Citrus Sinensis ID: 020499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
Protein Sequence
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHEEccEEEEEEccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccHHHcHHHHHccccccccEEEEEEEccccccccccccccEEEEEEEcccHHHHHHHHHccccccccEEEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEEEcccHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEccccccEcccccccccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccHcccHHHHccccccccEEEEEcHEEEEccc
Coil and Loop (DISEMBL)
mmkttnsisvlsdppsrscLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSmysakpetcknqqcrlpgtealpegivsktsnlemrplwsspsklnnqrppmNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFakrflhpdivAEYNYIFlwdedigvenfnprrylsivkdegleisqpaldpvksevhhpitarrrnsKAHRRMYkykgsgrcddystappcigwvemMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCaqvifykpitsishslccingi
Flexible Loop (DISEMBL)
mmkttnsisvlsdppsRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSspsklnnqrPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEIsqpaldpvksevhhpitarrrnskahrrmykykgsgrcddysTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Low Complexity Region (SEG)
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Disordered region (IsUnstruct)
*****************SCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAK***********************************************NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLE******************************YKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCIN**
Disordered Region (DISOPRED)
***********************FIAAALICSVYFIGSSFVAKENKERLMRWGL****************************IVSKTSNLEM*****************NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Disordered Region (DISEMBL)
*************PPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS*****************RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Disordered Region (DISPRO)
**************PSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVH************QQC****TEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCING*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCINGI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
255575938	370	conserved hypothetical protein [Ricinus	0.932	0.818	0.700	1e-127
359486223	413	PREDICTED: uncharacterized protein LOC10	0.932	0.733	0.681	1e-123
356560121	385	PREDICTED: uncharacterized protein LOC10	0.932	0.787	0.673	1e-121
356541848	387	PREDICTED: uncharacterized protein LOC10	0.932	0.782	0.676	1e-119
92893672	355	Protein of unknown function DUF707 [Medi	0.929	0.850	0.672	1e-119
240255999	389	uncharacterized protein [Arabidopsis tha	0.889	0.742	0.675	1e-118
357445211	406	hypothetical protein MTR_2g005330 [Medic	0.929	0.743	0.645	1e-116
357445209	368	hypothetical protein MTR_2g005330 [Medic	0.929	0.820	0.645	1e-116
449515369	402	PREDICTED: uncharacterized LOC101205845,	0.892	0.721	0.652	1e-113
297735287	413	unnamed protein product [Vitis vinifera]	0.926	0.728	0.633	1e-113

>gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/304 (70%), Positives = 251/304 (82%), Gaps = 1/304 (0%)

Query: 2   MKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSA 61
           MK+    S   DP SRS LC+LF+ A+LICS YFIG SF+ KE KERL RW ++ ++ S 
Sbjct: 1   MKSLYCASASPDPKSRSYLCTLFVVASLICSAYFIGGSFIGKEYKERLARWQVIETVQST 60

Query: 62  KPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQK 121
           K   C++Q C+  GT+ALP+GIV KTS+ EMRPLW+S  + N Q+   +LLA+A GI QK
Sbjct: 61  KSTNCEDQ-CKPTGTKALPQGIVRKTSDFEMRPLWNSSLEDNKQKLSKSLLALAVGINQK 119

Query: 122 KIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDI 181
            +VDQIV+KFP  DFVVMLFHYDGVVD+W+DL W+D AIHVSA NQTKWWFAKRFLHPDI
Sbjct: 120 VVVDQIVKKFPLSDFVVMLFHYDGVVDKWRDLPWSDHAIHVSAVNQTKWWFAKRFLHPDI 179

Query: 182 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKA 241
           V+EY+Y+FLWDED+GVENFNP+RYLSI++DEGLEISQPALDP KS V+HPITAR+  S  
Sbjct: 180 VSEYDYLFLWDEDLGVENFNPKRYLSIIRDEGLEISQPALDPTKSAVYHPITARQPKSTV 239

Query: 242 HRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG 301
           HRR+YK+KGSGRC   ST+PPCIGWVEMMAPVFS AAWRCAW+MIQNDLIHAWGLD QLG
Sbjct: 240 HRRIYKFKGSGRCYGNSTSPPCIGWVEMMAPVFSTAAWRCAWHMIQNDLIHAWGLDFQLG 299

Query: 302 YCAQ 305
           YCAQ
Sbjct: 300 YCAQ 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera]

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/311 (68%), Positives = 247/311 (79%), Gaps = 8/311 (2%)

Query: 2   MKTTNSISVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLV------ 55
           MKT + IS+ SDP SRS LCSLFI A L C VYFI S F  K+ K+R  RW +       
Sbjct: 1   MKTLSCISLPSDPKSRSYLCSLFIGACLFCGVYFIASEFTVKDYKDRSSRWQISVFQNAH 60

Query: 56  -HSMYSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAI 114
            +S+ + +   CKNQ CR  G+EALPEGIV KTSNLE++PLW +        P  +LLA+
Sbjct: 61  SNSIQNTQSSKCKNQ-CRPSGSEALPEGIVVKTSNLEVQPLWGATLNGEKSSPSKSLLAM 119

Query: 115 AAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAK 174
           A GIKQK+IV+QIV KF   +FVVMLFHYDGVVDEW++  W+D AIHV+  NQTKWWFAK
Sbjct: 120 AVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWREFAWSDHAIHVTVVNQTKWWFAK 179

Query: 175 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITA 234
           RFLHPDIVAEYNYIFLWDED+GVENF+P RY+SIV+DEGLEISQPALDP KS VHH ITA
Sbjct: 180 RFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVEDEGLEISQPALDPKKSRVHHQITA 239

Query: 235 RRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW 294
           R RNS+ HRR YK++GSGRCDD STAPPC+GWVEMMAPVFS+AAWRC W+MIQN+LIHAW
Sbjct: 240 RVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMAPVFSKAAWRCVWHMIQNELIHAW 299

Query: 295 GLDIQLGYCAQ 305
           G+D+QLGYCAQ
Sbjct: 300 GVDMQLGYCAQ 310

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/306 (67%), Positives = 249/306 (81%), Gaps = 3/306 (0%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMY 59
           MK+ +S++  +L DP +R  L S+F+  +LI   YF+G++F AKE K+RL RWGL+H+M 
Sbjct: 1   MKSFDSVTGFILPDPKNRLFLWSVFLVVSLISGAYFVGNAFFAKEYKQRLARWGLIHTMP 60

Query: 60  SAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIK 119
            +K  +CK +QC   G+EALPEGI+++TSNLEMRPLW S       + P+NLLA+A G++
Sbjct: 61  DSKFNSCK-RQCLPFGSEALPEGIIARTSNLEMRPLWDSGKDNGILKRPLNLLAMAVGLE 119

Query: 120 QKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHP 179
           QK+IV++IV KF S DFVVMLFHYDG VD WK L W+ RAIHVSA NQTKWWFAKRFLHP
Sbjct: 120 QKEIVNKIVEKFLSSDFVVMLFHYDGFVDGWKSLAWSSRAIHVSAINQTKWWFAKRFLHP 179

Query: 180 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNS 239
           DIV EYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSEVHHP+T  +  S
Sbjct: 180 DIVVEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSEVHHPLTVHKAGS 239

Query: 240 KAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
           K HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQNDLIHAWGLD Q
Sbjct: 240 KVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQNDLIHAWGLDRQ 299

Query: 300 LGYCAQ 305
           LGYCAQ
Sbjct: 300 LGYCAQ 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/306 (67%), Positives = 245/306 (80%), Gaps = 3/306 (0%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMY 59
           MK+  S++  VL DP +R  L S+ I  +LI   YF+G++F AKE K+RL RWGL+H+M 
Sbjct: 1   MKSFGSVTGFVLPDPKNRLLLWSVLILVSLISGAYFVGNAFFAKEYKQRLARWGLIHTMP 60

Query: 60  SAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIK 119
            +K   CK +QC   G+EALPEGI+++TSNLEMRPLW S       + P+NLLA+A G+K
Sbjct: 61  HSKFNACK-RQCLPFGSEALPEGIIARTSNLEMRPLWDSGKDNRILKRPLNLLAMAVGLK 119

Query: 120 QKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHP 179
           QK+IV++IV KF S  FVVMLFHYDG VD WK L W+  AIHVSA NQTKWWFAKRFLHP
Sbjct: 120 QKEIVNKIVEKFLSSGFVVMLFHYDGFVDGWKSLAWSSCAIHVSAINQTKWWFAKRFLHP 179

Query: 180 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNS 239
           DIVAEYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSEVHHP+T  +  S
Sbjct: 180 DIVAEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSEVHHPLTVHKAVS 239

Query: 240 KAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
           K HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQNDLIHAWGLD Q
Sbjct: 240 KVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQNDLIHAWGLDRQ 299

Query: 300 LGYCAQ 305
           LGYCAQ
Sbjct: 300 LGYCAQ 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|92893672|gb|ABE91850.1| Protein of unknown function DUF707 [Medicago truncatula] gi|92893916|gb|ABE91966.1| Protein of unknown function DUF707 [Medicago truncatula]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/311 (67%), Positives = 255/311 (81%), Gaps = 9/311 (2%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAK 174
           + G+KQK++VD+IV+KFPS DFVVMLFHYDG VD WK+L W++RAIHVSA NQTKWWFAK
Sbjct: 119 SVGVKQKEVVDKIVKKFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIHVSAINQTKWWFAK 178

Query: 175 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITA 234
           RFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSE+HHP+T 
Sbjct: 179 RFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPGKSEIHHPLTV 238

Query: 235 RRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW 294
            +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C W+MIQNDLIHAW
Sbjct: 239 HKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQCVWHMIQNDLIHAW 298

Query: 295 GLDIQLGYCAQ 305
           GLD QLGYCAQ
Sbjct: 299 GLDRQLGYCAQ 309

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/299 (67%), Positives = 242/299 (80%), Gaps = 10/299 (3%)

Query: 16  SRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPE--------TCK 67
           +RSCLCS+ I  ALIC  YFI ++++AK+ KE+L++W +   M+++  +        TCK
Sbjct: 7   NRSCLCSVLITTALICGAYFICNAYLAKDFKEKLLKWEITDKMHNSTDKMQNATTTSTCK 66

Query: 68  NQQCRLPGTEALPEGIVSKTSNLEMRPLWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQ 126
           N   +  GTEALP+GI+ KTSNLE + LW+   +K       M+LLA+A GIKQK++V++
Sbjct: 67  NFN-KPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNK 125

Query: 127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
           +++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQTKWWFAKRFLHPDIVAEY 
Sbjct: 126 VIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYE 185

Query: 187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
           YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEVHHPITARR+ SK HRRMY
Sbjct: 186 YIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMY 245

Query: 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
           KYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQ
Sbjct: 246 KYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQ 304

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/324 (64%), Positives = 255/324 (78%), Gaps = 22/324 (6%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKF-------------PSKDFVVMLFHYDGVVDEWKDLVWADRAIH 161
           + G+KQK++VD+IV+KF             PS DFVVMLFHYDG VD WK+L W++RAIH
Sbjct: 119 SVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIH 178

Query: 162 VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 221
           VSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPAL
Sbjct: 179 VSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPAL 238

Query: 222 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 281
           DP KSE+HHP+T  +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C
Sbjct: 239 DPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQC 298

Query: 282 AWYMIQNDLIHAWGLDIQLGYCAQ 305
            W+MIQNDLIHAWGLD QLGYCAQ
Sbjct: 299 VWHMIQNDLIHAWGLDRQLGYCAQ 322

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445209|ref|XP_003592882.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481930|gb|AES63133.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/324 (64%), Positives = 255/324 (78%), Gaps = 22/324 (6%)

Query: 2   MKTTNSIS--VLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSM- 58
           MK  +S++  V  DP +R  L +L I  +LIC  YF+G++F AKE K+RL RWGL++SM 
Sbjct: 1   MKLFSSVTGVVFPDPKNRLFLWTLLILLSLICGAYFLGNAFSAKEYKQRLARWGLIYSMP 60

Query: 59  --YSAKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQ--RPPMNLLAI 114
              ++    CK +QCR  GT+ALP+GIV++TSNLE RPLW   S +NN+    P+NLLAI
Sbjct: 61  DTTTSNSNACK-KQCRPSGTQALPQGIVARTSNLETRPLWDD-SAVNNRISNHPLNLLAI 118

Query: 115 AAGIKQKKIVDQIVRKF-------------PSKDFVVMLFHYDGVVDEWKDLVWADRAIH 161
           + G+KQK++VD+IV+KF             PS DFVVMLFHYDG VD WK+L W++RAIH
Sbjct: 119 SVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFVVMLFHYDGFVDGWKNLAWSNRAIH 178

Query: 162 VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 221
           VSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPAL
Sbjct: 179 VSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPAL 238

Query: 222 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 281
           DP KSE+HHP+T  +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVFS+ +W+C
Sbjct: 239 DPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVFSKKSWQC 298

Query: 282 AWYMIQNDLIHAWGLDIQLGYCAQ 305
            W+MIQNDLIHAWGLD QLGYCAQ
Sbjct: 299 VWHMIQNDLIHAWGLDRQLGYCAQ 322

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515369|ref|XP_004164722.1| PREDICTED: uncharacterized LOC101205845, partial [Cucumis sativus]

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/299 (65%), Positives = 232/299 (77%), Gaps = 9/299 (3%)

Query: 9   SVLSDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKN 68
           S+LSD  +R  + + F A  L   VYFI + F+ K +     RW + +S  + K  TCKN
Sbjct: 2   SILSDAKNRLRIYTFFAALLLGAGVYFIANEFITKGS----FRWEVFYSAQNVKSSTCKN 57

Query: 69  QQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPM--NLLAIAAGIKQKKIVDQ 126
           Q CR PG+E+LPEGI+SKTSN E +PLW S   L N++P +  NLLAIA GIKQ+ +V +
Sbjct: 58  Q-CRPPGSESLPEGIISKTSNFEFQPLWGS--SLQNKKPKVSKNLLAIAVGIKQRHVVSK 114

Query: 127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
           I+ KFP  DF V+LFHYDGVVDEW++  W  RA+HVSA NQTKWWFAKRFLHPDIVAEYN
Sbjct: 115 IIEKFPQDDFDVILFHYDGVVDEWREFAWYSRALHVSALNQTKWWFAKRFLHPDIVAEYN 174

Query: 187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
           YIFLWDED+GV+ F+P+RY+SI+K+EGLEISQPALDPVKS+VH P+TAR+  SK HRR Y
Sbjct: 175 YIFLWDEDLGVDYFDPKRYISILKEEGLEISQPALDPVKSKVHQPLTARKTGSKVHRRFY 234

Query: 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
            +KG+GRC   ST PPC GWVEMMAPVFSRA WRC WYMIQNDLIHAWGLD QLGYCAQ
Sbjct: 235 NFKGAGRCYANSTGPPCTGWVEMMAPVFSRAGWRCTWYMIQNDLIHAWGLDRQLGYCAQ 293

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735287|emb|CBI17649.3| unnamed protein product [Vitis vinifera]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/306 (63%), Positives = 239/306 (78%), Gaps = 5/306 (1%)

Query: 2   MKTTNSISVLSDPPSR-SCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYS 60
           MK  N +S L+D  SR SC+CS+F  A+++C ++FIGS  + ++  E+L RWG+   M +
Sbjct: 1   MKLPNCVSQLADSKSRRSCVCSIFPTASVLCLIFFIGSVLIGQDYSEKLSRWGMSTGMLN 60

Query: 61  AKPETCKNQQCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQ 120
           +    C+NQ CR  G+EALP+GIV  +S+L+MRPLW  P K  + +   NLLA+A G+KQ
Sbjct: 61  SVSNKCENQ-CRANGSEALPKGIVVTSSDLDMRPLWGFPKKRKDLK--RNLLAVAVGVKQ 117

Query: 121 KKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPD 180
           K +V+++V KF S  FVVMLFHYDGVVDEWKD  W DR +HV+A NQTKWWFAKRFLHP+
Sbjct: 118 KDLVNKMVEKFLSYGFVVMLFHYDGVVDEWKDFKWCDRVLHVAAINQTKWWFAKRFLHPE 177

Query: 181 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSK 240
           IVAEYNYIFLWDED+GV +FNPRRY++ V+ EGLEISQPALD  KSEVHH IT R R S 
Sbjct: 178 IVAEYNYIFLWDEDLGVTDFNPRRYVATVQREGLEISQPALDGSKSEVHHQITLRGRRSD 237

Query: 241 AHRRMYKYKGSGR-CDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQ 299
            HRR++K  GSG+ CD+ STAPPC GW+E+MAPVFSR AWRC WYMIQNDLIHAWGLD+Q
Sbjct: 238 VHRRIFKSSGSGKICDENSTAPPCTGWIEVMAPVFSREAWRCVWYMIQNDLIHAWGLDMQ 297

Query: 300 LGYCAQ 305
           LGYCAQ
Sbjct: 298 LGYCAQ 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.889	0.742	0.675	1.4e-112
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.701	0.520	0.594	2.4e-76
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.704	0.538	0.593	5e-76
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.692	0.561	0.510	1e-61
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.692	0.589	0.493	3.1e-60
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.686	0.560	0.502	3.1e-60
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.692	0.601	0.484	1.7e-59
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.692	0.556	0.493	2.7e-59
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.695	0.570	0.493	5.7e-59
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.686	0.585	0.491	1.9e-58

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 202/299 (67%), Positives = 242/299 (80%)

Query:    16 SRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPE--------TCK 67
             +RSCLCS+ I  ALIC  YFI ++++AK+ KE+L++W +   M+++  +        TCK
Sbjct:     7 NRSCLCSVLITTALICGAYFICNAYLAKDFKEKLLKWEITDKMHNSTDKMQNATTTSTCK 66

Query:    68 NQQCRLPGTEALPEGIVSKTSNLEMRPLWS-SPSKLNNQRPPMNLLAIAAGIKQKKIVDQ 126
             N   +  GTEALP+GI+ KTSNLE + LW+   +K       M+LLA+A GIKQK++V++
Sbjct:    67 NFN-KPVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNK 125

Query:   127 IVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYN 186
             +++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQTKWWFAKRFLHPDIVAEY 
Sbjct:   126 VIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYE 185

Query:   187 YIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMY 246
             YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEVHHPITARR+ SK HRRMY
Sbjct:   186 YIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMY 245

Query:   247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
             KYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQNDLIHAWGLD QLGYCAQ
Sbjct:   246 KYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQ 304

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 138/232 (59%), Positives = 175/232 (75%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPM---NLLAIAAGIKQKKIVDQIVRKFPS 133
             + LP GI+   S+LE++PLWS  S L ++   M   NLLAI  G+KQK  VD +V+KF  
Sbjct:    83 KGLPRGIIQSRSDLELKPLWSRGS-LRSKGVEMTNRNLLAIPVGLKQKGNVDALVKKFLP 141

Query:   134 KDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDE 193
              +F ++LFHYDG +D+W DL W+ ++IH+ A NQTKWWFAKRFLHPD+V+ Y+YIFLWDE
Sbjct:   142 ANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFLHPDVVSIYDYIFLWDE 201

Query:   194 DIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGR 253
             D+GVENFNP RYL IVK  GLEISQPALD   +E+HH IT R +  K HRR+Y  +G  R
Sbjct:   202 DLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSKTKKFHRRVYINRGHKR 261

Query:   254 CDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
             C + S+ PPC G+VE MAPVFS+AAW C W +IQNDL+H WG+D++LGYCAQ
Sbjct:   262 CSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMDMKLGYCAQ 313

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 137/231 (59%), Positives = 174/231 (75%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPS--KLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             + LP GI+   S+LE++PLWSS S    + +    NLLA+  G+KQK  VD +V+KF   
Sbjct:    80 KGLPFGIMQPKSDLELKPLWSSSSLRSKSGELTNRNLLAMPVGLKQKDNVDAVVKKFLPA 139

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F V+LFHYDG +D+W DL W+ +AIH+ A NQTKWWFAKRFLHPDIV+ Y+Y+FLWDED
Sbjct:   140 NFTVILFHYDGNMDQWWDLEWSSKAIHIVAHNQTKWWFAKRFLHPDIVSIYDYVFLWDED 199

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVENFNP++YL IVK  GLEISQPAL P  +EVHH IT R R    HRR+Y  +G+ +C
Sbjct:   200 LGVENFNPQKYLRIVKTAGLEISQPALHPNSTEVHHRITVRSRTKIFHRRVYDSRGNMKC 259

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
              + S  PPC G+VE MAPVFSR+AW C W +IQNDL+H WG+D++LGYCAQ
Sbjct:   260 SNASEGPPCTGFVEGMAPVFSRSAWFCTWNLIQNDLVHGWGMDMKLGYCAQ 310

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 118/231 (51%), Positives = 155/231 (67%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E L  GI++  S+  +R LW  P + +    P  L+A   G  QK  VD  V+KF SK
Sbjct:   107 GAEMLTPGIIAPESDYYLRRLWGLPEE-DVPVKPKYLIAFTVGFGQKVNVDACVKKF-SK 164

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW++L W+ RAIHVS   QTKWW+AKRFLHPDIVA Y+Y+F+WDED
Sbjct:   165 DFTIVLFHYDGRTTEWEELEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDED 224

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +G+ENF+   Y+ ++K  GLEISQPA++  K ++   IT R+   + H+   K K  GRC
Sbjct:   225 LGLENFDVEEYIRLIKKHGLEISQPAVES-KKKITWEITKRKTKGEVHKDA-KEK-PGRC 281

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
             +D    PPC  ++E+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +
Sbjct:   282 ND-PHLPPCAAFIEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVE 331

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 114/231 (49%), Positives = 152/231 (65%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP GI+   ++  +R LW  PS+ + ++ P  L+    G +Q+  ++  V+KF S+
Sbjct:    90 GAELLPPGIIVAETDFYLRRLWGEPSE-DLKKKPKYLVTFTVGFEQRNNINAAVKKF-SE 147

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW    W+  AIH+SA  QTKWW+AKRFLHPD+V+ Y YIF+WDED
Sbjct:   148 DFQILLFHYDGRTTEWDQFEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDED 207

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN  RY+ +VK  GLEISQP L+P  + +   +T RR +   H+   K K  G C
Sbjct:   208 LGVEHFNADRYVELVKKHGLEISQPGLEP-NNGLTWEMTKRRGDRDVHKET-KEK-PGWC 264

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
              D    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +
Sbjct:   265 SD-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVE 314

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 117/233 (50%), Positives = 157/233 (67%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSK-LN-NQRPPMNLLAIAAGIKQKKIVDQIVRKFP 132
             G E LP  IV+  S+  +R LW  P++ L   QR    L+    G  Q+K +D +++KF 
Sbjct:    99 GAERLPPDIVTPESDFYLRRLWGDPNEDLTVKQR---YLVTFTVGYDQRKNIDTVLKKF- 154

Query:   133 SKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWD 192
             S +F +MLFHYDG   EW++  W+ RAIHVS   QTKWW+AKRFLHPDIVA Y YIF+WD
Sbjct:   155 SDNFSIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWD 214

Query:   193 EDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSG 252
             ED+GVE+F+  +YL++VK  GLEISQP L+P +  +   +T +R +++ H+  +  + +G
Sbjct:   215 EDLGVEHFDSEKYLAVVKKHGLEISQPGLEPYEG-LTWEMTKKRDDTEVHK--HAEERNG 271

Query:   253 RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
              C D    PPC  +VE+MAPVFSR AWRC W+MIQNDLIH WGLD  +  C Q
Sbjct:   272 WCTD-PNLPPCAAFVEIMAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQ 323

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 112/231 (48%), Positives = 153/231 (66%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP GIV   ++  +R LW  P++ + ++ P  L+    G +Q+  ++ +V+KF S+
Sbjct:    83 GAELLPPGIVVAKTDFYLRRLWGEPNE-DLKKKPKYLVTFTVGFEQRNHINGVVKKF-SE 140

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             DF ++LFHYDG   EW    W+  AIH+S   QTKWW+AKRFLHPD+V+ Y YIF+WDED
Sbjct:   141 DFQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDED 200

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN  +Y+ +VK  GLEISQP L+P  + +   +T RR + + H+   K K  G C
Sbjct:   201 LGVEHFNADKYIELVKKHGLEISQPGLEP-NNGLTWEMTKRRGDREVHKDT-KEK-PGWC 257

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
              D    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +
Sbjct:   258 KD-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVE 307

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 114/231 (49%), Positives = 151/231 (65%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP G+V+  S+  +R LW  P + + +  P  L     GI QK  +D  V+KF S+
Sbjct:   103 GAEMLPPGMVAAESDFYLRRLWGLPHE-DLKSEPRYLATFTVGINQKANIDACVKKF-SE 160

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F ++LFHYDG V EW +  W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED
Sbjct:   161 NFTIVLFHYDGRVTEWDEFEWSKTAIHISVRKQTKWWYAKRFLHPDIVARYDYIFVWDED 220

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVE+FN   Y+ +VK  GLEISQP L+P +  +   +T RR + + H+     +  G C
Sbjct:   221 LGVEHFNAEEYVKMVKKHGLEISQPGLEPNQG-LTWQMTKRRGDMEVHK--ITEERPGWC 277

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
              D    PPC  +VE+MAPVFSR AWRC W++IQNDL+H WGLD  L  C +
Sbjct:   278 SD-PHLPPCAAFVEIMAPVFSRNAWRCVWHVIQNDLVHGWGLDFALRRCVE 327

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 114/231 (49%), Positives = 148/231 (64%)

Query:    75 GTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSK 134
             G E LP   V+  S+  +R LW  P        P  L+A     +Q+K +D  V+KF S 
Sbjct:    97 GAEMLPPSFVAAESDFYLRRLWGLPKDDLPVVKPKYLVAFTVSYEQRKNIDACVKKF-SD 155

Query:   135 DFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDED 194
             +F ++LFHYDG   E+ +  W+ RAIHVS   QTKWW+AKRFLHPDI+A Y YIF+WDED
Sbjct:   156 NFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIFIWDED 215

Query:   195 IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRC 254
             +GVENF+   Y+ IV   GLEISQPA++  KS +   IT R    + H+ + +  G  RC
Sbjct:   216 LGVENFDAEEYIKIVNKHGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKPG--RC 272

Query:   255 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
             +D    PPC G++E+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +
Sbjct:   273 ND-PHLPPCAGFIEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVE 322

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 113/230 (49%), Positives = 149/230 (64%)

Query:    77 EALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDF 136
             E LP GI++  S+L +R LW +P + +  + P  L     G  Q+  +D  V KF S++F
Sbjct:    81 ERLPSGIIASESDLYLRRLWGNPDE-DLVKQPRYLATFTVGYNQRHNIDACVSKF-SENF 138

Query:   137 VVMLFHYDGVVDEWKD-LVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDI 195
              ++LFHYDGV   W D   W+  AIH+S   QTKWW+AKRFLHPDIVA Y+YIF+WDED+
Sbjct:   139 TIVLFHYDGVTSAWNDEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVARYDYIFIWDEDL 198

Query:   196 GVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCD 255
             GV++FN   Y+ IVK   LEISQP LDP ++  +  IT RR +S+ H+   +      C 
Sbjct:   199 GVDHFNAEEYIHIVKKHDLEISQPGLDP-ETGFNWQITKRREHSEVHKETDEKLDW--CS 255

Query:   256 DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQ 305
             +    PPC  +VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C +
Sbjct:   256 N-PPRPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVE 304


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      325       325   0.00087  116 3  11 22  0.48    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  273 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.26u 0.22s 27.48t   Elapsed:  00:00:01
  Total cpu time:  27.26u 0.22s 27.48t   Elapsed:  00:00:01
  Start:  Thu May  9 18:10:41 2013   End:  Thu May  9 18:10:42 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035311001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (411 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	325
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-124

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  357 bits (918), Expect = e-124
 Identities = 125/235 (53%), Positives = 151/235 (64%), Gaps = 5/235 (2%)

Query: 70  QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVR 129
                G E LP GIV   S+  +R LW SP + +    P  LLA   G  QK  VD  V+
Sbjct: 4   PTNPRGAERLPPGIVVSESDFYLRRLWGSPEE-DVASKPKYLLAFTVGYSQKANVDACVK 62

Query: 130 KFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIF 189
           KF S +F ++LFHYDG   EW +L W+ +AIHVSA  QTKWWFAKRFLHPDIVA Y YIF
Sbjct: 63  KF-SDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIF 121

Query: 190 LWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYK 249
           LWDED+GV+NF+   Y+ IVK  GLEISQP LDP + ++   IT RR + + H+   +  
Sbjct: 122 LWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKG 181

Query: 250 GSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCA 304
                   ST PPC G+VE+MAPVFSR AWRC W+MIQNDL+H WGLD  L  C 
Sbjct: 182 RCCD---NSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV 233

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	325
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	91.49
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	90.7
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	90.6
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	84.89

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=3.6e-121  Score=863.00  Aligned_cols=250  Identities=62%  Similarity=1.133  Sum_probs=242.9

Q ss_pred             cCCCCCCCCCCCCceecCCCcceecCCCCCCCCCCCCCCCcEEEEEeccccccchhHHhhcCCCCCcEEEEEEecCccCc
Q 020499           70 QCRLPGTEALPEGIVSKTSNLEMRPLWSSPSKLNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDE  149 (325)
Q Consensus        70 q~~~~g~e~Lp~giv~~~sd~~~r~Lwg~p~~~~~~~~~k~Lla~~VG~kqk~~Vd~~v~kf~~~nF~vmLfhYDg~vd~  149 (325)
                      ||+|+|+|+||+|||+++||||||||||+|+++. +.++|||||||||+|||++||++|+|| ++|||||||||||+||+
T Consensus         4 ~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~-~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~   81 (294)
T PF05212_consen    4 PCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL-PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDE   81 (294)
T ss_pred             CCCCCccccCCCCccccCCCceeeecCCCccccc-cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCc
Confidence            8999999999999999999999999999999886 568899999999999999999999999 99999999999999999


Q ss_pred             cccccccCceeEEEeecccceeeeccccCcchhccccEEEEecccccCCCCChHHHHHHHHhhCCccccCccCCCCCccc
Q 020499          150 WKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH  229 (325)
Q Consensus       150 w~d~ews~~aiHv~a~kqtKWwfakrfLhPdiva~YdYIFlwDeDL~vd~f~~~ry~~Ivr~~gLeISQPALd~~~s~~~  229 (325)
                      |+|||||++||||+++|||||||||||||||||++|||||||||||+||+|+|+|||+|||+|||||||||||+++|++|
T Consensus        82 w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~  161 (294)
T PF05212_consen   82 WDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIH  161 (294)
T ss_pred             hhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999989999


Q ss_pred             cceeeeecCcccceeeeeccCCCCCCCCCCCCCccceEeeeeccccHHHHHHHhhhhcCCCcceehhhhhhhhhhccCCC
Q 020499          230 HPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFY  309 (325)
Q Consensus       230 h~iT~R~~~~~vHr~~~~~~~~~~C~~~~~~ppctgfVEiMAPVFSr~Awrcvw~miQNDLvhGWGLD~~~~~c~q~~~~  309 (325)
                      |+||+|++++++||.   .++.+.|.+++++||||||||||||||||+|||||||||||||+|||||||+|+||+ ++++
T Consensus       162 ~~iT~R~~~~~vhr~---~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~  237 (294)
T PF05212_consen  162 HPITKRRPDSEVHRK---TRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRH  237 (294)
T ss_pred             eeEEeecCCceeEec---cCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-cccc
Confidence            999999999999993   567778888999999999999999999999999999999999999999999999999 6889


Q ss_pred             CCeEEEeeeeEEecCC
Q 020499          310 KPITSISHSLCCINGI  325 (325)
Q Consensus       310 ~kiGVVDa~~V~H~~~  325 (325)
                      +||||||||+|+|+|+
T Consensus       238 ~kiGVVDs~~VvH~gv  253 (294)
T PF05212_consen  238 KKIGVVDSQYVVHTGV  253 (294)
T ss_pred             ccEEEEeeEEEEEcCC
Confidence            9999999999999985

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=91.49  E-value=0.62  Score=39.67  Aligned_cols=97  Identities=15%  Similarity=0.205  Sum_probs=63.2

Q ss_pred             ccccEEEEecccccCCCCChHHHHHHHHhhCCccccCccCCCCCccccceeeeecCcccceeeeeccCCCCCCCCCCCCC
Q 020499          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  262 (325)
Q Consensus       183 a~YdYIFlwDeDL~vd~f~~~ry~~Ivr~~gLeISQPALd~~~s~~~h~iT~R~~~~~vHr~~~~~~~~~~C~~~~~~pp  262 (325)
                      +.+||+++.|+|..++.--++++.+.+++.+..+..|..-...+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            57999999999999988777787777764455444433221101                                   1


Q ss_pred             ccceEeeeeccccHHHHHHHhhhhcCCCcceehhhhhhhhhhccCCCCCeEEEeeeeEEecC
Q 020499          263 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCING  324 (325)
Q Consensus       263 ctgfVEiMAPVFSr~Awrcvw~miQNDLvhGWGLD~~~~~c~q~~~~~kiGVVDa~~V~H~~  324 (325)
                      +.++      +++|++|+.+ ..+ .+.-..||=|..+.+-+.. ...+| .+.+..+.|..
T Consensus       123 ~~~~------~~~~~~~~~~-g~~-~~~~~~~~eD~~~~~r~~~-~G~~i-~~~~~~~~h~~  174 (202)
T cd04185         123 FVGV------LISRRVVEKI-GLP-DKEFFIWGDDTEYTLRASK-AGPGI-YVPDAVVVHKT  174 (202)
T ss_pred             eEEE------EEeHHHHHHh-CCC-ChhhhccchHHHHHHHHHH-cCCcE-EecceEEEEcc
Confidence            1222      4788888866 333 3334578878777654432 35678 99999999864

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=90.70  E-value=1.1  Score=40.97  Aligned_cols=127  Identities=15%  Similarity=0.100  Sum_probs=70.8

Q ss_pred             ccccEEEEecccccCCCCChHHHHHHHHhh--CCccccCcc-CCCCCccccceeeeecCcccceeeeeccCCCCCCCCCC
Q 020499          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE--GLEISQPAL-DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  259 (325)
Q Consensus       183 a~YdYIFlwDeDL~vd~f~~~ry~~Ivr~~--gLeISQPAL-d~~~s~~~h~iT~R~~~~~vHr~~~~~~~~~~C~~~~~  259 (325)
                      +.+|||++.|+|..++.-.++++++.+++.  +.-+..|.. +.+ +....+..... ... .+...       ... .+
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~~~~-------~~~-~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRG-TSRRLPAIHLD-GLL-LRQIS-------LDG-LT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCC-CcccCCceeec-ccc-eeeec-------ccc-cC
Confidence            379999999999999988888999888776  566777764 432 11122221111 100 00000       000 00


Q ss_pred             CCCccceEeeeeccccHHHHHHHhhhhcCCCcceehhhhhhhhhhccCCCCCeEEEeeeeEEec
Q 020499          260 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCIN  323 (325)
Q Consensus       260 ~ppctgfVEiMAPVFSr~Awrcvw~miQNDLvhGWGLD~~~~~c~q~~~~~kiGVVDa~~V~H~  323 (325)
                      .+.-+.++=.-..+++|++++.+ .++..++ -.++-|..|..=+.. ...+|.++....+.|.
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~i-G~fde~~-fi~~~D~e~~~R~~~-~G~~i~~~~~~~~~H~  201 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRL-GMMDEEL-FIDHVDTEWSLRAQN-YGIPLYIDPDIVLEHR  201 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHh-CCccHhh-cccchHHHHHHHHHH-CCCEEEEeCCEEEEEe
Confidence            00000111000236899999987 4453443 235678776543332 3568999998888885

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=90.60  E-value=0.73  Score=36.92  Aligned_cols=92  Identities=15%  Similarity=0.160  Sum_probs=59.2

Q ss_pred             cccEEEEecccccCCCCChHHHHHHHHhh-CCccccCccCCCCCccccceeeeecCcccceeeeeccCCCCCCCCCCCCC
Q 020499          184 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  262 (325)
Q Consensus       184 ~YdYIFlwDeDL~vd~f~~~ry~~Ivr~~-gLeISQPALd~~~s~~~h~iT~R~~~~~vHr~~~~~~~~~~C~~~~~~pp  262 (325)
                      .+|||++.|+|...+...+.++.+.+.+. +..+..+.                                          
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence            79999999999998877777777654432 22222111                                          


Q ss_pred             ccceEeeeeccccHHHHHHHhhhhcCCCcceehhhhhhhhhhccCCCCCeEEEeeeeEEecC
Q 020499          263 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCING  324 (325)
Q Consensus       263 ctgfVEiMAPVFSr~Awrcvw~miQNDLvhGWGLD~~~~~c~q~~~~~kiGVVDa~~V~H~~  324 (325)
                          +=.-+.+|++++++.+ .-+ ++.-..+|-|..+...+.. ...+|..+....+.|.+
T Consensus       112 ----~~~~~~~~~~~~~~~~-~~~-~~~~~~~~eD~~~~~~~~~-~g~~i~~~~~~~~~h~~  166 (166)
T cd04186         112 ----VSGAFLLVRREVFEEV-GGF-DEDFFLYYEDVDLCLRARL-AGYRVLYVPQAVIYHHG  166 (166)
T ss_pred             ----CceeeEeeeHHHHHHc-CCC-ChhhhccccHHHHHHHHHH-cCCeEEEccceEEEecC
Confidence                0113447899999865 233 2222237778777765432 35789999999999964

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=84.89  E-value=2.2  Score=37.02  Aligned_cols=48  Identities=15%  Similarity=-0.044  Sum_probs=30.7

Q ss_pred             cccHHHHHHHhhhhcCCCcceehhhhhhhhhhccCCCCCeEEEeeeeEEec
Q 020499          273 VFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCIN  323 (325)
Q Consensus       273 VFSr~Awrcvw~miQNDLvhGWGLD~~~~~c~q~~~~~kiGVVDa~~V~H~  323 (325)
                      +|+|++++.+= .+..++ ...|-|+.+..-+. ....++..+....|.|.
T Consensus       157 ~~rr~~~~~~g-gfd~~~-~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         157 LISLEALEKVG-GFDEDL-FIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             EEcHHHHHHhC-CCCHHH-cCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence            58999999873 332232 23355777665443 23568988888888775

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	325
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 7e-05
 Identities = 40/284 (14%), Positives = 77/284 (27%), Gaps = 87/284 (30%)

Query: 12  SDPPSRSCLCSLFIAAALICSVYFIGSSFVAKENKERLMRWGLVHSMYSAKPETCKNQQC 71
            D P      +         S+  I  S   ++       W   H          ++   
Sbjct: 316 QDLPREVLTTNP-----RRLSI--IAESI--RDGLATWDNW--KHVNCDKLTTIIESSLN 364

Query: 72  RLPGTEA---------LPEG--IVSKTSNLEMRPLWSSPSK--------------LNNQR 106
            L   E           P    I +    L +  +W    K              L  ++
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTIL--LSL--IWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 107 PPMNLLAI----------AAGIKQ--KKIVDQ--IVRKFPSKDFVVM-----LFHYDG-- 145
           P  + ++I                  + IVD   I + F S D +        + + G  
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 146 -----VVDEWK-------DLVWADRAI-HVSAANQTKWWFAKRFLHPDI--VAEY-NYIF 189
                  +          D  + ++ I H S A     W A   +   +  +  Y  YI 
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA-----WNASGSILNTLQQLKFYKPYIC 535

Query: 190 LWDED-----IGVENFNPRRYLSIVKDEGLEISQPALDPVKSEV 228
             D         + +F P+   +++  +  ++ + AL      +
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	325
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	83.94

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=83.94  E-value=3  Score=35.12  Aligned_cols=118  Identities=8%  Similarity=-0.030  Sum_probs=66.2

Q ss_pred             ccccEEEEecccccCCCCChHHHHHHHHhh-CCccccCcc-----CCCCCccccceeeeecCcccceeeeeccCCCCCCC
Q 020499          183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD  256 (325)
Q Consensus       183 a~YdYIFlwDeDL~vd~f~~~ry~~Ivr~~-gLeISQPAL-----d~~~s~~~h~iT~R~~~~~vHr~~~~~~~~~~C~~  256 (325)
                      +..|||++.|+|..++.-.++++++.++++ +..+..+..     +.+ +...+.. . .+...+.          .   
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~----------~---  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVT----------W---  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHH----------H---
Confidence            678999999999999888888999888876 666655543     221 1111110 0 0000000          0   


Q ss_pred             CCCCCCccceEeeeeccccHHHHHHHhhhh----cCCCcceehhhhhhhhhhccCCCCCeEEEeeeeEEec
Q 020499          257 YSTAPPCIGWVEMMAPVFSRAAWRCAWYMI----QNDLIHAWGLDIQLGYCAQVIFYKPITSISHSLCCIN  323 (325)
Q Consensus       257 ~~~~ppctgfVEiMAPVFSr~Awrcvw~mi----QNDLvhGWGLD~~~~~c~q~~~~~kiGVVDa~~V~H~  323 (325)
                           ....++-..+=+|+|++++.+=..+    ..+.....+-|+.+...+..  ..++..++...+.|+
T Consensus       151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~--~g~~~~~~~~~~~~r  214 (255)
T 1qg8_A          151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH--FYPFYPLDEELDLNY  214 (255)
T ss_dssp             -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT--TCCBEEEEEEEEEEE
T ss_pred             -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH--hCCEEEecCcEEEEE
Confidence                 0011222234478999999874222    11222344567776654432  246999998877764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00