Citrus Sinensis ID: 020738

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEcEEEEEcccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MPPFTFIFTLVILVSAFHLSFagllaepasghdqplkpgeyastntvpafpaqtqAATCRLDLSaelfggvneacgrdldrsrccpVLAAWLFAAHSRyalqvpaaapaaepdqpmmpddsqkCVNSLQSALVsknvkipqpnascdAILCFCgirlhqisslscpaafnvtagfrnvtpTAAVKNLekncrnssysgctKCLGALQmlkggskngtaehednraskmfsrDCQLMGLTWLLARNKTAYIPTVSAVLRAIMysshppheskcspdqenmplavdslqfektqssssspsrpqnvrAVLVPFLSLIILFSLLV
Flexible Loop (DISEMBL)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQssssspsrpqnvrAVLVPFLSLIILFSLLV
Low Complexity Region (SEG)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVpaaapaaepdqpmmpddSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQssssspsRPQNVRAVLVPflsliilfsllV
Disordered region (IsUnstruct)
***FTFIFTLVILVSAFHLSFAGLLA**********************AFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQV********************************NVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQML*******************FSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMY*****************************************VRAVLVPFLSLIILFSLL*
Disordered Region (DISOPRED)
****TFIFTLVILVSAFHLSFAG****************************AQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY*****************MPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTA************NL*KNCRNSSYSGCTKCLGALQ**************************QLMGLTWLLARNKTAYIPTVSAVLRAIMY***************NMPLAV******************QNVRAVLVPFLSLIILFSLLV
Disordered Region (DISEMBL)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSS***********QENMPLAVDSL****************NVRAVLVPFLSLIILFSLLV
Disordered Region (DISPRO)
MPPFTFIFTLVILVSAFHLSFAGLLAE****************************AATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVP********DQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGG****************FSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	322	2.2.26 [Sep-21-2011]
Q9SUC9	304	Uncharacterized GPI-ancho	yes	no	0.844	0.894	0.746	1e-117

>sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/288 (74%), Positives = 241/288 (83%), Gaps = 16/288 (5%)

Query: 40  EYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY 99
           E    NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R 
Sbjct: 27  EPVQPNTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARS 86

Query: 100 ALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIR 156
           ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIR
Sbjct: 87  ALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIR 146

Query: 157 LHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLK--GGSK 214
           LHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ LK  GG+K
Sbjct: 147 LHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNK 206

Query: 215 NGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSP 274
             T E    R +KM S+DCQLMGLTWLLARNKTAYIPTVSAVLRAIMYS HPPH +KCSP
Sbjct: 207 KTTTE----RGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSP 262

Query: 275 DQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV 322
           DQENMPLAVDSLQF+K+ SSSS      ++  VL PFL L++   L +
Sbjct: 263 DQENMPLAVDSLQFQKSFSSSS------HLFGVL-PFLPLVLCIFLFL 303

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
255553925	318	conserved hypothetical protein [Ricinus	0.959	0.971	0.774	1e-136
225447687	324	PREDICTED: uncharacterized GPI-anchored	0.863	0.858	0.814	1e-130
224124664	293	predicted protein [Populus trichocarpa]	0.900	0.989	0.782	1e-130
224146708	322	predicted protein [Populus trichocarpa]	0.978	0.978	0.732	1e-128
449438052	322	PREDICTED: uncharacterized GPI-anchored	0.897	0.897	0.739	1e-123
296081264	286	unnamed protein product [Vitis vinifera]	0.782	0.881	0.839	1e-122
356515216	318	PREDICTED: uncharacterized GPI-anchored	0.900	0.911	0.710	1e-117
297799164	304	hypothetical protein ARALYDRAFT_491965 [	0.863	0.914	0.716	1e-117
356544892	317	PREDICTED: uncharacterized GPI-anchored	0.878	0.892	0.721	1e-116
18417127	304	uncharacterized protein [Arabidopsis tha	0.844	0.894	0.746	1e-115

>gi|255553925|ref|XP_002518003.1| conserved hypothetical protein [Ricinus communis] gi|223542985|gb|EEF44521.1| conserved hypothetical protein [Ricinus communis]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/311 (77%), Positives = 269/311 (86%), Gaps = 2/311 (0%)

