (159)
T PF00394_consen   71 RLRLINAGASTSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNA  150 (159)
T ss_dssp             EEEEEEESSS-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTT
T ss_pred             EEEEEeccCCeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEE
Confidence            8999999999999999999999999999999999999999999999999999999878999999963211    234678


Q ss_pred             EEEEEecC
Q 020366           77 TAILHYTN   84 (327)
Q Consensus        77 ~ail~y~~   84 (327)
                      .|||+|++
T Consensus       151 ~aiL~Y~~  158 (159)
T PF00394_consen  151 LAILRYDG  158 (159)
T ss_dssp             EEEEEETT
T ss_pred             EEEEEECC
Confidence            99999986

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A ....

>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing

Probab=99.39  E-value=4.2e-13  Score=124.06  Aligned_cols=85  Identities=15%  Similarity=0.075  Sum_probs=72.5

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeE--eeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNI--YDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~--v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~a   78 (327)
                      ||||||++..+.+.|+++||.+++|+.||.+++|..  ++.+.|+|||||||+|++++ +|.|++++............|
T Consensus       213 RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~-pG~y~~~~~~~~~~~~~g~~~  291 (311)
T TIGR02376       213 RVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANPPNRDVETWFIPGGSAAAALYTFEQ-PGVYAYVDHNLIEAFEKGAAA  291 (311)
T ss_pred             EEEEEcCCCCCCCCCeEecCCceEEEECCcccCCCCCCcceEEECCCceEEEEEEeCC-CeEEEEECcHHHHHHhCCCEE
Confidence            899999999999999999999999999999998644  89999999999999999997 689999987543321234679


Q ss_pred             EEEecCCC
Q 020366           79 ILHYTNSH   86 (327)
Q Consensus        79 il~y~~~~   86 (327)
                      +|+|++..
T Consensus       292 ~i~~~g~~  299 (311)
T TIGR02376       292 QVKVEGAW  299 (311)
T ss_pred             EEEECCCC
Confidence            99998654

This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification.

>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing

Probab=99.25  E-value=3e-11  Score=111.79  Aligned_cols=82  Identities=16%  Similarity=0.164  Sum_probs=67.0

Q ss_pred             EEEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG  277 (327)
                      ++.++.|++|+|.+.|...  ..|++|+||+.    +.+ |.             +   .+..|+||++..++|.+++||
T Consensus        60 ~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~d-g~-------------~---~~~~I~PG~t~ty~F~~~~~G  118 (311)
T TIGR02376        60 LIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GAL-GG-------------A---ALTQVNPGETATLRFKATRPG  118 (311)
T ss_pred             eEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccC-CC-------------C---cceeECCCCeEEEEEEcCCCE
Confidence            3678999999999999854  68999999974    111 10             1   234599999999999999999


Q ss_pred             eeEEEee----ehhhhccCceEEEEEEcC
Q 020366          278 MWNMRSA----IWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       278 ~W~~HCH----i~~h~~~Gm~~~~~v~~~  302 (327)
                      .|+||||    +..|...||+..+.|..+
T Consensus       119 ty~YH~H~~~~~~~q~~~Gl~G~liV~~~  147 (311)
T TIGR02376       119 AFVYHCAPPGMVPWHVVSGMNGAIMVLPR  147 (311)
T ss_pred             EEEEEcCCCCchhHHhhcCcceEEEeecc
Confidence            9999999    567999999999998743

This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification.

>PLN02604 oxidoreductase

Probab=99.09  E-value=5.6e-10  Score=111.37  Aligned_cols=88  Identities=14%  Similarity=0.126  Sum_probs=69.8

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      ++++.|++|++.+.|.. ...|+||+||+..  .+.   .|.         +-.+......|+||+....+|+++++|.|
T Consensus        57 i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~--~~~---~~~---------DG~~~~tq~~i~pg~s~~y~f~~~~~Gt~  122 (566)
T PLN02604         57 ILAQQGDTVIVELKNSLLTENVAIHWHGIRQ--IGT---PWF---------DGTEGVTQCPILPGETFTYEFVVDRPGTY  122 (566)
T ss_pred             EEEECCCEEEEEEEeCCCCCCCCEEeCCCCC--CCC---ccc---------cCCCccccCccCCCCeEEEEEEcCCCEEE
Confidence            67899999999999986 5789999999952  111   010         00112244578999999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      +||||...|...||...+.|..+
T Consensus       123 wyH~H~~~q~~~Gl~G~liV~~~  145 (566)
T PLN02604        123 LYHAHYGMQREAGLYGSIRVSLP  145 (566)
T ss_pred             EEeeCcHHHHhCCCeEEEEEEec
Confidence            99999999999999999998754

>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=98.84  E-value=2e-08  Score=79.63  Aligned_cols=89  Identities=16%  Similarity=0.140  Sum_probs=66.1

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-Ce
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-QG  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-pG  277 (327)
                      +++.++.|+.|++.+.|.....+.+|.||...--     ..|.+..+  ..   +    .-.|+||+....+|.++. +|
T Consensus        26 PtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~-----~~~~DG~~--~~---~----~~~i~pG~~~~Y~~~~~~~~G   91 (117)
T PF07732_consen   26 PTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPP-----SPWMDGVP--GV---T----QCPIAPGESFTYEFTANQQAG   91 (117)
T ss_dssp             EEEEEETTEEEEEEEEEESSSGBSEEEETSBSTT-----GGGGSGGT--TT---S----GSSBSTTEEEEEEEEESSCSE
T ss_pred             CEEEEEcCCeeEEEEEeccccccccccceeeeee-----eeecCCcc--cc---c----ceeEEeecceeeeEeeecccc
Confidence            3578999999999999998888999999976311     00110000  00   0    113778999999999998 99


Q ss_pred             eeEEEeeehhhhccCceEEEEEEc
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      .+.||||...+..+||..++.|..
T Consensus        92 t~wYH~H~~~~~~~GL~G~~iV~~  115 (117)
T PF07732_consen   92 TYWYHSHVHGQQVMGLYGAIIVEP  115 (117)
T ss_dssp             EEEEEECSTTHHHTTEEEEEEEE-
T ss_pred             ceeEeeCCCchhcCcCEEEEEEcC
Confidence            999999998876699999998754

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A ....

>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=98.55  E-value=3.4e-07  Score=76.60  Aligned_cols=90  Identities=19%  Similarity=0.223  Sum_probs=75.2

Q ss_pred             eEEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-C
Q 020366          199 SVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-Q  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-p  276 (327)
                      .++.++.|++++|.|.|.+. ..+.|++.||+|+|++.+ |.          ...|...|++.|.+|+.+.|.++++. +
T Consensus        60 ~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~D-G~----------~v~p~~~~~l~l~~G~R~dvlv~~~~~~  128 (159)
T PF00394_consen   60 PVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAAD-GV----------PVEPYKVDTLVLAPGQRYDVLVTADQPP  128 (159)
T ss_dssp             GEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEET-TE----------EEEEEEESBEEE-TTEEEEEEEEECSCS
T ss_pred             ceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeec-cc----------cccccccceEEeeCCeEEEEEEEeCCCC
Confidence            45889999999999999876 479999999999999997 42          22388899999999999999999987 9


Q ss_pred             eeeEEEe----eehhhhccCceEEEEE
Q 020366          277 GMWNMRS----AIWERQYLGQQFYLKV  299 (327)
Q Consensus       277 G~W~~HC----Hi~~h~~~Gm~~~~~v  299 (327)
                      |.|.++|    +...+...++++++..
T Consensus       129 g~y~i~~~~~~~~~~~~~~~~~~aiL~  155 (159)
T PF00394_consen  129 GNYWIRASYQHDSINDPQNGNALAILR  155 (159)
T ss_dssp             SEEEEEEEESSSSSHSHGGGTTEEEEE
T ss_pred             CeEEEEEecccCCCccCCCcEEEEEEE
Confidence            9999999    5456778888888764

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A ....

>TIGR03388 ascorbase L-ascorbate oxidase, plant type

Probab=98.54  E-value=3.2e-07  Score=91.41  Aligned_cols=88  Identities=17%  Similarity=0.135  Sum_probs=67.8

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      ++++.|+.|+|.+.|.. ...+.+|+||.+.  .+.   .|...         .+.-..-.|+||+....+|.++++|.|
T Consensus        34 i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~--~~~---~~~DG---------~~~vtq~~I~PG~s~~y~f~~~~~Gt~   99 (541)
T TIGR03388        34 IRAQAGDTIVVELTNKLHTEGVVIHWHGIRQ--IGT---PWADG---------TAGVTQCAINPGETFIYNFVVDRPGTY   99 (541)
T ss_pred             EEEEcCCEEEEEEEECCCCCCccEEecCcCC--cCC---cccCC---------CCccccCCcCCCCEEEEEEEcCCCEEE
Confidence            67899999999999985 4679999999952  111   11000         011122357899999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||||...+...||...+.|..+
T Consensus       100 wyH~H~~~q~~~Gl~G~liV~~~  122 (541)
T TIGR03388       100 FYHGHYGMQRSAGLYGSLIVDVP  122 (541)
T ss_pred             EEEecchHHhhccceEEEEEecC
Confidence            99999999999999999998744

Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.

>TIGR03095 rusti_cyanin rusticyanin

Probab=98.20  E-value=1e-05  Score=66.64  Aligned_cols=87  Identities=9%  Similarity=0.006  Sum_probs=57.3

Q ss_pred             EEEecCCcEEEEEEEeCCC-CcCceeecCCCe--EEEEeccCCCCccccccCCCCCCCceeeEEeCC---C--CEEEEEE
Q 020366          200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDF--WVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP---Q--SWTVILV  271 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F--~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~---~--g~~virf  271 (327)
                      .+.++.|+.|++++.|.+. ..|.|-||.+.-  .....-.|.             |..-..-.+|+   +  +|..+.|
T Consensus        53 ~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~-------------~~~~~~~i~p~~~~g~~~~~~~tf  119 (148)
T TIGR03095        53 TIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGL-------------GFVAGTGFLPPPKSGKFGYTDFTY  119 (148)
T ss_pred             EEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCC-------------CccccCcccCCCCCCccceeEEEE
Confidence            3788999999999999865 567666654321  100000010             11111122222   1  2568889


Q ss_pred             EecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          272 SLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       272 ~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      +++.+|.+.||||+..|...||-..+.|
T Consensus       120 ~f~~aGtywyhC~~pgH~~~GM~G~iiV  147 (148)
T TIGR03095       120 HFSTAGTYWYLCTYPGHAENGMYGKIVV  147 (148)
T ss_pred             ECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence            9899999999999999999999998876

Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094).

>PLN02191 L-ascorbate oxidase

Probab=98.10  E-value=1.1e-05  Score=80.80  Aligned_cols=81  Identities=14%  Similarity=0.018  Sum_probs=66.4

Q ss_pred             EEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee------EEeCCCCEEEEEEE
Q 020366          200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT------AQVYPQSWTVILVS  272 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT------v~vp~~g~~virf~  272 (327)
                      +++++.|+.|++.+.|.-. ..+.+|.||.+..      +              ..|.|-      -.|+||+....+|.
T Consensus        55 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~------~--------------~~~~DGv~gvtq~pI~PG~s~~Y~f~  114 (574)
T PLN02191         55 TIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQK------G--------------SPWADGAAGVTQCAINPGETFTYKFT  114 (574)
T ss_pred             eEEEEcCCEEEEEEEECCCCCCccEECCCCCCC------C--------------CccccCCCccccCCcCCCCeEEEEEE
Confidence            3788999999999999854 6799999999721      1              011221      24889999999999


Q ss_pred             ecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          273 LDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       273 adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      ++.+|.+.||||...+...||...+.|.
T Consensus       115 ~~~~GT~wYHsH~~~q~~~Gl~G~liV~  142 (574)
T PLN02191        115 VEKPGTHFYHGHYGMQRSAGLYGSLIVD  142 (574)
T ss_pred             CCCCeEEEEeeCcHHHHhCCCEEEEEEc
Confidence            9999999999999989999999999985

>TIGR02656 cyanin_plasto plastocyanin

Probab=97.86  E-value=9.2e-05  Score=56.77  Aligned_cols=81  Identities=17%  Similarity=0.126  Sum_probs=57.8

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|+|+  |.+...|-+.++.-.+..     |..        .....+..+++.+.||+...+.|.+  ||.|
T Consensus        18 ~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~pG~t~~~tF~~--~G~y   80 (99)
T TIGR02656        18 KISIAAGDTVEWV--NNKGGPHNVVFDEDAVPA-----GVK--------ELAKSLSHKDLLNSPGESYEVTFST--PGTY   80 (99)
T ss_pred             EEEECCCCEEEEE--ECCCCCceEEECCCCCcc-----chh--------hhcccccccccccCCCCEEEEEeCC--CEEE
Confidence            4789999999876  767777877765432211     100        0011233467788899998887765  9999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||-.  |..+||...+.|
T Consensus        81 ~y~C~~--H~~aGM~G~I~V   98 (99)
T TIGR02656        81 TFYCEP--HRGAGMVGKITV   98 (99)
T ss_pred             EEEcCC--ccccCCEEEEEE
Confidence            999995  999999999876

Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts.

>TIGR01480 copper_res_A copper-resistance protein, CopA family

Probab=97.85  E-value=6.1e-05  Score=75.46  Aligned_cols=85  Identities=13%  Similarity=-0.023  Sum_probs=66.9

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|+.|+|.+.|.-...+-+|.||-.-  -..-.|.             |. .-.-.|+||+....+|.+..+|.+
T Consensus        77 ~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DGv-------------P~-vt~~~I~PG~s~~Y~f~~~~~GTy  140 (587)
T TIGR01480        77 LLRWREGDTVRLRVTNTLPEDTSIHWHGILL--PFQMDGV-------------PG-VSFAGIAPGETFTYRFPVRQSGTY  140 (587)
T ss_pred             eEEEECCCEEEEEEEcCCCCCceEEcCCCcC--CccccCC-------------Cc-ccccccCCCCeEEEEEECCCCeeE
Confidence            3788999999999999988889999999862  1111120             11 111247899999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .||||...+...||...+.|.
T Consensus       141 WYHsH~~~q~~~GL~G~lIV~  161 (587)
T TIGR01480       141 WYHSHSGFQEQAGLYGPLIID  161 (587)
T ss_pred             EEecCchhHhhccceEEEEEC
Confidence            999999888899999999885

This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export.

>TIGR03096 nitroso_cyanin nitrosocyanin

Probab=97.75  E-value=0.00016  Score=58.07  Aligned_cols=58  Identities=14%  Similarity=0.288  Sum_probs=49.3

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|+.|+|++.|.+...|.+-++++.+                           ...|++++...++|.++-||.+.
T Consensus        63 I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---------------------------s~~I~pGet~TitF~adKpG~Y~  115 (135)
T TIGR03096        63 LVVKKGTPVKVTVENKSPISEGFSIDAYGI---------------------------SEVIKAGETKTISFKADKAGAFT  115 (135)
T ss_pred             EEECCCCEEEEEEEeCCCCccceEECCCCc---------------------------ceEECCCCeEEEEEECCCCEEEE
Confidence            789999999999999998888776666421                           23577889999999999999999


Q ss_pred             EEeee
Q 020366          281 MRSAI  285 (327)
Q Consensus       281 ~HCHi  285 (327)
                      |||-+
T Consensus       116 y~C~~  120 (135)
T TIGR03096       116 IWCQL  120 (135)
T ss_pred             EeCCC
Confidence            99998

Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins.

>TIGR03389 laccase laccase, plant

Probab=97.72  E-value=0.00011  Score=73.38  Aligned_cols=89  Identities=13%  Similarity=0.079  Sum_probs=64.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~  278 (327)
                      .+.++.|++|++.+.|.-...+-+|.||...  .+.  . |.         +.++..---.|+||+...-+|++ +.+|.
T Consensus        35 ~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q--~~~--~-~~---------DGv~~vTq~pI~PG~s~~Y~f~~~~~~GT  100 (539)
T TIGR03389        35 TLYAREGDTVIVNVTNNVQYNVTIHWHGVRQ--LRN--G-WA---------DGPAYITQCPIQPGQSYVYNFTITGQRGT  100 (539)
T ss_pred             EEEEEcCCEEEEEEEeCCCCCeeEecCCCCC--CCC--C-CC---------CCCcccccCCcCCCCeEEEEEEecCCCee
Confidence            3788999999999999988889999999862  111  0 10         00111111147899999999998 69999


Q ss_pred             eEEEeeehhhhccCceEEEEEEcCc
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +.||||.. +...||...+.|..+.
T Consensus       101 ~WYHsH~~-~~~~Gl~G~lIV~~~~  124 (539)
T TIGR03389       101 LWWHAHIS-WLRATVYGAIVILPKP  124 (539)
T ss_pred             EEEecCch-hhhccceEEEEEcCCC
Confidence            99999984 3456888888876543

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.

>PLN02168 copper ion binding / pectinesterase

Probab=97.68  E-value=0.00018  Score=71.64  Aligned_cols=88  Identities=13%  Similarity=0.176  Sum_probs=67.4

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      ++++.|++|++.+.|.-....-+|.||.+.  ...+   |.         +..+. -.--|+||+...-+|++ |.+|.+
T Consensus        59 I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~--~~~~---~~---------DGv~g-tQcpI~PG~sftY~F~~~~q~GT~  123 (545)
T PLN02168         59 LNATANDVINVNIFNNLTEPFLMTWNGLQL--RKNS---WQ---------DGVRG-TNCPILPGTNWTYRFQVKDQIGSY  123 (545)
T ss_pred             EEEECCCEEEEEEEeCCCCCccEeeCCccC--CCCC---Cc---------CCCCC-CcCCCCCCCcEEEEEEeCCCCceE
Confidence            788999999999999987788899999762  1111   10         00111 12358899999999998 589999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .||||...+...||...+.|.++.
T Consensus       124 WYHsH~~~Q~~~GL~G~lII~~~~  147 (545)
T PLN02168        124 FYFPSLLLQKAAGGYGAIRIYNPE  147 (545)
T ss_pred             EEecChhhhhhCcceeEEEEcCCc
Confidence            999999888889999999887553

>PLN02835 oxidoreductase

Probab=97.67  E-value=0.0002  Score=71.24  Aligned_cols=87  Identities=14%  Similarity=0.111  Sum_probs=66.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      ++++.|++|++.+.|.-....-+|.||....--....|              .+- ----|+||+...-+|.+ |.+|.+
T Consensus        62 I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~~~~~~DG--------------v~~-tQ~pI~PG~sf~Y~F~~~~q~GT~  126 (539)
T PLN02835         62 LDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDG--------------VLG-TNCPIPPNSNYTYKFQTKDQIGTF  126 (539)
T ss_pred             EEEECCCEEEEEEEeCCCCCCcEEeCCcccCCCCCCCC--------------Ccc-CcCCCCCCCcEEEEEEECCCCEeE
Confidence            78899999999999998888899999987311000011              011 11247899999999986 689999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||||...+...||...+.|.++
T Consensus       127 WYHsH~~~q~~~Gl~G~lIV~~~  149 (539)
T PLN02835        127 TYFPSTLFHKAAGGFGAINVYER  149 (539)
T ss_pred             EEEeCccchhcCcccceeEEeCC
Confidence            99999988889999999998643

>PRK10965 multicopper oxidase; Provisional

Probab=97.50  E-value=0.00041  Score=68.86  Aligned_cols=85  Identities=11%  Similarity=0.103  Sum_probs=66.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-Cee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-QGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-pG~  278 (327)
                      +++++.|+.|++.+.|.-....-+|+||.+.-  +...|.             |    -..|+||+....+|.++. +|.
T Consensus        78 tIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~--~~~DG~-------------p----q~~I~PG~s~~Y~f~~~q~aGT  138 (523)
T PRK10965         78 AVRLQRGKAVTVDITNQLPEETTLHWHGLEVP--GEVDGG-------------P----QGIIAPGGKRTVTFTVDQPAAT  138 (523)
T ss_pred             eEEEECCCEEEEEEEECCCCCccEEcccccCC--CccCCC-------------C----CCCCCCCCEEEEEeccCCCCce
Confidence            37889999999999999888889999998731  111120             1    124778999999999986 599


Q ss_pred             eEEEeee----hhhhccCceEEEEEEcCc
Q 020366          279 WNMRSAI----WERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi----~~h~~~Gm~~~~~v~~~~  303 (327)
                      +-||||.    ..+...||...+.|.++.
T Consensus       139 ~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~  167 (523)
T PRK10965        139 CWFHPHQHGKTGRQVAMGLAGLVLIEDDE  167 (523)
T ss_pred             EEEecCCCCCcHHHHhCcCeEEEEEcCcc
Confidence            9999996    567788999999987654

>PLN00044 multi-copper oxidase-related protein; Provisional

Probab=97.44  E-value=0.00046  Score=69.19  Aligned_cols=87  Identities=10%  Similarity=-0.009  Sum_probs=68.3

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      ++++.|++|++.+.|.-....-+|.||.+..--....|              ++. ..--|+||+...-+|.+ |.+|.+
T Consensus        62 I~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~~t~w~DG--------------v~~-TQcPI~PG~sftY~F~~~dq~GT~  126 (596)
T PLN00044         62 LNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDG--------------VGG-TNCAIPAGWNWTYQFQVKDQVGSF  126 (596)
T ss_pred             EEEECCCEEEEEEEeCCCCCccEEECCccCCCCccccC--------------CCC-CcCCcCCCCcEEEEEEeCCCCcee
Confidence            67889999999999998778889999977322111112              111 22367899999999999 689999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||+|...+...||-.++.|..+
T Consensus       127 WYHsH~~~Q~~~Gl~GalII~~~  149 (596)
T PLN00044        127 FYAPSTALHRAAGGYGAITINNR  149 (596)
T ss_pred             EeeccchhhhhCcCeeEEEEcCc
Confidence            99999988889999999988654

>PRK10883 FtsI repressor; Provisional

Probab=97.43  E-value=0.0008  Score=66.04  Aligned_cols=85  Identities=14%  Similarity=0.102  Sum_probs=63.3

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~  278 (327)
                      .++++.|+.|++.+.|.-....-+|+||.+.-  +...|             .+.    ..|+||+....+|..+ .+|.
T Consensus        78 tir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~--~~~~~-------------g~~----~~I~PG~~~~y~f~~~~~aGT  138 (471)
T PRK10883         78 TIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVP--GPLMG-------------GPA----RMMSPNADWAPVLPIRQNAAT  138 (471)
T ss_pred             eEEEECCCEEEEEEEeCCCCCCceeECCccCC--CCCCC-------------Ccc----ccCCCCCeEEEEEecCCCcee
Confidence            37889999999999999888888999998621  11011             111    1378899888999876 4899


Q ss_pred             eEEEeeeh----hhhccCceEEEEEEcCc
Q 020366          279 WNMRSAIW----ERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi~----~h~~~Gm~~~~~v~~~~  303 (327)
                      +.||||..    .+...||...+.|.++.
T Consensus       139 ~WYH~H~~~~t~~qv~~GL~G~lII~d~~  167 (471)
T PRK10883        139 CWYHANTPNRMAQHVYNGLAGMWLVEDEV  167 (471)
T ss_pred             eEEccCCCCchhhhHhcCCeEEEEEeCCc
Confidence            99999962    24567999999887654

>PLN02792 oxidoreductase

Probab=97.42  E-value=0.00039  Score=69.09  Aligned_cols=87  Identities=11%  Similarity=0.129  Sum_probs=65.4

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      ++++.|+.|++.+.|.-....-+|.||.+..--....|              .+. -.--|+||+...-+|.+ |.+|.+
T Consensus        49 I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DG--------------v~~-tqcPI~PG~sftY~F~~~~q~GT~  113 (536)
T PLN02792         49 IRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDG--------------VYG-TTCPIPPGKNYTYDFQVKDQVGSY  113 (536)
T ss_pred             EEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCC--------------CCC-CcCccCCCCcEEEEEEeCCCccce
Confidence            78899999999999998788889999987311000111              111 12357899999999998 589999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||||...+...||...+.|.++
T Consensus       114 WYHsH~~~q~~~Gl~G~liI~~~  136 (536)
T PLN02792        114 FYFPSLAVQKAAGGYGSLRIYSL  136 (536)
T ss_pred             EEecCcchhhhcccccceEEeCC
Confidence            99999987777888888877643

>PLN02354 copper ion binding / oxidoreductase

Probab=97.37  E-value=0.00038  Score=69.48  Aligned_cols=87  Identities=13%  Similarity=0.021  Sum_probs=66.3

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      ++++.|++|++.+.|.-...--+|.||....--....|              ++. ----|+||+...-+|.+ |.+|.+
T Consensus        60 I~~~~GD~v~V~v~N~l~~~ttiHWHGi~q~~~~~~DG--------------v~~-TQcpI~PG~sf~Y~F~~~~q~GT~  124 (552)
T PLN02354         60 INSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDG--------------VPG-TNCPIPPGTNFTYHFQPKDQIGSY  124 (552)
T ss_pred             EEEeCCCEEEEEEEECCCCCcccccccccCCCCcccCC--------------CcC-CcCCCCCCCcEEEEEEeCCCCcce
Confidence            78899999999999987666679999977322111112              111 12358899999999998 689999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||||...+...||...+.|..+
T Consensus       125 WYHsH~~~Q~~~Gl~G~lII~~~  147 (552)
T PLN02354        125 FYYPSTGMHRAAGGFGGLRVNSR  147 (552)
T ss_pred             EEecCccceecCCccceEEEcCC
Confidence            99999988888899999988654

>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type

Probab=97.36  E-value=0.0023  Score=63.91  Aligned_cols=88  Identities=10%  Similarity=0.033  Sum_probs=61.1

Q ss_pred             EEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe--cCC
Q 020366          200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL--DNQ  276 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a--dnp  276 (327)
                      .+++..|+.|++.+.|.-. ...-+|.||....--....|.              +..-.--|+||+...-+|.+  +.+
T Consensus        40 ~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGv--------------p~vTQcpI~PG~sf~Y~f~~~~~q~  105 (538)
T TIGR03390        40 EIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGT--------------PLASQWPIPPGHFFDYEIKPEPGDA  105 (538)
T ss_pred             eEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCC--------------cccccCCCCCCCcEEEEEEecCCCC
Confidence            3788999999999999853 678899999874221111120              00011147899999999987  479


Q ss_pred             eeeEEEeeehhhhccCceEEEEEEcC
Q 020366          277 GMWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       277 G~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      |.+.||||..... .||...+.|.++
T Consensus       106 GT~WYHsH~~~Q~-~~l~G~lIV~~~  130 (538)
T TIGR03390       106 GSYFYHSHVGFQA-VTAFGPLIVEDC  130 (538)
T ss_pred             eeeEEecCCchhh-hcceeEEEEccC
Confidence            9999999985543 467777777543

This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized.

>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D

Probab=97.29  E-value=0.0013  Score=50.79  Aligned_cols=62  Identities=10%  Similarity=0.184  Sum_probs=43.1

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|+.|.+++.|.+...|-|.+-+.                          ..+ ..|++|+...+.|.++.||.+
T Consensus        36 ~i~v~~G~~v~l~~~N~~~~~h~~~i~~~--------------------------~~~-~~l~~g~~~~~~f~~~~~G~y   88 (104)
T PF13473_consen   36 TITVKAGQPVTLTFTNNDSRPHEFVIPDL--------------------------GIS-KVLPPGETATVTFTPLKPGEY   88 (104)
T ss_dssp             EEEEETTCEEEEEEEE-SSS-EEEEEGGG--------------------------TEE-EEE-TT-EEEEEEEE-S-EEE
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEECCC--------------------------ceE-EEECCCCEEEEEEcCCCCEEE
Confidence            47899999999999999887665555441                          122 577888999999999999999


Q ss_pred             EEEeeehhhhc
Q 020366          280 NMRSAIWERQY  290 (327)
Q Consensus       280 ~~HCHi~~h~~  290 (327)
                      -|+|-+  |..
T Consensus        89 ~~~C~~--~~~   97 (104)
T PF13473_consen   89 EFYCTM--HPN   97 (104)
T ss_dssp             EEB-SS--S-T
T ss_pred             EEEcCC--CCc
Confidence            999998  665

>PLN02991 oxidoreductase

Probab=97.00  E-value=0.0022  Score=63.83  Aligned_cols=87  Identities=11%  Similarity=0.074  Sum_probs=65.1

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~W  279 (327)
                      +.+..|+.|++.+.|.-...--+|.||....=-....|.             |.  ----|+||+..+-+|.+ +.+|.+
T Consensus        61 I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~~~~~~DGv-------------~~--tQcpI~PG~sftY~F~~~~q~GT~  125 (543)
T PLN02991         61 IISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGV-------------YG--TTCPIPPGKNYTYALQVKDQIGSF  125 (543)
T ss_pred             EEEECCCEEEEEecCCCCCCccEEECCcccCCCccccCC-------------CC--CCCccCCCCcEEEEEEeCCCCcce
Confidence            788999999999999977777899999873110000110             11  12357899999999999 589999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||+|...+...|+...+.|.++
T Consensus       126 WYHsH~~~q~~~Gl~G~lIV~~~  148 (543)
T PLN02991        126 YYFPSLGFHKAAGGFGAIRISSR  148 (543)
T ss_pred             EEecCcchhhhCCCeeeEEEeCC
Confidence            99999977777788888887654

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.91  E-value=0.0053  Score=61.28  Aligned_cols=74  Identities=14%  Similarity=0.179  Sum_probs=55.7

Q ss_pred             EEEecCCcEEEEEEEeCC---CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC
Q 020366          200 VMQVNLHEYIEVVFQNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ  276 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~---~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp  276 (327)
                      -++++.|+.|.|.+.|.+   +..|-|.+-++...                           +.+.||....+.|+++.|
T Consensus       556 ~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI~---------------------------~dv~PG~t~svtF~adkP  608 (635)
T PRK02888        556 EFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGVN---------------------------MEVAPQATASVTFTADKP  608 (635)
T ss_pred             eEEecCCCEEEEEEEeCCcccccccceeecccCcc---------------------------EEEcCCceEEEEEEcCCC
Confidence            467899999999999974   45666666443311                           245578889999999999


Q ss_pred             eeeEEEeeehhh-hccCceEEEEEE
Q 020366          277 GMWNMRSAIWER-QYLGQQFYLKVW  300 (327)
Q Consensus       277 G~W~~HCHi~~h-~~~Gm~~~~~v~  300 (327)
                      |.|.+||...-+ .|.+|...+.|.
T Consensus       609 Gvy~~~CtefCGa~H~~M~G~~iVe  633 (635)
T PRK02888        609 GVYWYYCTWFCHALHMEMRGRMLVE  633 (635)
T ss_pred             EEEEEECCcccccCcccceEEEEEE
Confidence            999999987443 366888888774

>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ]

Probab=96.65  E-value=0.027  Score=42.98  Aligned_cols=81  Identities=9%  Similarity=0.004  Sum_probs=54.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc-ccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE-KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~-~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      .+.++.|++|.|+..  +...|.+.+=-        +  .+... .....    +..-.+..+.+|....+.|.  .||.
T Consensus        18 ~i~V~~G~tV~~~n~--~~~~Hnv~~~~--------~--~~~~~~~~~~~----~~~~~~~~~~~G~~~~~tF~--~~G~   79 (99)
T PF00127_consen   18 EITVKAGDTVTFVNN--DSMPHNVVFVA--------D--GMPAGADSDYV----PPGDSSPLLAPGETYSVTFT--KPGT   79 (99)
T ss_dssp             EEEEETTEEEEEEEE--SSSSBEEEEET--------T--SSHTTGGHCHH----STTCEEEEBSTTEEEEEEEE--SSEE
T ss_pred             EEEECCCCEEEEEEC--CCCCceEEEec--------c--ccccccccccc----CccccceecCCCCEEEEEeC--CCeE
Confidence            478999999988755  55666654422        1  11000 00000    11116667888888888876  9999


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      +.|+|-.  |..+||-..++|.
T Consensus        80 y~y~C~P--H~~~GM~G~i~V~   99 (99)
T PF00127_consen   80 YEYYCTP--HYEAGMVGTIIVE   99 (99)
T ss_dssp             EEEEETT--TGGTTSEEEEEEE
T ss_pred             EEEEcCC--CcccCCEEEEEEC
Confidence            9999994  9999999999873

The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A ....

>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties

Probab=96.58  E-value=0.013  Score=47.23  Aligned_cols=65  Identities=17%  Similarity=0.247  Sum_probs=55.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-----------eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-----------IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-----------~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      ||+|+|.+.. ..-|+|-||.+.|++.++...           +|...|.+.|.+|++..+.++++ .+|.|-+....
T Consensus        45 ~~~l~N~~~~-~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~-~~G~w~~HCHi  120 (138)
T PF07731_consen   45 EIVLQNNGSM-PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRAD-NPGPWLFHCHI  120 (138)
T ss_dssp             EEEEEECTTS-SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEET-STEEEEEEESS
T ss_pred             EEEEECCCCC-ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEee-cceEEEEEEch
Confidence            5789997655 889999999999999999884           58889999999999999999998 57877666553

Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A ....

>PRK02710 plastocyanin; Provisional

Probab=96.48  E-value=0.02  Score=45.31  Aligned_cols=70  Identities=14%  Similarity=0.101  Sum_probs=49.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|++|+|+  |.+...|-+.+.|..         .+             ..+| ..+.+|+...+.|..  ||.+-
T Consensus        49 i~v~~Gd~V~~~--N~~~~~H~v~~~~~~---------~~-------------~~~~-~~~~pg~t~~~tF~~--~G~y~  101 (119)
T PRK02710         49 LTIKAGDTVKWV--NNKLAPHNAVFDGAK---------EL-------------SHKD-LAFAPGESWEETFSE--AGTYT  101 (119)
T ss_pred             EEEcCCCEEEEE--ECCCCCceEEecCCc---------cc-------------cccc-cccCCCCEEEEEecC--CEEEE
Confidence            688999998875  767778887654321         00             0111 345677777777765  99999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |+|=.  |...||-..+.|
T Consensus       102 y~C~~--H~~~gM~G~I~V  118 (119)
T PRK02710        102 YYCEP--HRGAGMVGKITV  118 (119)
T ss_pred             EEcCC--CccCCcEEEEEE
Confidence            99986  988999998887

>TIGR02375 pseudoazurin pseudoazurin

Probab=96.30  E-value=0.025  Score=44.54  Aligned_cols=40  Identities=13%  Similarity=0.194  Sum_probs=31.8

Q ss_pred             CCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccc
Q 020366          263 PQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSL  306 (327)
Q Consensus       263 ~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~  306 (327)
                      +++...+.|  +.||.+-|+|=.  |..+||-..++|+++...+
T Consensus        54 ~g~~~~~tF--~~~G~Y~Y~C~p--H~~~GM~G~V~Vg~~~~n~   93 (116)
T TIGR02375        54 INEEYTVTV--TEEGVYGVKCTP--HYGMGMVALIQVGDPPANL   93 (116)
T ss_pred             CCCEEEEEe--CCCEEEEEEcCC--CccCCCEEEEEECCCCcCH
Confidence            455555444  789999999998  9999999999998864443

Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species.

>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.45  E-value=0.093  Score=52.47  Aligned_cols=88  Identities=15%  Similarity=0.017  Sum_probs=66.5

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~W  279 (327)
                      +.+..|+.|.+.+.|.....=-+|.||-+..=-....|.        +-...       -|+||+..+=+|.++ ..|.+
T Consensus        61 I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~DG~--------~~TqC-------PI~Pg~~~tY~F~v~~q~GT~  125 (563)
T KOG1263|consen   61 INAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQDGV--------YITQC-------PIQPGENFTYRFTVKDQIGTL  125 (563)
T ss_pred             EEEEeCCEEEEEEEeCCCCceEEEeccccccCCccccCC--------ccccC-------CcCCCCeEEEEEEeCCcceeE
Confidence            678899999999999977667799999874322222221        11111       357899999999986 99999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +||-|...+-..|+-.+|.|..+.
T Consensus       126 ~yh~h~~~~Ra~G~~G~liI~~~~  149 (563)
T KOG1263|consen  126 WYHSHVSWQRATGVFGALIINPRP  149 (563)
T ss_pred             EEeeccccccccCceeEEEEcCCc
Confidence            999999888899888888876543

>TIGR02657 amicyanin amicyanin

Probab=94.92  E-value=0.22  Score=36.58  Aligned_cols=71  Identities=11%  Similarity=0.097  Sum_probs=44.5

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.+..|++|.|  .|.+...|-.+.+...+       +..+             +. ...+.++....  |..+.||.+
T Consensus        12 ~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~~-------------~~-~~~~~~g~~~~--~tf~~~G~y   66 (83)
T TIGR02657        12 ELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEAA-------------LK-GPMMKKEQAYS--LTFTEAGTY   66 (83)
T ss_pred             EEEECCCCEEEE--EECCCCCccEEecCCCC-------cccc-------------cc-ccccCCCCEEE--EECCCCEEE
Confidence            378899999987  47777888887654221       1100             01 11233444444  566889999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||=+  |-  .|-..+.|
T Consensus        67 ~y~C~~--Hp--~M~G~v~V   82 (83)
T TIGR02657        67 DYHCTP--HP--FMRGKVVV   82 (83)
T ss_pred             EEEcCC--CC--CCeEEEEE
Confidence            999998  65  37666655

Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc.

>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=94.12  E-value=0.19  Score=49.19  Aligned_cols=86  Identities=16%  Similarity=0.090  Sum_probs=60.7

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|++|++.+.|.-...=-+|.||  +.+=....|.              .-.....+.++.+....|..+-||...
T Consensus        66 i~~~~Gd~v~l~~~N~l~~~t~vh~HG--~~~p~~~dG~--------------~~~~~~~~~~~~~~~y~f~~~~~gT~w  129 (451)
T COG2132          66 IRVKKGDTVTLDLTNRLLVDTSVHWHG--LPVPGEMDGV--------------PPLTQIPPGPGETPTYTFTQDVPGTYW  129 (451)
T ss_pred             EEEecCCEEEEEEEeCCCCCceEEEcC--cccCccccCC--------------CcccccCCCCCCcEEEeecCCCCcceE
Confidence            688999999999999854445699999  3332221220              112334455677788999999999777


Q ss_pred             EEeeehhhhccCceEEEEEEcC
Q 020366          281 MRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      ||-|-.....+||..++.|...
T Consensus       130 yh~H~~~Q~~~Gl~G~~II~~~  151 (451)
T COG2132         130 YHPHTHGQVYDGLAGALIIEDE  151 (451)
T ss_pred             eccCCCchhhcccceeEEEeCC
Confidence            8888755677888888887644

>TIGR03102 halo_cynanin halocyanin domain

Probab=94.00  E-value=0.62  Score=36.60  Aligned_cols=72  Identities=11%  Similarity=0.054  Sum_probs=46.6

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|.|+-++ +...|-..         +.+.+.|+..              .....+++...+.|  +.||.+
T Consensus        43 ~ltV~~GdTVtw~~~~-d~~~HnV~---------s~~~~~f~s~--------------~~~~~~G~t~s~Tf--~~~G~Y   96 (115)
T TIGR03102        43 AIRVDPGTTVVWEWTG-EGGGHNVV---------SDGDGDLDES--------------ERVSEEGTTYEHTF--EEPGIY   96 (115)
T ss_pred             EEEECCCCEEEEEECC-CCCCEEEE---------ECCCCCcccc--------------ccccCCCCEEEEEe--cCCcEE
Confidence            3689999999987433 23444432         2222333211              11223455555555  789999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|+|=.  |..+||-..++|
T Consensus        97 ~Y~C~p--H~~~gM~G~I~V  114 (115)
T TIGR03102        97 LYVCVP--HEALGMKGAVVV  114 (115)
T ss_pred             EEEccC--CCCCCCEEEEEE
Confidence            999998  999999999987

Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin.

>TIGR02866 CoxB cytochrome c oxidase, subunit II

Probab=93.97  E-value=0.37  Score=41.79  Aligned_cols=76  Identities=16%  Similarity=0.224  Sum_probs=54.6

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|++.+++.+-. |       .|+|-+-+ +                .+|   +-||....+.|.++.||.
T Consensus       117 ~~l~vp~g~~v~~~~ts~DV~-H-------sf~ip~~~-~----------------k~d---a~PG~~~~~~~~~~~~G~  168 (201)
T TIGR02866       117 NELVVPAGTPVRLQVTSKDVI-H-------SFWVPELG-G----------------KID---AIPGQYNALWFNADEPGV  168 (201)
T ss_pred             CEEEEEcCCEEEEEEEeCchh-h-------cccccccC-c----------------eEE---ecCCcEEEEEEEeCCCEE
Confidence            347899999999999987643 3       55553322 1                233   346777889999999999


Q ss_pred             eEEEeeehhh-hccCceEEEEEEcC
Q 020366          279 WNMRSAIWER-QYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~h-~~~Gm~~~~~v~~~  302 (327)
                      +...|.-.-. .|..|...+.|.++
T Consensus       169 y~~~c~e~cG~~h~~M~~~v~v~~~  193 (201)
T TIGR02866       169 YYGYCAELCGAGHSLMLFKVVVVER  193 (201)
T ss_pred             EEEEehhhCCcCccCCeEEEEEECH
Confidence            9999987442 36678888887654

Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions.

>PF14344 DUF4397: Domain of unknown function (DUF4397)

Probab=93.44  E-value=1.5  Score=34.35  Aligned_cols=47  Identities=19%  Similarity=0.192  Sum_probs=27.5

Q ss_pred             CeeEEecCC-CcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEE
Q 020366            1 MFRISNVGL-STSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVT   53 (327)
Q Consensus         1 RlRliNa~~-~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~   53 (327)
                      ++|+||++. ...+.+.+||-.   +..+=.|  ....+.+.+.+|. |.|-|+
T Consensus         3 ~Vr~~hasp~~~~vdv~~dg~~---~~~~v~y--~~~s~Y~~v~~G~-~~i~v~   50 (122)
T PF14344_consen    3 RVRFIHASPDAPAVDVYVDGTK---VFSNVAY--GQASDYLPVPPGT-YTIEVT   50 (122)
T ss_pred             EEEEEEcCCCCccEEEEECCEE---EEccCCC--CcccCceEECCce-EEEEEE
Confidence            589999998 578888887755   1111111  1123455666665 555554

>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism]

Probab=93.40  E-value=0.3  Score=40.02  Aligned_cols=92  Identities=13%  Similarity=0.092  Sum_probs=65.3

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|++++.++.|....-|=|-+=   ++...-  +.+....  ...-..---..++.|.||....|-+.+.++|.+-
T Consensus        65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~--~~~~~~~--~~~Dme~d~~~~v~L~PG~s~elvv~ft~~g~ye  137 (158)
T COG4454          65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNL--EHVTHMI--LADDMEHDDPNTVTLAPGKSGELVVVFTGAGKYE  137 (158)
T ss_pred             ccccCCcEEeeeecCcccceEEEecc---Cccccc--hhHHHhh--hCCccccCCcceeEeCCCCcEEEEEEecCCccEE
Confidence            57889999999999998877765544   111111  1111000  0000001234688999999999999999999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |-|-|-.|-+.||-.-++|
T Consensus       138 ~~C~iPGHy~AGM~g~itV  156 (158)
T COG4454         138 FACNIPGHYEAGMVGEITV  156 (158)
T ss_pred             EEecCCCcccCCcEEEEEe
Confidence            9999999999999998887

>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o

Probab=93.21  E-value=1.4  Score=34.79  Aligned_cols=73  Identities=8%  Similarity=0.059  Sum_probs=51.0

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|.+.+++. +..|.|.+-+...++                           .+-||....+.|.++.||.
T Consensus        46 ~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~k~---------------------------d~~PG~~~~~~~~~~~~G~   97 (120)
T PF00116_consen   46 NELVLPAGQPVRFHLTSE-DVIHSFWIPELGIKM---------------------------DAIPGRTNSVTFTPDKPGT   97 (120)
T ss_dssp             SEEEEETTSEEEEEEEES-SS-EEEEETTCTEEE---------------------------EEBTTCEEEEEEEESSSEE
T ss_pred             ceecccccceEeEEEEcC-CccccccccccCccc---------------------------ccccccceeeeeeeccCCc
Confidence            457899999999999985 455766665544332                           2345677788999999999


Q ss_pred             eEEEeeehh-hhccCceEEEEE
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKV  299 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v  299 (327)
                      +-..|...= .-|..|-..+.|
T Consensus        98 y~~~C~e~CG~gH~~M~~~v~V  119 (120)
T PF00116_consen   98 YYGQCAEYCGAGHSFMPGKVIV  119 (120)
T ss_dssp             EEEEE-SSSSTTGGG-EEEEEE
T ss_pred             EEEcCccccCcCcCCCeEEEEE
Confidence            999999754 335557776665

; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A ....

>COG3794 PetE Plastocyanin [Energy production and conversion]

Probab=91.38  E-value=1.5  Score=35.01  Aligned_cols=72  Identities=11%  Similarity=-0.013  Sum_probs=44.6

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|++|+|+  |.+...|-.+.=+-.         .             |..-+++..-.+.....-|  +-||.+.
T Consensus        56 v~v~pGDTVtw~--~~d~~~Hnv~~~~~~---------~-------------~~g~~~~~~~~~~s~~~Tf--e~~G~Y~  109 (128)
T COG3794          56 VTVKPGDTVTWV--NTDSVGHNVTAVGGM---------D-------------PEGSGTLKAGINESFTHTF--ETPGEYT  109 (128)
T ss_pred             EEECCCCEEEEE--ECCCCCceEEEeCCC---------C-------------cccccccccCCCcceEEEe--cccceEE
Confidence            678999999987  555556654322211         1             1111222222234444444  4499999


Q ss_pred             EEeeehhhhccCceEEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |.|-.  |.-+||-..+.|.
T Consensus       110 Y~C~P--H~~~gM~G~IvV~  127 (128)
T COG3794         110 YYCTP--HPGMGMKGKIVVG  127 (128)
T ss_pred             EEecc--CCCCCcEEEEEeC
Confidence            99999  9999999988875

>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]

Probab=87.88  E-value=3.1  Score=37.31  Aligned_cols=78  Identities=13%  Similarity=0.187  Sum_probs=54.5

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +-+.++.|+.|++.++..|-+        |.|||-+-| +                .+|   +-||-...+.+.++.||.
T Consensus       137 n~l~lPv~~~V~f~ltS~DVi--------HsF~IP~l~-~----------------k~d---~iPG~~~~~~~~~~~~G~  188 (247)
T COG1622         137 NELVLPVGRPVRFKLTSADVI--------HSFWIPQLG-G----------------KID---AIPGMTTELWLTANKPGT  188 (247)
T ss_pred             ceEEEeCCCeEEEEEEechhc--------eeEEecCCC-c----------------eee---ecCCceEEEEEecCCCeE
Confidence            347899999999999887543        466775544 1                122   234566788899999999


Q ss_pred             eEEEeeehhhh-ccCceEEEEEEcCcc
Q 020366          279 WNMRSAIWERQ-YLGQQFYLKVWNAVH  304 (327)
Q Consensus       279 W~~HCHi~~h~-~~Gm~~~~~v~~~~~  304 (327)
                      +-.+|+..-.. |..|-..+.|..+++
T Consensus       189 Y~g~Cae~CG~gH~~M~~~v~vvs~~~  215 (247)
T COG1622         189 YRGICAEYCGPGHSFMRFKVIVVSQED  215 (247)
T ss_pred             EEEEcHhhcCCCcccceEEEEEEcHHH
Confidence            99999986633 556777777665433

>TIGR01433 CyoA cytochrome o ubiquinol oxidase subunit II

Probab=84.29  E-value=4  Score=36.06  Aligned_cols=75  Identities=13%  Similarity=0.171  Sum_probs=54.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      -+.++.|+.|++.++..|-.        |+|||-+-+                 .++|.+   ||-...+.|.+|.||.+
T Consensus       140 el~lP~g~pV~~~ltS~DVi--------HSF~VP~l~-----------------~K~Dai---PG~~n~~~~~~~~~G~y  191 (226)
T TIGR01433       140 EIAFPVNTPINFKITSNSVM--------NSFFIPQLG-----------------SQIYAM---AGMQTKLHLIANEPGVY  191 (226)
T ss_pred             eEEEECCCEEEEEEEECchh--------hhhhhhhcC-----------------CeeecC---CCceEEEEEEeCCCEEE
Confidence            36889999999999987644        467775543                 234544   56667888999999999


Q ss_pred             EEEeeehhhh-ccCceEEEEEEcC
Q 020366          280 NMRSAIWERQ-YLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~-~~Gm~~~~~v~~~  302 (327)
                      .-.|--.-.. |..|...+.+..+
T Consensus       192 ~g~CaE~CG~~Ha~M~~~V~v~~~  215 (226)
T TIGR01433       192 DGISANYSGPGFSGMKFKAIATDR  215 (226)
T ss_pred             EEEchhhcCcCccCCeEEEEEECH
Confidence            9999864433 5667777776554

This enzyme catalyzes the oxidation of ubiquinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. Subunit II is responsible for binding and oxidation of the ubiquinone substrate. This sequence is closely related to QoxA, which oxidizes quinol in gram positive bacteria but which is in complex with subunits which utilize cytochromes a in the reduction of molecular oxygen. Slightly more distantly related is subunit II of cytochrome c oxidase which uses cyt. c as the oxidant.

