Citrus Sinensis ID: 020432

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEEccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccc
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcc
mvncitlnsTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVStakthadleNQYRWIAYSSIFIGCCFVgiflsrteeprlkmglrgnshARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLvgedlsgcafvcgtlsfldkmSCGIAVYVLQSyqsmsptvldnnssitsltvldnnslistSYISVTRFGLGLIPAICSLVSVAVTFTmklhtpyskplvepllq
mvncitlnstsRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKlhtpyskplvepllq
MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ
***CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPY**********
MVNCIT*NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRT********************YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKP*VEPL**
MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ
*VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE************ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLV**LL*
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
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MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPYSKPLVEPLLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
Q6NUT3480 Major facilitator superfa yes no 0.748 0.508 0.289 6e-25
Q3U481476 Major facilitator superfa yes no 0.748 0.512 0.291 2e-23
>sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12 OS=Homo sapiens GN=MFSD12 PE=2 SV=2 Back     alignment and function desciption
 Score =  115 bits (287), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 25/269 (9%)

Query: 8   NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV---STAKTHADLE--NQ--------YR 54
           N   +V LT+ R AFT+VAN+++Y  A+++  +   S  +   D+   +Q        +R
Sbjct: 159 NDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFR 218

Query: 55  WIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARIS----------WAYWFKKILYY 104
            ++   + +G  F  +F   T E R         H  +           W +W ++  +Y
Sbjct: 219 NLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFY 278

Query: 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 164
           QV ++YM TRL+VN+SQ Y+A Y+   L + +   A +P ++Y+  F+ S L++ +    
Sbjct: 279 QVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCI 338

Query: 165 QRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224
            R   Y+S  G+L +   A  + L   +   +Y  A+ +G   A ++VT ++M   L+G 
Sbjct: 339 GRNMTYFS--GLLVILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIGP 396

Query: 225 DLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253
             +  AFV G++SFLDK++ G+AV  +QS
Sbjct: 397 HTNSGAFVYGSMSFLDKVANGLAVMAIQS 425

Homo sapiens (taxid: 9606)
>sp|Q3U481|MFS12_MOUSE Major facilitator superfamily domain-containing protein 12 OS=Mus musculus GN=Mfsd12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
255542273 454 conserved hypothetical protein [Ricinus 0.953 0.685 0.711 1e-134
224120942 457 predicted protein [Populus trichocarpa] 0.953 0.680 0.705 1e-133
224106589 442 predicted protein [Populus trichocarpa] 0.917 0.676 0.693 1e-131
359487445 453 PREDICTED: uncharacterized MFS-type tran 0.947 0.682 0.692 1e-128
449436234 457 PREDICTED: major facilitator superfamily 0.963 0.687 0.674 1e-125
297820866 459 AT3g60070/T2O9_50 [Arabidopsis lyrata su 0.963 0.684 0.671 1e-125
356525698 452 PREDICTED: uncharacterized MFS-type tran 0.944 0.681 0.692 1e-124
356557090 452 PREDICTED: uncharacterized MFS-type tran 0.944 0.681 0.689 1e-124
240255671 458 major facilitator protein [Arabidopsis t 0.960 0.683 0.668 1e-124
255646539 452 unknown [Glycine max] 0.944 0.681 0.686 1e-123
>gi|255542273|ref|XP_002512200.1| conserved hypothetical protein [Ricinus communis] gi|223548744|gb|EEF50234.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/326 (71%), Positives = 275/326 (84%), Gaps = 15/326 (4%)

Query: 1   MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSS 60
           MVNCI+LNSTSRVV+ SCRNAFTMVANLSLYAIA  +F+VS A+THAD++NQYRWIAY S
Sbjct: 144 MVNCISLNSTSRVVMASCRNAFTMVANLSLYAIALTIFNVSKAETHADIQNQYRWIAYLS 203

Query: 61  IFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 120
           I  GCCFVGIF   T+EPRLK+ L   S ARISW YWFKKILYYQV LVY+LTRLV NVS
Sbjct: 204 ICFGCCFVGIFHLGTKEPRLKISLHEISCARISWTYWFKKILYYQVGLVYVLTRLVQNVS 263

