Citrus Sinensis ID: 020687

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHSHSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCTYD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEccccEEEEEEEccEEEEEEccEEEEEcccccEEEcccccEEEEEEEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEEEEEcEEEccEEEEEEEEEEEEccccccccEEccccEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEccccEEEEEEccccEEEEEccEEEEcccccccEccccccEEEEEEEEEcEEEEcccccccccccccccccccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEccccccccEEcccccccc
Coil and Loop (DISEMBL)
mhaktdsevtslapssptrsprrpvyyvqspsrdshdgektttsfhstpvlspagspphshssigrhsressssrfsgslkpgsrkispndasrggqrkgqkRWNKECDVieeeglledeerrsglprrcYFLAFVLGFFLLFSLFSLILWgasksqkpkitmksinfehfkiqagsdfsgvatdmiTVNSTVKMIYRNtgtffgvhvtsnpldlsyseiTIASGAIRKFYQSRKSQKTVSVAVMgnkiplygsgaglsinsttgstshpvplnlnfVVRSRAYVLgklvkpkfykniacsitfdpkklnvpvslknsctyd
Flexible Loop (DISEMBL)
mhaktdsevtslapssptrsprrpVYYVqspsrdshdgeKTTTSFHSTPVLSPAGSPPHShssigrhsressssrfsgslkpgsrkispndasrggqrkgqkrwnkecdvieeeglledeerrsGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKiqagsdfsgvATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAcsitfdpkklnvpvslknsctyd
Low Complexity Region (SEG)
MHAKTDSEVTSLApssptrsprrpVYYVQSPSRDSHDGEKTTTSFHSTPVLspagspphshssigrhsressssrfsgslkpgsRKISPNDASRGGQRKGQKRWNKECDVIeeeglledeeRRSGLPRRCYflafvlgffllfslfslilWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCTYD
Disordered region (IsUnstruct)
*****************************************************************************************************************************LPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPV*********
Disordered Region (DISOPRED)
******S*******************YV*********************************************************************************************RRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIR**YQ**KSQKTVSVAVMGNKIPLYGS****************VPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPK********KNSCTY*
Disordered Region (DISEMBL)
***********************PVYYV****************************************************************************NKECDVIEEEGLLEDEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCTYD
Disordered Region (DISPRO)
*********************RRPVY******************************************************************************NKECDVIEEEGLLEDEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCT*D
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHSHSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCTYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
224063499	319	predicted protein [Populus trichocarpa]	0.990	1.0	0.860	1e-142
255538264	319	conserved hypothetical protein [Ricinus	0.990	1.0	0.835	1e-135
224137562	318	predicted protein [Populus trichocarpa]	0.987	1.0	0.829	1e-131
225458647	319	PREDICTED: uncharacterized protein LOC10	0.990	1.0	0.798	1e-130
449450239	319	PREDICTED: uncharacterized protein LOC10	0.981	0.990	0.763	1e-124
297846888	342	hypothetical protein ARALYDRAFT_473858 [	0.990	0.932	0.663	1e-115
356531176	297	PREDICTED: uncharacterized protein LOC10	0.916	0.993	0.691	1e-115
302142300	296	unnamed protein product [Vitis vinifera]	0.919	1.0	0.729	1e-114
18401556	342	uncharacterized protein [Arabidopsis tha	0.990	0.932	0.660	1e-114
356520627	297	PREDICTED: uncharacterized protein LOC10	0.916	0.993	0.694	1e-114

>gi|224063499|ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|222842900|gb|EEE80447.1| predicted protein [Populus trichocarpa]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/322 (86%), Positives = 295/322 (91%), Gaps = 3/322 (0%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRKISPNDASRGGQ KGQK+W KECDVIEEEGLLEDE
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQGKGQKQW-KECDVIEEEGLLEDE 119

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           ERR GLPRRCYFLAFVLGFF+LFSLFSLILWGASK QKPKITMKSI FE F+IQAGSD +
Sbjct: 120 ERRKGLPRRCYFLAFVLGFFILFSLFSLILWGASKPQKPKITMKSITFEQFRIQAGSDST 179

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GVATDMI+VNSTVKM YRN GTFFGV VTS PLDLSYSEITIASG I+KFYQSRKSQ+ V
Sbjct: 180 GVATDMISVNSTVKMTYRNKGTFFGVRVTSTPLDLSYSEITIASGNIKKFYQSRKSQRPV 239

Query: 241 SVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAC 300
           ++ V+ NKIPLYGSGAGLS  S+TG+T+ PVPL +NFVVRSRAYVLGKLVK KF + I C
Sbjct: 240 AIPVISNKIPLYGSGAGLS--SSTGTTTLPVPLKMNFVVRSRAYVLGKLVKTKFNRKIEC 297

Query: 301 SITFDPKKLNVPVSLKNSCTYD 322
             TFDPKKLNVP+SLK +CTYD
Sbjct: 298 DFTFDPKKLNVPISLKEACTYD 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538264|ref|XP_002510197.1| conserved hypothetical protein [Ricinus communis] gi|223550898|gb|EEF52384.1| conserved hypothetical protein [Ricinus communis]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/322 (83%), Positives = 295/322 (91%), Gaps = 3/322 (0%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLAPSSPTRSPRRPVY+VQSPSRDSHDGEKTTTSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYFVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRKISPNDAS+   RKGQK+W K+C VIEEEGLLEDE
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASKSSHRKGQKQW-KDCAVIEEEGLLEDE 119

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
            R  GLPRRCYFLAF+LGFF+LFS FSL+LWGASK QKPKITMK+I FEHF IQAGSD +
Sbjct: 120 AREKGLPRRCYFLAFLLGFFVLFSFFSLVLWGASKPQKPKITMKNIKFEHFSIQAGSDST 179

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GVATDMI++NSTVKMIYRNTGTFFGVHVTS P+DL YSEITIASGA++KFYQSRKSQ++V
Sbjct: 180 GVATDMISINSTVKMIYRNTGTFFGVHVTSTPVDLFYSEITIASGAVKKFYQSRKSQRSV 239

Query: 241 SVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAC 300
           +++VM NKIPLYGSGAG S  S+TG+T+ PVPL L+FV+RSRAYVLGKLVKPKFYK I C
Sbjct: 240 AISVMSNKIPLYGSGAGFS--SSTGTTALPVPLKLSFVLRSRAYVLGKLVKPKFYKRIEC 297

