Citrus Sinensis ID: 020593

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
Protein Sequence
MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEMNKLPLERTKHPTSSSFPL
Secondary Structure (PSIPRED)
cccccHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHcccccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHcccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mpnsseelglhgensvqhvkedsEYVRLVisddprpaegdtlqpepetrTKSLIRWIRTLALCILLVIIILIFLkwgvpflfekvlfplmqweatafgrPVLAIVLIASLAlfpvflipsgpsmwLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVAlfrvspfpytIFNYAIVVTSMRFwpylcgsvagmVPEAFIYIYSGRLIRTLAdvkygnyhMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELergeangeetststgsgfemnklplertkhptsssfpl
Flexible Loop (DISEMBL)
mpnsseelglhgensvqhvkeDSEYVRLVISddprpaegdtlqpepetrtKSLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKelergeangeetststgsgfemnklplertkhptsssfpl
Low Complexity Region (SEG)
MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTlalcillviiiliflKWGVPFLFEKVLFPLMQWEATAFGRPvlaivliaslalFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEMNKLPLERTKHPTSSSFPL
Disordered region (IsUnstruct)
***************************************************SLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRAL*****************************************
Disordered Region (DISOPRED)
*******************************************************WIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKR*******************************************
Disordered Region (DISEMBL)
MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELER*************SGFEMNKLPLER***********
Disordered Region (DISPRO)
**********************SEYVRLVISD****************RTKSLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERG***********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEMNKLPLERTKHPTSSSFPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	324	2.2.26 [Sep-21-2011]
Q55909	209	TVP38/TMEM64 family membr	N/A	no	0.567	0.880	0.286	3e-11
Q6YI46	380	Transmembrane protein 64	yes	no	0.725	0.618	0.243	7e-08
A5DH87	349	Golgi apparatus membrane	N/A	no	0.774	0.719	0.245	3e-07
Q3U145	381	Transmembrane protein 64	yes	no	0.589	0.501	0.263	3e-07
Q6FTI0	323	Golgi apparatus membrane	yes	no	0.722	0.724	0.235	2e-05
Q6BQJ1	383	Golgi apparatus membrane	yes	no	0.648	0.548	0.244	2e-05
A7TMU9	319	Golgi apparatus membrane	N/A	no	0.509	0.517	0.218	0.0002
Q759P7	307	Golgi apparatus membrane	yes	no	0.5	0.527	0.242	0.0002

>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 15/199 (7%)

Query: 89  LMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGM 148
           L  W A AF    + +  +A++   P  ++  G     AG++FG  LG + + +G T+G 
Sbjct: 15  LGTWAAIAF----MLLYTVATVVFLPGSILTLG-----AGVVFGVILGSIYVFIGATLGA 65

Query: 149 VLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSP-FPYTIFNYA 207
              + VG   R     W+ +        +   E       ++V L R+SP FP+ + NYA
Sbjct: 66  TAAFLVG---RYLARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYA 122

Query: 208 IVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYG-NYHMTTVEIVYNIISFI 266
             +T++    Y+ GS+ GM+P   +Y+Y G L  +LA +    N    T++    I+ FI
Sbjct: 123 YGITNVSLKDYVIGSL-GMIPGTIMYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGFI 181

Query: 267 IAVLTIIAFTVYAKRALKE 285
             V   I  T  A++AL E
Sbjct: 182 ATVAVTIYVTKIARKALNE 200

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2

 Score = 58.2 bits (139), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 36/271 (13%)

Query: 56  WIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPV 115
           W R+L L     + +L  L +    L  + L  L+ W        V ++  +  + LF V
Sbjct: 119 WCRSLVL-----VCVLAALCFASLALVRRYLHHLLLW--------VESLDSLLGVLLFVV 165

Query: 116 -FLIPSGPSMW-------LAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLK 167
            F++ S P  W        AG ++G+ LG  ++MVG  IG  + + V    +  +  W+ 
Sbjct: 166 GFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVV---CKRLLTAWVA 222

Query: 168 RWPQQA----AMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSV 223
              Q +    A++R+   GS L   ++VAL R++P P+ + N    +T +    YL  S 
Sbjct: 223 ARIQSSEKLSAVIRVVEGGSGL---KVVALARLTPIPFGLQNAVFSITDLSLPNYLMASS 279

Query: 224 AGMVPEAFIYIYSGRLIRTLADV----KYGNYHMTTVEIVYNI-ISFIIAVLTIIAFTVY 278
            G++P   +  Y G  +RT+ DV        Y +  ++I+ +I + F +     +     
Sbjct: 280 VGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAA 339

Query: 279 AKRALKELERGEANGEETSTSTGSGFEMNKL 309
                 EL+     G + +TS  S +    L
Sbjct: 340 IVACEMELKSSLVKGNQPNTSGSSFYNKRTL 370

Homo sapiens (taxid: 9606)

>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 30/281 (10%)

Query: 49  RTKSLIRWIRTL---ALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIV 105
           R++S IR I       + I++ +++LIF K+    L E ++     W     GR +L   
Sbjct: 42  RSQSQIRQILIQIGGVVAIVIGVLVLIFHKY----LIELLVIISDDWAKLPGGRLIL--F 95

Query: 106 LIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLF-RDRIHQ 164
           L+     FP  +  S  S+ LAGM++G+  G+ ++   +  G  + + V   F R +  +
Sbjct: 96  LLVFFVGFPPLIGYSALSL-LAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGER 154

Query: 165 WLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAI-VVTSMRFWPYLCGSV 223
            +    +  A   +  E S L    ++ L R+ P PY++ N A+  +  +  W YL  SV
Sbjct: 155 LVNSNEKFRAFAEILREDSSLF---LLVLIRLCPLPYSLSNGALAAIPELSAWVYLGASV 211

Query: 224 AGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFII--AVLTIIAFTVYAKR 281
               P+  I+++ G  I+   D K      T+ +I+ ++IS ++  A  ++  F +Y K 
Sbjct: 212 I-TSPKMLIHLFVGHKIKEFGDAKTD----TSTKII-DVISILVTGAAASLTTFIIYRKM 265

Query: 282 ALK-ELERGEAN------GEETSTSTGSGFEMNKLPLERTK 315
             K    R  AN      G      +G+  E+N    ++  
Sbjct: 266 QQKLHHNRAGANYDAFVFGNFDDLESGTNVELNSADFDQDN 306

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (taxid: 294746)

>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 29/220 (13%)

Query: 56  WIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPV 115
           W R+L L     + +L  L +    L  + L  L+ W        V ++  +  + LF V
Sbjct: 120 WCRSLVL-----VCVLAALCFASLALVRRYLQHLLLW--------VESLDSLLGVLLFVV 166

Query: 116 -FLIPSGPSMW-------LAGMIFGYGLGFVIIMVGTTIGMVLPYWVG-LLFRDRIHQWL 166
            F++ S P  W        AG ++G+ LG  +++VG  IG  + + V   L    +   +
Sbjct: 167 GFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARI 226

Query: 167 KRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGM 226
           +   + +A++R+   GS L   ++VAL R++P P+ + N    +T +    YL  S AG+
Sbjct: 227 QNSDKLSAVIRVVEGGSGL---KVVALARLTPIPFGLQNAVFSITDVPLPSYLMASSAGL 283

Query: 227 VPEAFIYIYSGRLIRTLADV----KYGNYHMTTVEIVYNI 262
           +P   +  Y G  +RT+ DV        Y +  ++IV +I
Sbjct: 284 LPTQLLNSYLGTTLRTMEDVIAEQSLSGYFVFCLQIVISI 323

Mus musculus (taxid: 10090)

>sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TVP38 PE=3 SV=1

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 38/272 (13%)

Query: 51  KSLIRWIRTL-----ALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIV 105
            SL +W R L     AL I+L I++LIF          K+L  +++       R     +
Sbjct: 74  NSLPKWQRLLIILFGALVIVLGILMLIF--------HNKILDKVLETSKDLNERSSTNFI 125

Query: 106 LIASLALFPVFLIPSGPSMWLA---GMIFGYGL-GFVIIMVGTTIGMVLPYWVGLLFRDR 161
           L+  + LF V   P     +L+   G+I+G    G+ ++ +G+  G V  ++V   F++ 
Sbjct: 126 LL--VLLFFVGFPPMIGYSFLSTSTGLIYGVSFHGWFVLALGSVTGSVASFYV---FKNL 180

Query: 162 IHQWLKRWPQQAAMLRLAAEGSWLHQ---FRMVALFRVSPFPYTIFNYAIV-VTSMRFWP 217
           +H   ++        R  A  S L +   + M+AL R+ PFPY++ N AI  +  +    
Sbjct: 181 LHSRAEKLVHMNK--RFEAFASILQEDNSYLMLALLRLCPFPYSLTNGAIAGIYGISVKN 238

Query: 218 YLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIA--VLTIIAF 275
           +   ++    P+  IY++ G  I+ +A+        +T   +++++S +I   + T+ A+
Sbjct: 239 FTIANII-TTPKLLIYLFIGARIKNMAE------DHSTSSRIFDLVSILITLIIFTLTAW 291

Query: 276 TVYAKRALKELE-RGEANGEETSTSTGSGFEM 306
            +Y K   +  + + +A  + +S +    FE+
Sbjct: 292 LLYFKTKQRYAQLKNQAVAQNSSANREVDFEI 323

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TVP38 PE=3 SV=1

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 31/241 (12%)

Query: 56  WIRTLALCI-----LLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASL 110
           W RTL   +     ++V++I+IF K     + + ++    +W    FG+ +L  ++   +
Sbjct: 55  WKRTLLQVLFVFNAIVVVLIMIFHKS----IIQAIVVISDKWHGLKFGQGLLFTLVF--M 108

Query: 111 ALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWP 170
             FP  L  S  SM LAGM++G+  G++++   +  G    +   L+FR  +H   +R  
Sbjct: 109 VGFPPLLGFSALSM-LAGMVYGFVHGWILLACASISGSFCSF---LVFRYLLHSRAERLM 164

Query: 171 QQAAMLR----LAAEGSWLHQFRMVALFRVSPFPYTIFNYAI-VVTSMRFWPYLCGSVAG 225
                 R    +  E S L    ++ L R+ P PY++ N A+  +  +    Y   S+  
Sbjct: 165 NSNKKFRAFSEILREDSSLF---ILVLLRLCPLPYSLSNGALAAIPELPATTYFLASLI- 220

Query: 226 MVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFII--AVLTIIAFTVYAKRAL 283
             P+  I+I+ G  ++ L D   G     +  ++ +I+S II  A  ++  + +Y K   
Sbjct: 221 TSPKLMIHIFVGHKLKELGDDTKG----KSTHLI-DILSIIITGAAASLTTYIIYNKMQR 275

Query: 284 K 284
           K
Sbjct: 276 K 276

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 95/188 (50%), Gaps = 23/188 (12%)

Query: 128 GMIFGYGL-GFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLH 186
           G+I+G    G+VI+ +G   G +  +    LF+  +H   ++  Q     R AA  S L 
Sbjct: 144 GLIYGISFKGWVILAIGAVTGSICSF---ALFKTILHSRAEKLIQMNR--RFAAFASILQ 198

Query: 187 Q---FRMVALFRVSPFPYTIFNYAI-VVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRT 242
           +   + ++AL R+ PFPY++ N A+  V  +    +  G++    P+  IY++ G  I+ 
Sbjct: 199 ENNSYWILALLRLCPFPYSLTNGAVGAVYGVSIKNFAIGNII-TTPKLLIYLFIGSRIKN 257

Query: 243 LADVKYGNYHMTTVEIVYNIISFIIAVLT--IIAFTVYAKRALKELERGEANGEETSTST 300
           + + +      ++   +++++S ++ VL   + A+ +Y     K  +R +   ++++ +T
Sbjct: 258 MGETE------SSASKIFDLVSILLTVLALGLTAWVLY----FKTQKRYQQLQDQSTINT 307

Query: 301 GSGFEMNK 308
            +  ++++
Sbjct: 308 SNDLDIDQ 315

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (taxid: 436907)

>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TVP38 PE=3 SV=1

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 15/177 (8%)

Query: 127 AGMIFGYGL-GFVIIMVGTTIGMVLPYWV-GLLFRDRIHQWLKRWPQQAAMLRLAAEGSW 184
           AG+++G    G++II +GT +G +  + V   +FR    + ++   +  A+  +  +   
Sbjct: 138 AGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFEALASILQDH-- 195

Query: 185 LHQFRMVALFRVSPFPYTIFNYAIV-VTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTL 243
            + + ++AL R+ PFPY++ N AI  V  +    +    V    P+ F+Y++ G  ++ L
Sbjct: 196 -NSYWIIALLRLCPFPYSLTNGAIAGVYGISIRNFSIAQVL-TTPKLFMYLFIGSRLKNL 253

Query: 244 ADVKYGNYHMTTVEIVYNIISFIIAV--LTIIAFTVYAKRALKELERGEANGEETST 298
            +        +T   +++I+S + A+  LT  A  +Y K   + LE    N +   T
Sbjct: 254 GESS------STATKLFDILSILFAIIALTATASILYYKTKERYLELQRRNQDRFDT 304

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
225469876	320	PREDICTED: TVP38/TMEM64 family membrane	0.987	1.0	0.750	1e-139
359486227	324	PREDICTED: LOW QUALITY PROTEIN: TVP38/TM	0.987	0.987	0.723	1e-131
255556725	327	conserved hypothetical protein [Ricinus	0.996	0.987	0.716	1e-131
356532936	312	PREDICTED: uncharacterized protein LOC10	0.944	0.980	0.723	1e-128
356564440	320	PREDICTED: Golgi apparatus membrane prot	0.972	0.984	0.706	1e-127
363806994	312	uncharacterized protein LOC100792235 [Gl	0.944	0.980	0.719	1e-127
224112833	323	predicted protein [Populus trichocarpa]	0.947	0.950	0.746	1e-126
388520991	314	unknown [Lotus japonicus]	0.935	0.964	0.697	1e-125
356522101	320	PREDICTED: Golgi apparatus membrane prot	0.953	0.965	0.710	1e-125
124359825	312	F5O11.19, related [Medicago truncatula]	0.947	0.983	0.701	1e-123

>gi|225469876|ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera] gi|297739420|emb|CBI29602.3| unnamed protein product [Vitis vinifera]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/321 (75%), Positives = 273/321 (85%), Gaps = 1/321 (0%)

Query: 1   MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTL 60
           MPNSSEE      NS   V+E+SEYVRLVIS++ R +E D LQP+ ETR KS I W + L
Sbjct: 1   MPNSSEETDKLNTNSGHDVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKAL 60

Query: 61  ALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPS 120
             C++ +I +L+FLKWG PF+FEK+L P+M WEATAFGRPVLA VL+ASLALFPV LIPS
Sbjct: 61  IFCVVNIIFLLVFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 121 GPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAA 180
           GPSMWLAGMIFGYGLGFVIIM+GTTIGMVLPY +GLLFRDRIHQWLKRWPQ+AAM+RLA 
Sbjct: 121 GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHQWLKRWPQKAAMIRLAG 180

Query: 181 EGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLI 240
           EGSW HQFR+VALFRVSPFPYTIFNYAIVVTSM FWPYL GS+AGMVPEAFIYIYSGRLI
Sbjct: 181 EGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYSGRLI 240

Query: 241 RTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTST 300
           RTLADV+YGN H+TT+EI+YNIISFI+A++T +AFT+YAKRAL EL + E NGEE STS 
Sbjct: 241 RTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNEL-KMETNGEEASTSE 299

Query: 301 GSGFEMNKLPLERTKHPTSSS 321
            S FEM KLPLER KH   SS
Sbjct: 300 LSSFEMEKLPLERPKHLGFSS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486227|ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/325 (72%), Positives = 267/325 (82%), Gaps = 5/325 (1%)

Query: 1   MPNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTL 60
           MPNSSEE      NS  +V+E+SEYVRLVIS++ R +E D LQP+ ETR KS I W++ L
Sbjct: 1   MPNSSEETDKLNTNSGHNVREESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKAL 60

Query: 61  ALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPS 120
             C++ VI +LIFLKWG PF+FEK+L P+M WEATAFGRPVLA VL+ASLALFPV LIPS
Sbjct: 61  IFCVVNVIFLLIFLKWGAPFMFEKILLPIMHWEATAFGRPVLAFVLVASLALFPVLLIPS 120

Query: 121 GPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIH----QWLKRWPQQAAML 176
           GPSMWLAGMIFGYGLGFVIIM+GTTIGMVLPY +GLLFRDRIH    +   RW     M+
Sbjct: 121 GPSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLLFRDRIHVSDXELAFRWXXXXXMI 180

Query: 177 RLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYS 236
           RLA EGSW HQFR+VALFRVSPFPYTIFNYAIVVTSM FWPYL GS+AGMVPEAFIYIYS
Sbjct: 181 RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMTFWPYLWGSIAGMVPEAFIYIYS 240

Query: 237 GRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEET 296
           GRLIRTLADV+YGN H+TT+EI+YNIISFI+A++T +AFT+YAKRAL EL + E NGEE 
Sbjct: 241 GRLIRTLADVQYGNQHLTTLEIIYNIISFIVAIITTVAFTIYAKRALNEL-KMETNGEEA 299

Query: 297 STSTGSGFEMNKLPLERTKHPTSSS 321
           STS  S FEM KLPLER KH   SS
Sbjct: 300 STSELSSFEMEKLPLERPKHLGFSS 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556725|ref|XP_002519396.1| conserved hypothetical protein [Ricinus communis] gi|223541463|gb|EEF43013.1| conserved hypothetical protein [Ricinus communis]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/328 (71%), Positives = 271/328 (82%), Gaps = 5/328 (1%)

Query: 1   MPNSSEELGLHGENSVQHVKEDSEYVRLVI---SDDPRPAEGDTLQPEPE-TRTKSLIRW 56
           M   SEE G  G N    V+EDSEYVRLVI   S+   P +   L P+P  + TKS + W
Sbjct: 1   MGEGSEESGKEGANCEGRVREDSEYVRLVIPNASNPGLPQQIHILHPQPNPSSTKSFLWW 60

Query: 57  IRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVF 116
            + LA   L+++++L F KWG+PFLF+KVLFP++QWEATAFGRPVLA+VLIASLA+FP+F
Sbjct: 61  TKALAFSFLVILLLLAFFKWGLPFLFQKVLFPILQWEATAFGRPVLALVLIASLAVFPIF 120

Query: 117 LIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAML 176
           LIPSGPSMWLAGMIFGYG+GFVIIMVGTTIGM+LPY +GLLFRDRIHQWLKRWPQ+AAM+
Sbjct: 121 LIPSGPSMWLAGMIFGYGMGFVIIMVGTTIGMILPYLIGLLFRDRIHQWLKRWPQKAAMI 180

Query: 177 RLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYS 236
           RLA EGSW HQFR+VALFRVSPFPYTIFNYAIVVTSMRFWPYLCGS+AGMVPEAFIYIYS
Sbjct: 181 RLAGEGSWFHQFRVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMVPEAFIYIYS 240

Query: 237 GRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEET 296
           GRLIRT ADVKYGN+H+TTVEI+YN+ISFIIA++T +AFTVYAKRALKELE  E   E  
Sbjct: 241 GRLIRTFADVKYGNHHLTTVEIIYNVISFIIAIITTVAFTVYAKRALKELEGIETTEEVP 300

Query: 297 STSTGSGFEMNKLPLERTKHPTSSSFPL 324
           ++  GS +EM KLPLER      SSF L
Sbjct: 301 ASHQGS-YEMGKLPLERPAQVGLSSFSL 327

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532936|ref|XP_003535025.1| PREDICTED: uncharacterized protein LOC100800730 [Glycine max]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/307 (72%), Positives = 257/307 (83%), Gaps = 1/307 (0%)

Query: 2   PNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLA 61
           P S+E+L  H  +   HV+ +SEYVRL ISD+ R  E + LQP  E+R KS   WI+ L 
Sbjct: 4   PESAEDLEKHAISG-HHVRGNSEYVRLAISDELRVVETEMLQPLAESRMKSFRWWIKALL 62

Query: 62  LCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSG 121
            C ++V++ L+ LKWGVPF FEKVL+P+M+WEATAFGRPVLA+VL+ASLALFPVF IPSG
Sbjct: 63  WCFVIVVLGLVILKWGVPFTFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFFIPSG 122

Query: 122 PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAE 181
           PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPY +GL+FRDRIHQWLKRWP+ AAM+RLA E
Sbjct: 123 PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRLAGE 182

Query: 182 GSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIR 241
           GSW HQF++VALFRVSPFPYTIFNYA+VVT+MRFWPYLCGS+AGMVPEAFIYIYSGRLIR
Sbjct: 183 GSWFHQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSIAGMVPEAFIYIYSGRLIR 242

Query: 242 TLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTG 301
           TLAD +YG + +TTVEI+YNIISFI+AV+T IAFTVYAKR L EL+  EAN E  S S  
Sbjct: 243 TLADAQYGKHQLTTVEIIYNIISFIVAVVTTIAFTVYAKRTLNELKIAEANEEAASVSGS 302

Query: 302 SGFEMNK 308
           S  EM K
Sbjct: 303 SNLEMGK 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564440|ref|XP_003550462.1| PREDICTED: Golgi apparatus membrane protein TVP38-like [Glycine max]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/320 (70%), Positives = 261/320 (81%), Gaps = 5/320 (1%)

Query: 3   NSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLAL 62
            SSE LG H  +S  HV+  SEY+RLVISD+ R  E +TL    E+R KS   W+++   
Sbjct: 5   ESSEVLGKHA-SSGSHVRGSSEYIRLVISDEQRVVEAETLLTRAESRIKSFWWWMKSFLW 63

Query: 63  CILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGP 122
           C++ VI++ I +KWGVP  F KVL+P+M+WEATAFGRPVLA+VL+ASLALFPVFLIPSGP
Sbjct: 64  CVVFVILVFILVKWGVPLFFVKVLYPIMEWEATAFGRPVLALVLVASLALFPVFLIPSGP 123

Query: 123 SMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEG 182
           SMWLAGMIFGYGLGF IIMVGTTIGMVLPY +GLLFRDRIHQWLKRWPQ AAM+RLA EG
Sbjct: 124 SMWLAGMIFGYGLGFFIIMVGTTIGMVLPYLIGLLFRDRIHQWLKRWPQNAAMIRLAGEG 183

Query: 183 SWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRT 242
           +W  QF++VALFRVSPFPYTIFNYA+VVT+MRFWPYLCGSVAGMVPEAFIYIYSGRLI+T
Sbjct: 184 NWSRQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSVAGMVPEAFIYIYSGRLIKT 243

Query: 243 LADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGS 302
           LAD +YG +H+TTVEIVYNIISFIIA++T IAFTVYAKR L +L+  E N E T  S   
Sbjct: 244 LADAQYGKHHLTTVEIVYNIISFIIAIVTTIAFTVYAKRTLNQLKMAELNDEVTFVSV-- 301

Query: 303 GFEMNKLPLERTKHPTSSSF 322
             EM KLPLER K  + S F
Sbjct: 302 --EMEKLPLERPKQLSLSKF 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806994|ref|NP_001242573.1| uncharacterized protein LOC100792235 [Glycine max] gi|255639939|gb|ACU20262.1| unknown [Glycine max]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/307 (71%), Positives = 254/307 (82%), Gaps = 1/307 (0%)

Query: 2   PNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLA 61
           P S EEL  H   S  HV+ +SEYVRL ISD+PR  E + LQP  ++R KS + WI+   
Sbjct: 4   PESLEELEKHA-ISGHHVRGNSEYVRLAISDEPRAVETEMLQPLADSRMKSFMWWIKVFL 62

Query: 62  LCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSG 121
            C ++VI+ L+ LKWGVPF FEKVL+P+M+WEAT FGRPVLA+VL+ASLALFPVF IPSG
Sbjct: 63  WCFIIVILGLVILKWGVPFTFEKVLYPIMEWEATTFGRPVLALVLVASLALFPVFFIPSG 122

Query: 122 PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAE 181
           PSMWLAGMIFGYGLGFVIIM+GTTIGMVLPY +GL+FRDRIHQWLKRWP+ AAM+RLA E
Sbjct: 123 PSMWLAGMIFGYGLGFVIIMIGTTIGMVLPYLIGLIFRDRIHQWLKRWPKNAAMIRLAGE 182

Query: 182 GSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIR 241
           GSW HQF++VALFRVSPFPYT FNYA+VVT+MRFWPYLCGS+AGMVPEAFIYIYSGRLIR
Sbjct: 183 GSWFHQFQVVALFRVSPFPYTTFNYAVVVTNMRFWPYLCGSIAGMVPEAFIYIYSGRLIR 242

Query: 242 TLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTG 301
           TLAD +YG + +TTVEIVYNIISFI+AV+T IAFTVYAKR L EL+  EAN E  S S  
Sbjct: 243 TLADAQYGKHQLTTVEIVYNIISFIVAVVTTIAFTVYAKRTLNELKIAEANQEAASVSES 302

Query: 302 SGFEMNK 308
              EM K
Sbjct: 303 GNLEMEK 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112833|ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1| predicted protein [Populus trichocarpa]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/308 (74%), Positives = 264/308 (85%), Gaps = 1/308 (0%)

Query: 17  QHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLALCILLVIIILIFLKW 76
            +V+EDSEYVRLVISD+PR  + D  Q +   R K+ IRWI+ L  C+++  ++L+FLKW
Sbjct: 17  HNVREDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKALIWCLVIATLVLVFLKW 76

Query: 77  GVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMIFGYGLG 136
           GV FLF+KVL P+M+WEATAFGRPVL++VL ASLALFPVFLIPSGPSMWLAGMIFGYG+G
Sbjct: 77  GVSFLFDKVLLPMMEWEATAFGRPVLSLVLTASLALFPVFLIPSGPSMWLAGMIFGYGIG 136

Query: 137 FVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRV 196
           FVIIMVGTTIGMVLPY +GL+FRDRIHQWLKRWPQ+A+M+RLA EGSW HQF++VA+FRV
Sbjct: 137 FVIIMVGTTIGMVLPYLIGLVFRDRIHQWLKRWPQKASMIRLAGEGSWFHQFKVVAIFRV 196

Query: 197 SPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTV 256
           SPFPYTIFNYAIVVTSMRFWPYL GSV+GMVPEAFIYIYSGRLIRT ADVKYGNYH+TTV
Sbjct: 197 SPFPYTIFNYAIVVTSMRFWPYLWGSVSGMVPEAFIYIYSGRLIRTFADVKYGNYHLTTV 256

Query: 257 EIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEMNKLPLERTKH 316
           EI+YNIISFIIA++T +AFT+YAKRALKELER EA  EE   S     EM KLPLER K 
Sbjct: 257 EIIYNIISFIIAIVTTVAFTIYAKRALKELERAEAT-EEVPPSHQESHEMGKLPLERPKR 315

Query: 317 PTSSSFPL 324
              SSF L
Sbjct: 316 AGLSSFSL 323

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520991|gb|AFK48557.1| unknown [Lotus japonicus]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/314 (69%), Positives = 254/314 (80%), Gaps = 11/314 (3%)

Query: 1   MPNSSEEL------GLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLI 54
           MP SS+E+      G HG       +  SEYVRLVISD+PR  E + +QP  E+R  S  
Sbjct: 3   MPESSKEMEKHATPGHHGRG-----RGSSEYVRLVISDEPRAVETEMIQPREESRINSFR 57

Query: 55  RWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFP 114
            W++ L  C+  V++ L+ LKWGVPF+FEK+L+P M+WEATAFGRP LA+VL+ASLALFP
Sbjct: 58  WWMKVLLWCLASVVLGLVLLKWGVPFVFEKILYPTMEWEATAFGRPALALVLVASLALFP 117

Query: 115 VFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAA 174
           V L PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPY +GLLFRDRIHQWLK+WPQ A 
Sbjct: 118 VILFPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAE 177

Query: 175 MLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYI 234
           M+RLA EGSW HQF+MVALFR+SPFPYTIFNYAIVVT+MRFWPYLCGS+AGMVPEAF+YI
Sbjct: 178 MIRLAGEGSWFHQFQMVALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYI 237

Query: 235 YSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGE 294
           YSGRLIRTLAD +YG +H+TTVEIVYNIISFIIAV+TI+ FTVYAKR L EL+  EAN E
Sbjct: 238 YSGRLIRTLADAQYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEE 297

Query: 295 ETSTSTGSGFEMNK 308
             S S  +  E+ K
Sbjct: 298 AASVSGNASLEIEK 311

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522101|ref|XP_003529688.1| PREDICTED: Golgi apparatus membrane protein TVP38-like [Glycine max]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/314 (71%), Positives = 256/314 (81%), Gaps = 5/314 (1%)

Query: 3   NSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLAL 62
           +SSE L  H  +        SEY+RLVISD+PR  E +TL P  E+R KS   W+++   
Sbjct: 5   DSSEVLEKHASSGSVVRG-SSEYIRLVISDEPRAVEAETLLPRAESRIKSFWWWMKSFLW 63

Query: 63  CILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSGP 122
           C++ V +  I +KWGV   FEKVL+P+M+WEATAFGRPVLA+VL+ASLALFPVFLIPSGP
Sbjct: 64  CVIFVFLAFILVKWGVSLFFEKVLYPIMEWEATAFGRPVLALVLVASLALFPVFLIPSGP 123

Query: 123 SMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEG 182
           SMWLAGMIFGYGLGFVIIMVGTTIGMVLPY +GLLFRDRIHQWLKRWPQ AA++RLA EG
Sbjct: 124 SMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLKRWPQNAALIRLAGEG 183

Query: 183 SWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRT 242
           +W  QF++VALFRVSPFPYTIFNYA+VVT+MRFWPYLCGSVAGMVPEAFIYIYSGRLI+T
Sbjct: 184 NWSRQFQVVALFRVSPFPYTIFNYAVVVTNMRFWPYLCGSVAGMVPEAFIYIYSGRLIKT 243

Query: 243 LADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGS 302
           LAD +YG +H+TTVEIVYNIISFIIA++T IAFTVYAKR L EL+  E N E TS S   
Sbjct: 244 LADAQYGKHHLTTVEIVYNIISFIIAIVTTIAFTVYAKRTLNELKMAELNDEVTSVSV-- 301

Query: 303 GFEMNKLPLERTKH 316
             EM KLPLER K 
Sbjct: 302 --EMEKLPLERPKQ 313

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124359825|gb|ABD32921.2| F5O11.19, related [Medicago truncatula]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/308 (70%), Positives = 252/308 (81%), Gaps = 1/308 (0%)

Query: 2   PNSSEELGLHGENSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTLA 61
           P  S EL    E +  HV+  +EYVRL ISD+PR AE + LQP+ E+R  S   W++   
Sbjct: 4   PEPSRELE-KLEITGHHVRGSTEYVRLAISDEPRVAEAEMLQPQAESRITSFKWWMKVSI 62

Query: 62  LCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLALFPVFLIPSG 121
              ++VI+ L+ +KWGVPF FEKVL+P+M+WEATAFGRPVLA+VLIASLALFPV LIPSG
Sbjct: 63  WGFIIVILSLLLVKWGVPFAFEKVLYPVMEWEATAFGRPVLALVLIASLALFPVLLIPSG 122

Query: 122 PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAE 181
           PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPY +GL FRDRIHQWL++WPQ AAM+RLA E
Sbjct: 123 PSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLKFRDRIHQWLEKWPQNAAMIRLAGE 182

Query: 182 GSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIR 241
           GSW HQF++VALFR SPFPYTIFNYA+VVT M+FWPY CGSVAGMVPEAFIYIYSGRLI+
Sbjct: 183 GSWFHQFQVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYIYSGRLIK 242

Query: 242 TLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTG 301
           +LAD +YG +HMTTVEIVYNIISFIIAV+TI+ FTVYAKR L +L+  EAN E  S S  
Sbjct: 243 SLADAQYGRHHMTTVEIVYNIISFIIAVITIVGFTVYAKRTLNKLKIAEANEEAASVSGN 302

Query: 302 SGFEMNKL 309
           +  EM K+
Sbjct: 303 ASLEMKKV 310

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
TAIR|locus:2056246	320	AT2G02370 "AT2G02370" [Arabido	0.932	0.943	0.641	5.3e-104
TAIR|locus:2132669	296	AT4G22850 "AT4G22850" [Arabido	0.830	0.908	0.390	8.9e-54
TAIR|locus:2034710	303	AT1G12450 "AT1G12450" [Arabido	0.827	0.884	0.383	2.1e-52
TAIR|locus:2118096	306	AT4G12000 [Arabidopsis thalian	0.734	0.777	0.418	7.2e-52
TAIR|locus:2014530	274	AT1G03260 [Arabidopsis thalian	0.669	0.791	0.265	3.7e-16
TAIR|locus:2179654	280	AT5G19070 [Arabidopsis thalian	0.608	0.703	0.276	7.1e-15
TAIR|locus:2017769	344	AT1G22850 "AT1G22850" [Arabido	0.527	0.497	0.261	4.8e-10
GENEDB_PFALCIPARUM|MAL13P1.329	408	MAL13P1.329 "hypothetical prot	0.487	0.387	0.279	2.8e-09
UNIPROTKB|Q8ID52	408	MAL13P1.329 "Uncharacterized p	0.487	0.387	0.279	2.8e-09
UNIPROTKB|Q6YI46	380	TMEM64 "Transmembrane protein	0.589	0.502	0.263	3.2e-09

TAIR|locus:2056246 AT2G02370 "AT2G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
 Identities = 195/304 (64%), Positives = 231/304 (75%)

Query:    14 NSVQHVKEDSEYVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTXXXXXXXXXXXXXX 73
             NS  H++ D+EYVRLV++ +  PAE      + E ++K  + W++               
Sbjct:    14 NSTPHMR-DNEYVRLVVAHEASPAETVLSLSQSEVQSKKFMWWLKALGICAVALLLTLVF 72

Query:    74 XKWGVPFLFEKVLFPLMQWEATAFGRPXXXXXXXXXXXXFPVFLIPSGPSMWLAGMIFGY 133
              KWGVPF+F+KVL P++QWEATAFGRP            FPVFLIPSGPSMWLAGMIFGY
Sbjct:    73 GKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAGMIFGY 132

Query:   134 GLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVAL 193
             GLGFVIIMVGTTIGMVLPY +GL+FRDR+HQWLKRWP+QAA+LRLAAEGSW HQFR+VA+
Sbjct:   133 GLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQFRVVAI 192

Query:   194 FRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHM 253
             FRVSPFPYTIFNYAIVVTSMRFWPY  GS+AGM+PEAFIYIYSGRLIRT ADV+YG+  +
Sbjct:   193 FRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQYGHQRL 252

Query:   254 TTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEM-NKLPLE 312
             TTVEIVYN+IS +IAV+T +AFTVYAKRAL+EL+  EAN +E        FEM N +  E
Sbjct:   253 TTVEIVYNVISLVIAVVTTVAFTVYAKRALRELQNAEANEDEEVQVRKVRFEMKNVVQHE 312

Query:   313 RTKH 316
                H
Sbjct:   313 EDNH 316

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2132669 AT4G22850 "AT4G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 107/274 (39%), Positives = 159/274 (58%)

Query:    19 VKEDSE---YVRLVISDDPRPAEGDTLQPEPETRTKSLIRWIRTXXXXXXXXXXXXXXXK 75
             V++D E   YV+L    + +  E +  + E +T +     W++                 
Sbjct:    17 VEDDDEKGPYVKLSEVLE-KGQESEQEKEEEKTDSSRFWFWVKLSLLFAFLAALAVVGYI 75

Query:    76 WGVPFLFEKVLFPLMQWEATAFGRPXXXXXXXXXXXXFPVFLIPSGPSMWLAGMIFGYGL 135
             W  P + +K L PL+QWE   F  P            FP  L+PS PSMW+AGM FGYG 
Sbjct:    76 WIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILLPSTPSMWIAGMTFGYGY 135

Query:   136 GFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFR 195
             GF++I+    +G+ LPY++G LF  +I  WL+R+P QAA+LR A EG+WLHQF +V L R
Sbjct:   136 GFLLIISAAAVGVSLPYFIGQLFCHKIQGWLERYPDQAAVLRAAGEGNWLHQFLLVTLIR 195

Query:   196 VSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYH-MT 254
             +SPFPY ++NY  V T +++ PY+ GS+ GMVPE F+ IY+G L+RTLA+        ++
Sbjct:   196 ISPFPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGILVRTLAEASSAEEQGLS 255

Query:   255 TVEIVYNIISFIIAVLTIIAFTVYAKRALKELER 288
               +++ NI+ F+  V T I  T YAKR L+ +++
Sbjct:   256 VTQVILNILGFLATVATTILITKYAKRQLETMKK 289

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2034710 AT1G12450 "AT1G12450" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 105/274 (38%), Positives = 156/274 (56%)

Query:    19 VKEDSE---YVRLVISDDPRPAEGDTLQPE--PETRTKSLIRWIRTXXXXXXXXXXXXXX 73
             V+EDS+   Y++L    +    EG + +    P     S+  W++               
Sbjct:    18 VEEDSDNGDYLKLRGGSNEED-EGSSAESSRCPIGSVTSVWFWVKLISLVVCLGSLAFVI 76

Query:    74 XKWGVPFLFEKVLFPLMQWEATAFGRPXXXXXXXXXXXXFPVFLIPSGPSMWLAGMIFGY 133
              KW  PFL EK L P + W    F  P            FP  L+PS PSMW+AG+ FGY
Sbjct:    77 IKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALFPSILLPSSPSMWMAGLTFGY 136

Query:   134 GLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVAL 193
             G GF++I+   +IG+ LP+ +G LF  ++ +WLK++P++AA+LR A EG+W HQF+ V L
Sbjct:   137 GKGFLLILSAASIGVTLPFLIGHLFLHKMQEWLKKYPKKAAILRAAGEGTWFHQFQAVTL 196

Query:   194 FRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHM 253
              RVSPFPY I+NY  + T + + PY+ GS+ GMVPE F+ IY+G ++RTLA      + +
Sbjct:   197 IRVSPFPYIIYNYCALATGVHYGPYILGSLVGMVPEIFVSIYTGIMLRTLAVASDTRHTL 256

Query:   254 TTVEIVYNIISFIIAVLTIIAFTVYAKRALKELE 287
             + VEIV N++ F +     I  T+YAK+ L  ++
Sbjct:   257 SVVEIVVNVLGFCVTASATIVCTIYAKKKLSAMQ 290

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2118096 AT4G12000 [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 100/239 (41%), Positives = 141/239 (58%)

Query:    51 KSLIRWIRTXXXXXXXXXXXXXXXKWGVPFLFEKVLFPLMQWEATAFGRPXXXXXXXXXX 110
             +S+  WI+                KW  P + +K L PL++WE   F  P          
Sbjct:    60 RSVWFWIKLGLFFTFLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFASV 119

Query:   111 XXFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWP 170
               FPV LIP+ PSMW+AG+ FGY  G ++ +    IG+ LPY++  LF ++I  WL+R+P
Sbjct:   120 SLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQGWLERYP 179

Query:   171 QQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEA 230
              QAAMLR A  GSW HQFR V L R+SPFP+ ++NY  V T ++F PY+ GS+ GM PE 
Sbjct:   180 DQAAMLRAAGGGSWFHQFRAVTLIRISPFPFAVYNYCAVATRVKFGPYMAGSLVGMAPEI 239

Query:   231 FIYIYSGRLIRTLADVKYGNYH-MTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELER 288
             F+ IY+G LIRTLAD        ++ ++IV NI  F+  V+T +  T YAKR L+ +++
Sbjct:   240 FVAIYTGILIRTLADASTAEQKGLSILQIVLNIFGFVATVVTTVLITKYAKRQLEVMKK 298

GO:0005886 "plasma membrane" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

TAIR|locus:2014530 AT1G03260 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 61/230 (26%), Positives = 108/230 (46%)

Query:    78 VPFL-FEKVLFPLMQWEATAFGRPXXXXXXXXXXXXFPVFLIPSGPSMWLAGMIFGYGLG 136
             V FL  E+ L   + W     G P              +  +P+       G +FG  +G
Sbjct:    27 VIFLPVEQKLKDFLLWIKEDLG-PFGPLALALAYIPLTIVAVPASVLTLGGGYLFGLPVG 85

Query:   137 FVIIMVGTTIGMVLPYWVG-LLFRDRIHQWLKRWPQ-QAAMLRLAAEGSWLHQFRMVALF 194
             FV   +G T+G    + +G  + +  +   +K +P+ QA  + +   G     F++V L 
Sbjct:    86 FVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSG-----FKIVLLL 140

Query:   195 RVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHM 253
             RV P  P+ + NY + VT +R   Y+  +  GM+P  F  +Y G  ++ L+D+ +G + +
Sbjct:   141 RVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEV 200

Query:   254 TTVEIVYNIISFIIAVLTIIAFTVYAKRAL-KEL-ERG-EANGEETSTST 300
             +    V  ++   +AV+ II  T  AK +L K L E G E +G++   ++
Sbjct:   201 SVFRWVIMMVGVALAVILIICITRVAKSSLDKALAENGTELDGKKNDDAS 250

GO:0005886 "plasma membrane" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2179654 AT5G19070 [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.1e-15, P = 7.1e-15
 Identities = 57/206 (27%), Positives = 96/206 (46%)

Query:    83 EKVLFPLMQWEATAFGRPXXXXXXXXXXXXFPVFLIPSGPSMWLAGMIFGYGLGFVIIMV 142
             EK+L   + W     G P              V  +P+       G +FG  +GFV   V
Sbjct:    31 EKLLKDFLLWVEQDLG-PWGPFALAVAYIPLTVLAVPASVLTLGGGYLFGLPIGFVADSV 89

Query:   143 GTTIGMVLPYWVG-LLFRDRIHQWLKRWPQ-QAAMLRLAAEGSWLHQFRMVALFRVSPF- 199
             G T+G    + +G  + +  +   LK +PQ Q+  L +   G     F++  L R++P  
Sbjct:    90 GATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAIEKSG-----FKICLLLRLAPLL 144

Query:   200 PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIV 259
             P+++ NY + VT +R  PYL  S  GM+P     +Y G  ++ L+DV +     +     
Sbjct:   145 PFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDVTHKWSEFSPGRWA 204

Query:   260 YNIISFIIAVLTIIAFTVYAKRALKE 285
             + I S +I+V+ ++  T  AK AL++
Sbjct:   205 FLISSLVISVILMVCVTKVAKDALRK 230

GO:0005886 "plasma membrane" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2017769 AT1G22850 "AT1G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 4.8e-10, P = 4.8e-10
 Identities = 47/180 (26%), Positives = 93/180 (51%)

Query:   115 VFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLF-RDRIHQWLKRWPQQA 173
             +  IP+ P    AG++FG  +G +I+ +  T+   + + +   F R+RI + ++   +  
Sbjct:   165 ILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFL 224

Query:   174 AMLRLAAEGSWLHQFRMVALFRVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFI 232
             A+ +   E      FR+V L R+SP  P+++ NY   +TS++F PY+ GS  GM+P ++ 
Sbjct:   225 AIDKAIGENG----FRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWA 280

Query:   233 YIYSGRLIRTLADVKYGNYHMT--TVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGE 290
             Y+ +G   R +   +  N  +     +++   +  ++  L     T  AK A+K+++  E
Sbjct:   281 YVSAGAFGRAIIQEE-SNVGLPGGNGQLLTLGVGLLVTALAGTYVTSLAKDAIKDIDDDE 339

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GENEDB_PFALCIPARUM|MAL13P1.329 MAL13P1.329 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 161 (61.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 48/172 (27%), Positives = 92/172 (53%)

Query:   121 GPSMWLAGMIFGYGLG-FVIIM---VGTTIGMVLPYWVG-LLFRDRIHQWLKRWPQQAAM 175
             G  +  +G ++G  LG FV +    VG  +GM L +++   L  + I++ L  +P   A 
Sbjct:   230 GSGLIFSG-VYGKALGIFVAVFSVAVGYVLGMSLCFFISRYLIHNYIYKKLMGYPIYMAF 288

Query:   176 LRLAAEGSWLHQFRMVALFRVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYI 234
              + A   + L     V L R+SP  P ++ +Y + VTS+++  +  GS++ + P  F+++
Sbjct:   289 NQ-AINTNGLS---FVLLIRLSPILPASVVSYILGVTSLKYKHFAIGSISAL-PSIFLFV 343

Query:   235 YSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKEL 286
             Y G L++ ++++     H T + I++  + F+I V+ I+  +V  KR L  L
Sbjct:   344 YIGVLLQDISNLSELENHWTNLIILF--VGFLIGVIAIVYISVITKRRLNNL 393

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q8ID52 MAL13P1.329 "Uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 161 (61.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 48/172 (27%), Positives = 92/172 (53%)

Query:   121 GPSMWLAGMIFGYGLG-FVIIM---VGTTIGMVLPYWVG-LLFRDRIHQWLKRWPQQAAM 175
             G  +  +G ++G  LG FV +    VG  +GM L +++   L  + I++ L  +P   A 
Sbjct:   230 GSGLIFSG-VYGKALGIFVAVFSVAVGYVLGMSLCFFISRYLIHNYIYKKLMGYPIYMAF 288

Query:   176 LRLAAEGSWLHQFRMVALFRVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYI 234
              + A   + L     V L R+SP  P ++ +Y + VTS+++  +  GS++ + P  F+++
Sbjct:   289 NQ-AINTNGLS---FVLLIRLSPILPASVVSYILGVTSLKYKHFAIGSISAL-PSIFLFV 343

Query:   235 YSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKEL 286
             Y G L++ ++++     H T + I++  + F+I V+ I+  +V  KR L  L
Sbjct:   344 YIGVLLQDISNLSELENHWTNLIILF--VGFLIGVIAIVYISVITKRRLNNL 393

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q6YI46 TMEM64 "Transmembrane protein 64" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 55/209 (26%), Positives = 96/209 (45%)

Query:   116 FLIPSGPSMW-------LAGMIFGYGLGFVIIMVGTTIGMVLPYWV-GLLFRDRIHQWLK 167
             F++ S P  W        AG ++G+ LG  ++MVG  IG  + + V   L    +   ++
Sbjct:   167 FIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQ 226

Query:   168 RWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMV 227
                + +A++R+   GS L   ++VAL R++P P+ + N    +T +    YL  S  G++
Sbjct:   227 SSEKLSAVIRVVEGGSGL---KVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLL 283

Query:   228 PEAFIYIYSGRLIRTLADV----KYGNYHMTTVEIVYNI-ISFIIAVLTIIAFTVYAKRA 282
             P   +  Y G  +RT+ DV        Y +  ++I+ +I + F +     +         
Sbjct:   284 PTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVAC 343

Query:   283 LKELERGEANGEETSTSTGSGFEMNKLPL 311
               EL+     G + +TS GS F  NK  L
Sbjct:   344 EMELKSSLVKGNQPNTS-GSSF-YNKRTL 370

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	324
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	6e-16
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	1e-15
COG0586	208	COG0586, DedA, Uncharacterized membrane-associated	2e-06

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 72.7 bits (179), Expect = 6e-16
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 118 IPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQWLKRWPQQAAMLR 177
           +P    +  AG +FG  LGF++ ++G  +G +L Y +G     R  +      +    L+
Sbjct: 1   LPGTVLLIAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRLQ 60

Query: 178 LAAEGSWLHQFRMVALFRVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYS 236
                   + F+ + L R+ P  P  + NY   ++ + F  +L G+  G++P A +Y+Y 
Sbjct: 61  RVERLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILPWALLYVYL 120

Query: 237 GRL 239
           G L
Sbjct: 121 GSL 123

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 19/237 (8%)

Query: 52  SLIRWIRTLALCILLVIIILIFLKWGVPFLFEKVLFPLMQWEATAFGRPVLAIVLIASLA 111
           SL+   R   L  LL + ++I + +    +       L +W   A+G     +  I    
Sbjct: 1   SLLILRRAKLLAALLFLGVIIGIIYLGLLVLLLDPETLREW-IQAYGALGPLVFFILLYL 59

Query: 112 LFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVG-LLFRDRIHQWLKRWP 170
           +  + +IP        G++FG  LGF+  ++G T G  L + +   L RD + +++    
Sbjct: 60  VATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKE 119

Query: 171 Q-QAAMLRLAAEGSWLHQFRMVALFRVSP-FPYTIFNYAIVVTSMRFWPYLCGSVAGMVP 228
           + Q     L   G W      + L R+ P FP+ + NYA  +T + F  +   ++ G +P
Sbjct: 120 KVQRIDAGLERNGFWA-----ILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLP 174

Query: 229 EAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKE 285
              +Y Y G        +  G+  +  V     +   I+ V  I+A     +R  ++
Sbjct: 175 GTIVYTYLGSAF-----LGIGSPLLLLV-----LALLILGVFAIVAKRKELRRHKRK 221

Length = 223

>gnl|CDD|223659 COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 93  EATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMI-----FGYGLGFVIIMVGTTIG 147
           +  + G   + ++L     L     +P    + LAG +         L  ++  +G  +G
Sbjct: 11  QEGSLGYLGVFLILFLESGLLVGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLG 70

Query: 148 MVLPYWVGLLFRDRI--HQWLKRWPQQAAMLRLAAEGSWLHQ--FRMVALFRVSPFPYTI 203
            ++ YW+G  F  ++    W  R  ++    +L        +     + L R  P   T+
Sbjct: 71  DLISYWIGRRFGRKLLRKLWSYRLLKRK---KLDKAELLFERHGLFAIFLGRFIPGVRTL 127

Query: 204 FNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVKYGNYHMTTVEIVYNII 263
                 ++ M    +L  ++ G +  A +    G L+  + DV         V +   ++
Sbjct: 128 VPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVIDVLVHLLL---VLLGILVL 184

Query: 264 SFIIAVLTIIAFTVYAKRALK 284
           + ++ VL +       +R  K
Sbjct: 185 AVLVLVLLLALLWWLRRRKKK 205

Length = 208

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	324
COG0398	223	Uncharacterized conserved protein [Function unknow	99.97
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.84
PRK10847	219	hypothetical protein; Provisional	99.79
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.78
KOG3140	275	consensus Predicted membrane protein [Function unk	99.59
COG1238	161	Predicted membrane protein [Function unknown]	99.27
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	93.88
PRK12821	477	aspartyl/glutamyl-tRNA amidotransferase subunit C-	89.64
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	88.15
TIGR02359	160	thiW thiW protein. Levels of thiamine pyrophosphat	87.92
PRK01844	72	hypothetical protein; Provisional	83.01

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=2.4e-28  Score=223.56  Aligned_cols=152  Identities=23%  Similarity=0.450  Sum_probs=133.8

Q ss_pred             hhhhhHHHHHHHHHhcChhHHHHH-HHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 020593           82 FEKVLFPLMQWEATAFGRPVLAIV-LIASLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLF-R  159 (324)
Q Consensus        82 ~~~~l~~l~~w~~~~~G~p~~~l~-~i~~~~~~~~~~iP~~~l~i~aG~lFG~~~G~l~s~ig~~lGa~l~F~lgR~~-r  159 (324)
                      .....+.+++|+++ .| ++++++ |++.++..++.++|++++++++|++||+++|++++++|+++|++++|+++|++ |
T Consensus        31 ~~~~~~~l~~~i~~-~g-~~~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~gr  108 (223)
T COG0398          31 LLLDPETLREWIQA-YG-ALGPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGR  108 (223)
T ss_pred             hccCHHHHHHHHHH-cC-chHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            34566789999987 46 676766 66667777777899999999999999999999999999999999999999987 8


Q ss_pred             HHHHHHhhhchHHHHHHHHHHcCCchhhHHHHHHHhccc-chhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHHHHHHH
Q 020593          160 DRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRVSP-FPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGR  238 (324)
Q Consensus       160 ~~i~~~l~~~~~~~~l~~l~~~~~~~~g~~~v~l~Rl~P-~P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~~~~G~  238 (324)
                      ++.+++++++++.+++++..+++    |++.++++|++| +|++++||++|++++++++|.++|.+|++|++++|+++|+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~  184 (223)
T COG0398         109 DWVLKFVGGKEKVQRIDAGLERN----GFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGS  184 (223)
T ss_pred             HHHHHHhcccHHHHHHHHHHHhC----ChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence            99998888777766666655554    799999999999 6999999999999999999999999999999999999997


Q ss_pred             h
Q 020593          239 L  239 (324)
Q Consensus       239 ~  239 (324)
                      .
T Consensus       185 ~  185 (223)
T COG0398         185 A  185 (223)
T ss_pred             H
Confidence            3

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.84  E-value=4.4e-20  Score=152.08  Aligned_cols=121  Identities=29%  Similarity=0.520  Sum_probs=103.2

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhchHHHHHHHHHHcCCchhhHHHHHHHhc
Q 020593          118 IPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLFR-DRIHQWLKRWPQQAAMLRLAAEGSWLHQFRMVALFRV  196 (324)
Q Consensus       118 iP~~~l~i~aG~lFG~~~G~l~s~ig~~lGa~l~F~lgR~~r-~~i~~~l~~~~~~~~l~~l~~~~~~~~g~~~v~l~Rl  196 (324)
                      +|++++++++|++||++.|++++.+|+++|+.++|++||+++ +...++..++++.+++++..+ ..++||+..+++.|+
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~l~~~~~   79 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIER-WFQKYGFWVLFLSRF   79 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHH-HHhhhhHHHHHHHHH
Confidence            699999999999999999999999999999999999999884 666666655444444333222 223358999999999


Q ss_pred             cc-chhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHHHHHHHh
Q 020593          197 SP-FPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRL  239 (324)
Q Consensus       197 ~P-~P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~~~~G~~  239 (324)
                      +| +|++++||++|++++++++|++++++|.+|++.+++++|+.
T Consensus        80 ~P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~~  123 (123)
T PF09335_consen   80 IPGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGYL  123 (123)
T ss_pred             HHHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99 59999999999999999999999999999999999999963

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PRK10847 hypothetical protein; Provisional

Probab=99.79  E-value=5.7e-18  Score=154.83  Aligned_cols=149  Identities=16%  Similarity=0.293  Sum_probs=109.5

Q ss_pred             HHHHHHHhcChhHHH-HHHHHHHHh---hccccCChHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020593           89 LMQWEATAFGRPVLA-IVLIASLAL---FPVFLIPSGPSMWLAGMIFG-------YGLGFVIIMVGTTIGMVLPYWVGLL  157 (324)
Q Consensus        89 l~~w~~~~~G~p~~~-l~~i~~~~~---~~~~~iP~~~l~i~aG~lFG-------~~~G~l~s~ig~~lGa~l~F~lgR~  157 (324)
                      +.+++++ +| .++. ++++..+.-   ....++|++.+.+++|++.+       ++..++++++|+++|+.++|++||+
T Consensus        18 ~~~~~~~-~g-~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~   95 (219)
T PRK10847         18 LAELVAQ-YG-VWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRL   95 (219)
T ss_pred             HHHHHHH-hh-HHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566654 56 3432 233333322   22357899999999998875       4466888999999999999999998


Q ss_pred             H-HHHHHHHhhhc---hHHHHHHHHHHcCCchhhHHHHHHHhcccchhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHH
Q 020593          158 F-RDRIHQWLKRW---PQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIY  233 (324)
Q Consensus       158 ~-r~~i~~~l~~~---~~~~~l~~l~~~~~~~~g~~~v~l~Rl~P~P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~  233 (324)
                      + ++.+.++.++.   ++.++.++..++    ||.+.+++.|++|+-++++++++|+++|++++|++.+.+|.++|+.++
T Consensus        96 ~G~~~l~~~~~~~~~~~~l~~~~~~~~r----~G~~~v~i~RfiP~~R~~~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~  171 (219)
T PRK10847         96 FGEKLFSNPNSKIFRRSYLDKTHQFYEK----HGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLF  171 (219)
T ss_pred             hCHHHhhccccccCCHHHHHHHHHHHHH----cCCEEEEeeCCccchHhHHHHHhHhcCCChHHHHHHHHHHHHHHHHHH
Confidence            8 44444322221   112222333222    478899999999976688999999999999999999999999999999


Q ss_pred             HHHHHhhhhh
Q 020593          234 IYSGRLIRTL  243 (324)
Q Consensus       234 ~~~G~~l~~l  243 (324)
                      +++|..+++.
T Consensus       172 ~~~Gy~~g~~  181 (219)
T PRK10847        172 TYAGYFFGTL  181 (219)
T ss_pred             HHHHHHHcCC
Confidence            9999998864

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.78  E-value=3.7e-17  Score=148.41  Aligned_cols=131  Identities=18%  Similarity=0.218  Sum_probs=106.3

Q ss_pred             ccccCChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhc-hHHHHHHHHHHcCCchh
Q 020593          114 PVFLIPSGPSMWLAGMIFG-----YGLGFVIIMVGTTIGMVLPYWVGLLFR-DRIHQWLKRW-PQQAAMLRLAAEGSWLH  186 (324)
Q Consensus       114 ~~~~iP~~~l~i~aG~lFG-----~~~G~l~s~ig~~lGa~l~F~lgR~~r-~~i~~~l~~~-~~~~~l~~l~~~~~~~~  186 (324)
                      ...++|++++++++|++-+     ++..++.+++|+++|+.+.|++||+++ +.+.++.++. .+.+.+++. ++...+|
T Consensus        32 ~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~~~~~l~~a-~~~f~r~  110 (208)
T COG0586          32 VGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLLKRKKLDKA-ELLFERH  110 (208)
T ss_pred             cCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccCCHHHHHHH-HHHHHHc
Confidence            4568999999999999865     567788899999999999999999984 5555544421 122223332 2222236


Q ss_pred             hHHHHHHHhcccchhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHHHHHHHhhhhhhh
Q 020593          187 QFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLAD  245 (324)
Q Consensus       187 g~~~v~l~Rl~P~P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~~~~G~~l~~l~~  245 (324)
                      |.+.+++.|++|.-++++++.+|+++||+++|.+.+++|.+.|..++++.|..+++..+
T Consensus       111 G~~~vf~~RFip~vRt~ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~~~~  169 (208)
T COG0586         111 GLFAIFLGRFIPGVRTLVPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVID  169 (208)
T ss_pred             CchhhhhhcccchhHhhhhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence            89999999999998999999999999999999999999999999999999999987654

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.59  E-value=8.1e-15  Score=137.54  Aligned_cols=143  Identities=22%  Similarity=0.397  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHhhccccCChHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhchHHHHHHHHH
Q 020593          102 LAIVLIASLALFPVFLIPSGPS-MWLAGMIFGYGLGFVIIMVGTTIGMVLPYWVGLLF-RDRIHQWLKRWPQQAAMLRLA  179 (324)
Q Consensus       102 ~~l~~i~~~~~~~~~~iP~~~l-~i~aG~lFG~~~G~l~s~ig~~lGa~l~F~lgR~~-r~~i~~~l~~~~~~~~l~~l~  179 (324)
                      ..+.|++.|+....+.+||..+ .+.+|++||.+.|++++...+++|+++||++++.+ |.++.+++..+.+.-+.+ ..
T Consensus        96 ~~~~~~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~p~~~~~~~~~-~~  174 (275)
T KOG3140|consen   96 VLLGFIAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLFPDKIAFLQQD-VE  174 (275)
T ss_pred             HHHHHHHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHhHHHHHHHHHH-HH
Confidence            4466788898888899998776 69999999999999999999999999999999988 888888776543332222 22


Q ss_pred             HcCCchhhHHHHHHHhcccc-hhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHHHHHHHhhhhhhhhc
Q 020593          180 AEGSWLHQFRMVALFRVSPF-PYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIRTLADVK  247 (324)
Q Consensus       180 ~~~~~~~g~~~v~l~Rl~P~-P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~~~~G~~l~~l~~~~  247 (324)
                      .+.+  +-+..+.+.|++|+ |.++.|+++++.++++..|++++++|++|..++++-.|+.++++.+.+
T Consensus       175 ~~~~--~~~~~~~~lrlsp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl~p~s~i~v~ags~l~~l~s~~  241 (275)
T KOG3140|consen  175 LNRN--SLLNYMLFLRLSPFLPNWVINIVSPVLGVPLRIFFIGTFKGLIPYSFIEVRAGSTLASLTSAS  241 (275)
T ss_pred             hccc--chhhhhhhhhhccCCHHHHHHHHHHhhccchHHHHHHHHHhcCchHHHHhhccchHhhhcccc
Confidence            2222  13778999999996 999999999999999999999999999999999999999998876544

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.27  E-value=1.8e-10  Score=100.53  Aligned_cols=147  Identities=12%  Similarity=0.145  Sum_probs=105.1

Q ss_pred             HHHHHHHhcChhHHHHHHHHHHHhhccccCChHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Q 020593           89 LMQWEATAFGRPVLAIVLIASLALFPVFLIPSGPSMWLAGMI-FGYGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQW-L  166 (324)
Q Consensus        89 l~~w~~~~~G~p~~~l~~i~~~~~~~~~~iP~~~l~i~aG~l-FG~~~G~l~s~ig~~lGa~l~F~lgR~~r~~i~~~-l  166 (324)
                      ..+|..+.+++.   .+|+..++-.+++|+|.+++.+..-.. ..++.-.+++.+|+++|++++|++||+..+.+.+. .
T Consensus         9 ~~~~~~~~~a~~---~Lf~vaF~eat~lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~   85 (161)
T COG1238           9 TLSLMSQAYAYA---GLFIVAFLEATLLPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWF   85 (161)
T ss_pred             HHHHHHHHHHHH---HHHHHHHHHHHhcCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhh
Confidence            344444433322   345556666677889999874322221 56777888999999999999999999986665553 2


Q ss_pred             hhchHHHHHHHHHHcCCchhhHHHHHHHhcccchhhHHHHHHHhcCCCchhHHHHHHHhhHHHHHHHHHHHHhhh
Q 020593          167 KRWPQQAAMLRLAAEGSWLHQFRMVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSVAGMVPEAFIYIYSGRLIR  241 (324)
Q Consensus       167 ~~~~~~~~l~~l~~~~~~~~g~~~v~l~Rl~P~P~~lvny~aG~t~i~~~~F~las~iG~lP~~~l~~~~G~~l~  241 (324)
                      ..  +.+..++..++...++|.+.+++.=+.|+| ++++.++|..++++++|++..++|.....++.+++.....
T Consensus        86 ~~--~~~~~~~~~~~~~~ryg~~~ll~s~lp~ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~~~~  157 (161)
T COG1238          86 PG--SEEALEKLQEKWYRRYGVWTLLLSWLPPIG-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTLLGG  157 (161)
T ss_pred             cc--hHHHHHHHHHHHHHHHHHHHHHHHhccccc-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            21  112223332222233588999999999999 9999999999999999999999999999988888766543

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=93.88  E-value=1.4  Score=36.77  Aligned_cols=96  Identities=14%  Similarity=0.104  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhchHHHHHHHH--HHcCCchhhHHHHHHHhcccch---hhHHH
Q 020593          133 YGLGFVIIMVGTTIGMVLPYWVGLLFRDRIHQ--WLKRWPQQAAMLRL--AAEGSWLHQFRMVALFRVSPFP---YTIFN  205 (324)
Q Consensus       133 ~~~G~l~s~ig~~lGa~l~F~lgR~~r~~i~~--~l~~~~~~~~l~~l--~~~~~~~~g~~~v~l~Rl~P~P---~~lvn  205 (324)
                      ++..++++.+|+++...+.+++-++..+++.+  ++++..+. ..++.  .++.-.++|+.-+++.=.+|+|   -+.-+
T Consensus        16 p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~-~~~k~~~~~~~i~kyg~~GL~lFVaIPlP~TG~wtga   94 (121)
T PF06695_consen   16 PWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEW-LEKKAEKKSKKIEKYGFWGLALFVAIPLPGTGAWTGA   94 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHHhCCCCcchHHHHH
Confidence            56778888888888777766666544333222  11111000 00011  1111112467777777777887   35667


Q ss_pred             HHHHhcCCCchhHHHHHHHhhHHH
Q 020593          206 YAIVVTSMRFWPYLCGSVAGMVPE  229 (324)
Q Consensus       206 y~aG~t~i~~~~F~las~iG~lP~  229 (324)
                      .++-+.+++.++=+++..+|.+-.
T Consensus        95 l~a~llg~~~~~~~~ai~~Gv~ia  118 (121)
T PF06695_consen   95 LIASLLGMDKKKAFLAIFLGVLIA  118 (121)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHH
Confidence            777789999999999988887643

>PRK12821 aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein; Provisional

Probab=89.64  E-value=8.3  Score=39.16  Aligned_cols=26  Identities=15%  Similarity=0.229  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020593          122 PSMWLAGMIFGYGLGFVIIMVGTTIG  147 (324)
Q Consensus       122 ~l~i~aG~lFG~~~G~l~s~ig~~lG  147 (324)
                      +.+.++|++|||++|.+...++-.+|
T Consensus       100 Ipi~l~G~LFGP~~G~l~g~lsDlLg  125 (477)
T PRK12821        100 ILVKISGLLFGPIIGIFSAATIDFLT  125 (477)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            44688999999999999988888888

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=88.15  E-value=0.76  Score=38.55  Aligned_cols=62  Identities=15%  Similarity=0.292  Sum_probs=23.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhccccccCCCCcccccccCCCCCCC
Q 020593          252 HMTTVEIVYNIISFIIAVLTIIAFTVYAKRALKELERGEANGEETSTSTGSGFEMNKLPLERTK  315 (324)
Q Consensus       252 ~~s~~~~~~~~ig~v~~vv~~~~l~~~~kr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (324)
                      .++...++..++|.++++++++++..|.-|+++|-...+.+-  .+..+..|.-+..|+.|-|+
T Consensus        60 ~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~~~~~~p--~P~~~d~~~p~~~~~~~~~~  121 (122)
T PF01102_consen   60 RFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKSSSDVQP--LPEEDDTDVPLSSVEIENPE  121 (122)
T ss_dssp             SSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS-------------------------------
T ss_pred             CccccceeehhHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC--CCCCCCCCCCcceeeecCCC
Confidence            345556777888888888888888777754443332222111  12222344445556666665

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>TIGR02359 thiW thiW protein

Probab=87.92  E-value=15  Score=32.18  Aligned_cols=33  Identities=12%  Similarity=0.101  Sum_probs=27.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020593          119 PSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLP  151 (324)
Q Consensus       119 P~~~l~i~aG~lFG~~~G~l~s~ig~~lGa~l~  151 (324)
                      ++...++++|++||+|+|.+...+++.++....
T Consensus        33 ~~~i~~vlaavllGP~~g~~~a~i~~ll~~l~~   65 (160)
T TIGR02359        33 VQHFVNVIAGVLLGPWYALAVAFIIGLLRNTLG   65 (160)
T ss_pred             hhHHHHHHHHHHHchHHHHHHHHHHHHHHHHhC
Confidence            356668999999999999999888888877654

Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved,to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.

>PRK01844 hypothetical protein; Provisional

Probab=83.01  E-value=3.5  Score=31.38  Aligned_cols=25  Identities=20%  Similarity=0.393  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020593          133 YGLGFVIIMVGTTIGMVLPYWVGLL  157 (324)
Q Consensus       133 ~~~G~l~s~ig~~lGa~l~F~lgR~  157 (324)
                      .|..+++.+++..+|..++|+++|+
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark   27 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARK   27 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556677888999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00