Query: 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF 180
           QAYLAFYVINDLRM QSAKALVPAIIYI SF++S+++QE++WTGQRLKAYYSAGG+LW+F
Sbjct: 264 QAYLAFYVINDLRMAQSAKALVPAIIYISSFVISVIMQEISWTGQRLKAYYSAGGILWMF 323

Query: 181 CGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLD 240
           CGA IL+LP +MSAFMY+++IF+GI NALM VTG+SM++VLVG DL+GCAFVCG+L FLD
Sbjct: 324 CGASILLLPRSMSAFMYIISIFIGIGNALMTVTGVSMESVLVGSDLNGCAFVCGSLGFLD 383

Query: 241 KMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICS 300
           K+SCG+A+Y LQS+Q++SP V DN               +S  +ISVTRFGLGL+PA CS
Sbjct: 384 KISCGLALYALQSFQTISPKVQDN---------------LSIEHISVTRFGLGLVPAFCS 428

Query: 301 LVSVAVTFTMKLHTPYSKPLVEPLLQ 326
           LV V VT++MKLHT Y KPL+EPLL+
Sbjct: 429 LVGVGVTYSMKLHTAYPKPLIEPLLE 454

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120942|ref|XP_002330864.1| predicted protein [Populus trichocarpa] gi|222872686|gb|EEF09817.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224106589|ref|XP_002314218.1| predicted protein [Populus trichocarpa] gi|222850626|gb|EEE88173.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359487445|ref|XP_002270525.2| PREDICTED: uncharacterized MFS-type transporter C19orf28-like [Vitis vinifera] gi|297741204|emb|CBI32155.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449436234|ref|XP_004135898.1| PREDICTED: major facilitator superfamily domain-containing protein 12-like [Cucumis sativus] gi|449489100|ref|XP_004158215.1| PREDICTED: major facilitator superfamily domain-containing protein 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297820866|ref|XP_002878316.1| AT3g60070/T2O9_50 [Arabidopsis lyrata subsp. lyrata] gi|297324154|gb|EFH54575.1| AT3g60070/T2O9_50 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356525698|ref|XP_003531460.1| PREDICTED: uncharacterized MFS-type transporter C19orf28-like [Glycine max] Back     alignment and taxonomy information
>gi|356557090|ref|XP_003546851.1| PREDICTED: uncharacterized MFS-type transporter C19orf28-like [Glycine max] Back     alignment and taxonomy information
>gi|240255671|ref|NP_191566.5| major facilitator protein [Arabidopsis thaliana] gi|21703097|gb|AAM74491.1| AT3g60070/T2O9_50 [Arabidopsis thaliana] gi|332646487|gb|AEE80008.1| major facilitator protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255646539|gb|ACU23744.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2101442458 AT3G60070 "AT3G60070" [Arabido 0.960 0.683 0.671 4.5e-114
TAIR|locus:2050626462 AT2G44280 "AT2G44280" [Arabido 0.953 0.673 0.649 2.2e-112
WB|WBGene00017530501 F16H11.1 [Caenorhabditis elega 0.742 0.483 0.328 1.1e-28
UNIPROTKB|Q6NUT3480 MFSD12 "Major facilitator supe 0.539 0.366 0.327 9.2e-28
MGI|MGI:3604804476 Mfsd12 "major facilitator supe 0.484 0.331 0.331 1.1e-25
ZFIN|ZDB-GENE-030131-4642507 mfsd12a "major facilitator sup 0.490 0.315 0.290 2.1e-24
TAIR|locus:2101442 AT3G60070 "AT3G60070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
 Identities = 221/329 (67%), Positives = 268/329 (81%)

Query:     1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSS 60
             MVNCI+LNSTSRV LTS RNAFTMVANL LYAIA +VF V  A +  D E QYRWIAYSS
Sbjct:   143 MVNCISLNSTSRVALTSSRNAFTMVANLGLYAIALVVFGVIKAGSKEDTETQYRWIAYSS 202