>MTH00140 COX2 cytochrome c oxidase subunit II; Provisional

Probab=83.34  E-value=7.1  Score=34.54  Aligned_cols=76  Identities=7%  Similarity=0.011  Sum_probs=53.7

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|++.+++.|-.        |.|+|-+-|                 ...|.   -||....+.|.++.||.
T Consensus       140 n~l~lP~~~~v~~~~ts~DVi--------Hsf~ip~~~-----------------~k~d~---~Pg~~~~~~~~~~~~g~  191 (228)
T MTH00140        140 NRLVLPYSVDTRVLVTSADVI--------HSWTVPSLG-----------------VKVDA---IPGRLNQLSFEPKRPGV  191 (228)
T ss_pred             CeEEEeeCcEEEEEEEcCccc--------cceeccccC-----------------ceeEC---CCCcceeEEEEeCCCEE
Confidence            457899999999999997644        456664333                 11232   25666778889999999


Q ss_pred             eEEEeeehhhh-ccCceEEEEEEcC
Q 020366          279 WNMRSAIWERQ-YLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~h~-~~Gm~~~~~v~~~  302 (327)
                      +...|.-.-.. |..|-..++|..+
T Consensus       192 y~~~C~e~CG~~H~~M~~~v~v~~~  216 (228)
T MTH00140        192 FYGQCSEICGANHSFMPIVVEAVPL  216 (228)
T ss_pred             EEEECccccCcCcCCCeEEEEEECH
Confidence            99999875533 6668777777654

>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo

Probab=81.04  E-value=15  Score=26.79  Aligned_cols=63  Identities=16%  Similarity=0.295  Sum_probs=26.4

Q ss_pred             eeEEecCCCcEEEEEEe-CCe--EEEEEecCcccee--------eEeeEEEEcCCceEEEEEEeCCC---CCceEEEE
Q 020366            2 FRISNVGLSTSFNFRIQ-GHT--MKLVEVEGSHTIQ--------NIYDSLDVHVGQSVSVLVTLNQP---PKDYYIVA   65 (327)
Q Consensus         2 lRliNa~~~~~~~~sid-gh~--l~VIa~DG~~v~P--------~~v~~l~l~~GqRydvlv~~~~~---~~~y~ir~   65 (327)
                      |++.|.+. ..+.|.+. |++  +.|.-.+|..|--        +......|.|||...+-.+.+..   +|.|.+.+
T Consensus         6 l~v~N~s~-~~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a   82 (82)
T PF12690_consen    6 LTVTNNSD-EPVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLEA   82 (82)
T ss_dssp             EEEEE-SS-S-EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred             EEEEeCCC-CeEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence            55666663 34455552 443  3333335554421        12456666666666666666542   45666543

It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
1aoz_A	552	Refined Crystal Structure Of Ascorbate Oxidase At 1		5e-33
1hfu_A	503	Type-2 Cu-Depleted Laccase From Coprinus Cinereus A		4e-06
1a65_A	504	Type-2 Cu-depleted Laccase From Coprinus Cinereus L		4e-06
1zpu_A	534	Crystal Structure Of Fet3p, A Multicopper Oxidase T		1e-05
1v10_A	521	Structure Of Rigidoporus Lignosus Laccase From Hemi		4e-05
1kya_A	499	Active Laccase From Trametes Versicolor Complexed W		1e-04
3div_A	499	Crystal Structure Of Laccase From Cerrena Maxima At		2e-04
3t6v_A	495	Crystal Structure Of Laccase From Steccherinum Ochr		3e-04
1gyc_A	499	Crystal Structure Determination At Room Temperature		3e-04
3sqr_A	580	Crystal Structure Of Laccase From Botrytis Aclada A		5e-04
3v9e_A	580	Structure Of The L513m Mutant Of The Laccase From B		6e-04

>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552

Iteration: 1
 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 39/340 (11%)
Query: 3   RISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKD 60
           RI++     + NF I  H + +VE +G++ +Q  Y S +D++ G+S SVL+T +Q P ++
Sbjct: 217 RIASTTALAALNFAIGNHQLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSEN 275
Query: 61  YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y++   TR     T   LT    L  + S  P S P P  P ++      +++ F + +T
Sbjct: 276 YWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRIT 331
Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
           A    P P   F+       R I L N+  +ING +++A+N +S     TP   A  +N+
Sbjct: 332 AAMGSPKPPVKFN-------RRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL 384
Query: 177 ---------PGIFSVN-SIQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
                    P +F  +  I + P+   + +   V Q  + E ++V+ QN      N    
Sbjct: 385 LHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSET 444
Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             WHL G+DFWV+GYG G+++AE+  + NL +   R+T  ++P  WT I    DN G+W 
Sbjct: 445 HPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 504
Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCG 320
               I    ++G          V  +     IP+  L CG
Sbjct: 505 FHCHIEPHLHMGMGVVFA--EGVEKVGR---IPTKALACG 539

>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 48/290 (16%)
Query: 2   FRISNVGLSTSFN--FRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPK 59
           +R+  + LS   N  F I GH + ++EV+G  T  +  D L +  GQ  S ++  NQP  
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 254
Query: 60  DYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR 112
           +Y+I A     +N L  T       AIL Y       +G     PT   + +  Q     
Sbjct: 255 NYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLNEAD 307
Query: 113 WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLAD 172
            +   + A P   G    G  +      L  S        R+ +NG +Y +   P  L  
Sbjct: 308 LHALIDPAAP---GIPTPGAADVNLRFQLGFSG------GRFTINGTAYESPSVPTLLQ- 357
Query: 173 YFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFW 231
              + G  S N +  +P+G       SV ++  ++ +E+V           +HL G+ F 
Sbjct: 358 --IMSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 406
Query: 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLDNQGMW 279
           VV        +    TYN  + + R      V     T+  V+ DN G W
Sbjct: 407 VV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPW 448

>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 48/290 (16%)
Query: 2   FRISNVGLSTSFN--FRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPK 59
           +R+  + LS   N  F I GH + ++EV+G  T  +  D L +  GQ  S ++  NQP  
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 254
Query: 60  DYYIVASTRFTKNVLTAT-------AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR 112
           +Y+I A     +N L  T       AIL Y       +G     PT   + +  Q     
Sbjct: 255 NYWIRAQPNKGRNGLAGTFANGVNSAILRY-------AGAANADPTTSANPNPAQLNEAD 307
Query: 113 WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLAD 172
            +   + A P   G    G  +      L  S        R+ +NG +Y +   P  L  
Sbjct: 308 LHALIDPAAP---GIPTPGAADVNLRFQLGFSG------GRFTINGTAYESPSVPTLLQ- 357
Query: 173 YFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFW 231
              + G  S N +  +P+G       SV ++  ++ +E+V           +HL G+ F 
Sbjct: 358 --IMSGAQSANDL--LPAG-------SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 406
Query: 232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQ--VYPQSWTVILVSLDNQGMW 279
           VV        +    TYN  + + R      V     T+  V+ DN G W
Sbjct: 407 VV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPW 448

>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 122/322 (37%), Gaps = 82/322 (25%)
Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLV-TLNQPPK 59
           + RI NVG   S  F I+ H M +VE++G  T +N+ D L + V Q  +VLV T N   K
Sbjct: 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDK 248
Query: 60  DYYIVASTRFTKNV---------LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQART 110
           ++ I+   +F   +         L AT+ + Y       +  LPT              +
Sbjct: 249 NFAIMQ--KFDDTMLDVIPSDLQLNATSYMVYN-----KTAALPT---------QNYVDS 292
Query: 111 FRWNLTANAARPNPQGSFHYGKIN--TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPL 168
               L     +P  + +  YG+ +   T  +V+ N   L NG      N I+Y     P 
Sbjct: 293 IDNFLDDFYLQPYEKEAI-YGEPDHVITVDVVMDN---LKNGVNYAFFNNITYTAPKVP- 347
Query: 169 KLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLH-------EYIEVVFQNNEKTMQ 221
                          ++ +V S G  +  + +   N H       E +E+V  N +    
Sbjct: 348 ---------------TLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTH 392
Query: 222 SWHLDGYDFWVVGYGSGQWAAEKRRTYNLA----------DT--------LTRHTAQVYP 263
            +HL G+ F  +         ++ RTY+ A          D         + R T  V P
Sbjct: 393 PFHLHGHAFQTI---------QRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRP 443
Query: 264 QSWTVILVSLDNQGMWNMRSAI 285
           QS  VI    DN G+W     I
Sbjct: 444 QSNFVIRFKADNPGVWFFHCHI 465

>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           FRI +     ++ F I GH M ++EV+G        DSL +  GQ  SV+V  NQ   +Y
Sbjct: 224 FRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNY 283
Query: 62  YIVASTRFTKNVLTA---TAILHY 82
           +I A+    +N  T    +AI  Y
Sbjct: 284 WIRANPSNGRNGFTGGINSAIFRY 307

>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           FR+ ++    ++ F I GH M ++E +  +T   + DS+ +   Q  S ++  NQ   +Y
Sbjct: 198 FRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDNY 257
Query: 62  YIVASTRFTKNVLTA---TAILHY 82
           +I A+  F     T    +AIL Y
Sbjct: 258 WIRANPNFGNVGFTGGINSAILRY 281

>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           FR+ ++    +F F I GH + ++EV+ S++     DS+ +   Q  S ++  NQ   +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNY 257
Query: 62  YIVASTRF------------------------TKNVLTATAILHYTNSHSPASGPLPTGP 97
           +I A+  F                        T N  T+   L+  N H   S P+P  P
Sbjct: 258 WIRANPNFGNVGFNGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVNLHPLVSTPVPGSP 317
Query: 98  T 98
           +
Sbjct: 318 S 318

>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 43/291 (14%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
            R+ ++    +++F I GH M ++E +G  + +   D + +   Q  S ++  NQP  +Y
Sbjct: 201 MRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNY 260
Query: 62  YIVASTRFTKNVLTA---TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTAN 118
           +I A+             +AIL Y  + +  + P+    T      ++   T    L+ N
Sbjct: 261 WIRANPNSGGEGFDGGINSAILRYDGATT--ADPVTVASTVHTKCLIE---TDLHPLSRN 315
Query: 119 AARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTP--LKLADYFNI 176
               NP        +N +      N          + +NG+S+     P  L++    N 
Sbjct: 316 GVPGNPHQGGADCNLNLSLGFACGN----------FVINGVSFTPPTVPVLLQICSGAN- 364
Query: 177 PGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGY 235
                  +   +PSG       SV+ +  +  IE+            +HL G+DF V   
Sbjct: 365 ------TAADLLPSG-------SVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVS-- 409
Query: 236 GSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTV-ILVSLDNQGMWNMRSAI 285
                 +    T N  D + R    +      V I    DN G W +   I
Sbjct: 410 -----ESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHI 455

>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
           FR+ ++    ++ F I GH + ++EV+G ++   + DS+ +   Q  S ++  NQ   +Y
Sbjct: 198 FRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNY 257
Query: 62  YIVASTRF 69
           +I A+  F
Sbjct: 258 WIRANPNF 265

>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 115/317 (36%), Gaps = 64/317 (20%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
            R+ NVG+ + F F I  HT+ ++  +    +    D+L + +GQ   V+V  N    +Y
Sbjct: 265 LRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324
Query: 62  YIV---ASTRFTKN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           +I     +T  T N    AT IL Y +S    + P   G T                   
Sbjct: 325 WIRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTT------------------- 363
Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN-- 175
                 P+G        T     +A+  P     L   V G S V+        +YF   
Sbjct: 364 ------PRG--------TCEDEPVASLVP----HLALDVGGYSLVDEQVSSAFTNYFTWT 405
Query: 176 -----------IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSW- 223
                       P    + + +++     + VA  + Q N +E   V    +      W 
Sbjct: 406 INSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA--LEQTNANEEWVVYVIEDLTGFGIWH 463
Query: 224 --HLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             HL G+DF++V   +  + + E    +NL +   R  A +    +  I   LDN G W 
Sbjct: 464 PIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWL 523
Query: 281 MRSAI-WE-RQYLGQQF 295
           +   I W   + L  QF
Sbjct: 524 LHCHIAWHASEGLAMQF 540

>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 110/305 (36%), Gaps = 62/305 (20%)
Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDY 61
            R+ NVG+ + F F I  HT+ ++  +    +    D+L + +GQ   V+V  N    +Y
Sbjct: 265 LRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324
Query: 62  YIV---ASTRFTKN-VLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           +I     +T  T N    AT IL Y +S    + P   G T                   
Sbjct: 325 WIRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTT------------------- 363
Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN-- 175
                 P+G        T     +A+  P     L   V G S V+        +YF   
Sbjct: 364 ------PRG--------TCEDEPVASLVP----HLALDVGGYSLVDEQVSSAFTNYFTWT 405
Query: 176 -----------IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSW- 223
                       P    + + +++     + VA  + Q N +E   V    +      W 
Sbjct: 406 INSSSLLLDWSSPTTLKIFNNETIFPTEYNVVA--LEQTNANEEWVVYVIEDLTGFGIWH 463
Query: 224 --HLDGYDFWVVGYGSGQW-AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             HL G+DF++V   +  + + E    +NL +   R  A +    +  I   LDN G W 
Sbjct: 464 PIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWL 523
Query: 281 MRSAI 285
           +   I
Sbjct: 524 LHCHI 528

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
1aoz_A	552	Ascorbate oxidase; oxidoreductase(oxygen acceptor)	1e-104
1hfu_A	503	Laccase 1; oxidoreductase, blue multi-copper oxida	5e-39
3sqr_A	580	Laccase; multicopper oxidase, glycosylation, oxido	2e-37
3pxl_A	499	Laccase; 4-copper protein, metal-binding, oxidored	3e-35
3t6v_A	495	Laccase; beta barrel, oxidoreductase; HET: CBS; 2.	1e-34
1v10_A	521	Laccase; multicopper blue oxidase, oxidase; 1.7A {	6e-33
2q9o_A	559	Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct	2e-32
1zpu_A	534	Iron transport multicopper oxidase FET3; ferroxida	7e-31
2zwn_A	339	Two-domain type laccase; muticopper oxidase, oxido	5e-10
2xu9_A	439	Laccase; oxidoreductase, multicopper oxidases; 1.5	5e-08
3g5w_A	318	Multicopper oxidase type 1; two domain, laccase, n	9e-06
3zx1_A	481	Oxidoreductase, putative; laccase, metallo-oxidase	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05

>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552

 Score =  315 bits (808), Expect = e-104
 Identities = 90/345 (26%), Positives = 152/345 (44%), Gaps = 35/345 (10%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             RI++     + NF I  H + +VE +G++        +D++ G+S SVL+T +Q P +
Sbjct: 215 RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE 274

Query: 61  -YYIVASTRFTK-NVLTATAILHYTNSH--SPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
            Y++   TR    N      +L+Y  +      + P P  P ++      +++ F + +T
Sbjct: 275 NYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD---DFDRSKNFTYRIT 331

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
           A    P P        +   R I L N+  +ING +++A+N +S     TP   A  +N+
Sbjct: 332 AAMGSPKPP-------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNL 384

Query: 177 PGIFSVNS----------IQSVPSGGASSVATSVMQVNLHEYIEVVFQN------NEKTM 220
              F  N           I + P+   + +   V Q  + E ++V+ QN      N    
Sbjct: 385 LHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSET 444

Query: 221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN 280
             WHL G+DFWV+GYG G+++AE+  + NL +   R+T  ++P  WT I    DN G+W 
Sbjct: 445 HPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWA 504

Query: 281 MRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGH 325
               I    ++G             +     IP+  L CG     
Sbjct: 505 FHCHIEPHLHMGMGVVFAE-----GVEKVGRIPTKALACGGTAKS 544

>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503

 Score =  143 bits (362), Expect = 5e-39
 Identities = 57/290 (19%), Positives = 93/290 (32%), Gaps = 44/290 (15%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             R+ ++    ++ F I GH + ++EV+G  T  +  D L +  GQ  S ++  NQP  +
Sbjct: 196 RMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDN 255

Query: 61  YYIVAS-------TRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRW 113
           Y+I A           T      +AIL Y    +  + P  +        +         
Sbjct: 256 YWIRAQPNKGRNGLAGTFANGVNSAILRYAG--AANADPTTSANPNPAQLNEADLHAL-- 311

Query: 114 NLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADY 173
                   P   G    G  +      L  S        R+ +NG +Y +   P  L   
Sbjct: 312 ------IDPAAPGIPTPGAADVNLRFQLGFSGG------RFTINGTAYESPSVPTLLQIM 359

Query: 174 FNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ-SWHLDGYDFWV 232
                                  A SV ++  ++ +E+V           +HL G+ F V
Sbjct: 360 SGAQSAND------------LLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSV 407

Query: 233 VGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQ-SWTVILVSLDNQGMWNM 281
           V             TYN  + + R    +        I    DN G W  
Sbjct: 408 VRSAG-------SSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFF 450

>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580

 Score =  139 bits (353), Expect = 2e-37
 Identities = 57/287 (19%), Positives = 98/287 (34%), Gaps = 36/287 (12%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             R+ NVG+ + F F I  HT+ ++  +    +    D+L + +GQ   V+V  N    +
Sbjct: 264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADN 323

Query: 61  YYIVASTRF----TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLT 116
           Y+I  +             AT IL Y +  S  + P   G T                  
Sbjct: 324 YWIRGNWGTTCSTNNEAANATGILRYDS--SSIANPTSVGTTPRGTC-----------ED 370

Query: 117 ANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNI 176
              A   P  +   G      ++V    +        + +N  S +   +       FN 
Sbjct: 371 EPVASLVPHLALDVG----GYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNN 426

Query: 177 PGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQS---WHLDGYDFWVV 233
             IF                  ++ Q N +E   V    +          HL G+DF++V
Sbjct: 427 ETIF-----------PTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIV 475

Query: 234 GYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
              +  + +++    +NL +   R  A +    +  I   LDN G W
Sbjct: 476 AQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522

>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499

 Score =  132 bits (335), Expect = 3e-35
 Identities = 57/288 (19%), Positives = 98/288 (34%), Gaps = 44/288 (15%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
            FR+ ++  + +  F I GH + ++EV+  ++     DS+ +   Q  S ++  NQ   +
Sbjct: 197 RFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDN 256

Query: 61  YYIVASTRF---TKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           Y+I A+  F     +    +AIL Y    +PA  P     T     +         +L  
Sbjct: 257 YWIRANPNFGNVGFDGGINSAILRYDG--APAVEPTTNQTTSVKPLNE-------VDLHP 307

Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP 177
             + P P            + I +A      NG   + +NG S+V    P+ L       
Sbjct: 308 LVSTPVPGAPSS---GGVDKAINMAF---NFNGS-NFFINGASFVPPTVPVLLQILSGAQ 360

Query: 178 GIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQS---WHLDGYDFWVVG 234
               +              + SV  +  +  IE+ F        +   +HL G+ F VV 
Sbjct: 361 TAQDL------------LPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR 408

Query: 235 YGSGQWAAEKRRTYNLADTLTRHTAQVYPQ---SWTVILVSLDNQGMW 279
                        YN  + + R               I    +N G W
Sbjct: 409 SAGST-------VYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPW 449

>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495

 Score =  131 bits (331), Expect = 1e-34
 Identities = 55/284 (19%), Positives = 97/284 (34%), Gaps = 39/284 (13%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             R+ ++    +++F I GH M ++E +G  + +   D + +   Q  S ++  NQP  +
Sbjct: 200 RMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGN 259

Query: 61  YYIVA---STRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           Y+I A   S     +    +AIL Y    +  + P+    T               +L  
Sbjct: 260 YWIRANPNSGGEGFDGGINSAILRYDG--ATTADPVTVASTVHTKC------LIETDLHP 311

Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP 177
            +    P       +      + L+    L      + +NG+S+     P+ L       
Sbjct: 312 LSRNGVPGNPH---QGGADCNLNLS----LGFACGNFVINGVSFTPPTVPVLLQICSGAN 364

Query: 178 GIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ-SWHLDGYDFWVVGYG 236
                 +   +PS        SV+ +  +  IE+            +HL G+DF V    
Sbjct: 365 -----TAADLLPS-------GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESA 412

Query: 237 SGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGMW 279
           S         T N  D + R    +        I    DN G W
Sbjct: 413 SNS-------TSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPW 449

>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521

 Score =  126 bits (319), Expect = 6e-33
 Identities = 57/283 (20%), Positives = 90/283 (31%), Gaps = 40/283 (14%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
            FRI +     ++ F I GH M ++EV+G        DSL +  GQ  SV+V  NQ   +
Sbjct: 223 RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGN 282

Query: 61  YYIVA---STRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTA 117
           Y+I A   + R        +AI  Y      A+   PT                  NL  
Sbjct: 283 YWIRANPSNGRNGFTGGINSAIFRYQG----AAVAEPTTSQNSG------TALNEANLIP 332

Query: 118 NAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIP 177
                 P              + L            + +NG  ++    P+ L       
Sbjct: 333 LINPGAPGNPVPG---GADINLNLRIG--RNATTADFTINGAPFIPPTVPVLLQILSG-- 385

Query: 178 GIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGS 237
               V +   +  G       +V+ +  ++ IE+           +HL G++F VV    
Sbjct: 386 ----VTNPNDLLPG------GAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVRTPG 433

Query: 238 GQWAAEKRRTYNLADTLTRHTAQVYPQ-SWTVILVSLDNQGMW 279
                     YN  + + R    +             DN G W
Sbjct: 434 SS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469

>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559

 Score =  125 bits (316), Expect = 2e-32
 Identities = 55/297 (18%), Positives = 91/297 (30%), Gaps = 41/297 (13%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             RI N      F   +  HTM ++  +         DSL + VGQ   V++  ++ P +
Sbjct: 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDN 285

Query: 61  YYIVASTRFTKNV-----LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNL 115
           Y+   +                AI HY      A G LPT         +        ++
Sbjct: 286 YWFNVTFGGQAACGGSLNPHPAAIFHYAG----APGGLPTDEGTP---PVDHQCLDTLDV 338

Query: 116 TANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFN 175
                R  P  SF   + + T  + L  +         + VNG           +     
Sbjct: 339 RPVVPRSVPVNSF-VKRPDNTLPVALDLTG---TPLFVWKVNGSDINVDWGKPII----- 389

Query: 176 IPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQS---WHLDGYDFWV 232
                  + I +  +    S     +         ++  + E         HL G+DF V
Sbjct: 390 -------DYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLV 442

Query: 233 VGYGSGQWAAEKRR----------TYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
           +G      AA ++R            N  +   R T  +    W ++    DN G W
Sbjct: 443 LGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 499

>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534

 Score =  120 bits (304), Expect = 7e-31
 Identities = 60/298 (20%), Positives = 94/298 (31%), Gaps = 46/298 (15%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
           + RI NVG   S  F I+ H M +VE++G  T +N+ D L + V Q  +VLV        
Sbjct: 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDK 248

Query: 61  YYIVASTRFTKNV--------LTATAILHYTNSHS-PASGPLPTGPTYEIHWSMKQARTF 111
            + +        +        L AT+ + Y  + + P    + +   +            
Sbjct: 249 NFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNF----------LD 298

Query: 112 RWNLTANAARPNPQGSFHYGKINTTRTIVLA-NSAPLINGKLRYAVNGISYVNSDTPLKL 170
            + L                       I +      L NG      N I+Y     P  +
Sbjct: 299 DFYLQPYEKEAIYG--------EPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLM 350

Query: 171 ADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDF 230
                       N+ +   S       T    +   E +E+V  N +     +HL G+ F
Sbjct: 351 TVLS---SGDQANNSEIYGSN------THTFILEKDEIVEIVLNNQDTGTHPFHLHGHAF 401

Query: 231 WVVGYGSGQWAAE---------KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
             +        A                    + R T  V PQS  VI    DN G+W
Sbjct: 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVW 459

>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339

 Score = 59.0 bits (143), Expect = 5e-10
 Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 15/139 (10%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIY-DSLDVHVGQSVSVLVTLNQPPK 59
             R    G          GH M +   +G       Y D++ V  G+   V++  + P +
Sbjct: 190 KIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADNPGR 248

Query: 60  DYYIVASTRFTKN----VLTATAILHYT---NSHSPASGPLPTGPTYEIHWSMKQA---- 108
             +                    ++ Y                 P +    S+KQ     
Sbjct: 249 FIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDKDYDPNFFYSESLKQGYGMF 308

Query: 109 --RTFRWNLTANAARPNPQ 125
               F+        RP  +
Sbjct: 309 DHDGFKGEFEQRQRRPGRK 327

>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 39/279 (13%), Positives = 70/279 (25%), Gaps = 60/279 (21%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ-NIYDSLDVHVGQSVSVLVTLNQPPKD 60
            R+ N   +  +   +Q H + L+  +G    +      L +  G+   VLV L +  + 
Sbjct: 199 LRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGR- 257

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
           + + A          A  ++                 T     + K  +        +  
Sbjct: 258 FLLQALP----YDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPF 313

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
              P           TR +VL           R+ +NG  + +    LK           
Sbjct: 314 PTLPAPV-------VTRRLVLTED----MMAARFFINGQVFDHRRVDLKG---------- 352

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW 240
                                Q    E  EV   N       +HL  + F V+       
Sbjct: 353 ---------------------QAQTVEVWEVE--NQGDMDHPFHLHVHPFQVL------- 382

Query: 241 AAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
                          +    +       +LV L  +G  
Sbjct: 383 ---SVGGRPFPYRAWKDVVNLKAGEVARLLVPLREKGRT 418

>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIY-DSLDVHVGQSVSVLVTLNQP 57
             R+   G          GH  ++   +G    + I  D++ +  G+   V++ ++ P
Sbjct: 189 RLRLIGAGD-HVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP 245

>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481

 Score = 43.8 bits (103), Expect = 5e-05
 Identities = 36/280 (12%), Positives = 75/280 (26%), Gaps = 54/280 (19%)

Query: 2   FRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIY-DSLDVHVGQSVSVLVTLNQPPKD 60
            RI N   +   N RIQG    LV  +G    + IY + L +     V VL+   +    
Sbjct: 232 IRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGN- 290

Query: 61  YYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA 120
            + + S  + ++ +      +     +                  +  +  +    +   
Sbjct: 291 -FKLESAYYDRDKMMVKEEPNTLFLANINLKKENV----------ELPKNLKIFKPSEEP 339

Query: 121 RPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF 180
           +   +       +     +  +     I     + +N  SY      L            
Sbjct: 340 KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLS----------- 388

Query: 181 SVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVG-YGSGQ 239
                                   L    + +  N       +H+ G  F ++    +G+
Sbjct: 389 ----------------------SKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGK 426

Query: 240 WAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
               + R         R T  V P     + +  D +G+ 
Sbjct: 427 VQKAEFRAL-------RDTINVRPNEELRLRMKQDFKGLR 459

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 46/331 (13%), Positives = 89/331 (26%), Gaps = 119/331 (35%)

Query: 40  LDVHVGQ---SVSVLVTLNQPP--KDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLP 94
           +D   G+       ++++ +     ++         K++L+   I H   S    SG   
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG--- 63

Query: 95  TGPTYEIHWSM--KQART------------FRWNLTANAARPNPQGSFHYGKINTTRTIV 140
              T  + W++  KQ               +++ ++        Q S         R   
Sbjct: 64  ---TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMMTRMYIEQRD-R 118

Query: 141 LANSAPLIN----------GKLRYA-----------VNG---------ISYVNSDTPLKL 170
           L N   +             KLR A           ++G            V     ++ 
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178

Query: 171 ADYFNIPGIFSVNSIQSVPSGGASSVATSV--MQVNLHEYIEVVFQNNEKTMQSWHLDGY 228
              F    IF +N           +   +V  M   L   I+  + +      +      
Sbjct: 179 KMDF---KIFWLNL-------KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN------ 222

Query: 229 DFWVVGYGSGQWAAEKRRTYNLADTLTRH-TAQVYPQSWTVILVSLDNQGMWNMRSAIWE 287
                          K R +++   L R   ++ Y       L+ L N         +  
Sbjct: 223 --------------IKLRIHSIQAELRRLLKSKPYENC----LLVLLN---------VQN 255

Query: 288 RQYLGQQFYLKVWNAVHSLANEYDIPSNILV 318
                     K WNA       +++   IL+
Sbjct: 256 A---------KAWNA-------FNLSCKILL 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
1aoz_A	552	Ascorbate oxidase; oxidoreductase(oxygen acceptor)	100.0
3sqr_A	580	Laccase; multicopper oxidase, glycosylation, oxido	100.0
3pxl_A	499	Laccase; 4-copper protein, metal-binding, oxidored	100.0
3t6v_A	495	Laccase; beta barrel, oxidoreductase; HET: CBS; 2.	100.0
1zpu_A	534	Iron transport multicopper oxidase FET3; ferroxida	100.0
1v10_A	521	Laccase; multicopper blue oxidase, oxidase; 1.7A {	100.0
1hfu_A	503	Laccase 1; oxidoreductase, blue multi-copper oxida	100.0
2q9o_A	559	Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct	100.0
2xu9_A	439	Laccase; oxidoreductase, multicopper oxidases; 1.5	100.0
3abg_A	534	Bilirubin oxidase; cleavage on PAIR of basic resid	100.0
2wsd_A	513	Spore coat protein A; oxidoreductase, multi-copper	100.0
2uxt_A	451	Protein SUFI, SUFI; oxidoreductase, periplasmic, c	100.0
3gyr_A	612	PHS, phenoxazinone synthase; metalloprotein, lacca	100.0
3aw5_A	448	Multicopper oxidase; beta barrel, oxidoreductase;	100.0
3zx1_A	481	Oxidoreductase, putative; laccase, metallo-oxidase	100.0
2g23_A	612	PHS, phenoxazinone synthase; copper, metalloprotei	100.0
3od3_A	488	Blue copper oxidase CUEO; multicopper oxidase, Cu(	100.0
2dv6_A	447	Nitrite reductase; electron transfer, reduction, d	99.95
3cg8_A	343	Laccase; oxidoreductase, multicopper blue protein;	99.95
2zwn_A	339	Two-domain type laccase; muticopper oxidase, oxido	99.94
3gdc_A	288	Multicopper oxidase; beta sandwich, plasmid, oxido	99.92
3kw8_A	276	Laccase, putative copper oxidase; two-domain lacca	99.92
3tas_A	313	Small laccase, multi-copper oxidase; two-domain la	99.89
3t9w_A	299	Small laccase, multi-copper oxidase; two-domain co	99.89
3g5w_A	318	Multicopper oxidase type 1; two domain, laccase, n	99.88
2j5w_A	1065	Ceruloplasmin, ferroxidase; oxidoreductase, plasma	99.87
1sdd_B	647	Coagulation factor V; copper-binding protein, cofa	99.83
1sdd_A	306	Coagulation factor V; copper-binding protein, cofa	99.81
2j5w_A	1065	Ceruloplasmin, ferroxidase; oxidoreductase, plasma	99.8
2bw4_A	340	Copper-containing nitrite reductase; oxidoreductas	99.76
2r7e_B	770	Coagulation factor VIII; ceruloplasmin fold, cuppe	99.74
1kbv_A	327	ANIA, major outer membrane protein PAN 1; ANIA[NO2	99.73
2r7e_A	742	Coagulation factor VIII; ceruloplasmin fold, cuppe	99.69
2r7e_A	742	Coagulation factor VIII; ceruloplasmin fold, cuppe	99.67
1mzy_A	333	Copper-containing nitrite reductase; mutant M182T,	99.57
1kbv_A	327	ANIA, major outer membrane protein PAN 1; ANIA[NO2	99.53
1oe1_A	336	Dissimilatory copper-containing nitrite reductase;	99.38
2zoo_A	442	Probable nitrite reductase; electron transfer, ele	99.38
2dv6_A	447	Nitrite reductase; electron transfer, reduction, d	99.37
2aan_A	139	Auracyanin A; cupredoxin fold, electron transport;	99.33
2zoo_A	442	Probable nitrite reductase; electron transfer, ele	99.31
3cvb_A	105	Plastocyanin; cupredoxin, SELF assembly, copper, e	99.26
2zwn_A	339	Two-domain type laccase; muticopper oxidase, oxido	99.24
3gdc_A	288	Multicopper oxidase; beta sandwich, plasmid, oxido	99.23
3g5w_A	318	Multicopper oxidase type 1; two domain, laccase, n	99.14
1oe1_A	336	Dissimilatory copper-containing nitrite reductase;	99.02
2gim_A	106	Plastocyanin; beta sheet, Cu, helix, electron tran	98.97
1qhq_A	140	Protein (auracyanin); electron transfer, cupredoxi	98.92
2bw4_A	340	Copper-containing nitrite reductase; oxidoreductas	98.88
1mzy_A	333	Copper-containing nitrite reductase; mutant M182T,	98.88
1pcs_A	98	Plastocyanin; electron transport; 2.15A {Synechocy	98.79
1bxv_A	91	Plastocyanin; copper protein, electron transfer; 1	98.78
2plt_A	98	Plastocyanin; electron transport; 1.50A {Chlamydom	98.78
1b3i_A	97	PETE protein, protein (plastocyanin); electron tra	98.67
1iby_A	112	Nitrosocyanin; RED copper, cupredoxin, beta hairpi	98.66
1byp_A	99	Protein (plastocyanin); electron transfer, photosy	98.57
4hci_A	100	Cupredoxin 1; structural genomics, niaid, national	98.51
3kw8_A	276	Laccase, putative copper oxidase; two-domain lacca	98.47
1kdj_A	102	Plastocyanin; electron transfer, photosystem, PAI-	98.43
1sdd_B	647	Coagulation factor V; copper-binding protein, cofa	98.4
3cg8_A	343	Laccase; oxidoreductase, multicopper blue protein;	98.31
1aoz_A	552	Ascorbate oxidase; oxidoreductase(oxygen acceptor)	98.31
3tas_A	313	Small laccase, multi-copper oxidase; two-domain la	98.27
1plc_A	99	Plastocyanin; electron transport; 1.33A {Populus n	98.27
2q9o_A	559	Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct	98.25
1hfu_A	503	Laccase 1; oxidoreductase, blue multi-copper oxida	98.22
2xu9_A	439	Laccase; oxidoreductase, multicopper oxidases; 1.5	98.2
1v10_A	521	Laccase; multicopper blue oxidase, oxidase; 1.7A {	98.19
3t9w_A	299	Small laccase, multi-copper oxidase; two-domain co	98.19
1sdd_A	306	Coagulation factor V; copper-binding protein, cofa	98.17
3pxl_A	499	Laccase; 4-copper protein, metal-binding, oxidored	98.12
3t6v_A	495	Laccase; beta barrel, oxidoreductase; HET: CBS; 2.	98.11
2cal_A	154	Rusticyanin; iron respiratory electron transport c	98.08
1zpu_A	534	Iron transport multicopper oxidase FET3; ferroxida	98.08
3sqr_A	580	Laccase; multicopper oxidase, glycosylation, oxido	98.07
2uxt_A	451	Protein SUFI, SUFI; oxidoreductase, periplasmic, c	98.07
2ov0_A	105	Amicyanin; beta-sandwich, electron transport; 0.75	98.06
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.04
3aw5_A	448	Multicopper oxidase; beta barrel, oxidoreductase;	97.99
3od3_A	488	Blue copper oxidase CUEO; multicopper oxidase, Cu(	97.93
3zx1_A	481	Oxidoreductase, putative; laccase, metallo-oxidase	97.91
3abg_A	534	Bilirubin oxidase; cleavage on PAIR of basic resid	97.74
2r7e_B	770	Coagulation factor VIII; ceruloplasmin fold, cuppe	97.7
3erx_A	123	Pseudoazurin; copper protein, high-resolution, E t	97.62
3tu6_A	127	Pseudoazurin (blue copper protein); cupredoxins, b	97.6
3ef4_A	124	Pseudoazurin, blue copper protein; electron transf	97.51
1iuz_A	98	Plastocyanin; electron transport; 1.60A {Ulva pert	97.47
2wsd_A	513	Spore coat protein A; oxidoreductase, multi-copper	97.34
2g23_A	612	PHS, phenoxazinone synthase; copper, metalloprotei	97.33
1id2_A	106	Amicyanin; beta barrel, type-1 blue copper protein	97.31
3c75_A	132	Amicyanin; copper proteins, electron transfer comp	97.14
1paz_A	123	Pseudoazurin precursor; electron transfer(cupropro	97.13
1pmy_A	123	Pseudoazurin; electron transfer(cuproprotein); 1.5	97.11
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.63
2ux6_A	122	Pseudoazurin; type-1 copper, metal-binding, redox	96.53
3gyr_A	612	PHS, phenoxazinone synthase; metalloprotein, lacca	96.52
3ay2_A	167	Lipid modified azurin protein; beta sandwich, bact	96.34
1cuo_A	129	Protein (azurin ISO-2); beta barrel, periplasmic,	96.23
2cua_A	135	Protein (CUA); CUA center, electron transport; 1.6	95.93
3s8f_B	168	Cytochrome C oxidase subunit 2; complex IV, respir	95.46
2iaa_C	128	Azurin; quinoprotein, tryptophan tryptophylquinone	95.2
2ccw_A	129	Azurin II, AZN-2; electron transport (cuproprotein	95.18
1nwp_A	128	Azurin; electron transport, cupredoxin, electron t	94.94
3fsa_A	125	Azurin; copper, cupredoxin fold, metal-binding, pr	93.65
2aan_A	139	Auracyanin A; cupredoxin fold, electron transport;	89.25
1cyx_A	205	CYOA; electron transport; 2.30A {Escherichia coli}	86.88
3hb3_B	298	Cytochrome C oxidase subunit 2; electron transfer,	84.68

>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*

Probab=100.00  E-value=2e-63  Score=493.03  Aligned_cols=304  Identities=28%  Similarity=0.524  Sum_probs=233.4

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEe-CCCCCceEEEEEecccC-CCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTL-NQPPKDYYIVASTRFTK-NVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~-~~~~~~y~ir~~~~~~~-~~~~~~a   78 (327)
                      ||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++||||||+|++ ++++|+|||++....+. ......|
T Consensus       215 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~a  294 (552)
T 1aoz_A          215 RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLT  294 (552)
T ss_dssp             EEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEE
T ss_pred             EEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEE
Confidence            899999999999999999999999999999999999999999999999999999 55678999999876542 3456889


Q ss_pred             EEEecCCCCC--CCCCCCCCCC-CcccccccccccccccccccC---CCCCCCCCCCCCCcCceEEEEEeccccccCCeE
Q 020366           79 ILHYTNSHSP--ASGPLPTGPT-YEIHWSMKQARTFRWNLTANA---ARPNPQGSFHYGKINTTRTIVLANSAPLINGKL  152 (327)
Q Consensus        79 il~y~~~~~~--~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~  152 (327)
                      +|+|.+....  .+.+.|..|. ++.+..   |. +  .+.+..   +.+.|        ..+++++.+...+...++..
T Consensus       295 il~y~~~~~~~~p~~~~p~~p~~~~~~~~---~~-~--~l~~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~  360 (552)
T 1aoz_A          295 LLNYLPNSVSKLPTSPPPQTPAWDDFDRS---KN-F--TYRITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYV  360 (552)
T ss_dssp             EEEETTSCTTSCCSSCCCCCCCTTCHHHH---HH-H--HTTCCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCcccccccc---cc-c--cccccccCCCCCCC--------CCCcEEEEEEEeeccCCCeE
Confidence            9999876421  1112222221 111110   00 0  111111   11111        24577877765433345567


Q ss_pred             EEEEcCccCcCCCCccccccccCCCCccccCCCCC----------CCCCCCCcceeeEEEecCCcEEEEEEEeCCC----
Q 020366          153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS----------VPSGGASSVATSVMQVNLHEYIEVVFQNNEK----  218 (327)
Q Consensus       153 ~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~----  218 (327)
                      .|+|||++|..++.|+|.+.+.++.|+|+.+....          .+.+...+.+++++.++.|++|||+|+|.+.    
T Consensus       361 ~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~  440 (552)
T 1aoz_A          361 KWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKEN  440 (552)
T ss_dssp             EEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTT
T ss_pred             EEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccc
Confidence            89999999998899999877666666665332110          0112344667888999999999999999874    


Q ss_pred             --CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEE
Q 020366          219 --TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFY  296 (327)
Q Consensus       219 --~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~  296 (327)
                        ..||||||||+||||++|.|.|++.....+|+.+|+|||||.|+++||++|||+|||||+|||||||++|+++|||++
T Consensus       441 ~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~  520 (552)
T 1aoz_A          441 LSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVV  520 (552)
T ss_dssp             CCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEE
T ss_pred             cCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEE
Confidence              469999999999999999999987545578999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCcccccccCCCCCchhhccccC
Q 020366          297 LKVWNAVHSLANEYDIPSNILVCGKAV  323 (327)
Q Consensus       297 ~~v~~~~~~~~~~~~~P~~~~~C~~~~  323 (327)
                      |.+...  .+   .++|+++++|++++
T Consensus       521 ~~~~~~--~~---~~~P~~~~~C~~~~  542 (552)
T 1aoz_A          521 FAEGVE--KV---GRIPTKALACGGTA  542 (552)
T ss_dssp             EEECGG--GC---CCCCHHHHSSHHHH
T ss_pred             EEeCch--hh---ccCCcchhhhhccC
Confidence            976532  33   66899999999876

>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}

Probab=100.00  E-value=1.6e-60  Score=470.55  Aligned_cols=288  Identities=20%  Similarity=0.294  Sum_probs=214.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC----CCcee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK----NVLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~----~~~~~   76 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|+++++|.|++||||||||+++++.|+||||+.....+    ...+.
T Consensus       264 RlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~  343 (580)
T 3sqr_A          264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANA  343 (580)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGC
T ss_pred             EEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCce
Confidence            89999999999999999999999999999999999999999999999999999999889999999875321    12468


Q ss_pred             EEEEEecCCCCCCCCCCCCCCCCccccccccccccc-ccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEE
Q 020366           77 TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFR-WNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYA  155 (327)
Q Consensus        77 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~-~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  155 (327)
                      +|||+|.++...    .|..+....   ...|.+.. ..|.|..+.+.|.        ..+.++.+...   .++..+|+
T Consensus       344 ~aiL~Y~~~~~~----~P~~~~~~~---~~~~~~~~~~~L~P~~~~~~~~--------~~~~~~~l~~~---~~~~~~w~  405 (580)
T 3sqr_A          344 TGILRYDSSSIA----NPTSVGTTP---RGTCEDEPVASLVPHLALDVGG--------YSLVDEQVSSA---FTNYFTWT  405 (580)
T ss_dssp             EEEEESSTTCCC----CCCCCCCCC---CCCSCCSCGGGCCBSSCCBCCS--------EEEEEEEEEEE---ESSSEEEE
T ss_pred             EEEEEECCCCCC----CCCCCCCCc---cchhhcccccccccCCCCCCCC--------ccceEEEEEec---cCCceeEE
Confidence            999999865421    121111000   01121111 2355543333221        23344444331   24567999


Q ss_pred             EcCccCc-CCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEec----CCcEEEEEEEeCC--CCcCceeecCC
Q 020366          156 VNGISYV-NSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVN----LHEYIEVVFQNNE--KTMQSWHLDGY  228 (327)
Q Consensus       156 iN~~~~~-~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~g~~v~ivi~N~~--~~~HP~HLHG~  228 (327)
                      |||++|. ++..|+|.+.+.+.         ...|.      ..+++.++    .|++|||+|+|.+  ...||||||||
T Consensus       406 iN~~s~~~~~~~P~L~~~~~g~---------~~~~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh  470 (580)
T 3sqr_A          406 INSSSLLLDWSSPTTLKIFNNE---------TIFPT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGH  470 (580)
T ss_dssp             ETTBCCCCCTTSCHHHHHHTTC---------CCCCG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSC
T ss_pred             ECCEecccCCCCCchhhhhcCC---------ccCCC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCc
Confidence            9999997 57889876543211         01121      23455665    6999999999988  78999999999


Q ss_pred             CeEEEEeccCCCCccc-cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCccccc
Q 020366          229 DFWVVGYGSGQWAAEK-RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLA  307 (327)
Q Consensus       229 ~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~  307 (327)
                      +||||++|.|.|+++. ...+|+.||++|||+.|+++||++|||++||||+|+|||||++|+.+||+++|.+ ++ +.++
T Consensus       471 ~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~-~~i~  548 (580)
T 3sqr_A          471 DFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQ-SSIA  548 (580)
T ss_dssp             CEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SG-GGCC
T ss_pred             eEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CH-HHHh
Confidence            9999999999998653 3578999999999999999999999999999999999999999999999999975 33 3343


Q ss_pred             ccCCCCCchh-hccccC
Q 020366          308 NEYDIPSNIL-VCGKAV  323 (327)
Q Consensus       308 ~~~~~P~~~~-~C~~~~  323 (327)
                      +..++|+++. .|.+|.
T Consensus       549 ~~~~~~~~~~~~C~~~~  565 (580)
T 3sqr_A          549 VKMTDTAIFEDTCANWN  565 (580)
T ss_dssp             CCHHHHHHHHHHHHHHH
T ss_pred             hccCCcHHHHHhhHHHh
Confidence            3234777765 897663

>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*

Probab=100.00  E-value=2.8e-58  Score=449.08  Aligned_cols=290  Identities=21%  Similarity=0.295  Sum_probs=211.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCC---ceeE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNV---LTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~---~~~~   77 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++||||||||+++++.|+||||+........   ....
T Consensus       197 RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~  276 (499)
T 3pxl_A          197 RFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINS  276 (499)
T ss_dssp             EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred             EEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceE
Confidence            8999999999999999999999999999999999999999999999999999999877899999986532211   2357


Q ss_pred             EEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEc
Q 020366           78 AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN  157 (327)
Q Consensus        78 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN  157 (327)
                      |+|+|.++....+...+..+...       +.  +.+|.|..+.+.|...   ....+++++.+...+   ++ ..|+||
T Consensus       277 ail~Y~~~~~~~p~~~~~~~~~~-------~~--~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~~---~~-~~w~iN  340 (499)
T 3pxl_A          277 AILRYDGAPAVEPTTNQTTSVKP-------LN--EVDLHPLVSTPVPGAP---SSGGVDKAINMAFNF---NG-SNFFIN  340 (499)
T ss_dssp             EEEEETTSCSSCCCCCCCCCSSB-------CC--GGGCCBSSCCCCSSCS---STTCSSEEEECCEEE---CS-SCEEET
T ss_pred             EEEEeCCCCCCCCCCCCCCCCcc-------cc--cccccccccccCCCcc---cCCCCcEEEEEEEEe---cC-cEEEEc
Confidence            99999876421110000000011       00  1234444322222110   012356676655422   12 279999


Q ss_pred             CccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE---eCCCCcCceeecCCCeEEEE
Q 020366          158 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ---NNEKTMQSWHLDGYDFWVVG  234 (327)
Q Consensus       158 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~---N~~~~~HP~HLHG~~F~Vl~  234 (327)
                      |++|..++.|+|.+.+.   |.+....         .....+++.++.|++|||+|+   |...+.||||||||+||||+
T Consensus       341 g~s~~~~~~P~L~~~~~---g~~~~~~---------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~  408 (499)
T 3pxl_A          341 GASFVPPTVPVLLQILS---GAQTAQD---------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR  408 (499)
T ss_dssp             TBCCCCCSSCHHHHHHT---TCCSTTT---------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEE
T ss_pred             CEecCCCCCchhhhhhc---CCccccc---------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEe
Confidence            99999999998876532   2211110         011246789999999999999   56678999999999999998


Q ss_pred             eccCCCCccccccCCCCCCCceeeEEeCC---CCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCC
Q 020366          235 YGSGQWAAEKRRTYNLADTLTRHTAQVYP---QSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYD  311 (327)
Q Consensus       235 ~g~G~~~~~~~~~~n~~~p~~rDTv~vp~---~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~  311 (327)
                      .+ |      ...+|+.||+||||+.|++   +||++|||+|||||.|||||||++|+.+||+++|. .. .+.+++...
T Consensus       409 ~~-g------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~-~~~~~~~~~  479 (499)
T 3pxl_A          409 SA-G------STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-ED-TPDVKAVNP  479 (499)
T ss_dssp             CT-T------CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ES-GGGHHHHSC
T ss_pred             cc-C------CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEE-EC-hhHhccccC
Confidence            75 3      2357889999999999997   99999999999999999999999999999998884 33 344543456


Q ss_pred             CCCchh-hccccCCCCC
Q 020366          312 IPSNIL-VCGKAVGHHP  327 (327)
Q Consensus       312 ~P~~~~-~C~~~~~~~~  327 (327)
                      +|+++. .|.+|...++
T Consensus       480 ~p~~~~~~C~~~~~~~~  496 (499)
T 3pxl_A          480 VPQAWSDLCPTYDALDP  496 (499)
T ss_dssp             CCHHHHTHHHHHHTSCG
T ss_pred             CCHHHHHhhhHhhccCc
Confidence            787765 9998877653

>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*

Probab=100.00  E-value=3.1e-58  Score=448.68  Aligned_cols=287  Identities=20%  Similarity=0.252  Sum_probs=209.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCC---ceeE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNV---LTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~---~~~~   77 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+++|+.+++|.|++||||||||+++++.|+||||+........   ....
T Consensus       200 RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~  279 (495)
T 3t6v_A          200 RMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINS  279 (495)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred             EEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceE
Confidence            8999999999999999999999999999999999999999999999999999999887899999986532211   2347


Q ss_pred             EEEEecCCCCCCCC-CCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEE
Q 020366           78 AILHYTNSHSPASG-PLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAV  156 (327)
Q Consensus        78 ail~y~~~~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i  156 (327)
                      |||+|.++....+. ..+..+..+       +.  +.+|.|..+.+.|...   ....+++++.+...+  . + ..|+|
T Consensus       280 ail~Y~~~~~~~p~~~~~~~~~~~-------~~--~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~~--~-~-~~w~i  343 (495)
T 3t6v_A          280 AILRYDGATTADPVTVASTVHTKC-------LI--ETDLHPLSRNGVPGNP---HQGGADCNLNLSLGF--A-C-GNFVI  343 (495)
T ss_dssp             EEEEETTSCSSCCCCCCCSSCSSB-------CC--GGGCCBSSCCCCSSCS---STTCSSEEEECCEEE--E-T-TEEEE
T ss_pred             EEEEECCCCCCCCCCCCCCCCccc-------cc--cccccccccccCCCcc---CCCCCcEEEEEEEEe--c-C-cEEEE
Confidence            99999875421110 000001011       00  1234444322222100   011356666654422  1 2 27999


Q ss_pred             cCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE-eCCCCcCceeecCCCeEEEEe
Q 020366          157 NGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ-NNEKTMQSWHLDGYDFWVVGY  235 (327)
Q Consensus       157 N~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~-N~~~~~HP~HLHG~~F~Vl~~  235 (327)
                      ||++|..++.|+|.+.+.   |.+....         .....+++.++.|++|||+|+ |.....||||||||+|+||++
T Consensus       344 Ng~s~~~~~~P~L~~~~~---g~~~~~~---------~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~  411 (495)
T 3t6v_A          344 NGVSFTPPTVPVLLQICS---GANTAAD---------LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSES  411 (495)
T ss_dssp             TTBCCCCCSSCHHHHHHT---TCCSSTT---------SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEEC
T ss_pred             cCEecCCCCCcchhhhhc---CCcCccc---------ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEec
Confidence            999999989998866532   2221110         011245789999999999998 667789999999999999987


Q ss_pred             ccCCCCccccccCCCCCCCceeeEEeCC-CCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCC
Q 020366          236 GSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPS  314 (327)
Q Consensus       236 g~G~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~  314 (327)
                      + |      ...+|+.||+||||+.|++ +||++|||+|||||.|||||||++|+++||+++|. ..+ +.+++..++|+
T Consensus       412 ~-g------~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~-e~~-~~~~~~~~~p~  482 (495)
T 3t6v_A          412 A-S------NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFA-EDI-PNTASANPVPE  482 (495)
T ss_dssp             T-T------CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEE-ETH-HHHHHHCCCCH
T ss_pred             C-C------CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE-ECh-hHhccccCCCH
Confidence            5 3      1357889999999999997 89999999999999999999999999999998884 333 44433356787


Q ss_pred             chh-hccccCC
Q 020366          315 NIL-VCGKAVG  324 (327)
Q Consensus       315 ~~~-~C~~~~~  324 (327)
                      ++. .|.+|..
T Consensus       483 ~~~~~C~~~~~  493 (495)
T 3t6v_A          483 AWSNLCPSYDS  493 (495)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHhhHhhc
Confidence            765 9987753

