Citrus Sinensis ID: 020615

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
ccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccHHHcHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccHHcccHHHHHHHHHHcccccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccEcc
MAFSFSSLMVTLALGFLVVFTgkssaqlstnfysktcpkLLNTVKSAVQSAVSKERRMGASLLRLHFHdcfvngcdgsillddtssftgektsgpninsargfEVVDDIKSkvekvcpgvvSCADILAIAARHSVAilggpswnvklgrrdsktASLAaansgvippptstlSNLINRFqakglsakdMVALSGAHTIGQARCVAFRNRiynesniessfaknrrgncpratgsgdnnlapldfqspnkfdnQYYKHLLnqkgllhsdqilfnggstdSLVSTYASNSKTFNSDFAAAMIKmgdispltgsigeirkncrrpn
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGektsgpninsargFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAilggpswnvkLGRRDSKTASLaaansgvippptstlSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNEsniessfaknrrgNCPRatgsgdnnlapLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGdispltgsigeirkncrrpn
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
****FSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVS*ERRMGASLLRLHFHDCFVNGCDGSILLDDT***************ARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLG***********************LSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNE************************************FDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDIS*****************
******SLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPR****GDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
***SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTS*PNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRR**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query323 2.2.26 [Sep-21-2011]
A7NY33321 Peroxidase 4 OS=Vitis vin yes no 0.981 0.987 0.756 1e-142
Q9LVL1325 Peroxidase 68 OS=Arabidop yes no 0.965 0.96 0.679 1e-126
Q9FLC0324 Peroxidase 52 OS=Arabidop no no 0.919 0.916 0.721 1e-125
P00434296 Peroxidase P7 OS=Brassica N/A no 0.916 1.0 0.723 1e-124
Q9LVL2316 Peroxidase 67 OS=Arabidop no no 0.978 1.0 0.670 1e-121
P22195316 Cationic peroxidase 1 OS= N/A no 0.944 0.965 0.659 1e-117
A5H452321 Peroxidase 70 OS=Zea mays N/A no 0.900 0.906 0.654 1e-112
Q02200322 Lignin-forming anionic pe N/A no 0.931 0.934 0.6 1e-105
Q0D3N0314 Peroxidase 2 OS=Oryza sat no no 0.885 0.910 0.619 1e-104
A2YPX3314 Peroxidase 2 OS=Oryza sat N/A no 0.885 0.910 0.616 1e-104
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function desciption
 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/320 (75%), Positives = 277/320 (86%), Gaps = 3/320 (0%)

Query: 4   SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLL 63
           SFS  +V +ALG L +F G SSAQLSTNFYSKTCPK+ +TVKS VQSAVSKERRMGASLL
Sbjct: 5   SFS--IVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLL 62

Query: 64  RLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSC 123
           RL FHDCFVNGCD S+LLDDTSSFTGE+T+ PN NS RG  V+D+IKS+VE VCPGVVSC
Sbjct: 63  RLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSC 122

Query: 124 ADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG 183
           ADI+AIAAR SV ILGGP W+VKLGRRDSKTASL+ AN+  IPPPTS+LSNLI++FQA+G
Sbjct: 123 ADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNN-IPPPTSSLSNLISKFQAQG 181

Query: 184 LSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLD 243
           LS +DMVALSGAHTIGQARC +FR RIYNE+NI+SSFAK R+ +CP A+GSGDNNLAPLD
Sbjct: 182 LSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPSASGSGDNNLAPLD 241

Query: 244 FQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMG 303
            Q+P  FDN YYK+L+NQKGLLHSDQ+L+NGGSTDS V TY +N KTF SDF A MIKMG
Sbjct: 242 LQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMG 301

Query: 304 DISPLTGSIGEIRKNCRRPN 323
           DI+PLTGS GEIRK+C + N
Sbjct: 302 DITPLTGSEGEIRKSCGKVN 321
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|Q9LVL2|PER67_ARATH Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|A5H452|PER70_MAIZE Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description
>sp|Q0D3N0|PER2_ORYSJ Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 Back     alignment and function description
>sp|A2YPX3|PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
224126945325 predicted protein [Populus trichocarpa] 0.990 0.984 0.768 1e-142
225434381321 PREDICTED: peroxidase 4 [Vitis vinifera] 0.981 0.987 0.756 1e-141
39777532330 peroxidase precursor [Quercus suber] 0.990 0.969 0.741 1e-139
39777536330 peroxidase precursor [Quercus suber] 0.978 0.957 0.741 1e-137
225448619321 PREDICTED: peroxidase 4 [Vitis vinifera] 0.981 0.987 0.723 1e-135
196051136330 putative secretory peroxidase [Catharant 0.972 0.951 0.733 1e-134
5381253321 peroxidase [Nicotiana tabacum] 0.972 0.978 0.726 1e-134
19698446320 class III peroxidase [Gossypium hirsutum 0.990 1.0 0.724 1e-133
356509058320 PREDICTED: peroxidase 52-like isoform 1 0.969 0.978 0.735 1e-133
224128886322 predicted protein [Populus trichocarpa] 0.984 0.987 0.721 1e-133
>gi|224126945|ref|XP_002319968.1| predicted protein [Populus trichocarpa] gi|222858344|gb|EEE95891.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 246/320 (76%), Positives = 272/320 (85%)

Query: 4   SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLL 63
           SFSS M    L FLV+FT  SSAQLSTNFYSK+CPK+   VKS VQSAVSKERRMGASL+
Sbjct: 6   SFSSYMAIFTLAFLVIFTSHSSAQLSTNFYSKSCPKVFGAVKSVVQSAVSKERRMGASLV 65

Query: 64  RLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSC 123
           RL FHDCFV GCDGSILL+DTSSFTGE+T+GPN NS RGF VV  IKS+VEKVCPG+VSC
Sbjct: 66  RLFFHDCFVKGCDGSILLEDTSSFTGEQTAGPNNNSVRGFNVVAKIKSQVEKVCPGIVSC 125

Query: 124 ADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG 183
           ADI+AIAAR S  ILGGP WNVKLGRRDSKTASL+AANSGVIPPPTSTLSNLINRF +KG
Sbjct: 126 ADIVAIAARDSTVILGGPFWNVKLGRRDSKTASLSAANSGVIPPPTSTLSNLINRFNSKG 185

Query: 184 LSAKDMVALSGAHTIGQARCVAFRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLD 243
           LS KDMVALSG+HTIGQARC +FR RIYNE+NI+SSFA  R+ NCP     GDN LAPLD
Sbjct: 186 LSVKDMVALSGSHTIGQARCTSFRARIYNETNIDSSFATTRQKNCPFPGPKGDNKLAPLD 245

Query: 244 FQSPNKFDNQYYKHLLNQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMG 303
            Q+P  FDN+YYK+L++QKGLLHSDQ+LFNGGSTDSLV TY+SN KTF+SDF  AMIKMG
Sbjct: 246 VQTPTSFDNKYYKNLISQKGLLHSDQVLFNGGSTDSLVRTYSSNPKTFSSDFVTAMIKMG 305

Query: 304 DISPLTGSIGEIRKNCRRPN 323
           DI PLTGS GEIRK C + N
Sbjct: 306 DIDPLTGSQGEIRKICSKRN 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434381|ref|XP_002269918.1| PREDICTED: peroxidase 4 [Vitis vinifera] gi|223635590|sp|A7NY33.1|PER4_VITVI RecName: Full=Peroxidase 4; Flags: Precursor gi|297745788|emb|CBI15844.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|39777532|gb|AAR31106.1| peroxidase precursor [Quercus suber] Back     alignment and taxonomy information
>gi|39777536|gb|AAR31108.1| peroxidase precursor [Quercus suber] Back     alignment and taxonomy information
>gi|225448619|ref|XP_002278996.1| PREDICTED: peroxidase 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|196051136|gb|ABV24960.2| putative secretory peroxidase [Catharanthus roseus] Back     alignment and taxonomy information
>gi|5381253|dbj|BAA82306.1| peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|19698446|gb|AAL93151.1|AF485265_1 class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|356509058|ref|XP_003523269.1| PREDICTED: peroxidase 52-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|224128886|ref|XP_002328991.1| predicted protein [Populus trichocarpa] gi|222839225|gb|EEE77576.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
TAIR|locus:2153529324 PRX52 "peroxidase 52" [Arabido 0.919 0.916 0.721 1.5e-113
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.975 0.996 0.677 1.9e-113
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.965 0.96 0.679 5.2e-113
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.962 0.968 0.546 5.9e-89
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.919 0.942 0.543 2.7e-84
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.925 0.892 0.536 1e-82
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.925 0.884 0.522 4.5e-82
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.913 0.852 0.530 5.8e-82
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.990 0.966 0.504 1.5e-81
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.975 0.963 0.490 8.7e-79
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 215/298 (72%), Positives = 250/298 (83%)

Query:    26 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTS 85
             AQL+TNFYS +CP LL+TV++AV+SAV+ E RMGAS+LRL FHDCFVNGCDGSILLDDTS
Sbjct:    28 AQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTS 87

Query:    86 SFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNV 145
             SFTGE+ + PN NSARGF V+D+IKS VEK CPGVVSCADILAIAAR SV  LGGP+WNV
Sbjct:    88 SFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNV 147

Query:   146 KLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVA 205
             K+GRRD++TAS AAANS  IP PTS+LS LI+ F A GLS +DMVALSGAHTIGQ+RC  
Sbjct:   148 KVGRRDARTASQAAANSN-IPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTN 206

Query:   206 FRNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLL 265
             FR RIYNE+NI ++FA  R+  CPRA+GSGD NLAPLD  +   FDN Y+K+L+ Q+GLL
Sbjct:   207 FRARIYNETNINAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLL 266

Query:   266 HSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 323
             HSDQ+LFNGGSTDS+V  Y++N  +FNSDF AAMIKMGDISPLTGS GEIRK C R N
Sbjct:   267 HSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q05855PER1_WHEAT1, ., 1, 1, ., 1, ., 70.55090.93180.9647N/Ano
P27337PER1_HORVU1, ., 1, 1, ., 1, ., 70.53100.95350.9777N/Ano
P22195PER1_ARAHY1, ., 1, 1, ., 1, ., 70.65900.94420.9651N/Ano
Q02200PERX_NICSY1, ., 1, 1, ., 1, ., 70.60.93180.9347N/Ano
A2YPX3PER2_ORYSI1, ., 1, 1, ., 1, ., 70.61640.88540.9108N/Ano
P80679PERA2_ARMRU1, ., 1, 1, ., 1, ., 70.52300.90400.9573N/Ano
P00434PERP7_BRARA1, ., 1, 1, ., 1, ., 70.72390.91641.0N/Ano
Q9LVL1PER68_ARATH1, ., 1, 1, ., 1, ., 70.67940.96590.96yesno
Q4W1I8PER1_ZINEL1, ., 1, 1, ., 1, ., 70.50150.95350.9595N/Ano
A7NY33PER4_VITVI1, ., 1, 1, ., 1, ., 70.75620.98140.9875yesno
Q9FLC0PER52_ARATH1, ., 1, 1, ., 1, ., 70.72140.91950.9166nono
A5H454PER66_MAIZE1, ., 1, 1, ., 1, ., 70.60400.87920.8875N/Ano
A5H453PER42_MAIZE1, ., 1, 1, ., 1, ., 70.58050.89470.9003N/Ano
A5H452PER70_MAIZE1, ., 1, 1, ., 1, ., 70.65410.90090.9065N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-170
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 9e-78
pfam00141180 pfam00141, peroxidase, Peroxidase 9e-74
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 8e-37
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 3e-26
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 4e-15
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 8e-15
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-13
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 1e-11
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-10
pfam00141180 pfam00141, peroxidase, Peroxidase 9e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  475 bits (1224), Expect = e-170
 Identities = 161/302 (53%), Positives = 211/302 (69%), Gaps = 12/302 (3%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           QLS  FYSK+CP   + V+S V++AV  + R+ A+LLRLHFHDCFV GCD S+LLD T++
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVK 146
            T EK + PN+ S RGF+V+DDIK+ +E  CPGVVSCADILA+AAR +V + GGPS+ V 
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 147 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 206
           LGRRD + +S  A + G +P P  ++S LI+ F +KGL+  D+VALSGAHTIG+A C +F
Sbjct: 120 LGRRDGRVSS--ANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 207 RNRIYNESN-------IESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLL 259
            +R+YN S        ++ ++A   R  CP   G  D+ L PLD  +PN FDN YYK+LL
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA--GGDDDTLVPLDPGTPNTFDNSYYKNLL 235

Query: 260 NQKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNC 319
             +GLL SDQ L +   T ++V+ YA+N   F  DFAAAM+KMG+I  LTGS GEIRKNC
Sbjct: 236 AGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNC 295

Query: 320 RR 321
           R 
Sbjct: 296 RV 297

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 323
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.55
PTZ00411333 transaldolase-like protein; Provisional 80.12
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-104  Score=756.73  Aligned_cols=292  Identities=42%  Similarity=0.758  Sum_probs=277.8

Q ss_pred             CccccCccccccCCccHHHHHHHHHHHHHHhccccccchhhhhhcccccccCCcceeccCCCCCCCcCCCCCCCCCcchh
Q 020615           24 SSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGF  103 (323)
Q Consensus        24 ~~~~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~lrg~  103 (323)
                      +.++|+++||++|||++|+||+++|++.+.++|+++|++|||+||||||+||||||||+++.   +||++++|. ++|||
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~---~Ek~a~~N~-~l~Gf   96 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN---TEKTALPNL-LLRGY   96 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc---ccccCCCCc-CcchH
Confidence            45679999999999999999999999999999999999999999999999999999998653   699999998 89999


Q ss_pred             hHHHHHHHHhhhhCCCCCCHHHHHHHhhhhHHhhcCCCccccccCCCCCCCccccccCCCCCCCCCCCHHHHHHHHHHCC
Q 020615          104 EVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKG  183 (323)
Q Consensus       104 ~~Id~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~~lP~p~~~~~~l~~~F~~~G  183 (323)
                      ++|+.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|.+..+. + ||.|+.++++|++.|+++|
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~-LP~p~~~~~~l~~~F~~~G  174 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-N-LPGFTDSIDVQKQKFAAKG  174 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-C-CcCCCCCHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999999999999877764 7 9999999999999999999


Q ss_pred             CCcccchhhccCccccccccccccccccC--------CCccChHHHHHhhccCCCCCCCCCCCCcCCCCCCCCccChHHH
Q 020615          184 LSAKDMVALSGAHTIGQARCVAFRNRIYN--------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYY  255 (323)
Q Consensus       184 l~~~dlVaLsGaHTiG~~hc~~f~~rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~D~~Tp~~FDn~Yy  255 (323)
                      |+.+|||+||||||||++||.+|.+||||        ||+||+.|+.+|++.||..++  ..+.+++|+.||.+|||+||
T Consensus       175 l~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~--~~~~~~lD~~Tp~~FDn~Yy  252 (324)
T PLN03030        175 LNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGD--GSRRIALDTGSSNRFDASFF  252 (324)
T ss_pred             CCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCC--CCccccCCCCCCcccccHHH
Confidence            99999999999999999999999999995        899999999999999996322  33467899999999999999


Q ss_pred             HHHHhcCCccccccccccCcchHHHHHhhccCc----hhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCCC
Q 020615          256 KHLLNQKGLLHSDQILFNGGSTDSLVSTYASNS----KTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  323 (323)
Q Consensus       256 ~~l~~~~gll~SD~~L~~d~~t~~~V~~~A~d~----~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  323 (323)
                      ++|+.++|+|+|||+|+.|++|+++|++||.|+    +.||++|++||+|||+|+|+||++|||||+|+++|
T Consensus       253 ~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        253 SNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            999999999999999999999999999999885    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PTZ00411 transaldolase-like protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
1sch_A294 Peanut Peroxidase Length = 294 1e-116
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 6e-88
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 4e-82
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 4e-79
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-74
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-74
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 3e-74
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-74
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 4e-74
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 4e-74
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 5e-74
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 8e-74
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-73
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-73
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-73
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-72
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-72
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-60
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-59
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-12
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 4e-12
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-12
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 5e-12
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 1e-11
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-11
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 3e-11
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-11
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 4e-11
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 9e-11
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 9e-11
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 1e-10
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-10
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-10
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 1e-10
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-10
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 5e-06
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 2e-05
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 5e-05
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 7e-05
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 8e-05
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 2e-04
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 2e-04
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 3e-04
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 3e-04
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 3e-04
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 4e-04
1bem_A291 Interaction Between Proximal And Distals Regions Of 6e-04
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 6e-04
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 8e-04
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 8e-04
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 9e-04
1mn1_A357 Manganese Peroxidase Substrate Binding Site Mutant 9e-04
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 9e-04
1bej_A291 Interaction Between Proximal And Distals Regions Of 9e-04
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 9e-04
1mn2_A357 Manganese Peroxidase Substrate Binding Site Mutant 9e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/296 (67%), Positives = 238/296 (80%), Gaps = 3/296 (1%)
Query: 28  LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSF 87
           LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+F
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 88  TGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKL 147
           TGEKT+GPN NS RGFEV+D IKS+VE +CPGVVSCADILA+AAR SV  LGG SWNV L
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 148 GRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAFR 207
           GRRDS TASL++ANS  +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AFR
Sbjct: 122 GRRDSTTASLSSANSD-LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180
Query: 208 NRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLHS 267
            RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLHS
Sbjct: 181 TRIYNESNIDPTYAKSLQANCPSV--GGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHS 238
Query: 268 DQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 323
           DQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 239 DQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 0.0
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 0.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 0.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 0.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 0.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 0.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 0.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-110
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-84
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 7e-80
2e39_A344 Peroxidase; heme protein, coordination geometry of 3e-71
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-70
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-69
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 1e-67
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 4e-24
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-18
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  544 bits (1404), Expect = 0.0
 Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 3/297 (1%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           +LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVK 146
           FTGEKT+GPN NS RGFEV+D IKS+VE +CPGVVSCADILA+AAR SV  LGG SWNV 
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 147 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 206
           LGRRDS TASL++ANS  +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AF
Sbjct: 121 LGRRDSTTASLSSANSD-LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179

Query: 207 RNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLH 266
           R RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLH
Sbjct: 180 RTRIYNESNIDPTYAKSLQANCPS--VGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLH 237

Query: 267 SDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 323
           SDQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 238 SDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.7e-107  Score=772.97  Aligned_cols=295  Identities=44%  Similarity=0.716  Sum_probs=282.9

Q ss_pred             cCccccccCCccHHHHHHHHHHHHHHhccccccchhhhhhcccccccCCcceeccCCCCCCCcCCCCCCCCCcchhhHHH
Q 020615           28 LSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVD  107 (323)
Q Consensus        28 l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~lrg~~~Id  107 (323)
                      |+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||++++++.+||++++|.+++|||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999888889999999987899999999


Q ss_pred             HHHHHhhhhCCCCCCHHHHHHHhhhhHHhhcCCCccccccCCCCCCCccccccCCCCCCCCCCCHHHHHHHHHHCCCCcc
Q 020615          108 DIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAK  187 (323)
Q Consensus       108 ~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  187 (323)
                      .||++||++||++||||||||||||+||+++|||.|+|++||+|++++....++.+ ||+|+.++++|++.|++|||+++
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~-lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQ-IPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHH-SCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccC-CCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998777777 99999999999999999999999


Q ss_pred             cchhhccCccccccccccccccccC-------CCccChHHHHHhhccCCCCCCCCCCCCcCCCCCCCCccChHHHHHHHh
Q 020615          188 DMVALSGAHTIGQARCVAFRNRIYN-------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLN  260 (323)
Q Consensus       188 dlVaLsGaHTiG~~hc~~f~~rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~  260 (323)
                      ||||||||||||++||.+|.+||||       ||+||+.|++.|++.||.+++..+++.+++|+.||.+|||+||++|+.
T Consensus       161 d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~  240 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQL  240 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHh
Confidence            9999999999999999999999986       899999999999999997522013456899999999999999999999


Q ss_pred             cCCccccccccccCcchHHHHHhhccCchhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCCC
Q 020615          261 QKGLLHSDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  323 (323)
Q Consensus       261 ~~gll~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  323 (323)
                      ++|||+|||+|+.|++|+++|++||.||+.||++|++||+||++|||+||.+|||||+|++||
T Consensus       241 ~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          241 TLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             CcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999999999999999999999999999999999999998
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 323
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-129
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-129
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-127
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-122
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-121
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-121
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-70
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-69
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-68
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-54
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 5e-50
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-45
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 3e-07
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 1e-05
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 6e-04
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  369 bits (947), Expect = e-129
 Identities = 198/297 (66%), Positives = 238/297 (80%), Gaps = 3/297 (1%)

Query: 27  QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSS 86
           +LS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 87  FTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVK 146
           FTGEKT+GPN NS RGFEV+D IKS+VE +CPGVVSCADILA+AAR SV  LGG SWNV 
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 147 LGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSGAHTIGQARCVAF 206
           LGRRDS TASL++AN   +P P   LS LI+ F  KG + K++V LSGAHTIGQA+C AF
Sbjct: 121 LGRRDSTTASLSSAN-SDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179

Query: 207 RNRIYNESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLLNQKGLLH 266
           R RIYNESNI+ ++AK+ + NCP     GD NL+P D  +PNKFDN YY +L N+KGLLH
Sbjct: 180 RTRIYNESNIDPTYAKSLQANCPSV--GGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLH 237

Query: 267 SDQILFNGGSTDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN 323
           SDQ LFNG STDS V+ Y++N+ TFN+DF  AMIKMG++SPLTG+ G+IR NCR+ N
Sbjct: 238 SDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=7.8e-103  Score=741.27  Aligned_cols=294  Identities=49%  Similarity=0.864  Sum_probs=283.7

Q ss_pred             ccCccccccCCccHHHHHHHHHHHHHHhccccccchhhhhhcccccccCCcceeccCCCCCCCcCCCCCCCCCcchhhHH
Q 020615           27 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVV  106 (323)
Q Consensus        27 ~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~lrg~~~I  106 (323)
                      ||+.+||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||+++.++.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999988888999999999788999999


Q ss_pred             HHHHHHhhhhCCCCCCHHHHHHHhhhhHHhhcCCCccccccCCCCCCCccccccCCCCCCCCCCCHHHHHHHHHHCCCCc
Q 020615          107 DDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSA  186 (323)
Q Consensus       107 d~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  186 (323)
                      |.||++||..||++||||||||||||+||+.+|||.|+|++||+|+++|+...+..+ ||.|+.++++|+++|++||||.
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~-lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQN-LPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHH-SCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCcccccccccc-CCCCCCCHHHHHHHHHHcCCCH
Confidence            999999999999999999999999999999999999999999999999988777677 9999999999999999999999


Q ss_pred             ccchhhccCccccccccccccccccC-------CCccChHHHHHhhccCCCCCCCCCCCCcCCCCCCCCccChHHHHHHH
Q 020615          187 KDMVALSGAHTIGQARCVAFRNRIYN-------ESNIESSFAKNRRGNCPRATGSGDNNLAPLDFQSPNKFDNQYYKHLL  259 (323)
Q Consensus       187 ~dlVaLsGaHTiG~~hc~~f~~rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~  259 (323)
                      +|||||+||||||++||.+|.+|+|+       ||.+|+.|+..|++.||.++.  ..+.+++|+.||.+|||+||++++
T Consensus       160 ~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~--~~~~~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNAT--GDNLTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCS--SCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCC--CCcccccCCCCCCccccHHHHHHh
Confidence            99999999999999999999999985       899999999999999998654  556788999999999999999999


Q ss_pred             hcCCccccccccccCc--chHHHHHhhccCchhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCCC
Q 020615          260 NQKGLLHSDQILFNGG--STDSLVSTYASNSKTFNSDFAAAMIKMGDISPLTGSIGEIRKNCRRPN  323 (323)
Q Consensus       260 ~~~gll~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  323 (323)
                      .++|+|+|||+|+.||  +|+++|++||+||++|+++|++||+||++||||||.+|||||+|+++|
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999999996  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure