Citrus Sinensis ID: 020610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
Protein Sequence
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILGNR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccEEEEccccccHcccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccEEEEEccccccc
Coil and Loop (DISEMBL)
MMASRVLSRATRCVGRRAlllvptsgkqhspalsnqFHSLVfespnkltqvsLFHQTTlnssifqrfgfssaspepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegmeatdrtkesgfdskpqstvsqsnkrrrrvskqtafsdsdsdseseiELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLgrassvvkenflkidpsndtagaVPLLKSLLEGVEMTEKQLGEVkfyycfpshvsaslppehlyepgcygsmfnhlilgnr
Flexible Loop (DISEMBL)
mmasrvlsratrcvgrRALLLvptsgkqhspALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASpepnekeqgsapdnngaespkpnrdakdsvdnngaeapkpngdakasdegMEATdrtkesgfdskpqstvsqsnkrrrrvskqtafsdsdsdseseielsrdDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEnflkidpsndtagAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILGNR
Low Complexity Region (SEG)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFsdsdsdseseielsrddlvkllkereellmakNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILGNR
Disordered region (IsUnstruct)
**********TRCVGRRALLLVP*************FHSLVFESPNKLTQVSLFHQTTLNSSIFQRFG************************************************************************************************************************************************************KFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL***
Disordered Region (DISOPRED)
*******SRATRCVGR******************NQFHSLVFESPNKLTQVSLFHQTTLNSSIFQ****************************************************************************************************************************A*NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE**************VPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMF*HL*****
Disordered Region (DISEMBL)
*********ATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFS********************************VDNNGA***************************************************************LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILGNR
Disordered Region (DISPRO)
*****V*******VGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGF******************************************************************************************************LSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMASRVLSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTLNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDxxxxxxxxxxxxxxxxxxxxxxxxxVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILGNR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	323	2.2.26 [Sep-21-2011]
Q3SW78	197	Protein GrpE OS=Nitrobact	yes	no	0.281	0.461	0.393	2e-13
A6WVA7	228	Protein GrpE OS=Ochrobact	yes	no	0.356	0.504	0.360	3e-13
A5VNA6	230	Protein GrpE OS=Brucella	yes	no	0.356	0.5	0.368	5e-13
Q8YEV0	226	Protein GrpE OS=Brucella	yes	no	0.356	0.508	0.368	5e-13
B0CJ30	230	Protein GrpE OS=Brucella	yes	no	0.356	0.5	0.368	5e-13
Q8G2Y6	230	Protein GrpE OS=Brucella	yes	no	0.356	0.5	0.368	5e-13
A9M7B6	230	Protein GrpE OS=Brucella	yes	no	0.356	0.5	0.368	5e-13
Q6NCY6	207	Protein GrpE OS=Rhodopseu	yes	no	0.253	0.396	0.422	1e-12
B3Q970	207	Protein GrpE OS=Rhodopseu	yes	no	0.253	0.396	0.422	2e-12
A4YJR1	206	Protein GrpE OS=Bradyrhiz	yes	no	0.238	0.373	0.458	2e-12

>sp|Q3SW78|GRPE_NITWN Protein GrpE OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=grpE PE=3 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 8/99 (8%)

Query: 185 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 244
           ++ L A N+++ + +D+ LR+ AEMEN++ RT RE  +++ + I  FA+ +L++ADNL R
Sbjct: 34  DDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQR 93

Query: 245 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
           A   V        P++  A   P LK+L+EGVE+TE+ L
Sbjct: 94  ALDAV--------PADARAAPDPGLKALIEGVELTERSL 124

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) (taxid: 323098)

>sp|A6WVA7|GRPE_OCHA4 Protein GrpE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=grpE PE=3 SV=1

 Score = 76.6 bits (187), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR+ AEMEN++ RT R+ ++++ +A+ NFA+ +L V+DNL 
Sbjct: 61  RIAMLEADNGELK---DQLLRAAAEMENLRKRTQRDVQDARTYAVTNFARDMLSVSDNLR 117

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L  D S         LKSL +GVEMTE+ +           H    L PE
Sbjct: 118 RALDAIPADALATDAS---------LKSLADGVEMTERAM-----LQALERHGVKKLEPE 163

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 164 GEKFDPNFHQAMF 176

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) (taxid: 439375)

>sp|A5VNA6|GRPE_BRUO2 Protein GrpE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=grpE PE=3 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR  AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL 
Sbjct: 61  RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L+ D +         LKSL EGVEMTE+ +           H    L PE
Sbjct: 118 RALDTIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 164 GQKFDPNFHQAMF 176

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) (taxid: 444178)

>sp|Q8YEV0|GRPE_BRUME Protein GrpE OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=grpE PE=3 SV=2

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR  AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL 
Sbjct: 57  RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 113

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L+ D +         LKSL EGVEMTE+ +           H    L PE
Sbjct: 114 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 159

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 160 GQKFDPNFHQAMF 172

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) (taxid: 224914)

>sp|B0CJ30|GRPE_BRUSI Protein GrpE OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=grpE PE=3 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR  AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL 
Sbjct: 61  RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L+ D +         LKSL EGVEMTE+ +           H    L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 164 GQKFDPNFHQAMF 176

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Brucella suis (strain ATCC 23445 / NCTC 10510) (taxid: 470137)

>sp|Q8G2Y6|GRPE_BRUSU Protein GrpE OS=Brucella suis biovar 1 (strain 1330) GN=grpE PE=3 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR  AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL 
Sbjct: 61  RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L+ D +         LKSL EGVEMTE+ +           H    L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 164 GQKFDPNFHQAMF 176

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Brucella suis biovar 1 (strain 1330) (taxid: 204722)

>sp|A9M7B6|GRPE_BRUC2 Protein GrpE OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=grpE PE=3 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 18/133 (13%)

Query: 184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLG 243
           R  +L A N E+K   D++LR  AEMEN++ RT R+ ++++ +AI NFA+ +L V+DNL 
Sbjct: 61  RIAVLEADNTELK---DQMLRVAAEMENLRKRTQRDVQDARAYAITNFARDMLSVSDNLR 117

Query: 244 RASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE 303
           RA   +  + L+ D +         LKSL EGVEMTE+ +           H    L PE
Sbjct: 118 RALDAIPADALEADSN---------LKSLSEGVEMTERAM-----LLALERHGVKKLEPE 163

Query: 304 -HLYEPGCYGSMF 315
              ++P  + +MF
Sbjct: 164 GQKFDPNFHQAMF 176

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Brucella canis (strain ATCC 23365 / NCTC 10854) (taxid: 483179)

>sp|Q6NCY6|GRPE_RHOPA Protein GrpE OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=grpE PE=3 SV=2

 Score = 74.3 bits (181), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 8/90 (8%)

Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
               P++  A A P LK+L+EGVE+TE+ L
Sbjct: 100 ----PADARANAEPGLKALIEGVELTERSL 125

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (taxid: 258594)

>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE PE=3 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 8/90 (8%)

Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
           E    +DK+LR+ AEMEN++ RT +E  +++ + + +FA+ +LD+ADNL RA   V    
Sbjct: 44  EAADARDKMLRTLAEMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAV---- 99

Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
               P+   A A P LK+L+EGVE+TE+ L
Sbjct: 100 ----PAEARANAEPGLKALIEGVELTERSL 125

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

>sp|A4YJR1|GRPE_BRASO Protein GrpE OS=Bradyrhizobium sp. (strain ORS278) GN=grpE PE=3 SV=1

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 8/85 (9%)

Query: 199 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 258
           +DK+LR+ AEMEN++ RT RE  +++ + I  FA+ +LD+ADNL RA   V        P
Sbjct: 48  RDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--------P 99

Query: 259 SNDTAGAVPLLKSLLEGVEMTEKQL 283
           +   A A   LKSL+EGVE+TE+ L
Sbjct: 100 AETRANADAGLKSLIEGVELTERSL 124

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Bradyrhizobium sp. (strain ORS278) (taxid: 114615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
255580752	308	Protein grpE, putative [Ricinus communis	0.721	0.756	0.537	8e-66
147811306	413	hypothetical protein VITISV_018795 [Viti	0.752	0.588	0.574	1e-62
224133294	265	predicted protein [Populus trichocarpa]	0.674	0.822	0.561	4e-61
359494074	298	PREDICTED: protein grpE-like [Vitis vini	0.687	0.744	0.506	6e-57
224116576	244	predicted protein [Populus trichocarpa]	0.625	0.827	0.526	2e-53
3851640	304	chaperone GrpE type 2 [Nicotiana tabacum	0.764	0.812	0.455	2e-53
359806326	290	uncharacterized protein LOC100812682 [Gl	0.674	0.751	0.465	6e-51
18416821	327	molecular chaperone GrpE [Arabidopsis th	0.773	0.764	0.487	4e-49
413921990	332	hypothetical protein ZEAMMB73_702360 [Ze	0.616	0.599	0.508	9e-48
356527097	289	PREDICTED: protein grpE-like [Glycine ma	0.687	0.768	0.442	1e-47

>gi|255580752|ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi|223529199|gb|EEF31174.1| Protein grpE, putative [Ricinus communis]

 Score =  256 bits (655), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/290 (53%), Positives = 185/290 (63%), Gaps = 57/290 (19%)

Query: 1   MMASRV-LSRATRCVGRRALLLVPTSGKQHSPALSNQFHSLVFESPNKLT--QVSLFHQT 57
           M+ SRV LSRA+R VGRR+LLL+  S KQ  P  SNQ  SLV  + N+    QVSLFH +
Sbjct: 1   MLISRVVLSRASRSVGRRSLLLLSPSQKQQLPIFSNQIESLVHVNSNQFVAGQVSLFHHS 60

Query: 58  TLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGD 116
             +SS FQRFGF SSASPE NEKE GS  +NN               D+   E    NGD
Sbjct: 61  AFSSSPFQRFGFTSSASPEANEKE-GSTAENNA--------------DSTNVEPETSNGD 105

Query: 117 AKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDD 176
            K S+E  E                                       DS++E +LS DD
Sbjct: 106 TKPSNETREP--------------------------------------DSDTEGDLSMDD 127

Query: 177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALL 236
           LVKL+ E+EELL  K++E+++MQDKVLR++AEMENV +RT REAENS+KFAIQNFAK LL
Sbjct: 128 LVKLVAEKEELLKLKHKEIEKMQDKVLRTYAEMENVMERTKREAENSRKFAIQNFAKGLL 187

Query: 237 DVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           DVADNLGRASSVVK+++ KID S DTAGAVPLLK+LLEGVEMTEKQL EV
Sbjct: 188 DVADNLGRASSVVKDSYSKIDTSTDTAGAVPLLKTLLEGVEMTEKQLAEV 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811306|emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/287 (57%), Positives = 201/287 (70%), Gaps = 44/287 (15%)

Query: 6   VLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKL--TQVSLFHQTTLN 60
           VL R+TR +   GR + LL P S         N F  L+ ES +K+  TQVSL H    N
Sbjct: 95  VLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLHHLVHN 145

Query: 61  SSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKA 119
           +SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A     DA+ 
Sbjct: 146 ASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPA-----DAEP 188

Query: 120 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 179
           +      T++ +ESG++SKPQS   +S KRRRR +K+TAFSDSDS    E +LS DDL+K
Sbjct: 189 AK-----TNQAEESGYNSKPQS---ESVKRRRRGTKRTAFSDSDS----EADLSMDDLMK 236

Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
           L+ E+EELL  KN+E+++MQDKVLRS+AEMENV +R  REAENSKKFAIQNFAK+LLDVA
Sbjct: 237 LVVEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKSLLDVA 296

Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           DNLGRAS VVKE+F KID S DTAGAVPLLK+LLEGVEMTEKQLGEV
Sbjct: 297 DNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTEKQLGEV 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133294|ref|XP_002321532.1| predicted protein [Populus trichocarpa] gi|222868528|gb|EEF05659.1| predicted protein [Populus trichocarpa]

 Score =  241 bits (614), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/260 (56%), Positives = 177/260 (68%), Gaps = 42/260 (16%)

Query: 57  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNG 115
           + LNS  FQ FGF SSASPEP EKEQG+  D             +DSV            
Sbjct: 1   SALNSPPFQNFGFTSSASPEPTEKEQGNLSDK-----------TEDSV------------ 37

Query: 116 DAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRD 175
                         TKESGF+S+ Q T+S+S KRRR V+K+TA+SDSDS++ S+  LS D
Sbjct: 38  -----------LHETKESGFNSESQQTISRSGKRRR-VTKRTAYSDSDSEAGSD--LSMD 83

Query: 176 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 235
           DLVKL+ E+EELL AK++E++ +QDKVLR++AEMENVK+RT REAENSKKFAIQNFAK+L
Sbjct: 84  DLVKLVAEKEELLEAKHKEIETIQDKVLRAYAEMENVKERTKREAENSKKFAIQNFAKSL 143

Query: 236 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSH 295
           LDVADNLGRASSVVK NF KID SNDTA  VPLLK+LLEGVEMTEKQLGEV   Y     
Sbjct: 144 LDVADNLGRASSVVKGNFSKIDVSNDTAQVVPLLKTLLEGVEMTEKQLGEVFKKYG---- 199

Query: 296 VSASLPPEHLYEPGCYGSMF 315
           +    P    ++P  + ++F
Sbjct: 200 IEKFDPTNEPFDPHRHNAIF 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494074|ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera] gi|297737494|emb|CBI26695.3| unnamed protein product [Vitis vinifera]

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/292 (50%), Positives = 179/292 (61%), Gaps = 70/292 (23%)

Query: 1   MMASRVLSRATRCV---GRRALLLVPTSGKQHSPALSNQFHSLVFESPNKL--TQVSLFH 55
           M ASRVL R+TR +   GR + LL P S         N F  L+ ES +K+  TQVSL H
Sbjct: 1   MFASRVLFRSTRTLLAQGRTSSLLAPQSHL-------NTF--LIGESTDKVVATQVSLLH 51

Query: 56  QTTLNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPN 114
               N+SIFQRFG SS ASP+ NEKE   + +  G            +V+N+GA A    
Sbjct: 52  HLVHNASIFQRFGISSSASPQTNEKETTQSGNEQG------------TVENDGAPA---- 95

Query: 115 GDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSR 174
                                D++P  T                  +   +S+SE +LS 
Sbjct: 96  ---------------------DAEPAKT------------------NQAEESDSEADLSM 116

Query: 175 DDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA 234
           DDL+KL+ E+EELL  KN+E+++MQDKVLRS+AEMENV +R  REAENSKKFAIQNFAK+
Sbjct: 117 DDLMKLVLEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARREAENSKKFAIQNFAKS 176

Query: 235 LLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           LLDVADNLGRAS VVKE+F KID S DTAGAVPLLK+LLEGVEMTEKQLGEV
Sbjct: 177 LLDVADNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTEKQLGEV 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116576|ref|XP_002317335.1| predicted protein [Populus trichocarpa] gi|222860400|gb|EEE97947.1| predicted protein [Populus trichocarpa]

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/260 (52%), Positives = 164/260 (63%), Gaps = 58/260 (22%)

Query: 57  TTLNSSIFQRFGF-SSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNG 115
           + LNSS+FQ FGF SSASPEP EKE GSA +N+GA +     D K S + NG+       
Sbjct: 1   SALNSSLFQNFGFTSSASPEPGEKEHGSAVENDGAPT-----DVK-SEETNGS------- 47

Query: 116 DAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRD 175
                                                  K+TAFSDSD+++ S+  LS D
Sbjct: 48  --------------------------------------IKRTAFSDSDAEAVSD--LSMD 67

Query: 176 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 235
           DLVKL+ E+EELL  K++EM+ MQDKVLR++AEMENVK+RT REAENSKKFAIQNFAK+L
Sbjct: 68  DLVKLVMEKEELLKEKHKEMETMQDKVLRTYAEMENVKERTKREAENSKKFAIQNFAKSL 127

Query: 236 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSH 295
           LDVADNLGRASSVVK NF KI+ SND A  VPLLK+LLEGVEMTEKQLGEV   Y     
Sbjct: 128 LDVADNLGRASSVVKGNFSKINVSNDAADVVPLLKTLLEGVEMTEKQLGEVFKKYG---- 183

Query: 296 VSASLPPEHLYEPGCYGSMF 315
           V    P    ++P  + +MF
Sbjct: 184 VEKFDPINEPFDPHRHNAMF 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3851640|gb|AAC72387.1| chaperone GrpE type 2 [Nicotiana tabacum]

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 183/323 (56%), Gaps = 76/323 (23%)

Query: 1   MMASRVLSRATRCV---GRRALLLVP--TSGKQHSPALSNQFHSLVFESPNKLTQVSLFH 55
           M  SR+ SR  R +    R ++LL       +QH P L+ QFHSL     +   +VSLFH
Sbjct: 1   MSVSRISSRFRRAILNQCRSSVLLYSREQQRQQHVPVLAFQFHSL----RDFKEKVSLFH 56

Query: 56  QTTLNSSIFQRFGFSS-ASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPN 114
           ++ L     QRFG SS ASP+PNEKE   +    G+                     K N
Sbjct: 57  ESAL-----QRFGISSSASPQPNEKESSQSQSEPGS--------------------TKEN 91

Query: 115 GDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSR 174
           GD +AS                                VS  +   D   +S++E +LSR
Sbjct: 92  GDCEAS--------------------------------VSADSHVQDEKDESDTE-DLSR 118

Query: 175 DDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA 234
           DDLVKL+ E+EELL  K+ E ++MQDKVLR++AEMENV +RT REAENSKKFAIQNF KA
Sbjct: 119 DDLVKLVAEKEELLKMKDGEFQKMQDKVLRTYAEMENVMNRTKREAENSKKFAIQNFVKA 178

Query: 235 LLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV--KFYYCF 292
           LLDV+DNLGRASSVVKE+F KID S DTAGAVPLLK+LLEGVEMT+KQL EV  KF    
Sbjct: 179 LLDVSDNLGRASSVVKESFSKIDESKDTAGAVPLLKTLLEGVEMTDKQLAEVFKKF---- 234

Query: 293 PSHVSASLPPEHLYEPGCYGSMF 315
              V    P    ++P  + ++F
Sbjct: 235 --GVGKYDPTNEQFDPNKHNAIF 255

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806326|ref|NP_001240970.1| uncharacterized protein LOC100812682 [Glycine max] gi|255638729|gb|ACU19669.1| unknown [Glycine max]

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/288 (46%), Positives = 165/288 (57%), Gaps = 70/288 (24%)

Query: 1   MMASRVLSRATRCVGRR-ALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTT- 58
           M A RVLSR++  + R   L  V  + +  S  LSN FHSL+  SPNKL  V    QT  
Sbjct: 1   MFAYRVLSRSSAILSRSFTLFSVSRNSQPFSTTLSNNFHSLLHPSPNKLIPV----QTNF 56

Query: 59  LNSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAK 118
           LNSS+  RFGFSS +   +  E+    D +                              
Sbjct: 57  LNSSLTSRFGFSSTASHEHASEEAKVSDQS------------------------------ 86

Query: 119 ASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLV 178
              E  EA D+TKES                               D ESE +LSRDDL+
Sbjct: 87  ---EQAEAADQTKES-------------------------------DVESECDLSRDDLI 112

Query: 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDV 238
           KL+ E+E+LL  K++E+++MQDKVLR++AEMENV DRT REAENSKKFAIQNFAK+LLDV
Sbjct: 113 KLVAEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDV 172

Query: 239 ADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           ADNLGRASSVVK+NF KI+   +++ A  LLK+LLEGVEMTEKQL EV
Sbjct: 173 ADNLGRASSVVKDNFSKIESPEESSEAAQLLKTLLEGVEMTEKQLAEV 220

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416821|ref|NP_567757.1| molecular chaperone GrpE [Arabidopsis thaliana] gi|21593024|gb|AAM64973.1| grpE like protein [Arabidopsis thaliana] gi|26451456|dbj|BAC42827.1| putative grpE protein [Arabidopsis thaliana] gi|29824143|gb|AAP04032.1| putative grpE protein [Arabidopsis thaliana] gi|332659851|gb|AEE85251.1| molecular chaperone GrpE [Arabidopsis thaliana]

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/289 (48%), Positives = 185/289 (64%), Gaps = 39/289 (13%)

Query: 1   MMASRVLSRATRCVG-RRALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTL 59
           M+  R+LSR TR  G R +L  V    +  +P  S++FHSL  +  +KL    +   + +
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQM---SMM 57

Query: 60  NSSIFQRFGFSSA-SPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAK 118
           +S   QRF FSS+ SPE +EK+  +       E P              AEA +P     
Sbjct: 58  DSFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPT-------------AEANQP----- 99

Query: 119 ASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIE-LSRDDL 177
                          G DS+ + +V+ S KR+R+ +K  A S S+SDSES+ + LS DDL
Sbjct: 100 ---------------GLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSADDL 144

Query: 178 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLD 237
           VKL+ E+EELL  K EE+KQ++DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+LLD
Sbjct: 145 VKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLD 204

Query: 238 VADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           VADNLGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EV
Sbjct: 205 VADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEV 253

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413921990|gb|AFW61922.1| hypothetical protein ZEAMMB73_702360 [Zea mays]

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/228 (50%), Positives = 162/228 (71%), Gaps = 29/228 (12%)

Query: 60  NSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKA 119
           +++ FQRFGFS+++P+ ++KE               N+   D V+ +   +   + +A  
Sbjct: 62  STTAFQRFGFSTSAPQQDDKET--------------NKHTDDGVNRSVGASTGASSEAN- 106

Query: 120 SDEGMEATDRTKESG-FDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLV 178
               +  T++ +E+G  DS     +S+SN  R+R +K+TAFSDSDS+   +++LS++DLV
Sbjct: 107 ---NVPGTEKAQEAGSLDS-----ISKSN--RKRTAKRTAFSDSDSE---DLDLSKEDLV 153

Query: 179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDV 238
           KLL E++E L +K+EE K M+DKVLRS+AEMENV  RT RE+EN+KK+AIQ+F+K+LLDV
Sbjct: 154 KLLLEKDESLKSKDEEFKDMKDKVLRSYAEMENVLARTKRESENTKKYAIQSFSKSLLDV 213

Query: 239 ADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           ADNL RASSVVK +F KID SND+  AV LLK+LLEGVEMTEKQLGEV
Sbjct: 214 ADNLSRASSVVKASFSKIDSSNDSDEAVTLLKTLLEGVEMTEKQLGEV 261

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527097|ref|XP_003532150.1| PREDICTED: protein grpE-like [Glycine max]

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/287 (44%), Positives = 161/287 (56%), Gaps = 65/287 (22%)

Query: 1   MMASRVLSRATRCVGRR-ALLLVPTSGKQHSPALSNQFHSLVFESPNKLTQVSLFHQTTL 59
           M A RVLSR++  + R   L  V  + +  S  LSN F+SL+  SPNKL  V      ++
Sbjct: 1   MFAYRVLSRSSATLSRSFTLFSVSRNSQPFSTNLSNNFNSLLHPSPNKLIPVQTNFLNSM 60

Query: 60  NSSIFQRFGFSSASPEPNEKEQGSAPDNNGAESPKPNRDAKDSVDNNGAEAPKPNGDAKA 119
           N S+  RFGFSS +   +  E     D +                               
Sbjct: 61  NPSLTSRFGFSSTASHEHASEGAKVSDQS------------------------------- 89

Query: 120 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 179
             E  EA D+TKES                               D E E +LSRDDL+K
Sbjct: 90  --EQAEAADQTKES-------------------------------DVEIECDLSRDDLIK 116

Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
           L+ E+E+LL  K++E+++MQDKVLR++AEMENV DRT REAENSKKFAIQNFAK+LLDVA
Sbjct: 117 LVAEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVA 176

Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           DNLGRASSVVKE+F KI+   +++ A  LLK+LL+GVEMTEKQL EV
Sbjct: 177 DNLGRASSVVKESFSKIESPEESSEAAELLKTLLKGVEMTEKQLAEV 223

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	323
TAIR|locus:2161615	302	MGE1 "mitochondrial GrpE 1" [A	0.291	0.311	0.691	7.6e-44
TAIR|locus:2116277	327	AR192 [Arabidopsis thaliana (t	0.520	0.513	0.508	6.3e-37
UNIPROTKB|O30862	200	grpE "Protein GrpE" [Vibrio ch	0.235	0.38	0.426	3.2e-10
TIGR_CMR|VC_0854	200	VC_0854 "heat shock protein Gr	0.235	0.38	0.426	3.2e-10
UNIPROTKB|Q5ZHV6	222	GRPEL1 "GrpE protein homolog"	0.263	0.382	0.431	2.2e-09
GENEDB_PFALCIPARUM|PF11_0258	301	PF11_0258 "co-chaperone GrpE,	0.253	0.272	0.395	2.3e-09
UNIPROTKB|Q8IIB6	301	PF11_0258 "Co-chaperone GrpE,	0.253	0.272	0.395	2.3e-09
ZFIN|ZDB-GENE-051120-111	217	grpel1 "GrpE-like 1, mitochond	0.359	0.534	0.315	3.2e-09
RGD|70947	217	Grpel1 "GrpE-like 1, mitochond	0.263	0.391	0.410	1.8e-08
FB|FBgn0014877	213	Roe1 "Roe1" [Drosophila melano	0.337	0.511	0.330	2e-08

TAIR|locus:2161615 MGE1 "mitochondrial GrpE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 65/94 (69%), Positives = 80/94 (85%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
             +++ +M+DK LR++AE +N+ DRT R AE++KKFA+QNFA +LLDVADNL RASSVVKE+
Sbjct:   135 KDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKES 194

Query:   253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
             F KID S D AGA PLLK+LLEGVEMTEKQL EV
Sbjct:   195 FSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEV 228

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0009411 "response to UV" evidence=IEP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2116277 AR192 [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 87/171 (50%), Positives = 112/171 (65%)

Query:   117 AKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFXXXXXXXXXXXXXXXXX 176
             +K S+E  + T    + G DS+ + +V+ S KR+R+ +K  A                  
Sbjct:    85 SKTSEE--KPTAEANQPGLDSESKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSAD 142

Query:   177 XXXXXXXXXXXXXXXNEE-MKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL 235
                             EE +KQ++DKVLR++AEMENV DRT R+AEN+KK+A+QNFAK+L
Sbjct:   143 DLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSL 202

Query:   236 LDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
             LDVADNLGRASSVVKE+F K+D S D+AGA PLLK+LLEGVEMTEKQL EV
Sbjct:   203 LDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEV 253

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009408 "response to heat" evidence=IEP

GO:0010286 "heat acclimation" evidence=IGI

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

UNIPROTKB|O30862 grpE "Protein GrpE" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 149 (57.5 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 38/89 (42%), Positives = 55/89 (61%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
             E +K+ QD VLR+ AE+EN++ R+ +E + ++KFA+  FA+ LL V DNL RA       
Sbjct:    59 ERVKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERA------- 111

Query:   253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
                I  ++   G V  +K LLEGVE+T K
Sbjct:   112 ---IQAAD---GEVEAIKPLLEGVELTHK 134

GO:0006457 "protein folding" evidence=ISS

TIGR_CMR|VC_0854 VC_0854 "heat shock protein GrpE" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 149 (57.5 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 38/89 (42%), Positives = 55/89 (61%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
             E +K+ QD VLR+ AE+EN++ R+ +E + ++KFA+  FA+ LL V DNL RA       
Sbjct:    59 ERVKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERA------- 111

Query:   253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEK 281
                I  ++   G V  +K LLEGVE+T K
Sbjct:   112 ---IQAAD---GEVEAIKPLLEGVELTHK 134

GO:0006457 "protein folding" evidence=ISS

UNIPROTKB|Q5ZHV6 GRPEL1 "GrpE protein homolog" [Gallus gallus (taxid:9031)]

 Score = 152 (58.6 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 41/95 (43%), Positives = 60/95 (63%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 251
             E++K++ DK  R+ A+ ENV+ R+ +  E +K + IQ+F K LL+VAD L +A+ SV KE
Sbjct:    74 EQLKEVTDKYKRALADAENVRQRSQKLVEEAKLYGIQSFCKDLLEVADILEKATESVPKE 133

Query:   252 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
                +I   N      P LKSL EG+ MTE Q+ +V
Sbjct:   134 ---EIKDEN------PHLKSLYEGLVMTEVQIQKV 159

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GENEDB_PFALCIPARUM|PF11_0258 PF11_0258 "co-chaperone GrpE, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 147 (56.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query:   196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 255
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   256 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
                +N+       + ++ +G+EMTE  L  +
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNI 239

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

UNIPROTKB|Q8IIB6 PF11_0258 "Co-chaperone GrpE, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 147 (56.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query:   196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 255
             K +++K L   AE EN+++R ++E E SK + I NFAK+LLDVADNL  A   + E  LK
Sbjct:   158 KVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDVADNLSLAIKNINEESLK 217

Query:   256 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
                +N+       + ++ +G+EMTE  L  +
Sbjct:   218 ---TNEE------INNIYKGIEMTETILHNI 239

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0030150 "protein import into mitochondrial matrix" evidence=TAS

GO:0051082 "unfolded protein binding" evidence=ISS

ZFIN|ZDB-GENE-051120-111 grpel1 "GrpE-like 1, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 150 (57.9 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 41/130 (31%), Positives = 72/130 (55%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
             E++K + DK  R+ A+ EN++ R+ +  +++K + IQ F K LL+VAD L +A+  V   
Sbjct:    69 EQLKDVTDKYKRALADTENLRQRSQKMIDDAKLYGIQGFCKDLLEVADILEKATESV--- 125

Query:   253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPE-HLYEPGCY 311
                  P  + + A P LK+L +G+ MTE Q+ +V     F  H    L P+   ++P  +
Sbjct:   126 -----PKTEISAANPHLKNLYDGLVMTEVQIQKV-----FQKHGLVKLSPDGQKFDPYEH 175

Query:   312 GSMFNHLILG 321
              ++F+  + G
Sbjct:   176 EAVFHAPVEG 185

GO:0051087 "chaperone binding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

RGD|70947 Grpel1 "GrpE-like 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 145 (56.1 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 39/95 (41%), Positives = 59/95 (62%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRAS-SVVKE 251
             E++K+  +K  R+ A+ EN++ R+ +  E +K + IQ F K LL+VAD L +A+ SV KE
Sbjct:    69 EQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVPKE 128

Query:   252 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
                  + SN+     P LKSL EG+ MTE Q+ +V
Sbjct:   129 -----EVSNNN----PHLKSLYEGLVMTEVQIQKV 154

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051087 "chaperone binding" evidence=IEA

FB|FBgn0014877 Roe1 "Roe1" [Drosophila melanogaster (taxid:7227)]

 Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 41/124 (33%), Positives = 67/124 (54%)

Query:   193 EEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN 252
             E+  ++ DK  RS A+ EN+++R  ++  ++K F IQ+F K LL+VAD LG A+  V ++
Sbjct:    67 EQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVADTLGHATQAVPKD 126

Query:   253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPP-EHLYEPGCY 311
               K+  + D       LK+L EG+ MT   L +V     F  H    L P    ++P  +
Sbjct:   127 --KLSGNAD-------LKNLYEGLTMTRASLLQV-----FKRHGLEPLDPINQKFDPNQH 172

Query:   312 GSMF 315
              ++F
Sbjct:   173 EALF 176

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS;NAS

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	323
pfam01025	165	pfam01025, GrpE, GrpE	5e-22
cd00446	137	cd00446, GrpE, GrpE is the adenine nucleotide exch	1e-21
PRK14141	209	PRK14141, PRK14141, heat shock protein GrpE; Provi	9e-19
COG0576	193	COG0576, GrpE, Molecular chaperone GrpE (heat shoc	2e-17
PRK14140	191	PRK14140, PRK14140, heat shock protein GrpE; Provi	1e-14
PRK14150	193	PRK14150, PRK14150, heat shock protein GrpE; Provi	1e-14
PRK14155	208	PRK14155, PRK14155, heat shock protein GrpE; Provi	7e-14
PRK14161	178	PRK14161, PRK14161, heat shock protein GrpE; Provi	1e-10
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	7e-10
PRK14151	176	PRK14151, PRK14151, heat shock protein GrpE; Provi	1e-08
PRK14160	211	PRK14160, PRK14160, heat shock protein GrpE; Provi	1e-08
PRK14162	194	PRK14162, PRK14162, heat shock protein GrpE; Provi	5e-08
PRK10325	197	PRK10325, PRK10325, heat shock protein GrpE; Provi	7e-08
PRK14156	177	PRK14156, PRK14156, heat shock protein GrpE; Provi	2e-07
PRK14148	195	PRK14148, PRK14148, heat shock protein GrpE; Provi	4e-07
PRK14153	194	PRK14153, PRK14153, heat shock protein GrpE; Provi	8e-07
PRK14158	194	PRK14158, PRK14158, heat shock protein GrpE; Provi	2e-05
PRK14149	191	PRK14149, PRK14149, heat shock protein GrpE; Provi	4e-05
PRK14159	176	PRK14159, PRK14159, heat shock protein GrpE; Provi	7e-05
PRK14146	215	PRK14146, PRK14146, heat shock protein GrpE; Provi	1e-04
PRK14147	172	PRK14147, PRK14147, heat shock protein GrpE; Provi	1e-04
PRK14154	208	PRK14154, PRK14154, heat shock protein GrpE; Provi	2e-04
PRK14143	238	PRK14143, PRK14143, heat shock protein GrpE; Provi	0.001
PRK14144	199	PRK14144, PRK14144, heat shock protein GrpE; Provi	0.003

>gnl|CDD|216249 pfam01025, GrpE, GrpE

 Score = 90.3 bits (225), Expect = 5e-22
 Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 14/118 (11%)

Query: 169 EIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAI 228
           E +   ++L    +  EE L    EE+++++D++LR  AE EN + RT RE E +KK+AI
Sbjct: 1   EEKEEEEELEDEEEALEEELEELEEEIEELKDRLLRLLAEFENYRKRTEREREEAKKYAI 60

Query: 229 QNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           + FAK LL V DNL RA +  KEN                +KSL+EGVEM  KQL +V
Sbjct: 61  EKFAKDLLPVLDNLERALAAAKEN--------------EDVKSLVEGVEMILKQLLKV 104

Length = 165

>gnl|CDD|238252 cd00446, GrpE, GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

 Score = 88.3 bits (220), Expect = 1e-21
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 14/88 (15%)

Query: 196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK 255
           ++++DK+LR+ AE EN + RT RE E ++K+AI+ FAK LL V DNL RA    K+    
Sbjct: 2   EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE--- 58

Query: 256 IDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
                        LK+L+EGVEMT KQL
Sbjct: 59  -----------EELKNLVEGVEMTLKQL 75

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Length = 137

>gnl|CDD|172630 PRK14141, PRK14141, heat shock protein GrpE; Provisional

 Score = 82.8 bits (205), Expect = 9e-19
 Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 11/98 (11%)

Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
           E L A+N E+K   D++LR  AEMEN++ RT R+  +++ + I  FA+ +L V+DNL RA
Sbjct: 41  EALKAENAELK---DRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRA 97

Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
              +        P+   A A   LK+L+EGVEMTE+ +
Sbjct: 98  LDAI--------PAEARAAADAGLKALIEGVEMTERAM 127

Length = 209

>gnl|CDD|223649 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 17/143 (11%)

Query: 141 STVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQD 200
           S   Q  +       + A    + ++E E     ++ ++  ++    L A+ EE+K   D
Sbjct: 2   SDKEQKTEEPDAEETEEAEKSEEEEAEEEEPEE-ENELEEEQQEIAELEAQLEELK---D 57

Query: 201 KVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN 260
           K LR+ AE EN++ RT RE E +KK+AI+ FAK LL V DNL RA    +++        
Sbjct: 58  KYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------K 110

Query: 261 DTAGAVPLLKSLLEGVEMTEKQL 283
           D        K+LLEGVEMT  QL
Sbjct: 111 DPE------KALLEGVEMTLDQL 127

Length = 193

>gnl|CDD|237622 PRK14140, PRK14140, heat shock protein GrpE; Provisional

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 17/123 (13%)

Query: 161 DSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREA 220
           + + + E+  E S  +L+   + +   L AK +E++   ++ LR  A+ EN K R  +E 
Sbjct: 22  EDEVEEETVEEESEAELLDEEQAKIAELEAKLDELE---ERYLRLQADFENYKRRIQKEN 78

Query: 221 ENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTE 280
           E ++K+  Q+ A  LL   DN  RA        L+I+  ++        KSLL+GVEM  
Sbjct: 79  EAAEKYRAQSLASDLLPALDNFERA--------LQIEADDEQT------KSLLKGVEMVH 124

Query: 281 KQL 283
           +QL
Sbjct: 125 RQL 127

Length = 191

>gnl|CDD|184539 PRK14150, PRK14150, heat shock protein GrpE; Provisional

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 17/99 (17%)

Query: 185 EELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGR 244
            +L  A+ EE    +D VLR+ AE+EN++ R  ++ E + KFA++ FA  LL V DNL R
Sbjct: 48  AQLAEAQAEE----RDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLER 103

Query: 245 ASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
           A           D  N+       LK+L+EGVE+T K L
Sbjct: 104 ALQA-------ADKENEA------LKALIEGVELTLKSL 129

Length = 193

>gnl|CDD|237627 PRK14155, PRK14155, heat shock protein GrpE; Provisional

 Score = 69.2 bits (169), Expect = 7e-14
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 11/90 (12%)

Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
           E+  ++D+ LR  AE EN K R  RE  +++ +AIQ FA+ LL  ADNLGRA++   ++ 
Sbjct: 28  EVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD- 86

Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
                S D A     +K+ + GVEMTEK+L
Sbjct: 87  -----SADPA-----VKNFIIGVEMTEKEL 106

Length = 208

>gnl|CDD|237630 PRK14161, PRK14161, heat shock protein GrpE; Provisional

 Score = 59.6 bits (144), Expect = 1e-10
 Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 27/157 (17%)

Query: 161 DSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREA 220
           D+  ++E  I    +++V+      E+   K  E+++++DK++R+ AE++N + R  +  
Sbjct: 4   DNIENNEQTINDIAEEIVE--TANPEITALK-AEIEELKDKLIRTTAEIDNTRKRLEKAR 60

Query: 221 ENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTE 280
           + +K +AI  FAK LL+V+DNL RA        L   P+N          +++ GV+MT+
Sbjct: 61  DEAKDYAIATFAKELLNVSDNLSRA--------LAHKPANSDVEVT----NIIAGVQMTK 108

Query: 281 KQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNH 317
            +L +V     F  H    + PE        GSMF++
Sbjct: 109 DELDKV-----FHKHHIEEIKPE-------IGSMFDY 133

Length = 178

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 19/130 (14%)

Query: 154 SKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVK 213
            ++   + + + + +    + +D    L+       AK  E+   QD  LR+ AE ENV+
Sbjct: 10  EQEAEEAGAAAQAAAAAAAAAEDAAPALEAELAEAEAKAAEL---QDSFLRAKAETENVR 66

Query: 214 DRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLL 273
            R   +   + KFAI++FA++LL V D+L  A        L  +  +        L+ L 
Sbjct: 67  RRAQEDVAKAHKFAIESFAESLLPVKDSLEAA--------LADESGD--------LEKLR 110

Query: 274 EGVEMTEKQL 283
           EGVE+T KQL
Sbjct: 111 EGVELTLKQL 120

Length = 185

>gnl|CDD|172640 PRK14151, PRK14151, heat shock protein GrpE; Provisional

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 13/92 (14%)

Query: 192 NEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKE 251
            E++   +D+ LR+ A+++NV+ R  ++ E + KFA++ FA  LL V D+L R       
Sbjct: 33  EEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERG------ 86

Query: 252 NFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
             L++  ++D A     +K + EGVE+T K  
Sbjct: 87  --LELSSADDEA-----IKPMREGVELTLKMF 111

Length = 176

>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 21/163 (12%)

Query: 120 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 179
            D   E  +       ++K +    + +     + K+    DS+  +E +IE  +D+  K
Sbjct: 6   KDAKHENMEEDCCKENENKEEDKGKEEDLEFEEIEKEEIIEDSEESNEVKIEELKDENNK 65

Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
           L +E ++L      E++ ++D++LR+ AE +N + RT +E E     A ++  K LL V 
Sbjct: 66  LKEENKKL----ENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVL 121

Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 282
           DNL RA++V               G+V  LK   +G+EMT KQ
Sbjct: 122 DNLERAAAV--------------EGSVEDLK---KGIEMTVKQ 147

Length = 211

>gnl|CDD|237631 PRK14162, PRK14162, heat shock protein GrpE; Provisional

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 18/140 (12%)

Query: 140 QSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQ 199
           +   S+ +  +   + +    ++    + E +  ++ +  L KE  +L  AKN   K ++
Sbjct: 4   EEFPSEKDLPQEETTDEAPKKEAKEAPKEEDQEKQNPVEDLEKEIADL-KAKN---KDLE 59

Query: 200 DKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS 259
           DK LRS AE++N+++R  +E     K+  Q+ AK +L   DNL RA +V          +
Sbjct: 60  DKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAV---------KA 110

Query: 260 NDTAGAVPLLKSLLEGVEMT 279
           +D A      K L +GV+MT
Sbjct: 111 DDEAA-----KQLKKGVQMT 125

Length = 194

>gnl|CDD|182379 PRK10325, PRK10325, heat shock protein GrpE; Provisional

 Score = 51.6 bits (123), Expect = 7e-08
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 19/124 (15%)

Query: 163 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 222
           + ++ +E    RD+  K+     +L  A+  E    +D +LR  AEMEN++ RT  + E 
Sbjct: 29  EPEASAEQVDPRDE--KIANLEAQLAEAQTRE----RDGILRVKAEMENLRRRTELDIEK 82

Query: 223 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 282
           + KFA++ F   LL V D+L RA  V  +             A P + +++EG+E+T K 
Sbjct: 83  AHKFALEKFINELLPVIDSLDRALEVADK-------------ANPDMSAMVEGIELTLKS 129

Query: 283 LGEV 286
           + +V
Sbjct: 130 MLDV 133

Length = 197

>gnl|CDD|237628 PRK14156, PRK14156, heat shock protein GrpE; Provisional

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 167 ESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKF 226
            +E E + +++V+   E+ EL +A NE   + ++K LR+ AEM+N++ R   E +  +++
Sbjct: 16  ATETEETVEEVVEETPEKSELELA-NERADEFENKYLRAHAEMQNIQRRANEERQQLQRY 74

Query: 227 AIQNFAKALLDVADNLGRASSV 248
             Q+ AKA+L   DNL RA +V
Sbjct: 75  RSQDLAKAILPSLDNLERALAV 96

Length = 177

>gnl|CDD|172637 PRK14148, PRK14148, heat shock protein GrpE; Provisional

 Score = 49.4 bits (117), Expect = 4e-07
 Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 9/92 (9%)

Query: 163 DSDSESEIELSRDDLVKLLKE---REELLMAKN------EEMKQMQDKVLRSFAEMENVK 213
           D ++ +++E +++     L+E    E+L  AK+      +   Q +D+ LR+ AEMEN++
Sbjct: 15  DIETAAQVETAQESASGALEELSVEEQLERAKDTIKELEDSCDQFKDEALRAKAEMENIR 74

Query: 214 DRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
            R  R+  N++KF I+ FAK LL V D++ +A
Sbjct: 75  KRAERDVSNARKFGIEKFAKELLPVIDSIEQA 106

Length = 195

>gnl|CDD|184540 PRK14153, PRK14153, heat shock protein GrpE; Provisional

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 15/131 (11%)

Query: 153 VSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAK-NEEMKQMQDKVLRSFAEMEN 211
           V K  A +    +S S  E + +   +      +    K  EE++ +++++ R  AE +N
Sbjct: 6   VGKDKAENSEARNSGSSAEEAEELKEEPEDSTADSETEKCREEIESLKEQLFRLAAEFDN 65

Query: 212 VKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKS 271
            + RT RE E ++KF ++     LL+V DN  RA    +        + D         S
Sbjct: 66  FRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESART-------AEDMN-------S 111

Query: 272 LLEGVEMTEKQ 282
           ++EG+EM  KQ
Sbjct: 112 IVEGIEMVSKQ 122

Length = 194

>gnl|CDD|172646 PRK14158, PRK14158, heat shock protein GrpE; Provisional

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 15/99 (15%)

Query: 181 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVAD 240
           +KE EE L AK  E     DK LR  A++EN + R  +E E   K+  ++    +L   D
Sbjct: 42  IKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVD 101

Query: 241 NLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMT 279
           N+ RA          +D +++ +     + +++EG+ MT
Sbjct: 102 NMERA----------LDHADEES-----MSAIIEGIRMT 125

Length = 194

>gnl|CDD|184538 PRK14149, PRK14149, heat shock protein GrpE; Provisional

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 17/104 (16%)

Query: 183 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 242
           E +E    K +EM    +K LR  A+ ENVK R  R+   + ++A +  A  LL V D L
Sbjct: 43  EIKEDFELKYKEMH---EKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDAL 99

Query: 243 GRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
             A                +A  V    +L +G+E+T ++L EV
Sbjct: 100 LGA--------------LKSAAEVDKESALTKGLELTMEKLHEV 129

Length = 191

>gnl|CDD|172647 PRK14159, PRK14159, heat shock protein GrpE; Provisional

 Score = 42.4 bits (99), Expect = 7e-05
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 147 NKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSF 206
           +++++    + A +      E+   +   +  KL K+ +EL           +DK +R+ 
Sbjct: 2   SEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYDEL-----------KDKYMRAN 50

Query: 207 AEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSV 248
           AE EN+K R  +E  ++  +A ++FAK LLDV D L  A +V
Sbjct: 51  AEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNV 92

Length = 176

>gnl|CDD|172635 PRK14146, PRK14146, heat shock protein GrpE; Provisional

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 126 ATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKERE 185
           A     ++  ++K     SQS        +     +S + +E   E + +        ++
Sbjct: 2   AETSNNKTSEEAKANEKKSQSQTLEESKLENMNSEESQTITEETQEQAVEGAETETSLQK 61

Query: 186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRA 245
           EL  AK +E++ ++D   R  AE +N K R+ +E  + +K A+++     L+  DNL R 
Sbjct: 62  ELDNAK-KEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERV 120

Query: 246 SSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
            +           +         LK  +EGV+M  K+   V
Sbjct: 121 GAT---------QNQS-----EELKPFVEGVKMILKEFYSV 147

Length = 215

>gnl|CDD|237625 PRK14147, PRK14147, heat shock protein GrpE; Provisional

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 16/93 (17%)

Query: 194 EMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF 253
           E+  ++   LR  A++EN + R  R+ E ++KFA +     LL V D+L           
Sbjct: 33  EIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSL----------- 81

Query: 254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
              D     AG  P    L +G+E+T KQL +V
Sbjct: 82  ---DAGLTAAGTEP--SPLRDGLELTYKQLLKV 109

Length = 172

>gnl|CDD|237626 PRK14154, PRK14154, heat shock protein GrpE; Provisional

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 137 SKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNE-EM 195
           + P+S     NK  + +  +    +   D   E+E  R+ L    +E+ E  + + E ++
Sbjct: 9   NNPESETKAKNKWEKVMEAEEEQEEGGGDGSQEMEPHREGLEFPSREKLEGQLTRMERKV 68

Query: 196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 242
            + + + LR+ AEM+N++ R  RE  +  KF  +     LL VAD+L
Sbjct: 69  DEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSL 115

Length = 208

>gnl|CDD|237624 PRK14143, PRK14143, heat shock protein GrpE; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 9/156 (5%)

Query: 111 PKPNGDAKASDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEI 170
             P  D       + +    +++  +S  + T  ++           A S  DS S +  
Sbjct: 1   STPEQDPLEVKLAVISESEAEDNSPESSEEVTEQEAELTNPEGDAAEAESSPDSGSAASE 60

Query: 171 ELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQN 230
             +  D    L + E+ L +  +E++++  + +R  A+ +N + RT RE E+ +     N
Sbjct: 61  TAA--DNAARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCN 118

Query: 231 FAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV 266
               +L V DN  RA         ++ P  + A A+
Sbjct: 119 TLSEILPVVDNFERARQ-------QLKPEGEEAQAL 147

Length = 238

>gnl|CDD|184535 PRK14144, PRK14144, heat shock protein GrpE; Provisional

 Score = 37.8 bits (87), Expect = 0.003
 Identities = 23/70 (32%), Positives = 39/70 (55%)

Query: 183 EREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNL 242
             EE L    ++  +  +K +R+ AE+ENV+ R  RE  N+ K+ ++    ALL V D+L
Sbjct: 49  ALEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSL 108

Query: 243 GRASSVVKEN 252
            +A  +  +N
Sbjct: 109 EQALQLADKN 118

Length = 199

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	323
PRK14161	178	heat shock protein GrpE; Provisional	99.97
PRK14148	195	heat shock protein GrpE; Provisional	99.97
PRK14162	194	heat shock protein GrpE; Provisional	99.97
PRK14158	194	heat shock protein GrpE; Provisional	99.97
PRK14151	176	heat shock protein GrpE; Provisional	99.97
PRK14143	238	heat shock protein GrpE; Provisional	99.97
PRK14160	211	heat shock protein GrpE; Provisional	99.97
PRK14155	208	heat shock protein GrpE; Provisional	99.97
PRK14146	215	heat shock protein GrpE; Provisional	99.97
PRK14139	185	heat shock protein GrpE; Provisional	99.97
PRK14147	172	heat shock protein GrpE; Provisional	99.97
PRK14154	208	heat shock protein GrpE; Provisional	99.97
PRK14140	191	heat shock protein GrpE; Provisional	99.97
PRK14145	196	heat shock protein GrpE; Provisional	99.97
PRK14153	194	heat shock protein GrpE; Provisional	99.97
PRK14159	176	heat shock protein GrpE; Provisional	99.97
PRK14141	209	heat shock protein GrpE; Provisional	99.97
PRK14150	193	heat shock protein GrpE; Provisional	99.96
PRK14163	214	heat shock protein GrpE; Provisional	99.96
PRK14149	191	heat shock protein GrpE; Provisional	99.96
PRK14144	199	heat shock protein GrpE; Provisional	99.96
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	99.96
KOG3003	236	consensus Molecular chaperone of the GrpE family [	99.96
PRK10325	197	heat shock protein GrpE; Provisional	99.96
PRK14156	177	heat shock protein GrpE; Provisional	99.96
PRK14157	227	heat shock protein GrpE; Provisional	99.95
PRK14164	218	heat shock protein GrpE; Provisional	99.94
PRK14142	223	heat shock protein GrpE; Provisional	99.94
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	99.91
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	99.89
PRK14143	238	heat shock protein GrpE; Provisional	93.84
PRK14163	214	heat shock protein GrpE; Provisional	91.93
PRK14155	208	heat shock protein GrpE; Provisional	91.92
PRK14154	208	heat shock protein GrpE; Provisional	91.62
PRK14147	172	heat shock protein GrpE; Provisional	90.29
PF06156	107	DUF972: Protein of unknown function (DUF972); Inte	89.48
PRK14162	194	heat shock protein GrpE; Provisional	87.81
PRK14139	185	heat shock protein GrpE; Provisional	87.48
PRK14157	227	heat shock protein GrpE; Provisional	87.4
PRK14148	195	heat shock protein GrpE; Provisional	87.37
PRK14158	194	heat shock protein GrpE; Provisional	87.15
PRK14151	176	heat shock protein GrpE; Provisional	86.55
PRK14144	199	heat shock protein GrpE; Provisional	85.68
PTZ00464	211	SNF-7-like protein; Provisional	85.46
PRK14145	196	heat shock protein GrpE; Provisional	83.96
PRK14146	215	heat shock protein GrpE; Provisional	82.62
KOG2911	439	consensus Uncharacterized conserved protein [Funct	82.16

>PRK14161 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1e-30  Score=233.79  Aligned_cols=128  Identities=23%  Similarity=0.357  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      +++.++-.+++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.+    
T Consensus        17 ~~~~~~~~~~ei~~l~~e~~elkd~~lR~~AefeN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~----   92 (178)
T PRK14161         17 AEEIVETANPEITALKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPAN----   92 (178)
T ss_pred             HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcCccc----
Confidence            3456677788999999999999999999999999999999999999999999999999999999999999987642    


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                              .+..++.+++||+||+++|.++|+++||++|.+   ..|++|||++||||++.+-
T Consensus        93 --------~~~~~~~~~~Gv~mi~k~l~~vL~~~Gv~~I~~---~~G~~FDP~~HEAv~~~~~  144 (178)
T PRK14161         93 --------SDVEVTNIIAGVQMTKDELDKVFHKHHIEEIKP---EIGSMFDYNLHNAISQIEH  144 (178)
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHHHHHCCCEEecC---CCCCCCChHHhhhheeeCC
Confidence                    012357899999999999999999999998721   2489999999999998764

>PRK14148 heat shock protein GrpE; Provisional

Probab=99.97  E-value=9.6e-31  Score=236.97  Aligned_cols=126  Identities=26%  Similarity=0.343  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      +...+..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+..    
T Consensus        38 ~~~e~~~l~~~l~~l~~e~~elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~----  113 (195)
T PRK14148         38 VEEQLERAKDTIKELEDSCDQFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQALKHEVKL----  113 (195)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc----
Confidence            3566788888999999999999999999999999999999999999999999999999999999999999986531    


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                                ...++|++||+||+++|.++|+++||++|.    +.|.+|||++||||++.+-.
T Consensus       114 ----------~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~----~~G~~FDP~~HEAv~~~~~~  163 (195)
T PRK14148        114 ----------EEAIAMKEGIELTAKMLVDILKKNGVEELD----PKGEKFDPNLHEAMAMIPNP  163 (195)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhHhheeeeeCCC
Confidence                      235789999999999999999999999873    35889999999999987643

>PRK14162 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.3e-30  Score=235.96  Aligned_cols=124  Identities=25%  Similarity=0.272  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCC
Q 020610          178 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  257 (323)
Q Consensus       178 ~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d  257 (323)
                      ...+..++.+++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+.+.      
T Consensus        38 ~~e~~~l~~~l~~l~~e~~elkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~------  111 (194)
T PRK14162         38 QNPVEDLEKEIADLKAKNKDLEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKAD------  111 (194)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc------
Confidence            34555667778888999999999999999999999999999999999999999999999999999999998653      


Q ss_pred             CCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          258 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       258 ~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                              ++.++.|++||+||+++|.++|+++||++|.    ..|.+|||++||||++.+.
T Consensus       112 --------~~~~~~l~~Gvemi~k~l~~vL~~~GV~~I~----~~G~~FDP~~HEAv~~~~~  161 (194)
T PRK14162        112 --------DEAAKQLKKGVQMTLDHLVKALKDHGVTEIK----ADGEKFDPTLHQAVQTVAA  161 (194)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhHhhhheeecC
Confidence                    1345789999999999999999999999883    3588999999999998754

>PRK14158 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.4e-30  Score=235.70  Aligned_cols=125  Identities=26%  Similarity=0.295  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      ....+..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.     
T Consensus        38 ~~~~~~~le~~l~~le~e~~el~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~-----  112 (194)
T PRK14158         38 AADRIKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADE-----  112 (194)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccCc-----
Confidence            345567778889999999999999999999999999999999999999999999999999999999999987643     


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                                +.+++|++||+||+++|.++|+++||++|.   ..+|.+|||++||||++.+-
T Consensus       113 ----------~~~~~i~~Gv~mi~k~l~~vLek~Gv~~I~---~~~G~~FDP~~HEAv~~~~~  162 (194)
T PRK14158        113 ----------ESMSAIIEGIRMTLSMLLSTLKKFGVTPVE---AEKGTPFDPAYHQAMCQVES  162 (194)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHHCCCEEec---CCCCCCCChHHhhhheeecC
Confidence                      135789999999999999999999999872   12489999999999998654

>PRK14151 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.4e-30  Score=232.34  Aligned_cols=122  Identities=25%  Similarity=0.372  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCC
Q 020610          182 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  261 (323)
Q Consensus       182 aelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d  261 (323)
                      ..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+++....         
T Consensus        23 ~~l~~~i~~le~e~~el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~---------   93 (176)
T PRK14151         23 DDLTARVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERGLELSSAD---------   93 (176)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc---------
Confidence            34455677788899999999999999999999999999999999999999999999999999999876531         


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          262 TAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       262 ~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                          ++.+++|++||+||+++|.++|+++||++|.    ..|++|||++||||++.+-.
T Consensus        94 ----~~~~~~~~~Gv~mi~k~l~~~L~k~Gv~~i~----~~G~~FDP~~HEAv~~~~~~  144 (176)
T PRK14151         94 ----DEAIKPMREGVELTLKMFQDTLKRYQLEAVD----PHGEPFNPEHHQAMAMQESA  144 (176)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCCHHHhhcceeeCCC
Confidence                1346889999999999999999999999873    35889999999999987644

>PRK14143 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.5e-30  Score=241.72  Aligned_cols=126  Identities=21%  Similarity=0.203  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      ....+..++++|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+++..    
T Consensus        65 ~~~~~~~l~~el~~l~~e~~elkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~----  140 (238)
T PRK14143         65 NAARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQQLKPE----  140 (238)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhccccc----
Confidence            4556677888899999999999999999999999999999999999999999999999999999999999987542    


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                               ......|+.||+||+++|.++|+++||++|.    ..|.+|||++||||++.+-
T Consensus       141 ---------~~~~~~l~~Gve~i~k~l~~~L~k~GV~~i~----~~G~~FDP~~HEAv~~~~~  190 (238)
T PRK14143        141 ---------GEEAQALHRSYQGLYKQLVDVLKRLGVSPMR----VVGQEFDPNLHEAVLREPS  190 (238)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHHCCCeeeC----CCCCCCChHHhheeeeecC
Confidence                     1224689999999999999999999999873    3588999999999998654

>PRK14160 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2.4e-30  Score=236.86  Aligned_cols=128  Identities=27%  Similarity=0.311  Sum_probs=115.0

Q ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhh
Q 020610          170 IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVV  249 (323)
Q Consensus       170 ~~ls~deL~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v  249 (323)
                      .+....++.+.+..+++++..+++++++++++|+|++|||+|||||++||++.+++||+++|+++||||+|||+||+.+.
T Consensus        52 ~~~~~~~l~~e~~~l~~~l~~l~~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~e~~~~~LLpVlDnLerAl~~~  131 (211)
T PRK14160         52 NEVKIEELKDENNKLKEENKKLENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAVE  131 (211)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcc
Confidence            34455578888999999999999999999999999999999999999999999999999999999999999999999863


Q ss_pred             hhhcccCCCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          250 KENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       250 ~ee~~~~d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                      ..                 .+.|++||+||+++|.++|+++||++|     ++.++|||++|+||++.+-
T Consensus       132 ~~-----------------~~~l~~Gv~mi~kql~~vL~k~GVe~I-----~~~G~FDP~~HEAv~~~~~  179 (211)
T PRK14160        132 GS-----------------VEDLKKGIEMTVKQFKTSLEKLGVEEI-----STEGEFDPNLHNAVMHVED  179 (211)
T ss_pred             cc-----------------hhHHHHHHHHHHHHHHHHHHHCCCEEe-----CCCCCCChHHhceeeeeCC
Confidence            32                 257999999999999999999999987     4445899999999998753

>PRK14155 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2.4e-30  Score=236.32  Aligned_cols=124  Identities=33%  Similarity=0.433  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCC
Q 020610          182 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  261 (323)
Q Consensus       182 aelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d  261 (323)
                      .+++++|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....      +  
T Consensus        16 ~~l~~~l~~le~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~------~--   87 (208)
T PRK14155         16 DDAAQEIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKD------S--   87 (208)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHhccccc------c--
Confidence            34455677788899999999999999999999999999999999999999999999999999999987642      0  


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          262 TAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       262 ~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                         .++.+++|++||+||+++|.++|+++||++|.   ...|.+|||++||||++.+-
T Consensus        88 ---~~~~~~~i~~Gvemi~k~~~~~L~k~GV~~I~---~~~G~~FDP~~HEAv~~~~~  139 (208)
T PRK14155         88 ---ADPAVKNFIIGVEMTEKELLGAFERNGLKKID---PAKGDKFDPHLHQAMMEQPS  139 (208)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHHHHHCCCceec---CCCCCCCChhHhceeeeecC
Confidence               02346899999999999999999999999872   11489999999999998764

>PRK14146 heat shock protein GrpE; Provisional

Probab=99.97  E-value=3.1e-30  Score=236.58  Aligned_cols=121  Identities=22%  Similarity=0.263  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCC
Q 020610          181 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  260 (323)
Q Consensus       181 laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~  260 (323)
                      +..++.+++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....        
T Consensus        56 ~~~l~~~l~~l~~e~~el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerAl~~~~~~--------  127 (215)
T PRK14146         56 ETSLQKELDNAKKEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGATQNQS--------  127 (215)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc--------
Confidence            445566788889999999999999999999999999999999999999999999999999999999876431        


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          261 DTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       261 d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                            +.+++|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-
T Consensus       128 ------~~~~~l~~Gv~mi~k~l~~~L~k~Gv~~i~----~~G~~FDP~~HeAv~~~~~  176 (215)
T PRK14146        128 ------EELKPFVEGVKMILKEFYSVLEKSNVIRFD----PKGEPFDPMSMEALSSEEG  176 (215)
T ss_pred             ------chhhHHHHHHHHHHHHHHHHHHHCcCeeeC----CCCCCCChhHhceeeeecC
Confidence                  235789999999999999999999999873    3589999999999998764

>PRK14139 heat shock protein GrpE; Provisional

Probab=99.97  E-value=4e-30  Score=231.37  Aligned_cols=118  Identities=31%  Similarity=0.309  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCC
Q 020610          181 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  260 (323)
Q Consensus       181 laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~  260 (323)
                      +..++++|+.+++++++++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.         
T Consensus        34 ~~~l~~~l~~le~e~~elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~---------  104 (185)
T PRK14139         34 APALEAELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAALADESG---------  104 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc---------
Confidence            34455667888899999999999999999999999999999999999999999999999999999976432         


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          261 DTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       261 d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                             .+..|++||+||+++|.++|+++||++|.    ..|++|||++||||++.+
T Consensus       105 -------~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~----~~G~~FDP~~HEAv~~~~  151 (185)
T PRK14139        105 -------DLEKLREGVELTLKQLTSAFEKGRVVEIN----PVGEKFDPHQHQAISMVP  151 (185)
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHHCCCceeC----CCCCCCChHHhheeeeec
Confidence                   24789999999999999999999999873    368999999999999864

>PRK14147 heat shock protein GrpE; Provisional

Probab=99.97  E-value=3.3e-30  Score=229.25  Aligned_cols=116  Identities=23%  Similarity=0.268  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCC
Q 020610          184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  263 (323)
Q Consensus       184 lEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~  263 (323)
                      ++.+|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...            
T Consensus        23 l~~~l~~l~~e~~elkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl~~~~~------------   90 (172)
T PRK14147         23 LKAEVESLRSEIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGLTAAGT------------   90 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccc------------
Confidence            34456777888999999999999999999999999999999999999999999999999999987543            


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          264 GAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       264 ~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                          ...+|++||+||+++|.++|+++||++|.    ..|++|||++||||++.+-
T Consensus        91 ----~~~~l~~Gv~mi~k~l~~~L~~~Gv~~i~----~~G~~FDP~~HeAv~~~~~  138 (172)
T PRK14147         91 ----EPSPLRDGLELTYKQLLKVAADNGLTLLD----PVGQPFNPEHHQAISQGEA  138 (172)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChHHhceeeeecC
Confidence                13679999999999999999999999873    3588999999999998654

>PRK14154 heat shock protein GrpE; Provisional

Probab=99.97  E-value=3.7e-30  Score=235.22  Aligned_cols=120  Identities=23%  Similarity=0.279  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCC
Q 020610          184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  263 (323)
Q Consensus       184 lEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~  263 (323)
                      ++++|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+....           
T Consensus        57 l~~el~~le~e~~elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL~~~~~~-----------  125 (208)
T PRK14154         57 LEGQLTRMERKVDEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPASE-----------  125 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-----------
Confidence            344566778888999999999999999999999999999999999999999999999999999876431           


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          264 GAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       264 ~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                        ++.+++|++||+||+++|.++|+++||++|.   ..+|.+|||++||||++.+-
T Consensus       126 --~~~~~~l~eGvemi~k~l~~vL~k~GVe~I~---~~~G~~FDP~~HEAv~~~~~  176 (208)
T PRK14154        126 --DPQVKSMRDGMSLTLDLLHNTLAKHGVQVIN---PNPGDPFDPALHEAMSVQAV  176 (208)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHHHCCCEEec---CCCCCCCChhHhheeeeeCC
Confidence              1346899999999999999999999999872   12489999999999988653

>PRK14140 heat shock protein GrpE; Provisional

Probab=99.97  E-value=4.6e-30  Score=231.94  Aligned_cols=124  Identities=27%  Similarity=0.347  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCC
Q 020610          179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  258 (323)
Q Consensus       179 ~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~  258 (323)
                      .+|.+++++++++++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+..      
T Consensus        37 ~~~~~l~~~i~~l~~ei~elkd~~lR~~Ae~eN~rkR~~rE~~~~~~~a~~~~~~~LLpvlDnLerAl~~~~~~------  110 (191)
T PRK14140         37 ELLDEEQAKIAELEAKLDELEERYLRLQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERALQIEADD------  110 (191)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc------
Confidence            45566677788899999999999999999999999999999999999999999999999999999999975431      


Q ss_pred             CCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          259 SNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       259 s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                              +.+++|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-.
T Consensus       111 --------~~~~~i~~Gv~mi~k~l~~~L~k~GV~~i~----~~Ge~FDP~~HEAv~~~~~~  160 (191)
T PRK14140        111 --------EQTKSLLKGVEMVHRQLLEALKKEGVEVIE----AVGEQFDPNLHQAVMQDEDE  160 (191)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHHCCCEeeC----CCCCCCChHHhccceeeCCC
Confidence                    246889999999999999999999999872    46889999999999987643

>PRK14145 heat shock protein GrpE; Provisional

Probab=99.97  E-value=5.6e-30  Score=232.21  Aligned_cols=124  Identities=23%  Similarity=0.283  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhccc
Q 020610          176 DLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLK  255 (323)
Q Consensus       176 eL~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~  255 (323)
                      +....+..+++++..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+...    
T Consensus        42 ~~~~e~~~l~~~l~~le~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl~~~~~----  117 (196)
T PRK14145         42 QTVDEIEELKQKLQQKEVEAQEYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSGD----  117 (196)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhcccc----
Confidence            3455667778889999999999999999999999999999999999999999999999999999999999987321    


Q ss_pred             CCCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          256 IDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       256 ~d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                                   ...|++||+||+++|.++|+++||++|.    ..|.+|||++||||++.+-.
T Consensus       118 -------------~~~l~~Gv~mi~k~l~~vL~k~GVe~I~----~~Ge~FDP~~HEAv~~~~~~  165 (196)
T PRK14145        118 -------------YNSLKEGIELIYRQFKKILDKFGVKEIE----AEGQIFDPYKHHAVMQEEVE  165 (196)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCCchhhheeeeeCCC
Confidence                         3579999999999999999999999873    35889999999999987643

>PRK14153 heat shock protein GrpE; Provisional

Probab=99.97  E-value=4.6e-30  Score=232.43  Aligned_cols=122  Identities=25%  Similarity=0.345  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCC
Q 020610          180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS  259 (323)
Q Consensus       180 ~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s  259 (323)
                      .+..++.+|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+..       
T Consensus        34 ~~~~~~~ei~~l~~e~~elkd~~lR~~AEfeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~~-------  106 (194)
T PRK14153         34 EDSTADSETEKCREEIESLKEQLFRLAAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESARTA-------  106 (194)
T ss_pred             hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-------
Confidence            3556677888999999999999999999999999999999999999999999999999999999999987541       


Q ss_pred             CCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          260 NDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       260 ~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                             +.++.|++||+||+++|.++|+++||++|.    +.|.+|||++|+||++.+-
T Consensus       107 -------~~~~~l~~Gvemi~k~~~~vL~k~Gv~~I~----~~G~~FDP~~HEAv~~~~~  155 (194)
T PRK14153        107 -------EDMNSIVEGIEMVSKQFFSILEKYGLERIE----CEGEEFDPHRHEAMMHVET  155 (194)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHHCCCeeeC----CCCCCCChhHhceeeeeCC
Confidence                   235789999999999999999999999873    3588999999999998653

>PRK14159 heat shock protein GrpE; Provisional

Probab=99.97  E-value=8.1e-30  Score=227.79  Aligned_cols=114  Identities=26%  Similarity=0.278  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCch
Q 020610          187 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  266 (323)
Q Consensus       187 eL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~~  266 (323)
                      +++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+.+..              
T Consensus        31 ~i~~l~~e~~elkd~~lR~~AdfeN~rkR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~--------------   96 (176)
T PRK14159         31 EQNKLQKDYDELKDKYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECHD--------------   96 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc--------------
Confidence            467788899999999999999999999999999999999999999999999999999999976531              


Q ss_pred             hhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          267 PLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       267 e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                      .....|++||+||+++|.++|+++||++|     ++.++|||++||||++.+-
T Consensus        97 ~~~~~l~~Gv~mi~k~l~~vL~k~Gv~~I-----~~~G~FDP~~HEAv~~~~~  144 (176)
T PRK14159         97 EISLKIKEGVQNTLDLFLKKLEKHGVALI-----KEEKEFDPNLHEAMFHVDS  144 (176)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHCcCEec-----CCCCCCChHHhhhhheeCC
Confidence            23468999999999999999999999987     3444799999999998764

>PRK14141 heat shock protein GrpE; Provisional

Probab=99.97  E-value=8e-30  Score=233.12  Aligned_cols=124  Identities=32%  Similarity=0.445  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCC
Q 020610          184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  263 (323)
Q Consensus       184 lEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~  263 (323)
                      ++++|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+++++.+.       + .
T Consensus        36 ~~~~i~~le~e~~elkd~~lR~~Ae~eN~RKR~~kE~e~~~~~a~~~~~~dLLpViDnLerAl~~~~~~~-------~-~  107 (209)
T PRK14141         36 EPDPLEALKAENAELKDRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAEA-------R-A  107 (209)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhcccccc-------c-c
Confidence            3445666778888999999999999999999999999999999999999999999999999999876420       0 0


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          264 GAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       264 ~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                      ..++.+++|++||+||+++|.++|+++||++|.    ..|++|||++||||++.+-
T Consensus       108 ~~~~~~~~l~eGv~mi~k~l~~vLek~GV~~I~----~~Ge~FDP~~HEAv~~~~~  159 (209)
T PRK14141        108 AADAGLKALIEGVEMTERAMLNALERHGVKKLD----PEGQKFDPNFHQAMFEVPN  159 (209)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHCCCEEEC----CCCCCCChHHhceeeeecC
Confidence            012457899999999999999999999999883    3588999999999998653

>PRK14150 heat shock protein GrpE; Provisional

Probab=99.96  E-value=1.2e-29  Score=229.13  Aligned_cols=123  Identities=31%  Similarity=0.389  Sum_probs=104.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCC
Q 020610          178 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  257 (323)
Q Consensus       178 ~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d  257 (323)
                      ...++++++++..+++   +++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....     
T Consensus        40 ~~~i~~l~~~l~~~~~---~~kd~~lR~~AefeN~rkR~~kE~~~~~~~a~~~~~~~lL~v~DnlerAl~~~~~~-----  111 (193)
T PRK14150         40 DARIAELEAQLAEAQA---EERDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADKE-----  111 (193)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccccc-----
Confidence            3445556666655544   68999999999999999999999999999999999999999999999999876431     


Q ss_pred             CCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          258 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       258 ~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                              +..+++|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-.
T Consensus       112 --------~~~~~~~~~Gv~mi~~~l~~~L~~~Gv~~i~----~~G~~FDP~~HeAv~~~~~~  162 (193)
T PRK14150        112 --------NEALKALIEGVELTLKSLLDTVAKFGVEVVG----PVGEPFNPEVHQAISMQESE  162 (193)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHHCCCeeeC----CCCCCCCHhHcceeeeeCCC
Confidence                    1346889999999999999999999999873    35889999999999987654

>PRK14163 heat shock protein GrpE; Provisional

Probab=99.96  E-value=2.3e-29  Score=230.86  Aligned_cols=115  Identities=18%  Similarity=0.212  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCC
Q 020610          181 LKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSN  260 (323)
Q Consensus       181 laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~  260 (323)
                      ...++++|..+++++++++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.           
T Consensus        42 ~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~-----------  110 (214)
T PRK14163         42 TAGLTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAREHG-----------  110 (214)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhch-----------
Confidence            345666788889999999999999999999999999999999999999999999999999999998752           


Q ss_pred             CCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          261 DTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       261 d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                                .|++||+||+++|.++|+++||++|.    ..|.+|||++||||++.+-.
T Consensus       111 ----------~l~~Gv~mi~k~l~~~L~k~Gv~~I~----~~G~~FDP~~HEAv~~~~~~  156 (214)
T PRK14163        111 ----------ELVGGFKSVAESLETTVAKLGLQQFG----KEGEPFDPTIHEALMHSYAP  156 (214)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhHhceeeeecCC
Confidence                      38899999999999999999999873    35889999999999986654

>PRK14149 heat shock protein GrpE; Provisional

Probab=99.96  E-value=2.3e-29  Score=227.44  Aligned_cols=115  Identities=25%  Similarity=0.248  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCch
Q 020610          187 LLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAV  266 (323)
Q Consensus       187 eL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~~  266 (323)
                      .|+.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+...+              
T Consensus        44 ~~~~l~~e~~elkd~~lR~~AefEN~rKR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~~--------------  109 (191)
T PRK14149         44 IKEDFELKYKEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSAAEV--------------  109 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc--------------
Confidence            366677888899999999999999999999999999999999999999999999999999986541              


Q ss_pred             hhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          267 PLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       267 e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                      ....+|++||+||+++|.++|+++||++|     ++.++|||++||||++.+-.
T Consensus       110 ~~~~~l~~Gv~mi~k~l~~vL~k~GV~~I-----~~~G~FDP~~HEAv~~v~~~  158 (191)
T PRK14149        110 DKESALTKGLELTMEKLHEVLARHGIEGI-----ECLEEFDPNFHNAIMQVKSE  158 (191)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHCCCEEe-----CCCCCCChHHhheeeeecCC
Confidence            22468999999999999999999999987     34446999999999987643

>PRK14144 heat shock protein GrpE; Provisional

Probab=99.96  E-value=3.5e-29  Score=227.48  Aligned_cols=119  Identities=27%  Similarity=0.348  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCC
Q 020610          182 KEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSND  261 (323)
Q Consensus       182 aelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d  261 (323)
                      ..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.++...         
T Consensus        48 ~~l~~~i~~le~e~~elkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~---------  118 (199)
T PRK14144         48 TALEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQALQLADKN---------  118 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHccccc---------
Confidence            44566778889999999999999999999999999999999999999999999999999999999886531         


Q ss_pred             CCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          262 TAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       262 ~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                            ...+|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-
T Consensus       119 ------~~~~i~~Gv~mi~k~l~~~L~k~GV~~I~----~~G~~FDP~~HEAv~~~~~  166 (199)
T PRK14144        119 ------SDPSMHEGLELTMKLFLDALQKFDVEQID----PLGQTFDPQQHEAMSMQPA  166 (199)
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhHhceeeeeCC
Confidence                  12479999999999999999999999873    3588999999999988653

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=5e-29  Score=224.82  Aligned_cols=116  Identities=36%  Similarity=0.490  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCc
Q 020610          186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  265 (323)
Q Consensus       186 eeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~  265 (323)
                      +++..|+.++++++++|+|++|||+|||+|++||++++++||+++|+++||||+|||+|||.++...       .     
T Consensus        43 ~~i~~Le~q~~e~~~~~lr~~Ae~eN~rkR~~re~e~~~k~a~e~~~~dlLpviDnlerAl~~~~~~-------~-----  110 (193)
T COG0576          43 QEIAELEAQLEELKDKYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDD-------K-----  110 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------c-----
Confidence            5678888899999999999999999999999999999999999999999999999999999987652       1     


Q ss_pred             hhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          266 VPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       266 ~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                      +.. ++|++||+||+++|.++|.++||++|   . ++|+.|||++|+||++.+
T Consensus       111 d~~-~~l~~Gvem~~~~l~~~L~k~Gv~~i---~-~~Ge~FDP~~HeAv~~~~  158 (193)
T COG0576         111 DPE-KALLEGVEMTLDQLLDALEKLGVEEI---G-PEGEKFDPNLHEAVQRVE  158 (193)
T ss_pred             chH-HHHHHHHHHHHHHHHHHHHHCCCEEe---C-CCCCCCCHHHhhheeeec
Confidence            122 78999999999999999999999987   2 358899999999999873

>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=6.7e-29  Score=229.50  Aligned_cols=133  Identities=41%  Similarity=0.500  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      +..++++++..++..+++ .+|+|+|+|.+||++|+|+|++|.++++++||+|+|+++||.|.|+|++|++++++++.. 
T Consensus        69 ~~ae~~~l~~~~k~~~e~-~eLkdk~~rs~Ad~eNlr~R~~r~~edak~FaiQ~f~kdLleVaD~Le~a~~~v~ee~~~-  146 (236)
T KOG3003|consen   69 SLAEKALLEKVLKLEKEE-QELKDKYLRSLAECENLRDRTIRDVEDAKKFAIQSFCKDLLEVADNLEKATECVKEESEK-  146 (236)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcc-
Confidence            556667777766665555 999999999999999999999999999999999999999999999999999999986322 


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccccC
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILG  321 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~~  321 (323)
                            .+++..++.+++|+.||+++|.+||.+||++++.    +.|++|||+.||||+|.+..+
T Consensus       147 ------~d~~~~L~~l~eGl~mte~ql~~vf~KhGLekld----PigekFDPn~HEAvfq~p~~~  201 (236)
T KOG3003|consen  147 ------EDQKKDLKDLFEGLSMTEAQLKEVFAKHGLEKLD----PIGEKFDPNEHEAVFQVPDAA  201 (236)
T ss_pred             ------cccchHHHHHHhHHHHHHHHHHHHHHHcCceecC----CCCCCCCcchhheeEeccccC
Confidence                  2346789999999999999999999999999762    347899999999999977643

>PRK10325 heat shock protein GrpE; Provisional

Probab=99.96  E-value=6.8e-29  Score=224.83  Aligned_cols=120  Identities=28%  Similarity=0.361  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCC
Q 020610          180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPS  259 (323)
Q Consensus       180 ~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s  259 (323)
                      .+++++.++.+++.   +++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+....       
T Consensus        43 ~~~~l~~~~~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~lLpv~DnlerAl~~~~~~-------  112 (197)
T PRK10325         43 KIANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA-------  112 (197)
T ss_pred             HHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-------
Confidence            34455545544432   25899999999999999999999999999999999999999999999999886421       


Q ss_pred             CCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          260 NDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       260 ~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                            ...+++|++||+||+++|.++|+++||++|.    .+|.+|||++||||++.+-
T Consensus       113 ------~~~~~~l~~Gv~m~~~~l~~~L~~~Gv~~i~----~~G~~FDP~~HEAv~~~~~  162 (197)
T PRK10325        113 ------NPDMSAMVEGIELTLKSMLDVVRKFGVEVIA----ETNVPLDPNVHQAIAMVES  162 (197)
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHHCcCeeeC----CCCCCCChhHhceeeeeCC
Confidence                  1236889999999999999999999999873    4689999999999998653

>PRK14156 heat shock protein GrpE; Provisional

Probab=99.96  E-value=1.3e-28  Score=220.30  Aligned_cols=122  Identities=23%  Similarity=0.280  Sum_probs=105.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhh
Q 020610          173 SRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKEN  252 (323)
Q Consensus       173 s~deL~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee  252 (323)
                      +.++.....+ +..+|+.+++++++++++|+|++|||+|||||++||++++++||.++|+++||||+|||+||+.+... 
T Consensus        22 ~~~~~~~~~~-~~~~l~~l~~e~~elkd~~lR~~AEfeN~rKR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~-   99 (177)
T PRK14156         22 TVEEVVEETP-EKSELELANERADEFENKYLRAHAEMQNIQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEGL-   99 (177)
T ss_pred             HHHHHHhhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhCccc-
Confidence            3344433332 35668889999999999999999999999999999999999999999999999999999999987532 


Q ss_pred             cccCCCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          253 FLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       253 ~~~~d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                                      ..+|++||+||+++|.++|+++||++|     ++. +|||++|+||++.+
T Consensus       100 ----------------~~~l~~Gv~mi~k~l~~~L~~~GV~~i-----~~~-~FDP~~HEAv~~~~  143 (177)
T PRK14156        100 ----------------TDDVKKGLEMVQESLIQALKEEGVEEV-----AVD-SFDHNLHMAVQTLP  143 (177)
T ss_pred             ----------------chhHHHHHHHHHHHHHHHHHHCCCeec-----CCC-CCChhHhhcceeec
Confidence                            136899999999999999999999987     333 89999999999865

>PRK14157 heat shock protein GrpE; Provisional

Probab=99.95  E-value=1.7e-27  Score=220.13  Aligned_cols=112  Identities=14%  Similarity=0.170  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCC
Q 020610          184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTA  263 (323)
Q Consensus       184 lEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~  263 (323)
                      ++.+|..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+..             
T Consensus        82 ~~~~l~~le~e~~e~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRAl~~~~-------------  148 (227)
T PRK14157         82 TLTPLGQAKKEAAEYLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRIREHSE-------------  148 (227)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhccc-------------
Confidence            4455667788889999999999999999999999999999999999999999999999999998642             


Q ss_pred             CchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          264 GAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       264 ~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                              +.+||+||+++|.++|+++||++|.    ..|++|||++||||++.+-.
T Consensus       149 --------~~~~~~~i~k~l~~vL~k~GVe~I~----~~Ge~FDP~~HEAV~~~~~~  193 (227)
T PRK14157        149 --------MDDSFKAVAAKIDKAFEKFGVEKFG----EKGEDFDPTKHDAILHKPDP  193 (227)
T ss_pred             --------cchHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhhhceeeeecCC
Confidence                    3478999999999999999999872    35889999999999987643

>PRK14164 heat shock protein GrpE; Provisional

Probab=99.94  E-value=9.6e-27  Score=214.08  Aligned_cols=108  Identities=19%  Similarity=0.145  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCc
Q 020610          186 ELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGA  265 (323)
Q Consensus       186 eeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~  265 (323)
                      ..+..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+++...              
T Consensus        77 ~~~~~le~el~el~d~llR~~AE~eN~RkR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~--------------  142 (218)
T PRK14164         77 GEASTVEAQLAERTEDLQRVTAEYANYRRRTERERQAIIETAKAGVATDLLPILDDLDLAEQHGDL--------------  142 (218)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc--------------
Confidence            457777889999999999999999999999999999999999999999999999999999986432              


Q ss_pred             hhhHHhHHHH-HHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          266 VPLLKSLLEG-VEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       266 ~e~lksL~eG-VeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                             .+| |+||+++|.++|+++||++|.    ..|++|||++||||++.+
T Consensus       143 -------~~g~l~~i~~~l~~vL~k~Gve~I~----~~Ge~FDP~~HEAV~~~~  185 (218)
T PRK14164        143 -------NEGPLKAFSDKLTNVLAGLKVEKFG----EEGDAFDPEIHEAVQDLS  185 (218)
T ss_pred             -------cccHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhHhheeeeec
Confidence                   133 789999999999999999873    358899999999998865

>PRK14142 heat shock protein GrpE; Provisional

Probab=99.94  E-value=1.8e-26  Score=212.73  Aligned_cols=105  Identities=14%  Similarity=0.157  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCchhhHH
Q 020610          191 KNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLK  270 (323)
Q Consensus       191 leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~~e~lk  270 (323)
                      +.+++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+....                  
T Consensus        45 ~~~e~~elkdk~lR~~AEfEN~RKR~erE~e~~~~~A~e~~~kdLLpVlDnLERAL~~~~~~------------------  106 (223)
T PRK14142         45 TEDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERARKHGDLE------------------  106 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHhHHHHHHhccccc------------------
Confidence            34667788999999999999999999999999999999999999999999999999875421                  


Q ss_pred             hHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          271 SLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       271 sL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                        .++|+||+++|.++|+++||++|.    ..|++|||++||||++..-
T Consensus       107 --~~~v~~I~kqL~~iLek~GVe~I~----~~Ge~FDP~~HEAv~~ve~  149 (223)
T PRK14142        107 --SGPLKSVADKLDSALTGLGLVAFG----AEGEDFDPVLHEAVQHEGD  149 (223)
T ss_pred             --cHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCChhhhceeeeecC
Confidence              035889999999999999999873    3588999999999987653

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=99.91  E-value=4.3e-24  Score=181.62  Aligned_cols=105  Identities=41%  Similarity=0.543  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCCCCCCCCchhhHHhHHHH
Q 020610          196 KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEG  275 (323)
Q Consensus       196 eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~s~d~~~~~e~lksL~eG  275 (323)
                      ++++++++|++|||+|||+|+.+|++++++||+++|+++||||+|||+||+++...+              +.++.+.+|
T Consensus         2 ~~~~~~~~r~~ae~~N~rkr~~~e~~~~~~~~~~~~~~~ll~v~D~le~a~~~~~~~--------------~~~~~~~~g   67 (137)
T cd00446           2 EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE--------------EELKNLVEG   67 (137)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------------chHHHHHHH
Confidence            467899999999999999999999999999999999999999999999999987541              246789999


Q ss_pred             HHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          276 VEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       276 VeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                      |+||+++|.++|+++||++|.    ..|++|||++|+||+..+
T Consensus        68 ~~~i~~~l~~~L~~~Gv~~i~----~~g~~FDp~~Heav~~~~  106 (137)
T cd00446          68 VEMTLKQLLDVLEKHGVEKIE----PEGEPFDPNLHEAVMQVP  106 (137)
T ss_pred             HHHHHHHHHHHHHHCCCEEEC----CCCCCCCHHHheeeeeec
Confidence            999999999999999999873    356799999999998765

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.89  E-value=1e-23  Score=181.86  Aligned_cols=126  Identities=33%  Similarity=0.390  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCC
Q 020610          178 VKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKID  257 (323)
Q Consensus       178 ~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d  257 (323)
                      ...+..++.+++.++++++++++++.|+.|+|+||++|++++.+++++++.++|+++||||+|+|+||+.+....     
T Consensus        10 ~~~~~~~~~~l~~l~~~~~~l~~~~~r~~ae~en~~~r~~~e~~~~~~~~~~~~~~~ll~v~D~l~~a~~~~~~~-----   84 (165)
T PF01025_consen   10 DEEIEELEEELEELEKEIEELKERLLRLQAEFENYRKRLEKEKEEAKKYALEKFLKDLLPVLDNLERALEAAKSN-----   84 (165)
T ss_dssp             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC-SHH-----
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----
Confidence            345556667788889999999999999999999999999999999999999999999999999999999987421     


Q ss_pred             CCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccccC
Q 020610          258 PSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLILG  321 (323)
Q Consensus       258 ~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~~  321 (323)
                               +....+.+||+||+++|.++|+++||++|.    +.|.+|||++|+||...+-.+
T Consensus        85 ---------~~~~~~~~g~~~~~~~l~~~L~~~Gv~~i~----~~G~~FDp~~heav~~~~~~~  135 (165)
T PF01025_consen   85 ---------EEEESLLEGLEMILKQLEDILEKNGVEEIE----PVGEPFDPNLHEAVETVPDPD  135 (165)
T ss_dssp             ---------CTCHHHHHHHHHHHHHHHHHHHTTTEEEE------TSSB--TTTEEEEEEECSSS
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHHCCCEecC----CCCCCCCHHHheeheecCcCC
Confidence                     224689999999999999999999999983    338899999999999877554

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PRK14143 heat shock protein GrpE; Provisional

Probab=93.84  E-value=1.2  Score=42.38  Aligned_cols=62  Identities=16%  Similarity=0.125  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          174 RDDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       174 ~deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      ..+|...++.++++++.++.++    +++.+--.|+..|.+++++......-...--.+.+|-+.|
T Consensus        69 ~~~l~~el~~l~~e~~elkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl  134 (238)
T PRK14143         69 LAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERAR  134 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            4456667777777777766654    4566667788889999998887777666666666665554

>PRK14163 heat shock protein GrpE; Provisional

Probab=91.93  E-value=4  Score=38.52  Aligned_cols=61  Identities=13%  Similarity=0.124  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          175 DDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       175 deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      ++|...+.++++++..++..+    +++.+--.|+..|.+++++......-...--.+.+|-+.|
T Consensus        43 ~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl  107 (214)
T PRK14163         43 AGLTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAR  107 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHH
Confidence            445556666666666655544    4566666788888888888877766555544445544443

>PRK14155 heat shock protein GrpE; Provisional

Probab=91.92  E-value=3.4  Score=38.64  Aligned_cols=61  Identities=16%  Similarity=0.198  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          175 DDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       175 deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      +++...++++++++++++.++    +++.+--.|+..|.+++++......-...--.+.+|-+.|
T Consensus        16 ~~l~~~l~~le~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl   80 (208)
T PRK14155         16 DDAAQEIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRAT   80 (208)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHH
Confidence            445556666666666655554    4566666788888988888887776665544445554443

>PRK14154 heat shock protein GrpE; Provisional

Probab=91.62  E-value=4  Score=38.27  Aligned_cols=63  Identities=14%  Similarity=0.080  Sum_probs=37.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          173 SRDDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       173 s~deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      ..++|...+++++++++.++..+    +++.+--.|+..|.+.++++.....-...--.+.+|-+.|
T Consensus        53 ~~~~l~~el~~le~e~~elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL  119 (208)
T PRK14154         53 SREKLEGQLTRMERKVDEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGL  119 (208)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHH
Confidence            34445555556665555555544    4555555678888888888877666555544555554444

>PRK14147 heat shock protein GrpE; Provisional

Probab=90.29  E-value=4.2  Score=36.83  Aligned_cols=59  Identities=7%  Similarity=0.058  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          177 LVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       177 L~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      +...+++++++++.++..+    +++.+--.|+..|.++++++.....-...--.+.+|-+.|
T Consensus        23 l~~~l~~l~~e~~elkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl   85 (172)
T PRK14147         23 LKAEVESLRSEIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGL   85 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence            4455555565665555544    4566666788899999988887666555544444444443

>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication

Probab=89.48  E-value=1.1  Score=37.94  Aligned_cols=48  Identities=19%  Similarity=0.204  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          174 RDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAE  221 (323)
Q Consensus       174 ~deL~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~E  221 (323)
                      ..++...+..+-+++..++.++.++.+.-.++.-|-+++|+|+.+...
T Consensus        10 l~~le~~l~~l~~~~~~LK~~~~~l~EEN~~L~~EN~~Lr~~l~~~~~   57 (107)
T PF06156_consen   10 LDQLEQQLGQLLEELEELKKQLQELLEENARLRIENEHLRERLEELEQ   57 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            345566666666677777777777777777788888889998877655

SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.

>PRK14162 heat shock protein GrpE; Provisional

Probab=87.81  E-value=12  Score=34.83  Aligned_cols=58  Identities=14%  Similarity=0.090  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          177 LVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA  234 (323)
Q Consensus       177 L~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakd  234 (323)
                      |...++.++++++.++.++    +++.+--.|+..|.++.++......-...--.+.+|-+.
T Consensus        44 l~~~l~~l~~e~~elkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerA  105 (194)
T PRK14162         44 LEKEIADLKAKNKDLEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERA  105 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHH
Confidence            3344444444444444433    345555567778888888887665554444444444443

>PRK14139 heat shock protein GrpE; Provisional

Probab=87.48  E-value=12  Score=34.53  Aligned_cols=61  Identities=15%  Similarity=0.101  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          175 DDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       175 deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      +.+...++++++++.+++.++    +++.+--.|+..|.+++++......-...--.+.+|-+.|
T Consensus        35 ~~l~~~l~~le~e~~elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl   99 (185)
T PRK14139         35 PALEAELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAAL   99 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHH
Confidence            334555556666665555544    4566666788888888888887766655555555554443

>PRK14157 heat shock protein GrpE; Provisional

Probab=87.40  E-value=6.8  Score=37.31  Aligned_cols=59  Identities=12%  Similarity=0.116  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          176 DLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA  234 (323)
Q Consensus       176 eL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakd  234 (323)
                      ++...+.++++++++++.++    +++.+--.|+..|.+.++++.....-...--.+.+|-+.
T Consensus        81 ~~~~~l~~le~e~~e~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRA  143 (227)
T PRK14157         81 DTLTPLGQAKKEAAEYLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRI  143 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence            34555555555555554443    456666678888888888888766555444444444443

>PRK14148 heat shock protein GrpE; Provisional

Probab=87.37  E-value=10  Score=35.24  Aligned_cols=62  Identities=18%  Similarity=0.161  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          174 RDDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       174 ~deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      .+.+...+++++++++.++..+    +++.+--.|+..|.+..++......-...-=.+.+|-+.|
T Consensus        42 ~~~l~~~l~~l~~e~~elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl  107 (195)
T PRK14148         42 LERAKDTIKELEDSCDQFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQAL  107 (195)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHH
Confidence            3445666666666666665554    4566666788889999888887766655555555554443

>PRK14158 heat shock protein GrpE; Provisional

Probab=87.15  E-value=14  Score=34.26  Aligned_cols=62  Identities=18%  Similarity=0.116  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          174 RDDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       174 ~deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      ...|...++++++++..++.++    +++.+--.|+..|.+++++......-...--.+.+|-+.|
T Consensus        42 ~~~le~~l~~le~e~~el~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl  107 (194)
T PRK14158         42 IKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERAL  107 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHH
Confidence            3455566666666666655544    4566666788888888888877666655555555554443

>PRK14151 heat shock protein GrpE; Provisional

Probab=86.55  E-value=13  Score=33.90  Aligned_cols=58  Identities=16%  Similarity=0.216  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          177 LVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA  234 (323)
Q Consensus       177 L~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakd  234 (323)
                      +...++++++++++++..+    +++.+--.|+..|.+++++......-...--.+.+|-+.
T Consensus        25 l~~~i~~le~e~~el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerA   86 (176)
T PRK14151         25 LTARVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERG   86 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHH
Confidence            3444455555555544443    355555678888888888887666555444444444433

>PRK14144 heat shock protein GrpE; Provisional

Probab=85.68  E-value=17  Score=34.03  Aligned_cols=60  Identities=15%  Similarity=0.121  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          176 DLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       176 eL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      ++...++++++++++++..+    +++.+--.|+..|.++.++......-...--.+.+|-+.|
T Consensus        49 ~l~~~i~~le~e~~elkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl  112 (199)
T PRK14144         49 ALEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQAL  112 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHH
Confidence            34444555555555544443    4555666788888888888887766655555555554443

>PTZ00464 SNF-7-like protein; Provisional

Probab=85.46  E-value=26  Score=32.81  Aligned_cols=105  Identities=10%  Similarity=0.078  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhc
Q 020610          175 DDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEM-ENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENF  253 (323)
Q Consensus       175 deL~~~laelEeeL~~leeEleElkDkllRa~AEf-ENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~  253 (323)
                      ..|.+.+..++.++..++.|++.+++.+.....-- ...|+|..+-...-+  -.++-+..+...++||+.....+... 
T Consensus        21 ~~l~~r~~~l~kKi~~ld~E~~~ak~~~k~~~~~~~~~~K~~Al~~LK~KK--~~E~ql~~l~~q~~nleq~~~~ie~a-   97 (211)
T PTZ00464         21 KRIGGRSEVVDARINKIDAELMKLKEQIQRTRGMTQSRHKQRAMQLLQQKR--MYQNQQDMMMQQQFNMDQLQFTTESV-   97 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            34555666666666666666666665554332211 224555444443322  23555777777888888776655432 


Q ss_pred             ccCCCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCccc
Q 020610          254 LKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSH  295 (323)
Q Consensus       254 ~~~d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I  295 (323)
                                   ..-..++.++....+.|.++.++.+|..|
T Consensus        98 -------------~~~~~vv~amk~g~kaLK~~~k~i~id~V  126 (211)
T PTZ00464         98 -------------KDTKVQVDAMKQAAKTLKKQFKKLNVDKV  126 (211)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence                         11245777777777888888888777654

>PRK14145 heat shock protein GrpE; Provisional

Probab=83.96  E-value=23  Score=32.99  Aligned_cols=60  Identities=15%  Similarity=0.117  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          176 DLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       176 eL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      .|...+++++++++.++..+    +++.+--.|+..|.+.++++.....-...-=.+.+|-+.|
T Consensus        49 ~l~~~l~~le~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl  112 (196)
T PRK14145         49 ELKQKLQQKEVEAQEYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERAL  112 (196)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHH
Confidence            34555555555555554433    4566666788888888888887766665555555554444

>PRK14146 heat shock protein GrpE; Provisional

Probab=82.62  E-value=30  Score=32.58  Aligned_cols=57  Identities=14%  Similarity=0.188  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          178 VKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKA  234 (323)
Q Consensus       178 ~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakd  234 (323)
                      ...+++++++++.++..+    +++.+--.|+..|.+++++......-...-=.+.+|-+.
T Consensus        60 ~~~l~~l~~e~~el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerA  120 (215)
T PRK14146         60 QKELDNAKKEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERV  120 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHH
Confidence            334444444444444333    456666678888889888888776666555555555444

>KOG2911 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.16  E-value=39  Score=35.23  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=36.2

Q ss_pred             CCCchhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          163 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSF  206 (323)
Q Consensus       163 ~~~~~se~~ls~deL~~~laelEeeL~~leeEleElkDkllRa~  206 (323)
                      ++...++.+.+.-+|....+.+..+++-|++++++.++++.++.
T Consensus       224 ~~~~it~~D~~V~~L~~~~~~L~kqie~L~qeie~~~~~~r~~~  267 (439)
T KOG2911|consen  224 DASIITEIDGSVADLIQARAKLAKQIEFLEQEIEKSKEKLRQAL  267 (439)
T ss_pred             cccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34446778888888999999999999999999999998887544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	323
4ani_A	213	Structural Basis For The Intermolecular Communicati		9e-07
1dkg_A	197	Crystal Structure Of The Nucleotide Exchange Factor		6e-06

>pdb|4ANI|A Chain A, Structural Basis For The Intermolecular Communication Between Dnak And Grpe In The Dnak Chaperone System From Geobacillus Kaustophilus Hta426 Length = 213

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 195 MKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFL 254
           + +M+ + LR +A+ EN + RT +E E ++K+  Q+ A  LL V DN  RA        L
Sbjct: 75  LSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERA--------L 126
Query: 255 KIDPSNDTAGAVPLLKSLLEGVEMTEKQL 283
           KI+  N+ A      KS+L+G+EM  + L
Sbjct: 127 KIETDNEQA------KSILQGMEMVYRSL 149

>pdb|1DKG|A Chain A, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 197

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 199 QDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP 258
           +D +LR  AEMEN++ RT  + E + KFA++ F   LL V D+L RA  V        D 
Sbjct: 59  RDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVA-------DK 111
Query: 259 SNDTAGAVPLLKSLLEGVEMTEKQLGEV--KFYYCFPSHVSASLPP 302
           +N      P + +++E +E+T K + +V  KF     +  +  L P
Sbjct: 112 AN------PDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDP 151

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	323
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	6e-25
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	1e-23
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	4e-23
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	2e-04

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1 Length = 197

 Score = 98.6 bits (246), Expect = 6e-25
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 13/134 (9%)

Query: 153 VSKQTAFSDSDSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENV 212
             ++      +     E E S + +    ++   L     E   + +D +LR  AEMEN+
Sbjct: 13  APEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENL 72

Query: 213 KDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSL 272
           + RT  + E + KFA++ F   LL V D+L RA        L++    +       + ++
Sbjct: 73  RRRTELDIEKAHKFALEKFINELLPVIDSLDRA--------LEVADKANPD-----MSAM 119

Query: 273 LEGVEMTEKQLGEV 286
           +E +E+T K + +V
Sbjct: 120 VEDIELTLKSMLDV 133

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus} Length = 213

 Score = 95.6 bits (238), Expect = 1e-23
 Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 17/167 (10%)

Query: 120 SDEGMEATDRTKESGFDSKPQSTVSQSNKRRRRVSKQTAFSDSDSDSESEIELSRDDLVK 179
             E       T +     +P    +               +  +  +E   +    + + 
Sbjct: 3   QGEKQVMEQATYDEPEREQPIEEEAAPQPEEESGGVPLEEAGGEEAAEPAEKAPTAEELA 62

Query: 180 LLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVA 239
             K +   L AK  EM+    + LR +A+ EN + RT +E E ++K+  Q+ A  LL V 
Sbjct: 63  AAKAQIAELEAKLSEME---HRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVL 119

Query: 240 DNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQLGEV 286
           DN  RA  +  +N                 KS+L+G+EM  + L + 
Sbjct: 120 DNFERALKIETDN--------------EQAKSILQGMEMVYRSLVDA 152

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus} Length = 177

 Score = 93.1 bits (232), Expect = 4e-23
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 16/124 (12%)

Query: 163 DSDSESEIELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAEN 222
           + + E+ +E   + + +  +  EE L A  EE+K ++DK LR  A+ +N + R   E + 
Sbjct: 3   ERNHENTLEKDLEAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKA 62

Query: 223 SKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDPSNDTAGAVPLLKSLLEGVEMTEKQ 282
            ++  +    +ALL V D+L RA    + +                 +S+ +GV      
Sbjct: 63  REREGVLKALRALLPVLDDLDRALEFAEAS----------------PESIRQGVRAIRDG 106

Query: 283 LGEV 286
              +
Sbjct: 107 FFRI 110

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 9/76 (11%)

Query: 166 SESE-IELSRDDLVKLLKEREELLMAKNEEMKQMQDKVLRSFAE-----MENVKDRTIRE 219
            E E I   R++  K L+E +       +E ++   K L  + +     +E  K    R 
Sbjct: 82  QEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINN-RI 140

Query: 220 AENSKKFAIQNFAKAL 235
           A+  K F  Q  A  +
Sbjct: 141 AD--KAFYQQPDADII 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	323
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	99.97
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	99.96
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	99.96
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	88.72
3swy_A	46	Cyclic nucleotide-gated cation channel alpha-3; co	83.16

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=99.97  E-value=6.9e-31  Score=239.34  Aligned_cols=123  Identities=24%  Similarity=0.337  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccCCC
Q 020610          179 KLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKIDP  258 (323)
Q Consensus       179 ~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~d~  258 (323)
                      ..++.++++|+.+++++++++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+++..      
T Consensus        59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~~------  132 (213)
T 4ani_A           59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETDN------  132 (213)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSCC------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccc------
Confidence            34566777888999999999999999999999999999999999999999999999999999999999876531      


Q ss_pred             CCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhcccc
Q 020610          259 SNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLI  319 (323)
Q Consensus       259 s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~  319 (323)
                              ..++.|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-
T Consensus       133 --------~~~~~l~eGvemi~k~l~~~L~k~Gv~~I~----~~Ge~FDP~~HeAv~~v~~  181 (213)
T 4ani_A          133 --------EQAKSILQGMEMVYRSLVDALKKEGVEAIE----AVGKPFDPYLHQAVMQAEA  181 (213)
T ss_dssp             --------STHHHHHHHHHHHHHHHHHHHHHTTEECCC----CSSSCCCTTTEEEEEEECC
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCCHHHceeeeeecC
Confidence                    246789999999999999999999999872    3588999999999998753

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=99.96  E-value=3.2e-30  Score=231.89  Aligned_cols=124  Identities=26%  Similarity=0.308  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      +...+++++++++++++   +++|+|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+....    
T Consensus        40 ~~~~~~~l~~~l~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~----  112 (197)
T 1dkg_A           40 RDEKVANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA----  112 (197)
T ss_dssp             HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC-------
T ss_pred             hHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccc----
Confidence            44566667766666654   47899999999999999999999999999999999999999999999999886431    


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHLIL  320 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~~~  320 (323)
                               ++.++.|++||+||+++|.++|+++||++|.    ..|.+|||++|+||++.+-.
T Consensus       113 ---------~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~----~~G~~FDP~~HeAv~~~~~~  163 (197)
T 1dkg_A          113 ---------NPDMSAMVEDIELTLKSMLDVVRKFGVEVIA----ETNVPLDPNVHQAIAMVESD  163 (197)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHTTTTEEEEC----CCSSBCCTTSEEEEEEEECS
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCCHHHhheeeeecCC
Confidence                     1235789999999999999999999999983    35889999999999987543

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=99.96  E-value=3e-31  Score=235.42  Aligned_cols=122  Identities=22%  Similarity=0.229  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHhhhhhhhcccC
Q 020610          177 LVKLLKEREELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKALLDVADNLGRASSVVKENFLKI  256 (323)
Q Consensus       177 L~~~laelEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdLLPVlDNLERALe~v~ee~~~~  256 (323)
                      +...+..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.     
T Consensus        17 ~~~e~~~l~~~~~~l~~e~~e~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~-----   91 (177)
T 3a6m_A           17 VGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEA-----   91 (177)
T ss_dssp             THHHHSSTTTSTTGGGGTSSSHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG-----
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhc-----
Confidence            344555566678888899999999999999999999999999999999999999999999999999999987653     


Q ss_pred             CCCCCCCCchhhHHhHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCccchhhhhccc
Q 020610          257 DPSNDTAGAVPLLKSLLEGVEMTEKQLGEVKFYYCFPSHVSASLPPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       257 d~s~d~~~~~e~lksL~eGVeMI~KqL~kVLek~GVe~I~g~k~dpge~FDP~~HEAV~q~~  318 (323)
                                 .++.|++||+||+++|.++|+++||++|.    +.|++|||++|+||++.+
T Consensus        92 -----------~~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~----~~Ge~FDP~~HeAv~~~~  138 (177)
T 3a6m_A           92 -----------SPESIRQGVRAIRDGFFRILAGLGVEEVP----GEGEAFDPRYHEAVGLLP  138 (177)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTCEECC----CTTSBCCTTTEEEEEEEE
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHHCCCEEeC----CCCCCCCHHHhhhhhccc
Confidence                       15789999999999999999999999882    368899999999998865

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=88.72  E-value=5.7  Score=36.02  Aligned_cols=61  Identities=18%  Similarity=0.175  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          175 DDLVKLLKEREELLMAKNEEM----KQMQDKVLRSFAEMENVKDRTIREAENSKKFAIQNFAKAL  235 (323)
Q Consensus       175 deL~~~laelEeeL~~leeEl----eElkDkllRa~AEfENyRKRteRE~EeakkfAiekfakdL  235 (323)
                      +.|...++++++++++++.++    +++.+--.|+..|.+.+++......-...--.+.+|=+.|
T Consensus        62 ~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl  126 (213)
T 4ani_A           62 AAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERAL  126 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            456677777777777766665    4566666788889999888876666555545555554444

>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}

Probab=83.16  E-value=6.7  Score=27.81  Aligned_cols=40  Identities=15%  Similarity=0.174  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020610          184 REELLMAKNEEMKQMQDKVLRSFAEMENVKDRTIREAENS  223 (323)
Q Consensus       184 lEeeL~~leeEleElkDkllRa~AEfENyRKRteRE~Eea  223 (323)
                      +|+++..++.-++-++.++.|+.|||+-...++++-+...
T Consensus         3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~l   42 (46)
T 3swy_A            3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQL   42 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5667777888889999999999999999988887766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	323
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	93.0

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=93.00  E-value=0.0068  Score=43.24  Aligned_cols=18  Identities=6%  Similarity=-0.034  Sum_probs=15.5

Q ss_pred             CCCCCCCccchhhhhccc
Q 020610          301 PPEHLYEPGCYGSMFNHL  318 (323)
Q Consensus       301 dpge~FDP~~HEAV~q~~  318 (323)
                      ..|++|||++||||++.+
T Consensus         6 ~~g~~FDP~~HeAv~~~~   23 (59)
T d1dkga1           6 ETNVPLDPNVHQAIAMVE   23 (59)
T ss_dssp             CCSSBCCTTSEEEEEEEE
T ss_pred             CCCCCCCHHHceEeeEec
Confidence            468899999999998865