Query: 9   TLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELF 68
           +++I    F  S AGLLAEP SG +QPLKPG+Y+S NTVPAFP QT++  CRLDLSAELF
Sbjct: 6   SVIIFFYLFTPSLAGLLAEPVSGSNQPLKPGDYSSPNTVPAFPVQTESQVCRLDLSAELF 65

Query: 69  GGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPA-AEPDQPMMPDDSQKCVNS 127
           GGVN+ACGR+LDRSRCCPVLAAWLFAAH+RYALQV A+APA AE D PMMPDDSQKCVNS
Sbjct: 66  GGVNDACGRELDRSRCCPVLAAWLFAAHARYALQVSASAPASAEEDLPMMPDDSQKCVNS 125

Query: 128 LQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNL 187
           LQSAL+S+NVKIPQPNASCDAILCFCGIRLHQI+SLSCPAAFNV++GF N TPTAAVKNL
Sbjct: 126 LQSALLSRNVKIPQPNASCDAILCFCGIRLHQITSLSCPAAFNVSSGFHNATPTAAVKNL 185

Query: 188 EKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKT 247
           EKNC+NSSYSGCTKCLGALQ LKG +K  T    D+RA+KMF+RDCQLMGLTWLLARNKT
Sbjct: 186 EKNCKNSSYSGCTKCLGALQKLKGSNKTVTGGGRDDRANKMFNRDCQLMGLTWLLARNKT 245

Query: 248 AYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAV 307
           AYIPTVSAVLRAIMYS+HPPHESKCSPDQENMPLAVDSL F   QS S+S SR      V
Sbjct: 246 AYIPTVSAVLRAIMYSAHPPHESKCSPDQENMPLAVDSLHFGNAQSYSTSLSRSLFGFPV 305

Query: 308 LVPFLSLIILF 318
           L P + L++L+
Sbjct: 306 L-PIIILVLLY 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447687|ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis vinifera]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/281 (81%), Positives = 251/281 (89%), Gaps = 3/281 (1%)

Query: 10  LVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFG 69
           LV ++  F  S AGLLAEPA  H QP+KPG+Y++ NTVPAFP QT+  TCRLDLSAELFG
Sbjct: 13  LVFVLCLFEPSLAGLLAEPADSHQQPMKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFG 72

Query: 70  GVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQ 129
           GVN+ACGR+LDRSRCCPVLAAWLFAAH+R ALQV A APA+  D PMMPDDSQKCVNSLQ
Sbjct: 73  GVNDACGRNLDRSRCCPVLAAWLFAAHARSALQVAAPAPASS-DLPMMPDDSQKCVNSLQ 131

Query: 130 SALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEK 189
           S+L S+N+ IPQPNA+CDAILCFCGIRLHQI+SLSCPAAFN+++ +RN TPTAAVKNLE+
Sbjct: 132 SSLQSRNIHIPQPNATCDAILCFCGIRLHQITSLSCPAAFNISS-YRNATPTAAVKNLER 190

Query: 190 NCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAY 249
           NCRNSSYSGCTKCLGALQ LKG  KNGT E  D RASKMFSRDCQLMGLTWLLARNKTAY
Sbjct: 191 NCRNSSYSGCTKCLGALQKLKGDGKNGTEEGGD-RASKMFSRDCQLMGLTWLLARNKTAY 249

Query: 250 IPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEK 290
           IPTVSAVLRAIMYS+HPPHESKCSPDQENMPLAVDSLQFEK
Sbjct: 250 IPTVSAVLRAIMYSAHPPHESKCSPDQENMPLAVDSLQFEK 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124664|ref|XP_002319388.1| predicted protein [Populus trichocarpa] gi|222857764|gb|EEE95311.1| predicted protein [Populus trichocarpa]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/294 (78%), Positives = 255/294 (86%), Gaps = 4/294 (1%)

Query: 5   TFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLS 64
           TF+ T+ +  S F LS +  LAEP SG +QPLKPG+Y++ NTVPA P QT++  C LDLS
Sbjct: 3   TFL-TIFLSTSLFALSLSSFLAEPVSGQNQPLKPGDYSNPNTVPAIPVQTESQICHLDLS 61

Query: 65  AELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKC 124
           AELFGGVN+ACGRDLDRSRCCPVLAAWLFAAH+R ALQV A+AP   PD PMMPDDSQKC
Sbjct: 62  AELFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVHASAPTPSPDFPMMPDDSQKC 121

Query: 125 VNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAV 184
           VNSLQSAL+SKNVK+PQPNASCDAILCFCGIRLH ISSLSCPAAFNV++GF N TPTAAV
Sbjct: 122 VNSLQSALLSKNVKLPQPNASCDAILCFCGIRLHHISSLSCPAAFNVSSGFHNATPTAAV 181

Query: 185 KNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLAR 244
            NLEKNC+NSSY+GCTKCLGALQ  K G+++ +    D RASKMF+RDCQLMGLTWLLAR
Sbjct: 182 TNLEKNCKNSSYAGCTKCLGALQKAKNGTQDRST--RDERASKMFNRDCQLMGLTWLLAR 239

Query: 245 NKTAYIPTVSAVLRAIMYSSHPP-HESKCSPDQENMPLAVDSLQFEKTQSSSSS 297
           NKT YIPTVSAVLRAIMYS+HPP  ESKCSPDQENMPLAVDSLQFEKTQSSSSS
Sbjct: 240 NKTEYIPTVSAVLRAIMYSTHPPVLESKCSPDQENMPLAVDSLQFEKTQSSSSS 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146708|ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|118488098|gb|ABK95869.1| unknown [Populus trichocarpa] gi|222862982|gb|EEF00489.1| predicted protein [Populus trichocarpa]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/318 (73%), Positives = 259/318 (81%), Gaps = 3/318 (0%)

Query: 7   IFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAE 66
           + T+ +  S F  S +  L+EP SG +QPLKPG+Y++ NTVPAFP QT++  C LDLSAE
Sbjct: 4   LLTIFLFTSLFTHSLSSFLSEPVSGQNQPLKPGDYSNPNTVPAFPVQTESQICHLDLSAE 63

Query: 67  LFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVN 126
           LFGGVN+ACGRDLDRSRCCPVLAAWLFAAH+R ALQV A AP + PD PMMPDDSQKCVN
Sbjct: 64  LFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVQAPAPTSAPDLPMMPDDSQKCVN 123

Query: 127 SLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKN 186
           SLQSAL+SKNVK+ QPNASCDAILCFCGIRLHQISSLSCPAAFNV++ F N TPTAAVKN
Sbjct: 124 SLQSALLSKNVKLAQPNASCDAILCFCGIRLHQISSLSCPAAFNVSSAFHNATPTAAVKN 183

Query: 187 LEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNK 246
           LEKNC+NS+YSGCTKCLGALQ LK  ++       D RASKMF RDCQLMGLTWLLARNK
Sbjct: 184 LEKNCKNSTYSGCTKCLGALQKLKAKNETQDKSTRDERASKMFERDCQLMGLTWLLARNK 243

Query: 247 TAYIPTVSAVLRAIMYSSHPP-HESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVR 305
           T YIPTVSAVLRAIMYS+HPP HESKCSPDQENMPLAVDSLQF K QSSSSS     +  
Sbjct: 244 TQYIPTVSAVLRAIMYSTHPPVHESKCSPDQENMPLAVDSLQFGKAQSSSSSRLTSSSSL 303

Query: 306 AVLVPF--LSLIILFSLL 321
              + F  L L+IL SL 
Sbjct: 304 WSGLRFHVLPLMILVSLF 321

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438052|ref|XP_004136804.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Cucumis sativus]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/299 (73%), Positives = 249/299 (83%), Gaps = 10/299 (3%)

Query: 1   MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCR 60
           +P   FIF  + + +  H S AG L EP SG  QPL PG+Y+S NTVPAFP QTQ   C 
Sbjct: 8   VPLICFIF--LCIATNLHSSSAGFLIEPVSGQSQPLNPGQYSSPNTVPAFPVQTQMQICH 65

Query: 61  LDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDD 120
           LDLS ELFGGV EACGRDLDRSRCCPVLAAWLFAAH+R AL++ A APA+  D PMMPDD
Sbjct: 66  LDLSDELFGGVREACGRDLDRSRCCPVLAAWLFAAHARAALKIAAPAPASAADLPMMPDD 125

Query: 121 SQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAG----FR 176
           SQKCVNSLQ++L+S+N++IPQPNASCDA+LCFCGIRLHQISSLSCPAAFNV+ G    +R
Sbjct: 126 SQKCVNSLQTSLLSRNIRIPQPNASCDAVLCFCGIRLHQISSLSCPAAFNVSGGGNGAYR 185

Query: 177 NVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLM 236
           N TPTAAV+NLEKNCRNSSYSGCTKCLGALQ + G  KN +    ++RASKMF+RDCQLM
Sbjct: 186 NATPTAAVRNLEKNCRNSSYSGCTKCLGALQKVTGTKKNSS----NDRASKMFNRDCQLM 241

Query: 237 GLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSS 295
           GLTWLLARNKT YIPTVSAVLRAIMY++HPPH+S CSPDQENMPLAVDSLQ EK QSSS
Sbjct: 242 GLTWLLARNKTTYIPTVSAVLRAIMYTAHPPHQSTCSPDQENMPLAVDSLQMEKAQSSS 300

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081264|emb|CBI18008.3| unnamed protein product [Vitis vinifera]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/255 (83%), Positives = 234/255 (91%), Gaps = 3/255 (1%)

Query: 36  LKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAA 95
           +KPG+Y++ NTVPAFP QT+  TCRLDLSAELFGGVN+ACGR+LDRSRCCPVLAAWLFAA
Sbjct: 1   MKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFGGVNDACGRNLDRSRCCPVLAAWLFAA 60

Query: 96  HSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGI 155
           H+R ALQV A APA+  D PMMPDDSQKCVNSLQS+L S+N+ IPQPNA+CDAILCFCGI
Sbjct: 61  HARSALQVAAPAPASS-DLPMMPDDSQKCVNSLQSSLQSRNIHIPQPNATCDAILCFCGI 119

Query: 156 RLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLKGGSKN 215
           RLHQI+SLSCPAAFN+++ +RN TPTAAVKNLE+NCRNSSYSGCTKCLGALQ LKG  KN
Sbjct: 120 RLHQITSLSCPAAFNISS-YRNATPTAAVKNLERNCRNSSYSGCTKCLGALQKLKGDGKN 178

Query: 216 GTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPD 275
           GT E  D RASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYS+HPPHESKCSPD
Sbjct: 179 GTEEGGD-RASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSAHPPHESKCSPD 237

Query: 276 QENMPLAVDSLQFEK 290
           QENMPLAVDSLQFEK
Sbjct: 238 QENMPLAVDSLQFEK 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515216|ref|XP_003526297.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Glycine max]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/304 (71%), Positives = 246/304 (80%), Gaps = 14/304 (4%)

Query: 19  LSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRD 78
            S AGLL+EP S  +QPL+PG    +NTVPAFP QTQA TCRLDLS ELFGGV +ACG+D
Sbjct: 28  FSRAGLLSEPVSDPNQPLEPG----SNTVPAFPVQTQALTCRLDLSDELFGGVKDACGKD 83

Query: 79  LDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVK 138
           LDRSRCCPVLAAWLFAAH+R AL V AA P +  D PMMPDDSQKCVNSLQ +L+S+N++
Sbjct: 84  LDRSRCCPVLAAWLFAAHARTALDVSAAPPPSSGDLPMMPDDSQKCVNSLQDSLLSRNIR 143

Query: 139 IPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSG 198
           IPQ NA+CDAILCFCGIRLHQI+SL+C AAFNV+   RN TPTAAV+NLE NCRNSSY+G
Sbjct: 144 IPQSNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHRNATPTAAVRNLENNCRNSSYAG 203

Query: 199 CTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLR 258
           CTKCLGALQ +KG  KN T     +R  KMF+RDCQLMGLTWLLA+NKTAYIPTVSAVLR
Sbjct: 204 CTKCLGALQKVKG-YKNET--KGSDRVKKMFNRDCQLMGLTWLLAKNKTAYIPTVSAVLR 260

Query: 259 AIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILF 318
           A+MYS+HP HESKCSPDQENMPLAVDSLQFE    S  +PSRP      ++P   L++LF
Sbjct: 261 AMMYSAHP-HESKCSPDQENMPLAVDSLQFE----SGHAPSRPSKFCVTILPL--LVLLF 313

Query: 319 SLLV 322
           S  V
Sbjct: 314 SAFV 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799164|ref|XP_002867466.1| hypothetical protein ARALYDRAFT_491965 [Arabidopsis lyrata subsp. lyrata] gi|297313302|gb|EFH43725.1| hypothetical protein ARALYDRAFT_491965 [Arabidopsis lyrata subsp. lyrata]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/307 (71%), Positives = 247/307 (80%), Gaps = 29/307 (9%)

Query: 21  FAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLD 80
            + LLAEP     QP         NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LD
Sbjct: 21  LSNLLAEPV----QP---------NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLD 67

Query: 81  RSRCCPVLAAWLFAAHSRYALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNV 137
           RSRCCPVLAAWLFAAH+R ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL+ K +
Sbjct: 68  RSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLIKQI 127

Query: 138 KIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYS 197
           KIPQPN+SCDAILCFCGIRLHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYS
Sbjct: 128 KIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYS 187

Query: 198 GCTKCLGALQML--KGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSA 255
           GCT+CLGALQ L  +GG+K  T E    R SKM S+DC+LMGLTWLLARNKTAYIPTVSA
Sbjct: 188 GCTRCLGALQKLNVRGGNKKTTTE----RGSKMMSKDCKLMGLTWLLARNKTAYIPTVSA 243

Query: 256 VLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLI 315
           VLRAIMYS HPPH +KCSPDQENMPLAVDSLQFE++ SSSS      ++  VL PFL L+
Sbjct: 244 VLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQFERSLSSSS------HLFGVL-PFLPLV 296

Query: 316 ILFSLLV 322
           +   L +
Sbjct: 297 LCIVLFL 303

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544892|ref|XP_003540881.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Glycine max]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/298 (72%), Positives = 244/298 (81%), Gaps = 15/298 (5%)

Query: 4   FTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDL 63
            TF  +L+ L+     S AGLL+EP S  +QPL+PG    +NTVPAFP QTQA TCRLDL
Sbjct: 15  LTFFTSLLFLLP---FSRAGLLSEPVSDPNQPLEPG----SNTVPAFPVQTQALTCRLDL 67

Query: 64  SAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQK 123
           S ELFGGV +ACG+DLDRSRCCPVLAAWLFAAH+R AL V AA P +  D PMMPDDSQK
Sbjct: 68  SDELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARTALDVSAAPPPSSADLPMMPDDSQK 127

Query: 124 CVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAA 183
           CVNSLQ +L+S+N++IPQPNA+CDAILCFCGIRLHQI+SL+C AAFNV+   RN TPTAA
Sbjct: 128 CVNSLQDSLLSRNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHRNATPTAA 187

Query: 184 VKNLEKNCRNSSYSGCTKCLGALQMLKGGSKNGTAEHEDNRASKMFSRDCQLMGLTWLLA 243
           V+NLE NCRNSSY+GCTKCLGALQ +K G KN T     +R  KMF+RDCQLMGLTWLLA
Sbjct: 188 VRNLENNCRNSSYAGCTKCLGALQKVK-GYKNET--KGSDRVKKMFNRDCQLMGLTWLLA 244

Query: 244 RNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQFEKTQSSSSSPSRP 301
           +NKTAYIPTVSAVLRA+MYS+H PHESKCSPDQENMPLAVDSLQFE    S  +PSRP
Sbjct: 245 KNKTAYIPTVSAVLRAMMYSAH-PHESKCSPDQENMPLAVDSLQFE----SGHAPSRP 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18417127|ref|NP_567797.1| uncharacterized protein [Arabidopsis thaliana] gi|75208205|sp|Q9SUC9.1|UGPI7_ARATH RecName: Full=Uncharacterized GPI-anchored protein At4g28100; Flags: Precursor gi|4455369|emb|CAB36779.1| hypothetical protein [Arabidopsis thaliana] gi|7269664|emb|CAB79612.1| hypothetical protein [Arabidopsis thaliana] gi|51968690|dbj|BAD43037.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|51969584|dbj|BAD43484.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|332660041|gb|AEE85441.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/288 (74%), Positives = 241/288 (83%), Gaps = 16/288 (5%)

Query: 40  EYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY 99
           E    NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R 
Sbjct: 27  EPVQPNTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARS 86

Query: 100 ALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIR 156
           ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIR
Sbjct: 87  ALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIR 146

Query: 157 LHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLK--GGSK 214
           LHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ LK  GG+K
Sbjct: 147 LHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNK 206

Query: 215 NGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSP 274
             T E    R +KM S+DCQLMGLTWLLARNKTAYIPTVSAVLRAIMYS HPPH +KCSP
Sbjct: 207 KTTTE----RGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSP 262

Query: 275 DQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV 322
           DQENMPLAVDSLQF+K+ SSSS      ++  VL PFL L++   L +
Sbjct: 263 DQENMPLAVDSLQFQKSFSSSS------HLFGVL-PFLPLVLCIFLFL 303

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2132942	304	AT4G28100 "AT4G28100" [Arabido	0.770	0.815	0.747	5e-99
TAIR|locus:2092732	335	AT3G18050 "AT3G18050" [Arabido	0.506	0.486	0.427	8.8e-31

TAIR|locus:2132942 AT4G28100 "AT4G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
 Identities = 192/257 (74%), Positives = 212/257 (82%)

Query:    40 EYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY 99
             E    NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R 
Sbjct:    27 EPVQPNTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARS 86

Query:   100 ALQVXXXXXXXXXXXXXXXXX---SQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIR 156
             ALQ+                    SQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIR
Sbjct:    87 ALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIR 146

Query:   157 LHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLK--GGSK 214
             LHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ LK  GG+K
Sbjct:   147 LHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNK 206

Query:   215 NGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSP 274
               T E    R +KM S+DCQLMGLTWLLARNKTAYIPTVSAVLRAIMYS HPPH +KCSP
Sbjct:   207 KTTTE----RGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSP 262

Query:   275 DQENMPLAVDSLQFEKT 291
             DQENMPLAVDSLQF+K+
Sbjct:   263 DQENMPLAVDSLQFQKS 279

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2092732 AT3G18050 "AT3G18050" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 77/180 (42%), Positives = 106/180 (58%)

Query:   121 SQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTP 180
             S+ CV+ L  +L  + +++ +PN +CD + C+CGIRLH    LSC  AF V    R V  
Sbjct:   130 SETCVDGLGKSLRQRGIELTRPNETCDVVYCYCGIRLHP---LSCSEAFRVNDEGRLVGD 186

Query:   181 TAAVKNLEKNCRNSSYS---------GCTKCLGALQMLKGGSKNGTAE--HED-NRASKM 228
                V  LE +C + S++         GC KCL +L  L     +GT     ED NR +KM
Sbjct:   187 ER-VDRLETDCLSGSHNNADGFSPLLGCNKCLNSLYKLNPKKTSGTRNPSKEDRNRTAKM 245

Query:   229 FSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSPDQENMPLAVDSLQF 288
              ++DC LMGLTWLLA+N+TAY PTV++VLRA+M + H      C+   + MPLAVDS +F
Sbjct:   246 HNKDCVLMGLTWLLAKNRTAYFPTVTSVLRAVMLN-HDGVPRSCALGSDGMPLAVDSSEF 304

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SUC9	UGPI7_ARATH	No assigned EC number	0.7465	0.8447	0.8947	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XIII0028 hypothetical protein (293 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	322
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 41/279 (14%), Positives = 77/279 (27%), Gaps = 73/279 (26%)

Query: 105 AAAPAAEPDQPMMPDDS-QKCVNSLQSA--LVSK-NVKIPQPNASCDAILC----FCGIR 156
            +    E  QP M      +  + L +   + +K NV   QP       L        + 
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154

Query: 157 LH---------------QISSLSCPAAFNV---TAGFRNVTPTAAVKNLEKNCRNSSYSG 198
           +                    + C   F +        N +P   ++ L+K       + 
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN-SPETVLEMLQKLLYQIDPNW 213

Query: 199 CTKCLGA------LQMLKGGSKNGTAEHE------------DNRASKMFSRDCQLMGLTW 240
            ++   +      +  ++   +                   + +A   F+  C+++  T 
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT- 272

Query: 241 LLARNKTAYIPTVSAVLRAIMYSSHP-----PHESK--------CSPDQ------ENMPL 281
              R K      +SA     +   H      P E K        C P           P 
Sbjct: 273 ---RFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 282 AVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSL 320
            + S+  E  +      +   N + V    L+ II  SL
Sbjct: 329 RL-SIIAESIR---DGLATWDNWKHVNCDKLTTIIESSL 363

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00