>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7e-58  Score=450.74  Aligned_cols=291  Identities=24%  Similarity=0.296  Sum_probs=212.0

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCC-CCceEEEEEeccc-------CC
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQP-PKDYYIVASTRFT-------KN   72 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~-~~~y~ir~~~~~~-------~~   72 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||++++|+.+++|.|++||||||||++++. .++|||++.....       ..
T Consensus       189 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~  268 (534)
T 1zpu_A          189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDL  268 (534)
T ss_dssp             EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTC
T ss_pred             EEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCC
Confidence            899999999999999999999999999999999999999999999999999999864 5789999976422       12


Q ss_pred             CceeEEEEEecCCCCCCCCCCCCCCC-Ccccccccc-cccccccccccCCCCCCCCCCCCCCcCceEEEEEecccc-ccC
Q 020366           73 VLTATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQ-ARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAP-LIN  149 (327)
Q Consensus        73 ~~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~  149 (327)
                      .....++|+|.++..     .|..+. ..    +.. +.+  ..|.|....+.+        ..+++++.+...+. ..+
T Consensus       269 ~~~~~ail~y~~~~~-----~p~~~~~~~----~~~~~~~--~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~  329 (534)
T 1zpu_A          269 QLNATSYMVYNKTAA-----LPTQNYVDS----IDNFLDD--FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKN  329 (534)
T ss_dssp             CCEEEEEEESCTTSC-----BCCCCCCSC----SSCSCCG--GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTT
T ss_pred             CcceEEEEEeCCCCC-----CCCCCcccc----ccccccc--ccceeCCCCCCC--------CCCCeEEEEEEEeeccCC
Confidence            356789999987531     111110 01    111 111  123333222221        23567777765432 134


Q ss_pred             CeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCC
Q 020366          150 GKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYD  229 (327)
Q Consensus       150 g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~  229 (327)
                      +...|+|||++|..++.|+|.+.+.  .+.+..     .+.  ..+.+++++.++.|++|+|+|+|.+.+.||||||||+
T Consensus       330 ~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~~-----~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~  400 (534)
T 1zpu_A          330 GVNYAFFNNITYTAPKVPTLMTVLS--SGDQAN-----NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHA  400 (534)
T ss_dssp             SCEEEEETTBCCCCCSSCHHHHHTT--SGGGTT-----CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCC
T ss_pred             ceeEEEECCCcccCCCCCceeeecc--cCcccC-----CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCc
Confidence            5568999999999999998865432  111110     111  0112356789999999999999999999999999999


Q ss_pred             eEEEEeccC----------CCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          230 FWVVGYGSG----------QWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       230 F~Vl~~g~G----------~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      ||||+++.|          .|+...... +..+|+|||||.|+++||++|||+|||||.|||||||++|+++|||++|.+
T Consensus       401 F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~  479 (534)
T 1zpu_A          401 FQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVE  479 (534)
T ss_dssp             EEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred             eEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEE
Confidence            999999864          444332222 246899999999999999999999999999999999999999999999976


Q ss_pred             EcCccccccc--CCCCCchh-hcccc
Q 020366          300 WNAVHSLANE--YDIPSNIL-VCGKA  322 (327)
Q Consensus       300 ~~~~~~~~~~--~~~P~~~~-~C~~~  322 (327)
                      . + +.+++.  .++|+++. .|.++
T Consensus       480 ~-~-~~~~~~~~~~~p~~~~~~C~~~  503 (534)
T 1zpu_A          480 D-P-FGIQDAHSQQLSENHLEVCQSC  503 (534)
T ss_dssp             C-H-HHHHHCGGGSCCHHHHHHHHHT
T ss_pred             C-c-cccccccccCCChhHhhhhhcc
Confidence            4 2 234333  56787765 66444

>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3

Probab=100.00  E-value=1.1e-56  Score=441.36  Aligned_cols=288  Identities=20%  Similarity=0.258  Sum_probs=209.5

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC---CceeE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~---~~~~~   77 (327)
                      ||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++.......   .....
T Consensus       223 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~  302 (521)
T 1v10_A          223 RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINS  302 (521)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred             EEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCcee
Confidence            899999999999999999999999999999999999999999999999999999987789999998653211   11236


Q ss_pred             EEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEc
Q 020366           78 AILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVN  157 (327)
Q Consensus        78 ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN  157 (327)
                      |+|+|.+.....+...+. +..+++         +.+|.+....+.|...   .....++++.+...+  .++...|+||
T Consensus       303 ail~y~~~~~~~p~~~~~-~~~~~~---------~~~l~p~~~~~~p~~~---~~~~~~~~~~l~~~~--~~~~~~~~iN  367 (521)
T 1v10_A          303 AIFRYQGAAVAEPTTSQN-SGTALN---------EANLIPLINPGAPGNP---VPGGADINLNLRIGR--NATTADFTIN  367 (521)
T ss_dssp             EEEEETTCCSCCCCCCCC-CSCBCC---------GGGCCBSSCCCCSSCS---STTCSSEEEECCEEC--CSSSSCCEES
T ss_pred             EEEEECCCCCCCCCCCCC-cccccc---------hhhcccCCcccCCCcc---cCCcceEEEEEEEec--CCceeEEEEC
Confidence            999998764211111000 001110         0123333222222210   011345555554321  1122379999


Q ss_pred             CccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEecc
Q 020366          158 GISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGS  237 (327)
Q Consensus       158 ~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~  237 (327)
                      |++|..++.|+|.+.+.   |.++..         ..+.+++++.++.|++|||+++|  .+.||||||||+||||+++.
T Consensus       368 g~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~  433 (521)
T 1v10_A          368 GAPFIPPTVPVLLQILS---GVTNPN---------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPG  433 (521)
T ss_dssp             SCCCCCCSSCHHHHHHH---TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTT
T ss_pred             CCcccCCCCchhhhhhc---CCcccc---------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCC
Confidence            99999888888765431   111100         11124567899999999999999  78999999999999999985


Q ss_pred             CCCCccccccCCCCCCCceeeEEe-CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCc-
Q 020366          238 GQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSN-  315 (327)
Q Consensus       238 G~~~~~~~~~~n~~~p~~rDTv~v-p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~-  315 (327)
                      |.       .+|+.+|+|||||.| +++||++|||+|||||.|||||||++|+++|||++|.+.. .+ +++..++|+. 
T Consensus       434 ~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~-~~-~~~~~~~p~~~  504 (521)
T 1v10_A          434 SS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDI-PN-IPIANAISPAW  504 (521)
T ss_dssp             CS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESG-GG-HHHHSCCCHHH
T ss_pred             CC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECC-cc-hhhccCCChHH
Confidence            52       467889999999999 8999999999999999999999999999999999998753 22 3334556755 


Q ss_pred             hhhccccCCCC
Q 020366          316 ILVCGKAVGHH  326 (327)
Q Consensus       316 ~~~C~~~~~~~  326 (327)
                      .+.|.+|....
T Consensus       505 ~~~C~~~~~~~  515 (521)
T 1v10_A          505 DDLCPKYNANN  515 (521)
T ss_dssp             HTHHHHHTTCC
T ss_pred             hhhchhhhccC
Confidence            56999887753

>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*

Probab=100.00  E-value=3.1e-56  Score=436.79  Aligned_cols=288  Identities=22%  Similarity=0.308  Sum_probs=208.7

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC-------C
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN-------V   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~-------~   73 (327)
                      ||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++.......       .
T Consensus       196 RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~  275 (503)
T 1hfu_A          196 RMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFAN  275 (503)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGG
T ss_pred             EEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCC
Confidence            899999999999999999999999999999999999999999999999999999987789999998653211       1


Q ss_pred             ceeEEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeE
Q 020366           74 LTATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKL  152 (327)
Q Consensus        74 ~~~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~  152 (327)
                      ....++|+|.+.....+. .+..|. .+++         ..+|.+....+.|....   ....++++.+....   ++. 
T Consensus       276 ~~~~ail~y~~~~~~~p~-~~~~~~~~~l~---------~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~~---~~~-  338 (503)
T 1hfu_A          276 GVNSAILRYAGAANADPT-TSANPNPAQLN---------EADLHALIDPAAPGIPT---PGAADVNLRFQLGF---SGG-  338 (503)
T ss_dssp             GTTEEEEEETTSCSSCCC-CCCCSSCCBCC---------GGGCBBSSSCSCSSCSS---TTCSSEEEECCEEE---ETT-
T ss_pred             CceEEEEEECCCCCCCCC-CCCCCccCCCc---------cccccccCccCCCCccc---CCcceEEEEEEeec---cCc-
Confidence            123699999876421110 000111 1111         01233332222222100   01234555443211   122 


Q ss_pred             EEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEe-CCCCcCceeecCCCeE
Q 020366          153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQN-NEKTMQSWHLDGYDFW  231 (327)
Q Consensus       153 ~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N-~~~~~HP~HLHG~~F~  231 (327)
                      .|+|||++|..++.|+|.+.+.   |.++..         ..+.+++++.++.|++|||+++| ...+.||||||||+|+
T Consensus       339 ~~~iNg~~~~~~~~P~l~~~~~---g~~~~~---------~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~  406 (503)
T 1hfu_A          339 RFTINGTAYESPSVPTLLQIMS---GAQSAN---------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS  406 (503)
T ss_dssp             EEEETTBCCCCCSSCHHHHHHT---TCCSGG---------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEE
T ss_pred             eEEECCCccCCCCCcchhhhhc---CCcccc---------cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEE
Confidence            7999999999888888765432   211100         11224577899999999999995 5578999999999999


Q ss_pred             EEEeccCCCCccccccCCCCCCCceeeEEe-CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcccccccC
Q 020366          232 VVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEY  310 (327)
Q Consensus       232 Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~  310 (327)
                      ||+++.|.       .+|+.+|+|||||.| +++||++|||+|||||.|||||||++|+++|||++|.+... + +++..
T Consensus       407 Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~-~-~~~~~  477 (503)
T 1hfu_A          407 VVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMA-N-TVDAN  477 (503)
T ss_dssp             EEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHH-H-HHHHC
T ss_pred             EEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECch-h-hhhcc
Confidence            99998552       467889999999999 99999999999999999999999999999999999987532 2 32335


Q ss_pred             CCCCc-hhhccccCCCC
Q 020366          311 DIPSN-ILVCGKAVGHH  326 (327)
Q Consensus       311 ~~P~~-~~~C~~~~~~~  326 (327)
                      ++|++ .+.|.+|...+
T Consensus       478 ~~p~~~~~~C~~~~~~~  494 (503)
T 1hfu_A          478 NPPVEWAQLCEIYDDLP  494 (503)
T ss_dssp             CCCHHHHHHHHHHHTCC
T ss_pred             CCChHHhhhccchhhcC
Confidence            56755 56999887643

>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*

Probab=100.00  E-value=4.4e-56  Score=440.38  Aligned_cols=295  Identities=20%  Similarity=0.262  Sum_probs=209.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe--cc-c--CCCce
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST--RF-T--KNVLT   75 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~--~~-~--~~~~~   75 (327)
                      ||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||||++++++|+||||+..  .. +  .....
T Consensus       226 RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~  305 (559)
T 2q9o_A          226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPH  305 (559)
T ss_dssp             EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSC
T ss_pred             EEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCc
Confidence            8999999999999999999999999999999999999999999999999999999877899999986  31 1  12335


Q ss_pred             eEEEEEecCCCCCCCCCCCCCCC-CcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEE
Q 020366           76 ATAILHYTNSHSPASGPLPTGPT-YEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRY  154 (327)
Q Consensus        76 ~~ail~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  154 (327)
                      ..|+|+|.+....    +|..+. ...+   ..|.+. ..|.|..+.+.|....   ....++++.+.... ...+...|
T Consensus       306 ~~ail~y~~~~~~----~P~~~~~~~~~---~~~~~~-~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~  373 (559)
T 2q9o_A          306 PAAIFHYAGAPGG----LPTDEGTPPVD---HQCLDT-LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVW  373 (559)
T ss_dssp             CEEEEEETTSCCS----CCCCCCCCCCC---CTTCCC-SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEE
T ss_pred             eeEEEEECCCCCC----CCCCCCCcCCC---cccccc-cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEE
Confidence            6899999875421    111110 0000   001111 1233332222222110   01123344443211 12345689


Q ss_pred             EEcCccCcC-CCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecC-CcEEEEEEEeCC----CCcCceeecCC
Q 020366          155 AVNGISYVN-SDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNL-HEYIEVVFQNNE----KTMQSWHLDGY  228 (327)
Q Consensus       155 ~iN~~~~~~-~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~ivi~N~~----~~~HP~HLHG~  228 (327)
                      +|||++|.. +..|+|.+...+..         ..|      .+.+++.++. ++|++|+|+|.+    .+.||||||||
T Consensus       374 ~iNg~s~~~~~~~P~L~~~~~g~~---------~~~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh  438 (559)
T 2q9o_A          374 KVNGSDINVDWGKPIIDYILTGNT---------SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGH  438 (559)
T ss_dssp             EETTBCCCCCTTSCHHHHHHHTCC---------CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSS
T ss_pred             EECCEecccCCCCCcHhHhhcCCc---------cCC------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCC
Confidence            999999974 57787754321110         011      2456677765 578888999976    78999999999


Q ss_pred             CeEEEEecc---------CCCCcc-ccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEE
Q 020366          229 DFWVVGYGS---------GQWAAE-KRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLK  298 (327)
Q Consensus       229 ~F~Vl~~g~---------G~~~~~-~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~  298 (327)
                      +||||++|.         |.|++. ....+|+.+|+|||||.|+++||++|||+|||||.|||||||++|+++|||++|.
T Consensus       439 ~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~  518 (559)
T 2q9o_A          439 DFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFL  518 (559)
T ss_dssp             CEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEE
T ss_pred             ceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEE
Confidence            999999997         778753 1346789999999999999999999999999999999999999999999999997


Q ss_pred             EEcCcccccccCCC--CCch-hhccccCC
Q 020366          299 VWNAVHSLANEYDI--PSNI-LVCGKAVG  324 (327)
Q Consensus       299 v~~~~~~~~~~~~~--P~~~-~~C~~~~~  324 (327)
                      +. +++ +++..++  |+++ ++|.+|..
T Consensus       519 v~-~~~-~~~~~~~~~p~~~~~~C~~~~~  545 (559)
T 2q9o_A          519 ER-PAD-LRQRISQEDEDDFNRVCDEWRA  545 (559)
T ss_dssp             EC-HHH-HGGGCCHHHHHHHHHHHHHHHH
T ss_pred             EC-cch-hhhccccCCchhhhhhcccccc
Confidence            74 223 3333444  6654 69987753

>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A

Probab=100.00  E-value=1.3e-51  Score=397.94  Aligned_cols=223  Identities=19%  Similarity=0.221  Sum_probs=177.0

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC--------
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK--------   71 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~--------   71 (327)
                      ||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.+++|.|++||||||+|++++ +|+|||++......        
T Consensus       198 RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~  276 (439)
T 2xu9_A          198 RLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMG  276 (439)
T ss_dssp             EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSS
T ss_pred             EEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccc
Confidence            89999999999999999999999999999997 899999999999999999999998 68899998643211        


Q ss_pred             ----------CCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEE
Q 020366           72 ----------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVL  141 (327)
Q Consensus        72 ----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~  141 (327)
                                ......++|+|.+...  +.++|.                  .+.+....+.+         ..++++.+
T Consensus       277 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~p~------------------~l~~~~~l~~~---------~~~r~~~l  327 (439)
T 2xu9_A          277 GMAHAMPQGPSRPETLLYLIAPKNPK--PLPLPK------------------ALSPFPTLPAP---------VVTRRLVL  327 (439)
T ss_dssp             SCCEEEECCSCCCEEEEEEEECSSCC--CCCCCS------------------CCCCCCCCCCC---------SEEEEEEE
T ss_pred             cccccccCCCCCcceeEEEEecCCCc--cccCcc------------------cCCCcccCCCC---------CcceEEEE
Confidence                      1125678899976531  112221                  11111111111         23477777


Q ss_pred             eccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcC
Q 020366          142 ANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ  221 (327)
Q Consensus       142 ~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H  221 (327)
                      ...+   .+ ..|+|||++|..+..+                                 +.++.|++++|+|+|.+.+.|
T Consensus       328 ~~~~---~g-~~~~iNg~~~~~~~~~---------------------------------~~~~~g~~~~~~~~N~~~~~H  370 (439)
T 2xu9_A          328 TEDM---MA-ARFFINGQVFDHRRVD---------------------------------LKGQAQTVEVWEVENQGDMDH  370 (439)
T ss_dssp             EEEG---GG-TEEEETTBCCCTTCCC---------------------------------EEECTTCEEEEEEEECSSSCE
T ss_pred             Eeec---cC-ceEeECCEECCCCCCc---------------------------------eecCCCCEEEEEEEcCCCCCC
Confidence            6532   11 3799999999742211                                 467899999999999999999


Q ss_pred             ceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          222 SWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       222 P~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |||||||+||||+++.+.          +.+|+|||||.|+++||++|||++||||.|||||||++|++.|||+.++|+
T Consensus       371 P~HLHG~~F~Vl~~~g~~----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg  439 (439)
T 2xu9_A          371 PFHLHVHPFQVLSVGGRP----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG  439 (439)
T ss_dssp             EEEESSCCBEEEEETTEE----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred             CceeCCCcEEEEeeCCCC----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence            999999999999998542          346999999999999999999999999999999999999999999999874

>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*

Probab=100.00  E-value=2.4e-49  Score=389.49  Aligned_cols=239  Identities=13%  Similarity=0.125  Sum_probs=178.2

Q ss_pred             CeeEEecCCCcEEEEEEeC-------CeEEEEEecCcc-ceeeEeeEEEEcCCceEEEEEEeCCCCC-ceEEEEEec--c
Q 020366            1 MFRISNVGLSTSFNFRIQG-------HTMKLVEVEGSH-TIQNIYDSLDVHVGQSVSVLVTLNQPPK-DYYIVASTR--F   69 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidg-------h~l~VIa~DG~~-v~P~~v~~l~l~~GqRydvlv~~~~~~~-~y~ir~~~~--~   69 (327)
                      ||||||+|+.+.|.|+|++       |+|+|||+||++ ++|+.+++|.|++||||||||++++.+| +|||++...  .
T Consensus       222 RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~  301 (534)
T 3abg_A          222 RFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIG  301 (534)
T ss_dssp             EEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSS
T ss_pred             EEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEecccccc
Confidence            8999999999999999987       999999999985 6899999999999999999999998555 699998531  1


Q ss_pred             c----CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccc
Q 020366           70 T----KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSA  145 (327)
Q Consensus        70 ~----~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  145 (327)
                      +    .......++|+|.....+........|               ..|.+.. .+.+.       ...++++.+... 
T Consensus       302 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P---------------~~L~~~~-~p~~~-------~~~~~~~~~~~~-  357 (534)
T 3abg_A          302 GIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP---------------ANLRDVP-FPSPT-------TNTPRQFRFGRT-  357 (534)
T ss_dssp             SCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---------------CCCCCCS-CCCCC-------CCCCEEEECSCC-
T ss_pred             ccccccCcCCcceeEEEecCCCCcCCCCCCCc---------------cccccCC-CCCCc-------cccceEEEEecc-
Confidence            1    111245689999754321000000001               1122211 01111       134666665421 


Q ss_pred             cccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC-CcCcee
Q 020366          146 PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK-TMQSWH  224 (327)
Q Consensus       146 ~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~H  224 (327)
                         +  ..|+|||++|..+..|++                               +.++.|++++|+|+|.+. +.||||
T Consensus       358 ---~--~~w~iNG~~f~~~~~p~l-------------------------------~~v~~G~~~~w~i~N~~~~~~HP~H  401 (534)
T 3abg_A          358 ---G--PTWTINGVAFADVQNRLL-------------------------------ANVPVGTVERWELINAGNGWTHPIH  401 (534)
T ss_dssp             ---C--STTCCCCBTTBCTTSCCC-------------------------------CEECTTCEEEEEEEECSSSCCCCEE
T ss_pred             ---C--ceeEECCcccCCCCCcce-------------------------------eeccCCCEEEEEEEcCCCCCCcCEE
Confidence               1  269999999976544432                               246789999999999874 699999


Q ss_pred             ecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          225 LDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       225 LHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      ||||+|+||+++.|.+..   ..+++++ .|||||.|++++|++|||+ +||||.|||||||++|++.|||+.|.|...+
T Consensus       402 LHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~  477 (534)
T 3abg_A          402 IHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP  477 (534)
T ss_dssp             ESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred             ECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence            999999999997664421   1345566 8999999999999999998 9999999999999999999999999987543

>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A

Probab=100.00  E-value=1.5e-47  Score=376.04  Aligned_cols=242  Identities=12%  Similarity=0.136  Sum_probs=172.8

Q ss_pred             CeeEEecCCCcEEEEEEeCC-eEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEec-cc--C-CCc
Q 020366            1 MFRISNVGLSTSFNFRIQGH-TMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTR-FT--K-NVL   74 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh-~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~-~~--~-~~~   74 (327)
                      ||||||+|+.+.+.|+|+|| +|+|||+||+++ +|+.+++|.|++||||||||++++.+|. |+++... .+  . ...
T Consensus       251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~  329 (513)
T 2wsd_A          251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGE-SIILANSAGCGGDVNPE  329 (513)
T ss_dssp             EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTC-EEEEEECCCSSSSCCTT
T ss_pred             EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCc-EEEEEecccccccCCCC
Confidence            89999999999999999999 999999999998 8999999999999999999999985565 3333322 11  1 112


Q ss_pred             eeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEE
Q 020366           75 TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRY  154 (327)
Q Consensus        75 ~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  154 (327)
                      ...++|+|..............|.               .|.+....+..       ....++++.+...+. ..|...|
T Consensus       330 ~~~~il~~~~~~~~~~~~~~~~p~---------------~l~~~~~~~~~-------~~~~~~~~~l~~~~~-~~g~~~~  386 (513)
T 2wsd_A          330 TDANIMQFRVTKPLAQKDESRKPK---------------YLASYPSVQHE-------RIQNIRTLKLAGTQD-EYGRPVL  386 (513)
T ss_dssp             TTTEEEEEECCSCCSSCCCCCCCS---------------BCSCCGGGCCC-------CEEEEEEEEEEEEEC-TTSCEEE
T ss_pred             CCcceEEEEeccCcccCccCCCCc---------------cccCCCCcccC-------CCcceEEEEEEeecC-CCCCceE
Confidence            345889997543111000001111               01110000100       113456666654322 2345679


Q ss_pred             EEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEE
Q 020366          155 AVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVG  234 (327)
Q Consensus       155 ~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~  234 (327)
                      +|||++|..+.                                  .+.++.|++++|+|+|.+.+.||||||||+||||+
T Consensus       387 ~iNg~~~~~~~----------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~  432 (513)
T 2wsd_A          387 LLNNKRWHDPV----------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLD  432 (513)
T ss_dssp             EETTBCTTSCC----------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEE
T ss_pred             eECCccCCCcc----------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEE
Confidence            99999986421                                  02457899999999999999999999999999999


Q ss_pred             eccC---CCCccccccCCCCC---------CCceeeEEeCCCCEEEEEEEe-cCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366          235 YGSG---QWAAEKRRTYNLAD---------TLTRHTAQVYPQSWTVILVSL-DNQGMWNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       235 ~g~G---~~~~~~~~~~n~~~---------p~~rDTv~vp~~g~~virf~a-dnpG~W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      ++.+   .|+..  ..+|+.+         +.|||||.|+++++++|+|++ ||||.|||||||++|++.|||+.++|..
T Consensus       433 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~  510 (513)
T 2wsd_A          433 RRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD  510 (513)
T ss_dssp             EEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred             ecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence            9742   22211  1223333         469999999999999998888 8999999999999999999999999875


Q ss_pred             C
Q 020366          302 A  302 (327)
Q Consensus       302 ~  302 (327)
                      +
T Consensus       511 ~  511 (513)
T 2wsd_A          511 P  511 (513)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A

Probab=100.00  E-value=2.9e-47  Score=368.34  Aligned_cols=223  Identities=15%  Similarity=0.171  Sum_probs=169.2

Q ss_pred             CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc--------
Q 020366            1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT--------   70 (327)
Q Consensus         1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~--------   70 (327)
                      ||||||+|+.+.+.|+| |||+|+|||+||+++ +|+.+++|.|++||||||+|++++ +++|||++.....        
T Consensus       203 RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~  281 (451)
T 2uxt_A          203 RLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGF  281 (451)
T ss_dssp             EEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEEC-------------
T ss_pred             EEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccc
Confidence            89999999999999999 899999999999997 899999999999999999999996 5789999865321        


Q ss_pred             ---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccc
Q 020366           71 ---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPL  147 (327)
Q Consensus        71 ---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  147 (327)
                         .......++|+|........ .....|               ..|.+....+.        ....++++.+.     
T Consensus       282 ~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~~L~~~~~~~~--------~~~~~~~~~l~-----  332 (451)
T 2uxt_A          282 FEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------MRLLPTEIMAG--------SPIRSRDISLG-----  332 (451)
T ss_dssp             ---CCCCSCCEEEEEEECSCCC-----CCC---------------SCSSSSCCCCC--------CCSEEEEEEEC-----
T ss_pred             cccCCCCCCcceEEEEecCCCcC-ccccCc---------------cccCCCCCCCC--------CCcceEEEEEe-----
Confidence               01123467888875431110 000011               11222211111        12345666553     


Q ss_pred             cCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecC
Q 020366          148 INGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDG  227 (327)
Q Consensus       148 ~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG  227 (327)
                        +  .|+|||++|..++.                                 .+.++.|++++|+|+|.  +.|||||||
T Consensus       333 --~--~~~iNg~~f~~~~~---------------------------------~~~~~~G~~~~~~l~N~--~~HP~HLHG  373 (451)
T 2uxt_A          333 --D--DPGINGQLWDVNRI---------------------------------DVTAQQGTWERWTVRAD--EPQAFHIEG  373 (451)
T ss_dssp             --S--SSSBTTBCCCTTCC---------------------------------CEEEETTCEEEEEEEEE--EEEEEEETT
T ss_pred             --e--EEEECCEeCCCCCC---------------------------------cEEcCCCCEEEEEEECC--CCcCeEECC
Confidence              1  58999999874211                                 14678999999999998  799999999


Q ss_pred             CCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee----eEEEeeehhhhccCceEEEEEEcC
Q 020366          228 YDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM----WNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       228 ~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~----W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      |+|+||+++ |.       .+++.+|.|||||.|  +++++|+|++||||.    |||||||++|++.|||+.|.|...
T Consensus       374 h~F~Vl~~~-G~-------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~  442 (451)
T 2uxt_A          374 VMFQIRNVN-GA-------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPV  442 (451)
T ss_dssp             CEEEEEEET-TB-------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECS
T ss_pred             ceEEEEeeC-Cc-------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccC
Confidence            999999997 42       245667999999999  899999999999988    999999999999999999998754

>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}

Probab=100.00  E-value=2e-46  Score=376.14  Aligned_cols=261  Identities=11%  Similarity=0.073  Sum_probs=162.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCe-------EEEEEecCccc-eeeEee------EEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHT-------MKLVEVEGSHT-IQNIYD------SLDVHVGQSVSVLVTLNQPPKDYYIVAS   66 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~-------l~VIa~DG~~v-~P~~v~------~l~l~~GqRydvlv~~~~~~~~y~ir~~   66 (327)
                      ||||||+|+.+.|.|+|++|+       |+|||+||+++ +|++++      +|.|++||||||||++++..+.++....
T Consensus       275 RlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~  354 (612)
T 3gyr_A          275 RLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVD  354 (612)
T ss_dssp             EEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEE
T ss_pred             EEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEe
Confidence            899999999999999999994       99999999998 477664      8999999999999999987665444333


Q ss_pred             ec-ccC-------CCceeEEEEEecCCCC--CCCCCCCCCCCCcccccccccccccc--cccccCCCCCCCCCCCCCCcC
Q 020366           67 TR-FTK-------NVLTATAILHYTNSHS--PASGPLPTGPTYEIHWSMKQARTFRW--NLTANAARPNPQGSFHYGKIN  134 (327)
Q Consensus        67 ~~-~~~-------~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~~~~~~~~~~~~~--~l~~~~~~~~p~~~~~~~~~~  134 (327)
                      .. ...       ......++++|.....  +.+..+|........ ...  ..++.  .+..... +....     ...
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~--~~~~~~~~~~~~~~-~~~~~-----~~~  425 (612)
T 3gyr_A          355 KGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFR-RMS--HDIPHGHRLIVLTP-PGTKG-----SGG  425 (612)
T ss_dssp             CCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCC-CCC--TTSCCEEEEEEEEC-TTCTT-----TTT
T ss_pred             cCCcCCcCccCccccccccceeeecccCCCCCCccccccccccccc-ccc--cccccccccccccc-ccccc-----ccc
Confidence            22 111       1123445666653321  111112110000000 000  00000  0000000 00000     000


Q ss_pred             ceEEEEEeccc----------------cccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCccee
Q 020366          135 TTRTIVLANSA----------------PLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVAT  198 (327)
Q Consensus       135 ~~~~~~~~~~~----------------~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  198 (327)
                      ......+....                ........|.+|+..|.                                  +.
T Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~----------------------------------~~  471 (612)
T 3gyr_A          426 HPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN----------------------------------DG  471 (612)
T ss_dssp             CCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT----------------------------------SC
T ss_pred             cccccccccccccccccccccceeeeccCCCccccccccCccCC----------------------------------CC
Confidence            00000000000                00001122333333322                                  12


Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc----------------ccccCCCCCCCceeeEEeC
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------------KRRTYNLADTLTRHTAQVY  262 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~----------------~~~~~n~~~p~~rDTv~vp  262 (327)
                      ..+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+...                .....+..++.|||||.|+
T Consensus       472 ~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~  551 (612)
T 3gyr_A          472 LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP  551 (612)
T ss_dssp             CCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred             cceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence            236789999999999999999999999999999999874433211                0123456778999999999


Q ss_pred             CCCEEEEEEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          263 PQSWTVILVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       263 ~~g~~virf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      ++||++|||+ +||||.|||||||++|+++|||+.|+|..++.
T Consensus       552 ~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~  594 (612)
T 3gyr_A          552 GPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA  594 (612)
T ss_dssp             SSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred             CCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence            9999999998 89999999999999999999999999987754

>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}

Probab=100.00  E-value=9.2e-47  Score=364.37  Aligned_cols=226  Identities=17%  Similarity=0.221  Sum_probs=170.4

Q ss_pred             CeeEEecCCCcEEEEEE--eC---CeEEEEEecCccce-eeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc--C-
Q 020366            1 MFRISNVGLSTSFNFRI--QG---HTMKLVEVEGSHTI-QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT--K-   71 (327)
Q Consensus         1 RlRliNa~~~~~~~~si--dg---h~l~VIa~DG~~v~-P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~--~-   71 (327)
                      ||||||+|+.+.+.|+|  +|   |+|+|||+||++++ |+.+++|.|++||||||+|++++  +.|||++.....  . 
T Consensus       190 RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~  267 (448)
T 3aw5_A          190 RLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLE  267 (448)
T ss_dssp             EEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCT
T ss_pred             EEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCc
Confidence            89999999999999999  99   99999999999998 99999999999999999999983  689999875421  0 


Q ss_pred             -----------CCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEE
Q 020366           72 -----------NVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIV  140 (327)
Q Consensus        72 -----------~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~  140 (327)
                                 ......++|+|.+....     +. |.               .|.+.++.+.        ....++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-p~---------------~L~~lp~~~~--------~~~~~~~~~  318 (448)
T 3aw5_A          268 MGHGMQEALPEGSEYTIATFLVEGKGEA-----VP-VE---------------ALSDPPPEPP--------KPTRTRRFA  318 (448)
T ss_dssp             TSSCCCCSSCTTSCEEEEEEEEEEECCC-----CC-CC---------------CCSCCCCCCC--------CCSEEEEEE
T ss_pred             cccccccccCCCCCceEEEEEEcCCCCC-----CC-cc---------------ccCCCCCCCC--------CCCceEEEE
Confidence                       11245677888654311     11 11               0111111011        123567777


Q ss_pred             EeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEE-ecCCcEEEEEEEeCC-C
Q 020366          141 LANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQ-VNLHEYIEVVFQNNE-K  218 (327)
Q Consensus       141 ~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~~v~ivi~N~~-~  218 (327)
                      +....      ..|+|||++|... .|+                                +. ++.|++|+|+|+|.+ .
T Consensus       319 l~~~~------~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~~v~~~i~N~~~~  359 (448)
T 3aw5_A          319 LSLSG------MQWTINGMFWNAS-NPL--------------------------------FEHVSVEGVELWEIVNDKAS  359 (448)
T ss_dssp             EEEET------TEEEETTBCCCTT-CTT--------------------------------CCCEEECEEEEEEEEECSSS
T ss_pred             EeCCC------ceeeECCCcCCCC-CCc--------------------------------eeccCCCCeEEEEEEcCCCC
Confidence            76421      2599999999742 111                                23 678999999999998 8


Q ss_pred             CcCceeecCCCeEEEEeccCCCCc-cccccCC----CCCCCceeeEEeCCCCEEEEE--EE---ecCCeeeEEEeeehhh
Q 020366          219 TMQSWHLDGYDFWVVGYGSGQWAA-EKRRTYN----LADTLTRHTAQVYPQSWTVIL--VS---LDNQGMWNMRSAIWER  288 (327)
Q Consensus       219 ~~HP~HLHG~~F~Vl~~g~G~~~~-~~~~~~n----~~~p~~rDTv~vp~~g~~vir--f~---adnpG~W~~HCHi~~h  288 (327)
                      +.||||||||+||||+++ |.+.. .....+|    ..++.|||||.|+++|+++|+  |+   +|||  |||||||++|
T Consensus       360 ~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H  436 (448)
T 3aw5_A          360 MPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEH  436 (448)
T ss_dssp             CCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHH
T ss_pred             CCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHH
Confidence            999999999999999996 65531 1112222    234579999999999999655  99   9999  9999999999


Q ss_pred             hccCceEEEEE
Q 020366          289 QYLGQQFYLKV  299 (327)
Q Consensus       289 ~~~Gm~~~~~v  299 (327)
                      ++.|||+.|+|
T Consensus       437 ~d~GMm~~~~V  447 (448)
T 3aw5_A          437 EDGGMMINIAV  447 (448)
T ss_dssp             HHTTCEEEEEE
T ss_pred             HhCCCceEEEe
Confidence            99999999987

>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.6e-44  Score=350.03  Aligned_cols=231  Identities=18%  Similarity=0.197  Sum_probs=168.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCcc-ceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CCc
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSH-TIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NVL   74 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~-v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~~   74 (327)
                      ||||||+|+.+.|.|+|+||+|+|||+||++ ++|+.+++|.|++||||||||++++ .+.|.|++......     ...
T Consensus       231 RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~  309 (481)
T 3zx1_A          231 RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEP  309 (481)
T ss_dssp             EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCC
T ss_pred             EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCC
Confidence            8999999999999999999999999999877 5899999999999999999999986 56788877533210     011


Q ss_pred             eeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccC-----
Q 020366           75 TATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLIN-----  149 (327)
Q Consensus        75 ~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----  149 (327)
                      ....++++....  .+..+|.                  .|.+.+..+.         ...++++.+...+....     
T Consensus       310 ~~~~~~~~~~~~--~~~~lP~------------------~l~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~  360 (481)
T 3zx1_A          310 NTLFLANINLKK--ENVELPK------------------NLKIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGK  360 (481)
T ss_dssp             CCEEEEEEEEEC--CCCCCCS------------------CSCCCCCCCC---------CCEEEEEEEEECCSTTTTGGGC
T ss_pred             CceeEEEEecCC--CCccCCc------------------cccCCCCCCC---------CCcEEEEEEeccchhccccccc
Confidence            233344433221  1112221                  1111111111         12466676654221000     


Q ss_pred             Ce--------EEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcC
Q 020366          150 GK--------LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQ  221 (327)
Q Consensus       150 g~--------~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H  221 (327)
                      +.        ..|+|||+.|... .|                                .+.++.|++|+|+|.|.+.+.|
T Consensus       361 ~~~~~~~~~~~~~~iNG~~~~~~-~~--------------------------------~~~~~~G~~v~w~l~N~~~~~H  407 (481)
T 3zx1_A          361 SEGELKIALASMFLINRKSYDLK-RI--------------------------------DLSSKLGVVEDWIVINKSHMDH  407 (481)
T ss_dssp             CHHHHHHHHHTTEEETTBCCCTT-CC--------------------------------CEEEETTCCEEEEEEECSSSCE
T ss_pred             ccccccccccceeEECCEeCCCC-Cc--------------------------------eEEeCCCCEEEEEEEcCCCCce
Confidence            11        1499999988631 11                                1568899999999999999999


Q ss_pred             ceeecCCCeEEEEec-cCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          222 SWHLDGYDFWVVGYG-SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       222 P~HLHG~~F~Vl~~g-~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |||||||.|+|++++ .|.       .....++.|||||.|+|+++++|+|++||||.||||||+++|++.|||..|+|.
T Consensus       408 p~HlHG~~F~vl~~~~~g~-------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~  480 (481)
T 3zx1_A          408 PFHIHGTQFELISSKLNGK-------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK  480 (481)
T ss_dssp             EEEETTCCEEEEEEEETTE-------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred             eEEEeccEEEEEEecccCC-------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence            999999999999983 232       111234899999999999999999999999999999999999999999999986


Q ss_pred             c
Q 020366          301 N  301 (327)
Q Consensus       301 ~  301 (327)
                      |
T Consensus       481 ~  481 (481)
T 3zx1_A          481 E  481 (481)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...

Probab=100.00  E-value=6.8e-43  Score=338.75  Aligned_cols=231  Identities=18%  Similarity=0.236  Sum_probs=161.0

Q ss_pred             CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CC
Q 020366            1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NV   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~   73 (327)
                      ||||||+|+.+.|.|+| |||+|+|||+||+++ +|+++++|.|++||||||||++++ .+.|+|++......     ..
T Consensus       204 RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~  282 (488)
T 3od3_A          204 RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPF  282 (488)
T ss_dssp             EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTT
T ss_pred             EEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccc
Confidence            89999999999999999 699999999999986 899999999999999999999996 56799987643221     00


Q ss_pred             ceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecc---------
Q 020366           74 LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANS---------  144 (327)
Q Consensus        74 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~---------  144 (327)
                      .....+++......+.+..+|.                  .|.+.+..  |.     .....+|++.+...         
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~P~------------------~L~~~~~~--~~-----~~~~~~r~~~l~~~~~~~~~~~~  337 (488)
T 3od3_A          283 DKPHPVMRIQPIAISASGALPD------------------TLSSLPAL--PS-----LEGLTVRKLQLSMDPMLDMMGMQ  337 (488)
T ss_dssp             TSCEEEEEEEEEEEECCCCCCS------------------CCCCCCCC--CC-----CTTCCEEEEEEEECHHHHHHHHH
T ss_pred             cCccceeEecccccCCCCCCCc------------------ccccCCCC--cc-----cccccceEEEEEecccccccccc
Confidence            1122233332111001111111                  11111110  10     00123555555321         


Q ss_pred             ----------cc-c---------cCCe-------------EEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCC
Q 020366          145 ----------AP-L---------INGK-------------LRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSG  191 (327)
Q Consensus       145 ----------~~-~---------~~g~-------------~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~  191 (327)
                                +. .         ..|.             ..|+|||++|... .|                        
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~-~~------------------------  392 (488)
T 3od3_A          338 MLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN-KP------------------------  392 (488)
T ss_dssp             HHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT-CC------------------------
T ss_pred             cccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC-CC------------------------
Confidence                      00 0         0110             1389999998631 11                        


Q ss_pred             CCCcceeeEEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366          192 GASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL  270 (327)
Q Consensus       192 ~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir  270 (327)
                              .+.++.|++++|.|.|.+ .+.|||||||++|+|++++....        ...++.|||||.|+ ++++.|+
T Consensus       393 --------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~~kDTV~v~-g~~~~i~  455 (488)
T 3od3_A          393 --------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVKVE-GNVSEVL  455 (488)
T ss_dssp             --------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBSEEEES-SSEEEEE
T ss_pred             --------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcc--------ccccCCceeEEEeC-CCEEEEE
Confidence                    146789999999999988 67999999999999999963211        12246899999999 9999999


Q ss_pred             EEe----cCCeeeEEEeeehhhhccCceEEEEE
Q 020366          271 VSL----DNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       271 f~a----dnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |++    +|||.||||||+++|++.|||..|+|
T Consensus       456 ~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V  488 (488)
T 3od3_A          456 VKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV  488 (488)
T ss_dssp             ECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred             EEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence            997    45789999999999999999999975

>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}

Probab=99.95  E-value=1.8e-28  Score=237.07  Aligned_cols=225  Identities=15%  Similarity=0.085  Sum_probs=145.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc-CC-CceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT-KN-VLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~-~~-~~~~~a   78 (327)
                      ||||+|++.. .+.++|+.|.+  ++.||.+      +.+.|+|||||++++++++ +|.||++...... .+ .....+
T Consensus       206 ~~rl~N~~~~-~~~~~ih~Hg~--~~~DG~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~~~~~Gl~g  275 (447)
T 2dv6_A          206 ELHLKNHKDS-LMVHSVDFHGA--TGPGGAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPTHITNGMYG  275 (447)
T ss_dssp             EEEEEECTTC-SSCBCCEETTC--CSGGGGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHHHHHTTCEE
T ss_pred             EEEEEeCCCC-ceeEEEeeccc--cCCCCCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHHHHhCCCEE
Confidence            7999999862 23345555654  4789984      2235999999999999987 5899999864210 00 012346


Q ss_pred             EEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEEcC
Q 020366           79 ILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNG  158 (327)
Q Consensus        79 il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~  158 (327)
                      .|.|.+..     .+|.   .+.+..+        .+..........         ......+............|+|||
T Consensus       276 ~l~v~~~~-----~~P~---~d~~~~~--------~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~iNG  330 (447)
T 2dv6_A          276 LLLVEPEG-----GLPQ---VDREFYV--------MQGEIYTVKSFG---------TSGEQEMDYEKLINEKPEYFLFNG  330 (447)
T ss_dssp             EEEEECTT-----CSCC---CSEEEEE--------EEEEECBSSCTT---------CCEECCBBHHHHHTTCCSEEEETT
T ss_pred             EEEEeCCC-----CCCC---CCeeEEE--------EecccccCCccc---------ccccccCChHHhhccCCCEEEECC
Confidence            67675432     1221   1111100        000000000000         000000110000001124689999


Q ss_pred             ccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEecc
Q 020366          159 ISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGS  237 (327)
Q Consensus       159 ~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~  237 (327)
                      +.+....                                ..++.++.|++++|+|.|.+ ...||||||||+|+||+++ 
T Consensus       331 ~~~~~~~--------------------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d-  377 (447)
T 2dv6_A          331 SVGSLTR--------------------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL-  377 (447)
T ss_dssp             STTCCCC--------------------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG-
T ss_pred             cccCCCC--------------------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC-
Confidence            8774210                                12367899999999999987 5789999999999999997 


Q ss_pred             CCCCccccccCCCCCCC-ceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366          238 GQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       238 G~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      |.+         +.+|. +|||+.|+++++++|+|++||||.|+||||+++|...||++.+.|..+
T Consensus       378 G~~---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~  434 (447)
T 2dv6_A          378 GSV---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGP  434 (447)
T ss_dssp             GCS---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSC
T ss_pred             Ccc---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCC
Confidence            421         22344 799999999999999999999999999999999999999999998643

>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}

Probab=99.95  E-value=1.9e-27  Score=221.77  Aligned_cols=94  Identities=11%  Similarity=0.127  Sum_probs=81.5

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe---cCCe
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL---DNQG  277 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a---dnpG  277 (327)
                      +.++.|++|+|+|.|.+...||||||||.|+|++.  |.+..      ....+.++||+.|++++++.++|.+   ||||
T Consensus       211 l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG  282 (343)
T 3cg8_A          211 FEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAG  282 (343)
T ss_dssp             EEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred             EEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCe
Confidence            67899999999999999899999999999999743  43321      1123678999999999999999995   8999


Q ss_pred             eeEEEeeehhhhccCceEEEEEEcC
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .|+||||+++|+++||+..|.|..+
T Consensus       283 ~w~~HCHi~~H~~~GM~g~~~V~~~  307 (343)
T 3cg8_A          283 AWMYHCHVQSHSDMGMVGLFLVKKP  307 (343)
T ss_dssp             EEEEEECSHHHHHTTCEEEEEEECT
T ss_pred             eEEEeCCCHHHHhccCcEEEEEecC
Confidence            9999999999999999999998754

>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}

Probab=99.94  E-value=1.8e-26  Score=215.07  Aligned_cols=218  Identities=16%  Similarity=0.187  Sum_probs=145.5

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEe---cCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc---C-CC
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEV---EGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT---K-NV   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~---DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~---~-~~   73 (327)
                      |+||+|.+..   ..+|..|-+.+++.   ||.+.    +....|+|||||++.+++++ +|.||..+.....   . ..
T Consensus        46 ~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~G  117 (339)
T 2zwn_A           46 IVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR-IGTLWYHCHVNVNEHVGVRG  117 (339)
T ss_dssp             EEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS-CEEEEEECCSSHHHHTTTSC
T ss_pred             EEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC-CEEEEEEecCCchhhhhcCC
Confidence            6899999864   36888888888886   99863    34456999999999999985 7899999765321   1 22


Q ss_pred             ceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEE
Q 020366           74 LTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLR  153 (327)
Q Consensus        74 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  153 (327)
                      +.+.-|+.  ... +  ..++.....++...+.   +  +.+.. ...+...      ..            . ......
T Consensus       118 l~G~liV~--p~~-~--~~~~~~~d~e~~l~l~---d--~~~~~-~~~~~~~------g~------------~-~~~~~~  167 (339)
T 2zwn_A          118 MWGPLIVD--PKQ-P--LPIEKRVTKDVIMMMS---T--WESAV-ADKYGEG------GT------------P-MNVADY  167 (339)
T ss_dssp             CEEEEEEE--CSS-C--CTTGGGCSEEEEEEEE---E--ECGGG-TTCTTCC------CS------------T-TSCCCE
T ss_pred             ceEeEEec--CCC-c--ccccccCCceEEEEee---h--eeccc-ccccCCC------CC------------C-ccccce
Confidence            33322332  221 0  0111100011100000   0  01100 0000000      00            0 001236


Q ss_pred             EEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEE
Q 020366          154 YAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV  233 (327)
Q Consensus       154 ~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl  233 (327)
                      |+|||+.|..                                  ..++.++.|++|+|+|.|.+...||||||||+|+|+
T Consensus       168 ~~ING~~~~~----------------------------------~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi  213 (339)
T 2zwn_A          168 FSVNAKSFPL----------------------------------TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVT  213 (339)
T ss_dssp             EEETTBCTTS----------------------------------SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEE
T ss_pred             EEEccccCCC----------------------------------cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEE
Confidence            8999976631                                  112578899999999999988899999999999999


Q ss_pred             EeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhh------hccCceEEEEEE
Q 020366          234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWER------QYLGQQFYLKVW  300 (327)
Q Consensus       234 ~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h------~~~Gm~~~~~v~  300 (327)
                      +.+.+          ++.+|.++||+.|++|+++.|+|++||||.|+||||++.|      ...||++.+.+.
T Consensus       214 ~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~  276 (339)
T 2zwn_A          214 HKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD  276 (339)
T ss_dssp             EETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEET
T ss_pred             EeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEEC
Confidence            99632          2234789999999999999999999999999999999998      678999988875

>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}

Probab=99.92  E-value=5.3e-25  Score=200.74  Aligned_cols=206  Identities=16%  Similarity=0.149  Sum_probs=137.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc----CCCcee
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT----KNVLTA   76 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~----~~~~~~   76 (327)
                      |+|+.|.... ...+++-|..  ..+.||.+-    +....|.|||+++.-+++++ +|.||........    ...+.+
T Consensus        77 ~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G  148 (288)
T 3gdc_A           77 RIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP-FGTHLYHCHQSPLAPHIAKGLYG  148 (288)
T ss_dssp             EEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEE
T ss_pred             EEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC-CccEEEEecCcchHHHHhCcCeE
Confidence            4678887643 4456666653  457888763    13356899999999999964 7899998765310    112223


Q ss_pred             EEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEeccccccCCeEEEEE
Q 020366           77 TAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAV  156 (327)
Q Consensus        77 ~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i  156 (327)
                        .|......     ..+  + .+-++.+        .+....                       .  ........|+|
T Consensus       149 --~liV~~~~-----~~~--~-~d~e~~l--------~~~d~~-----------------------~--~~g~~~~~~~i  185 (288)
T 3gdc_A          149 --GFIVEPKE-----GRP--P-ADDEMVM--------VMNGYN-----------------------T--DGGDDNEFYSV  185 (288)
T ss_dssp             --EEEEECSS-----CCC--C-CSEEEEE--------EEEEEC-----------------------C--SSTTCCSEEEE
T ss_pred             --EEEEeCCc-----cCC--C-CcceEEE--------EEeeEe-----------------------c--CCCCCcceEEE
Confidence              22222211     010  0 0101000        000000                       0  00001236899


Q ss_pred             cCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEE
Q 020366          157 NGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVG  234 (327)
Q Consensus       157 N~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~  234 (327)
                      ||+.|....                                 ..+.++.|++|+|.|.|.+..  .||||||||.|+|++
T Consensus       186 NG~~~~~~~---------------------------------~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~  232 (288)
T 3gdc_A          186 NGLPFHFMD---------------------------------FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP  232 (288)
T ss_dssp             TTSTTHHHH---------------------------------SCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE
T ss_pred             CcccccccC---------------------------------cccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc
Confidence            998874200                                 115778999999999999753  599999999999998


Q ss_pred             eccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366          235 YGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       235 ~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      .|.           .+..|.++||+.|++++++.|+|++++||.|+||||+++|++.|||..++|.+
T Consensus       233 ~g~-----------~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~  288 (288)
T 3gdc_A          233 TGT-----------MLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA  288 (288)
T ss_dssp             TTC-----------CSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred             CCC-----------ccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence            542           12346899999999999999999999999999999999999999999999863

>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*

Probab=99.92  E-value=7.6e-25  Score=198.49  Aligned_cols=97  Identities=10%  Similarity=0.123  Sum_probs=83.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec---CCe
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD---NQG  277 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad---npG  277 (327)
                      +.++.|++|+|+|.|.+...||||||||.|++++.  |.++.      ....+.++||+.|+++++..++|+++   |||
T Consensus       170 i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~------p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG  241 (276)
T 3kw8_A          170 FEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAG  241 (276)
T ss_dssp             EEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred             EEEecCCEEEEEEecCCCcceeEEEccceeEEecc--CccCC------CcccccCCccEEeCCCceEEEEEEeccCCCCC
Confidence            67899999999999998899999999999999764  43321      11235799999999999999999997   899


Q ss_pred             eeEEEeeehhhhccCceEEEEEEcCccc
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWNAVHS  305 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~~  305 (327)
                      .|+||||+++|++.||+..|+|.++++.
T Consensus       242 ~w~~HCH~~~H~~~GM~g~~~V~~~~~~  269 (276)
T 3kw8_A          242 AWMYHCHVQSHSDMGMVGLFLVKKPDGT  269 (276)
T ss_dssp             EEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred             eEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence            9999999999999999999999876553

>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*

Probab=99.89  E-value=4e-23  Score=190.41  Aligned_cols=111  Identities=12%  Similarity=0.041  Sum_probs=89.7

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE---ecCCe
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS---LDNQG  277 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~---adnpG  277 (327)
                      +.++.|++|+|+|.|.+...||||||||.|+|++.+...        .....|.++||+.|.|++...++|.   ++|||
T Consensus       176 l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG  247 (313)
T 3tas_A          176 FEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG  247 (313)
T ss_dssp             EEEETTCEEEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred             cccccCCEEEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE
Confidence            678899999999999999999999999999999876321        1234578999999999998877775   46999


Q ss_pred             eeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCch-hhccc
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNI-LVCGK  321 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~-~~C~~  321 (327)
                      .||||||+++|+++|||..|.|.+++..+  ....|.+. ..|-.
T Consensus       248 ~w~~HCHi~~H~~~GM~~~f~V~~~d~~~--p~~~p~~~~~~~~~  290 (313)
T 3tas_A          248 AWMYHCHVQSHSDMGMVGLFLVKKPDGTI--PGYDPHRHHHGAAS  290 (313)
T ss_dssp             EEEEEECSHHHHHTTCEEEEEEECTTCCC--TTCCTTCCBTTBCC
T ss_pred             eEEEEeCChHHHHCCCeEEEEEECCCCCC--CCCCcccccccccc
Confidence            99999999999999999999998776543  23345443 35543

>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}

Probab=99.89  E-value=1.4e-23  Score=192.24  Aligned_cols=96  Identities=19%  Similarity=0.197  Sum_probs=81.4

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEE---EEEEEecCCe
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWT---VILVSLDNQG  277 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~---virf~adnpG  277 (327)
                      +.++.|++|+|+|.|.+...||||||||.|+|+..+...        .....+.++||+.|.+++..   +++|++||||
T Consensus       192 l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~--------~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG  263 (299)
T 3t9w_A          192 FEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRT--------SEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG  263 (299)
T ss_dssp             EEEETTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCC--------STTCCCCEESEEECCTTCEEEEEEETTTTTCSE
T ss_pred             ceecCCCEEEEEEEeccccceeeeEecceEEEEeccccc--------CCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe
Confidence            678899999999999999999999999999998886432        12334678999999998754   5566778999


Q ss_pred             eeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      .||||||+++|++.||+..|+|.+.+.
T Consensus       264 ~w~~HCHi~~H~~~GM~~~f~V~~~~~  290 (299)
T 3t9w_A          264 MWMYHCHVQNHSDMGMAGMFLVRNADG  290 (299)
T ss_dssp             EEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred             eEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence            999999999999999999999986543

>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}

Probab=99.88  E-value=7.6e-23  Score=188.86  Aligned_cols=91  Identities=13%  Similarity=0.167  Sum_probs=81.3

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|++|+|+|.|.+...||||||||.|+|++++.+          .+.+|.++||+.|++++++.|+|++||||.|+
T Consensus       180 l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~----------~~~~p~~~dtv~l~pger~~v~~~a~~pG~w~  249 (318)
T 3g5w_A          180 IRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGF----------PLDKPIKGDTVLIGPGERYDVILNMDNPGLWM  249 (318)
T ss_dssp             EEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSEEE
T ss_pred             EEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCc----------ccCCCccccEEEECCCCEEEEEEECCCCeeEE
Confidence            57899999999999998889999999999999999632          22357899999999999999999999999999


Q ss_pred             EEeeehhhhc------cCceEEEEEEc
Q 020366          281 MRSAIWERQY------LGQQFYLKVWN  301 (327)
Q Consensus       281 ~HCHi~~h~~------~Gm~~~~~v~~  301 (327)
                      ||||+++|++      .||+..+.+..
T Consensus       250 ~hCH~~~H~~~g~~~~~Gm~~~i~~~g  276 (318)
T 3g5w_A          250 IHDHVDTHTTNGDKPDGGIMTTIEYEE  276 (318)
T ss_dssp             EEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred             EEeccHHHhhccCcCCCCCEEEEEECC
Confidence            9999999998      57888888753

>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*

Probab=99.87  E-value=2e-22  Score=212.42  Aligned_cols=89  Identities=10%  Similarity=0.237  Sum_probs=81.2

Q ss_pred             eEEEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC
Q 020366          199 SVMQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp  276 (327)
                      ..+.++.|++|+|+|.|.+  ...||||||||.|+|+++|                |.||||+.|+++++++|+|++|||
T Consensus       970 ~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~p 1033 (1065)
T 2j5w_A          970 QGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTP 1033 (1065)
T ss_dssp             CCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSC
T ss_pred             ccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCC
Confidence            3467899999999999985  5789999999999998653                679999999999999999999999


Q ss_pred             eeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          277 GMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       277 G~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      |.|+||||+++|++.|||+.|.|.+..
T Consensus      1034 G~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A         1034 GIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp             EEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred             eeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence            999999999999999999999997543

>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2

Probab=99.83  E-value=4.5e-20  Score=185.84  Aligned_cols=227  Identities=14%  Similarity=0.172  Sum_probs=130.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEE-EEecCccce---e-eEeeEEEEcCCceEEEEEEeCCC-----CC----ceEEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKL-VEVEGSHTI---Q-NIYDSLDVHVGQSVSVLVTLNQP-----PK----DYYIVAS   66 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~V-Ia~DG~~v~---P-~~v~~l~l~~GqRydvlv~~~~~-----~~----~y~ir~~   66 (327)
                      |+||.|.... ..  +|.-|-|.+ .+.||.+..   | ..+....|.|||+++..+++++.     +|    .||....
T Consensus        80 ~v~~~N~l~~-~~--siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH  156 (647)
T 1sdd_B           80 QVRFKNLASR-PY--SLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSA  156 (647)
T ss_dssp             EEEECCCSSS-CB--CCEEETCC---------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECC
T ss_pred             EEEEEECCCC-ce--EEecCcceeCCCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccC
Confidence            4788888753 33  444444444 688998742   2 23446679999999999999874     46    8999887


Q ss_pred             eccc---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEE-Ee
Q 020366           67 TRFT---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIV-LA  142 (327)
Q Consensus        67 ~~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~-~~  142 (327)
                      ....   ...+.+.-|++-.+.. ..   .+..|..+.+..+- +.++..+. ........           ...+. ..
T Consensus       157 ~~~~~q~~~GL~G~lIV~~~~~~-~~---~~~~~~~~~e~~l~-l~~~d~~~-~w~~~~~~-----------~~~~~~~~  219 (647)
T 1sdd_B          157 VNPEKDIHSGLIGPLLICRKGTL-DK---ETNMPVDMREFVLL-FMVFDEKK-SWYYDKKP-----------TRSWRRAS  219 (647)
T ss_dssp             SSHHHHHTTTCEEEEEEECTTSS-CT---TSCCCSSCCEEEEE-EEEEEGGG-SSCCC----------------------
T ss_pred             CCCcccccccCccCEEEeeCCCc-cc---ccCCCCcceeEEEE-EEeecCcc-ccccccCc-----------ccccccCC
Confidence            6321   1233443334322211 10   01112111111110 00000000 00000000           00000 00


Q ss_pred             ccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC--Cc
Q 020366          143 NSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK--TM  220 (327)
Q Consensus       143 ~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~--~~  220 (327)
                      ..  .......++|||+.|.   .|                                .+.++.|++|+|.|.|.+.  ..
T Consensus       220 ~~--~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vrlrliN~~~~~~~  262 (647)
T 1sdd_B          220 SE--VKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVRLHLLNLGGSRDI  262 (647)
T ss_dssp             ------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEEEEEEECCCTTCC
T ss_pred             cc--hhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEEEEEEeCCCCCcc
Confidence            00  0111246899998762   11                                1467889999999999874  48


Q ss_pred             CceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          221 QSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       221 HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      ||||+|||.|+|++.+                +.++||+.|.||+++.|+|++++||.|+||||+.+|+++||++.|.|.
T Consensus       263 h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~  326 (647)
T 1sdd_B          263 HVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIV  326 (647)
T ss_dssp             EEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEE
T ss_pred             eeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeee
Confidence            9999999999998643                458999999999999999999999999999999999999999999996

>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3

Probab=99.81  E-value=2.2e-21  Score=178.31  Aligned_cols=213  Identities=15%  Similarity=0.127  Sum_probs=117.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccce----eeEeeEEEEcCCceEEEEEEeCCCC---------CceEEEEEe
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI----QNIYDSLDVHVGQSVSVLVTLNQPP---------KDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~----P~~v~~l~l~~GqRydvlv~~~~~~---------~~y~ir~~~   67 (327)
                      |+||+|... ..+.++.-|..+. .+.||.+..    ++......|+||||++..+++++..         |.||.....
T Consensus        71 ~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~  148 (306)
T 1sdd_A           71 KVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYV  148 (306)
T ss_dssp             EEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCS
T ss_pred             EEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccC
Confidence            689999764 4444444444421 268998752    2333456799999999999997643         589999874


Q ss_pred             ccc---CCCceeEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCCCCCcCceEEEEEecc
Q 020366           68 RFT---KNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANS  144 (327)
Q Consensus        68 ~~~---~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  144 (327)
                      ...   ...+.+ ++|.+...... ..+.+  +..+.+        +...+.....    .                 .+
T Consensus       149 ~~~~q~~~GL~G-~liV~~~~~~~-~~~~~--~~~d~e--------~~l~~~d~d~----~-----------------~~  195 (306)
T 1sdd_A          149 NLVEDFNSGLIG-PLLICKKGTLT-EDGTQ--KMFEKQ--------HVLMFAVFDE----S-----------------KS  195 (306)
T ss_dssp             SSHHHHHTTCCE-EEEEECTTCBC-TTSSB--SSSCCC--------CCCBCCEEET----T-----------------SS
T ss_pred             CchhhhccCceE-EEEEccCCCCC-ccCCc--Ccccce--------EEEEEEeccc----c-----------------cc
Confidence            321   122334 34444322100 00111  000000        0000000000    0                 00


Q ss_pred             ccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCC--CcCc
Q 020366          145 APLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEK--TMQS  222 (327)
Q Consensus       145 ~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~--~~HP  222 (327)
                      .. ......|+|||+.+..  .|                                .+.++.|++|+|.|.|.+.  ..||
T Consensus       196 ~~-~~~~~~~~ING~~~~~--~p--------------------------------~l~v~~G~~vrlrliN~g~~~~~h~  240 (306)
T 1sdd_A          196 WN-QTSSLMYTVNGYVNGT--MP--------------------------------DITVCAHDHISWHLIGMSSGPELFS  240 (306)
T ss_dssp             SS-CCCCEEECSSSCCSSC--CC--------------------------------CCCCCCC------BBCCCSSSCEEC
T ss_pred             cc-cCCCcceeeCCEecCC--Cc--------------------------------ceEEcCCCEEEEEEEeCCCCCccEE
Confidence            00 0112357889987631  11                                1356789999999999875  4799


Q ss_pred             eeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366          223 WHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       223 ~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      ||+|||.|.+    .|               .++||+.|.||+.+.|+|.+++||.|+||||+++|++.||+..+.|.+.
T Consensus       241 ~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~  301 (306)
T 1sdd_A          241 IHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC  301 (306)
T ss_dssp             CBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred             EEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence            9999999986    23               3589999999999999999999999999999999999999999998643

>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*

Probab=99.80  E-value=2.8e-19  Score=188.45  Aligned_cols=262  Identities=13%  Similarity=0.149  Sum_probs=159.3

Q ss_pred             CeeEEecCCC-cEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEE
Q 020366            1 MFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAI   79 (327)
Q Consensus         1 RlRliNa~~~-~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ai   79 (327)
                      ||||||+|.. ..+.|+|+||+|+        ++|+.+++|.|++||||||+|++++ +|.|+|++....-. .....++
T Consensus       282 RlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~-~~Gm~~~  351 (1065)
T 2j5w_A          282 KWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PGEWMLSCQNLNHL-KAGLQAF  351 (1065)
T ss_dssp             EEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS-CEEEEEEECSHHHH-HTTCEEE
T ss_pred             EEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC-CeeEEEEecCcchh-hCCCEEE
Confidence            8999999986 7999999999999        4688999999999999999999997 68999998764210 0124577


Q ss_pred             EEecCCCCCCCCCCCCCCCCcccccccccccccccccccCC------CCCCCCCCCCCCcCceEEEEEeccccccCCeEE
Q 020366           80 LHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAA------RPNPQGSFHYGKINTTRTIVLANSAPLINGKLR  153 (327)
Q Consensus        80 l~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  153 (327)
                      ++|.+...+.+.+.|..+. ...+ +..++.+.|++.|...      .+.++++       ....+ +.......++++.
T Consensus       352 ~~V~~~~~~~~~~~~~g~~-~~~~-~i~A~e~~wdy~~~~~~~~~~~~~~~~~s-------~~~~~-l~~~~~~ig~~y~  421 (1065)
T 2j5w_A          352 FQVQECNKSSSKDNIRGKH-VRHY-YIAAEEIIWNYAPSGIDIFTKENLTAPGS-------DSAVF-FEQGTTRIGGSYK  421 (1065)
T ss_dssp             EEEECSCCCCCCCCCTTSE-EEEE-EEEEEEEEEESCTTSBCTTTCCBTTCTTC-------TTHHH-HCCBTTBCCSEEE
T ss_pred             EEEecCCCccccccccccc-eeEE-EEeceecccccCCCCcccccccccCCCcc-------cchhh-hccCCcccCceEe
Confidence            8887654332222222211 1112 3345556666665432      1112211       01111 2221123344444


Q ss_pred             EEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEE
Q 020366          154 YAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV  233 (327)
Q Consensus       154 ~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl  233 (327)
                      -.++ +.|.+              ++|..+.. ..|.........+++.++.|++|+|+|.|.....|+||+||+.|+++
T Consensus       422 k~v~-~~y~d--------------~~f~~~~~-~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~  485 (1065)
T 2j5w_A          422 KLVY-REYTD--------------ASFTNRKE-RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKN  485 (1065)
T ss_dssp             EEEE-EEESS--------------TTCCSBCC-CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGG
T ss_pred             eeee-ecccC--------------CceEEcCc-CCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeecc
Confidence            4444 44432              12221100 00100001112467899999999999999999999999999999999


Q ss_pred             EeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe---cCCe-------eeEEEeeehh--hhccCceEEEEEEc
Q 020366          234 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL---DNQG-------MWNMRSAIWE--RQYLGQQFYLKVWN  301 (327)
Q Consensus       234 ~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a---dnpG-------~W~~HCHi~~--h~~~Gm~~~~~v~~  301 (327)
                      +.|. .+....   .+..+...++...|.||+..+-++..   +.||       .|+||+|+..  .+..|+...+.|-.
T Consensus       486 ~~g~-~~~~~~---~~~~~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~  561 (1065)
T 2j5w_A          486 NEGT-YYSPNY---NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICK  561 (1065)
T ss_dssp             GCSB-CCBCC----------CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEEC
T ss_pred             CCCc-cccccc---ccccCCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEec
Confidence            9863 221110   00011224555667888876666654   4565       6999999966  56778888887765


Q ss_pred             C
Q 020366          302 A  302 (327)
Q Consensus       302 ~  302 (327)
                      .
T Consensus       562 ~  562 (1065)
T 2j5w_A          562 K  562 (1065)
T ss_dssp             T
T ss_pred             c
Confidence            4

>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...

Probab=99.76  E-value=2e-17  Score=154.09  Aligned_cols=89  Identities=15%  Similarity=0.159  Sum_probs=77.1

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC--ceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL--TRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++++|++.|.+...|++|+|||.|+|++.  |.+          .+++  ++||+.|++|+.+.|.|.+++||.
T Consensus       233 l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~----------~~~p~~~~dtv~l~pGer~~v~v~~~~pG~  300 (340)
T 2bw4_A          233 LTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQPGV  300 (340)
T ss_dssp             EEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSCEE
T ss_pred             eEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Ccc----------cCCccccceEEEeCCCceEEEEEECCCCee
Confidence            67889999999988888889999999999999863  421          2233  479999999999999999999999


Q ss_pred             eEEEeeeh-hhhccCceEEEEEEc
Q 020366          279 WNMRSAIW-ERQYLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi~-~h~~~Gm~~~~~v~~  301 (327)
                      |+||||++ +|.+.||++.+.|..
T Consensus       301 y~~~~h~~~~h~~~Gm~~~~~V~~  324 (340)
T 2bw4_A          301 YAYVNHNLIEAFELGAAGHFKVTG  324 (340)
T ss_dssp             EEEEESSHHHHHTTSCEEEEEEES
T ss_pred             eEEEcCchHHHHhCCCEEEEEECC
Confidence            99999999 599999999999873

>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*

Probab=99.74  E-value=1.8e-19  Score=183.53  Aligned_cols=84  Identities=17%  Similarity=0.247  Sum_probs=76.9

Q ss_pred             EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+.  ..||||||||.|+|++.+ |               .++||+.|+|++++.|+|++||||.
T Consensus       370 l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~  433 (770)
T 2r7e_B          370 LVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGI  433 (770)
T ss_dssp             CCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBC
T ss_pred             eEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCc
Confidence            567899999999999874  389999999999998764 2               3899999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |+||||+++|++.||++.|.|.
T Consensus       434 w~~hcH~~~H~~~GM~~~~~V~  455 (770)
T 2r7e_B          434 WRVECLIGEHLHAGMSTLFLVY  455 (770)
T ss_dssp             CCBCCCSHHHHTTBCCCCCCBC
T ss_pred             eEEEeccccccccccccccccc
Confidence            9999999999999999999884

>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A

Probab=99.73  E-value=3.5e-17  Score=151.54  Aligned_cols=90  Identities=18%  Similarity=0.123  Sum_probs=79.7

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|++++|.|.|.+ ...|+||||||.|+|++.+.+.           .+|.++|++.|.+|+.+.|.|++++||.|
T Consensus       216 l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y  284 (327)
T 1kbv_A          216 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNY  284 (327)
T ss_dssp             EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred             EEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEE
Confidence            67899999999999986 4689999999999999997441           22778999999999999999999999999


Q ss_pred             EEEeeehhhh-ccCceEEEEEEc
Q 020366          280 NMRSAIWERQ-YLGQQFYLKVWN  301 (327)
Q Consensus       280 ~~HCHi~~h~-~~Gm~~~~~v~~  301 (327)
                      +||||+..|. ..||.+.+.+..
T Consensus       285 ~l~~h~~~~~~~~g~~a~l~~~g  307 (327)
T 1kbv_A          285 TLVDHSIFRAFNKGALGQLKVEG  307 (327)
T ss_dssp             EEEESSTHHHHHSSCEEEEEEES
T ss_pred             EEEeccccccccCCcEEEEEECC
Confidence            9999999995 788999998863

>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*

Probab=99.69  E-value=3e-18  Score=174.10  Aligned_cols=82  Identities=18%  Similarity=0.158  Sum_probs=75.3

Q ss_pred             EEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+..  .||||||||.|+|++                   .++||+.|.|++.+.|+|+++|||.
T Consensus       246 l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg-------------------~~~Dtv~v~Pg~~~~v~~~~~~pG~  306 (742)
T 2r7e_A          246 LIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN-------------------HRQASLEISPITFLTAQTLLMDLGQ  306 (742)
T ss_dssp             CEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT-------------------EECCSCCCCTTCCCEEEECCCSCSE
T ss_pred             eEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe-------------------EecceEEeCCCcEEEEEEEeCCCee
Confidence            4688999999999998865  699999999999963                   1489999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEEc
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      |+||||+++|++.||+..+.|..
T Consensus       307 w~~hCH~~~H~~~GM~~~~~V~~  329 (742)
T 2r7e_A          307 FLLFCHISSHQHDGMEAYVKVDS  329 (742)
T ss_dssp             ECCCCCSSSSSTTSCCBCEEECC
T ss_pred             EEEEeCChhHHhCCCeEEEEEec
Confidence            99999999999999999999973

>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*

Probab=99.67  E-value=2.5e-18  Score=174.68  Aligned_cols=83  Identities=23%  Similarity=0.313  Sum_probs=75.4

Q ss_pred             EEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+  ...||||||||.|+|+                   +.++||+.|.|++.+.|.|.+||||.
T Consensus       628 l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~-------------------~~~~Dtv~l~Pg~~~~v~~~ad~pG~  688 (742)
T 2r7e_A          628 LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK-------------------MVYEDTLTLFPFSGETVFMSMENPGL  688 (742)
T ss_dssp             CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB-------------------SSSBCSSCCCCCSSEECCEECCCCCC
T ss_pred             EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe-------------------ccceeEEEECCCcEEEEEEEcCCCeE
Confidence            57899999999999964  3579999999999986                   24799999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEEcC
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      |+||||+++|++.|||..|+|.+-
T Consensus       689 w~~hcH~~~H~~~GM~~~~~V~~~  712 (742)
T 2r7e_A          689 WILGCHNSDFRNRGMTALLKVSSC  712 (742)
T ss_dssp             SCCEECCCSTTHHHHSCCCCCCCC
T ss_pred             EEEEeCCchHHhCCCeEEEEEEeC
Confidence            999999999999999999998743

>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A

Probab=99.57  E-value=1.3e-14  Score=134.56  Aligned_cols=90  Identities=10%  Similarity=0.048  Sum_probs=74.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC-ceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL-TRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|++++|++.|.....+++++|||.|.|++ . |.+.         ..|. ++||+.|.+|+.+.+.|.+++||.|
T Consensus       227 l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y  295 (333)
T 1mzy_A          227 LKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVY  295 (333)
T ss_dssp             EEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEE
T ss_pred             eEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEE
Confidence            6788999999988877666666668889999987 3 5321         1122 5899999999999999999999999


Q ss_pred             EEEeeehhhh-ccCceEEEEEEc
Q 020366          280 NMRSAIWERQ-YLGQQFYLKVWN  301 (327)
Q Consensus       280 ~~HCHi~~h~-~~Gm~~~~~v~~  301 (327)
                      +||||+++|+ +.|||..|+|..
T Consensus       296 ~~~ch~~~h~~~~Gm~~~~~v~~  318 (333)
T 1mzy_A          296 AYVNHNLIEAVHKGATAHVLVEG  318 (333)
T ss_dssp             EEEESSHHHHHTTCCEEEEEEES
T ss_pred             EEecChhhhHhhCCCEEEEEEcC
Confidence            9999999997 999999999974

>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A

Probab=99.53  E-value=6.6e-15  Score=136.24  Aligned_cols=85  Identities=24%  Similarity=0.259  Sum_probs=74.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||||+|+.+.+.|+|+||.|+||+.||.+++|+.++++.|++||||||++++++ +|.|||++............|+|
T Consensus       225 RlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~~~g~~a~l  303 (327)
T 1kbv_A          225 RMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQL  303 (327)
T ss_dssp             EEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEE
T ss_pred             EEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccccCCcEEEE
Confidence            89999999999999999999999999999999999999999999999999999997 68999999765431122468999


Q ss_pred             EecCCC
Q 020366           81 HYTNSH   86 (327)
Q Consensus        81 ~y~~~~   86 (327)
                      +|.+..
T Consensus       304 ~~~g~~  309 (327)
T 1kbv_A          304 KVEGAE  309 (327)
T ss_dssp             EEESCC
T ss_pred             EECCCC
Confidence            998754

>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...

Probab=99.38  E-value=2.9e-12  Score=118.93  Aligned_cols=89  Identities=16%  Similarity=0.201  Sum_probs=74.2

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCC--ceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTL--TRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++++|+..+.....+++++|||.|+|++  .|.+          .+|+  +.||+.|++|+.+.+.|.+++||.
T Consensus       227 l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvlv~~~~pG~  294 (336)
T 1oe1_A          227 LTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAALYTFKQPGV  294 (336)
T ss_dssp             EEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEEEECCSCEE
T ss_pred             eEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEEEEcCCCce
Confidence            6788999999876666666677778999999996  3422          2233  479999999999999999999999


Q ss_pred             eEEEeeehhhh-ccCceEEEEEEc
Q 020366          279 WNMRSAIWERQ-YLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi~~h~-~~Gm~~~~~v~~  301 (327)
                      |+||||.+.|. ..||++.+.|..
T Consensus       295 y~~~~h~~~~~~~~G~~~~~~V~~  318 (336)
T 1oe1_A          295 YAYLNHNLIEAFELGAAGHIKVEG  318 (336)
T ss_dssp             EEEEESSHHHHHTTSCEEEEEEES
T ss_pred             EEEEechhhccccCCCeEEEEECC
Confidence            99999999885 899999999973

>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}

Probab=99.38  E-value=1.2e-12  Score=125.84  Aligned_cols=92  Identities=16%  Similarity=0.129  Sum_probs=80.5

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|++|+|.|.|.+ ...|+||+|||.|.|++.+.+           ...|.+.|++.|.+|+...|.|.+++||.|
T Consensus       206 l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~-----------~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y  274 (442)
T 2zoo_A          206 LTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG-----------SLKNHNVQTTLIPAGGAAIVEFKVEVPGTF  274 (442)
T ss_dssp             EEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS-----------SCEECSBSEEEECTTEEEEEEEECCSCEEE
T ss_pred             eEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc-----------cCCCccceEEEECCCeeEEEEEEcCCCCeE
Confidence            67889999999999975 468999999999999999733           122778999999999999999999999999


Q ss_pred             EEEeeehhh-hccCceEEEEEEcCc
Q 020366          280 NMRSAIWER-QYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h-~~~Gm~~~~~v~~~~  303 (327)
                      ++|||...| ...||++.+.|....
T Consensus       275 ~~~~~~~~~~~~~g~~a~l~v~~~~  299 (442)
T 2zoo_A          275 ILVDHSIFRAFNKGALAMLKVEGPD  299 (442)
T ss_dssp             EEEESSTHHHHTTSCEEEEEEESCC
T ss_pred             EEEecccccccccCceEEEEecCCC
Confidence            999999999 588999999987443

>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}

Probab=99.37  E-value=2.3e-11  Score=117.13  Aligned_cols=80  Identities=21%  Similarity=0.219  Sum_probs=65.4

Q ss_pred             EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      ++++.|++++|.+.|...  ..|++|+||..    ..+ |                ..|++.|.+|+...++|.+++||.
T Consensus       197 i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~----~~D-G----------------~~~~~~i~pG~~~~~~~~~~~~G~  255 (447)
T 2dv6_A          197 LRVRVGDTVELHLKNHKDSLMVHSVDFHGAT----GPG-G----------------AAAFTQTDPGEETVVTFKALIPGI  255 (447)
T ss_dssp             EEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGG-G----------------GGGGCCBCTTCEEEEEEECCSCEE
T ss_pred             EEecCCCEEEEEEEeCCCCceeEEEeecccc----CCC-C----------------CCccEEeCCCCEEEEEEECCCCeE
Confidence            678999999999999853  68999999953    111 2                025567999999999999999999


Q ss_pred             eEEEeee---hhhhccCceEEEEEEc
Q 020366          279 WNMRSAI---WERQYLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi---~~h~~~Gm~~~~~v~~  301 (327)
                      |.||||.   ..|...||...+.|..
T Consensus       256 ~~yh~h~~~~~~~~~~Gl~g~l~v~~  281 (447)
T 2dv6_A          256 YVYHCATPSVPTHITNGMYGLLLVEP  281 (447)
T ss_dssp             EEEECCSSSHHHHHHTTCEEEEEEEC
T ss_pred             EEEEeCCCChHHHHhCCCEEEEEEeC
Confidence            9999996   3678899999988854

>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}

Probab=99.33  E-value=2.4e-12  Score=104.26  Aligned_cols=92  Identities=12%  Similarity=0.086  Sum_probs=71.4

Q ss_pred             EEecCCcEEEEEEEeCCCC-cCceeecCCCeEEEE------eccC---CCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366          201 MQVNLHEYIEVVFQNNEKT-MQSWHLDGYDFWVVG------YGSG---QWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL  270 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~-~HP~HLHG~~F~Vl~------~g~G---~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir  270 (327)
                      ++++.|++|+|+|.|.+.+ .|.||+|+..+.+..      ...|   .|.+.      -....++||..|.+++...+.
T Consensus        37 i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v~  110 (139)
T 2aan_A           37 LTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEVT  110 (139)
T ss_dssp             EEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEEE
T ss_pred             EEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEEE
Confidence            6789999999999999888 899999987532110      0001   11100      012357899999999999999


Q ss_pred             EEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          271 VSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       271 f~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |.+++||.|+||||+..|+. ||...++|
T Consensus       111 f~~~~pG~y~f~C~~~~H~~-GM~G~i~V  138 (139)
T 2aan_A          111 FTAPAAGTYLYICTVPGHYP-LMQGKLVV  138 (139)
T ss_dssp             EECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred             EECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence            99999999999999988988 99999887

>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}

Probab=99.31  E-value=1.3e-12  Score=125.59  Aligned_cols=85  Identities=20%  Similarity=0.237  Sum_probs=73.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||||+|+|....+.|+|+||+|+||++||.+++|..++++.|++||||||+|++++ +|.|+++.............++|
T Consensus       215 rlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~~~~g~~a~l  293 (442)
T 2zoo_A          215 RLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRAFNKGALAML  293 (442)
T ss_dssp             EEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHHHTTSCEEEE
T ss_pred             EEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccccccCceEEE
Confidence            89999999989999999999999999999999999999999999999999999996 68999998754321123467999


Q ss_pred             EecCCC
Q 020366           81 HYTNSH   86 (327)
Q Consensus        81 ~y~~~~   86 (327)
                      +|.+..
T Consensus       294 ~v~~~~  299 (442)
T 2zoo_A          294 KVEGPD  299 (442)
T ss_dssp             EEESCC
T ss_pred             EecCCC
Confidence            998764

>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A

Probab=99.26  E-value=2e-11  Score=93.60  Aligned_cols=85  Identities=16%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCe
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQG  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG  277 (327)
                      ..+.++.|++|+|  .|.+...|++|+||..|...   .|..    .      +....++..+++|+...++|.+ +.||
T Consensus        19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----~------~~~~~~~~~i~pG~~~~~~f~~~~~~G   83 (105)
T 3cvb_A           19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----A------DKLSHSQLMFSPGESYEITFSSDFPAG   83 (105)
T ss_dssp             SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----H------HHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred             CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----c------ccccccccccCCCCeEEEEEecCCCCe
Confidence            3478999999976  48888899999999876431   0100    0      0122588899999999999998 7999


Q ss_pred             eeEEEeeehhhhccCceEEEEEE
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .|.||||.  |..+||...+.|.
T Consensus        84 ~y~y~C~~--H~~~GM~G~i~V~  104 (105)
T 3cvb_A           84 TYTYYCAP--HRGAGMVGKITVE  104 (105)
T ss_dssp             EEEEECTT--TGGGTCEEEEEEC
T ss_pred             eEEEEeCC--chhcCCEEEEEEc
Confidence            99999995  9999999999874

>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}

Probab=99.24  E-value=3.4e-11  Score=111.79  Aligned_cols=84  Identities=14%  Similarity=0.210  Sum_probs=69.3

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccce-eeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc---C--CCc
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-QNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT---K--NVL   74 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~-P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~---~--~~~   74 (327)
                      ||||+|++.. .+.|+|+||+|+||+.||.+++ |..++++.|++||||||++++++ +|.|++......-   .  ...
T Consensus       190 rlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~  267 (339)
T 2zwn_A          190 KIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPG  267 (339)
T ss_dssp             EEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSC
T ss_pred             EEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCC
Confidence            7999999954 8999999999999999999986 89999999999999999999987 5777777764431   1  122


Q ss_pred             eeEEEEEecCCC
Q 020366           75 TATAILHYTNSH   86 (327)
Q Consensus        75 ~~~ail~y~~~~   86 (327)
                      ...++|+|.+..
T Consensus       268 gm~a~l~~~g~~  279 (339)
T 2zwn_A          268 GPITVIEYDGVP  279 (339)
T ss_dssp             SSEEEEEETTSC
T ss_pred             CcEEEEEECCCC
Confidence            346899998653

>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}

Probab=99.23  E-value=3.7e-11  Score=109.04  Aligned_cols=85  Identities=11%  Similarity=-0.028  Sum_probs=69.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|+.|+|.+.|.....|++|+||...   ....|.             |. .+...|+||+....+|.++++|.|.
T Consensus        68 i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~-------------p~-~~~~~i~PG~~~~y~f~~~~~Gt~~  130 (288)
T 3gdc_A           68 LWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGT-------------PG-IGAGSIAPGQSFTYEFDATPFGTHL  130 (288)
T ss_dssp             EEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCC-------------TT-STTCSBCTTCEEEEEEECCSCEEEE
T ss_pred             EEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCC-------------CC-ccceeECCCCEEEEEEEcCCCccEE
Confidence            788999999999999999999999999862   111221             11 2445789999999999999999999


Q ss_pred             EEeeeh---hhhccCceEEEEEEcC
Q 020366          281 MRSAIW---ERQYLGQQFYLKVWNA  302 (327)
Q Consensus       281 ~HCHi~---~h~~~Gm~~~~~v~~~  302 (327)
                      ||||..   .|...||...+.|..+
T Consensus       131 yH~H~~~~~~~~~~Gl~G~liV~~~  155 (288)
T 3gdc_A          131 YHCHQSPLAPHIAKGLYGGFIVEPK  155 (288)
T ss_dssp             EECCCSSHHHHHHTTCEEEEEEECS
T ss_pred             EEecCcchHHHHhCcCeEEEEEeCC
Confidence            999996   6889999999988644

>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}

Probab=99.14  E-value=2.1e-10  Score=105.42  Aligned_cols=84  Identities=13%  Similarity=0.167  Sum_probs=69.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-----CCc
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-----NVL   74 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-----~~~   74 (327)
                      ||||||++.. .+.|+|+||.|+||+.||.++ +|..++++.|+||||+||++++++ +|.|.+......-.     ...
T Consensus       189 rlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~  266 (318)
T 3g5w_A          189 RLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDG  266 (318)
T ss_dssp             EEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSC
T ss_pred             EEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCC
Confidence            7999999975 689999999999999999997 799999999999999999999986 68887777653211     112


Q ss_pred             eeEEEEEecCCC
Q 020366           75 TATAILHYTNSH   86 (327)
Q Consensus        75 ~~~ail~y~~~~   86 (327)
                      .-.++|+|.+..
T Consensus       267 Gm~~~i~~~g~~  278 (318)
T 3g5w_A          267 GIMTTIEYEEVG  278 (318)
T ss_dssp             BSEEEEEETTTC
T ss_pred             CCEEEEEECCCC
Confidence            346889998753

>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...

Probab=99.02  E-value=1.9e-10  Score=106.64  Aligned_cols=84  Identities=15%  Similarity=0.115  Sum_probs=67.4

Q ss_pred             CeeEEecCCCcEEEEE-EeCCeEEEEEecCccceee--EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366            1 MFRISNVGLSTSFNFR-IQGHTMKLVEVEGSHTIQN--IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~s-idgh~l~VIa~DG~~v~P~--~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~   77 (327)
                      |+||+|+++.+.+.|. |+||.++||+ ||.+++|.  .++.+.|++||||||+|++++ +|.|++..............
T Consensus       234 rvRlin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~~  311 (336)
T 1oe1_A          234 TVLLIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGAA  311 (336)
T ss_dssp             EEEEEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCE
T ss_pred             EEEEEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCCe
Confidence            6899999988777654 5999999998 99999864  368999999999999999997 68999998764211112356


Q ss_pred             EEEEecCCC
Q 020366           78 AILHYTNSH   86 (327)
Q Consensus        78 ail~y~~~~   86 (327)
                      |+++|.+..
T Consensus       312 ~~~~V~~~~  320 (336)
T 1oe1_A          312 GHIKVEGKW  320 (336)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEECCCC
Confidence            899998654

>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A

Probab=98.97  E-value=1.7e-09  Score=82.90  Aligned_cols=84  Identities=13%  Similarity=0.076  Sum_probs=63.2

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~  278 (327)
                      .+.++.|++|+|+  |.+...|.+|+|+..+..  . .|.    ...      ....|++.+.+|+...+.|.+ +.||.
T Consensus        21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~~------~~~~~~~~~~pG~~~~~~f~~~~~~G~   85 (106)
T 2gim_A           21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LAK------SLSHKQLLMSPGQSTSTTFPADAPAGE   85 (106)
T ss_dssp             EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HHH------HHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred             EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cch------hccccceeeCCCCEEEEEEecCCCCce
Confidence            4788999999886  777788999999865421  0 010    000      011467788899999999988 89999


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |.||||  .|..+||...+.|.
T Consensus        86 y~y~C~--~H~~~GM~G~i~V~  105 (106)
T 2gim_A           86 YTFYCE--PHRGAGMVGKITVA  105 (106)
T ss_dssp             EEEECT--TTGGGTCEEEEEEC
T ss_pred             EEEEeC--ChhhcCcEEEEEEc
Confidence            999999  49999999999874

>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A

Probab=98.92  E-value=4.5e-09  Score=84.88  Aligned_cols=95  Identities=12%  Similarity=0.043  Sum_probs=69.9

Q ss_pred             EEecCCcEEEEEEEe--CCCCcCceeecCCC--eEEEE-ec--cC---CCCccccccCCCCCCCceeeEEeCCCCEEEEE
Q 020366          201 MQVNLHEYIEVVFQN--NEKTMQSWHLDGYD--FWVVG-YG--SG---QWAAEKRRTYNLADTLTRHTAQVYPQSWTVIL  270 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N--~~~~~HP~HLHG~~--F~Vl~-~g--~G---~~~~~~~~~~n~~~p~~rDTv~vp~~g~~vir  270 (327)
                      ++++.|++|+|++.|  .+.+.|.||++...  |.-+. .+  .|   .|-+.     .-....+.+|..|.+|....+.
T Consensus        35 i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG~~~~~~  109 (140)
T 1qhq_A           35 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAGESGSVT  109 (140)
T ss_dssp             EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTTEEEEEE
T ss_pred             EEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCCceeEEE
Confidence            688999999999999  67789999998532  21100 00  00   01000     0011346899999999999999


Q ss_pred             EEecCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          271 VSLDNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       271 f~adnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |.++.||.|.|||++..|...||...++|.
T Consensus       110 ~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~  139 (140)
T 1qhq_A          110 FRTPAPGTYLYICTFPGHYLAGMKGTLTVT  139 (140)
T ss_dssp             EECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred             EEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence            999999999999999889999999998874

>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...

Probab=98.88  E-value=1.3e-09  Score=101.09  Aligned_cols=84  Identities=15%  Similarity=0.107  Sum_probs=65.0

Q ss_pred             CeeEEecCCCcEEEEE-EeCCeEEEEEecCccce-ee-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366            1 MFRISNVGLSTSFNFR-IQGHTMKLVEVEGSHTI-QN-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~s-idgh~l~VIa~DG~~v~-P~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~   77 (327)
                      |+||+|++..+.+.|. +++|.++||+ ||.+++ |. .++++.|++||||||+|++++ +|.|+++.............
T Consensus       240 r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~Gm~  317 (340)
T 2bw4_A          240 RVLVVHSQANRDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAA  317 (340)
T ss_dssp             EEEEEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCE
T ss_pred             EEEEEECCCCCccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCCCE
Confidence            6789998877665555 7899999997 999986 44 589999999999999999997 69999998764211111245


Q ss_pred             EEEEecCCC
Q 020366           78 AILHYTNSH   86 (327)
Q Consensus        78 ail~y~~~~   86 (327)
                      ++++|.+..
T Consensus       318 ~~~~V~~~~  326 (340)
T 2bw4_A          318 GHFKVTGEW  326 (340)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEECCCC
Confidence            889998654

>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A

Probab=98.88  E-value=1.4e-09  Score=100.57  Aligned_cols=84  Identities=17%  Similarity=0.058  Sum_probs=63.9

Q ss_pred             CeeEEecCCCcEEEE-EEeCCeEEEEEecCcccee-e-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeE
Q 020366            1 MFRISNVGLSTSFNF-RIQGHTMKLVEVEGSHTIQ-N-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~-sidgh~l~VIa~DG~~v~P-~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~   77 (327)
                      |+||+|+++.+.+.| .|++|.++||+ ||.+++| . .++++.|++|||+||+|++++ +|+|++..............
T Consensus       234 r~Rl~n~~~~~~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~~~Gm~  311 (333)
T 1mzy_A          234 NVLFVHSQPNRDSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHKGAT  311 (333)
T ss_dssp             EEEEEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTCCE
T ss_pred             EEEEEECCCCCccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHhhCCCE
Confidence            578888876554332 38999999999 9999974 4 489999999999999999997 59999988754211012356


Q ss_pred             EEEEecCCC
Q 020366           78 AILHYTNSH   86 (327)
Q Consensus        78 ail~y~~~~   86 (327)
                      ++++|.+..
T Consensus       312 ~~~~v~~~~  320 (333)
T 1mzy_A          312 AHVLVEGEW  320 (333)
T ss_dssp             EEEEEESCC
T ss_pred             EEEEEcCCC
Confidence            899998653

>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A

Probab=98.79  E-value=8.7e-09  Score=77.78  Aligned_cols=78  Identities=12%  Similarity=0.038  Sum_probs=60.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|.|+  |.+...|.+|+|+..+-    +.      ...      ....|+..+.+|+...+.|  +.||.|
T Consensus        20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p----g~------~~~------~~~~~~~~~~pG~~~~~tf--~~~G~y   79 (98)
T 1pcs_A           20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP----AD------TAA------KLSHKGLLFAAGESFTSTF--TEPGTY   79 (98)
T ss_dssp             EEEECTTCEEEEE--ECSSCCEEEEECCSSSC----HH------HHH------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred             EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC----cc------ccc------cccccccccCCCCEEEEEc--CCCeEE
Confidence            4789999999886  77778899999875421    10      000      0125788999999888877  899999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||+.  |..+||...+.|
T Consensus        80 ~~~C~~--H~~~gM~G~i~V   97 (98)
T 1pcs_A           80 TYYCEP--HRGAGMVGKVVV   97 (98)
T ss_dssp             EEECGG--GTTTTCEEEEEE
T ss_pred             EEEcCC--ccccCCeEEEEE
Confidence            999995  999999999887

>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A

Probab=98.78  E-value=3.1e-08  Score=73.52  Aligned_cols=71  Identities=13%  Similarity=0.134  Sum_probs=57.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|.|+  |.+...|.+|+|+.         +              +...++..+.+|+...+.|  +.||.|
T Consensus        20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~y   72 (91)
T 1bxv_A           20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGTY   72 (91)
T ss_dssp             EEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred             EEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence            4789999999875  77778899999872         1              1125777888998888777  899999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||+.  |..+||...+.|
T Consensus        73 ~~~C~~--H~~~gM~g~i~V   90 (91)
T 1bxv_A           73 TYYCEP--HRGAGMVGKIVV   90 (91)
T ss_dssp             EEECTT--TGGGTCEEEEEE
T ss_pred             EEEeCC--CccCCCEEEEEE
Confidence            999995  998899998876

>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1

Probab=98.78  E-value=2e-08  Score=75.68  Aligned_cols=79  Identities=18%  Similarity=0.119  Sum_probs=60.5

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|+|  .|.+...|.+|+|+..+-     .| ++.         ...++|+..+.+|+...++|  +.||.|
T Consensus        19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~-~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y   79 (98)
T 2plt_A           19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG-VNA---------DAISRDDYLNAPGETYSVKL--TAAGEY   79 (98)
T ss_dssp             EEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT-CCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred             EEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc-ccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence            478999999987  688778999999875320     01 100         01347889999999888877  599999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .||||.  |..+||...+.|
T Consensus        80 ~y~C~~--H~~~gM~G~i~V   97 (98)
T 2plt_A           80 GYYCEP--HQGAGMVGKIIV   97 (98)
T ss_dssp             EEECGG--GGGGTCEEEEEE
T ss_pred             EEEcCC--ccccCCeEEEEE
Confidence            999995  999999999877

>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*

Probab=98.67  E-value=1.4e-08  Score=76.38  Aligned_cols=77  Identities=14%  Similarity=0.202  Sum_probs=58.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|+|+  |.+...|.+++++..+     ..|.      .      ....++..+.+|+...+.|  +.||.|
T Consensus        20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~-----~~~~------~------~~~~~~~~~~~g~~~~~tf--~~~G~y   78 (97)
T 1b3i_A           20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPA-----GESA------P------ALSNTKLAIAPGSFYSVTL--GTPGTY   78 (97)
T ss_dssp             EEEECTTCEEEEE--ECSSCCCCBEEEECCT-----TSCH------H------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred             EEEECCCCEEEEE--ECCCCCeEEEEeCCCC-----cccc------c------cccccceecCCCCEEEEEe--CCCeEE
Confidence            3688999998876  7777889999887654     1110      0      0114667788888888877  899999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||+.  |..+||...++|
T Consensus        79 ~y~C~~--H~~~gM~G~i~V   96 (97)
T 1b3i_A           79 SFYCTP--HRGAGMVGTITV   96 (97)
T ss_dssp             EEECSS--TTTTTCEEEEEE
T ss_pred             EEEccC--hhhcCCEEEEEE
Confidence            999995  999999998876

>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A

Probab=98.66  E-value=1.1e-07  Score=73.50  Aligned_cols=73  Identities=15%  Similarity=0.250  Sum_probs=55.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|+.|+|.+.|.+...|-|++.+.         |                  -+..+.||+...+.|.++.||.|
T Consensus        39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~------------------~~~~i~pG~~~~~~f~~~~~G~y   91 (112)
T 1iby_A           39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------G------------------VQEVIKAGETKTISFTADKAGAF   91 (112)
T ss_dssp             EEEEETTCEEEEEEEECSSSCEEEEEGGG---------T------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred             EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------C------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence            36889999999999999866454443321         1                  15678999999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .||||+..|.. +|...++|.
T Consensus        92 ~~~C~~~~~~~-~M~g~i~V~  111 (112)
T 1iby_A           92 TIWCQLHPKNI-HLPGTLNVV  111 (112)
T ss_dssp             EEBCSSSCTTT-BCCEEEEEE
T ss_pred             EEECCCCCchH-HCEEEEEEe
Confidence            99999933322 277777764

>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A

Probab=98.57  E-value=6.5e-08  Score=73.03  Aligned_cols=81  Identities=14%  Similarity=0.086  Sum_probs=59.4

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|+|  .|.+...|.+|+++..|-     .| ++..   ..    ...+|++.+.+|+...+.|  +.||.|
T Consensus        18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~---~~----~~~~~~~~~~~G~~~~~~f--~~~G~y   80 (99)
T 1byp_A           18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVT---KI----SMPEEDLLNAPGEEYSVTL--TEKGTY   80 (99)
T ss_dssp             EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHH---HH----SCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred             EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-cccc---cc----cccccceeeCCCCEEEEEe--CCCcEE
Confidence            478999999877  688878999999986541     11 0000   00    1125667788898888877  599999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|||+.  |..+||...+.|
T Consensus        81 ~~~C~~--H~~~gM~G~i~V   98 (99)
T 1byp_A           81 KFYCAP--HAGAGMVGKVTV   98 (99)
T ss_dssp             EEECGG--GTTTTCEEEEEE
T ss_pred             EEEcCC--ccccCCEEEEEE
Confidence            999995  999999998876

>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A

Probab=98.51  E-value=4.4e-07  Score=68.66  Aligned_cols=70  Identities=13%  Similarity=0.194  Sum_probs=57.4

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|+.|+|++.|.+...|-|.+.+..+                           ...+.+|....+.|.++.||.|.
T Consensus        30 i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y~   82 (100)
T 4hci_A           30 ITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTYE   82 (100)
T ss_dssp             EEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEEE
T ss_pred             EEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceEE
Confidence            789999999999999988877776544322                           12456778888999999999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |+|..  |..+||...++|
T Consensus        83 y~C~~--H~~~gM~G~i~V   99 (100)
T 4hci_A           83 LICRY--HLLKGMEGKVIV   99 (100)
T ss_dssp             EECTT--TGGGTCEEEEEE
T ss_pred             EECcc--ccCCCCEEEEEE
Confidence            99987  998999888876

>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*

Probab=98.47  E-value=2.4e-07  Score=83.24  Aligned_cols=87  Identities=17%  Similarity=0.234  Sum_probs=68.1

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC----
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN----  275 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn----  275 (327)
                      +++++.|+.|++.+.|.....+.+|+||..+.-  ...|.             |  ...-.|+||+..+-+|.++.    
T Consensus        37 ~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~-------------~--~t~~~i~pG~~~~Y~f~~~~~~~~   99 (276)
T 3kw8_A           37 LIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGT-------------A--MNKSDVEPGGTRTYTWRTHKPGRR   99 (276)
T ss_dssp             CEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCC-------------T--TTTCSBCTTCEEEEEEECCCCEEC
T ss_pred             eEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCC-------------c--CCcCCCCCCCEEEEEEEcCCcccc
Confidence            478999999999999998889999999998632  11221             1  11235789999999999975    


Q ss_pred             ---------CeeeEEEeeeh------hhhccCceEEEEEEcCc
Q 020366          276 ---------QGMWNMRSAIW------ERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       276 ---------pG~W~~HCHi~------~h~~~Gm~~~~~v~~~~  303 (327)
                               +|.|+||||..      .+...||...+.|..+.
T Consensus       100 ~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~  142 (276)
T 3kw8_A          100 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG  142 (276)
T ss_dssp             TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred             ccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence                     58999999983      57889999999886543

>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A

Probab=98.43  E-value=4.6e-07  Score=68.64  Aligned_cols=84  Identities=14%  Similarity=-0.003  Sum_probs=58.1

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCc-eeeEEeCCCCEEEEEEEecCCe
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLT-RHTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~-rDTv~vp~~g~~virf~adnpG  277 (327)
                      ..++++.|++|+|+  |.+...|.++++.-...     .+.+....     . .+.+ .+++.+.+|+...+.|  +.||
T Consensus        17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~-~~~~~~~~~~~~pG~~~~~tf--~~~G   81 (102)
T 1kdj_A           17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----K-AASMDENDLLSEDEPSFKAKV--STPG   81 (102)
T ss_dssp             SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----H-HTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred             CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----h-cccccccceecCCCCEEEEEe--CCCe
Confidence            34789999999875  77778899998731100     00000000     0 0222 3667788888888877  8999


Q ss_pred             eeEEEeeehhhhccCceEEEEE
Q 020366          278 MWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|.|||+.  |..+||...++|
T Consensus        82 ~y~y~C~~--H~~~gM~G~i~V  101 (102)
T 1kdj_A           82 TYTFYCTP--HKSANMKGTLTV  101 (102)
T ss_dssp             EEEEECST--TGGGTCEEEEEE
T ss_pred             EEEEEeCC--CcccCCeEEEEE
Confidence            99999995  999999999887

>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2

Probab=98.40  E-value=2e-07  Score=93.57  Aligned_cols=61  Identities=11%  Similarity=0.120  Sum_probs=53.6

Q ss_pred             CeeEEecCCCc-EEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGLST-SFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~~-~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      ||||||++... .+.|+|+||.|+||+.||.     .++.+.|+||||+||++++++ +|.|.+....
T Consensus       250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~-pG~w~~hch~  311 (647)
T 1sdd_B          250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK-PGWWLLDTEV  311 (647)
T ss_dssp             EEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS-SEEEEEECCC
T ss_pred             EEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc-ceEeecccCc
Confidence            79999999864 8999999999999999864     689999999999999999987 5877766654

>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}

Probab=98.31  E-value=1e-06  Score=81.57  Aligned_cols=86  Identities=17%  Similarity=0.246  Sum_probs=66.8

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC---
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ---  276 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp---  276 (327)
                      ++.++.|+.|+|.+.|.....+.+|.||..+.. .. .|.             |  -+...|+||+....+|.++.|   
T Consensus        78 ~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~-~~-DG~-------------~--~t~~~I~PG~~~~y~f~~~~pg~~  140 (343)
T 3cg8_A           78 LIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI-SS-DGT-------------A--MNKSDVEPGGTRTYTWRTHKPGRR  140 (343)
T ss_dssp             CEEEETTCEEEEEEEECSSSCBCCEESSSBCCG-GG-SCC-------------T--TTTCSBCTTCEEEEEEECCCCEEC
T ss_pred             EEEEECCCEEEEEEEECCCCCeeEEecCcccCC-cC-CCc-------------c--cccccccCCCEEEEEEEeCCCCcc
Confidence            488999999999999998888889999998761 22 231             1  123357899999999998765   


Q ss_pred             ----------eeeEEEeee------hhhhccCceEEEEEEcC
Q 020366          277 ----------GMWNMRSAI------WERQYLGQQFYLKVWNA  302 (327)
Q Consensus       277 ----------G~W~~HCHi------~~h~~~Gm~~~~~v~~~  302 (327)
                                |.|+||||.      ..+...||...+.|..+
T Consensus       141 ~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~  182 (343)
T 3cg8_A          141 DDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK  182 (343)
T ss_dssp             TTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred             cccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecC
Confidence                      789999996      35678899888877543

>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*

Probab=98.31  E-value=2.4e-06  Score=84.17  Aligned_cols=88  Identities=15%  Similarity=0.066  Sum_probs=67.7

Q ss_pred             EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      ++++.|++|++.+.|.-. ..+.+|.||....    +.+..+..         |.. ---.|+||+..+-+|.++.+|.|
T Consensus        36 I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~----~~~~~DGv---------~~v-tq~~I~PG~s~tY~f~~~~~GT~  101 (552)
T 1aoz_A           36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR----GTPWADGT---------ASI-SQCAINPGETFFYNFTVDNPGTF  101 (552)
T ss_dssp             EEEETTCEEEEEEEECCSSCCBCEEEETCCCT----TCGGGSCC---------BTT-TBCCBCTTCEEEEEEECCSCEEE
T ss_pred             EEEeCCCEEEEEEEeCCCCCCeeEEeCCCccC----CCcccCCC---------ccc-ccCCcCCCCeEEEEEECCCCEEE
Confidence            788999999999999886 8899999997631    11000100         000 01247899999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .||||...+...||...+.|..+
T Consensus       102 wYHsH~~~q~~~Gl~G~liV~~~  124 (552)
T 1aoz_A          102 FYHGHLGMQRSAGLYGSLIVDPP  124 (552)
T ss_dssp             EEEECSTTTGGGTCEEEEEEECC
T ss_pred             EEEECchhHHhccCeeeEEEeCC
Confidence            99999988889999999988755

>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*

Probab=98.27  E-value=1.4e-06  Score=79.72  Aligned_cols=88  Identities=16%  Similarity=0.207  Sum_probs=65.0

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC--
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ--  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp--  276 (327)
                      ++++++.|++|+|.+.|.....+.+|.||.++--  ...|.             |.  ..-.|+||+..+-+|++..|  
T Consensus        42 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~--~~dG~-------------~~--~~~~i~PG~~~~Y~~~~~~P~~  104 (313)
T 3tas_A           42 PLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEI--SSDGT-------------KQ--SRSDVEPGGTRTYTWRTHVPGR  104 (313)
T ss_dssp             CCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCS-------------TT--TTCCBCTTCEEEEEEBCCCCEE
T ss_pred             CeEEEECCCEEEEEEEECCCCCccEeecCCcCCc--cCCCC-------------cc--ccCCcCCCCEEEEEEEeccCCc
Confidence            3488999999999999998889999999987521  11221             11  11237899999999987654  


Q ss_pred             -----------eeeEEEeeehh------hhccCceEEEEEEcCc
Q 020366          277 -----------GMWNMRSAIWE------RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       277 -----------G~W~~HCHi~~------h~~~Gm~~~~~v~~~~  303 (327)
                                 |.|.||||...      +...||...+.|..+.
T Consensus       105 ~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~  148 (313)
T 3tas_A          105 RADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG  148 (313)
T ss_dssp             CTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred             cccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence                       89999999732      3467999998886543

>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A

Probab=98.27  E-value=1.4e-06  Score=65.66  Aligned_cols=82  Identities=16%  Similarity=0.081  Sum_probs=58.3

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      ..+.++.|++|+|  .|.+...|.+++++..+-   .  | .+..   ..    ...++.+.+.+|+...+.|  +.||.
T Consensus        17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~--~-~~~~---~~----~~~~~~~~~~~G~~~~~tf--~~~G~   79 (99)
T 1plc_A           17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---S--G-VDAS---KI----SMSEEDLLNAKGETFEVAL--SNKGE   79 (99)
T ss_dssp             SEEEECTTCEEEE--EECSSCCBCCEECTTSSC---T--T-CCHH---HH----CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred             CEEEECCCCEEEE--EECCCCceEEEEeCCCCc---c--c-cccc---cc----ccccCccccCCCCEEEEEE--CCCce
Confidence            3478999999887  688778999999875431   0  1 0000   00    1123556778888887776  69999


Q ss_pred             eEEEeeehhhhccCceEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |.|||+.  |..+||...+.|
T Consensus        80 y~~~C~~--H~~~gM~G~i~V   98 (99)
T 1plc_A           80 YSFYCSP--HQGAGMVGKVTV   98 (99)
T ss_dssp             EEEECGG--GTTTTCEEEEEE
T ss_pred             EEEEcCC--CcccCCEEEEEE
Confidence            9999995  999999998876

>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*

Probab=98.25  E-value=3.1e-06  Score=83.43  Aligned_cols=88  Identities=15%  Similarity=0.031  Sum_probs=66.7

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCC-CCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~virf~adnpG~  278 (327)
                      ++++.|+.|++.+.|.. ...+.+|.||....--....|.             |.. ---.|+| |+..+-+|.++.+|.
T Consensus        69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~-------------~~~-tq~~I~P~G~~~~Y~f~~~q~GT  134 (559)
T 2q9o_A           69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA-------------NGV-TECPIPPKGGQRTYRWRARQYGT  134 (559)
T ss_dssp             EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC-------------BTT-TBCCBCTTTEEEEEEEECCSCEE
T ss_pred             EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC-------------Ccc-ccCccCCCCCeEEEEEECCCCEE
Confidence            78899999999999987 5689999999763100000110             000 0013788 999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEEcC
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      |.||||...+...||..++.|.++
T Consensus       135 ~wYH~H~~~q~~~Gl~G~liV~~~  158 (559)
T 2q9o_A          135 SWYHSHFSAQYGNGVVGTIQINGP  158 (559)
T ss_dssp             EEEEECSTTGGGGTCEEEEEEECC
T ss_pred             EEEEEcccchhcCCceEEEEecCC
Confidence            999999988899999999988754

>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*

Probab=98.22  E-value=4e-06  Score=81.62  Aligned_cols=89  Identities=11%  Similarity=0.067  Sum_probs=66.8

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ec
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LD  274 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-ad  274 (327)
                      ++++.|+.|++.+.|.-.     ..+.+|.||.+.    .+....+..         |.. ---.|+||+..+-+|. ++
T Consensus        36 i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~----~~~~~~DGv---------~~v-tq~~I~PG~~~~Y~f~~~~  101 (503)
T 1hfu_A           36 IRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQ----RGTNWADGA---------DGV-NQCPISPGHAFLYKFTPAG  101 (503)
T ss_dssp             EEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCC----TTCGGGSCC---------BTT-TBCCBCTTCEEEEEECCTT
T ss_pred             EEEeCCCEEEEEEEeCCCCccCCCcccEeccceec----cCCCccCCC---------ccc-ccCCcCCCCeEEEEEEeCC
Confidence            678899999999999876     789999999763    110000000         000 0013789999999999 68


Q ss_pred             CCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          275 NQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .+|.+.||||...+...||...+.|.++.
T Consensus       102 ~~GT~wYH~H~~~q~~~Gl~G~liV~~~~  130 (503)
T 1hfu_A          102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDN  130 (503)
T ss_dssp             CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred             CCccEEEEecchhhhhCcceeeEEEcCCC
Confidence            89999999999888889999999987654

>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A

Probab=98.20  E-value=2.5e-06  Score=81.64  Aligned_cols=76  Identities=13%  Similarity=0.239  Sum_probs=65.7

Q ss_pred             EEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      .+.++.| +++|.|.|.+. ..|.||++||.|+|++.+.+.          +..|...|++.|.+|+.+.|-+.++++|.
T Consensus       189 ~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~----------~~~p~~~~~l~l~pgeR~dv~v~~~~~G~  257 (439)
T 2xu9_A          189 TLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGF----------LEEPLEVSELLLAPGERAEVLVRLRKEGR  257 (439)
T ss_dssp             EEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEE----------EEEEEEESCEEECTTCEEEEEEECCSSEE
T ss_pred             cEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCC----------CCCceEeceEEECCceeEEEEEEcCCCce
Confidence            4678999 99999999975 469999999999999997431          22467889999999999999999999999


Q ss_pred             eEEEeeeh
Q 020366          279 WNMRSAIW  286 (327)
Q Consensus       279 W~~HCHi~  286 (327)
                      |.++|+..
T Consensus       258 ~~l~~~~~  265 (439)
T 2xu9_A          258 FLLQALPY  265 (439)
T ss_dssp             EEEEEECC
T ss_pred             EEEEeccc
Confidence            99999863

>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3

Probab=98.19  E-value=5.5e-06  Score=81.00  Aligned_cols=83  Identities=14%  Similarity=0.133  Sum_probs=67.1

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee------EEeCCCCEEEE
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT------AQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT------v~vp~~g~~vi  269 (327)
                      ++++.|+.|++.+.|.-.     ..+-+|.||....      +              +.+-|-      -.|+||+..+-
T Consensus        57 i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~------~--------------~~~~DGv~~vtq~~I~PG~s~~Y  116 (521)
T 1v10_A           57 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA------G--------------TTEMDGPAFVNQCPIIPNESFVY  116 (521)
T ss_dssp             EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT------T--------------CGGGSCCBTTTBCCBCTTEEEEE
T ss_pred             EEEeCCCEEEEEEEECCCCccCCCCceEecCCeecc------C--------------CCccCCCcceeeCCcCCCCeEEE
Confidence            788999999999999877     7899999998731      1              011111      13789999999


Q ss_pred             EEE-ecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          270 LVS-LDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       270 rf~-adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +|. ++.+|.+.||||...+...||...+.|.++.
T Consensus       117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~  151 (521)
T 1v10_A          117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN  151 (521)
T ss_dssp             EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred             EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence            999 6889999999999888889999999987654

>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}

Probab=98.19  E-value=3.7e-06  Score=76.37  Aligned_cols=88  Identities=17%  Similarity=0.171  Sum_probs=65.2

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD----  274 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad----  274 (327)
                      ++++++.|++|+|.+.|.....+.+|.||..+.  ....|.             |.-.  -.|+||+..+-+|++.    
T Consensus        58 P~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~-------------~~~~--~~i~PG~t~~Y~~~~~~~~~  120 (299)
T 3t9w_A           58 PVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGT-------------LMNG--SAVMPGQTRRYTWRSHVGYR  120 (299)
T ss_dssp             CCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCC-------------TTTT--CCBCTTCEEEEEEBCCCCEE
T ss_pred             ceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCC-------------cccc--CccCCCCeEEEEEEeecccc
Confidence            348899999999999999888999999998642  111221             1101  1378899999999875    


Q ss_pred             ---------CCeeeEEEeeehh------hhccCceEEEEEEcCc
Q 020366          275 ---------NQGMWNMRSAIWE------RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       275 ---------npG~W~~HCHi~~------h~~~Gm~~~~~v~~~~  303 (327)
                               .+|.|.||||...      +...||...+.|..+.
T Consensus       121 ~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~  164 (299)
T 3t9w_A          121 RADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG  164 (299)
T ss_dssp             CTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred             cCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccc
Confidence                     5699999999732      4567999999886543

>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3

Probab=98.17  E-value=2.8e-06  Score=77.47  Aligned_cols=93  Identities=15%  Similarity=0.076  Sum_probs=68.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCC--CceeeEEeCCCCEEEEEEEecCC-
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADT--LTRHTAQVYPQSWTVILVSLDNQ-  276 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p--~~rDTv~vp~~g~~virf~adnp-  276 (327)
                      ++.++.|++|+|.+.|.....+.+|.||..+-. + ..|..       + .+++  ..++...|+||+....+|.++.+ 
T Consensus        61 ~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~-~-~dG~~-------~-~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~  130 (306)
T 1sdd_A           61 TLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSK-F-SEGAS-------Y-SDHTLPMEKMDDAVAPGQEYTYEWIISEHS  130 (306)
T ss_dssp             CEEEETTCEEEEEEEECSSSCBCCEEESSCCCT-T-TSCCC-------S-CCCCCHHHHTTTCBCTTCEEEEEEECCGGG
T ss_pred             EEEEeCCCEEEEEEEECCCCcccEeecceeccc-c-cCCCc-------c-CCCCcccccCCCccCCCCeEEEEEEeCCcc
Confidence            488999999999999988888999999998422 1 12210       0 0111  12223568899999999999654 


Q ss_pred             ---------eeeEEEeeehh--hhccCceEEEEEEcC
Q 020366          277 ---------GMWNMRSAIWE--RQYLGQQFYLKVWNA  302 (327)
Q Consensus       277 ---------G~W~~HCHi~~--h~~~Gm~~~~~v~~~  302 (327)
                               |.|.||||...  +...||...+.|..+
T Consensus       131 gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~  167 (306)
T 1sdd_A          131 GPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK  167 (306)
T ss_dssp             SCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred             CCCCCCCCceEEEEeccCCchhhhccCceEEEEEccC
Confidence                     89999999755  557899888887644

>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*

Probab=98.12  E-value=1.5e-05  Score=77.46  Aligned_cols=90  Identities=13%  Similarity=0.139  Sum_probs=66.9

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-c
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-D  274 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-d  274 (327)
                      ++++.|++|++.+.|.-.     ..+-+|.||....--....|              ++.----.|+||+..+-+|.+ +
T Consensus        36 I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG--------------v~~vtq~pI~PG~s~tY~f~~~~  101 (499)
T 3pxl_A           36 VAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADG--------------PAFINQCPISPGHSFLYDFQVPD  101 (499)
T ss_dssp             EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTCEEEEEEECSS
T ss_pred             EEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccC--------------CCccccCCCCCCCeEEEEEEcCC
Confidence            788999999999999865     36899999986321000011              000000147899999999999 7


Q ss_pred             CCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          275 NQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      .+|.+.||||...+...||...+.|.++.+
T Consensus       102 ~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~  131 (499)
T 3pxl_A          102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPND  131 (499)
T ss_dssp             CCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred             CCceeeeeccchhHHhccceeEEEEcCCcc
Confidence            899999999998888899999999876543

>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*

Probab=98.11  E-value=1.8e-05  Score=76.79  Aligned_cols=85  Identities=15%  Similarity=0.041  Sum_probs=67.4

Q ss_pred             EEEecCCcEEEEEEEeCCCC-----cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeE------EeCCCCEEE
Q 020366          200 VMQVNLHEYIEVVFQNNEKT-----MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTA------QVYPQSWTV  268 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~-----~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv------~vp~~g~~v  268 (327)
                      +++++.|+.|++.+.|.-..     .+-+|.||....      +              +.|-|-+      .|+||+..+
T Consensus        36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~------~--------------~~~~DGv~~vtq~pI~PG~sft   95 (495)
T 3t6v_A           36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQK------G--------------TNWADGPAFITQCPIIVGNSFS   95 (495)
T ss_dssp             EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT------T--------------CGGGSCCBTTTBCCBCTTCEEE
T ss_pred             eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccC------C--------------CccccCCCccccCCCCCCCeEE
Confidence            47889999999999998653     688999998732      1              1112211      478999999


Q ss_pred             EEEEe-cCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          269 ILVSL-DNQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       269 irf~a-dnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      -+|.+ +.+|.+.||||...+...||...+.|.++.+
T Consensus        96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~  132 (495)
T 3t6v_A           96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPND  132 (495)
T ss_dssp             EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred             EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccc
Confidence            99999 7899999999998888899999999876543

>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A

Probab=98.08  E-value=1.9e-05  Score=64.51  Aligned_cols=82  Identities=13%  Similarity=0.095  Sum_probs=58.2

Q ss_pred             EEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee-------EEeCCCC--EEEE
Q 020366          200 VMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT-------AQVYPQS--WTVI  269 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT-------v~vp~~g--~~vi  269 (327)
                      .++++.|+.|.|++.|.+ ...|-+-++.       .+. .+..         .|...+.       ..|.||+  ...+
T Consensus        62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~sgt~t~  124 (154)
T 2cal_A           62 TLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAV---------MPVIDPIVAGTGFSPVPKDGKFGYTDF  124 (154)
T ss_dssp             EEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCS---------SCCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred             EEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhc---------cccccccccccccccccCCCCceEEEE
Confidence            478999999999999974 4555544442       221 1110         0111111       1567888  8899


Q ss_pred             EEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          270 LVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|.+ .||.+.||||+..|..+||-..++|
T Consensus       125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV  153 (154)
T 2cal_A          125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV  153 (154)
T ss_dssp             EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred             EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence            9999 9999999999988999999998876

>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}

Probab=98.08  E-value=1.3e-05  Score=78.66  Aligned_cols=89  Identities=17%  Similarity=0.130  Sum_probs=67.6

Q ss_pred             EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCee
Q 020366          201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~  278 (327)
                      ++++.|+.|++.+.|.-. ..+.+|.||.+...-....|.             |.. ---.|+||+..+-+|.++ .+|.
T Consensus        36 i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~-------------~~v-tq~pI~PG~~~~Y~f~~~~~~GT  101 (534)
T 1zpu_A           36 ITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGV-------------PFL-TQCPIAPGSTMLYNFTVDYNVGT  101 (534)
T ss_dssp             EEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCC-------------BTT-TBCCBCTTCEEEEEEECSSCCEE
T ss_pred             EEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCC-------------Ccc-ccCCcCCCCeEEEEEEeCcccee
Confidence            788999999999999876 889999999773210000110             000 001378999999999998 9999


Q ss_pred             eEEEeeehhhhccCceEEEEEEcCc
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +.||||...+...||...+.|.++.
T Consensus       102 ~wYH~H~~~q~~~Gl~G~liV~~~~  126 (534)
T 1zpu_A          102 YWYHSHTDGQYEDGMKGLFIIKDDS  126 (534)
T ss_dssp             EEEECCSSSGGGGTCEEEEEEECTT
T ss_pred             EEEEEcCcccccCcceeeEEeCCCC
Confidence            9999999888899999999887553

>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}

Probab=98.07  E-value=1.6e-05  Score=78.46  Aligned_cols=89  Identities=13%  Similarity=-0.021  Sum_probs=67.4

Q ss_pred             EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      ++++.|+.|++.+.|.-. ...-+|.||....    +. .|....        |.. ---.|+||+..+-+|.++.+|.+
T Consensus       100 I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~----~t-~~~DGv--------p~v-Tq~pI~PG~sftY~f~~~q~GT~  165 (580)
T 3sqr_A          100 IIADWGDNLIIHVTNNLEHNGTSIHWHGIRQL----GS-LEYDGV--------PGV-TQCPIAPGDTLTYKFQVTQYGTT  165 (580)
T ss_dssp             EEEETTCEEEEEEEECCSSCCBCEEETTCCCT----TC-GGGSCC--------BTT-TBCCBCTTCEEEEEEECCCCEEE
T ss_pred             EEEeCCCEEEEEEEECCCCCcceEEecccccC----CC-ccccCC--------Ccc-ccCCCCCCCeEEEEEECCCCcce
Confidence            788999999999999876 6799999998631    10 110000        000 00137899999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .||||...+...||...+.|.++.
T Consensus       166 WYHsH~~~q~~~GL~G~lIV~~p~  189 (580)
T 3sqr_A          166 WYHSHFSLQYGDGLFGPLIINGPA  189 (580)
T ss_dssp             EEEECSTTGGGGTCEEEEEEECCC
T ss_pred             EEeecccccccCcCEEEEEeeCcc
Confidence            999999888889999999887553

>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A

Probab=98.07  E-value=5e-06  Score=79.81  Aligned_cols=85  Identities=13%  Similarity=0.100  Sum_probs=68.3

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-Cee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-QGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-pG~  278 (327)
                      +++++.|+.|++.+.|.-...+.+|.||....  ....|.             |    --.|+||+..+-+|.++. +|.
T Consensus        51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------~----~~~i~PG~~~~Y~f~~~~~~GT  111 (451)
T 2uxt_A           51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVP--GPLMGG-------------P----ARMMSPNADWAPVLPIRQNAAT  111 (451)
T ss_dssp             EEEEETTCEEEEEEEECSSSCBCEEEETCCCC--GGGSCS-------------G----GGCBCTTCEECCEEECCSCSEE
T ss_pred             eEEEeCCCEEEEEEEECCCCCccEEECCccCC--CCCCCC-------------C----cCcCCCCCeEEEEEEcCCCCcc
Confidence            47889999999999999888999999997732  111120             1    135789999999999987 999


Q ss_pred             eEEEeee----hhhhccCceEEEEEEcCc
Q 020366          279 WNMRSAI----WERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi----~~h~~~Gm~~~~~v~~~~  303 (327)
                      |.||||.    ..+...||..++.|.++.
T Consensus       112 ~wYH~H~~~~t~~q~~~Gl~G~liV~~~~  140 (451)
T 2uxt_A          112 LWYHANTPNRTAQQVYNGLAGMWLVEDEV  140 (451)
T ss_dssp             EEEEECCTTTHHHHHHTTCEEEEEEECHH
T ss_pred             eEEecCCCCchhhhHhhcceEEEEEecCc
Confidence            9999998    667889999999987554

>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...

Probab=98.06  E-value=1.7e-05  Score=60.30  Aligned_cols=70  Identities=10%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|+|+  |.+...|-+|.|+..       .|.             +.+ ++-.+.+|+...+.|  +.||.+.
T Consensus        35 i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y~   89 (105)
T 2ov0_A           35 LHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTYD   89 (105)
T ss_dssp             EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEEE
T ss_pred             EEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEEE
Confidence            688999999885  877788999988522       121             001 122366777766666  8999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |||++  |.  ||...+.|
T Consensus        90 y~C~~--H~--gM~G~i~V  104 (105)
T 2ov0_A           90 YHCTP--HP--FMRGKVVV  104 (105)
T ss_dssp             EECSS--CT--TCEEEEEE
T ss_pred             EEeCC--CC--CCEEEEEE
Confidence            99998  65  88888776

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.04  E-value=2e-05  Score=77.48  Aligned_cols=76  Identities=12%  Similarity=0.149  Sum_probs=59.3

Q ss_pred             eEEEecCCcEEEEEEEeCCC---CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC
Q 020366          199 SVMQVNLHEYIEVVFQNNEK---TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN  275 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~---~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn  275 (327)
                      ..+.++.|+.|+|.+.|.+.   ..|.|+++++.+.                           ..+.||+...++|.++.
T Consensus       513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~  565 (595)
T 1fwx_A          513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN  565 (595)
T ss_dssp             SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred             CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence            45789999999999999753   4788888875321                           35777888899999999


Q ss_pred             CeeeEEEeeeh-hhhccCceEEEEEEc
Q 020366          276 QGMWNMRSAIW-ERQYLGQQFYLKVWN  301 (327)
Q Consensus       276 pG~W~~HCHi~-~h~~~Gm~~~~~v~~  301 (327)
                      ||.|.||||.. ...|.||...+.|..
T Consensus       566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p  592 (595)
T 1fwx_A          566 PGVYWYYCQWFCHALHMEMRGRMLVEP  592 (595)
T ss_dssp             CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred             CEEEEEECCCCCCCCccCCEEEEEEEc
Confidence            99999999931 123459999998864

>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}

Probab=97.99  E-value=1.2e-05  Score=77.06  Aligned_cols=86  Identities=12%  Similarity=0.109  Sum_probs=68.5

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~  278 (327)
                      +++++.|+.|++.+.|.-...+-+|.||...-  ....|.             |.    -.|+||+..+-+|.++ .+|.
T Consensus        39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------~~----~~i~PG~~~~Y~f~~~~~~GT   99 (448)
T 3aw5_A           39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAH-------------PS----FAITPGESYNYSFDVVNRAGT   99 (448)
T ss_dssp             EEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTC-------------GG----GCBCTTCEEEEEEECCSCSEE
T ss_pred             eEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCC-------------CC----ccCCCCCEEEEEEEcCCCCCc
Confidence            37889999999999999888999999998731  111120             11    3578999999999998 7999


Q ss_pred             eEEEee----ehhhhccCceEEEEEEcCcc
Q 020366          279 WNMRSA----IWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       279 W~~HCH----i~~h~~~Gm~~~~~v~~~~~  304 (327)
                      +.||||    ...+...||...+.|.++.+
T Consensus       100 ~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~  129 (448)
T 3aw5_A          100 YLYHPHPHGLTAKQFYMGQLGLVIVEDSGS  129 (448)
T ss_dssp             EEEEECCTTTHHHHHHTTCCEEEEEECTTT
T ss_pred             eEeccCCCCchHHHHhccceEEEEEeCCcc
Confidence            999999    66778899999998876543

>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...

Probab=97.93  E-value=2e-05  Score=76.15  Aligned_cols=86  Identities=10%  Similarity=0.088  Sum_probs=67.5

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-ee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-GM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-G~  278 (327)
                      ++.++.|+.|++.+.|.-...+.+|+||...-  ....|.             |    --.|+||+...-+|.++.| |.
T Consensus        49 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~-------------p----~~~i~PG~~~~Y~f~~~~~aGT  109 (488)
T 3od3_A           49 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGG-------------P----QGIIPPGGKRSVTLNVDQPAAT  109 (488)
T ss_dssp             EEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCC-------------T----TCCBCTTCEEEEEEECCSCSEE
T ss_pred             eEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCC-------------C----cCcCcCCCeEEEEEecCCCcee
Confidence            47889999999999999888999999999742  111121             1    1257899999999999885 99


Q ss_pred             eEEEeee----hhhhccCceEEEEEEcCcc
Q 020366          279 WNMRSAI----WERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       279 W~~HCHi----~~h~~~Gm~~~~~v~~~~~  304 (327)
                      +.||||.    ..+...||...+.|.++.+
T Consensus       110 ~wYH~H~~~~t~~q~~~GL~G~liV~~~~~  139 (488)
T 3od3_A          110 CWFHPHQHGKTGRQVAMGLAGLVVIEDDEI  139 (488)
T ss_dssp             EEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred             EEEEecCCCcchhhhhccceeEEEEcCccc
Confidence            9999997    4567789999998875543

>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}

Probab=97.91  E-value=2.2e-05  Score=75.80  Aligned_cols=85  Identities=11%  Similarity=0.135  Sum_probs=67.0

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC--Cee
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN--QGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn--pG~  278 (327)
                      ++++.|+.|++.+.|.-...+.+|+||...  -....|.             |    --.|+||+..+-+|.++.  +|.
T Consensus        84 Ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~-------------p----q~~I~PG~s~~Y~f~~~~~~~GT  144 (481)
T 3zx1_A           84 IEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGS-------------P----HDPILAGEERIYRFEIPQDSAGT  144 (481)
T ss_dssp             EEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------T----TSCBCTTCEEEEEEECCTTCCEE
T ss_pred             EEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCC-------------c----cCcCCCCCeEEEEEeCCCCCCce
Confidence            788999999999999988899999999973  1111120             1    125789999999999976  799


Q ss_pred             eEEEeee----hhhhccCceEEEEEEcCcc
Q 020366          279 WNMRSAI----WERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       279 W~~HCHi----~~h~~~Gm~~~~~v~~~~~  304 (327)
                      +.||||.    ..+...||...+.|.++.+
T Consensus       145 ~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~  174 (481)
T 3zx1_A          145 YWYHPHPHYTASKQVFMGLAGAFVIKAKKD  174 (481)
T ss_dssp             EEEECCCTTTHHHHHHTTCCEEEEEECSSC
T ss_pred             EEEeecCCCcchhhhhccceEEEEEcCccc
Confidence            9999996    4577889999998876543

>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*

Probab=97.74  E-value=5.6e-05  Score=74.00  Aligned_cols=87  Identities=20%  Similarity=0.083  Sum_probs=65.5

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-e
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-G  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-G  277 (327)
                      ++++++.|+.|++.+.|.....+.+|.||....  ....|.          ..+       .|+||+..+-+|.++.+ |
T Consensus        69 PtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~----------~~~-------~i~PG~~~~Y~f~~~~~~G  129 (534)
T 3abg_A           69 PTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGW----------AED-------ITEPGSFKDYYYPNRQSAR  129 (534)
T ss_dssp             EEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTC----------SSS-------CBSSCSCCCEEECCCSSSC
T ss_pred             ceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCC----------CCC-------CCCCCCeEEEEEecCCcce
Confidence            457899999999999999888999999998621  111120          011       27899999999999875 7


Q ss_pred             eeEEEeeehh----hhccCceEEEEEEcCcc
Q 020366          278 MWNMRSAIWE----RQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       278 ~W~~HCHi~~----h~~~Gm~~~~~v~~~~~  304 (327)
                      .+.||||...    +...||..++.|.++.+
T Consensus       130 T~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~  160 (534)
T 3abg_A          130 TLWYHDHAMHITAENAYRGQAGLYMLTDPAE  160 (534)
T ss_dssp             EEEEEECCTTCHHHHHHTBCEEEEEEECTTT
T ss_pred             eEEEecCccccchhhhhhcceEEEEEECCcc
Confidence            9999999942    45689999998876543

>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*

Probab=97.70  E-value=1.6e-05  Score=81.07  Aligned_cols=89  Identities=15%  Similarity=0.088  Sum_probs=68.7

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD----  274 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad----  274 (327)
                      +++.++.|++|++.+.|.....+.+|.||..+..-.. .|.             |.-  --.|+||+..+-+|.+.    
T Consensus       199 P~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~-------------~~~--~~~I~PG~~~tY~f~~~~~~g  262 (770)
T 2r7e_B          199 PYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGA-------------EPR--KNFVKPNETKTYFWKVQHHMA  262 (770)
T ss_dssp             CCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCT-------------TTT--SSCCCSSCEEEEECCCCSSSS
T ss_pred             CeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCC-------------cCc--cCccCCCCeEEEEEEecCccC
Confidence            4578899999999999998889999999998643221 121             110  12478999999999987    


Q ss_pred             ------CCeeeEEEeeehh--hhccCceEEEEEEcCc
Q 020366          275 ------NQGMWNMRSAIWE--RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       275 ------npG~W~~HCHi~~--h~~~Gm~~~~~v~~~~  303 (327)
                            .+|.|.||||...  +...||...+.|..+.
T Consensus       263 p~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~  299 (770)
T 2r7e_B          263 PTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN  299 (770)
T ss_dssp             CCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred             CccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence                  7899999999955  5678999999886543

>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A

Probab=97.62  E-value=0.00011  Score=57.57  Aligned_cols=75  Identities=9%  Similarity=0.047  Sum_probs=50.8

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|.|++.|.   .|-+..+.          +.+.. .           .+.+.+.+++...+.|  +.||.|
T Consensus        22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~P~-g-----------~~~f~~~pg~t~s~TF--~~pG~y   74 (123)
T 3erx_A           22 FVRAEPGDVINFVPTDK---SHNVEAIK----------EILPE-G-----------VESFKSKINESYTLTV--TEPGLY   74 (123)
T ss_dssp             EEEECTTEEEEEEESST---TCCCEECT----------TSSCT-T-----------CCCCBCCTTCCEEEEE--CSCEEE
T ss_pred             EEEECCCCEEEEEECCC---CceEEEcC----------CcCCC-C-----------ccceecCCCCEEEEEe--CCCeEE
Confidence            37899999999998773   34443331          11110 0           0111234677666666  899999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .|+|-.  |..+||-..++|.++.
T Consensus        75 ~y~C~~--H~~~GM~G~I~V~~~~   96 (123)
T 3erx_A           75 GVKCTP--HFGMGMVGLVQVGDAP   96 (123)
T ss_dssp             EEECGG--GTTTTCEEEEEESSSC
T ss_pred             EEEeCC--CCcCCcEEEEEECCCC
Confidence            999997  9999999999998633

>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}

Probab=97.60  E-value=6.3e-05  Score=59.26  Aligned_cols=75  Identities=12%  Similarity=0.046  Sum_probs=49.7

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|.|++.|.   .|-+..+.          +.+..            -...+.+.+++...+.|  +.||.|
T Consensus        24 ~i~V~~GDtVtf~n~~~---~H~v~~~~----------~~~P~------------g~~~f~s~pGet~s~TF--~~pG~y   76 (127)
T 3tu6_A           24 VIRAQPGDTVTFVAKDK---GHNSALMK----------GGAPE------------GAETWKGKINEEITVTL--SKPGVY   76 (127)
T ss_dssp             EEEECTTCEEEEECSSS---SCCCEECT----------TCSCT------------TCCCCBCCTTCCCEEEC--CSCEEE
T ss_pred             EEEECCCCEEEEEECCC---CceEEEcc----------CcCCC------------CccceecCCCCEEEEEe--CCCeEE
Confidence            47899999999887663   34433321          11100            00111224566655555  899999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .|||-.  |..+||...+.|.++.
T Consensus        77 ~y~C~~--H~~~GM~G~I~V~~~~   98 (127)
T 3tu6_A           77 MYQCAP--HVGMGMIGAIVVGEPA   98 (127)
T ss_dssp             EEECTT--TGGGTCEEEEEESSCT
T ss_pred             EEEeCC--CCcCCcEEEEEECcCC
Confidence            999996  9999999999998654

>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0

Probab=97.51  E-value=0.00018  Score=56.37  Aligned_cols=75  Identities=12%  Similarity=0.127  Sum_probs=51.2

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|+|+..+   ..|-+..+.          +.+.            .-.+.+.+.+++...+.|  +.||.|
T Consensus        23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~----------~~~p------------~g~~~~~~~pg~t~s~TF--~~~G~y   75 (124)
T 3ef4_A           23 FVKVEAGDTVKFVPTD---KSHNAESVR----------EVWP------------EGVAPVKGGFSKEVVFNA--EKEGLY   75 (124)
T ss_dssp             EEEECTTCEEEEECSS---SSCCCEECT----------TTSC------------TTSCCCBCCTTCCEEEEC--CSSEEE
T ss_pred             EEEECCCCEEEEEECC---CCccEEEeC----------CcCC------------CCccccccCCCCEEEEEe--CCCeEE
Confidence            3789999999988543   556555442          1111            001122344667666666  899999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .|||-.  |..+||...++|.+|.
T Consensus        76 ~Y~C~~--H~~~GM~G~I~V~~p~   97 (124)
T 3ef4_A           76 VLKCAP--HYGMGMVVLVQVGKPV   97 (124)
T ss_dssp             EEECTT--TGGGTCEEEEEESSCT
T ss_pred             EEEcCC--CCcCCCEEEEEECCCC
Confidence            999986  9999999999998753

>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A

Probab=97.47  E-value=0.00067  Score=50.56  Aligned_cols=80  Identities=19%  Similarity=0.141  Sum_probs=54.7

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      ..+.++.|++|+|+  |.+...|-+.+...          .+..    ..+. ...-.+...+.+|+...+.|  +.||.
T Consensus        18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~   78 (98)
T 1iuz_A           18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AVPA----GVDA-DAISYDDYLNSKGETVVRKL--STPGV   78 (98)
T ss_dssp             SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SSCT----TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred             CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCcc----cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence            34789999999886  76667776665541          1100    0000 00123456788888877777  89999


Q ss_pred             eEEEeeehhhhccCceEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      +.|+|-+  |..+||...+.|
T Consensus        79 y~y~C~~--H~~~gM~G~I~V   97 (98)
T 1iuz_A           79 YGVYCEP--HAGAGMKMTITV   97 (98)
T ss_dssp             EEEECTT--TGGGTCEEEEEE
T ss_pred             EEEEchh--hccCCCEEEEEE
Confidence            9999998  888899888876

>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A

Probab=97.34  E-value=0.00031  Score=68.39  Aligned_cols=90  Identities=13%  Similarity=-0.015  Sum_probs=60.3

Q ss_pred             EEecCCcEEEEEEEeCCCC----------------------cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceee
Q 020366          201 MQVNLHEYIEVVFQNNEKT----------------------MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHT  258 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~----------------------~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDT  258 (327)
                      ++++.|+.|++.+.|.-..                      .+-+|+||...-  ....|.-       -+...|.    
T Consensus        60 I~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p-------~~~i~~g----  126 (513)
T 2wsd_A           60 IEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYP-------EAWFSKD----  126 (513)
T ss_dssp             EEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCT-------TSCBCGG----
T ss_pred             EEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCC-------cccccCC----
Confidence            7889999999999997643                      677999998632  1112210       0000010    


Q ss_pred             EEeCCC---CEEEEEEEec-CCeeeEEEeeehh----hhccCceEEEEEEcCcc
Q 020366          259 AQVYPQ---SWTVILVSLD-NQGMWNMRSAIWE----RQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       259 v~vp~~---g~~virf~ad-npG~W~~HCHi~~----h~~~Gm~~~~~v~~~~~  304 (327)
                       -|++|   +..+-+|.++ .+|.+.||||...    +...||..++.|..+.+
T Consensus       127 -~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~  179 (513)
T 2wsd_A          127 -FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE  179 (513)
T ss_dssp             -GSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred             -cccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc
Confidence             13345   5568899886 6899999999842    45679999998875543

>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1

Probab=97.31  E-value=0.001  Score=50.38  Aligned_cols=70  Identities=11%  Similarity=-0.004  Sum_probs=48.8

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|+|+  |.+...|-+++....       .|.              ..-++-.+.+|+...+.|  +.||.+.
T Consensus        36 i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~--------------~~~~s~~l~~g~~~~~tf--~~~G~y~   90 (106)
T 1id2_A           36 VTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF--NEAGSYD   90 (106)
T ss_dssp             EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--CSCEEEE
T ss_pred             EEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEe--CCCEEEE
Confidence            688999999887  777777776655422       010              001223456777777776  8999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |+|-+  |.  ||...+.|
T Consensus        91 ~~C~~--H~--~M~G~I~V  105 (106)
T 1id2_A           91 YFCTP--HP--FMRGKVIV  105 (106)
T ss_dssp             EECSS--CT--TCEEEEEE
T ss_pred             EEeCC--CC--CCEEEEEE
Confidence            99998  65  88888876

>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.14  E-value=0.0017  Score=51.27  Aligned_cols=70  Identities=11%  Similarity=0.006  Sum_probs=49.6

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|+|+  |.+...|-+++....       .|.             .. -++-.+.+|+...+.|  +.||.+.
T Consensus        62 i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~~-~~s~~l~pG~t~~~tF--~~~G~y~  116 (132)
T 3c75_A           62 VTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------DA-FRGEMMTKDQAYAITF--NEAGSYD  116 (132)
T ss_dssp             EEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SC-EECCCBCTTEEEEEEE--CSCEEEE
T ss_pred             EEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------cc-ccccccCCCCEEEEEc--CCCEEEE
Confidence            688999999886  777777877764321       010             01 1233467777777777  8999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |||-+  |.  ||...+.|
T Consensus       117 y~C~~--H~--gM~G~I~V  131 (132)
T 3c75_A          117 YFCTP--HP--FMRGKVIV  131 (132)
T ss_dssp             EECSS--CT--TCEEEEEE
T ss_pred             EEeCC--Cc--CCEEEEEE
Confidence            99998  66  89888876

>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*

Probab=97.13  E-value=0.00098  Score=52.05  Aligned_cols=38  Identities=13%  Similarity=0.117  Sum_probs=30.4

Q ss_pred             CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          262 YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       262 p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .+|+...+.|  +.||.|.|+|-.  |..+||...+.|.++.
T Consensus        59 ~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~~~   96 (123)
T 1paz_A           59 KINENYVLTV--TQPGAYLVKCTP--HYAMGMIALIAVGDSP   96 (123)
T ss_dssp             CTTCCEEEEC--CSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred             CCCCEEEEEe--CCCEEEEEEeCC--cccCCCEEEEEEcCCC
Confidence            4566555555  899999999986  9999999999997643

>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1

Probab=97.11  E-value=0.001  Score=52.01  Aligned_cols=39  Identities=15%  Similarity=0.198  Sum_probs=31.2

Q ss_pred             eCCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          261 VYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       261 vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +.+|+...+.|  +.||.|.|+|-.  |..+||...+.|.++.
T Consensus        58 ~~pG~t~~~tF--~~~G~y~y~C~~--H~~~gM~G~I~V~~~~   96 (123)
T 1pmy_A           58 TTVGQEAVVKF--DKEGVYGFKCAP--HYMMGMVALVVVGDKR   96 (123)
T ss_dssp             CCTTSCEEEEC--CSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred             cCCCCEEEEEe--CCCeEEEEEeCC--ccccCCEEEEEEcCCC
Confidence            34666655555  899999999986  9999999999997643

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.63  E-value=0.011  Score=57.44  Aligned_cols=75  Identities=12%  Similarity=0.084  Sum_probs=57.4

Q ss_pred             eEEEecCCcEEEEEEEeCC---CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC
Q 020366          199 SVMQVNLHEYIEVVFQNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN  275 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~---~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn  275 (327)
                      ..+.++.|+.|+|++.|.+   +..|.|.+.++...                           +.+.||....+.|.++.
T Consensus       558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtadk  610 (638)
T 3sbq_A          558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVADK  610 (638)
T ss_dssp             CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred             CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcCC
Confidence            3567999999999999974   56777776654322                           14567778889999999


Q ss_pred             CeeeEEEeeehhhh-ccCceEEEEEE
Q 020366          276 QGMWNMRSAIWERQ-YLGQQFYLKVW  300 (327)
Q Consensus       276 pG~W~~HCHi~~h~-~~Gm~~~~~v~  300 (327)
                      ||.+.+||...-|. |.+|...+.|.
T Consensus       611 PGvY~y~CSE~CGa~Hs~M~G~ViVE  636 (638)
T 3sbq_A          611 PGLHWYYCSWFCHALHMEMVGRMMVE  636 (638)
T ss_dssp             CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred             CEEEEEECCCcCCCCcccceEEEEEe
Confidence            99999999975443 67788888764

>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A

Probab=96.53  E-value=0.0067  Score=47.16  Aligned_cols=73  Identities=8%  Similarity=0.069  Sum_probs=46.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|++|.|+  |.+. .|-+++..          |.+... .           ..+.+.+++...+.|  +.||.+
T Consensus        22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~~-~-----------~~~~~~~g~t~~~tF--~~~G~y   74 (122)
T 2ux6_A           22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPDG-A-----------EAFKSKINENYKVTF--TAPGVY   74 (122)
T ss_dssp             EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCTT-C-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred             EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCCC-c-----------ceeecCCCCEEEEEe--CCCEEE
Confidence            4788999999887  4433 45554443          111100 0           011234666666666  899999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .|+|-+  |..  |...+.|.++.
T Consensus        75 ~y~C~~--H~~--M~G~I~V~~~p   94 (122)
T 2ux6_A           75 GVKCTP--HPF--MVGVVQVGDAP   94 (122)
T ss_dssp             EEEETT--EEE--EEEEEEESSSC
T ss_pred             EEEeCC--Ccc--CEEEEEEeCCC
Confidence            999988  666  98999887643

>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}

Probab=96.52  E-value=0.0024  Score=63.28  Aligned_cols=105  Identities=10%  Similarity=-0.041  Sum_probs=65.1

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccc----------------cccC---CCCCCCceeeE-
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEK----------------RRTY---NLADTLTRHTA-  259 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~----------------~~~~---n~~~p~~rDTv-  259 (327)
                      +++++.|+.|++.+.|.-...+-+|.||....--..+.+.-....                ....   -+..+..-|-+ 
T Consensus        66 ti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~~DGv~  145 (612)
T 3gyr_A           66 TIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWA  145 (612)
T ss_dssp             EEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCG
T ss_pred             EEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCccCCcccCcc
Confidence            478899999999999987777777777754321111111000000                0000   00011122222 


Q ss_pred             --EeCCCCEEEEEEEecCC-eeeEEEeee----hhhhccCceEEEEEEcCcc
Q 020366          260 --QVYPQSWTVILVSLDNQ-GMWNMRSAI----WERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       260 --~vp~~g~~virf~adnp-G~W~~HCHi----~~h~~~Gm~~~~~v~~~~~  304 (327)
                        .|+||+..+-+|.++.+ |.+.||+|.    ..+...||...+.|.++.+
T Consensus       146 q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~  197 (612)
T 3gyr_A          146 DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEE  197 (612)
T ss_dssp             GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHH
T ss_pred             cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccc
Confidence              37899999999999876 789999997    3466789999998876544

>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}

Probab=96.34  E-value=0.013  Score=48.13  Aligned_cols=94  Identities=7%  Similarity=0.028  Sum_probs=60.0

Q ss_pred             EEe-cCCcEEEEEEEeCCCCc-CceeecCCCeEEEEeccCCCCcc-----ccccCCC----CCCCceeeEEeCCCCEEEE
Q 020366          201 MQV-NLHEYIEVVFQNNEKTM-QSWHLDGYDFWVVGYGSGQWAAE-----KRRTYNL----ADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~-HP~HLHG~~F~Vl~~g~G~~~~~-----~~~~~n~----~~p~~rDTv~vp~~g~~vi  269 (327)
                      +++ +.|+.|.|+|.|.+... --|   +|.|-+...+  .+...     .....++    +......+..|.+|+...|
T Consensus        60 itV~kaG~~Vtv~~~N~g~~p~~~m---~Hn~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv  134 (167)
T 3ay2_A           60 IQVSKACKEFTITLKHTGTQPKASM---GHNLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL  134 (167)
T ss_dssp             EEEETTCSSEEEEEEECSCSCHHHH---CBCCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred             EEEecCCCEEEEEEEECCCCccccc---cceEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence            788 89999999999997653 001   1334333322  11000     0000011    0012345667899999999


Q ss_pred             EEEec--CCeeeEEEeeehhhhccCceEEEEEE
Q 020366          270 LVSLD--NQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       270 rf~ad--npG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .|.++  .||.+-|+|-+--|+. ||-..++|.
T Consensus       135 tf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~  166 (167)
T 3ay2_A          135 TLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV  166 (167)
T ss_dssp             EECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred             EEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence            99988  8999999999877877 888888875

>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A

Probab=96.23  E-value=0.029  Score=43.98  Aligned_cols=95  Identities=9%  Similarity=-0.008  Sum_probs=60.0

Q ss_pred             EEecCC-cEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc------ccccCCC----CCCCceeeEEeCCCCEEEE
Q 020366          201 MQVNLH-EYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE------KRRTYNL----ADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~~~g-~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~----~~p~~rDTv~vp~~g~~vi  269 (327)
                      ++++.| +.|.|++.|.+....  --=+|.|-+...+  .+...      .....++    +.-....+..|.||+...+
T Consensus        20 i~V~~G~~~vtv~~~N~g~~~~--~~m~H~~vi~~~~--~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~sv   95 (129)
T 1cuo_A           20 ISVPASCAEFTVNFEHKGHMPK--TGMGHNWVLAKSA--DVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV   95 (129)
T ss_dssp             EEEETTCSEEEEEEEECSSSCH--HHHCBCCEEEEGG--GHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred             EEEcCCCeEEEEEEEECCCCcc--cccccceEEecCc--chhhhHHHhhhccccccccccccccceeeeeEECCCCEEEE
Confidence            789999 999999999975430  0002344443322  10000      0000011    0012235667899999999


Q ss_pred             EEEec---CCeeeEEEeeehhhhccCceEEEEEE
Q 020366          270 LVSLD---NQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       270 rf~ad---npG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .|.++   .||.+-|.|-+--|+. ||-..+.|.
T Consensus        96 tf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~  128 (129)
T 1cuo_A           96 KFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE  128 (129)
T ss_dssp             EEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred             EEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence            99997   9999999998877777 788888774

>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*

Probab=95.93  E-value=0.047  Score=43.10  Aligned_cols=72  Identities=14%  Similarity=0.166  Sum_probs=49.7

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|+|++.|.+ ..|.       |+|-+.             +    ..   +.+.||....+.|.++.||.+.
T Consensus        62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~-------------~----~k---~d~~PG~~~~~~~~~~~~G~y~  113 (135)
T 2cua_A           62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGT-------------N----IN---VEVLPGEVSTVRYTFKRPGEYR  113 (135)
T ss_dssp             EEEETTSEEEEEEEBSS-SCEE-------EEETTS-------------S----CE---EEECBTBCEEEEEECCSCEEEE
T ss_pred             EEEcCCCEEEEEEEeCC-ccce-------EEecCC-------------C----ce---eEeCCCCcEEEEEEcCCCEEEE
Confidence            67899999999999975 4443       444111             1    11   2345666678899999999999


Q ss_pred             EEeeehh-hhccCceEEEEEE
Q 020366          281 MRSAIWE-RQYLGQQFYLKVW  300 (327)
Q Consensus       281 ~HCHi~~-h~~~Gm~~~~~v~  300 (327)
                      ++|...- .-|.+|-..+.|.
T Consensus       114 ~~C~e~CG~~H~~M~g~v~V~  134 (135)
T 2cua_A          114 IICNQYCGLGHQNMFGTIVVK  134 (135)
T ss_dssp             EECCSCCSTTSTTCEEEEEEE
T ss_pred             EECcccCCCCcCCCEEEEEEE
Confidence            9996522 2346788887764

>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...

Probab=95.46  E-value=0.09  Score=43.05  Aligned_cols=72  Identities=11%  Similarity=0.146  Sum_probs=52.6

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|+|.++|. +..|.|.+=+...                        ..   .+-||....+.|.++.||.+.
T Consensus        95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------------------k~---da~PG~~n~~~~~~~kpG~y~  146 (168)
T 3s8f_B           95 IEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------------------NV---EVLPGEVSTVRYTFKRPGEYR  146 (168)
T ss_dssp             EEEETTSEEEEEEECS-SSCEEEEETTSSC------------------------EE---EECTTBCEEEEEECCSCEEEE
T ss_pred             EEEeCCCeEEEEEecC-CceEEEEECCCCe------------------------EE---EecCCceeEEEEEeCCCEEEE
Confidence            6789999999999997 4556554432211                        12   234566677889999999999


Q ss_pred             EEeee-hhhhccCceEEEEEE
Q 020366          281 MRSAI-WERQYLGQQFYLKVW  300 (327)
Q Consensus       281 ~HCHi-~~h~~~Gm~~~~~v~  300 (327)
                      +.|.. --+-|.+|-..+.|.
T Consensus       147 g~Cse~CG~~Hs~M~g~V~V~  167 (168)
T 3s8f_B          147 IICNQYCGLGHQNMFGTIVVK  167 (168)
T ss_dssp             EECCSCCSTTGGGCEEEEEEE
T ss_pred             EECCcCCCCCcCCCEEEEEEe
Confidence            99985 335678898888775

>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*

Probab=95.20  E-value=0.11  Score=40.65  Aligned_cols=95  Identities=9%  Similarity=0.002  Sum_probs=58.4

Q ss_pred             EEe-cCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc------ccccCCC---CC-CCceeeEEeCCCCEEEE
Q 020366          201 MQV-NLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE------KRRTYNL---AD-TLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~---~~-p~~rDTv~vp~~g~~vi  269 (327)
                      +++ +.|+.|.+++.|.+..+  ---=+|.|-+...+  .+...      ....-++   .+ -....|..|.+|+...+
T Consensus        19 i~V~k~G~~vtv~~~N~g~~p--~~~m~Hn~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~v   94 (128)
T 2iaa_C           19 IVVDKTCKEFTINLKHTGKLP--KAAMGHNVVVSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSV   94 (128)
T ss_dssp             EEECTTCSEEEEEEEECSCSC--HHHHCBCCEEEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred             EEEecCCcEEEEEEEECCCCc--ccCCCceEEEcccc--chhhHHHhhhhccccccccccccchhhccceeeCCCCEEEE
Confidence            688 88999999999997653  00001233332211  10000      0000011   01 11235667899999999


Q ss_pred             EEEec--CCe-eeEEEeeehhhhccCceEEEEEE
Q 020366          270 LVSLD--NQG-MWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       270 rf~ad--npG-~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      .|.+.  .|| .+-|.|-+--|+. ||-..+.|.
T Consensus        95 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~  127 (128)
T 2iaa_C           95 TFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG  127 (128)
T ss_dssp             EEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred             EEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence            99998  899 5999999877877 898888774

>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A

Probab=95.18  E-value=0.12  Score=40.46  Aligned_cols=94  Identities=11%  Similarity=0.017  Sum_probs=58.5

Q ss_pred             EEe-cCCcEEEEEEEeCCCCc-CceeecCCCeEEEEeccCCCCcc------ccccCCCC---C-CCceeeEEeCCCCEEE
Q 020366          201 MQV-NLHEYIEVVFQNNEKTM-QSWHLDGYDFWVVGYGSGQWAAE------KRRTYNLA---D-TLTRHTAQVYPQSWTV  268 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~-HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~~---~-p~~rDTv~vp~~g~~v  268 (327)
                      +++ +.|+.|.+++.|.+... --|   +|.|-+...+  .+...      ....-++.   + .....+..|.||+...
T Consensus        20 i~V~k~G~~vtv~~~N~g~~p~~~m---~H~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s   94 (129)
T 2ccw_A           20 IVVDKSCKQFTMHLKHVGKMAKVAM---GHNLVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS   94 (129)
T ss_dssp             EEECTTCSEEEEEEEECSCCCHHHH---CBCCEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred             EEEecCCCEEEEEEEECCCcccccC---cceEEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence            788 88999999999997652 000   2334333322  11000      00000110   1 1123456789999999


Q ss_pred             EEEEec--CCee-eEEEeeehhhhccCceEEEEEE
Q 020366          269 ILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       269 irf~ad--npG~-W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      +-|.++  .||. +-|.|-+--|+. ||-..+.|.
T Consensus        95 vtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~  128 (129)
T 2ccw_A           95 VTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG  128 (129)
T ss_dssp             EEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred             EEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence            999998  8865 999998877877 898888774

>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A

Probab=94.94  E-value=0.13  Score=40.11  Aligned_cols=89  Identities=6%  Similarity=0.001  Sum_probs=57.3

Q ss_pred             EEe-cCCcEEEEEEEeCCCCc-----CceeecCCCeEEEEeccCCCCcc------ccccCCCC---C-CCceeeEEeCCC
Q 020366          201 MQV-NLHEYIEVVFQNNEKTM-----QSWHLDGYDFWVVGYGSGQWAAE------KRRTYNLA---D-TLTRHTAQVYPQ  264 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~-----HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~~---~-p~~rDTv~vp~~  264 (327)
                      +++ +.|+.|.|++.|.+..+     |-       |-+...+  .....      ....-++.   + .....|-.|.||
T Consensus        20 i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pG   90 (128)
T 1nwp_A           20 IAIDKSCKTFTVELTHSGSLPKNVMGHN-------LVISKEA--DMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAG   90 (128)
T ss_dssp             EEECTTCSEEEEEEEECSSCCHHHHCBC-------CEEEEGG--GHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTT
T ss_pred             EEEecCCCEEEEEEEECCCCcccCCCce-------EEEcccc--chhhHHHHHhhccccccccccccchhheeeeeeCCC
Confidence            788 89999999999997653     54       3332221  00000      00000111   1 122345568999


Q ss_pred             CEEEEEEEec--CCee-eEEEeeehhhhccCceEEEEE
Q 020366          265 SWTVILVSLD--NQGM-WNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       265 g~~virf~ad--npG~-W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      +...+.|.++  .||. +-|.|-+--|+. ||-..+.|
T Consensus        91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V  127 (128)
T 1nwp_A           91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL  127 (128)
T ss_dssp             CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred             CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence            9999999998  7876 999999877877 78887776

>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...

Probab=93.65  E-value=0.54  Score=36.36  Aligned_cols=91  Identities=9%  Similarity=0.089  Sum_probs=57.1

Q ss_pred             EEecC-CcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCc---c--cc-ccCCC----CCCCceeeEEeCCCCEEEE
Q 020366          201 MQVNL-HEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAA---E--KR-RTYNL----ADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~~~-g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~---~--~~-~~~n~----~~p~~rDTv~vp~~g~~vi  269 (327)
                      +.++. |+.|+++|.|.+..+  ---=||.| ||+.. +....   +  .. ..-++    +....-.|.+|.+|+...|
T Consensus        20 i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~-~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v   95 (125)
T 3fsa_A           20 ITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTA-ADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV   95 (125)
T ss_dssp             EEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEH-HHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred             EEEecCCCEEEEEEEECCccc--ccccCceE-EEccc-chHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence            78876 999999999997542  11113444 44432 11100   0  00 00111    1234456778999999999


Q ss_pred             EEEec---CCeeeEEEeeehhhhccCceEEEEE
Q 020366          270 LVSLD---NQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       270 rf~ad---npG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      -|.+.   .||.+-|-|-  -|+  ||-..+.|
T Consensus        96 tf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V  124 (125)
T 3fsa_A           96 TFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL  124 (125)
T ss_dssp             EEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred             EEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence            99987   8999999999  588  89888876

>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}

Probab=89.25  E-value=0.25  Score=38.79  Aligned_cols=29  Identities=17%  Similarity=0.179  Sum_probs=23.5

Q ss_pred             eeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366           37 YDSLDVHVGQSVSVLVTLNQPPKDYYIVAS   66 (327)
Q Consensus        37 v~~l~l~~GqRydvlv~~~~~~~~y~ir~~   66 (327)
                      .+...|.+||++++.+++++ +|.|++...
T Consensus        96 ~~t~~l~pGet~~v~f~~~~-pG~y~f~C~  124 (139)
T 2aan_A           96 AESPLANGNETVEVTFTAPA-AGTYLYICT  124 (139)
T ss_dssp             EECCCBCTTCEEEEEEECCS-SEEEEEECC
T ss_pred             ccccccCCCCEEEEEEECCC-CeEEEEEcC
Confidence            45667899999999999874 688887765

>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A

Probab=86.88  E-value=2.1  Score=35.99  Aligned_cols=74  Identities=12%  Similarity=0.054  Sum_probs=51.9

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|++.|++.+- .       |.|+|-+.|                 ...|   +-||....+.|.++.||.
T Consensus        41 n~l~lP~g~~V~~~lTS~DV-i-------HSF~IP~lg-----------------vK~d---aiPGr~n~l~~~~~~pG~   92 (205)
T 1cyx_A           41 NEIAFPANTPVYFKVTSNSV-M-------HSFFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGT   92 (205)
T ss_dssp             SEEEEETTSCEEEEEEESSS-C-------EEEEEGGGT-----------------EEEE---ECTTCCEEEEECCSSSEE
T ss_pred             ceEEEeCCCEEEEEEecCCc-e-------eeEEecccC-----------------cEEE---ecCCceEEEEEEeCCCeE
Confidence            34789999999999998754 3       356663222                 1122   224556678899999999


Q ss_pred             eEEEeeehh-hhccCceEEEEEE
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v~  300 (327)
                      +...|--.- .-|..|-..+.+.
T Consensus        93 y~g~CsE~CG~~Hs~M~~~v~vv  115 (205)
T 1cyx_A           93 YDGICAEICGPGHSGMKFKAIAT  115 (205)
T ss_dssp             EEEEECSCCSTTSTTCCEEEEEE
T ss_pred             EEEEcccccccchhhceEEEEEE
Confidence            999998644 3366788888776

>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*

Probab=84.68  E-value=2.7  Score=37.42  Aligned_cols=77  Identities=9%  Similarity=0.132  Sum_probs=53.7

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.+|.|+.|++.+++.+ ..|       .|+|=+-|                 ...|   +-||....+.|.++.||.
T Consensus       189 N~lvlP~g~~V~~~ltS~D-ViH-------sf~iP~lg-----------------~k~d---aiPG~~n~~~~~~~~~G~  240 (298)
T 3hb3_B          189 NPVVVPVGKKVLVQVTATD-VIH-------AWTIPAFA-----------------VKQD---AVPGRIAQLWFSVDQEGV  240 (298)
T ss_dssp             SCEEEESSSEEEEEEEESS-SCE-------EEEEGGGT-----------------EEEE---ECTTCCEEEEEECSSSEE
T ss_pred             ceEEEEcCCEEEEEEEeCC-ccc-------eeeEcccC-----------------ceEE---ecCCceEEEEEEeCCCEE
Confidence            3478999999999999865 344       45552221                 1223   234555678899999999


Q ss_pred             eEEEeeehh-hhccCceEEEEEEcCc
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v~~~~  303 (327)
                      +...|.-.- .-|..|-..+++..++
T Consensus       241 y~g~CsE~CG~~Hs~M~~~v~vvs~~  266 (298)
T 3hb3_B          241 YFGQCSELCGINHAYMPIVVKAVSQE  266 (298)
T ss_dssp             EEECCCSCCSTTTTSCCEEEEEECHH
T ss_pred             EEEEcccccCcCccCCeeEEEEEcHH
Confidence            999999643 4477788888887553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d1aoza3	214	b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C	7e-40
d1aoza2	209	b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C	9e-24
d1v10a2	168	b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus	7e-21
d1gyca2	170	b.6.1.3 (A:131-300) Laccase {Trametes versicolor,	1e-20
d2q9oa2	181	b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce	2e-18
d1hfua2	172	b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr	5e-18
d2q9oa3	216	b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce	4e-11
d1kv7a2	165	b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc	7e-10
d1hfua3	200	b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr	1e-08
d1v10a3	190	b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus	3e-08
d1gyca3	199	b.6.1.3 (A:301-499) Laccase {Trametes versicolor,	4e-06
d1gska3	154	b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba	8e-04

>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  137 bits (345), Expect = 7e-40
 Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)

Query: 134 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSV----- 188
              R I L N+  +ING +++A+N +S     TP   A  +N+   F  N    V     
Sbjct: 4   KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63

Query: 189 -----PSGGASSVATSVMQVNLHEYIEVVFQ------NNEKTMQSWHLDGYDFWVVGYGS 237
                P+   + +   V Q  + E ++V+ Q       N      WHL G+DFWV+GYG 
Sbjct: 64  DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123

Query: 238 GQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYL 297
           G+++AE+  + NL +   R+T  ++P  WT I    DN G+W     I    ++G     
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183

Query: 298 KVWNAVHSLANEYDIPSNILVCGKA 322
                   +     IP+  L CG  
Sbjct: 184 AE-----GVEKVGRIPTKALACGGT 203

>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score = 94.5 bits (234), Expect = 9e-24
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             RI++     + NF I  H + +VE +G++        +D++ G+S SVL+T +Q P +
Sbjct: 86  RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE 145

Query: 61  YY-IVASTRFTK-NVLTATAILHYTNSHS--PASGPLPTGPTYEIHWSMKQARTFRWNLT 116
            Y +   TR    N      +L+Y  +      + P P  P ++      +++ F + +T
Sbjct: 146 NYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD---DFDRSKNFTYRIT 202

Query: 117 ANAARP 122
           A    P
Sbjct: 203 AAMGSP 208

>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

 Score = 85.9 bits (212), Expect = 7e-21
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
            FRI +     ++ F I GH M ++EV+G        DSL +  GQ  SV+V  NQ   +
Sbjct: 66  RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGN 125

Query: 61  YYIVASTRFTKNVL---TATAILHYTNSHSPASGPLPTGPTY 99
           Y+I A+    +N       +AI  Y    +  + P  +  + 
Sbjct: 126 YWIRANPSNGRNGFTGGINSAIFRYQG--AAVAEPTTSQNSG 165

>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

 Score = 85.2 bits (210), Expect = 1e-20
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
            FR+ ++    ++ F I GH + ++EV+G ++   + DS+ +   Q  S ++  NQ   +
Sbjct: 67  RFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGN 126

Query: 61  YYIVASTRFTKNVL---TATAILHYTNSHSPASGPLPTGPT 98
           Y+I A+  F          +AIL Y    +P + P  T  T
Sbjct: 127 YWIRANPNFGTVGFAGGINSAILRYQG--APVAEPTTTQTT 165

>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

 Score = 79.4 bits (195), Expect = 2e-18
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 7/104 (6%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             RI N      F   +  HTM ++  +         DSL + VGQ   V++  ++ P +
Sbjct: 64  RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDN 123

Query: 61  YYIVASTRFTKNV-----LTATAILHYTNSHSPASGPLPTGPTY 99
           Y+   +                AI HY    +P   P   G   
Sbjct: 124 YWFNVTFGGQAACGGSLNPHPAAIFHYAG--APGGLPTDEGTPP 165

>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

 Score = 78.2 bits (192), Expect = 5e-18
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 1   MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD 60
             R+ ++    ++ F I GH + ++EV+G  T  +  D L +  GQ  S ++  NQP  +
Sbjct: 65  RMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDN 124

Query: 61  YYIVASTRFTKNVL-------TATAILHYTNSHS--PASGPLP 94
           Y+I A     +N L         +AIL Y  + +  P +   P
Sbjct: 125 YWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANP 167

>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

 Score = 59.5 bits (143), Expect = 4e-11
 Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 20/155 (12%)

Query: 135 TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGAS 194
              T+ +A           + VNG               +  P I  + +  +      +
Sbjct: 12  PDNTLPVALDLT-GTPLFVWKVNGSDINVD---------WGKPIIDYILTGNTSYPVSDN 61

Query: 195 SVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRR-------- 246
            V    +    +  IE   +         HL G+DF V+G      AA ++R        
Sbjct: 62  IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVD 121

Query: 247 --TYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW 279
               N  +   R T  +    W ++    DN G W
Sbjct: 122 LARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 156

>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

 Score = 55.0 bits (132), Expect = 7e-10
 Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 1   MFRISNVGLSTSFNFR-IQGHTMKLVEVEGSHTIQNI-YDSLDVHVGQSVSVLVTLNQPP 58
             R+ N   + S NF       + ++  +G    + +    L V +G+   VLV +N   
Sbjct: 62  RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 121

Query: 59  KDYYIVASTRFTKNVLT----ATAILHYTNSHSPASGPLPT 95
               +          +        ++        ASG LP 
Sbjct: 122 PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD 162

>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 30/172 (17%), Positives = 50/172 (29%), Gaps = 24/172 (13%)

Query: 153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIE-V 211
           R+ +NG +Y +   P  L           +                SV ++  ++ +E V
Sbjct: 36  RFTINGTAYESPSVPTLLQIMSGAQSANDLLPA------------GSVYELPRNQVVELV 83

Query: 212 VFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV-YPQSWTVIL 270
           V          +HL G+ F VV             TYN  + + R    +        I 
Sbjct: 84  VPAGVLGGPHPFHLHGHAFSVVRSAGS-------STYNFVNPVKRDVVSLGVTGDEVTIR 136

Query: 271 VSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNIL-VCGK 321
              DN G W     I      G          + +  +  + P     +C  
Sbjct: 137 FVTDNPGPWFFHCHIEFHLMNGLAIVFAE--DMANTVDANNPPVEWAQLCEI 186

>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

 Score = 51.0 bits (121), Expect = 3e-08
 Identities = 24/165 (14%), Positives = 45/165 (27%), Gaps = 24/165 (14%)

Query: 136 TRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASS 195
              + L            + +NG  ++    P+ L     +     +             
Sbjct: 23  DINLNLRIG--RNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPG---------- 70

Query: 196 VATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLT 255
              +V+ +  ++ IE+           +HL G++F VV              YN  + + 
Sbjct: 71  --GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVRTPGSSV-------YNYVNPVR 119

Query: 256 RHTAQVYPQSWTV-ILVSLDNQGMWNMRSAIWERQYLGQQFYLKV 299
           R    +      V      DN G W +   I      G       
Sbjct: 120 RDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAE 164

>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 25/133 (18%), Positives = 35/133 (26%), Gaps = 25/133 (18%)

Query: 153 RYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVV 212
            + +N  S+     P+ L           +                SV  +  H  IE+ 
Sbjct: 36  NFFINNASFTPPTVPVLLQILSGAQTAQDLLPA------------GSVYPLPAHSTIEIT 83

Query: 213 FQNNEKTMQ---SWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVY---PQSW 266
                        +HL G+ F VV             TYN  D + R             
Sbjct: 84  LPATALAPGAPHPFHLHGHAFAVVRSAGS-------TTYNYNDPIFRDVVSTGTPAAGDN 136

Query: 267 TVILVSLDNQGMW 279
             I    DN G W
Sbjct: 137 VTIRFQTDNPGPW 149

>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

 Score = 37.3 bits (86), Expect = 8e-04
 Identities = 9/89 (10%), Positives = 18/89 (20%), Gaps = 11/89 (12%)

Query: 202 QVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW----------AAEKRRTYNLA 251
              +         N  +     HL    F V+                           +
Sbjct: 44  TPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPS 103

Query: 252 DTLTRHTAQVYPQSWTVILVSL-DNQGMW 279
           +   + T Q +      I  +     G +
Sbjct: 104 EKGWKDTIQAHAGEVLRIAATFGPYSGRY 132

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1aoza3	214	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	100.0
d1hfua3	200	Laccase {Inky cap fungus (Coprinus cinereus) [TaxI	100.0
d1v10a3	190	Laccase {Rigidoporus lignosus [TaxId: 219653]}	100.0
d1gyca3	199	Laccase {Trametes versicolor, laccase 2 [TaxId: 53	100.0
d2q9oa3	216	Laccase {Melanocarpus albomyces [TaxId: 204285]}	100.0
d1gska3	154	Spore coat protein A, CotA {Bacillus subtilis [Tax	100.0
d1kv7a3	181	multi-copper oxidase CueO {Escherichia coli [TaxId	99.96
d1hfua2	172	Laccase {Inky cap fungus (Coprinus cinereus) [TaxI	99.93
d1gyca2	170	Laccase {Trametes versicolor, laccase 2 [TaxId: 53	99.93
d2q9oa2	181	Laccase {Melanocarpus albomyces [TaxId: 204285]}	99.92
d1v10a2	168	Laccase {Rigidoporus lignosus [TaxId: 219653]}	99.92
d2j5wa5	149	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1aoza2	209	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	99.9
d1sddb2	139	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	99.9
d2j5wa2	145	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1kbva2	151	Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani	99.88
d1kcwa2	146	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1sdda2	116	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	99.86
d2bw4a2	173	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	99.75
d1gska2	174	Spore coat protein A, CotA {Bacillus subtilis [Tax	99.74
d1kv7a2	165	multi-copper oxidase CueO {Escherichia coli [TaxId	99.73
d1oe1a2	177	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	99.7
d1e30a_	153	Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920	99.57
d1aoza1	129	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	99.43
d1kbva1	151	Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani	99.37
d2bw4a1	157	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	99.34
d1oe2a1	159	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	99.31
d2q9oa1	162	Laccase {Melanocarpus albomyces [TaxId: 204285]}	99.3
d1mzya1	153	Nitrite reductase, NIR {Rhodobacter sphaeroides [T	99.29
d1qhqa_	139	Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]	99.17
d1ibya_	112	Red copper protein nitrosocyanin {Nitrosomonas eur	99.12
d1hfua1	131	Laccase {Inky cap fungus (Coprinus cinereus) [TaxI	99.11
d1gyca1	130	Laccase {Trametes versicolor, laccase 2 [TaxId: 53	99.05
d2j5wa1	192	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	99.03
d1kv7a1	140	multi-copper oxidase CueO {Escherichia coli [TaxId	98.99
d1v10a1	136	Laccase {Rigidoporus lignosus [TaxId: 219653]}	98.79
d1fwxa1	132	Nitrous oxide reductase, C-terminal domain {Paraco	98.68
d1sdda1	180	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	98.62
d2j5wa3	207	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	98.39
d1qnia1	131	Nitrous oxide reductase, C-terminal domain {Pseudo	98.25
d2j5wa4	179	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1v10a2	168	Laccase {Rigidoporus lignosus [TaxId: 219653]}	98.03
d1gska1	181	Spore coat protein A, CotA {Bacillus subtilis [Tax	98.01
d1aoza2	209	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	97.89
d1hfua2	172	Laccase {Inky cap fungus (Coprinus cinereus) [TaxI	97.88
d2q9oa2	181	Laccase {Melanocarpus albomyces [TaxId: 204285]}	97.88
d1kbva2	151	Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani	97.8
d1gyca2	170	Laccase {Trametes versicolor, laccase 2 [TaxId: 53	97.66
d1mzya2	178	Nitrite reductase, NIR {Rhodobacter sphaeroides [T	97.53
d2cuaa_	122	Cytochrome c oxidase {Thermus thermophilus, ba3 ty	97.47
d2q5ba1	105	Plastocyanin {Cyanobacterium (Phormidium laminosum	97.4
d1bxua_	91	Plastocyanin {Cyanobacterium (Synechocystis sp.),	97.23
d1pcsa_	98	Plastocyanin {Cyanobacterium (Synechocystis sp.),	97.09
d2plta_	98	Plastocyanin {Green alga (Chlamydomonas reinhardti	97.05
d1kv7a2	165	multi-copper oxidase CueO {Escherichia coli [TaxId	97.01
d1pmya_	123	Pseudoazurin {Methylobacterium extorquens, strain	96.84
d1cuoa_	129	Azurin {Methylomonas sp. j [TaxId: 32038]}	96.78
d1jzga_	128	Azurin {Pseudomonas aeruginosa [TaxId: 287]}	96.75
d2bw4a2	173	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	96.63
d1nwpa_	128	Azurin {Pseudomonas putida [TaxId: 303]}	96.59
d1paza_	120	Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta	96.46
d2ccwa1	129	Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d	96.45
d2j5wa5	149	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	96.35
d1oe1a2	177	Nitrite reductase, NIR {Alcaligenes xylosoxidans [	96.33
d1sddb2	139	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	96.29
d1adwa_	123	Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236	96.27
d1sddb1	67	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	96.18
d2j5wa2	145	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	96.15
d2jxma1	97	Plastocyanin {Photosynthetic prokaryote (Prochloro	96.13
d1gska2	174	Spore coat protein A, CotA {Bacillus subtilis [Tax	95.81
d1plca_	99	Plastocyanin {Poplar (Populus nigra), variant ital	95.79
d1kcwa2	146	Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}	95.73
d1kdja_	102	Plastocyanin {Fern (Adiantum capillus-veneris) [Ta	95.71
d2ov0a1	105	Amicyanin {Paracoccus denitrificans [TaxId: 266]}	95.56
d2cj3a1	105	Plastocyanin {Anabaena variabilis [TaxId: 1172]}	95.44
d1bqka_	124	Pseudoazurin {Achromobacter cycloclastes [TaxId: 2	95.44
d1kv7a3	181	multi-copper oxidase CueO {Escherichia coli [TaxId	95.19
d1bypa_	99	Plastocyanin {White campion (Silene pratensis) [Ta	95.18
d1iuza_	98	Plastocyanin {Ulva pertusa, a sea lettuce [TaxId:	94.83
d1cyxa_	158	Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56	93.39
d1gska3	154	Spore coat protein A, CotA {Bacillus subtilis [Tax	93.17
d1sdda2	116	Coagulation factor V {Cow (Bos taurus) [TaxId: 991	93.11
d1id2a_	106	Amicyanin {Paracoccus versutus (Thiobacillus versu	93.0
d1mzya2	178	Nitrite reductase, NIR {Rhodobacter sphaeroides [T	91.73
d1e30a_	153	Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920	89.52
d3dtub1	152	Cytochrome c oxidase {Rhodobacter sphaeroides [Tax	89.23
d1hfua3	200	Laccase {Inky cap fungus (Coprinus cinereus) [TaxI	88.6
d1aoza3	214	Ascorbate oxidase {Zucchini (Cucurbita pepo var. m	88.22
d1v54b1	137	Cytochrome c oxidase {Cow (Bos taurus) [TaxId: 991	86.64
d3ehbb1	145	Cytochrome c oxidase {Paracoccus denitrificans [Ta	85.63
d1v10a3	190	Laccase {Rigidoporus lignosus [TaxId: 219653]}	84.33

>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=8e-46  Score=320.16  Aligned_cols=184  Identities=30%  Similarity=0.566  Sum_probs=155.0

Q ss_pred             CceEEEEEeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCC---------C-CCCCCCCCcceeeEEEe
Q 020366          134 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSI---------Q-SVPSGGASSVATSVMQV  203 (327)
Q Consensus       134 ~~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~---------~-~~p~~~~~~~~~~~~~~  203 (327)
                      ..++++.+..++...+|..+|+|||++|..|++|+|.+.+++..+.++.+..         . ..+.+...|.|++++.+
T Consensus         4 ~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~   83 (214)
T d1aoza3           4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF   83 (214)
T ss_dssp             SCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred             CCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence            4678888876655667889999999999999999998776665555543321         0 11234567889999999


Q ss_pred             cCCcEEEEEEEeCCC------CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe
Q 020366          204 NLHEYIEVVFQNNEK------TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       204 ~~g~~v~ivi~N~~~------~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG  277 (327)
                      +.|++|||+|+|.+.      ..||||||||+||||++|.|.|+......+|+.+|.+|||+.|+++||++|||+|||||
T Consensus        84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG  163 (214)
T d1aoza3          84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG  163 (214)
T ss_dssp             CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred             cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence            999999999999753      46999999999999999999998877678899999999999999999999999999999


Q ss_pred             eeEEEeeehhhhccCceEEEEEEcCcccccccCCCCCchhhcccc
Q 020366          278 MWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKA  322 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~~C~~~  322 (327)
                      .|+||||+++|++.||+++|.+...  .   ..++|+++++||.+
T Consensus       164 ~w~~HCH~~~H~~~GM~~~~~v~~~--~---~~~~P~~~~~cg~~  203 (214)
T d1aoza3         164 VWAFHCHIEPHLHMGMGVVFAEGVE--K---VGRIPTKALACGGT  203 (214)
T ss_dssp             EEEEEESSHHHHHTTCEEEEEECGG--G---CCCCCHHHHSSHHH
T ss_pred             eEEEEECcHHHHhCcCcEEEEEccc--c---ccCCCccccccccc
Confidence            9999999999999999999987532  2   36799999999865

>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

Probab=100.00  E-value=1.5e-39  Score=278.40  Aligned_cols=168  Identities=19%  Similarity=0.223  Sum_probs=128.5

Q ss_pred             ceEEEEEeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE
Q 020366          135 TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ  214 (327)
Q Consensus       135 ~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~  214 (327)
                      +|.++.+...+  ..  .+|+|||++|.++..|+|.+...+...   .         ...+.+.+++.++.|++++|++.
T Consensus        22 aD~~~~~~~~~--~~--~~wtINg~s~~~~~~p~l~~~~~~~~~---~---------~~~~~~~~v~~~~~~~~~~~v~~   85 (200)
T d1hfua3          22 ADVNLRFQLGF--SG--GRFTINGTAYESPSVPTLLQIMSGAQS---A---------NDLLPAGSVYELPRNQVVELVVP   85 (200)
T ss_dssp             SSEEEECCEEE--ET--TEEEETTBCCCCCSSCHHHHHHTTCCS---G---------GGSSSTTSEEEECSSCEEEEEEE
T ss_pred             CcEEEEEeEee--cc--cEEEECCEeccCCCCChhhhhhcCCcC---c---------ccccccCceEEecCCcceEEEEe
Confidence            45555554321  12  379999999999899987654322111   0         01223457899999999999998


Q ss_pred             eCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCC-CCEEEEEEEecCCeeeEEEeeehhhhccC
Q 020366          215 NNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYP-QSWTVILVSLDNQGMWNMRSAIWERQYLG  292 (327)
Q Consensus       215 N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~-~g~~virf~adnpG~W~~HCHi~~h~~~G  292 (327)
                      |.. .+.||||||||+|+||+++.+.       .+|+.+|+||||+.|++ |+|++|||++||||.|+|||||++|++.|
T Consensus        86 ~~~~~~~Hp~HlHg~~F~vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~G  158 (200)
T d1hfua3          86 AGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNG  158 (200)
T ss_dssp             CCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTT
T ss_pred             eccccccCceeecCCcEEEEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCC
Confidence            876 4789999999999999997542       35788999999999975 56999999999999999999999999999


Q ss_pred             ceEEEEEEcCcccccccCCCCCch-hhccccCCCCC
Q 020366          293 QQFYLKVWNAVHSLANEYDIPSNI-LVCGKAVGHHP  327 (327)
Q Consensus       293 m~~~~~v~~~~~~~~~~~~~P~~~-~~C~~~~~~~~  327 (327)
                      ||++|.+..+ +. .+...+|+++ ++|++|...||
T Consensus       159 M~~~~~~~~~-~~-~~~~~~p~~~~~~C~~~~~~~~  192 (200)
T d1hfua3         159 LAIVFAEDMA-NT-VDANNPPVEWAQLCEIYDDLPP  192 (200)
T ss_dssp             CEEEEEECHH-HH-HHHCCCCHHHHHHHHHHHTCCH
T ss_pred             CcEEEEEcCC-Cc-ccccCCChhhhcccccccccCC
Confidence            9999976533 22 2346778776 48999988764

>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=100.00  E-value=3.1e-38  Score=269.01  Aligned_cols=165  Identities=16%  Similarity=0.189  Sum_probs=124.0

Q ss_pred             CceEEEEEeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEE
Q 020366          134 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVF  213 (327)
Q Consensus       134 ~~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi  213 (327)
                      .++.++.+...+  ..+..+|+|||++|.+++.|+|.+...+.....            ....+..++.+..+++++|++
T Consensus        21 ~~d~~~~~~~~~--~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~i~~   86 (190)
T d1v10a3          21 GADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSGVTNPN------------DLLPGGAVISLPANQVIEISI   86 (190)
T ss_dssp             CSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGG------------GSSSTTTEEEECTTCEEEEEE
T ss_pred             CCCEEEEEEEEe--cCCEeEEEECCEecCCCCCchHHHhhcCCcccc------------cccccceeEEccCccEEEEEe
Confidence            356666665432  233467999999999999998865542211100            011134568889999999888


Q ss_pred             EeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCC-EEEEEEEecCCeeeEEEeeehhhhccC
Q 020366          214 QNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQS-WTVILVSLDNQGMWNMRSAIWERQYLG  292 (327)
Q Consensus       214 ~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g-~~virf~adnpG~W~~HCHi~~h~~~G  292 (327)
                      .|.  ..||||||||+|+||+++.+.       .+++.+|+||||+.|+++| |++|||+|||||.|+|||||++|++.|
T Consensus        87 ~~~--~~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~~G  157 (190)
T d1v10a3          87 PGG--GNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAG  157 (190)
T ss_dssp             ECC--BSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTT
T ss_pred             ccC--ccccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhhCC
Confidence            774  789999999999999997432       3577889999999999876 788999999999999999999999999


Q ss_pred             ceEEEEEEcCcccccccCCCCCchh-hccccC
Q 020366          293 QQFYLKVWNAVHSLANEYDIPSNIL-VCGKAV  323 (327)
Q Consensus       293 m~~~~~v~~~~~~~~~~~~~P~~~~-~C~~~~  323 (327)
                      ||++|.+..+ + +.+..++|+.+. +|.+|.
T Consensus       158 M~~~~~~~~~-~-~~~~~~~~~~~~~~c~~~~  187 (190)
T d1v10a3         158 LAVVFAEDIP-N-IPIANAISPAWDDLCPKYN  187 (190)
T ss_dssp             CEEEEEESGG-G-HHHHSCCCHHHHTHHHHHT
T ss_pred             CcEEEEECCC-C-CCccCCCCHHHHhhhhhcc
Confidence            9999986543 2 223355666654 898875

>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

Probab=100.00  E-value=2.8e-38  Score=270.40  Aligned_cols=166  Identities=20%  Similarity=0.242  Sum_probs=126.6

Q ss_pred             CceEEEEEeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEE
Q 020366          134 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVF  213 (327)
Q Consensus       134 ~~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi  213 (327)
                      +.|.++.+..++   + ..+|+|||++|.+++.|+|.+...+...            ....+.+.+++.++.++++++++
T Consensus        21 ~~d~~~~l~~~~---~-~~~~~iNg~sf~~p~~p~l~~~~~~~~~------------~~~~~~~~~v~~~~~~~~~eiv~   84 (199)
T d1gyca3          21 GVDKALNLAFNF---N-GTNFFINNASFTPPTVPVLLQILSGAQT------------AQDLLPAGSVYPLPAHSTIEITL   84 (199)
T ss_dssp             CSSEEEECCEEE---C-SSCEEETTBCCCCCSSCHHHHHHTTCCS------------TTTSSSTTSEEEECTTCEEEEEE
T ss_pred             CccEEEEEEEec---c-cceEEECCEecCCCCcchHHHHhcCCCC------------cccccccCceEEeccCceeEEEe
Confidence            345665554322   1 2379999999999998887654321111            11234456788999999999999


Q ss_pred             EeCC---CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEe---CCCCEEEEEEEecCCeeeEEEeeehh
Q 020366          214 QNNE---KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQV---YPQSWTVILVSLDNQGMWNMRSAIWE  287 (327)
Q Consensus       214 ~N~~---~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v---p~~g~~virf~adnpG~W~~HCHi~~  287 (327)
                      .|..   ...||||||||+|+||+++.|.       .+|+.+|.+|||+.+   ++++|++|||+|||||.||||||+++
T Consensus        85 ~~~~~~~~~~HP~HlHG~~F~vv~~~~~~-------~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~  157 (199)
T d1gyca3          85 PATALAPGAPHPFHLHGHAFAVVRSAGST-------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDF  157 (199)
T ss_dssp             ECCTTSCSCSCEEEETTCCEEEEECTTCC-------CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHH
T ss_pred             ecccccCCCceeeeecCCcEEEEeecCCC-------ccCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchh
Confidence            8864   4679999999999999998553       357788999999887   79999999999999999999999999


Q ss_pred             hhccCceEEEEEEcCcccccccCCCCCchh-hccccCC
Q 020366          288 RQYLGQQFYLKVWNAVHSLANEYDIPSNIL-VCGKAVG  324 (327)
Q Consensus       288 h~~~Gm~~~~~v~~~~~~~~~~~~~P~~~~-~C~~~~~  324 (327)
                      |++.|||++|... +++ +.+..++|+++. .|++|-.
T Consensus       158 H~~~GM~~~~~~~-~~~-~~~~~~~p~~~~~~C~~~~~  193 (199)
T d1gyca3         158 HLEAGFAIVFAED-VAD-VKAANPVPKAWSDLCPIYDG  193 (199)
T ss_dssp             HHHTTCEEEEEET-HHH-HHHHCCCCHHHHHHHHHHHT
T ss_pred             hHhccCcEEEEEc-CCc-ccccCCCCHHHHhhhhhhcc
Confidence            9999999988543 222 334567888887 8988743

>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

Probab=100.00  E-value=1.1e-36  Score=263.61  Aligned_cols=157  Identities=19%  Similarity=0.232  Sum_probs=114.5

Q ss_pred             eEEEEEcCccCc-CCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCC-cEEEEEEEeC----CCCcCcee
Q 020366          151 KLRYAVNGISYV-NSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLH-EYIEVVFQNN----EKTMQSWH  224 (327)
Q Consensus       151 ~~~~~iN~~~~~-~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g-~~v~ivi~N~----~~~~HP~H  224 (327)
                      .++|+|||++|. .+..|+|...+.+...               .....+++.++.. ++..+++++.    ..+.||||
T Consensus        27 ~~~w~iNg~s~~~d~~~P~L~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~H   91 (216)
T d2q9oa3          27 LFVWKVNGSDINVDWGKPIIDYILTGNTS---------------YPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMH   91 (216)
T ss_dssp             SCEEEETTBCCCCCTTSCHHHHHHHTCCC---------------CCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEE
T ss_pred             EEEEEECCEecccCCCCCChhhhhcCCcc---------------cccccceeeccccccceeEEEEeccCCcccccccee
Confidence            368999999986 6788887654321100               0112344556554 4444555443    34689999


Q ss_pred             ecCCCeEEEEeccCCCCccc----------cccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeEEEeeehhhhccCce
Q 020366          225 LDGYDFWVVGYGSGQWAAEK----------RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQ  294 (327)
Q Consensus       225 LHG~~F~Vl~~g~G~~~~~~----------~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~  294 (327)
                      ||||+||||++|.|.+....          ...+|+.+|+||||+.|+++||++|||++||||.|+|||||++|+++|||
T Consensus        92 lHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~  171 (216)
T d2q9oa3          92 LHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLS  171 (216)
T ss_dssp             ESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCE
T ss_pred             ecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEccCCcccccCCe
Confidence            99999999999988765431          24678999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEcCcccccccC--CCCCch-hhccccCC
Q 020366          295 FYLKVWNAVHSLANEY--DIPSNI-LVCGKAVG  324 (327)
Q Consensus       295 ~~~~v~~~~~~~~~~~--~~P~~~-~~C~~~~~  324 (327)
                      ++| +.++.+ +++..  .+|+++ +.|.+|+.
T Consensus       172 ~~~-~~~p~~-~~~~~~~~~~~~~~~~C~~w~~  202 (216)
T d2q9oa3         172 VDF-LERPAD-LRQRISQEDEDDFNRVCDEWRA  202 (216)
T ss_dssp             EEE-EECHHH-HGGGCCHHHHHHHHHHHHHHHH
T ss_pred             EEE-EEcchh-hhhcccCCCchhhhccChhhcc
Confidence            998 445543 33322  346555 59988653

>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=2.6e-34  Score=235.94  Aligned_cols=132  Identities=14%  Similarity=0.030  Sum_probs=103.6

Q ss_pred             ceEEEEEeccccccCCeEEEEEcCccCcCCCCccccccccCCCCccccCCCCCCCCCCCCcceeeEEEecCCcEEEEEEE
Q 020366          135 TTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQ  214 (327)
Q Consensus       135 ~~~~~~~~~~~~~~~g~~~~~iN~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ivi~  214 (327)
                      ..|++.+...+ ...|...|+|||++|..|   ..                               ..++.|++++|.|.
T Consensus        12 ~~r~~~l~~~~-~~~g~~~~~ing~~~~~~---~~-------------------------------~~~~~G~~e~W~i~   56 (154)
T d1gska3          12 NIRTLKLAGTQ-DEYGRPVLLLNNKRWHDP---VT-------------------------------ETPKVGTTEIWSII   56 (154)
T ss_dssp             EEEEEEEEEEE-CTTSCEEEEETTBCTTSC---CC-------------------------------BCCBTTCEEEEEEE
T ss_pred             eEEEEEEcccc-cccCCceEEECCcCcCCC---cc-------------------------------cccCCCCEEEEEEE
Confidence            35566665433 234556799999998642   11                               13578999999999


Q ss_pred             eCCCCcCceeecCCCeEEEEeccCCCCcc----------ccccCCCCCCCceeeEEeCCCCEEEEEEE-ecCCeeeEEEe
Q 020366          215 NNEKTMQSWHLDGYDFWVVGYGSGQWAAE----------KRRTYNLADTLTRHTAQVYPQSWTVILVS-LDNQGMWNMRS  283 (327)
Q Consensus       215 N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~----------~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG~W~~HC  283 (327)
                      |.+.+.|||||||++||||+++.+.+...          ........++.||||+.|+++++++|||+ +||||.|+|||
T Consensus        57 N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HC  136 (154)
T d1gska3          57 NPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC  136 (154)
T ss_dssp             ECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred             eCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEec
Confidence            99999999999999999999975533211          01122345678999999999999999997 79999999999


Q ss_pred             eehhhhccCceEEEEEEc
Q 020366          284 AIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       284 Hi~~h~~~Gm~~~~~v~~  301 (327)
                      ||++|++.|||+.++|.|
T Consensus       137 Hil~Hed~GMM~~~~V~e  154 (154)
T d1gska3         137 HILEHEDYDMMRPMDITD  154 (154)
T ss_dssp             SCHHHHTTTCEEEEEEBC
T ss_pred             CcchHhhCcCceEEEEeC
Confidence            999999999999999864

>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.6e-29  Score=211.57  Aligned_cols=91  Identities=12%  Similarity=0.157  Sum_probs=77.5

Q ss_pred             EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCE-EEEEEEec--CC
Q 020366          201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSW-TVILVSLD--NQ  276 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~-~virf~ad--np  276 (327)
                      +.++.|++++|+|.|.+. ..|||||||++|+||+++.+..        ...++.|||||.|+++++ ++|+|.++  ++
T Consensus        87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~--------~~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~  158 (181)
T d1kv7a3          87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVKVEGNVSEVLVKFNHDAPKE  158 (181)
T ss_dssp             EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC--------CGGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred             eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCc--------cccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence            578999999999999875 6899999999999999975432        223578999999988765 57888765  56


Q ss_pred             eeeEEEeeehhhhccCceEEEEE
Q 020366          277 GMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       277 G~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |.|+||||+++|++.|||..|+|
T Consensus       159 G~w~fHCHil~H~d~GMm~~f~V  181 (181)
T d1kv7a3         159 HAYMAHCHLLEHEDTGMMLGFTV  181 (181)
T ss_dssp             GCEEEEESSHHHHHTTCEEEEEC
T ss_pred             CeEEEeCChHHHHhCCCCEEEEC
Confidence            99999999999999999999975

>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

Probab=99.93  E-value=7e-26  Score=188.12  Aligned_cols=86  Identities=28%  Similarity=0.502  Sum_probs=77.8

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC-------CC
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK-------NV   73 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~-------~~   73 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+|+|+++++|.|++||||||||+++++.++||||+......       ..
T Consensus        65 rlR~iN~~~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~  144 (172)
T d1hfua2          65 RMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFAN  144 (172)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGG
T ss_pred             EEEEeeecCCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCC
Confidence            89999999999999999999999999999999999999999999999999999999889999999865321       13


Q ss_pred             ceeEEEEEecCCC
Q 020366           74 LTATAILHYTNSH   86 (327)
Q Consensus        74 ~~~~ail~y~~~~   86 (327)
                      .+..|+|+|+++.
T Consensus       145 ~~~~aiL~Y~g~~  157 (172)
T d1hfua2         145 GVNSAILRYAGAA  157 (172)
T ss_dssp             GTTEEEEEETTSC
T ss_pred             ceEEEEEEECCCC
Confidence            4678999999764

>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

Probab=99.93  E-value=1.1e-25  Score=186.36  Aligned_cols=86  Identities=27%  Similarity=0.498  Sum_probs=78.0

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC---CceeE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~---~~~~~   77 (327)
                      ||||||+|+.+.+.|+||||+|+|||+||.+|+|+++++|.|++||||||||++++++++||||+.....+.   .....
T Consensus        67 rlRlIN~~~~~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~  146 (170)
T d1gyca2          67 RFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINS  146 (170)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred             EEEEeecCCCceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEeccccccccCCCeeE
Confidence            899999999999999999999999999999999999999999999999999999998899999998764332   34568


Q ss_pred             EEEEecCCC
Q 020366           78 AILHYTNSH   86 (327)
Q Consensus        78 ail~y~~~~   86 (327)
                      |||+|+++.
T Consensus       147 aiL~Y~~a~  155 (170)
T d1gyca2         147 AILRYQGAP  155 (170)
T ss_dssp             EEEEETTSC
T ss_pred             EEEEECCCC
Confidence            999998664

>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

Probab=99.92  E-value=3e-25  Score=185.54  Aligned_cols=86  Identities=23%  Similarity=0.340  Sum_probs=78.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEeccc-----CCCce
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFT-----KNVLT   75 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~-----~~~~~   75 (327)
                      ||||||+|+.+.++|+||||+|+|||+||.+++|+++++|.|++||||||||++++++|+||||+.....     ....+
T Consensus        64 rlR~iN~~~~~~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~  143 (181)
T d2q9oa2          64 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPH  143 (181)
T ss_dssp             EEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSC
T ss_pred             EEEEecccCCccEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCc
Confidence            8999999999999999999999999999999999999999999999999999999988999999986432     12457


Q ss_pred             eEEEEEecCCC
Q 020366           76 ATAILHYTNSH   86 (327)
Q Consensus        76 ~~ail~y~~~~   86 (327)
                      ..|||+|+++.
T Consensus       144 ~~ail~Y~ga~  154 (181)
T d2q9oa2         144 PAAIFHYAGAP  154 (181)
T ss_dssp             CEEEEEETTSC
T ss_pred             eEEEEEECCCC
Confidence            88999998764

>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=99.92  E-value=3.6e-25  Score=182.96  Aligned_cols=86  Identities=33%  Similarity=0.484  Sum_probs=78.1

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCC---CceeE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKN---VLTAT   77 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~---~~~~~   77 (327)
                      ||||||+|+.+.|.|+||||+|+|||+||.+|+|+.++.|.|++||||||||++++++++||||+.......   .....
T Consensus        66 rlRlina~~~~~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~  145 (168)
T d1v10a2          66 RFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINS  145 (168)
T ss_dssp             EEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTE
T ss_pred             EEEEEecccCceEEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCCcCCCCceE
Confidence            899999999999999999999999999999999999999999999999999999998899999998764432   24567


Q ss_pred             EEEEecCCC
Q 020366           78 AILHYTNSH   86 (327)
Q Consensus        78 ail~y~~~~   86 (327)
                      |||+|.|+.
T Consensus       146 aiL~Y~g~~  154 (168)
T d1v10a2         146 AIFRYQGAA  154 (168)
T ss_dssp             EEEEETTCC
T ss_pred             EEEEECCCC
Confidence            999998754

>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-25  Score=182.91  Aligned_cols=85  Identities=11%  Similarity=0.280  Sum_probs=76.7

Q ss_pred             EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+.  ..||||+||+.|.+...|                +.+|||+.|+||++++++|+||+||.
T Consensus        62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~~pG~  125 (149)
T d2j5wa5          62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGI  125 (149)
T ss_dssp             CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEE
T ss_pred             eEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCCCCee
Confidence            467889999999999754  579999999999985432                56899999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEEc
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      |+||||+++|++.||++.|.|.+
T Consensus       126 w~~HCHi~~H~~~GM~~~f~V~~  148 (149)
T d2j5wa5         126 WLLHCHVTDHIHAGMETTYTVLQ  148 (149)
T ss_dssp             EEEEECCHHHHHTTCEEEEEEEC
T ss_pred             EEEEcCCHHHHhccCceEEEEec
Confidence            99999999999999999999875

>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=99.90  E-value=7e-24  Score=182.43  Aligned_cols=87  Identities=28%  Similarity=0.456  Sum_probs=78.7

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCC-CceEEEEEeccc-CCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPP-KDYYIVASTRFT-KNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~-~~y~ir~~~~~~-~~~~~~~a   78 (327)
                      ||||||+|+.+.|+|+||||+|+|||+||.+|+|++++.|.|++||||||+|+++++. ++||||+..... .+...+.|
T Consensus        86 RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~a  165 (209)
T d1aoza2          86 RIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLT  165 (209)
T ss_dssp             EEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEE
T ss_pred             EEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCCCccceeE
Confidence            8999999999999999999999999999999999999999999999999999999854 579999987654 35567899


Q ss_pred             EEEecCCCC
Q 020366           79 ILHYTNSHS   87 (327)
Q Consensus        79 il~y~~~~~   87 (327)
                      +|+|.+...
T Consensus       166 il~y~~~~~  174 (209)
T d1aoza2         166 LLNYLPNSV  174 (209)
T ss_dssp             EEEETTSCT
T ss_pred             EEEeCCCCc
Confidence            999987653

>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=9.4e-24  Score=169.90  Aligned_cols=83  Identities=16%  Similarity=0.225  Sum_probs=74.3

Q ss_pred             EecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          202 QVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       202 ~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+..|++|+|.|.|.+.  ..||+|+||+.|.+.+.+                +.++||+.|+||++.+++|++||||.|
T Consensus        55 ~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~~pG~w  118 (139)
T d1sddb2          55 RMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWW  118 (139)
T ss_dssp             EEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEE
T ss_pred             ccccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecCCCEeE
Confidence            56779999999999753  569999999999885432                568999999999999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      +||||+++|.+.||++.+.|+
T Consensus       119 ~~HcH~~~H~~~GM~~~~~V~  139 (139)
T d1sddb2         119 LLDTEVGEIQRAGMQTPFLIV  139 (139)
T ss_dssp             EEECCCHHHHTTTCEEEEEEE
T ss_pred             EEEeCCHHHHhccCcEEEEEC
Confidence            999999999999999999874

>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.4e-23  Score=167.11  Aligned_cols=81  Identities=14%  Similarity=0.152  Sum_probs=73.2

Q ss_pred             EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+.  ..||||+||+.|++.                   ..++||+.|+|++..+++|+||+||.
T Consensus        61 l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~-------------------~~~~dt~~i~pg~~~t~~~~a~~pG~  121 (145)
T d2j5wa2          61 LTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWR-------------------GERRDTANLFPQTSLTLHMWPDTEGT  121 (145)
T ss_dssp             CEEETTCCEEEEEECCCSTTCCEEEEETTCCEEET-------------------TEEESEEEECTTCEEEEEECCCSCEE
T ss_pred             eEEEcCCeEEEEEEecCCCCcccceEecccEEEec-------------------ccCccceEECCCCEEEEEEEcCCCEe
Confidence            467899999999999653  569999999999872                   34689999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |+||||+++|++.||+..|.|.
T Consensus       122 w~~HCH~~~H~~~GM~~~~~V~  143 (145)
T d2j5wa2         122 FNVECLTTDHYTGGMKQKYTVN  143 (145)
T ss_dssp             EEEEECSHHHHHTTCEEEEEEE
T ss_pred             EEEEcCCHHHHhCCCeEEEEEe
Confidence            9999999999999999999985

>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Neisseria gonorrhoeae, AniA [TaxId: 485]

Probab=99.88  E-value=7.4e-23  Score=166.60  Aligned_cols=91  Identities=18%  Similarity=0.120  Sum_probs=77.3

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|++|+|.|.|.. ...||||+||++|+++....+.+           ...++||+.|++|++++++|+++|||.|
T Consensus        53 l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~-----------~~~~~~T~~v~pg~~~~~~f~a~~PG~y  121 (151)
T d1kbva2          53 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNY  121 (151)
T ss_dssp             EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred             eEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcC-----------CcccceeEecccCceeEEeeecCCCceE
Confidence            67899999999999954 56899999999999987653321           1246899999999999999999999999


Q ss_pred             EEEeeeh-hhhccCceEEEEEEcC
Q 020366          280 NMRSAIW-ERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~-~h~~~Gm~~~~~v~~~  302 (327)
                      +||||.+ +|++.||+.++.|..+
T Consensus       122 ~~h~H~l~~~~~~G~~g~~~V~~~  145 (151)
T d1kbva2         122 TLVDHSIFRAFNKGALGQLKVEGA  145 (151)
T ss_dssp             EEEESSTHHHHHSSCEEEEEEESC
T ss_pred             EEECCcHHHHHhccCeEEEEEcCC
Confidence            9999976 4578999999998644

>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-22  Score=163.76  Aligned_cols=82  Identities=11%  Similarity=0.192  Sum_probs=73.7

Q ss_pred             EEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+.  ..||+|+||+.|.+                   ++.++||+.|+|+++.+++|+++|||.
T Consensus        62 l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~~pG~  122 (146)
T d1kcwa2          62 LSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQNPGE  122 (146)
T ss_dssp             CEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEECSCEE
T ss_pred             ceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcCCCee
Confidence            467889999999999754  56999999998842                   266899999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEEEEEc
Q 020366          279 WNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      |+||||++.|.+.||++.++|.+
T Consensus       123 w~~HCH~~~H~~~GM~~~~~V~~  145 (146)
T d1kcwa2         123 WMLSCQNLNHLKAGLQAFFQVQE  145 (146)
T ss_dssp             EEEEECCHHHHHTCCEEEEEEEC
T ss_pred             EEEEcCCHHHHhcCCeEEEEEEe
Confidence            99999999999999999999853

>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.86  E-value=7.4e-24  Score=165.13  Aligned_cols=78  Identities=18%  Similarity=0.200  Sum_probs=55.6

Q ss_pred             EEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.|.|.+  ...||+|+||+.|++.                   +.++||+.|+|++..+++|++||||.
T Consensus        37 ~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~   97 (116)
T d1sdda2          37 ITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGR   97 (116)
T ss_dssp             CCCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CC
T ss_pred             eEEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeE
Confidence            35678999999999965  4679999999999871                   35789999999999999999999999


Q ss_pred             eEEEeeehhhhccCceEEE
Q 020366          279 WNMRSAIWERQYLGQQFYL  297 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~  297 (327)
                      |+||||+++|.+.||++.+
T Consensus        98 w~~HCH~~~H~~~GM~a~i  116 (116)
T d1sdda2          98 WTIASLIPRHFQAGMQAYI  116 (116)
T ss_dssp             CCCBCCSTTTGGGTCBCCC
T ss_pred             EEEEcCCHHHHHccceecC
Confidence            9999999999999998753

>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=99.75  E-value=2.3e-18  Score=140.95  Aligned_cols=89  Identities=17%  Similarity=0.060  Sum_probs=75.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCcee--eEEeCCCCEEEEEEEecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRH--TAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD--Tv~vp~~g~~virf~adnpG  277 (327)
                      .++++.||+|.|+. +.....|+|||||++|.++... |.+          .+++.++  |+.|++++.+++.|.+++||
T Consensus        67 ~l~akvGErV~i~~-~~~n~~s~fHliG~hFD~V~~~-G~~----------~~~p~~~~qTv~VppG~a~~ve~~f~~PG  134 (173)
T d2bw4a2          67 ALTAAVGERVLVVH-SQANRDTRPHLIGGHGDYVWAT-GKF----------RNPPDLDQETWLIPGGTAGAAFYTFRQPG  134 (173)
T ss_dssp             CEEEETTCEEEEEE-EESSSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESCCCBCTTEEEEEEEECCSCE
T ss_pred             CcccccCCeEEEEe-cCCCCCccceeccceeEEECCC-Ccc----------cCCCcCCceeEEccCCccEEEEEEecCce
Confidence            37889999997654 4446689999999999999875 532          3455555  99999999999999999999


Q ss_pred             eeEEEeee-hhhhccCceEEEEEE
Q 020366          278 MWNMRSAI-WERQYLGQQFYLKVW  300 (327)
Q Consensus       278 ~W~~HCHi-~~h~~~Gm~~~~~v~  300 (327)
                      .|+||||. .+|+..||+..++|.
T Consensus       135 ~y~~v~H~l~ea~~~G~~g~l~V~  158 (173)
T d2bw4a2         135 VYAYVNHNLIEAFELGAAGHFKVT  158 (173)
T ss_dssp             EEEEEESSHHHHHTTSCEEEEEEE
T ss_pred             EEEEEechHHHHHhCCCEEEEEEc
Confidence            99999996 578999999999996

>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.74  E-value=4.1e-18  Score=141.21  Aligned_cols=85  Identities=14%  Similarity=0.258  Sum_probs=68.0

Q ss_pred             CeeEEecCCCcEEEEEEe-CCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccC---CCce
Q 020366            1 MFRISNVGLSTSFNFRIQ-GHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTK---NVLT   75 (327)
Q Consensus         1 RlRliNa~~~~~~~~sid-gh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~---~~~~   75 (327)
                      ||||||+|+.+.+.|+|+ ||+|+|||+||+++ +|++++.|.|++||||||+|++++.+|.+++........   ....
T Consensus        69 RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~  148 (174)
T d1gska2          69 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPET  148 (174)
T ss_dssp             EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSCCCTTT
T ss_pred             EEEEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEccCCCCCccCCCC
Confidence            899999999999999995 78999999999998 699999999999999999999988666666555432211   1223


Q ss_pred             eEEEEEecCC
Q 020366           76 ATAILHYTNS   85 (327)
Q Consensus        76 ~~ail~y~~~   85 (327)
                      ...+++|...
T Consensus       149 ~~~vl~~~v~  158 (174)
T d1gska2         149 DANIMQFRVT  158 (174)
T ss_dssp             TTEEEEEECC
T ss_pred             CcceEEEEec
Confidence            4467777643

>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=3.3e-18  Score=140.59  Aligned_cols=64  Identities=22%  Similarity=0.316  Sum_probs=57.6

Q ss_pred             CeeEEecCCCcEEEEEE-eCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEE
Q 020366            1 MFRISNVGLSTSFNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVA   65 (327)
Q Consensus         1 RlRliNa~~~~~~~~si-dgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~   65 (327)
                      ||||||||+.+.|+|++ |||+|+|||+||+++ +|+++++|.|+|||||||+|++++.+ .+.++.
T Consensus        62 RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~-~~~~~~  127 (165)
T d1kv7a2          62 RLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK-PFDLVT  127 (165)
T ss_dssp             EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECTTC-CEEEEE
T ss_pred             EEEEEEcccCceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCCCC-cEEEEE
Confidence            89999999999999998 699999999999998 79999999999999999999998754 444444

>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=99.70  E-value=4e-17  Score=133.33  Aligned_cols=89  Identities=19%  Similarity=0.098  Sum_probs=76.8

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCcee--eEEeCCCCEEEEEEEecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRH--TAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD--Tv~vp~~g~~virf~adnpG  277 (327)
                      .++++.|++|+|+ .+.....++|||||.+|..+-.+ |.          +.|++.||  |+.|++++.+++.|.+++||
T Consensus        67 ~l~akvGe~Vri~-~~~~N~~ssfHlIG~hfD~V~~~-G~----------~~n~p~~~~qT~~V~pG~~~~v~~tf~~PG  134 (177)
T d1oe1a2          67 ALTAKVGETVLLI-HSQANRDTRPHLIGGHGDWVWET-GK----------FANPPQRDLETWFIRGGSAGAALYTFKQPG  134 (177)
T ss_dssp             CEEEETTCEEEEE-EEESSSCBCEEETTCCEEEEETT-CC----------TTSCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred             CcccccCCeEEEE-ecCCCCCccceecccccceEccC-Ce----------eCCCCCcCceeEEecCCccEEEEEEecCce
Confidence            3688999999885 45667899999999999988754 53          34677776  99999999999999999999


Q ss_pred             eeEEEeee-hhhhccCceEEEEEE
Q 020366          278 MWNMRSAI-WERQYLGQQFYLKVW  300 (327)
Q Consensus       278 ~W~~HCHi-~~h~~~Gm~~~~~v~  300 (327)
                      .|+||||. .+|+..||+..++|.
T Consensus       135 ~Y~fV~H~L~ea~~~Ga~g~l~V~  158 (177)
T d1oe1a2         135 VYAYLNHNLIEAFELGAAGHIKVE  158 (177)
T ss_dssp             EEEEEESSHHHHHTTSCEEEEEEE
T ss_pred             EEEEEecHHHHHHhcCCeEEEEec
Confidence            99999996 468999999999996

>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Rusticyanin
species: Thiobacillus ferrooxidans [TaxId: 920]

Probab=99.57  E-value=9.4e-16  Score=124.52  Aligned_cols=90  Identities=11%  Similarity=-0.024  Sum_probs=73.4

Q ss_pred             EEEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG  277 (327)
                      .+.++.|++|+|.|.|.+ .+.||||||++.+.+...+..          ....+...++..+.+++...++|. +++||
T Consensus        61 ti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~----------~~~~~~~~~~~~v~pg~~~~~~f~~~~~pG  130 (153)
T d1e30a_          61 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVPKDGKFGYTNFTWHPTAG  130 (153)
T ss_dssp             EEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCC----------CSEEEEBCCCCCCBTTEEEEEEEEECCCSE
T ss_pred             eEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccc----------cccCCCccceeeecCCCEEEEEEEeCCCCe
Confidence            478999999999999976 478999999987665444311          111245678888899999999997 68999


Q ss_pred             eeEEEeeehhhhccCceEEEEE
Q 020366          278 MWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       278 ~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|+||||+..|...||...|.|
T Consensus       131 ty~YhCh~~~H~~~GM~G~iiV  152 (153)
T d1e30a_         131 TYYYVCQIPGHAATGQFGKIVV  152 (153)
T ss_dssp             EEEEECCSTTTTTTTCEEEEEE
T ss_pred             EEEEeCCchhHHHCCCEEEEEE
Confidence            9999999999999999999987

>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=99.43  E-value=1.3e-13  Score=108.31  Aligned_cols=89  Identities=16%  Similarity=0.068  Sum_probs=66.1

Q ss_pred             EEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|++|+|.+.|... ..+-+|.||.++.  ....+            ......+...|+||+....+|.+++||.|
T Consensus        36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~--~~~~~------------~~~~~~~~~~I~PG~s~~y~f~a~~~Gt~  101 (129)
T d1aoza1          36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR--GTPWA------------DGTASISQCAINPGETFFYNFTVDNPGTF  101 (129)
T ss_dssp             EEEETTCEEEEEEEECCSSCCBCEEEETCCCT--TCGGG------------SCCBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred             EEEECCcEEEEEEEeCCCCCCeeeeeccceee--ccCcc------------ccccccccceECCCCEEEEEEECCCCCce
Confidence            678999999999999743 3566777776531  11100            00111233358899999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcCc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      +||||+..|...||..++.|..++
T Consensus       102 ~YH~H~~~h~~~Gm~G~~iV~~~~  125 (129)
T d1aoza1         102 FYHGHLGMQRSAGLYGSLIVDPPQ  125 (129)
T ss_dssp             EEEECSTTTGGGTCEEEEEEECCT
T ss_pred             EEecCCHHHHhCCCEEEEEEcCCC
Confidence            999999999999999999886554

>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Neisseria gonorrhoeae, AniA [TaxId: 485]

Probab=99.37  E-value=7.6e-13  Score=106.68  Aligned_cols=82  Identities=15%  Similarity=0.112  Sum_probs=58.8

Q ss_pred             EEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|+.|+|.+.|....  .|.+|+|+..     .+.|.              ...+  .|.||+....+|.+++||.
T Consensus        60 i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~-----~~~~~--------------~~~~--~i~PG~t~~y~f~a~~~Gt  118 (151)
T d1kbva1          60 IRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG--------------AAAT--FTAPGRTSTFSFKALQPGL  118 (151)
T ss_dssp             EEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG--------------TTTT--CBCTTEEEEEEEECCSCEE
T ss_pred             EEEECCCEEEEEEEcCCCCceeeeccccccc-----cCCCC--------------ccee--eeCCCCEEEEEEeCCCCeE
Confidence            6789999999999996443  3444444432     11110              0112  2678999999999999999


Q ss_pred             eEEEeee---hhhhccCceEEEEEEcCcc
Q 020366          279 WNMRSAI---WERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       279 W~~HCHi---~~h~~~Gm~~~~~v~~~~~  304 (327)
                      |+||||.   .+|..+||...+.| ++.+
T Consensus       119 ~~YH~H~~~~~~h~~~Gm~G~liV-~p~~  146 (151)
T d1kbva1         119 YIYHCAVAPVGMHIANGMYGLILV-EPKE  146 (151)
T ss_dssp             EEEECCCSSHHHHHHTTCEEEEEE-ECTT
T ss_pred             EEEECCCCChHHHHhCCCEEEEEE-ECCC
Confidence            9999995   45889999998887 4444

>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=99.34  E-value=4.1e-13  Score=108.85  Aligned_cols=85  Identities=18%  Similarity=0.182  Sum_probs=62.0

Q ss_pred             EEEecCCcEEEEEEEeCCC--CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNEK--TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~--~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG  277 (327)
                      +++++.|+.|+|.+.|...  ..|.+|+||..     .+.+.                ...-.|+||+..+.+|++++||
T Consensus        65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~-----~~~~~----------------~~~~~i~PGet~ty~f~a~~pG  123 (157)
T d2bw4a1          65 LMVVHENDYVELRLINPDTNTLLHNIDFHAAT-----GALGG----------------GALTQVNPGEETTLRFKATKPG  123 (157)
T ss_dssp             EEEEETTCEEEEEEEECTTCCSCBCCEETTSC-----SGGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred             eEEEECCcEEEEEEEeCCCCcceEeeeecccC-----CCcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence            3788999999999999643  34556666532     11110                0001278999999999999999


Q ss_pred             eeEEEee----ehhhhccCceEEEEEEcCcccc
Q 020366          278 MWNMRSA----IWERQYLGQQFYLKVWNAVHSL  306 (327)
Q Consensus       278 ~W~~HCH----i~~h~~~Gm~~~~~v~~~~~~~  306 (327)
                      .|+||||    +.+|...||...+.| ++.+.|
T Consensus       124 t~~YH~H~~~~~~~h~~~Gl~G~~iV-~p~e~l  155 (157)
T d2bw4a1         124 VFVYHCAPEGMVPWHVTSGMNGAIMV-LPRDGL  155 (157)
T ss_dssp             EEEEECCCTTCHHHHHHTTCEEEEEE-ECTBCE
T ss_pred             cceEEECCCCchHHHHhCCCEEEEEE-eCCCCC
Confidence            9999999    567889999999987 555544

>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=99.31  E-value=3.2e-12  Score=103.64  Aligned_cols=84  Identities=18%  Similarity=0.201  Sum_probs=63.8

Q ss_pred             EEecCCcEEEEEEEeCCCC--cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNEKT--MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~--~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|+.|+|.+.|....  .|.+|+||..+.+   + |.       ..   .       .|.||+....+|.++.||.
T Consensus        67 I~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~---~-g~-------~~---~-------~I~PG~t~ty~f~a~~~Gt  125 (159)
T d1oe2a1          67 LVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL---G-GA-------KL---T-------NVNPGEQATLRFKADRSGT  125 (159)
T ss_dssp             EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---G-GG-------GG---C-------CBCTTEEEEEEEECCSCEE
T ss_pred             EEEECCcEEEEEEECCCccccccceeeccccCCC---C-Cc-------cc---c-------cCCCCCeEEEEEEcCCCce
Confidence            6789999999999997643  5678888865211   1 10       00   0       2789999999999999999


Q ss_pred             eEEEee----ehhhhccCceEEEEEEcCcccc
Q 020366          279 WNMRSA----IWERQYLGQQFYLKVWNAVHSL  306 (327)
Q Consensus       279 W~~HCH----i~~h~~~Gm~~~~~v~~~~~~~  306 (327)
                      |+||||    +..|..+||...+.| +|.+.+
T Consensus       126 ~~yH~H~~~~~~~q~~~Gl~G~liV-~p~e~~  156 (159)
T d1oe2a1         126 FVYHCAPEGMVPWHVVSGMSGTLMV-LPRDGL  156 (159)
T ss_dssp             EEEECCCTTCHHHHHHTTCEEEEEE-ECTTCC
T ss_pred             EEEEeCCCCCchhHHhCCCEEEEEE-ECCCCC
Confidence            999999    556889999999887 454543

>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

Probab=99.30  E-value=1.7e-12  Score=105.79  Aligned_cols=89  Identities=13%  Similarity=-0.026  Sum_probs=69.6

Q ss_pred             EEecCCcEEEEEEEeCC-CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          201 MQVNLHEYIEVVFQNNE-KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~-~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      +.++.|+.|+|.+.|.. ...+.+|+||+++.......|             .+.......++++++...+|.++.+|.|
T Consensus        69 I~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g-------------~~~~~~~~i~~pg~~~~y~f~~~~~Gt~  135 (162)
T d2q9oa1          69 IVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDG-------------ANGVTECPIPPKGGQRTYRWRARQYGTS  135 (162)
T ss_dssp             EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC-------------CBTTTBCCBCTTTEEEEEEEECCSCEEE
T ss_pred             EEEECCcEEEEEEEecCcccccccccccccccCCCcCCC-------------CcccccceecCCCCEEEeeecCCCCEEE
Confidence            67899999999999975 467889999998643222111             1222233456889999999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEcC
Q 020366          280 NMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      +||||+..|...||..++.|..+
T Consensus       136 wYH~H~~~q~~~Gl~G~~iV~~p  158 (162)
T d2q9oa1         136 WYHSHFSAQYGNGVVGTIQINGP  158 (162)
T ss_dssp             EEEECSTTGGGGTCEEEEEEECC
T ss_pred             EeecCCHHHHhCCCEEEEEECCC
Confidence            99999999999999999998654

>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.29  E-value=3e-12  Score=103.24  Aligned_cols=80  Identities=15%  Similarity=0.072  Sum_probs=61.7

Q ss_pred             EEecCCcEEEEEEEeCC--CCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          201 MQVNLHEYIEVVFQNNE--KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~--~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.++.|++|+|.+.|..  ...|.+|+||....     .|                ....-.|+||+....+|++++||.
T Consensus        64 i~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~~-----~~----------------~~~~~~i~PG~t~ty~f~a~~~Gt  122 (153)
T d1mzya1          64 MIVHEGDYVELTLINPPENTMPHNIDFHAATGA-----LG----------------GGGLTLINPGEKVVLRFKATRAGA  122 (153)
T ss_dssp             EEEETTCEEEEEEEECTTCCSCBCCEETTSCSG-----GG----------------GGGGCCBCTTEEEEEEEECCSCEE
T ss_pred             EEEeCCCEEEEEEEcCCCCceEccCccccCCcC-----CC----------------CCccccccCCCEEEEEEEcCCCce
Confidence            68899999999999954  45688888886410     01                001113789999999999999999


Q ss_pred             eEEEeee-----hhhhccCceEEEEEEcC
Q 020366          279 WNMRSAI-----WERQYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi-----~~h~~~Gm~~~~~v~~~  302 (327)
                      |+||||.     ..|...||...+.| +|
T Consensus       123 ~~YH~H~~~~~~~~h~~~Gm~G~~iV-~P  150 (153)
T d1mzya1         123 FVYHCAPGGPMIPWHVVSGMAGCIMV-LP  150 (153)
T ss_dssp             EEEECCCSTTHHHHHHHTTCEEEEEE-EC
T ss_pred             EEEEeCCcccccHhHHhCCCEEEEEE-ec
Confidence            9999994     45788999988887 44

>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Auracyanin
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.17  E-value=2e-11  Score=96.85  Aligned_cols=98  Identities=9%  Similarity=-0.121  Sum_probs=67.5

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEE----ec---cCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVG----YG---SGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL  273 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~----~g---~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a  273 (327)
                      ++++.|++|+|+|.|.+...||.+++-..+....    ..   .|....  .....-..-...+|..+.+++...|+|++
T Consensus        34 i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~v~~~t~~~~pg~s~~i~f~~  111 (139)
T d1qhqa_          34 LSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL--FVPPPDTPNALAWTAMLNAGESGSVTFRT  111 (139)
T ss_dssp             EEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT--TCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred             EEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhc--cccCCCcccccccccccCCcceEEEEEec
Confidence            7899999999999999877665443222211000    00   010000  00001112346788899999999999999


Q ss_pred             cCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          274 DNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       274 dnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      +.||.|.||||+..|+.+||...+.|.
T Consensus       112 ~~~G~y~f~Ct~pgH~~~GM~G~i~V~  138 (139)
T d1qhqa_         112 PAPGTYLYICTFPGHYLAGMKGTLTVT  138 (139)
T ss_dssp             CSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred             CCCeEEEEEcCCcCcccccCeEEEEEc
Confidence            999999999999999999999999874

>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Nitrosocyanin
domain: Red copper protein nitrosocyanin
species: Nitrosomonas europaea [TaxId: 915]

Probab=99.12  E-value=1.1e-10  Score=88.81  Aligned_cols=74  Identities=14%  Similarity=0.225  Sum_probs=61.1

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .+.++.|+.|+|+|.|.+...|+||+|++...                           ..+.+|+...++|.++.||.|
T Consensus        39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~~---------------------------~~~~pG~t~~~~f~~~~~G~y   91 (112)
T d1ibya_          39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGVQ---------------------------EVIKAGETKTISFTADKAGAF   91 (112)
T ss_dssp             EEEEETTCEEEEEEEECSSSCEEEEEGGGTEE---------------------------EEECTTCEEEEEEECCSCEEE
T ss_pred             EEEEeCCCEEEEEEEeCCCCceeeeecccccc---------------------------cccCCcceEEEEEEeccceEE
Confidence            37899999999999999989999999986432                           235678888999999999999


Q ss_pred             EEEeeehhhhccCceEEEEEEc
Q 020366          280 NMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      .||||+..| .+||...+.|.|
T Consensus        92 ~y~C~~~~~-~~~M~G~i~V~e  112 (112)
T d1ibya_          92 TIWCQLHPK-NIHLPGTLNVVE  112 (112)
T ss_dssp             EEBCSSSCT-TTBCCEEEEEEC
T ss_pred             EEECcccCh-hhcCeEEEEEEC
Confidence            999998322 356988888864

>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

Probab=99.11  E-value=6e-11  Score=92.75  Aligned_cols=89  Identities=13%  Similarity=0.132  Sum_probs=65.9

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEE-ec
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVS-LD  274 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-ad  274 (327)
                      +.++.|+.|+|.+.|...     ..|.+|+||.++.    + ..+.+.         ....-...|+||+..+.+|. ++
T Consensus        36 I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~----~-~~~~dg---------v~g~~~~~I~PG~~~~y~~~~~~  101 (131)
T d1hfua1          36 IRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQR----G-TNWADG---------ADGVNQCPISPGHAFLYKFTPAG  101 (131)
T ss_dssp             EEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCT----T-CGGGSC---------CBTTTBCCBCTTCEEEEEECCTT
T ss_pred             EEEECCCEEEEEEEECCCCccccccceEEeCCcccC----C-CCCCCC---------CcccccceECCCCeEEEEEeCCC
Confidence            678999999999999653     4689999996531    1 111100         00011124789999999998 67


Q ss_pred             CCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          275 NQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .+|.|.||||...|..+||...+.|.+++
T Consensus       102 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~  130 (131)
T d1hfua1         102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDN  130 (131)
T ss_dssp             CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred             CcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence            89999999999999999999999987543

>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

Probab=99.05  E-value=2e-10  Score=89.70  Aligned_cols=88  Identities=10%  Similarity=0.048  Sum_probs=65.1

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-c
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-D  274 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-d  274 (327)
                      +.++.|+.|++.+.|...     ..|-+|+||...-  +.+.+  +          .+.......|+||++...+|.+ +
T Consensus        36 I~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~--~~~~~--d----------~~~~~s~~~i~PG~s~~Y~~~~~~  101 (130)
T d1gyca1          36 ITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQA--GTNWA--D----------GPAFVNQCPIASGHSFLYDFHVPD  101 (130)
T ss_dssp             EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCGGG--S----------CCBTTTBCCBCTTEEEEEEEECSS
T ss_pred             EEEECCeEEEEEEEecCCCcccCCceeEEecccccc--ccCCC--C----------CccccccCCCCCCCeEEEEEECCC
Confidence            688999999999999753     4567899886631  11100  0          0111112248899999999997 5


Q ss_pred             CCeeeEEEeeehhhhccCceEEEEEEcC
Q 020366          275 NQGMWNMRSAIWERQYLGQQFYLKVWNA  302 (327)
Q Consensus       275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~  302 (327)
                      .+|.|+||||...|...||...+.|.+|
T Consensus       102 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~p  129 (130)
T d1gyca1         102 QAGTFWYHSHLSTQYCDGLRGPFVVYDP  129 (130)
T ss_dssp             CCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred             CCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence            7999999999999999999999988765

>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.2e-10  Score=97.07  Aligned_cols=96  Identities=15%  Similarity=0.098  Sum_probs=72.1

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD----  274 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad----  274 (327)
                      +++.++.|++|+|+|.|.....|.||.||..+.....+....+        ........+..|+||+..+.+|.+.    
T Consensus        76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~d--------g~~~~~~~~~~v~PG~t~tY~~~~~~~~~  147 (192)
T d2j5wa1          76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPD--------NTTDFQRADDKVYPGEQYTYMLLATEEQS  147 (192)
T ss_dssp             CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCC--------CCCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred             CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCC--------CCCCCCcccCcccCCCEEEEEEEccCccc
Confidence            3588999999999999999999999999998765443321111        0112334445689999999999875    


Q ss_pred             ------CCeeeEEEeeeh--hhhccCceEEEEEEcC
Q 020366          275 ------NQGMWNMRSAIW--ERQYLGQQFYLKVWNA  302 (327)
Q Consensus       275 ------npG~W~~HCHi~--~h~~~Gm~~~~~v~~~  302 (327)
                            ++|.|+||||+.  .|..+||...+.|-.+
T Consensus       148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~  183 (192)
T d2j5wa1         148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKK  183 (192)
T ss_dssp             CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECT
T ss_pred             cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccC
Confidence                  467999999984  4778899999988654

>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

Probab=98.99  E-value=6.2e-10  Score=87.89  Aligned_cols=85  Identities=11%  Similarity=0.104  Sum_probs=66.2

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-ee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-GM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-G~  278 (327)
                      ++.++.|+.|++.+.|.....|.||+||.+.  -....|.             +.    ..+++|+....+|.+++| |.
T Consensus        47 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~-------------~~----~~i~pg~~~~y~~~~~~~aGt  107 (140)
T d1kv7a1          47 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDGG-------------PQ----GIIPPGGKRSVTLNVDQPAAT  107 (140)
T ss_dssp             EEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------TT----CCBCTTCEEEEEEECCSCSEE
T ss_pred             eEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCCC-------------cc----ceEccCCceeEEEEEecCCee
Confidence            4788999999999999999999999999863  1111120             10    127899999999999886 99


Q ss_pred             eEEEeee----hhhhccCceEEEEEEcCc
Q 020366          279 WNMRSAI----WERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi----~~h~~~Gm~~~~~v~~~~  303 (327)
                      +.||||.    ..|..+||..++.|.+++
T Consensus       108 ~wyH~H~~~~~~~~~~~Gl~G~liV~~~e  136 (140)
T d1kv7a1         108 CWFHPHQHGKTGRQVAMGLAGLVVIEDDE  136 (140)
T ss_dssp             EEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred             EEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence            9999996    346779999999986543

>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=98.79  E-value=6.3e-09  Score=81.49  Aligned_cols=90  Identities=12%  Similarity=0.105  Sum_probs=65.2

Q ss_pred             EEecCCcEEEEEEEeCCC-----CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-c
Q 020366          201 MQVNLHEYIEVVFQNNEK-----TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-D  274 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~-----~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-d  274 (327)
                      +.++.|+.|+|.+.|...     ..+.+|.||.+.-  +...+            +....-....|+||+...-+|.+ +
T Consensus        36 i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~--~~~~~------------dgv~~~t~~~I~PG~~~~Y~~~~~~  101 (136)
T d1v10a1          36 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA--GTTEM------------DGPAFVNQCPIIPNESFVYDFVVPG  101 (136)
T ss_dssp             EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT--TCGGG------------SCCBTTTBCCBCTTEEEEEEEECTT
T ss_pred             EEEECCcEEEEEEEeCCCCcccCcceeEEecccccc--ccccc------------CCCCccccceECCCCeEEEEEECCC
Confidence            688999999999999743     3566999995421  11100            00111112347899999999998 4


Q ss_pred             CCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          275 NQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       275 npG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      .+|.|.||||...+...||...+.|.++++
T Consensus       102 ~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d  131 (136)
T d1v10a1         102 QAGTYWYHSHLSTQYCDGLRGAFVVYDPND  131 (136)
T ss_dssp             CCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred             CccceEEecCchhHHhCCCEEEEEECCCcc
Confidence            699999999999999999999998876543

>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Nitrosocyanin
domain: Nitrous oxide reductase, C-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.68  E-value=8e-08  Score=74.69  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=59.2

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      ++++.|+.|.|.|.|.+...|.+|-|    .|-+.|                    -...+.||....++|++++||.|.
T Consensus        54 i~V~~Gd~V~~~ltN~d~~~~v~H~~----~i~~~~--------------------~~~~~~PG~~~~~~F~a~~~G~y~  109 (132)
T d1fwxa1          54 FTVKEGDEVTVIVTNLDEIDDLTHGF----TMGNYG--------------------VAMEIGPQMTSSVTFVAANPGVYW  109 (132)
T ss_dssp             EEEETTCEEEEEEEECCCSTTCCEEE----EETTTT--------------------EEEEECTTCEEEEEEECCSCEEEE
T ss_pred             EEEcCCCEEEEEEEcCCCCccceEee----chhhhc--------------------cccccCCCEEEEEEEeCCCCeEEE
Confidence            78999999999999998877776654    331111                    123567899999999999999999


Q ss_pred             EEeeehhhh-ccCceEEEEE
Q 020366          281 MRSAIWERQ-YLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~-~~Gm~~~~~v  299 (327)
                      ||||..-|. |.||...+.|
T Consensus       110 ~~C~~~cg~~H~~M~G~iiV  129 (132)
T d1fwxa1         110 YYCQWFCHALHMEMRGRMLV  129 (132)
T ss_dssp             EECCSCCSTTCTTCEEEEEE
T ss_pred             EECccccCcchhcCEEEEEE
Confidence            999986665 6899988876

>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.62  E-value=2.2e-08  Score=82.02  Aligned_cols=97  Identities=12%  Similarity=0.013  Sum_probs=68.0

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec----
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD----  274 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad----  274 (327)
                      ++++++.|+.|.|+|.|.....+.+|.||..+-....+....+...        +.-.-...|+||++.+.+|.++    
T Consensus        60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~~--------~~~~~~~~V~PGet~tY~w~v~~~~g  131 (180)
T d1sdda1          60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTL--------PMEKMDDAVAPGQEYTYEWIISEHSG  131 (180)
T ss_dssp             CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCC--------HHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred             CeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccCC--------CCCccccccCCCCEEEEEEEeCCccc
Confidence            4589999999999999998889999999987543222211001000        0000111388999999999985    


Q ss_pred             ------CCeeeEEEeeehh--hhccCceEEEEEEcCc
Q 020366          275 ------NQGMWNMRSAIWE--RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       275 ------npG~W~~HCHi~~--h~~~Gm~~~~~v~~~~  303 (327)
                            +.|.|+||||+..  +...||...+.|-.++
T Consensus       132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g  168 (180)
T d1sdda1         132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG  168 (180)
T ss_dssp             CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred             CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCC
Confidence                  3489999999844  6677999999886553

>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=2.1e-07  Score=77.68  Aligned_cols=101  Identities=15%  Similarity=0.070  Sum_probs=67.2

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe-
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG-  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG-  277 (327)
                      +++.++.|++|+|+|.|.....+.+|.||..+.--..  |.+-.... .. ...+...-.-.|+||+...-+|.+...+ 
T Consensus        86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~d--g~~~~~~~-~~-~~~~~~~~~~~V~PGet~tY~w~v~~~~g  161 (207)
T d2j5wa3          86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNE--GTYYSPNY-NP-QSRSVPPSASHVAPTETFTYEWTVPKEVG  161 (207)
T ss_dssp             CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGC--SBCCBCC---------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred             ceEEEECCCEEEEEEEECCCCCccccccccccCcccc--cccccCCC-Cc-ccCCcCcccceecCCCEEEEEEEecCCCC
Confidence            3589999999999999998889999999987643222  21100000 00 0001111223478999999999876543 


Q ss_pred             ---------eeEEEeeehh--hhccCceEEEEEEcCc
Q 020366          278 ---------MWNMRSAIWE--RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       278 ---------~W~~HCHi~~--h~~~Gm~~~~~v~~~~  303 (327)
                               .|+||||+..  |...||...+.|-.++
T Consensus       162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g  198 (207)
T d2j5wa3         162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG  198 (207)
T ss_dssp             CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTT
T ss_pred             CccCCCCceeEEEccCCChhHhhccCceEEEEEccCC
Confidence                     7999999844  4466999999886553

>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Nitrosocyanin
domain: Nitrous oxide reductase, C-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.25  E-value=3.6e-06  Score=64.91  Aligned_cols=73  Identities=10%  Similarity=0.081  Sum_probs=55.9

Q ss_pred             EEecCCcEEEEEEEeCCCC---cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe
Q 020366          201 MQVNLHEYIEVVFQNNEKT---MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~---~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG  277 (327)
                      ++++.|+.|.+.+.|....   .|.|++.+..+.                           ..+.||....+.|.+++||
T Consensus        53 i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~~~G  105 (131)
T d1qnia1          53 FKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAGKPG  105 (131)
T ss_dssp             EEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSSE
T ss_pred             EEecCCCEEEEEEEccCCCCcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcCCCE
Confidence            6899999999999997543   455555443321                           2356788889999999999


Q ss_pred             eeEEEeeehhhh-ccCceEEEEEE
Q 020366          278 MWNMRSAIWERQ-YLGQQFYLKVW  300 (327)
Q Consensus       278 ~W~~HCHi~~h~-~~Gm~~~~~v~  300 (327)
                      .|.+||+..-|. |.+|...+.|.
T Consensus       106 ~y~~~C~~~cg~~H~~M~g~i~Ve  129 (131)
T d1qnia1         106 VYWYYCNWFCHALHMEMVGRMLVE  129 (131)
T ss_dssp             EEEEECCSCCSTTGGGCEEEEEEE
T ss_pred             EEEEECccccCcchhcCeeEEEEE
Confidence            999999975554 67898888774

>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=2.1e-06  Score=69.48  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=61.0

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCe-
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG-  277 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG-  277 (327)
                      +++.++.|++|.|+|.|.....+.||.||...     ...           ...       .|+||+..+-+|.+...+ 
T Consensus        86 P~IraevGD~i~V~f~N~a~~p~SiH~HGv~~-----~~~-----------~~~-------~v~PGet~tY~w~v~~~~g  142 (179)
T d2j5wa4          86 PQLHADVGDKVKIIFKNMATRPYSIHAHGVQT-----ESS-----------TVT-------PTLPGETLTYVWKIPERSG  142 (179)
T ss_dssp             CCEEEETTEEEEEEEEECSSSCBCCEESSCBC-----SCS-----------CCC-------CBCTTCEEEEEEECCGGGS
T ss_pred             CeEEEECCCEEEEEEEeCCCCCEeEeeccccC-----CCC-----------CCC-------cccCCccEEEEEEecCccC
Confidence            35889999999999999988899999999852     100           011       267999999999875433 


Q ss_pred             ---------eeEEEeeehh--hhccCceEEEEEE
Q 020366          278 ---------MWNMRSAIWE--RQYLGQQFYLKVW  300 (327)
Q Consensus       278 ---------~W~~HCHi~~--h~~~Gm~~~~~v~  300 (327)
                               .|+||||+..  +...||...+.|-
T Consensus       143 p~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc  176 (179)
T d2j5wa4         143 AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC  176 (179)
T ss_dssp             CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEE
T ss_pred             CccCCCCceeEEEecCCCcHHHhhCCCeEEEEEE
Confidence                     7999999944  5678988888774

>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=98.03  E-value=7.2e-06  Score=65.95  Aligned_cols=76  Identities=14%  Similarity=0.213  Sum_probs=62.5

Q ss_pred             eEEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-C
Q 020366          199 SVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-Q  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-p  276 (327)
                      .++.++.|++++|.|+|.+. ..+.||++||+|.|++.+ |.          ...|...|++.|.+|+..-+.+.++. +
T Consensus        55 ~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via~D-G~----------~v~P~~~d~i~i~~GqR~dvlv~~~~~~  123 (168)
T d1v10a2          55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVD-GV----------SHQPLTVDSLTIFAGQRYSVVVEANQAV  123 (168)
T ss_dssp             CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred             eEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEEeC-Ce----------ecCceEEeEEEEccCceEEEEEECCCCC
Confidence            35789999999999999975 468999999999999997 42          22488899999999999999999974 6


Q ss_pred             eeeEEEeee
Q 020366          277 GMWNMRSAI  285 (327)
Q Consensus       277 G~W~~HCHi  285 (327)
                      |.+.++-..
T Consensus       124 ~~y~ira~~  132 (168)
T d1v10a2         124 GNYWIRANP  132 (168)
T ss_dssp             SEEEEEEEE
T ss_pred             CcEEEEEEe
Confidence            765555443

>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.01  E-value=4.9e-06  Score=67.88  Aligned_cols=93  Identities=13%  Similarity=0.003  Sum_probs=59.0

Q ss_pred             EEEecCCcEEEEEEEeCCCC----------------------cCceeecCCCeEEEEeccCCCCccccccCCCCCCCcee
Q 020366          200 VMQVNLHEYIEVVFQNNEKT----------------------MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRH  257 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~----------------------~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD  257 (327)
                      ++.++.|+.|+|.+.|.-..                      ...+|+||.+.-  ....|.-.          +....+
T Consensus        58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~~~----------~~~~~~  125 (181)
T d1gska1          58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPE----------AWFSKD  125 (181)
T ss_dssp             BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCCTT----------SCBCGG
T ss_pred             eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCCcc----------cccccC
Confidence            37889999999999996321                      234999997521  11112100          001111


Q ss_pred             eE-EeCCCCEEEEEEEecCC-eeeEEEeeeh----hhhccCceEEEEEEcCcc
Q 020366          258 TA-QVYPQSWTVILVSLDNQ-GMWNMRSAIW----ERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       258 Tv-~vp~~g~~virf~adnp-G~W~~HCHi~----~h~~~Gm~~~~~v~~~~~  304 (327)
                      .+ ..+.+.+...+|.++.+ |.|.||||..    .+...||..++.|.++.+
T Consensus       126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~  178 (181)
T d1gska1         126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE  178 (181)
T ss_dssp             GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred             cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence            11 23445666789988876 7888999973    466789999998876554

>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=97.89  E-value=1e-05  Score=67.37  Aligned_cols=77  Identities=9%  Similarity=0.188  Sum_probs=62.6

Q ss_pred             eeEEEecCCcEEEEEEEeCCCC-cCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecC-
Q 020366          198 TSVMQVNLHEYIEVVFQNNEKT-MQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDN-  275 (327)
Q Consensus       198 ~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn-  275 (327)
                      ..++.++.|++++|.|+|.+.. .+.||++||.|+|++.+ |.          ..+|...|.+.|.+|+..-|.+.++. 
T Consensus        74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~D-G~----------~v~P~~v~~l~i~pGqRydvlv~~~~~  142 (209)
T d1aoza2          74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD-GN----------YVQPFYTSDIDIYSGESYSVLITTDQN  142 (209)
T ss_dssp             CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEET-TE----------EEEEEEESCEEECTTCEEEEEEECCSC
T ss_pred             ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecC-CE----------EcccceeeeEEEccCcEEEEEEEecCC
Confidence            3468899999999999999864 69999999999999998 52          23488899999999999999999975 


Q ss_pred             Ce-eeEEEeee
Q 020366          276 QG-MWNMRSAI  285 (327)
Q Consensus       276 pG-~W~~HCHi  285 (327)
                      +| .|.++-..
T Consensus       143 ~~~~y~i~~~~  153 (209)
T d1aoza2         143 PSENYWVSVGT  153 (209)
T ss_dssp             TTCCEEEEEEE
T ss_pred             CCCceEEEEec
Confidence            44 34444443

>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

Probab=97.88  E-value=5.5e-05  Score=60.84  Aligned_cols=76  Identities=12%  Similarity=0.215  Sum_probs=62.2

Q ss_pred             eEEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC-
Q 020366          199 SVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ-  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp-  276 (327)
                      .++.++.|++++|.|+|.+. ..+-|+++||+|.|++.+ |.          ...|...|++.|.+|+..-+-+.++.+ 
T Consensus        54 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~via~D-G~----------~v~P~~~~~l~i~~gqR~dvlv~~~~~~  122 (172)
T d1hfua2          54 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVD-GE----------LTEPHTVDRLQIFTGQRYSFVLDANQPV  122 (172)
T ss_dssp             CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred             eEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEEEEeC-CE----------EcccEEeceEeccCCeEEEEEEEcCCCC
Confidence            45889999999999999874 578999999999999987 52          234888999999999999999999865 


Q ss_pred             eeeEEEeee
Q 020366          277 GMWNMRSAI  285 (327)
Q Consensus       277 G~W~~HCHi  285 (327)
                      |.+-+.+..
T Consensus       123 ~~Y~ira~~  131 (172)
T d1hfua2         123 DNYWIRAQP  131 (172)
T ss_dssp             SEEEEEEEE
T ss_pred             CcEEEEEEe
Confidence            654444443

>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Melanocarpus albomyces [TaxId: 204285]

Probab=97.88  E-value=8.4e-05  Score=60.20  Aligned_cols=77  Identities=5%  Similarity=-0.055  Sum_probs=62.1

Q ss_pred             EEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCe
Q 020366          200 VMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG  277 (327)
                      .+.++.|++++|.|+|.+. ..+.|+++||.|+|++.+ |.          ...|...|++.|.+|+..-|-+.++ ++|
T Consensus        54 ~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~via~D-G~----------~v~P~~~~~~~i~~GqRydvlv~a~~~~~  122 (181)
T d2q9oa2          54 NVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAAD-MV----------PVNAMTVDSLFLAVGQRYDVVIDASRAPD  122 (181)
T ss_dssp             EEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEET-TE----------EEEEEEESCEEECTTCEEEEEEECCSCSS
T ss_pred             EEEECCCCEEEEEEecccCCccEEEEECCceEEEEEeC-Ce----------EccceEeCEEEecCCcEEEEEEeCCCCCc
Confidence            4789999999999999875 456899999999999998 52          2247788999999999999999997 556


Q ss_pred             eeEEEeeehh
Q 020366          278 MWNMRSAIWE  287 (327)
Q Consensus       278 ~W~~HCHi~~  287 (327)
                      .+-+.-....
T Consensus       123 ~Y~ir~~~~~  132 (181)
T d2q9oa2         123 NYWFNVTFGG  132 (181)
T ss_dssp             EEEEEEECCG
T ss_pred             cEEEEEeccc
Confidence            5555555433

>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Neisseria gonorrhoeae, AniA [TaxId: 485]

Probab=97.80  E-value=1.6e-05  Score=62.74  Aligned_cols=85  Identities=24%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAIL   80 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~ail   80 (327)
                      ||+|+|++......|++=|+.+.++..||........+.+.|.+|+++.+.+++++ +|.||+...........-..++|
T Consensus        62 ri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~~~~~~T~~v~pg~~~~~~f~a~~-PG~y~~h~H~l~~~~~~G~~g~~  140 (151)
T d1kbva2          62 RMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQL  140 (151)
T ss_dssp             EEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEE
T ss_pred             EEEEEcCCccccccceeecceeeEEecCCCcCCcccceeEecccCceeEEeeecCC-CceEEEECCcHHHHHhccCeEEE
Confidence            68999998877888999999999999999987655679999999999999999997 69999988742210011356788


Q ss_pred             EecCCC
Q 020366           81 HYTNSH   86 (327)
Q Consensus        81 ~y~~~~   86 (327)
                      ...+..
T Consensus       141 ~V~~~~  146 (151)
T d1kbva2         141 KVEGAE  146 (151)
T ss_dssp             EEESCC
T ss_pred             EEcCCC
Confidence            877653

>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Trametes versicolor, laccase 2 [TaxId: 5325]

Probab=97.66  E-value=7e-05  Score=60.06  Aligned_cols=73  Identities=14%  Similarity=0.230  Sum_probs=60.8

Q ss_pred             eEEEecCCcEEEEEEEeCCC-CcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CC
Q 020366          199 SVMQVNLHEYIEVVFQNNEK-TMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQ  276 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~-~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-np  276 (327)
                      .++.++.|++++|.|+|.+. ..+-|+++||.|.|++.. |.          ...|...|++.|.+|+..-+.++++ .+
T Consensus        56 ~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~via~D-G~----------~v~P~~~d~l~i~~gqRydvlv~~~~~~  124 (170)
T d1gyca2          56 AVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVD-GI----------NSQPLLVDSIQIFAAQRYSFVLNANQTV  124 (170)
T ss_dssp             CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEET-TE----------EEEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred             eEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEEEEeC-Ce----------eccceEeeEEEecCCeEEEEEEeCCCCC
Confidence            45789999999999999874 578999999999999997 52          2247788999999999999999996 47


Q ss_pred             eeeEEE
Q 020366          277 GMWNMR  282 (327)
Q Consensus       277 G~W~~H  282 (327)
                      |.+.++
T Consensus       125 ~~y~ir  130 (170)
T d1gyca2         125 GNYWIR  130 (170)
T ss_dssp             SEEEEE
T ss_pred             CcEEEE
Confidence            754443

>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.53  E-value=0.00061  Score=53.91  Aligned_cols=89  Identities=12%  Similarity=0.017  Sum_probs=70.0

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCce--eeEEeCCCCEEEEEEEecCCe
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTR--HTAQVYPQSWTVILVSLDNQG  277 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~r--DTv~vp~~g~~virf~adnpG  277 (327)
                      .++.+.||+|. ++.......-.||+-|-+|--+=.. |.          +.|++.+  -|+.|++|+-.++.|...-||
T Consensus        71 aL~AkvGEtV~-~~~~gpN~~SsfHvIGg~~D~V~~~-G~----------~~n~p~~~~qT~~v~~G~a~~~~~tf~~PG  138 (178)
T d1mzya2          71 ALKAKVGDNVL-FVHSQPNRDSRPHLIGGHGDLVWET-GK----------FHNAPERDLETWFIRGGTAGAALYKFLQPG  138 (178)
T ss_dssp             CEEEETTCEEE-EEEEESSSCBCEEEETCCEEEEETT-CC----------TTSCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred             CcccccCCeEE-EecccCCCCCCcccccCccceEccC-Cc----------cCCCCCCCceEEEecCCceeEEEEEeCCCe
Confidence            46889999994 3444445677899999999644332 43          3456655  478899999999999999999


Q ss_pred             eeEEEeeehh-hhccCceEEEEEE
Q 020366          278 MWNMRSAIWE-RQYLGQQFYLKVW  300 (327)
Q Consensus       278 ~W~~HCHi~~-h~~~Gm~~~~~v~  300 (327)
                      .+.|--|.+. ....|....++|.
T Consensus       139 ~Y~~VdH~l~~A~~kGA~g~l~V~  162 (178)
T d1mzya2         139 VYAYVNHNLIEAVHKGATAHVLVE  162 (178)
T ss_dssp             EEEEEESSHHHHHTTCCEEEEEEE
T ss_pred             EEEEEccHHHHHHhCCCeEEEEeC
Confidence            9999999875 4689999999996

>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Cytochrome c oxidase
species: Thermus thermophilus, ba3 type [TaxId: 274]

Probab=97.47  E-value=0.00035  Score=52.62  Aligned_cols=73  Identities=11%  Similarity=0.181  Sum_probs=52.2

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|+.|.|.|.|.+ ..|.|.+-+...                        .   +.+.||....+.|.++.||.+.
T Consensus        49 l~vp~G~~V~~~lts~D-V~H~f~ip~~~v------------------------~---~d~~PG~~~~~~~~~~~~G~y~  100 (122)
T d2cuaa_          49 IEVPQGAEIVFKITSPD-VIHGFHVEGTNI------------------------N---VEVLPGEVSTVRYTFKRPGEYR  100 (122)
T ss_dssp             EEEETTSEEEEEEEBSS-SCEEEEETTSSC------------------------E---EEECBTBCEEEEEECCSCEEEE
T ss_pred             EEEeCCCEEEEEEEcCC-ccceeEecCCCe------------------------e---EEEecCceEEEEEEeccceeEE
Confidence            68999999999999986 346554322211                        1   2345677788999999999999


Q ss_pred             EEeeehh-hhccCceEEEEEEc
Q 020366          281 MRSAIWE-RQYLGQQFYLKVWN  301 (327)
Q Consensus       281 ~HCHi~~-h~~~Gm~~~~~v~~  301 (327)
                      +.|+..- --|.+|...+.|.|
T Consensus       101 ~~C~~~CG~~H~~M~g~i~V~e  122 (122)
T d2cuaa_         101 IICNQYCGLGHQNMFGTIVVKE  122 (122)
T ss_dssp             EECCSCCSTTSTTCEEEEEEEC
T ss_pred             EEehhccCCCcccCeEEEEEEC
Confidence            9999722 12457888887753

>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]

Probab=97.40  E-value=4.2e-05  Score=56.18  Aligned_cols=84  Identities=19%  Similarity=0.077  Sum_probs=57.3

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~  278 (327)
                      .++++.|++|+|+  |.+...|..++....+..     +..        ........++..+.+++...+.|.+ +.||.
T Consensus        20 ~l~v~~GdtV~f~--n~~~~~h~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~   84 (105)
T d2q5ba1          20 NVTVHPGDTVKWV--NNKLPPHNILFDDKQVPG-----ASK--------ELADKLSHSQLMFSPGESYEITFSSDFPAGT   84 (105)
T ss_dssp             EEEECTTEEEEEE--ECSSCCEEEEECGGGSGG-----GCH--------HHHHHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred             EEEECCCCEEEEE--ECCCCCceeEeecCcccc-----ccc--------ccCCccccccccccCCceEEEEEEeccCCce
Confidence            3789999999874  665566655444332110     000        0001234577778888888999975 68899


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      |.|+|..  |..+||...++|.
T Consensus        85 y~y~C~~--H~~~GM~G~I~Ve  104 (105)
T d2q5ba1          85 YTYYCAP--HRGAGMVGKITVE  104 (105)
T ss_dssp             EEEECST--TGGGTCEEEEEEC
T ss_pred             EEEEeCC--CCCCCCEEEEEEc
Confidence            9999987  9999999999873

>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]

Probab=97.23  E-value=0.0011  Score=47.13  Aligned_cols=72  Identities=14%  Similarity=0.179  Sum_probs=48.5

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      ..++++.|++|+|+  |.+...|-....+.         .              +..-+...+.+|..  .++..+.||.
T Consensus        19 ~~i~I~~GdtV~f~--n~d~~~h~~~~~~~---------~--------------~~~~~~~~~~~g~~--~~~tF~~~G~   71 (91)
T d1bxua_          19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGET--FEATFSEPGT   71 (91)
T ss_dssp             SEEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCE--EEEECCSCEE
T ss_pred             CEEEECCCCEEEEE--ECCcCCceEEeccc---------c--------------cccccccccCCCCC--EEEEeccCce
Confidence            34789999999875  76665553322111         1              11234455556664  4456699999


Q ss_pred             eEEEeeehhhhccCceEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      +.|+|..  |..+||-..++|
T Consensus        72 y~Y~C~~--H~~~gM~G~I~V   90 (91)
T d1bxua_          72 YTYYCEP--HRGAGMVGKIVV   90 (91)
T ss_dssp             EEEECTT--TGGGTCEEEEEE
T ss_pred             EEEEeCC--CCCCCCEEEEEE
Confidence            9999987  988999888876

>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]

Probab=97.09  E-value=0.00042  Score=50.04  Aligned_cols=79  Identities=14%  Similarity=0.098  Sum_probs=48.3

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      ..++++.|++|.|+  |.+...|-+..+..       +. ..+..        ....-+...+.++....  +.++.||.
T Consensus        19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~-------~~-~~~~~--------~~~~~~~~~~~~g~t~~--~tf~~~G~   78 (98)
T d1pcsa_          19 STVTIKAGEEVKWV--NNKLSPHNIVFDAD-------GV-PADTA--------AKLSHKGLLFAAGESFT--STFTEPGT   78 (98)
T ss_dssp             SEEEECTTCEEEEE--ECSSCCEEEEECCS-------SS-CHHHH--------HHHCEEEEECSTTCEEE--EECCSCEE
T ss_pred             CEEEECCCCEEEEe--ECCCCccceEEecc-------cc-CCCcc--------ccccccccccCCCcEEE--EeccCCce
Confidence            35789999999887  65555554332211       10 00000        00112334455565444  45589999


Q ss_pred             eEEEeeehhhhccCceEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      +.|||..  |..+||...++|
T Consensus        79 y~Y~C~~--H~~~gM~G~I~V   97 (98)
T d1pcsa_          79 YTYYCEP--HRGAGMVGKVVV   97 (98)
T ss_dssp             EEEECGG--GTTTTCEEEEEE
T ss_pred             EEEEecc--CCCCCCEEEEEE
Confidence            9999977  999999998887

>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=97.05  E-value=0.00043  Score=49.77  Aligned_cols=79  Identities=19%  Similarity=0.134  Sum_probs=49.7

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|.|+  |.+...|.++.+....       .  ..      ...+....+.....++..  +.+..+.||.+
T Consensus        19 ~i~v~~GdtV~f~--n~~~~~h~~~~~~~~~-------~--~~------~~~~~~~~~~~~~~~~~t--~~~tf~~~G~y   79 (98)
T d2plta_          19 TLTIKSGETVNFV--NNAGFPHNIVFDEDAI-------P--SG------VNADAISRDDYLNAPGET--YSVKLTAAGEY   79 (98)
T ss_dssp             EEEECTTCEEEEE--ECSSCCEEEEECGGGS-------C--TT------CCHHHHCEEEEECSTTCE--EEEECCSCEEE
T ss_pred             EEEECCCCEEEEE--ECCCCceeEEEecCCc-------c--cc------ccCCcccccccccCCCce--EEEEecCCceE
Confidence            4789999999875  6655666555443210       0  00      000012234444444443  55677999999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|+|..  |..+||-..+.|
T Consensus        80 ~y~C~~--H~~~GM~G~I~V   97 (98)
T d2plta_          80 GYYCEP--HQGAGMVGKIIV   97 (98)
T ss_dssp             EEECGG--GGGGTCEEEEEE
T ss_pred             EEEeCc--CCCCCCEEEEEE
Confidence            999986  999999988877

>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.0016  Score=51.63  Aligned_cols=72  Identities=11%  Similarity=0.130  Sum_probs=53.9

Q ss_pred             CcEEEEEEEeCCCCcC-ceee-cCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCC--eeeEE
Q 020366          206 HEYIEVVFQNNEKTMQ-SWHL-DGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQ--GMWNM  281 (327)
Q Consensus       206 g~~v~ivi~N~~~~~H-P~HL-HG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnp--G~W~~  281 (327)
                      |++++|.|.|.+...+ -+++ +||.|+|++...+.          +..|...|++.|.+|+.+.|-+.+...  +.|+-
T Consensus        58 ~~~~RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~----------~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~~~~  127 (165)
T d1kv7a2          58 RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL----------LPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVT  127 (165)
T ss_dssp             EEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESCEEECTTCEEEEEEEECTTCCEEEEE
T ss_pred             CcEEEEEEEEcccCceeeEEecCCCeEEEEEeCCcc----------ccCceEeCeEEECCCCEEEEEEECCCCCcEEEEE
Confidence            6789999999876543 4554 89999999998432          224778899999999999888877544  46776


Q ss_pred             Eeeehh
Q 020366          282 RSAIWE  287 (327)
Q Consensus       282 HCHi~~  287 (327)
                      .++-..
T Consensus       128 l~~~~~  133 (165)
T d1kv7a2         128 LPVSQM  133 (165)
T ss_dssp             CCCSST
T ss_pred             EecCCC
Confidence            666633

>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Pseudoazurin
species: Methylobacterium extorquens, strain am1 [TaxId: 408]

Probab=96.84  E-value=0.0012  Score=49.73  Aligned_cols=34  Identities=18%  Similarity=0.331  Sum_probs=29.7

Q ss_pred             EEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          269 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       269 irf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      ..+.++.||.|.|+|.+  |..+||...++|+++..
T Consensus        64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~~   97 (123)
T d1pmya_          64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKRD   97 (123)
T ss_dssp             EEEECCSCEEEEEECST--TTTTTCEEEEEESSCCT
T ss_pred             cccccCCCceEEEEecc--CCCCCCEEEEEECCCCC
Confidence            45667999999999988  99999999999987654

>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Azurin
species: Methylomonas sp. j [TaxId: 32038]

Probab=96.78  E-value=0.0037  Score=47.21  Aligned_cols=96  Identities=8%  Similarity=-0.029  Sum_probs=66.3

Q ss_pred             EEecCC-cEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc---------ccccCC-CCCCCceeeEEeCCCCEEEE
Q 020366          201 MQVNLH-EYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE---------KRRTYN-LADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~~~g-~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~---------~~~~~n-~~~p~~rDTv~vp~~g~~vi  269 (327)
                      +.++.| +.|.|+|.|.+.++|-+  =+|.+-+...+.  ....         ....+. -..-..--|.+|.||+...|
T Consensus        20 i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~i   95 (129)
T d1cuoa_          20 ISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV   95 (129)
T ss_dssp             EEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred             EEEeCCCEEEEEEEEeCCcCCcee--EEeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCccccceE
Confidence            788999 89999999999887764  345654443321  1000         000000 01112334778999999999


Q ss_pred             EEEe---cCCeeeEEEeeehhhhccCceEEEEEEc
Q 020366          270 LVSL---DNQGMWNMRSAIWERQYLGQQFYLKVWN  301 (327)
Q Consensus       270 rf~a---dnpG~W~~HCHi~~h~~~Gm~~~~~v~~  301 (327)
                      .|.+   ..||.+.|=|-+-.|+ .||-..+.|.+
T Consensus        96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~  129 (129)
T d1cuoa_          96 KFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE  129 (129)
T ss_dssp             EEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred             EEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence            9987   4699999999999998 89999998853

>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Azurin
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.75  E-value=0.0043  Score=46.78  Aligned_cols=94  Identities=5%  Similarity=-0.040  Sum_probs=65.5

Q ss_pred             EEe-cCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc--------cccc-C-CCCCCCceeeEEeCCCCEEEE
Q 020366          201 MQV-NLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE--------KRRT-Y-NLADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~--------~~~~-~-n~~~p~~rDTv~vp~~g~~vi  269 (327)
                      +++ +.|+.|+|+|.|.+.+.|-+=+|  ..-++..+  .....        .... + .-..-..--|.+|.||+...|
T Consensus        20 i~V~k~Ge~v~l~~~N~g~~pH~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~i   95 (128)
T d1jzga_          20 ITVDKSCKQFTVNLSHPGNLPKNVMGH--NWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV   95 (128)
T ss_dssp             EEECTTCSEEEEEEECCSSSCHHHHCB--CCEEEEGG--GHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred             EEEecCCCEEEEEEEeCCccchheeec--Ccccccch--hHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEEE
Confidence            788 58999999999999998886544  44444332  10000        0000 0 001122345778899999999


Q ss_pred             EEEe---cCCeeeEEEeeehhhhccCceEEEEE
Q 020366          270 LVSL---DNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       270 rf~a---dnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|.+   +.||.+.|=|-+-.|| .||-..+.|
T Consensus        96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V  127 (128)
T d1jzga_          96 TFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTL  127 (128)
T ss_dssp             EEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEE
T ss_pred             EEEeeccCCCceEEEEECCCCcc-cccEEEEEE
Confidence            9997   5899999999999999 899999887

>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=96.63  E-value=0.0016  Score=51.73  Aligned_cols=85  Identities=14%  Similarity=0.080  Sum_probs=68.6

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccce-ee-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-QN-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~-P~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~a   78 (327)
                      |.||+|++..+.-.|++=|+-+.++..+|.+.. |. .++.+.|.+|++..+.+++++ +|.|.+.......-...-..+
T Consensus        75 rV~i~~~~~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~~-PG~y~~v~H~l~ea~~~G~~g  153 (173)
T d2bw4a2          75 RVLVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAAG  153 (173)
T ss_dssp             EEEEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEE
T ss_pred             eEEEEecCCCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEecC-ceEEEEEechHHHHHhCCCEE
Confidence            689999999999999999999999999999975 43 478999999999999999986 688888877432211123678


Q ss_pred             EEEecCCC
Q 020366           79 ILHYTNSH   86 (327)
Q Consensus        79 il~y~~~~   86 (327)
                      +|.+.|..
T Consensus       154 ~l~V~G~~  161 (173)
T d2bw4a2         154 HFKVTGEW  161 (173)
T ss_dssp             EEEEESCC
T ss_pred             EEEEcCCC
Confidence            88888764

>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Azurin
species: Pseudomonas putida [TaxId: 303]

Probab=96.59  E-value=0.007  Score=45.57  Aligned_cols=94  Identities=4%  Similarity=-0.038  Sum_probs=67.3

Q ss_pred             EEec-CCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc--------ccccCC--CCCCCceeeEEeCCCCEEEE
Q 020366          201 MQVN-LHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE--------KRRTYN--LADTLTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~~-~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~--------~~~~~n--~~~p~~rDTv~vp~~g~~vi  269 (327)
                      +.++ .|+.|+|+|.|.+.++|-+=+|  .+-++..+.  +...        ....+-  ...+..--|.+|.||+...|
T Consensus        20 i~V~~~ge~v~i~~~N~g~~pH~~~~h--n~vi~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~i   95 (128)
T d1nwpa_          20 IAIDKSCKTFTVELTHSGSLPKNVMGH--NLVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV   95 (128)
T ss_dssp             EEECTTCSEEEEEEEECSSCCHHHHCB--CCEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred             EEEecCCcEEEEEEEeCCccccceeee--cccccccch--hHHHHHHHHhhhccccCCCCCchhheeecccccCCCceEE
Confidence            6784 6999999999999999987544  554554431  1100        000111  11234456778999999999


Q ss_pred             EEEe---cCCeeeEEEeeehhhhccCceEEEEE
Q 020366          270 LVSL---DNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       270 rf~a---dnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .|.+   +-||.+.|=|-+--|| .||-..+.|
T Consensus        96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V  127 (128)
T d1nwpa_          96 TFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTL  127 (128)
T ss_dssp             EEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEE
T ss_pred             EEEecccCCCceEEEEECCCCcc-cCceEEEEE
Confidence            9998   4799999999999999 899998876

>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Pseudoazurin
species: Alcaligenes faecalis, strain s-6 [TaxId: 511]

Probab=96.46  E-value=0.0055  Score=45.61  Aligned_cols=32  Identities=9%  Similarity=0.220  Sum_probs=27.8

Q ss_pred             EEEecCCeeeEEEeeehhhhccCceEEEEEEcCc
Q 020366          270 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV  303 (327)
Q Consensus       270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~  303 (327)
                      .+..+.||.|.|+|-.  |..+||...++|+++.
T Consensus        65 s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~   96 (120)
T d1paza_          65 VLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSP   96 (120)
T ss_dssp             EEECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred             EEEecCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence            4566999999999987  9999999999998653

>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Azurin
species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]

Probab=96.45  E-value=0.0079  Score=45.32  Aligned_cols=95  Identities=8%  Similarity=-0.036  Sum_probs=64.9

Q ss_pred             EEe-cCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCcc------ccccCCCCCC----CceeeEEeCCCCEEEE
Q 020366          201 MQV-NLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAE------KRRTYNLADT----LTRHTAQVYPQSWTVI  269 (327)
Q Consensus       201 ~~~-~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~------~~~~~n~~~p----~~rDTv~vp~~g~~vi  269 (327)
                      +.+ +.|+.|+|+|.|.+...|-+=  +|.|-+...+.  ....      ....-++..|    ..--|.+|.||+...|
T Consensus        20 i~V~k~G~~V~l~~~N~g~l~h~~m--~hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~i   95 (129)
T d2ccwa1          20 IVVDKSCKQFTMHLKHVGKMAKVAM--GHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSV   95 (129)
T ss_dssp             EEECTTCSEEEEEEEECSCCCHHHH--CBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred             EEEecCCCEEEEEEEcCCcCchhee--eccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCCCceEEE
Confidence            677 689999999999988776543  34555554431  1100      0000011111    1223667889999999


Q ss_pred             EEEe---cCCeeeEEEeeehhhhccCceEEEEEE
Q 020366          270 LVSL---DNQGMWNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       270 rf~a---dnpG~W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      -|.+   +.||.+.|=|=+-.|| .||-..++|.
T Consensus        96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~  128 (129)
T d2ccwa1          96 TFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG  128 (129)
T ss_dssp             EEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred             EEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence            9998   4899999999999998 8999999874

>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0028  Score=49.11  Aligned_cols=61  Identities=13%  Similarity=0.247  Sum_probs=49.6

Q ss_pred             CeeEEecCCC-cEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~-~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      |++|+|.+.. ....+.+.||.+.+.. ||    +...|.+.|.||+++++.++++. +|.|++....
T Consensus        71 ~~~l~n~g~~~~~h~~H~HG~~f~~~~-~g----~~~~dtv~i~pg~~~~~~~~a~~-pG~w~~HCHi  132 (149)
T d2j5wa5          71 NWYLMGMGNEIDLHTVHFHGHSFQYKH-RG----VYSSDVFDIFPGTYQTLEMFPRT-PGIWLLHCHV  132 (149)
T ss_dssp             EEEEEECCSTTCCEEEEESSCCEEETT-TT----CEEESEEEECTTCEEEEEECCCS-CEEEEEEECC
T ss_pred             EEEEEecCCCCCccceEEEeeEeeeec-cC----CCCcceEEECCCceEEEEEeCCC-CeeEEEEcCC
Confidence            6899999875 4788999999998643 33    34578999999999999999885 6888887764

>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Alcaligenes xylosoxidans [TaxId: 85698]

Probab=96.33  E-value=0.0029  Score=50.21  Aligned_cols=85  Identities=13%  Similarity=0.075  Sum_probs=69.3

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccce-ee-EeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-QN-IYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~-P~-~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~a   78 (327)
                      |.||++++..+.-.|++=|+-+..|.-+|.+.. |. .++.+.|.+|++.-+.+++++ +|.|.+...........-..|
T Consensus        75 ~Vri~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~~-PG~Y~fV~H~L~ea~~~Ga~g  153 (177)
T d1oe1a2          75 TVLLIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGAAG  153 (177)
T ss_dssp             EEEEEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEE
T ss_pred             eEEEEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEecC-ceEEEEEecHHHHHHhcCCeE
Confidence            579999999999999999999999999999875 44 478999999999999999986 699988887532211123678


Q ss_pred             EEEecCCC
Q 020366           79 ILHYTNSH   86 (327)
Q Consensus        79 il~y~~~~   86 (327)
                      +|...|..
T Consensus       154 ~l~V~G~~  161 (177)
T d1oe1a2         154 HIKVEGKW  161 (177)
T ss_dssp             EEEEESCC
T ss_pred             EEEecCCC
Confidence            89888764

>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.29  E-value=0.0025  Score=48.84  Aligned_cols=61  Identities=13%  Similarity=0.149  Sum_probs=48.8

Q ss_pred             CeeEEecCCC-cEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~-~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      ||||+|.|+. -...+.+-||.+.+...+     +...+.+.|.||+++++.+++++ +|.|++....
T Consensus        63 ~~~l~n~g~~~~~h~iH~HG~~f~~~~~~-----~~~~dt~~i~pg~~~t~~~~~~~-pG~w~~HcH~  124 (139)
T d1sddb2          63 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ-----QHQLGVWPLLPGSFKTLEMKASK-PGWWLLDTEV  124 (139)
T ss_dssp             EEEEEECCCTTCCEEEEETTCCEEECSSS-----CEEESSEEECTTEEEEEEEECCS-SEEEEEECCC
T ss_pred             EEEEEecCCCCCcccEEEcceEEEeccCC-----CCcCCeEEECCCCEEEEEEecCC-CEeEEEEeCC
Confidence            7999999874 468999999999764322     34578899999999999999885 6888887653

>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Pseudoazurin
species: Thiosphaera pantotropha [TaxId: 82367]

Probab=96.27  E-value=0.009  Score=44.54  Aligned_cols=34  Identities=12%  Similarity=0.230  Sum_probs=28.9

Q ss_pred             EEEecCCeeeEEEeeehhhhccCceEEEEEEcCccc
Q 020366          270 LVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHS  305 (327)
Q Consensus       270 rf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~~  305 (327)
                      .+..+.+|.|-|+|=+  |..+||...++|+++...
T Consensus        65 ~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~~~   98 (123)
T d1adwa_          65 TLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAPEN   98 (123)
T ss_dssp             EEEECSCEEEEEECGG--GGGGTCEEEEEESSSCTT
T ss_pred             EEeccCCCeEEEEEcc--CCCCCCEEEEEECCCCCC
Confidence            4556899999999987  999999999999876543

>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.18  E-value=0.0025  Score=42.35  Aligned_cols=43  Identities=14%  Similarity=0.061  Sum_probs=34.8

Q ss_pred             eCCCCEEEEEEEecCCe----------eeEEEeeehh--hhccCceEEEEEEcCc
Q 020366          261 VYPQSWTVILVSLDNQG----------MWNMRSAIWE--RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       261 vp~~g~~virf~adnpG----------~W~~HCHi~~--h~~~Gm~~~~~v~~~~  303 (327)
                      |.||++.+-+|.+...|          .|+||||+..  +...||...+.|-.++
T Consensus         3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g   57 (67)
T d1sddb1           3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG   57 (67)
T ss_dssp             BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred             CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence            67899999999986555          8999999954  6678999999886553

>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0049  Score=47.47  Aligned_cols=58  Identities=10%  Similarity=0.135  Sum_probs=46.8

Q ss_pred             CeeEEecCC-CcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGL-STSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~-~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      ||+|+|.++ .....+.+.||.+.+        .....+.+.|.||+++++.++++. +|.|++....
T Consensus        70 ~~~l~n~g~~~~~h~iH~hG~~f~~--------~~~~~dt~~i~pg~~~t~~~~a~~-pG~w~~HCH~  128 (145)
T d2j5wa2          70 VWYLFSAGNEADVHGIYFSGNTYLW--------RGERRDTANLFPQTSLTLHMWPDT-EGTFNVECLT  128 (145)
T ss_dssp             EEEEECCCSTTCCEEEEETTCCEEE--------TTEEESEEEECTTCEEEEEECCCS-CEEEEEEECS
T ss_pred             EEEEEecCCCCcccceEecccEEEe--------cccCccceEECCCCEEEEEEEcCC-CEeEEEEcCC
Confidence            688999876 445789999998865        234578999999999999999985 6888887754

>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]

Probab=96.13  E-value=0.0049  Score=43.87  Aligned_cols=30  Identities=17%  Similarity=0.176  Sum_probs=25.9

Q ss_pred             EEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          268 VILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       268 virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .+.+..+.||.+.|+|-.  |..+||-..++|
T Consensus        67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~V   96 (97)
T d2jxma1          67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITV   96 (97)
T ss_dssp             CEEEECCSCSEEEEECSS--TTTTTCEEEEEE
T ss_pred             EEEEecCCCeEEEEEEcc--CCCCCCEEEEEE
Confidence            456778999999999976  999999988877

>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.81  E-value=0.011  Score=46.97  Aligned_cols=66  Identities=18%  Similarity=0.260  Sum_probs=50.7

Q ss_pred             CcEEEEEEEeCCCC-cCceee-cCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEec-CCe-eeEE
Q 020366          206 HEYIEVVFQNNEKT-MQSWHL-DGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLD-NQG-MWNM  281 (327)
Q Consensus       206 g~~v~ivi~N~~~~-~HP~HL-HG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG-~W~~  281 (327)
                      +++++|.|.|.+.. .+-+++ +|+.|+|++...|.          +..|...|++.|.+|+.+.|-+.+. .+| .|.+
T Consensus        65 ~~~~RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~----------l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l  134 (174)
T d1gska2          65 PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGL----------LPRSVKLNSFSLAPAERYDIIIDFTAYEGESIIL  134 (174)
T ss_dssp             SSEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECGGGTTCEEEE
T ss_pred             CceEEEEEEecccCceeeEeecCCCcEEEEEECCCc----------ccCceEeCEEEEcCCcEEEEEEECCCCCCceEEE
Confidence            56799999999764 567888 79999999998442          2247778999999999998888774 344 4444

>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Poplar (Populus nigra), variant italica [TaxId: 3691]

Probab=95.79  E-value=0.0062  Score=43.60  Aligned_cols=81  Identities=17%  Similarity=0.103  Sum_probs=47.8

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMW  279 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W  279 (327)
                      .++++.|++|+|+  |.+...|-+......+-     .|. ... ..      ....+.....++....+  ..+.||.+
T Consensus        18 ~iti~~GdtV~f~--n~~~~~Hnv~~~~~~~~-----~~~-~~~-~~------~~~~~~~~~~~g~t~~~--tF~~~G~y   80 (99)
T d1plca_          18 EFSISPGEKIVFK--NNAGFPHNIVFDEDSIP-----SGV-DAS-KI------SMSEEDLLNAKGETFEV--ALSNKGEY   80 (99)
T ss_dssp             EEEECTTCEEEEE--ECSSCCBCCEECTTSSC-----TTC-CHH-HH------CCCTTCCBCSTTCEEEE--ECCSCEEE
T ss_pred             EEEECCCCEEEEE--ECCCCCccEEEccCcCC-----Ccc-ccc-cC------cccccccccCCCceEEE--ecCCCceE
Confidence            4789999999884  76666777543222110     010 000 00      01111222345555444  45799999


Q ss_pred             EEEeeehhhhccCceEEEEE
Q 020366          280 NMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       280 ~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      -|+|-.  |..+||-..++|
T Consensus        81 ~Y~C~p--H~~~GM~G~I~V   98 (99)
T d1plca_          81 SFYCSP--HQGAGMVGKVTV   98 (99)
T ss_dssp             EEECGG--GTTTTCEEEEEE
T ss_pred             EEEeCC--CcCCCcEEEEEE
Confidence            999954  999999998876

>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ceruloplasmin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.0073  Score=46.37  Aligned_cols=58  Identities=7%  Similarity=0.199  Sum_probs=47.4

Q ss_pred             CeeEEecCC-CcEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGL-STSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~-~~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      |+||+|.|. .....+.+.||.+.        ..+...+.+.|.||+++.+.+++++ +|.|++....
T Consensus        71 ~~~l~n~g~~~~~h~~H~hg~~~~--------~~~~~~dt~~i~pg~~~~v~f~~~~-pG~w~~HCH~  129 (146)
T d1kcwa2          71 KWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN-PGEWMLSCQN  129 (146)
T ss_dssp             EEEEECCCSTTCCEEEEETTSCCC--------CSSSCCSEEEECTTCEEEEEEEECS-CEEEEEEECC
T ss_pred             EEEEEEcCCCCcccceEeeeeeee--------ccCCCcceEEecCCCEEEEEEEcCC-CeeEEEEcCC
Confidence            689999887 45678888888774        3566788999999999999999986 6888887764

>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Fern (Adiantum capillus-veneris) [TaxId: 13818]

Probab=95.71  E-value=0.0023  Score=46.02  Aligned_cols=30  Identities=10%  Similarity=0.108  Sum_probs=25.3

Q ss_pred             EEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          268 VILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       268 virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      ...+.++.||.|.|+|..  |..+||-..++|
T Consensus        72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~V  101 (102)
T d1kdja_          72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTV  101 (102)
T ss_dssp             EEEECCCSCEEEEEECST--TGGGTCEEEEEE
T ss_pred             EEEEeeCCCceEEEEecC--CcccCCeEEEEE
Confidence            344566899999999987  999999998887

>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Amicyanin
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.56  E-value=0.034  Score=39.98  Aligned_cols=70  Identities=10%  Similarity=0.094  Sum_probs=44.2

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|++|.|  .|.+...|.++...          +.+..           ...+.-.+.+++.  .++.++.||.+.
T Consensus        35 i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~~~-----------~~~~~~~~~~g~~--~~~tf~~pG~y~   89 (105)
T d2ov0a1          35 LHVKVGDTVTW--INREAMPHNVHFVA----------GVLGE-----------AALKGPMMKKEQA--YSLTFTEAGTYD   89 (105)
T ss_dssp             EEECTTCEEEE--EECSSSCBCCEECT----------TTSSS-----------SCEECCCBCTTEE--EEEEECSCEEEE
T ss_pred             EEECCCCEEEE--EECCCCceeEEEec----------ccCCc-----------ccccccccCCCce--EEEEecCCeEEE
Confidence            67899999987  47777788654322          11100           0112222334443  455668999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |+|-+  |  .||...+.|
T Consensus        90 y~C~~--H--~~M~G~I~V  104 (105)
T d2ov0a1          90 YHCTP--H--PFMRGKVVV  104 (105)
T ss_dssp             EECSS--C--TTCEEEEEE
T ss_pred             EEecC--C--CCCEEEEEE
Confidence            99987  5  588888776

>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Anabaena variabilis [TaxId: 1172]

Probab=95.44  E-value=0.0067  Score=43.68  Aligned_cols=84  Identities=14%  Similarity=0.122  Sum_probs=52.7

Q ss_pred             EEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEe-cCCee
Q 020366          200 VMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSL-DNQGM  278 (327)
Q Consensus       200 ~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a-dnpG~  278 (327)
                      .++++.|++|+|+  |.+...|-....       ..+...  ...    ........+.....+++...+.|.+ +.||.
T Consensus        20 ~i~v~~GdtV~f~--n~~~~~h~~~~~-------~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~   84 (105)
T d2cj3a1          20 KLTIKPGDTVEFL--NNKVPPHNVVFD-------AALNPA--KSA----DLAKSLSHKQLLMSPGQSTSTTFPADAPAGE   84 (105)
T ss_dssp             EEEECTTCEEEEE--ECSSCCEEEEEC-------SSSSTT--CCH----HHHHHHCEEEEECSTTCEEEEECCTTCCSEE
T ss_pred             EEEECCCCEEEEE--ECCCCceeeEec-------cCCCCc--ccc----ccCCcccccccccCCCcceEEEEEeccCCce
Confidence            4789999999885  544443322221       111100  000    0001123466667777888888876 68999


Q ss_pred             eEEEeeehhhhccCceEEEEEE
Q 020366          279 WNMRSAIWERQYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h~~~Gm~~~~~v~  300 (327)
                      +.|+|-.  |..+||-..++|.
T Consensus        85 y~y~C~~--H~~~GM~G~I~V~  104 (105)
T d2cj3a1          85 YTFYCEP--HRGAGMVGKITVA  104 (105)
T ss_dssp             EEEECTT--TGGGTCEEEEEEC
T ss_pred             EEEEeCC--CcCCCcEEEEEEe
Confidence            9999976  9999999998873

>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Pseudoazurin
species: Achromobacter cycloclastes [TaxId: 223]

Probab=95.44  E-value=0.0057  Score=45.80  Aligned_cols=34  Identities=15%  Similarity=0.187  Sum_probs=28.8

Q ss_pred             EEEEecCCeeeEEEeeehhhhccCceEEEEEEcCcc
Q 020366          269 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVH  304 (327)
Q Consensus       269 irf~adnpG~W~~HCHi~~h~~~Gm~~~~~v~~~~~  304 (327)
                      +.+.++.||.+-|+|..  |..+||...++|+++..
T Consensus        64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~~~   97 (124)
T d1bqka_          64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDAPA   97 (124)
T ss_dssp             EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSCT
T ss_pred             EEEecCCCceEEEEecc--CcCCCCEEEEEECCCCC
Confidence            34667999999999987  99999999999986543

>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: multi-copper oxidase CueO
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.018  Score=45.85  Aligned_cols=64  Identities=25%  Similarity=0.387  Sum_probs=47.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCcccee---eEeeEEEEcCCceEEEEEEeCC--C-CCceEEEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQ---NIYDSLDVHVGQSVSVLVTLNQ--P-PKDYYIVA   65 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~P---~~v~~l~l~~GqRydvlv~~~~--~-~~~y~ir~   65 (327)
                      ||||+|.+.....-|+|-||.+.|++.+|..+.+   ..-|++.|.+| +..++|....  + .|.|-+..
T Consensus        96 rw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~~-~~~v~v~f~~~~~~~G~w~fHC  165 (181)
T d1kv7a3          96 RWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGN-VSEVLVKFNHDAPKEHAYMAHC  165 (181)
T ss_dssp             EEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEESSS-EEEEEECCCSCCCGGGCEEEEE
T ss_pred             EEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEeCCC-ceEEEEEEEeeCCCCCeEEEeC
Confidence            7999999987778999999999999999998754   34689999665 4456666543  2 35555444

>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: White campion (Silene pratensis) [TaxId: 52853]

Probab=95.18  E-value=0.015  Score=41.26  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=25.1

Q ss_pred             EEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          268 VILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       268 virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .+.+.++.||.+-|+|-.  |..+||-..++|
T Consensus        69 ~~~~tf~~~G~y~y~C~~--H~~~GM~G~I~V   98 (99)
T d1bypa_          69 EYSVTLTEKGTYKFYCAP--HAGAGMVGKVTV   98 (99)
T ss_dssp             EEEEEECSCEEEEEECGG--GTTTTCEEEEEE
T ss_pred             eEEEEecCCceEEEEECc--CCCCCCEEEEEE
Confidence            345566899999999976  999999998887

>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Plastocyanin
species: Ulva pertusa, a sea lettuce [TaxId: 3120]

Probab=94.83  E-value=0.028  Score=39.71  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=27.1

Q ss_pred             CCCCEEEEEEEecCCeeeEEEeeehhhhccCceEEEEE
Q 020366          262 YPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       262 p~~g~~virf~adnpG~W~~HCHi~~h~~~Gm~~~~~v  299 (327)
                      .++..  +.+..+.||.+.|+|-.  |..+||...++|
T Consensus        64 ~~~~~--~~~~f~~~G~y~y~C~~--H~~~GM~G~I~V   97 (98)
T d1iuza_          64 SKGET--VVRKLSTPGVYGVYCEP--HAGAGMKMTITV   97 (98)
T ss_dssp             STTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred             CCCcE--EEEecCCCceEEEEeCC--CccCCCeEEEEE
Confidence            34443  45667899999999976  999999999887

>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Quinol oxidase (CyoA)
species: Escherichia coli [TaxId: 562]

Probab=93.39  E-value=0.16  Score=39.13  Aligned_cols=74  Identities=11%  Similarity=0.032  Sum_probs=52.1

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +-+.++.|+.|++.+.+.+-.        |.|+|-+.+                 ...|   +-||-...+.|.++.||.
T Consensus        27 n~l~lP~g~pV~~~ltS~DVi--------HsF~vP~l~-----------------~k~d---aiPG~~~~~~~~~~~~G~   78 (158)
T d1cyxa_          27 NEIAFPANTPVYFKVTSNSVM--------HSFFIPRLG-----------------SQIY---AMAGMQTRLHLIANEPGT   78 (158)
T ss_dssp             SEEEEETTSCEEEEEEESSSC--------EEEEEGGGT-----------------EEEE---ECTTCCEEEEECCSSSEE
T ss_pred             eeEEeeCCCeEEEEEEcCCcc--------hhhhhhhcc-----------------eeec---cCCCceeeeeeeecCCCc
Confidence            347899999999999988654        356663222                 1222   445667789999999999


Q ss_pred             eEEEeeehhh-hccCceEEEEEE
Q 020366          279 WNMRSAIWER-QYLGQQFYLKVW  300 (327)
Q Consensus       279 W~~HCHi~~h-~~~Gm~~~~~v~  300 (327)
                      +...|...-. .|..|...+.+.
T Consensus        79 y~g~Cae~CG~gH~~M~~~v~vv  101 (158)
T d1cyxa_          79 YDGICAEICGPGHSGMKFKAIAT  101 (158)
T ss_dssp             EEEEECSCCSTTSTTCCEEEEEE
T ss_pred             EEEEchhhcCcccccCceEEEEE
Confidence            9999998553 366676655544

>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Spore coat protein A, CotA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.17  E-value=0.12  Score=39.58  Aligned_cols=65  Identities=11%  Similarity=0.201  Sum_probs=48.4

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccc---------------------eeeEeeEEEEcCCceEEEEEEeCCCCC
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT---------------------IQNIYDSLDVHVGQSVSVLVTLNQPPK   59 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v---------------------~P~~v~~l~l~~GqRydvlv~~~~~~~   59 (327)
                      +|+|+|.+.. ..-|+|-|+.|.||+.+|...                     ++..-|.+.|.+|+++.|.++....+|
T Consensus        52 ~W~i~N~~~~-~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG  130 (154)
T d1gska3          52 IWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG  130 (154)
T ss_dssp             EEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE
T ss_pred             EEEEEeCCCC-CCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCc
Confidence            4789998764 589999999999998876321                     122358999999999999998654467


Q ss_pred             ceEEEEE
Q 020366           60 DYYIVAS   66 (327)
Q Consensus        60 ~y~ir~~   66 (327)
                      .|-+...
T Consensus       131 ~w~~HCH  137 (154)
T d1gska3         131 RYVWHCH  137 (154)
T ss_dssp             EEEEEES
T ss_pred             ceEEecC
Confidence            6544443

>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Coagulation factor V
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.11  E-value=0.0033  Score=46.55  Aligned_cols=57  Identities=9%  Similarity=0.207  Sum_probs=36.3

Q ss_pred             CeeEEecCCC-cEEEEEEeCCeEEEEEecCccceeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEE
Q 020366            1 MFRISNVGLS-TSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAS   66 (327)
Q Consensus         1 RlRliNa~~~-~~~~~sidgh~l~VIa~DG~~v~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~   66 (327)
                      ||+|+|.|.. -...+.+.|+.+.+        .+...|++.|.||++.++.++++. +|.|++...
T Consensus        46 ~~~v~n~g~~~~~h~iH~Hg~~f~~--------~~~~~dtv~i~pg~~~~v~~~a~~-pG~w~~HCH  103 (116)
T d1sdda2          46 SWHLIGMSSGPELFSIHFNGQVLEQ--------NHHKISAITLVSATSTTANMTVSP-EGRWTIASL  103 (116)
T ss_dssp             ---BBCCCSSSCEECCBCSSTTCEE--------TTEECSCCCEETTCCBC---------CCCCCBCC
T ss_pred             EEEEeccccCCCceeEEEecccccc--------CCcccceEeecccEEEEEEEEcCC-CeEEEEEcC
Confidence            6889998874 46788888888865        345678899999999999999875 688877554

>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Amicyanin
species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]

Probab=93.00  E-value=0.27  Score=34.91  Aligned_cols=70  Identities=9%  Similarity=-0.002  Sum_probs=42.6

Q ss_pred             EEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCeeeE
Q 020366          201 MQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWN  280 (327)
Q Consensus       201 ~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~W~  280 (327)
                      +.++.|++|.|  .|.+...|.+-.....       .+.              ..-|.-.+.+++  ...+.++.||.+.
T Consensus        36 i~V~~GdtV~f--~N~d~~~H~v~~~~~~-------~~~--------------~~f~s~~~~~~~--~~~~tf~~~G~y~   90 (106)
T d1id2a_          36 VTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGE--------------DAFRGEMMTKDQ--AYAITFNEAGSYD   90 (106)
T ss_dssp             EEECTTCEEEE--EECSSSCBCCEECTTT-------SSS--------------SCEECCCBCTTE--EEEEEECSCEEEE
T ss_pred             EEECCCCEEEE--EECCCCceeEEecccc-------CCc--------------ccccccccCCCc--eEEEecCCCeEEE
Confidence            67899999877  4777666654322110       000              011111222333  3456779999999


Q ss_pred             EEeeehhhhccCceEEEEE
Q 020366          281 MRSAIWERQYLGQQFYLKV  299 (327)
Q Consensus       281 ~HCHi~~h~~~Gm~~~~~v  299 (327)
                      |+|=+  |  .||...+.|
T Consensus        91 y~C~~--H--~~M~G~I~V  105 (106)
T d1id2a_          91 YFCTP--H--PFMRGKVIV  105 (106)
T ss_dssp             EECSS--C--TTCEEEEEE
T ss_pred             EEccC--C--CCCEEEEEE
Confidence            99987  6  589888876

>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Nitrite reductase, NIR
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=91.73  E-value=0.12  Score=40.40  Aligned_cols=85  Identities=15%  Similarity=0.033  Sum_probs=67.4

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccce-e-eEeeEEEEcCCceEEEEEEeCCCCCceEEEEEecccCCCceeEE
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTI-Q-NIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATA   78 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v~-P-~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~~~~~~~~~~~a   78 (327)
                      |.||+|++..+.-+|++=|--+.-+=-+|.+.. | ..++...|.+|+..-+..+..+ +|.|.+......+.......|
T Consensus        79 tV~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~-PG~Y~~VdH~l~~A~~kGA~g  157 (178)
T d1mzya2          79 NVLFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHKGATA  157 (178)
T ss_dssp             EEEEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTCCEE
T ss_pred             eEEEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC-CeEEEEEccHHHHHHhCCCeE
Confidence            568999999999999998877765668899875 5 4589999999999999999997 699999887643321224678


Q ss_pred             EEEecCCC
Q 020366           79 ILHYTNSH   86 (327)
Q Consensus        79 il~y~~~~   86 (327)
                      +|...|..
T Consensus       158 ~l~V~G~~  165 (178)
T d1mzya2         158 HVLVEGEW  165 (178)
T ss_dssp             EEEEESCC
T ss_pred             EEEeCCCC
Confidence            99887764

>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Plastocyanin/azurin-like
domain: Rusticyanin
species: Thiobacillus ferrooxidans [TaxId: 920]

Probab=89.52  E-value=0.056  Score=41.38  Aligned_cols=67  Identities=13%  Similarity=0.018  Sum_probs=41.9

Q ss_pred             CeeEEecCCCcEEEEEEeCCeEEEEEecCccc-eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEEEe
Q 020366            1 MFRISNVGLSTSFNFRIQGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         1 RlRliNa~~~~~~~~sidgh~l~VIa~DG~~v-~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      +|+|+|.+......|.|-.|...+.+.++... .+...+...+.+||++.+.++....+|.||.....
T Consensus        71 ~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f~~~~~pGty~YhCh~  138 (153)
T d1e30a_          71 DVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQI  138 (153)
T ss_dssp             EEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEEEECCCSEEEEEECCS
T ss_pred             EEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEEEeCCCCeEEEEeCCc
Confidence            46677765433344444444444444444432 23344566789999999999876568999998753

>d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Cytochrome c oxidase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=89.23  E-value=0.56  Score=35.64  Aligned_cols=76  Identities=12%  Similarity=0.187  Sum_probs=53.5

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|++.++..+- .|       .|+|-+-+                 ..+|   .-||-...+.|.++.||.
T Consensus        67 ~~l~lP~g~~v~~~ltS~DV-iH-------sf~vP~l~-----------------~k~d---aiPG~~~~~~~~~~~~G~  118 (152)
T d3dtub1          67 TAMVVPVNKTVVVQVTGADV-IH-------SWTVPAFG-----------------VKQD---AVPGRLAQLWFRAEREGI  118 (152)
T ss_dssp             SCEEEETTSEEEEEEEESSS-CE-------EEEEGGGT-----------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred             CeEEEeCCCEEEEEEecCch-hh-------hhhccccc-----------------EEEE---cCCCCceEEEEEecCCCe
Confidence            34789999999999998764 33       56663332                 1122   224555678899999999


Q ss_pred             eEEEeeehh-hhccCceEEEEEEcC
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v~~~  302 (327)
                      +...|.-+- ..|..|-..+.|..+
T Consensus       119 y~g~C~e~CG~~H~~M~~~v~vv~~  143 (152)
T d3dtub1         119 FFGQCSELCGISHAYMPITVKVVSE  143 (152)
T ss_dssp             EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred             eEeecHhhcCccccCCeEEEEEECH
Confidence            999999855 346668888887754

>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]

Probab=88.60  E-value=0.59  Score=37.22  Aligned_cols=64  Identities=17%  Similarity=0.327  Sum_probs=48.6

Q ss_pred             eEEecCCCcEEEEEEeCCeEEEEEecCcc----ceeeEeeEEEE-cCCceEEEEEEeCCCCCceEEEEEe
Q 020366            3 RISNVGLSTSFNFRIQGHTMKLVEVEGSH----TIQNIYDSLDV-HVGQSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus         3 RliNa~~~~~~~~sidgh~l~VIa~DG~~----v~P~~v~~l~l-~~GqRydvlv~~~~~~~~y~ir~~~   67 (327)
                      -++|.......-|++-||.+.|++.+|..    ..|..-|.+.+ .+|+++-|...++. +|.|-++...
T Consensus        83 v~~~~~~~~~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~adn-pG~w~~HCHi  151 (200)
T d1hfua3          83 VVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHI  151 (200)
T ss_dssp             EEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESS
T ss_pred             EEeeccccccCceeecCCcEEEEeccCCCCCccccCcccceEEeCCCCEEEEEEEECCC-CeeeEEEeCC
Confidence            34566666678999999999999999865    34777899999 57899888888774 6755555543

>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=88.22  E-value=0.84  Score=36.68  Aligned_cols=64  Identities=8%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             eeEEecCC-----CcEEEEEEeCCeEEEEEecCccc-----------eeeEeeEEEEcCCceEEEEEEeCCCCCceEEEE
Q 020366            2 FRISNVGL-----STSFNFRIQGHTMKLVEVEGSHT-----------IQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVA   65 (327)
Q Consensus         2 lRliNa~~-----~~~~~~sidgh~l~VIa~DG~~v-----------~P~~v~~l~l~~GqRydvlv~~~~~~~~y~ir~   65 (327)
                      +.|.|.+.     ....-|+|.||.+.|++.+++..           .|..-|.+.+.+|+.+.|.++++. +|.+-++.
T Consensus        91 ivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adn-pG~w~~HC  169 (214)
T d1aoza3          91 VILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAFHC  169 (214)
T ss_dssp             EEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEEEE
T ss_pred             EEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCC-CeeEEEEE
Confidence            56778654     23578999999999999986542           356678999999999999999985 67555555


Q ss_pred             E
Q 020366           66 S   66 (327)
Q Consensus        66 ~   66 (327)
                      .
T Consensus       170 H  170 (214)
T d1aoza3         170 H  170 (214)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1v54b1 b.6.1.2 (B:91-227) Cytochrome c oxidase {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Cytochrome c oxidase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.64  E-value=0.74  Score=34.27  Aligned_cols=76  Identities=9%  Similarity=0.093  Sum_probs=53.9

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.++.|+.|++.++..+-. |       .|+|-+.|                 ..+|.   =||-...+.|.++.+|.
T Consensus        50 ~~l~lP~g~~v~~~ltS~DVi-H-------sf~iP~l~-----------------~k~Da---iPG~~~~~~~~~~~~G~  101 (137)
T d1v54b1          50 NRVVLPMEMTIRMLVSSEDVL-H-------SWAVPSLG-----------------LKTDA---IPGRLNQTTLMSSRPGL  101 (137)
T ss_dssp             SCEEEETTSCEEEEEEESSSC-E-------EEEEGGGT-----------------EEEEE---CTTCCEEEEECCSSCEE
T ss_pred             CceEeeccccceeeeccCccc-c-------ccccchhh-----------------eeeec---cCCcEEeeeeccCCCCc
Confidence            447899999999999987653 3       56663332                 12333   24556678899999999


Q ss_pred             eEEEeeehh-hhccCceEEEEEEcC
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKVWNA  302 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v~~~  302 (327)
                      +..-|.-+- ..|..|-..+.|..+
T Consensus       102 y~g~C~e~CG~~H~~M~~~v~vv~~  126 (137)
T d1v54b1         102 YYGQCSEICGSNHSFMPIVLELVPL  126 (137)
T ss_dssp             EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred             eEeeeeeecCCCcCCCeEEEEEeCH
Confidence            999999754 346668888877754

>d3ehbb1 b.6.1.2 (B:108-252) Cytochrome c oxidase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Periplasmic domain of cytochrome c oxidase subunit II
domain: Cytochrome c oxidase
species: Paracoccus denitrificans [TaxId: 266]

Probab=85.63  E-value=1.4  Score=33.03  Aligned_cols=77  Identities=10%  Similarity=0.118  Sum_probs=54.0

Q ss_pred             eEEEecCCcEEEEEEEeCCCCcCceeecCCCeEEEEeccCCCCccccccCCCCCCCceeeEEeCCCCEEEEEEEecCCee
Q 020366          199 SVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGM  278 (327)
Q Consensus       199 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~  278 (327)
                      +.+.+|.|+.|++.|+..+-.        |.|+|-+-+                 ..+|.  | ||-...+.|.++-||.
T Consensus        53 n~LvlP~g~~V~~~ltS~DVi--------HsF~vP~l~-----------------~K~Da--v-PG~~~~~~~~~~~~G~  104 (145)
T d3ehbb1          53 NPVVVPVGKKVLVQVTATDVI--------HAWTIPAFA-----------------VKQDA--V-PGRIAQLWFSVDQEGV  104 (145)
T ss_dssp             SCEEEETTSEEEEEEEESSSC--------EEEEEGGGT-----------------EEEEE--C-TTCCEEEEEECSSSEE
T ss_pred             ceEEEeccceEEEEEEeCccc--------ccccCccce-----------------eeeec--c-CCCceeEEEEEcCCcc
Confidence            447899999999999987543        456663332                 23342  2 3555678899999999


Q ss_pred             eEEEeeehh-hhccCceEEEEEEcCc
Q 020366          279 WNMRSAIWE-RQYLGQQFYLKVWNAV  303 (327)
Q Consensus       279 W~~HCHi~~-h~~~Gm~~~~~v~~~~  303 (327)
                      +...|.-+= ..|..|-..+.|..++
T Consensus       105 y~g~C~e~CG~~H~~M~~~v~v~~~~  130 (145)
T d3ehbb1         105 YFGQCSELCGINHAYMPIVVKAVSQE  130 (145)
T ss_dssp             EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred             eEeecceeecccccCCeEEEEEeCHH
Confidence            999998754 3466688888776543

>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]}

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Laccase
species: Rigidoporus lignosus [TaxId: 219653]

Probab=84.33  E-value=1.3  Score=34.59  Aligned_cols=55  Identities=18%  Similarity=0.388  Sum_probs=41.1

Q ss_pred             EEEEEEeCCeEEEEEecCccc----eeeEeeEEEEcCC-ceEEEEEEeCCCCCceEEEEEe
Q 020366           12 SFNFRIQGHTMKLVEVEGSHT----IQNIYDSLDVHVG-QSVSVLVTLNQPPKDYYIVAST   67 (327)
Q Consensus        12 ~~~~sidgh~l~VIa~DG~~v----~P~~v~~l~l~~G-qRydvlv~~~~~~~~y~ir~~~   67 (327)
                      ..-|++-||+|.|++.+|...    .|..-|.+.|.+| +++-+-..++. +|.|-+....
T Consensus        91 ~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~adn-pG~w~~HCHi  150 (190)
T d1v10a3          91 NHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHI  150 (190)
T ss_dssp             SCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESC
T ss_pred             cccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEcCC-CeeEEEecCc
Confidence            356889999999999998753    4667899999875 67767777764 5766555553