Query:    61 IFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 120
             I IGCCFV IFL  T+EPRL++ L+  S ARI W YWF+KILYYQVA+VY+LTRLV+NVS
Sbjct:   203 ITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYYQVAMVYLLTRLVLNVS 262

Query:   121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF 180
             QAYLAF+VI+DL+M QSAKALVPAIIYICSF+VS+LLQE+ W G+RLKAYY+AGG++W+F
Sbjct:   263 QAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEIPWNGKRLKAYYTAGGIIWIF 322

Query:   181 CGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLD 240
             CGA IL+LP ++S+FMY +++F+GIANALMMVT ISMQ+VLVG ++ GCAFVCG+LSFLD
Sbjct:   323 CGAAILLLPRDISSFMYAISVFIGIANALMMVTAISMQSVLVGAEVGGCAFVCGSLSFLD 382

Query:   241 KMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICS 300
             KMSCG+A+YVLQS+Q+ SP              L+NN    + Y+SVTR+GLGL+PA+CS
Sbjct:   383 KMSCGLALYVLQSHQTTSPR-----------GQLNNNQ--QSVYLSVTRYGLGLVPALCS 429

Query:   301 LVSVAVTFTMKLHTP--YSKPLV-EPLLQ 326
              V VAVTF M+L      SKPL+ EPLL+
Sbjct:   430 FVGVAVTFFMELEAAGSLSKPLLREPLLE 458
GO:0003674 "molecular_function" evidence=ND
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0016020 "membrane" evidence=ISS
TAIR|locus:2050626 AT2G44280 "AT2G44280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00017530 F16H11.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NUT3 MFSD12 "Major facilitator superfamily domain-containing protein 12" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:3604804 Mfsd12 "major facilitator superfamily domain containing 12" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4642 mfsd12a "major facilitator superfamily domain containing 12a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
pfam13347425 pfam13347, MFS_2, MFS/sugar transport protein 1e-24
COG2211467 COG2211, MelB, Na+/melibiose symporter and related 1e-06
>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein Back     alignment and domain information 
 Score =  103 bits (258), Expect = 1e-24
 Identities = 57/326 (17%), Positives = 100/326 (30%), Gaps = 40/326 (12%)

Query: 1   MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSS 60
           ++  +T +   R  L S R     +  L +  IA  + ++       +    Y   A   
Sbjct: 124 LIPVLTRDPKERTSLASYRRIGATIGGLLVAVIAPPLVALLGGG---NGAKGYFLAALII 180

Query: 61  IFIGCCFVGIFLSRT-EEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNV 119
             +      I  + T E   +    +     R  +   FK      + L+Y+L  L + V
Sbjct: 181 AILAVVGFLICFAGTKERVSVPPEQKEKVSLRDMFKALFKNRPLLILLLLYLLNALAMAV 240

Query: 120 SQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL--KAYYSAGGVL 177
               L +Y    L        L+            +      W  +R   K  +  G +L
Sbjct: 241 RNGLLLYYFTYVLGNAGLFSVLLLIGTIAAILGAPL----WPWLAKRFGKKRTFLLGMLL 296

Query: 178 WVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQN--VLVGEDLSG---CAFV 232
                  +  LP        VL +  GI   L  +   +M    V  GE  +G       
Sbjct: 297 AAIGLVLLFFLPPGSLWLFLVLVVLAGIGLGLATLLPWAMLADVVDYGEWKTGKRREGIT 356

Query: 233 CGTLSFLDKMSCGIAVYV------LQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYIS 286
               SF DK+   +   +         Y +                   N +  S + +S
Sbjct: 357 FSLYSFADKLGGALGGAIVGLLLAFAGYVA-------------------NATAQSAAALS 397

Query: 287 VTRFGLGLIPAICSLVSVAVTFTMKL 312
             R    LIPA+ +L+++ +     L
Sbjct: 398 GIRLLFTLIPAVLALLALLILRFYPL 423

This family is part of the major facilitator superfamily of membrane transport proteins. Length = 425
>gnl|CDD|225121 COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
COG2211467 MelB Na+/melibiose symporter and related transport 100.0
PRK11462460 putative transporter; Provisional 100.0
PRK09669444 putative symporter YagG; Provisional 100.0
PF13347428 MFS_2: MFS/sugar transport protein 100.0
PRK10429473 melibiose:sodium symporter; Provisional 100.0
PRK09848448 glucuronide transporter; Provisional 100.0
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 100.0
PRK10504471 putative transporter; Provisional 99.84
KOG4830412 consensus Predicted sugar transporter [Carbohydrat 99.83
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.77
TIGR00900365 2A0121 H+ Antiporter protein. 99.65
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.64
TIGR00901356 2A0125 AmpG-related permease. 99.61
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.6
TIGR00893399 2A0114 d-galactonate transporter. 99.56
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.54
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.53
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.52
PRK10489417 enterobactin exporter EntS; Provisional 99.5
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.48
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.48
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.47
PRK11010491 ampG muropeptide transporter; Validated 99.47
PRK09874408 drug efflux system protein MdtG; Provisional 99.44
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.44
PRK11902402 ampG muropeptide transporter; Reviewed 99.43
PRK11663434 regulatory protein UhpC; Provisional 99.43
PRK03545390 putative arabinose transporter; Provisional 99.43
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.42
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.42
TIGR00897402 2A0118 polyol permease family. This family of prot 99.41
TIGR00891405 2A0112 putative sialic acid transporter. 99.4
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.39
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.38
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.38
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.38
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.36
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.36
TIGR00896355 CynX cyanate transporter. This family of proteins 99.35
PRK11652394 emrD multidrug resistance protein D; Provisional 99.34
PRK09528420 lacY galactoside permease; Reviewed 99.34
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.33
PRK09952438 shikimate transporter; Provisional 99.32
TIGR00895398 2A0115 benzoate transport. 99.31
PRK09705393 cynX putative cyanate transporter; Provisional 99.29
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.29
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.28
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.27
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.27
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.27
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.26
PRK15075434 citrate-proton symporter; Provisional 99.25
PRK15011393 sugar efflux transporter B; Provisional 99.25
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.23
PRK11646400 multidrug resistance protein MdtH; Provisional 99.21
PLN00028476 nitrate transmembrane transporter; Provisional 99.21
PRK10642490 proline/glycine betaine transporter; Provisional 99.21
PRK12307426 putative sialic acid transporter; Provisional 99.2
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.2
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.19
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.19
PRK03699394 putative transporter; Provisional 99.19
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.19
PRK05122399 major facilitator superfamily transporter; Provisi 99.18
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.18
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.17
PRK11195393 lysophospholipid transporter LplT; Provisional 99.16
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.15
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.15
PRK10091382 MFS transport protein AraJ; Provisional 99.13
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.12
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.12
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.12
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.1
PRK10054395 putative transporter; Provisional 99.1
PRK12382392 putative transporter; Provisional 99.09
TIGR00898505 2A0119 cation transport protein. 99.07
PRK11043401 putative transporter; Provisional 99.04
COG2270438 Permeases of the major facilitator superfamily [Ge 99.04
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.02
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.0
PRK10133438 L-fucose transporter; Provisional 98.99
PRK03633381 putative MFS family transporter protein; Provision 98.97
PRK10077479 xylE D-xylose transporter XylE; Provisional 98.97
PRK03893496 putative sialic acid transporter; Provisional 98.96
KOG2532466 consensus Permease of the major facilitator superf 98.93
KOG2533495 consensus Permease of the major facilitator superf 98.84
PRK10489 417 enterobactin exporter EntS; Provisional 98.83
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 98.82
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 98.76
TIGR00900 365 2A0121 H+ Antiporter protein. 98.75
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.74
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.74
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.73
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 98.69
PRK05122 399 major facilitator superfamily transporter; Provisi 98.69
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.67
PRK10207489 dipeptide/tripeptide permease B; Provisional 98.66
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.65
PRK10054 395 putative transporter; Provisional 98.63
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.6
PRK12382 392 putative transporter; Provisional 98.6
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.59
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.58
TIGR00895 398 2A0115 benzoate transport. 98.58
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.57
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.56
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.55
PRK09528 420 lacY galactoside permease; Reviewed 98.53
PRK15462 493 dipeptide/tripeptide permease D; Provisional 98.51
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.48
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.47
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.47
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 98.47
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.47
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.45
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.44
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.43
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.42
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.41
PRK11043 401 putative transporter; Provisional 98.41
TIGR00893 399 2A0114 d-galactonate transporter. 98.4
TIGR00891 405 2A0112 putative sialic acid transporter. 98.4
PRK15011 393 sugar efflux transporter B; Provisional 98.39
PRK03545 390 putative arabinose transporter; Provisional 98.37
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.37
COG0738422 FucP Fucose permease [Carbohydrate transport and m 98.35
PRK11902 402 ampG muropeptide transporter; Reviewed 98.35
PRK11663 434 regulatory protein UhpC; Provisional 98.35
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.34
PRK10504 471 putative transporter; Provisional 98.34