Query: 301 SITFDPKKLNVPVSLKNSCTYD 322
             TFDPKKLNVP+SLK SCTYD
Sbjct: 298 DFTFDPKKLNVPISLKKSCTYD 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137562|ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|222835472|gb|EEE73907.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/322 (82%), Positives = 296/322 (91%), Gaps = 4/322 (1%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRKISPNDASRGG RKGQK+W KECDVIEEEGLL+DE
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGG-RKGQKQW-KECDVIEEEGLLDDE 118

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           ERR GLPR+CYFLAFVLGFF+LFS FSLILWGASK QKPKITMKS+ FE F+IQAGSD +
Sbjct: 119 ERRKGLPRKCYFLAFVLGFFILFSFFSLILWGASKQQKPKITMKSVTFEQFRIQAGSDST 178

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GVATDMI+VNSTV+M YRN GTFFGVHVTS PLDLSYSEIT+ASG+I+KFYQSRKSQ++V
Sbjct: 179 GVATDMISVNSTVRMTYRNKGTFFGVHVTSTPLDLSYSEITLASGSIKKFYQSRKSQRSV 238

Query: 241 SVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAC 300
           +++++ +KIPLYGSGA  S  S+TG+ + PVPL +NFVVRS+AYVLGKLVKPKF K I C
Sbjct: 239 AISLISDKIPLYGSGAAFS--SSTGTATLPVPLKVNFVVRSKAYVLGKLVKPKFNKRIEC 296

Query: 301 SITFDPKKLNVPVSLKNSCTYD 322
             TFDPKKLNVP+SL+ +CTYD
Sbjct: 297 DFTFDPKKLNVPISLQKACTYD 318

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458647|ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254049 [Vitis vinifera]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/322 (79%), Positives = 291/322 (90%), Gaps = 3/322 (0%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLA SSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRKISPNDASRGG RKG+K W KEC VIEEEGLLEDE
Sbjct: 61  HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGHRKGEKPW-KECAVIEEEGLLEDE 119

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           ER+ GLPRRCYFLAFV+GFF+LFSLFSLILWGASK QKPKITMKSI FE F +QAGSD +
Sbjct: 120 ERQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDST 179

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GVATDM+++NSTVK+ +RNT TFFGVHVTS PLDLSYS + +ASG I+KFYQSRKS +++
Sbjct: 180 GVATDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASGTIKKFYQSRKSHRSL 239

Query: 241 SVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAC 300
           ++ +MG+KIPLYG GA  S++++TG+T+ P+PL L+F++RSRAYVLGKLVKPKFYK I C
Sbjct: 240 TIVLMGDKIPLYGGGA--SLSTSTGTTTEPLPLKLSFMLRSRAYVLGKLVKPKFYKRIEC 297

Query: 301 SITFDPKKLNVPVSLKNSCTYD 322
           S+  DPKKLNVP+SLK SCTY 
Sbjct: 298 SVNLDPKKLNVPLSLKKSCTYQ 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450239|ref|XP_004142871.1| PREDICTED: uncharacterized protein LOC101203977 [Cucumis sativus]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/321 (76%), Positives = 281/321 (87%), Gaps = 5/321 (1%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVL-SPAGSPPH 59
           MHAKTDSEVTS+APSSPTRSPRRPVY+VQSPSRDSHDGEKT TSFHSTPVL SP  SPPH
Sbjct: 1   MHAKTDSEVTSIAPSSPTRSPRRPVYFVQSPSRDSHDGEKTATSFHSTPVLTSPMDSPPH 60

Query: 60  SHSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLED 119
           S SS+GRHSRESSSSRFSGSLKPGSRKI+PND SRG  RKGQK W KECDVIEEEGLLED
Sbjct: 61  SRSSVGRHSRESSSSRFSGSLKPGSRKITPNDVSRGAHRKGQKPW-KECDVIEEEGLLED 119

Query: 120 EERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDF 179
           E+R   LPRRCY LAF+LGF +LFS+F+LILWGAS+  KPKITMKSI FE FKIQAGSDF
Sbjct: 120 EDRGKSLPRRCYVLAFILGFVVLFSMFALILWGASRPMKPKITMKSITFEQFKIQAGSDF 179

Query: 180 SGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKT 239
           +GVATDM +VNSTVK+I+RNTG+FFGVHV+  P+DLSYSEIT+ASG ++KFYQSRKS ++
Sbjct: 180 TGVATDMASVNSTVKLIFRNTGSFFGVHVSPTPVDLSYSEITVASGTVKKFYQSRKSHRS 239

Query: 240 VSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIA 299
           +++ V+G ++PLYGSGA LS   +TG+   P+PL L FV+RSRAYVLG+LVKPKFY++I 
Sbjct: 240 MTINVIGTRVPLYGSGASLS--GSTGTPETPLPLKLRFVIRSRAYVLGQLVKPKFYRHID 297

Query: 300 CSITFDPKKLNVPVSLKNSCT 320
           C I FD KKLNVP+SLKN CT
Sbjct: 298 CPIIFDSKKLNVPMSLKN-CT 317

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297846888|ref|XP_002891325.1| hypothetical protein ARALYDRAFT_473858 [Arabidopsis lyrata subsp. lyrata] gi|297337167|gb|EFH67584.1| hypothetical protein ARALYDRAFT_473858 [Arabidopsis lyrata subsp. lyrata]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/339 (66%), Positives = 265/339 (78%), Gaps = 20/339 (5%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLA SSP RSPRRPVYYVQSPSRDSHDGEKT TSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRK++PND S+     G+K+W KEC VIEEEGLL+D 
Sbjct: 61  HSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQW-KECAVIEEEGLLDDG 119

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           +R  G+PRRCY LAF++GFF+LF  FSLIL+GA+K QKPKIT+KSI FE  K+QAG D  
Sbjct: 120 DRDGGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPQKPKITVKSITFETLKVQAGQDAG 179

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GV TDMIT+N+T++M+YRNTGTFFGVHVTS P+DLS+S+I I SG++ KFYQSRKS++TV
Sbjct: 180 GVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVTKFYQSRKSERTV 239

Query: 241 SVAVMGNKIPLYGSGA-------------------GLSINSTTGSTSHPVPLNLNFVVRS 281
            V V+G KIPLYGSG+                      +     +   PVP+ L+FVVRS
Sbjct: 240 VVHVIGEKIPLYGSGSTLLPPAPPAPLPKPKKKKGAPVVIPDPPAPPAPVPMTLSFVVRS 299

Query: 282 RAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCT 320
           RAYVLGKLV+PKFYK I C I F+ K LN  +++  +CT
Sbjct: 300 RAYVLGKLVQPKFYKKIECDINFEHKNLNKHIAITKNCT 338

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531176|ref|XP_003534154.1| PREDICTED: uncharacterized protein LOC100817451 [Glycine max]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/324 (69%), Positives = 259/324 (79%), Gaps = 29/324 (8%)

Query: 1   MHAKTDSEVTSLAPSSPTRSP-RRPVYYVQSPSRDSHDGEKT-TTSFHSTPVLSPAGSPP 58
           MHAKTDSEVTSLA SSPTRSP RRP+YYVQSPSRDSHDGEKT TTSFHSTPVLSP     
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSP----- 55

Query: 59  HSHSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLE 118
              S+   HSR SSS+RFS   K  S  + P              W K+ DVIEEEGLL+
Sbjct: 56  ---SASPPHSRHSSSTRFSK--KDHSHSLKP--------------W-KQIDVIEEEGLLQ 95

Query: 119 DEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSD 178
            ++RR+GLPRRCYFLAFV+GF +LFS FSLILWGAS+  KPKIT++SI F+H ++QAGSD
Sbjct: 96  GDDRRNGLPRRCYFLAFVVGFLVLFSFFSLILWGASRPMKPKITIRSITFDHVRVQAGSD 155

Query: 179 FSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQK 238
            +GVATDMIT+NST+K  YRNTGTFFGVHVTS P++LSYS+I IA+G ++KFYQSR+SQ+
Sbjct: 156 ATGVATDMITLNSTLKFTYRNTGTFFGVHVTSTPVELSYSDIVIAAGNLKKFYQSRRSQR 215

Query: 239 TVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNI 298
            +SV+VMGNKIPLYGSGA LS  STTG  + PVPLNL+FV+RSRAYVLGKLVKPK+YK I
Sbjct: 216 LLSVSVMGNKIPLYGSGASLS--STTGVPTLPVPLNLSFVLRSRAYVLGKLVKPKYYKTI 273

Query: 299 ACSITFDPKKLNVPVSLKNSCTYD 322
            CSIT DPKKLN  +SLK SCTYD
Sbjct: 274 KCSITLDPKKLNAAISLKKSCTYD 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142300|emb|CBI19503.3| unnamed protein product [Vitis vinifera]

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 235/322 (72%), Positives = 268/322 (83%), Gaps = 26/322 (8%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLA SSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSSI                       SPNDASRGG RKG+K W KEC VIEEEGLLEDE
Sbjct: 61  HSSI-----------------------SPNDASRGGHRKGEKPW-KECAVIEEEGLLEDE 96

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           ER+ GLPRRCYFLAFV+GFF+LFSLFSLILWGASK QKPKITMKSI FE F +QAGSD +
Sbjct: 97  ERQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDST 156

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GVATDM+++NSTVK+ +RNT TFFGVHVTS PLDLSYS + +ASG I+KFYQSRKS +++
Sbjct: 157 GVATDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASGTIKKFYQSRKSHRSL 216

Query: 241 SVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNIAC 300
           ++ +MG+KIPLYG GA  S++++TG+T+ P+PL L+F++RSRAYVLGKLVKPKFYK I C
Sbjct: 217 TIVLMGDKIPLYGGGA--SLSTSTGTTTEPLPLKLSFMLRSRAYVLGKLVKPKFYKRIEC 274

Query: 301 SITFDPKKLNVPVSLKNSCTYD 322
           S+  DPKKLNVP+SLK SCTY 
Sbjct: 275 SVNLDPKKLNVPLSLKKSCTYQ 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401556|ref|NP_564495.1| uncharacterized protein [Arabidopsis thaliana] gi|12321012|gb|AAG50630.1|AC083835_15 unknown protein [Arabidopsis thaliana] gi|20466720|gb|AAM20677.1| unknown protein [Arabidopsis thaliana] gi|21595730|gb|AAM66126.1| unknown [Arabidopsis thaliana] gi|23198230|gb|AAN15642.1| unknown protein [Arabidopsis thaliana] gi|62320719|dbj|BAD95386.1| hypothetical protein [Arabidopsis thaliana] gi|332194001|gb|AEE32122.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/339 (66%), Positives = 262/339 (77%), Gaps = 20/339 (5%)

Query: 1   MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPAGSPPHS 60
           MHAKTDSEVTSLA SSP RSPRRPVYYVQSPSRDSHDGEKT TSFHSTPVLSP GSPPHS
Sbjct: 1   MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHS 60

Query: 61  HSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDE 120
           HSS+GRHSRESSSSRFSGSLKPGSRK++PND S+     G+K+W KEC VIEEEGLL+D 
Sbjct: 61  HSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQW-KECAVIEEEGLLDDG 119

Query: 121 ERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
           +R  G+PRRCY LAF++GFF+LF  FSLIL+GA+K  KPKIT+KSI FE  KIQAG D  
Sbjct: 120 DRDGGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAG 179

Query: 181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
           GV TDMIT+N+T++M+YRNTGTFFGVHVTS P+DLS+S+I I SG+++KFYQ RKS++TV
Sbjct: 180 GVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSERTV 239

Query: 241 SVAVMGNKIPLYGSGA-------------------GLSINSTTGSTSHPVPLNLNFVVRS 281
            V V+G KIPLYGSG+                            +   PVP+ L+FVVRS
Sbjct: 240 LVHVIGEKIPLYGSGSTLLPPAPPAPLPKPKKKKGAPVPIPDPPAPPAPVPMTLSFVVRS 299

Query: 282 RAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCT 320
           RAYVLGKLV+PKFYK I C I F+ K LN  + +  +CT
Sbjct: 300 RAYVLGKLVQPKFYKKIECDINFEHKNLNKHIVITKNCT 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520627|ref|XP_003528962.1| PREDICTED: uncharacterized protein LOC100811519 [Glycine max]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/324 (69%), Positives = 255/324 (78%), Gaps = 29/324 (8%)

Query: 1   MHAKTDSEVTSLAPSSPTRSP-RRPVYYVQSPSRDSHDGEKT-TTSFHSTPVLSPAGSPP 58
           MHAKTDSEVTSLA SSPTRSP RRP+YYVQSPSRDSHDGEKT TTSFHSTPVLSP     
Sbjct: 1   MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSP----- 55

Query: 59  HSHSSIGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLE 118
              S+   HSR SSS+RFS   K  S  + P              W K+ DVIEEEGLL+
Sbjct: 56  ---SASPPHSRHSSSTRFSK--KDHSHSLKP--------------W-KQIDVIEEEGLLQ 95

Query: 119 DEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSD 178
            ++  +GLPRRCYFLAFV+GF +LFS FSLILWGAS+  KPKI +KSI F+H ++QAGSD
Sbjct: 96  GDDHHNGLPRRCYFLAFVVGFLVLFSFFSLILWGASRPMKPKINIKSIKFDHVRVQAGSD 155

Query: 179 FSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQK 238
            +GVATDMIT+NST+K  YRNTGTFFGVHVTS P++LSYS+I IASG ++KFYQSR+SQ+
Sbjct: 156 ATGVATDMITLNSTLKFAYRNTGTFFGVHVTSTPVELSYSDIVIASGNMKKFYQSRRSQR 215

Query: 239 TVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNI 298
            VSVAVMGNKIPLYGSGA LS  STTG  + PV LNLNFV+RSRAYVLGKLVKPK+YK I
Sbjct: 216 LVSVAVMGNKIPLYGSGASLS--STTGVPTVPVLLNLNFVLRSRAYVLGKLVKPKYYKTI 273

Query: 299 ACSITFDPKKLNVPVSLKNSCTYD 322
            CSIT DPKKLN  +SLK SCTYD
Sbjct: 274 QCSITLDPKKLNAAISLKKSCTYD 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2825837	342	AT1G45688 "AT1G45688" [Arabido	0.798	0.751	0.515	9.5e-80
TAIR|locus:2160026	320	AT5G42860 "AT5G42860" [Arabido	0.506	0.509	0.527	1.8e-75
TAIR|locus:2064637	297	AT2G41990 "AT2G41990" [Arabido	0.503	0.545	0.479	7.6e-44
TAIR|locus:2132811	299	AT4G35170 "AT4G35170" [Arabido	0.524	0.565	0.494	2.9e-39
TAIR|locus:2103454	271	AT3G08490 "AT3G08490" [Arabido	0.509	0.605	0.232	5.1e-10
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.437	0.542	0.25	0.00024

TAIR|locus:2825837 AT1G45688 "AT1G45688" [Arabidopsis thaliana (taxid:3702)]

 Score = 648 (233.2 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
 Identities = 133/258 (51%), Positives = 157/258 (60%)

Query:     1 MHAKTDSEVTSLAXXXXXXXXXXXVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 60
             MHAKTDSEVTSLA           VYYVQSPSRDSHDGEKT TSFHSTPVL         
Sbjct:     1 MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHS 60

Query:    61 XXXXXXXXXXXXXXXXXXXXXXXXRKISPNDASRGGQRKGQKRWNKECDVIXXXXXXXXX 120
                                     RK++PND S+     G+K+W KEC VI         
Sbjct:    61 HSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQW-KECAVIEEEGLLDDG 119

Query:   121 XRRSGLPRRCYXXXXXXXXXXXXXXXXXXXWGASKSQKPKITMKSINFEHFKIQAGSDFS 180
              R  G+PRRCY                   +GA+K  KPKIT+KSI FE  KIQAG D  
Sbjct:   120 DRDGGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAG 179

Query:   181 GVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV 240
             GV TDMIT+N+T++M+YRNTGTFFGVHVTS P+DLS+S+I I SG+++KFYQ RKS++TV
Sbjct:   180 GVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSERTV 239

Query:   241 SVAVMGNKIPLYGSGAGL 258
              V V+G KIPLYGSG+ L
Sbjct:   240 LVHVIGEKIPLYGSGSTL 257

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2160026 AT5G42860 "AT5G42860" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.8e-75, Sum P(3) = 1.8e-75
 Identities = 87/165 (52%), Positives = 112/165 (67%)

Query:    95 GGQRKGQKRWNKECDVIXXXXXXXXXXR-RSGLPRRCYXXXXXXXXXXXXXXXXXXXWGA 153
             G +RKG     K+  +I          R +  LPRRCY                   + A
Sbjct:    73 GSKRKGHAG-EKQFAMIEEEGLLDDGDREQEALPRRCYVLAFIVGFSLLFAFFSLILYAA 131

Query:   154 SKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPL 213
             +K QKPKI++KSI FE  K+QAG D  G+ TDMIT+N+T++M+YRNTGTFFGVHVTS+P+
Sbjct:   132 AKPQKPKISVKSITFEQLKVQAGQDAGGIGTDMITMNATLRMLYRNTGTFFGVHVTSSPI 191

Query:   214 DLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGL 258
             DLS+S+ITI SG+I+KFYQSRKSQ+TV V V+G+KIPLYGSG+ L
Sbjct:   192 DLSFSQITIGSGSIKKFYQSRKSQRTVVVNVLGDKIPLYGSGSTL 236

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2064637 AT2G41990 "AT2G41990" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 81/169 (47%), Positives = 108/169 (63%)

Query:   151 WGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTS 210
             WGASKS  PK+T+K +      +QAG+D SGV TDM+++NSTV++ YRN  TFF VHVT+
Sbjct:   134 WGASKSYPPKVTVKGMLVRDLNLQAGNDLSGVPTDMLSLNSTVRIYYRNPSTFFAVHVTA 193

Query:   211 NPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHP 270
             +PL L YS + ++SG + KF   R  +  V   V G++IPLYG   G+S +  T S    
Sbjct:   194 SPLLLHYSNLLLSSGEMNKFTVGRNGETNVVTVVQGHQIPLYG---GVSFHLDTLS---- 246

Query:   271 VPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSC 319
             +PLNL  V+ S+AY+LG+LV  KFY  I CS T D   L   +SL  SC
Sbjct:   247 LPLNLTIVLHSKAYILGRLVTSKFYTRIICSFTLDANHLPKSISLLRSC 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2132811 AT4G35170 "AT4G35170" [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 84/170 (49%), Positives = 112/170 (65%)

Query:   151 WGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTS 210
             WG SKS  P  T+K +  E+  +Q+G+D SGV TDM+T+NSTV+++YRN  TFF VHVTS
Sbjct:   129 WGVSKSFAPIATLKEMVLENLNVQSGNDQSGVLTDMLTLNSTVRILYRNPATFFTVHVTS 188

Query:   211 NPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHP 270
              PL LSYS++ +ASG + +F Q RKS++ +   V G++IPLYG G               
Sbjct:   189 APLQLSYSQLILASGQMGEFSQRRKSERIIETKVFGDQIPLYG-GVPALFGQRAEPDQVV 247

Query:   271 VPLNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSLKNSCT 320
             +PLNL F +R+RAYVLG+LVK  F+ NI CSITF   KL   + L  SC+
Sbjct:   248 LPLNLTFTLRARAYVLGRLVKTTFHSNIKCSITFYGDKLGKTLDLSKSCS 297

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2103454 AT3G08490 "AT3G08490" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 39/168 (23%), Positives = 73/168 (43%)

Query:   153 ASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNP 212
             A++   P I+ +   F  F ++ G D  GV+T  +T N + K+I  N    FG+H+    
Sbjct:   103 ATQPPHPNISFRIGRFNQFMLEEGVDSHGVSTKFLTFNCSTKLIIDNKSNVFGLHIHPPS 162

Query:   213 LDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVP 272
             +   +  +  A     K Y       T  + +      +YG  AG  +N    S +  +P
Sbjct:   163 IKFFFGPLNFAKAQGPKLYGLSHESTTFQLYIATTNRAMYG--AGTEMNDMLLSRAG-LP 219

Query:   273 LNLNFVVRSRAYVLGKLVKPKFYKNIACSITFDPKKLNVPVSL-KNSC 319
             L L   + S   V+  ++ PK++  + C +    K+ +  V++ +  C
Sbjct:   220 LILRTSIISDYRVVWNIINPKYHHKVECLLLLADKERHSHVTMIREKC 267

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
 Identities = 38/152 (25%), Positives = 69/152 (45%)

Query:   176 GSDFSGV---ATDMITVNSTVKMIYRNTGTFFGVHVTS-NPLDLSYSEITIASGAIRKFY 231
             G   SG+   +T  I+ +  V +  RN     GV+    + +D+ Y+++ I++G +  FY
Sbjct:   111 GFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFY 170

Query:   232 QSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVK 291
             Q  K+   V + + G+KI L  SG    + +     + P  L +   V+ +    G +  
Sbjct:   171 QPAKNVTVVKLVLSGSKIQLT-SGMRKEMRNEVSKKTVPFKLKIKAPVKIK---FGSVKT 226

Query:   292 PKFYKNIACSITFDPKKLNVPVSL-KNSCTYD 322
                  N+ C +T D  KL  P  +    C++D
Sbjct:   227 WTMIVNVDCDVTVD--KLTAPSRIVSRKCSHD 256


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       249   0.00080  114 3  11 22  0.47    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  179 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.90u 0.10s 19.00t   Elapsed:  00:00:01
  Total cpu time:  18.90u 0.10s 19.00t   Elapsed:  00:00:01
  Start:  Fri May 10 04:09:39 2013   End:  Fri May 10 04:09:40 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0033011202 hypothetical protein (319 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
PLN03160	219	uncharacterized protein; Provisional	99.97
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.35
smart00769	100	WHy Water Stress and Hypersensitive response.	97.32
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	95.52
COG5608	161	LEA14-like dessication related protein [Defense me	94.37
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	93.72
PLN03160	219	uncharacterized protein; Provisional	92.92
PF15145	128	DUF4577: Domain of unknown function (DUF4577)	86.99
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	83.66

>PLN03160 uncharacterized protein; Provisional

Probab=99.97  E-value=2.4e-29  Score=231.24  Aligned_cols=169  Identities=10%  Similarity=0.182  Sum_probs=136.8

Q ss_pred             HHHHHHHHHhheeeeeeCCCCEEEEeeeEEEeEEeccCCCCCCccceeEEEEEEEEEEEecCCCeEEEEEcCceEEEEEc
Q 020687          139 FFLLFSLFSLILWGASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYS  218 (322)
Q Consensus       139 ~vlL~gl~~LIlWlv~RP~kP~fsV~s~~v~~fnv~~gsd~sgvpt~~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~  218 (322)
                      +++|+++++.++|+++|||.|+|+|.+++|++|++..+.    .+...++++++++|+++|||. +||+|+..++.++|+
T Consensus        47 ~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~----~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~~~~v~Y~  121 (219)
T PLN03160         47 LLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT----TLRPGTNITLIADVSVKNPNV-ASFKYSNTTTTIYYG  121 (219)
T ss_pred             HHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCC----CCceeEEEEEEEEEEEECCCc-eeEEEcCeEEEEEEC
Confidence            455577777889999999999999999999999997521    123356667788889999999 899999999999999


Q ss_pred             ceeeecCCCCcccccCCCeEEEEEEEEeeeeeccCCcccccccccCCCCcccEeEEEEEEEEEEEEEeeeEEcceeeEEE
Q 020687          219 EITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKLVKPKFYKNI  298 (322)
Q Consensus       219 ~~~lasg~lp~FYQ~~kstt~v~~~l~G~~vpL~gag~~L~~~~~~~~~~g~VpL~L~~~vrvR~~vlG~lv~~k~~~~V  298 (322)
                      |..+|.+.+|+|||++++++.+.+.+.....-+.. +..|..    |...|.|||+++.+++.|+++ |++.++++..++
T Consensus       122 g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~-~~~L~~----D~~~G~v~l~~~~~v~gkVkv-~~i~k~~v~~~v  195 (219)
T PLN03160        122 GTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLT----DISSGLLNMNSYTRIGGKVKI-LKIIKKHVVVKM  195 (219)
T ss_pred             CEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc-chhHHH----HhhCCeEEEEEEEEEEEEEEE-EEEEEEEEEEEE
Confidence            99999999999999999999999886543321222 344544    256889999999999999884 678899999999


Q ss_pred             EEEEEecCCCCCCCccc-cCCceeC
Q 020687          299 ACSITFDPKKLNVPVSL-KNSCTYD  322 (322)
Q Consensus       299 ~C~l~v~~~~~~~pi~l-~~sC~~~  322 (322)
                      +|++.|+...    ..+ ...|+++
T Consensus       196 ~C~v~V~~~~----~~i~~~~C~~~  216 (219)
T PLN03160        196 NCTMTVNITS----QAIQGQKCKRH  216 (219)
T ss_pred             EeEEEEECCC----CEEeccEeccc
Confidence            9999998532    355 6789764

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.35  E-value=1.8e-12  Score=102.65  Aligned_cols=99  Identities=23%  Similarity=0.346  Sum_probs=73.5

Q ss_pred             EEEEecCCCeEEEEEcCceEEEEEcceeee-cCCCCcccccCCCeEEEEEEEEeeeeeccCCcccccccccCCCCcccEe
Q 020687          194 KMIYRNTGTFFGVHVTSNPLDLSYSEITIA-SGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVP  272 (322)
Q Consensus       194 ~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~la-sg~lp~FYQ~~kstt~v~~~l~G~~vpL~gag~~L~~~~~~~~~~g~Vp  272 (322)
                      +|.++|||. |+|+|++.++.++|++..|| .+.+++|+|++++++++.+.+..+...|   ...+.+  .  . .+.++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~--~--~-~~~~~   71 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKD--L--L-AGRVP   71 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHH--H--H-HTTSC
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHh--h--h-ccccc
Confidence            478999999 99999999999999999999 7788999999999999999887776555   333333  1  2 34677


Q ss_pred             EEEEEEEEEEEEEeeeEEcceeeEEEEEE
Q 020687          273 LNLNFVVRSRAYVLGKLVKPKFYKNIACS  301 (322)
Q Consensus       273 L~L~~~vrvR~~vlG~lv~~k~~~~V~C~  301 (322)
                      +++.++++.++++++.....++++.++|.
T Consensus        72 ~~v~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   72 FDVTYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             eEEEEEEEEEEEEcccceeeeEEEeEEeE
Confidence            88888888888865544445555666653

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=97.32  E-value=0.0014  Score=52.89  Aligned_cols=60  Identities=18%  Similarity=0.246  Sum_probs=53.4

Q ss_pred             eEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCC-cccccCCCeEEEEEEEEe
Q 020687          186 MITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIR-KFYQSRKSQKTVSVAVMG  246 (322)
Q Consensus       186 ~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp-~FYQ~~kstt~v~~~l~G  246 (322)
                      .+...+.+++.+.|||.+ .+.|+.....++|++..||.|..+ ..-.+.++++.+.+.+.-
T Consensus        12 ~~~~~~~l~l~v~NPN~~-~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~   72 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPF-PIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTV   72 (100)
T ss_pred             ceEEEEEEEEEEECCCCC-ccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEe
Confidence            356778888999999995 999999999999999999999985 799999999999888776

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=95.52  E-value=0.17  Score=47.78  Aligned_cols=110  Identities=19%  Similarity=0.230  Sum_probs=63.6

Q ss_pred             eEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCCcc-cccCCCeEEEEEEEEeeeeeccCC-ccccccccc
Q 020687          186 MITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKF-YQSRKSQKTVSVAVMGNKIPLYGS-GAGLSINST  263 (322)
Q Consensus       186 ~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp~F-YQ~~kstt~v~~~l~G~~vpL~ga-g~~L~~~~~  263 (322)
                      .+.+|++-.+.+.|||= +-|.+....+++.|....+|.+.+... .-+.++.+.+...+.. .+..-.. ...+=.  .
T Consensus       121 ~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t-~i~~~~~yv~~~Ct--~  196 (238)
T PF07092_consen  121 TVQLNITNTLNISNPNF-YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT-TIGDENSYVYKYCT--W  196 (238)
T ss_pred             EEEEEEEEEEEccCCCE-EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE-EecCcchhHhHhhc--C
Confidence            57889998999999995 699999999999999999998866433 3344455444443332 1110000 011111  0


Q ss_pred             CCCCcccEeEEEEEEEEEEEEEeeeE--EcceeeEEEEEE
Q 020687          264 TGSTSHPVPLNLNFVVRSRAYVLGKL--VKPKFYKNIACS  301 (322)
Q Consensus       264 ~~~~~g~VpL~L~~~vrvR~~vlG~l--v~~k~~~~V~C~  301 (322)
                      ....-..+-|.+++++..- | +|--  ..-.-+..|+|.
T Consensus       197 ~~ikvH~i~l~~Q~Tvt~s-Y-L~H~eQ~s~e~y~yVDC~  234 (238)
T PF07092_consen  197 PKIKVHNIVLHMQGTVTVS-Y-LSHSEQLSLETYQYVDCG  234 (238)
T ss_pred             ccceEEEEEEEEEEEEEEE-E-EecccccceeeEEEEEec
Confidence            0012235667776666663 3 4421  122345678884

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=94.37  E-value=0.97  Score=40.13  Aligned_cols=59  Identities=20%  Similarity=0.236  Sum_probs=49.4

Q ss_pred             EEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCC-CcccccCCCeEEEEEEEEeee
Q 020687          189 VNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAI-RKFYQSRKSQKTVSVAVMGNK  248 (322)
Q Consensus       189 ~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~l-p~FYQ~~kstt~v~~~l~G~~  248 (322)
                      ..+-.++.++|||.+ -|-+......++-+|+.+|.|.. ..|.-+.++..++.+.+.-+.
T Consensus        50 ~EiV~t~KiyNPN~f-PipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~~d~  109 (161)
T COG5608          50 TEIVGTLKIYNPNPF-PIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLRLDN  109 (161)
T ss_pred             eEEEEEEEecCCCCc-ceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEEEEeh
Confidence            345567788999995 89999999899999999999965 669999999999998876554

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=93.72  E-value=0.24  Score=49.65  Aligned_cols=60  Identities=12%  Similarity=0.113  Sum_probs=40.2

Q ss_pred             eeeeCCCCEEEEeeeEEEeEEeccCCCCCCccceeEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeee
Q 020687          152 GASKSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIA  223 (322)
Q Consensus       152 lv~RP~kP~fsV~s~~v~~fnv~~gsd~sgvpt~~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~la  223 (322)
                      +++=-.||--.|+=+.|+|.-.++-         -|-+  .|.|.+.|||- |.|.++..++.||=+..-++
T Consensus       322 Fv~AttKpL~~v~v~~I~NVlaS~q---------ELmf--dl~V~A~NPn~-~~V~I~d~dldIFAKS~yvg  381 (387)
T PF12751_consen  322 FVFATTKPLTDVQVVSIQNVLASEQ---------ELMF--DLTVEAFNPNW-FTVTIDDMDLDIFAKSRYVG  381 (387)
T ss_pred             hhhhcCcccccceEEEeeeeeeccc---------eEEE--eeEEEEECCCe-EEEEeccceeeeEecCCccC
Confidence            3334456666777777777665441         2334  45677999997 59999999999985544343

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=92.92  E-value=3.1  Score=38.62  Aligned_cols=101  Identities=12%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             cCCCCceee-hhHHHHHHHHHHHHHHHhheeeeeeC--CCCEEEEeeeEEEe-------EEeccCCCCCCccceeEEEEE
Q 020687          122 RRSGLPRRC-YFLAFVLGFFLLFSLFSLILWGASKS--QKPKITMKSINFEH-------FKIQAGSDFSGVATDMITVNS  191 (322)
Q Consensus       122 ~~~~~~r~c-~~~~~ll~~vlL~gl~~LIlWlv~RP--~kP~fsV~s~~v~~-------fnv~~gsd~sgvpt~~Ls~n~  191 (322)
                      .++.+.+|| |++++++.++++++++++.++=.-+|  +--.++|+++.+..       +|+            .|.+++
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~------------tl~~~v   99 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNI------------TLIADV   99 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEE------------EEEEEE
Confidence            344577777 88888888888888888877777899  56678888887753       232            232322


Q ss_pred             E------EEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCCcccccCCCeEEE
Q 020687          192 T------VKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTV  240 (322)
Q Consensus       192 t------v~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp~FYQ~~kstt~v  240 (322)
                      +      +.+.+.  +....++|+...+    +...+..|..+++.+.+.+.+..
T Consensus       100 ~v~NPN~~~~~Y~--~~~~~v~Y~g~~v----G~a~~p~g~~~ar~T~~l~~tv~  148 (219)
T PLN03160        100 SVKNPNVASFKYS--NTTTTIYYGGTVV----GEARTPPGKAKARRTMRMNVTVD  148 (219)
T ss_pred             EEECCCceeEEEc--CeEEEEEECCEEE----EEEEcCCcccCCCCeEEEEEEEE
Confidence            2      234453  4457889988655    34567778888888888888854

>PF15145 DUF4577: Domain of unknown function (DUF4577)

Probab=86.99  E-value=0.68  Score=39.07  Aligned_cols=30  Identities=13%  Similarity=0.467  Sum_probs=25.3

Q ss_pred             ceeehhHHHHHHHHHHHHHHHhheeeeeeC
Q 020687          127 PRRCYFLAFVLGFFLLFSLFSLILWGASKS  156 (322)
Q Consensus       127 ~r~c~~~~~ll~~vlL~gl~~LIlWlv~RP  156 (322)
                      .|+.+|+++++++++-++++.++++|+++-
T Consensus        59 ~~~lffvglii~LivSLaLVsFvIFLiiQT   88 (128)
T PF15145_consen   59 SRSLFFVGLIIVLIVSLALVSFVIFLIIQT   88 (128)
T ss_pred             ceeehHHHHHHHHHHHHHHHHHHHHheeec
Confidence            355589999999999999999999998764

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=83.66  E-value=3.1  Score=35.60  Aligned_cols=36  Identities=17%  Similarity=0.419  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHHhhe--eeeeeCCCCEEEEeeeEEEe
Q 020687          135 FVLGFFLLFSLFSLIL--WGASKSQKPKITMKSINFEH  170 (322)
Q Consensus       135 ~ll~~vlL~gl~~LIl--Wlv~RP~kP~fsV~s~~v~~  170 (322)
                      |.+++++|++++.||+  |+.-+++.|.+.+.-.....
T Consensus         8 ~~Is~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r   45 (122)
T TIGR02588         8 FGISTLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVER   45 (122)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeE
Confidence            3445666777777766  56667789999876655443

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	322
1yyc_A	174	LEA protein, putative late embryogenesis abundant	97.77
1xo8_A	151	AT1G01470; structural genomics, protein structure	96.98
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	95.59

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=97.77  E-value=6.6e-05  Score=66.12  Aligned_cols=112  Identities=17%  Similarity=0.156  Sum_probs=81.9

Q ss_pred             CCCEEEEeeeEEEeEEeccCCCCCCccceeEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCCc-ccccCC
Q 020687          157 QKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRK-FYQSRK  235 (322)
Q Consensus       157 ~kP~fsV~s~~v~~fnv~~gsd~sgvpt~~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp~-FYQ~~k  235 (322)
                      .+|+++|.++.+..+....             ..+.+++.+.|||.+ .|-+......+.-++..||+|..+. .--+++
T Consensus        43 ~~PeV~v~~v~~~~~~l~~-------------~~~~l~LrV~NPN~~-pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~  108 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDG-------------VDYHAKVSVKNPYSQ-SIPICQISYILKSATRTIASGTIPDPGSLVGS  108 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSS-------------EEEEEEEEEEECSSS-CCBCCSEEEEEEESSSCEEEEEESCCCBCCSS
T ss_pred             CCCEEEEEEeEEeccccce-------------EEEEEEEEEECCCCC-CccccceEEEEEECCEEEEEEecCCCceECCC
Confidence            8999999999999987753             445677888999996 9999999999999999999998866 677899


Q ss_pred             CeEEEEEEEEeeeeeccCCcccccccccCCCCcccEeEEEEEEEEEEEEEeeeE
Q 020687          236 SQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLGKL  289 (322)
Q Consensus       236 stt~v~~~l~G~~vpL~gag~~L~~~~~~~~~~g~VpL~L~~~vrvR~~vlG~l  289 (322)
                      .++++.+.+.-.-..|.   ..+.+  .  .....+|.+|++.+.+..-++|.+
T Consensus       109 g~~~v~Vpv~v~~~~l~---~~~~~--l--~~~~~i~Y~L~g~L~id~pv~G~~  155 (174)
T 1yyc_A          109 GTTVLDVPVKVAYSIAV---SLMKD--M--CTDWDIDYQLDIGLTFDIPVVGDI  155 (174)
T ss_dssp             EEEEEEEEEEESHHHHH---HTCCC--C--CSSEEECEEEEEEEEEECTTSSEE
T ss_pred             CcEEEEEEEEEEHHHHH---HHHHh--c--CCCCccceEEEEEEEeccCCcCCE
Confidence            99999988765432221   11211  1  234578888887665443224543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=96.98  E-value=0.00011  Score=63.08  Aligned_cols=105  Identities=11%  Similarity=0.130  Sum_probs=75.2

Q ss_pred             CCCEEEEeeeEEEeEEeccCCCCCCccceeEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCCc-ccccCC
Q 020687          157 QKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRK-FYQSRK  235 (322)
Q Consensus       157 ~kP~fsV~s~~v~~fnv~~gsd~sgvpt~~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp~-FYQ~~k  235 (322)
                      ++|+++|.++.+..+....             ..+.+++.+.|||.+ .|.+...+..+.-++..||+|..+. .--+++
T Consensus        20 ~~P~v~v~~v~~~~~~~~~-------------~~~~~~l~V~NPN~~-~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~   85 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRDS-------------VEYLAKVSVTNPYSH-SIPICEISFTFHSAGREIGKGKIPDPGSLKAK   85 (151)
T ss_dssp             CSCCCBCSEEEECCCTTTE-------------ECEEEEEEEECSSSS-CCCCEEEEEEEESSSSCEEEEEEEECCCCSSS
T ss_pred             CCCEEEEEEeEEeccCcce-------------eEEEEEEEEECCCCC-CcccccEEEEEEECCEEEEEEecCCCcEECCC
Confidence            7899999999888765542             356677889999996 9999988888888899999998855 667899


Q ss_pred             CeEEEEEEEEeeeeeccCCcccccccccCCCCcccEeEEEEEEEEEE
Q 020687          236 SQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSR  282 (322)
Q Consensus       236 stt~v~~~l~G~~vpL~gag~~L~~~~~~~~~~g~VpL~L~~~vrvR  282 (322)
                      .++++.+.+...-..+..   .+.+  .  .....+|.+|++.+.+.
T Consensus        86 g~~~v~vpv~v~~~~l~~---~~~~--l--~~~~~i~Y~l~g~l~i~  125 (151)
T 1xo8_A           86 DMTALDIPVVVPYSILFN---LARD--V--GVDWDIDYELQIGLTID  125 (151)
T ss_dssp             SEEEEEECCCEEHHHHHH---HHHH--H--HHHSEEEEEEEEEEEEC
T ss_pred             CcEEEEEEEEEEHHHHHH---HHHh--c--ccCCcccEEEEEEEEEc
Confidence            999998776544211111   1111  1  12357888888777544

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=95.59  E-value=0.044  Score=46.12  Aligned_cols=65  Identities=14%  Similarity=0.086  Sum_probs=54.0

Q ss_pred             EEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCC-CCcccccCCCeEEEEEEEEeeeeeccC
Q 020687          188 TVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGA-IRKFYQSRKSQKTVSVAVMGNKIPLYG  253 (322)
Q Consensus       188 s~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~-lp~FYQ~~kstt~v~~~l~G~~vpL~g  253 (322)
                      ...+.+++.+.|||.+ .|-++.....+..+++.||.|. ...+--++.+++++.+.+.-+.-.+..
T Consensus        17 ~t~~~~~l~V~NPN~~-~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~   82 (136)
T 3but_A           17 QTEIVALAKVRNEDVV-PIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE   82 (136)
T ss_dssp             EEEEEEEEEEECCSSS-CEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred             EEEEEEEEEEeCCCCc-ceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence            3567788999999985 9999999999999999999997 567888889999999988777544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	322
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.46

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=3.3e-06  Score=70.60  Aligned_cols=112  Identities=13%  Similarity=0.105  Sum_probs=78.9

Q ss_pred             eCCCCEEEEeeeEEEeEEeccCCCCCCccceeEEEEEEEEEEEecCCCeEEEEEcCceEEEEEcceeeecCCCCc-cccc
Q 020687          155 KSQKPKITMKSINFEHFKIQAGSDFSGVATDMITVNSTVKMIYRNTGTFFGVHVTSNPLDLSYSEITIASGAIRK-FYQS  233 (322)
Q Consensus       155 RP~kP~fsV~s~~v~~fnv~~gsd~sgvpt~~Ls~n~tv~v~~rNPN~~~GI~Y~~~~v~l~Y~~~~lasg~lp~-FYQ~  233 (322)
                      +=++|++++.++.+.++.+..             ..+.+++.+.|||.+ +|.+......++.++..+|+|..+. +--+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~~-------------~~l~~~l~V~NPN~~-~l~i~~l~y~l~~~g~~ia~G~~~~~~~ip   83 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRDS-------------VEYLAKVSVTNPYSH-SIPICEISFTFHSAGREIGKGKIPDPGSLK   83 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTTE-------------ECEEEEEEEECSSSS-CCCCEEEEEEEESSSSCEEEEEEEECCCCS
T ss_pred             CCCCCeEEEEEEEeeecccce-------------EEEEEEEEEECCCCC-ceeeeeEEEEEEECCEEEEeEecCCCcEEc
Confidence            446899999999998876643             456677889999996 9999999999999999999998865 5668


Q ss_pred             CCCeEEEEEEEEeeeeeccCCcccccccccCCCCcccEeEEEEEEEEEEEEEee
Q 020687          234 RKSQKTVSVAVMGNKIPLYGSGAGLSINSTTGSTSHPVPLNLNFVVRSRAYVLG  287 (322)
Q Consensus       234 ~kstt~v~~~l~G~~vpL~gag~~L~~~~~~~~~~g~VpL~L~~~vrvR~~vlG  287 (322)
                      .+.++.+.+.+...-..|   ...+.+  +  ...+.++.+|++.+.+..-++|
T Consensus        84 a~~~~~v~vpv~v~~~~l---~~~~~~--i--~~~~~i~Y~l~g~l~~d~pv~G  130 (151)
T d1xo8a_          84 AKDMTALDIPVVVPYSIL---FNLARD--V--GVDWDIDYELQIGLTIDLPVVG  130 (151)
T ss_dssp             SSSEEEEEECCCEEHHHH---HHHHHH--H--HHHSEEEEEEEEEEEECCTTTS
T ss_pred             CCCcEEEEEEEEEEHHHH---HHHHHh--h--ccCCCccEEEEEEEEEecCccC
Confidence            899999988765432112   112211  1  1234577777766665433344