Citrus Sinensis ID: 020739
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 322 | ||||||
| 255540123 | 297 | conserved hypothetical protein [Ricinus | 0.854 | 0.925 | 0.588 | 1e-93 | |
| 357464993 | 311 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.832 | 0.861 | 0.542 | 6e-87 | |
| 224136248 | 275 | predicted protein [Populus trichocarpa] | 0.798 | 0.934 | 0.593 | 1e-86 | |
| 449503339 | 291 | PREDICTED: bidirectional sugar transport | 0.798 | 0.883 | 0.555 | 4e-86 | |
| 449454808 | 291 | PREDICTED: bidirectional sugar transport | 0.798 | 0.883 | 0.552 | 9e-85 | |
| 356516515 | 309 | PREDICTED: bidirectional sugar transport | 0.829 | 0.864 | 0.567 | 2e-83 | |
| 449503337 | 294 | PREDICTED: bidirectional sugar transport | 0.847 | 0.928 | 0.514 | 3e-83 | |
| 356507380 | 305 | PREDICTED: bidirectional sugar transport | 0.813 | 0.859 | 0.545 | 8e-82 | |
| 449472119 | 295 | PREDICTED: bidirectional sugar transport | 0.770 | 0.840 | 0.536 | 1e-81 | |
| 449454810 | 295 | PREDICTED: bidirectional sugar transport | 0.770 | 0.840 | 0.533 | 4e-81 |
| >gi|255540123|ref|XP_002511126.1| conserved hypothetical protein [Ricinus communis] gi|223550241|gb|EEF51728.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/318 (58%), Positives = 227/318 (71%), Gaps = 43/318 (13%)
Query: 1 MTMFSTHDPSVFAFGLLGILQIQKCHCLNIIFMLHAYVYVFVANIFICFHVTIIGNIVSF 60
M +F+TH+PSVF FGLLG NIVSF
Sbjct: 1 MAIFNTHNPSVFVFGLLG-------------------------------------NIVSF 23
Query: 61 IVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVI 120
+VFLAP+PTF RVCKKKSTEGFQS PYVV+LFSAMLW+YYA +K DAFLLITIN+ GC+I
Sbjct: 24 VVFLAPVPTFLRVCKKKSTEGFQSFPYVVSLFSAMLWLYYASLKSDAFLLITINSVGCLI 83
Query: 121 ETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVF 180
ETIY+ L+IT+APKQAR+ TL++LLLLNFGGF ILLLSHFLAKGS R +LGWVCV+F
Sbjct: 84 ETIYITLFITYAPKQARITTLKILLLLNFGGFCLILLLSHFLAKGS-ERATILGWVCVIF 142
Query: 181 SVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVPNVLGFI 240
SVSVFAAPLS+MR+V+RTKSVEFMPFYLS FLTL+A+MW FYGL LKD+Y+AVPN+LG +
Sbjct: 143 SVSVFAAPLSVMRIVIRTKSVEFMPFYLSFFLTLSAIMWLFYGLLLKDLYIAVPNILGLV 202
Query: 241 FGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVKLSTNNMTASEEQ--TNSRNNFDDKN 298
FGV+QMILY IY+N + VV E K+PEH VD VKLS +++ + S+ N DD
Sbjct: 203 FGVLQMILYVIYKNVKTVVEEP--KLPEHNVDNVKLSAVITCEVQQEVCSQSQPNGDD-G 259
Query: 299 EHEQANDQHEKARESCNQ 316
H + H+ + +
Sbjct: 260 AHNKEQKMHDNPANAVTE 277
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357464993|ref|XP_003602778.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355491826|gb|AES73029.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224136248|ref|XP_002322282.1| predicted protein [Populus trichocarpa] gi|222869278|gb|EEF06409.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449503339|ref|XP_004161953.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449454808|ref|XP_004145146.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] gi|449472123|ref|XP_004153502.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356516515|ref|XP_003526939.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449503337|ref|XP_004161952.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356507380|ref|XP_003522445.1| PREDICTED: bidirectional sugar transporter SWEET14-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449472119|ref|XP_004153501.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449454810|ref|XP_004145147.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 322 | ||||||
| TAIR|locus:2157951 | 294 | SWEET13 [Arabidopsis thaliana | 0.732 | 0.802 | 0.547 | 1.1e-66 | |
| UNIPROTKB|P93332 | 268 | N3 "Bidirectional sugar transp | 0.791 | 0.951 | 0.484 | 4.2e-65 | |
| TAIR|locus:2171721 | 285 | SWEET12 [Arabidopsis thaliana | 0.714 | 0.807 | 0.508 | 6.8e-65 | |
| UNIPROTKB|B8BKP4 | 303 | SWEET14 "Bidirectional sugar t | 0.708 | 0.752 | 0.520 | 1.4e-62 | |
| UNIPROTKB|Q2R3P9 | 303 | SWEET14 "Bidirectional sugar t | 0.708 | 0.752 | 0.520 | 1.4e-62 | |
| TAIR|locus:2117263 | 281 | SWEET14 [Arabidopsis thaliana | 0.795 | 0.911 | 0.505 | 7.9e-62 | |
| TAIR|locus:2114540 | 289 | SWEET11 [Arabidopsis thaliana | 0.698 | 0.778 | 0.502 | 2e-61 | |
| UNIPROTKB|A2X5B4 | 319 | SWEET15 "Bidirectional sugar t | 0.736 | 0.742 | 0.493 | 8.1e-60 | |
| UNIPROTKB|Q6K602 | 319 | SWEET15 "Bidirectional sugar t | 0.736 | 0.742 | 0.493 | 8.1e-60 | |
| TAIR|locus:2179867 | 292 | SAG29 "senescence-associated g | 0.736 | 0.811 | 0.466 | 1.3e-59 |
| TAIR|locus:2157951 SWEET13 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 648 (233.2 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 132/241 (54%), Positives = 163/241 (67%)
Query: 42 VANIFICFHVTIIGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYA 101
+ N F I+GNI+SF+VFLAP+PTF R+CKKKSTEGFQSLPYV ALFSAMLWIYYA
Sbjct: 3 LTNNLWAFVFGILGNIISFVVFLAPVPTFVRICKKKSTEGFQSLPYVSALFSAMLWIYYA 62
Query: 102 MMKKD-AFLLITINAFGCVIETIYLALYITFAPKQARXXXXXXXXXXXXXXXXXXXXXXX 160
M K AFLLITINAFGCVIETIY+ L++++A K+ R
Sbjct: 63 MQKDGTAFLLITINAFGCVIETIYIVLFVSYANKKTRISTLKVLGLLNFLGFAAIVLVCE 122
Query: 161 XXAKGSAARLRLLGWVCXXXXXXXXXXPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWF 220
KGS R ++LG +C PLSIMR+VVRT+SVEFMPF LSLFLT++AV W
Sbjct: 123 LLTKGST-REKVLGGICVGFSVSVFAAPLSIMRVVVRTRSVEFMPFSLSLFLTISAVTWL 181
Query: 221 FYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNK---VPEHTVDVVKLS 277
FYGL +KD YVA+PNVLG G VQMILY I++ Y+ V + +K V +H++D+ KL+
Sbjct: 182 FYGLAIKDFYVALPNVLGAFLGAVQMILYIIFKYYKTPVAQKTDKSKDVSDHSIDIAKLT 241
Query: 278 T 278
T
Sbjct: 242 T 242
|
|
| UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171721 SWEET12 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8BKP4 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2R3P9 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117263 SWEET14 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114540 SWEET11 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00017991001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (270 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 322 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-30 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 2e-27 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 4e-30
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 172 LLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMWFFYGLFLKDVYV 231
LLG +CVVFSV+VF +PLSI+R V++TKSVE MPF L L+A +W YGL KD Y+
Sbjct: 2 LLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGYI 61
Query: 232 AVPNVLGFIFGVVQMILYAIYRNYRR 257
+PN +G + G + +IL+ IY +
Sbjct: 62 IIPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 322 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.84 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.83 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.45 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.14 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.12 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.54 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.08 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 97.76 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 96.76 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 96.02 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 95.8 | |
| PHA02246 | 192 | hypothetical protein | 94.8 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 92.99 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 92.89 | |
| PHA02246 | 192 | hypothetical protein | 90.43 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 89.63 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 87.45 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 87.35 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 83.27 | |
| KOG2489 | 592 | consensus Transmembrane protein [General function | 82.29 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 80.96 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 80.29 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-51 Score=380.13 Aligned_cols=223 Identities=48% Similarity=0.890 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHHhhhccCceeeeehhhHHHHHHHHHHHHHH
Q 020739 50 HVTIIGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAFLLITINAFGCVIETIYLALYI 129 (322)
Q Consensus 50 ~vgilG~i~si~~flSPlp~~~~I~K~Kst~~~s~~P~v~~l~n~~lWl~YG~l~~d~~~vi~~N~~G~vl~~~yl~vy~ 129 (322)
++|+.|+++++++|++|+|+++||+||||+|++|+.||+++++||++|+.||++++|.+.++++|++|++++++|+..|+
T Consensus 8 l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN~~G~~ie~~Yi~~f~ 87 (243)
T KOG1623|consen 8 LFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITINGIGLVIETVYISIFL 87 (243)
T ss_pred HHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEehhcHHHHHHHHHHHh
Confidence 33444999999999999999999999999999999999999999999999999988345689999999999999999999
Q ss_pred HhccchhhHHHHHHHHHHHHHHHHHHHhhhheeecChhhhHHhhhhhHHHHHHHHhhcchhhhhhhhccCcccccccHHH
Q 020739 130 TFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLS 209 (322)
Q Consensus 130 ~y~~~k~r~~~~~~~~~~~~~~~~~i~l~t~~~~~~~~~~~~~lG~i~~v~si~~f~sPL~~i~~ViktKs~~~mp~~l~ 209 (322)
.|+++|++. +.....+.++++++.+.+....+++++|.+.+|++|++++++||+|||..+|+||||||+|+||++++
T Consensus 88 ~ya~~k~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls 164 (243)
T KOG1623|consen 88 YYAPKKKTV---KIVLALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLS 164 (243)
T ss_pred eecCchhee---EeeehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHH
Confidence 999988632 22223344566666777777788887889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEechhHHHHHHHHHhhheeEEeCCccceecccccCCCccccccc
Q 020739 210 LFLTLNAVMWFFYGLFLKDVYVAVPNVLGFIFGVVQMILYAIYRNYRRVVVEDVNKVPEHTVDVVK 275 (322)
Q Consensus 210 ~~~~ln~~lW~~YGll~~D~~I~ipN~iG~~l~~~ql~ly~iY~~~~~~~~~~~~~~~~~~~~~~~ 275 (322)
++.++++..|++||++.+|.||++||++|++++++||.+|+.|++++.......++.+|++.+..+
T Consensus 165 ~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~~~~~~~~~~~~~~~~~~~ 230 (243)
T KOG1623|consen 165 FALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTEKIVPPKQNKKDVVVDEVL 230 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcccccccccccCCccccccc
Confidence 999999999999999999999999999999999999999999998774332222333344444433
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2489 consensus Transmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00