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.32
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 98.32
KOG1330 493 consensus Sugar transporter/spinster transmembrane 98.31
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.3
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 98.29
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 98.28
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.26
PRK10091 382 MFS transport protein AraJ; Provisional 98.26
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 98.24
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.23
PRK03633 381 putative MFS family transporter protein; Provision 98.21
TIGR00805633 oat sodium-independent organic anion transporter. 98.21
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.2
PRK03699 394 putative transporter; Provisional 98.19
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.18
PRK11010 491 ampG muropeptide transporter; Validated 98.17
KOG2563480 consensus Permease of the major facilitator superf 98.16
PRK10429 473 melibiose:sodium symporter; Provisional 98.16
KOG3764464 consensus Vesicular amine transporter [Intracellul 98.15
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.14
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 98.14
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.13
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.12
PLN00028 476 nitrate transmembrane transporter; Provisional 98.11
PF13347 428 MFS_2: MFS/sugar transport protein 98.11
PRK10077 479 xylE D-xylose transporter XylE; Provisional 98.1
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 98.1
PRK12307 426 putative sialic acid transporter; Provisional 98.09
TIGR00897 402 2A0118 polyol permease family. This family of prot 98.09
PRK09584500 tppB putative tripeptide transporter permease; Rev 98.08
PRK10133 438 L-fucose transporter; Provisional 98.08
TIGR00901 356 2A0125 AmpG-related permease. 98.07
PRK09874 408 drug efflux system protein MdtG; Provisional 98.07
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.02
PRK11462 460 putative transporter; Provisional 98.01
PRK09669 444 putative symporter YagG; Provisional 97.97
PRK03893 496 putative sialic acid transporter; Provisional 97.96
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 97.96
PRK10406 432 alpha-ketoglutarate transporter; Provisional 97.95
PRK09952 438 shikimate transporter; Provisional 97.95
TIGR00805 633 oat sodium-independent organic anion transporter. 97.92
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 97.89
PRK15403 413 multidrug efflux system protein MdtM; Provisional 97.88
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 97.87
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 97.87
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 97.87
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 97.86
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 97.86
COG2211 467 MelB Na+/melibiose symporter and related transport 97.82
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 97.79
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 97.79
KOG0569485 consensus Permease of the major facilitator superf 97.78
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 97.74
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.73
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 97.69
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 97.68
PRK10642 490 proline/glycine betaine transporter; Provisional 97.65
PF11700 477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 97.59
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 97.57
PRK09705 393 cynX putative cyanate transporter; Provisional 97.54
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 97.51
TIGR00892 455 2A0113 monocarboxylate transporter 1. 97.48
TIGR00896 355 CynX cyanate transporter. This family of proteins 97.42
PRK09848 448 glucuronide transporter; Provisional 97.37
PTZ00207 591 hypothetical protein; Provisional 97.37
KOG2816463 consensus Predicted transporter ADD1 (major facili 97.37
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 97.34
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 97.28
PRK15462493 dipeptide/tripeptide permease D; Provisional 97.26
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 97.25
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 97.23
TIGR00788 468 fbt folate/biopterin transporter. The only functio 97.19
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 97.16
PRK15075 434 citrate-proton symporter; Provisional 97.13
TIGR00898 505 2A0119 cation transport protein. 97.05
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 97.0
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 97.0
KOG0254 513 consensus Predicted transporter (major facilitator 96.95
KOG3764 464 consensus Vesicular amine transporter [Intracellul 96.9
PF1283277 MFS_1_like: MFS_1 like family 96.87
KOG1330493 consensus Sugar transporter/spinster transmembrane 96.86
KOG3098461 consensus Uncharacterized conserved protein [Funct 96.84
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 96.71
COG2270 438 Permeases of the major facilitator superfamily [Ge 96.67
KOG0569 485 consensus Permease of the major facilitator superf 96.6
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 96.56
KOG2532 466 consensus Permease of the major facilitator superf 96.44
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 96.4
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 96.23
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 96.22
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 96.06
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 95.91
KOG3626 735 consensus Organic anion transporter [Secondary met 95.88
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 95.76
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 95.73
KOG2533 495 consensus Permease of the major facilitator superf 95.61
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 95.59
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 95.58
KOG3810433 consensus Micronutrient transporters (folate trans 95.27
KOG2615451 consensus Permease of the major facilitator superf 95.22
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 95.19
KOG3762618 consensus Predicted transporter [General function 95.12
KOG0254513 consensus Predicted transporter (major facilitator 95.0
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 94.9
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 94.64
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 94.56
KOG2615 451 consensus Permease of the major facilitator superf 94.35
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 94.24
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 93.99
KOG2325 488 consensus Predicted transporter/transmembrane prot 93.87
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 93.87
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 92.94
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 91.59
KOG2325488 consensus Predicted transporter/transmembrane prot 91.28
KOG3762 618 consensus Predicted transporter [General function 90.82
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 90.31
KOG2504 509 consensus Monocarboxylate transporter [Carbohydrat 88.87
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 88.59
COG0477 338 ProP Permeases of the major facilitator superfamil 88.19
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 87.8
KOG0637498 consensus Sucrose transporter and related proteins 86.49
KOG2563 480 consensus Permease of the major facilitator superf 83.35
PTZ00207591 hypothetical protein; Provisional 81.09
COG3202509 ATP/ADP translocase [Energy production and convers 80.38
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=6e-54  Score=406.57  Aligned_cols=309  Identities=18%  Similarity=0.159  Sum_probs=272.8

Q ss_pred             CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432            1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL   80 (326)
Q Consensus         1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~   80 (326)
                      |.||||+||+||++++++|+.++.+|++++..+.+++...+++   +|.+.||+.+++++++++++..++|++.+|||+.
T Consensus       136 l~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~---~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~  212 (467)
T COG2211         136 LGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG---GDKALGYQGTALVLGVIGVILLLFCFFNVKERVV  212 (467)
T ss_pred             cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            6799999999999999999999999999998888888887763   3436899999999999999999999999999986


Q ss_pred             ccC-CC--CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHH
Q 020432           81 KMG-LR--GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILL  157 (326)
Q Consensus        81 ~~~-~~--~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~  157 (326)
                      ++. .+  .+.+.++++..++|||||+.+++.+++...+.+..++...||++|++|+++..............+++.+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~  292 (467)
T COG2211         213 ETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILW  292 (467)
T ss_pred             ccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhH
Confidence            433 22  345677788899999999999999999999999999999999999999855444455556666677778999


Q ss_pred             HHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-----CCCCceEE
Q 020432          158 QEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE-----DLSGCAFV  232 (326)
Q Consensus       158 ~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-----~~r~~g~i  232 (326)
                      |++.||+|| |+++..+.++++++.+.+++.++++...+++..++.++|.+..+.++|+|+||++||     |+|+||++
T Consensus       293 p~L~~~~gk-k~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~  371 (467)
T COG2211         293 PRLVKKFGK-KKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIV  371 (467)
T ss_pred             HHHHHHhch-HHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhH
Confidence            999999995 778999998989999999999977778888888999999999999999999999998     56999999


Q ss_pred             EehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccC
Q 020432          233 CGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKL  312 (326)
Q Consensus       233 ~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l  312 (326)
                      ||.++|..|+|.++++.+.|+.++..||+||..             +|+++++++|+.++.++|+++.+++++++.+||+
T Consensus       372 ~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~-------------~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L  438 (467)
T COG2211         372 YSGMTFFRKLGLALAGFIPGWILGAIGYVPNVS-------------AQSASALFGIRFLFIILPALLLLLAAIIIFFYKL  438 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcc-------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999998651             2344558999999999999999999999999999


Q ss_pred             CCCCCccccccccC
Q 020432          313 HTPYSKPLVEPLLQ  326 (326)
Q Consensus       313 ~~~~~~~i~~~~~~  326 (326)
                      |||+|++|+|||.|
T Consensus       439 ~~~~~~~I~~eL~~  452 (467)
T COG2211         439 NEKMHKEIIEELEQ  452 (467)
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999999865

>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 45/254 (17%), Positives = 78/254 (30%), Gaps = 76/254 (29%)

Query: 118 NVSQAYLAFYVINDLRMGQSAKALVPAII---YICSFIVSILLQEMAWTGQRLKAYYSAG 174
            VS     F+ +   +  +  +  V  ++   Y   F++S +  E        + Y    
Sbjct: 60  AVSGTLRLFWTLLS-KQEEMVQKFVEEVLRINY--KFLMSPIKTEQRQPSMMTRMYIEQR 116

Query: 175 GVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLV-GEDLSGC---- 229
             L+       +    N+S     L +      AL+ +     +NVL+ G  + G     
Sbjct: 117 DRLY---NDNQVFAKYNVSRLQPYLKL----RQALLELR--PAKNVLIDG--VLGSGKTW 165

Query: 230 --AFVCGTLSFLDKMSCGI----------AVYVLQSYQSMSPTV-------LDNNSSI-- 268
               VC +     KM   I             VL+  Q +   +        D++S+I  
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 269 -------------------TSLTVLDN--NS------------LISTSYISVTRFGLGLI 295
                                L VL N  N+            L++T +  VT F     
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT 285

Query: 296 PAICSLVSVAVTFT 309
               SL   ++T T
Sbjct: 286 TTHISLDHHSMTLT 299

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.7
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.49
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.34
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.14
2cfq_A417 Lactose permease; transport, transport mechanism, 99.02
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 98.85
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 98.81
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 98.76
2xut_A 524 Proton/peptide symporter family protein; transport 98.75
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 98.7
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.46
2xut_A524 Proton/peptide symporter family protein; transport 98.25
2cfq_A 417 Lactose permease; transport, transport mechanism, 98.05
4gc0_A 491 D-xylose-proton symporter; MFS, transport protein; 97.76
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=99.70  E-value=3.3e-16  Score=148.47  Aligned_cols=243  Identities=9%  Similarity=-0.018  Sum_probs=168.2

Q ss_pred             cccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhcc-chhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432            4 CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM   82 (326)
Q Consensus         4 ~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~   82 (326)
                      +.. +++||.+..+....+..+|.++...+...+...          .| |++...+.+++.++..++..+..+|++.+.
T Consensus       146 ~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  214 (451)
T 1pw4_A          146 HWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW----------FNDWHAALYMPAFCAILVALFAFAMMRDTPQSC  214 (451)
T ss_dssp             TTC-TTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH----------TCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTT
T ss_pred             HHC-CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hccHHHHHHHHHHHHHHHHHHHHhhccCCHhhc
Confidence            444 358899999999999998887766555443332          34 666666666666655555545566643321


Q ss_pred             CC---CC---------------Ccchhhh-HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh
Q 020432           83 GL---RG---------------NSHARIS-WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVP  143 (326)
Q Consensus        83 ~~---~~---------------~~~~~~~-l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~  143 (326)
                      ..   ++               +.+.++. .+..+|||.++...+..++..........+++.|+++..|.++...+.+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  294 (451)
T 1pw4_A          215 GLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAY  294 (451)
T ss_dssp             CCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHH
T ss_pred             CCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence            00   00               1111221 57889999999888888888888888889999999887777655556666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc--ccchhhhhHhHHHHH-HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHh
Q 020432          144 AIIYICSFIVSILLQEMAWTG--QRLKAYYSAGGVLWV-FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNV  220 (326)
Q Consensus       144 ~~~~i~~~i~~~~~~~l~k~~--gkkk~~~~~~~~l~~-~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD  220 (326)
                      ....++.+++.++.+++.+|.  ++ |+....+..+.. ++...+.+.+..+.+...+...+.|++.+......+++..|
T Consensus       295 ~~~~~~~~~~~~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  373 (451)
T 1pw4_A          295 FLYEYAGIPGTLLCGWMSDKVFRGN-RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALE  373 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSTTC-HHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence            667778899999999999887  75 555555554444 33333333333355566666677888888888888899999


Q ss_pred             hhcCCCCCceEEEehhHHHHHH-HhhHHHHhhhhcccCCCc
Q 020432          221 LVGEDLSGCAFVCGTLSFLDKM-SCGIAVYVLQSYQSMSPT  260 (326)
Q Consensus       221 ~id~~~r~~g~i~s~~sf~~Kl-~~~i~~~i~~~~l~~~~y  260 (326)
                      .++.+.|  |..+|..+....+ +..++..+.+.+.+..+|
T Consensus       374 ~~~~~~~--g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~  412 (451)
T 1pw4_A          374 LAPKKAA--GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW  412 (451)
T ss_dssp             TSCTTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             Hhchhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9988766  6778999999999 999999988877554443
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query326
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.5
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.03
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 98.61
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 98.59
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1.8e-13  Score=126.59  Aligned_cols=241  Identities=10%  Similarity=-0.007  Sum_probs=148.2

Q ss_pred             CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC----
Q 020432            8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG----   83 (326)
Q Consensus         8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~----   83 (326)
                      +++||.+..++...+..+|..+...+...+....         .+|++...+.+++..+..++.++..+|++++..    
T Consensus       146 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~---------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (447)
T d1pw4a_         146 SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF---------NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPI  216 (447)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT---------CCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSC
T ss_pred             HhhcccccccccccccchhhhhhhhhhhhHhhhh---------hcccccchhhhhhHHHHHHHHHHhcccchhhcccchh
Confidence            5788999999998888888776655544433322         234444444555554444444444554322110    


Q ss_pred             CC---------------CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHH
Q 020432           84 LR---------------GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYI  148 (326)
Q Consensus        84 ~~---------------~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i  148 (326)
                      ++               +....+...+..++||.++......++..........+.+.|+.+..+.+............+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (447)
T d1pw4a_         217 EEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY  296 (447)
T ss_dssp             TTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHH
T ss_pred             hhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchh
Confidence            00               001122346778899999888887888888888888889999888777655445555556677


Q ss_pred             HHHHHHHHHHHHHHhcccchhhhhHhHH--HHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432          149 CSFIVSILLQEMAWTGQRLKAYYSAGGV--LWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL  226 (326)
Q Consensus       149 ~~~i~~~~~~~l~k~~gkkk~~~~~~~~--l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~  226 (326)
                      ..+++.++.+++.+|.+||+........  +...+...+...+..+.+...+..++.|++.+......++...|..+.+.
T Consensus       297 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~  376 (447)
T d1pw4a_         297 AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA  376 (447)
T ss_dssp             HHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH
T ss_pred             hhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence            7888889999998877754332222111  11112222222333455555666667788877788888889999998776


Q ss_pred             CCceEEEehhHHHHHHHhhH-HHHhhhhcccCCC
Q 020432          227 SGCAFVCGTLSFLDKMSCGI-AVYVLQSYQSMSP  259 (326)
Q Consensus       227 r~~g~i~s~~sf~~Kl~~~i-~~~i~~~~l~~~~  259 (326)
                      |  |...|..++...++..+ +..+.|++.+..|
T Consensus       377 ~--g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g  408 (447)
T d1pw4a_         377 A--GTAAGFTGLFGYLGGSVAASAIVGYTVDFFG  408 (447)
T ss_dssp             H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            6  55567777777775544 4455565544333
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure