Citrus Sinensis ID: 020855

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccEEHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcc
Coil and Loop (DISEMBL)
meappalqlqtrvndreldshidTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLyydkggnskWMATFVQsagfpillpilccfsngsrsanttdpkiSTLVCLYVAFGLLltgdnmmySYGLLYLPVSTYSLLCATQLAFNAFFSFflnsqkftpfIFNSLVLLTISATLLAVnadsentsgvskgnYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCvvglfasgewkglskemngygegRVSYLMTLIWTAVTWQISSVGllglvfepglldgaedLRIFLPLFW
Flexible Loop (DISEMBL)
meappalqlqtrvndreldshiDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADsentsgvskgNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Low Complexity Region (SEG)
MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATqlafnaffsfflnsqKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTlgasatyslylsllqlsFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Disordered region (IsUnstruct)
*************************MNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLF*
Disordered Region (DISOPRED)
****************************************WLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCF*************ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL*******************IGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Disordered Region (DISEMBL)
MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Disordered Region (DISPRO)
********************************LKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPLFW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
O49726	390	Probable purine permease	yes	no	0.940	0.771	0.525	9e-82
O49725	390	Probable purine permease	yes	no	0.934	0.766	0.548	3e-81
Q9LPF6	379	Probable purine permease	no	no	0.843	0.712	0.579	5e-79
Q8RY74	377	Probable purine permease	no	no	0.893	0.758	0.501	4e-73
Q0WRB9	394	Probable purine permease	no	no	0.828	0.672	0.538	6e-72
Q8RY83	361	Probable purine permease	no	no	0.840	0.745	0.516	1e-71
O49722	387	Probable purine permease	no	no	0.912	0.754	0.475	8e-69
Q2V3H2	390	Probable purine permease	no	no	0.9	0.738	0.491	1e-68
Q9FLL4	358	Putative purine permease	no	no	0.890	0.796	0.482	1e-66
Q9FZ95	351	Purine permease 3 OS=Arab	no	no	0.85	0.774	0.338	5e-45

>sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2

 Score =  303 bits (777), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 162/308 (52%), Positives = 207/308 (67%), Gaps = 7/308 (2%)

Query: 1   MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKH---YKWWLRVILYVVCLLVGQSA 57
           M+    +Q+  +     + +  D   +      KL H   YK WLRV +Y   ++ GQS 
Sbjct: 1   MKGDQEVQVIVQQGKEPIPTDQDERSSVSGSQTKLSHSNTYKRWLRVAIYTFFVISGQSV 60

Query: 58  ATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTL---VCL 114
           AT+LGRLYY+ GGNSKW+AT VQ  GFPILLP     S  + +    D K+++L     +
Sbjct: 61  ATILGRLYYENGGNSKWLATVVQLVGFPILLP-YHLLSVKTHTTTQRDGKLTSLRNRALV 119

Query: 115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVL 174
           Y+  GLL+     +YS GLLYLPVST SL+CA+QLAF AFFS+ LNSQK TP I NSL L
Sbjct: 120 YIVLGLLVGAACYLYSIGLLYLPVSTLSLICASQLAFTAFFSYLLNSQKLTPIILNSLFL 179

Query: 175 LTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFS 234
           LTIS+TLLA N +  ++  V+KG YV GF+CT+GASA + L LSL QL+F KV+KK+TFS
Sbjct: 180 LTISSTLLAFNNEESDSKKVTKGEYVKGFVCTVGASAGFGLLLSLQQLAFRKVLKKQTFS 239

Query: 235 VVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSV 294
            V++M IY S VA+C  VVGLFAS EWK LS EM  Y  G+VSY+M L+WTAVTWQ+ S+
Sbjct: 240 EVINMIIYMSLVASCVSVVGLFASSEWKTLSSEMENYKLGKVSYVMNLVWTAVTWQVFSI 299

Query: 295 GLLGLVFE 302
           G  GL+FE
Sbjct: 300 GCTGLIFE 307

Arabidopsis thaliana (taxid: 3702)

>sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2

 Score =  301 bits (772), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 211/310 (68%), Gaps = 11/310 (3%)

Query: 1   MEAPPALQLQTRVNDRELDSHIDTSMNQ----QWRFLKLKHYKWWLRVILYVVCLLVGQS 56
           M A   LQ+  R   +E +  +    N     Q        YK WLRV LY   ++ GQ+
Sbjct: 1   MTADQELQIIVR-QGKEPNPTVQDERNSVSSSQAEVSHSNTYKRWLRVTLYTFFVISGQT 59

Query: 57  AATLLGRLYYDKGGNSKWMATFVQSAGFPILLP--ILCCFSNGS--RSANTTDPKISTLV 112
            AT+LGR+YYD GGNSKW+AT VQ  GFP+LLP  IL   ++ +  R    T P+    V
Sbjct: 60  VATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSFKTHATTDRDGKRTSPR--NRV 117

Query: 113 CLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSL 172
            +YV  GLL+  D  +YS GLLYLPVSTYSL+CA+QLAFNAFFS+FLNSQK TP I NSL
Sbjct: 118 LVYVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAFFSYFLNSQKLTPIILNSL 177

Query: 173 VLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET 232
            LLTIS+TLLA N +  +++ V+KG YV GF+CT+ ASA Y L LSL QL+F KV+KK+ 
Sbjct: 178 FLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYGLVLSLQQLAFLKVLKKQN 237

Query: 233 FSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQIS 292
           FS V+DM IY S VA+C  VVGLFAS EWK LS EM+ Y  G+VSY+M L+WTAVTWQ+ 
Sbjct: 238 FSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKHGKVSYIMNLVWTAVTWQVF 297

Query: 293 SVGLLGLVFE 302
           S+G  GL+FE
Sbjct: 298 SIGGTGLIFE 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1

 Score =  294 bits (753), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 157/271 (57%), Positives = 209/271 (77%), Gaps = 1/271 (0%)

Query: 32  FLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPIL 91
            LKLK ++WW+ V + +  L+ GQ+A+ LLGR YYD+GGNSKWMAT VQ+A FPIL   L
Sbjct: 34  LLKLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTAAFPILYIPL 93

Query: 92  CCFSNGSRSANTTDPK-ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLA 150
               + +   ++     +  +V +YV  G+++ GDNM+YS GLLYL  STYSL+CATQLA
Sbjct: 94  LLLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLYSVGLLYLSASTYSLICATQLA 153

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FNA FS+F+N+QKFT  I NS+VLL+ SA L+A+N D++  SGVS+  Y++GF+CTL AS
Sbjct: 154 FNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAAS 213

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNG 270
           A YSL LSL+Q SFEK++K+ETFSVVL+MQIY+S VATC  V+GLFASGEW+ L  EM G
Sbjct: 214 ALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEG 273

Query: 271 YGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
           Y +G+ SY++TL+WTAVTWQ+ SVG++GL+F
Sbjct: 274 YHKGQASYVLTLVWTAVTWQVCSVGVVGLIF 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1

 Score =  275 bits (702), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 148/295 (50%), Positives = 199/295 (67%), Gaps = 9/295 (3%)

Query: 15  DRELDSHI-DTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSK 73
           D+ L++++ D    + +   + K+ K WLRV +Y + ++  Q  AT+LGRLYY+ GG S 
Sbjct: 12  DQNLEANLLDHEETESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKST 71

Query: 74  WMATFVQSAGFPILLPILCCFSNGSRSANTTD------PKISTLVCLYVAFGLLLTGDNM 127
           ++ T +Q  GFP+L  IL  F +  R   +TD      P  +TL  +Y+  GLL++    
Sbjct: 72  YVVTLLQLIGFPVL--ILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAY 129

Query: 128 MYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD 187
           + + GLLYLPVST+SL+ A+QLAF AFFS+FLNSQKFTP I NSL LLT+S+ LL VN D
Sbjct: 130 LSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTD 189

Query: 188 SENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVA 247
           SENT+ VS+  YVIGF+CT+GASA   L LSL+QL F KV  K T S VLD+  Y S VA
Sbjct: 190 SENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVA 249

Query: 248 TCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFE 302
           TC  ++GLFASGEW+ L  EM  Y  G+VSY++TL   A+ WQ+ +VG +GL+FE
Sbjct: 250 TCVVLIGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFE 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WRB9|PUP8_ARATH Probable purine permease 8 OS=Arabidopsis thaliana GN=PUP8 PE=2 SV=1

 Score =  271 bits (692), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/273 (53%), Positives = 195/273 (71%), Gaps = 8/273 (2%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
           K+YK WLR+ +YV  +L  Q+ +T+LGR+YY+ GG S WM T VQ  GFP+L   L  F 
Sbjct: 40  KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLF--LFRFF 97

Query: 96  NGSRSANTTDP---KISTLVCL---YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQL 149
           + +++   T+    K S+   L   Y+  GLL++ ++ M S GLLYLPVST+SL+ A+QL
Sbjct: 98  SQTKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQL 157

Query: 150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGA 209
           AF AFFS+FLNSQKFTPFI NSL LLTIS+ LL VN DSENT+ VS+  YVIG +CT+GA
Sbjct: 158 AFTAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGA 217

Query: 210 SATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMN 269
           SA   L LSL+QL   KV+KK+TFS V D+  Y S VA+C  ++GLFASGEWK L+ EM 
Sbjct: 218 SAGIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEME 277

Query: 270 GYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFE 302
            Y  G+V Y+MTL   A++WQ+ ++G++GL+FE
Sbjct: 278 NYKLGKVPYVMTLASIAISWQVYTIGVVGLIFE 310

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis thaliana GN=PUP13 PE=2 SV=1

 Score =  270 bits (689), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 140/271 (51%), Positives = 196/271 (72%), Gaps = 2/271 (0%)

Query: 31  RFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPI 90
           + +KLK   WW+ V + +  L+  Q+ A LLGR YY++GGNSKW++T VQ+ GFPIL   
Sbjct: 25  QLMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYNEGGNSKWISTLVQTCGFPILYLP 84

Query: 91  LCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLA 150
           LC       S+++   K  TLV +Y++ G  +  DN++YS+GLLYL  STYS+LC++QLA
Sbjct: 85  LCFLPASHSSSSSCSFK--TLVWIYLSLGFAIGLDNLLYSFGLLYLSASTYSILCSSQLA 142

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FN  FS+++NSQK T  I  S++ L++SA L++++ DS + SG SK +Y+IG LCT+ AS
Sbjct: 143 FNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDDDSNSPSGDSKWSYLIGCLCTVFAS 202

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNG 270
             YSL LSL+Q SFE V+K ETFS+VL+MQIY+S VA+C  V+GLFASGEW  LS EM  
Sbjct: 203 LIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEMEE 262

Query: 271 YGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
           + EG+V Y++TL+ TAV+WQ+ SVG + L+F
Sbjct: 263 FHEGQVIYVLTLVGTAVSWQLGSVGAVALIF 293

Arabidopsis thaliana (taxid: 3702)

>sp|O49722|PUP6_ARATH Probable purine permease 6 OS=Arabidopsis thaliana GN=PUP6 PE=3 SV=2

 Score =  260 bits (665), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 145/305 (47%), Positives = 194/305 (63%), Gaps = 13/305 (4%)

Query: 9   LQTRVNDRELDSHIDTSMNQQWRFLKLKH-YKWWLRVILYVVCLLVGQSAATLLGRLYYD 67
           ++     +EL  H++     ++   +  H Y W LRV LYV  LL G++ ATLLGRLYY+
Sbjct: 2   MELESETQELHLHVNGEPEGKFSTEERSHKYSWRLRVSLYVTLLLAGETIATLLGRLYYE 61

Query: 68  KGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKIS------TLVCLYVAFGLL 121
           KGG S W+ T VQ  GFP+ LP  C +      + T            TL  +Y+  GLL
Sbjct: 62  KGGKSTWLETLVQLVGFPLTLP--CYYYLKPEPSKTKTITKKTTSSFLTLSLVYIGLGLL 119

Query: 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181
           + G  ++YS+GLLYLPVST+SL+ A+QLAFNA FS+FLNSQK TPFI NSLVLLTIS+TL
Sbjct: 120 VAGHCILYSFGLLYLPVSTFSLISASQLAFNAVFSYFLNSQKITPFILNSLVLLTISSTL 179

Query: 182 LAVNADSEN----TSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVL 237
           L +  + E+    +   +K  YVIG++C +G+SA YSL LSL   +FEK++KK TF  +L
Sbjct: 180 LVIQHEPESPSSTSKSAAKSKYVIGYICAVGSSAGYSLVLSLTDYAFEKILKKYTFKAIL 239

Query: 238 DMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLL 297
           DM  Y S VATC  VVGLF SG WK LS EM  +  G+ SY++  I + ++WQ   +G +
Sbjct: 240 DMATYPSMVATCVVVVGLFGSGGWKKLSTEMEEFQLGKSSYILINIGSTISWQACLIGSV 299

Query: 298 GLVFE 302
           GL+ E
Sbjct: 300 GLIIE 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis thaliana GN=PUP7 PE=2 SV=1

 Score =  260 bits (664), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/301 (49%), Positives = 204/301 (67%), Gaps = 13/301 (4%)

Query: 8   QLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYD 67
            L+  + D E+ +   +S   Q      ++YK WLRV +YV+ +L  Q  AT+LGRLYY+
Sbjct: 14  NLEANLIDHEVVTESSSSAVPQ-----TENYKRWLRVSIYVIFVLFCQPLATILGRLYYE 68

Query: 68  KGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTD------PKISTLVCLYVAFGLL 121
            GGNS ++ T +Q  GFP+L  +L  F +  R   +TD      P  +TL  +Y+  GLL
Sbjct: 69  NGGNSTYVVTLLQLIGFPVL--VLFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLL 126

Query: 122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL 181
           ++    + + GLLYLPVST+SL+ A+QLAF AFFS+FLNSQKFTP I +SL+LLT+S+ L
Sbjct: 127 VSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVSSLLLLTVSSAL 186

Query: 182 LAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQI 241
           L VN DSEN++ VS+  YVIGF+CT+GASA   L LSL+Q+ F KV  K T S V D+ I
Sbjct: 187 LVVNTDSENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAVTDLAI 246

Query: 242 YSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
           Y S VA+C  ++GLFASGEW+ L  EM  Y  G+VSY++TL   A++WQ+ ++GL+GL+F
Sbjct: 247 YQSLVASCVVLIGLFASGEWETLPSEMRNYKLGKVSYVLTLASAAISWQVYTLGLVGLIF 306

Query: 302 E 302
           E
Sbjct: 307 E 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis thaliana GN=PUP12 PE=3 SV=1

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/288 (48%), Positives = 198/288 (68%), Gaps = 3/288 (1%)

Query: 15  DRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKW 74
             E +    TS+  Q   +KL   +WW+ V + +  L+  Q+ + LLGR YY++GGNSKW
Sbjct: 5   KEEDEGRRRTSVPTQ--LMKLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKW 62

Query: 75  MATFVQSAGFPIL-LPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGL 133
           ++T VQ+ GFPIL LP+    ++ S S++++     TLV +Y++ G  +  DN +YS GL
Sbjct: 63  ISTLVQTGGFPILYLPLSLLPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGL 122

Query: 134 LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG 193
           LYL  STYS+LCA+QLAFN  F +++NSQK T  IF S++ L+ISA L++++ DS + SG
Sbjct: 123 LYLSASTYSILCASQLAFNGVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSG 182

Query: 194 VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVV 253
            SK +Y+IG  C + AS  YSL LSL+Q SFEKV+K ET S+VL+MQIY+S VA+C  V+
Sbjct: 183 DSKWSYLIGCFCAVFASLIYSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVASCVAVI 242

Query: 254 GLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
           GLFASGEW  LS EM  + EG+V Y++TL+  AV+ Q+  VG + L+F
Sbjct: 243 GLFASGEWMLLSVEMEEFQEGQVIYVLTLVGAAVSCQLGCVGAVSLIF 290

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ95|PUP3_ARATH Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1

 Score =  181 bits (460), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 167/284 (58%), Gaps = 12/284 (4%)

Query: 44  VILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LPILCCFSNGSRSAN 102
           VI+  + L +G     L+ RLY++ GG   W +TF+++AGFP++ +P+L  +    RS N
Sbjct: 6   VIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSNN 65

Query: 103 TTD--------PKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAF 154
             D        P+   L+   V  G+L   DN +Y+YG+ YLPVST +L+ A+QLAF A 
Sbjct: 66  VGDSTSFFLIKPR---LLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAI 122

Query: 155 FSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYS 214
           FSFF+   KFTPF  N++VLLT+ A +L ++ +++     +   Y+ GFL T+ A+  Y+
Sbjct: 123 FSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYA 182

Query: 215 LYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEG 274
             L L++L+++K  +  ++++VL+ Q+    +A+   V+G+F +G++K L KE   +  G
Sbjct: 183 FILPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLG 242

Query: 275 RVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL 318
              + +  +++A+ WQ   +G +GL+F    L     + + LP+
Sbjct: 243 EALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPI 286

May be involved in transport of purine derivatives during pollen germination and tube elongation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
224138012	392	predicted protein [Populus trichocarpa]	0.943	0.770	0.696	1e-119
356565414	390	PREDICTED: probable purine permease 11-l	0.943	0.774	0.671	1e-114
225427292	343	PREDICTED: probable purine permease 9-li	0.775	0.723	0.772	1e-100
413923507	384	hypothetical protein ZEAMMB73_545150 [Ze	0.831	0.692	0.622	7e-96
413923506	482	hypothetical protein ZEAMMB73_545150 [Ze	0.831	0.551	0.625	2e-95
147854853	475	hypothetical protein VITISV_020513 [Viti	0.871	0.587	0.641	8e-95
326502496	387	predicted protein [Hordeum vulgare subsp	0.834	0.689	0.612	6e-94
225453268	374	PREDICTED: probable purine permease 11 [	0.921	0.788	0.609	1e-93
242066332	391	hypothetical protein SORBIDRAFT_04g03140	0.831	0.680	0.603	1e-92
357446895	382	hypothetical protein MTR_2g015470 [Medic	0.943	0.790	0.553	3e-92

>gi|224138012|ref|XP_002326496.1| predicted protein [Populus trichocarpa] gi|222833818|gb|EEE72295.1| predicted protein [Populus trichocarpa]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/316 (69%), Positives = 253/316 (80%), Gaps = 14/316 (4%)

Query: 1   MEAPPALQLQ-TRVNDRELDSHID-TSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAA 58
           ME    ++LQ T  +D+E +S  D +S+N + +  KL HYKWWLRV  Y++ LL GQSAA
Sbjct: 1   MEDAEGIELQITAADDKEPNSSNDASSINNKMQLPKLIHYKWWLRVTCYILFLLSGQSAA 60

Query: 59  TLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDP------------ 106
           TLLG LYYDKGGNSKWMATFVQSAGFPILLP+L  F++   S   T+P            
Sbjct: 61  TLLGGLYYDKGGNSKWMATFVQSAGFPILLPLLFFFTSSINSNTATNPISSSFANKPEGP 120

Query: 107 KISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTP 166
           K+STL  LY+ FG LLTGDN+MYSYGLLYLPVSTYSLLCATQLAFNA FSFFLNSQK +P
Sbjct: 121 KLSTLTFLYIGFGALLTGDNLMYSYGLLYLPVSTYSLLCATQLAFNALFSFFLNSQKLSP 180

Query: 167 FIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEK 226
           F+ NSL+LLT SA+LLAVNADSEN++G+ +  YVIGF CTLGASATYSLYLSL+QLSFEK
Sbjct: 181 FVLNSLILLTASASLLAVNADSENSAGIPRRKYVIGFFCTLGASATYSLYLSLVQLSFEK 240

Query: 227 VIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTA 286
           VI KETFS VL+MQIY SFVATCGCVVGLFAS EW+ L  EM  Y EG+VSYLMTLIWTA
Sbjct: 241 VINKETFSTVLNMQIYPSFVATCGCVVGLFASREWESLENEMKEYKEGKVSYLMTLIWTA 300

Query: 287 VTWQISSVGLLGLVFE 302
           +TWQ+SSVGLLGL+FE
Sbjct: 301 ITWQVSSVGLLGLIFE 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565414|ref|XP_003550935.1| PREDICTED: probable purine permease 11-like [Glycine max]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/314 (67%), Positives = 252/314 (80%), Gaps = 12/314 (3%)

Query: 1   MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATL 60
           ME     QLQ     +  +S  ++++ QQ +  + + YKWWLRV LY++ LLVGQSAATL
Sbjct: 1   MEVVQEQQLQNTDGRKLHNSDRNSNVTQQLQHPRFRKYKWWLRVSLYIIFLLVGQSAATL 60

Query: 61  LGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS-------NGSRSAN----TTDPKIS 109
           LGRLYYD GGNSKWMATFVQSAGFP+LLP+L  F        N + S N     T PK S
Sbjct: 61  LGRLYYDNGGNSKWMATFVQSAGFPVLLPLLFYFPRQTHAKFNNNPSNNDYSYKTKPKFS 120

Query: 110 TLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIF 169
           TLV LY+AFGL+LTGDN+MYSYGLLYLP+STYSLLCATQL FNA FSFFLNSQKFT FI 
Sbjct: 121 TLVFLYLAFGLILTGDNLMYSYGLLYLPLSTYSLLCATQLGFNAVFSFFLNSQKFTAFII 180

Query: 170 NSLVLLTISATLLAVNADS-ENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVI 228
           NS+VLLTISA+LLA+N+DS E+++G+S+  +VIGF CT+GASAT+SLYLSL+QLSF+KVI
Sbjct: 181 NSVVLLTISASLLAINSDSDEDSTGLSREKHVIGFFCTIGASATFSLYLSLVQLSFQKVI 240

Query: 229 KKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVT 288
           K+ETFS VLDMQ Y SF+ATC CVVGLFASGEWK L+ EM GY +G VSY+MTL+W AVT
Sbjct: 241 KRETFSAVLDMQFYPSFIATCACVVGLFASGEWKSLNNEMKGYDKGSVSYVMTLLWIAVT 300

Query: 289 WQISSVGLLGLVFE 302
           WQISS+G+LGL+FE
Sbjct: 301 WQISSIGMLGLIFE 314

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427292|ref|XP_002278972.1| PREDICTED: probable purine permease 9-like [Vitis vinifera]

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/255 (77%), Positives = 219/255 (85%), Gaps = 7/255 (2%)

Query: 55  QSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSAN-------TTDPK 107
           Q+ ATLLGRLYYDKGGNSKWMATFVQSAGFPILLP+   FS  S+S            P 
Sbjct: 12  QTRATLLGRLYYDKGGNSKWMATFVQSAGFPILLPLFFFFSPTSKSTPISISPSSAKPPS 71

Query: 108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPF 167
            ST++ LY+ FGLLLTGDN+MYSYGLLYLPVSTYSLLCATQLAFNA FSFFLNSQKFT  
Sbjct: 72  FSTILFLYLFFGLLLTGDNLMYSYGLLYLPVSTYSLLCATQLAFNALFSFFLNSQKFTML 131

Query: 168 IFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKV 227
           I NSLVLLTISA+LLAV++DSE+T+G  KG YVIGFLCTLGASATYSLYLSL+QLSF+KV
Sbjct: 132 ILNSLVLLTISASLLAVHSDSEDTTGTPKGKYVIGFLCTLGASATYSLYLSLVQLSFQKV 191

Query: 228 IKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAV 287
           IK+ETF VVL+MQ+Y SFVATC CVVGLFASGEW GLS+EM  Y +G++SYLMTLIWTAV
Sbjct: 192 IKRETFDVVLEMQVYPSFVATCACVVGLFASGEWSGLSEEMKEYEDGKISYLMTLIWTAV 251

Query: 288 TWQISSVGLLGLVFE 302
           TWQISSVGLLGL+FE
Sbjct: 252 TWQISSVGLLGLIFE 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413923507|gb|AFW63439.1| hypothetical protein ZEAMMB73_545150 [Zea mays]

 Score =  356 bits (914), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 168/270 (62%), Positives = 218/270 (80%), Gaps = 4/270 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
           KH+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 45  KHWHWWLMVTLNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 104

Query: 96  NGSRSANTT----DPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAF 151
           + S S  TT    +  ++ +  +YV  GL++  D++MYSYGLLYLPVSTYSL+CA+QLAF
Sbjct: 105 SKSPSTQTTTSNPETSVTKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 164

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFTPFIFNS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 165 NAVFSYVLNAQKFTPFIFNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFALTLGASA 224

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGY 271
           TYSL LSL+Q++FEKVIKKETFSVVL+MQIY++ VAT   ++GLFASGEWK L  EM+ +
Sbjct: 225 TYSLILSLMQVAFEKVIKKETFSVVLNMQIYTALVATVASLIGLFASGEWKTLEGEMHAF 284

Query: 272 GEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
             GRVSY+MTL+WTAV+WQI+SVG++GL+F
Sbjct: 285 SSGRVSYVMTLLWTAVSWQIASVGVVGLIF 314

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413923506|gb|AFW63438.1| hypothetical protein ZEAMMB73_545150 [Zea mays]

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 169/270 (62%), Positives = 220/270 (81%), Gaps = 4/270 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
           KH+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 143 KHWHWWLMVTLNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 202

Query: 96  NGSRSANTT--DPK--ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAF 151
           + S S  TT  +P+  ++ +  +YV  GL++  D++MYSYGLLYLPVSTYSL+CA+QLAF
Sbjct: 203 SKSPSTQTTTSNPETSVTKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 262

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFTPFIFNS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 263 NAVFSYVLNAQKFTPFIFNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFALTLGASA 322

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGY 271
           TYSL LSL+Q++FEKVIKKETFSVVL+MQIY++ VAT   ++GLFASGEWK L  EM+ +
Sbjct: 323 TYSLILSLMQVAFEKVIKKETFSVVLNMQIYTALVATVASLIGLFASGEWKTLEGEMHAF 382

Query: 272 GEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
             GRVSY+MTL+WTAV+WQI+SVG++GL+F
Sbjct: 383 SSGRVSYVMTLLWTAVSWQIASVGVVGLIF 412

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854853|emb|CAN78594.1| hypothetical protein VITISV_020513 [Vitis vinifera]

 Score =  353 bits (905), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 179/279 (64%), Positives = 222/279 (79%)

Query: 23  DTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA 82
           D ++ +Q  F+ LK ++WWL V L +  LL GQ+AA LLGR YYDKGGNSKWMATFVQ+A
Sbjct: 47  DETLTRQSSFIGLKCWQWWLLVALNIFFLLAGQAAAVLLGRFYYDKGGNSKWMATFVQTA 106

Query: 83  GFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYS 142
            FPILL  L    +    + TT P  + L  +Y+A G++L GDNM+YS GLLYL  STYS
Sbjct: 107 AFPILLIPLFLIPSSKEPSTTTPPSWTILASIYIALGVVLAGDNMLYSTGLLYLTASTYS 166

Query: 143 LLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIG 202
           L+CATQLAFNA FSF++NSQKFT  I NS+V+L++SA+L+A+N DSE +SG+SKG Y IG
Sbjct: 167 LICATQLAFNAVFSFYINSQKFTALILNSVVILSLSASLIAINDDSEGSSGISKGKYAIG 226

Query: 203 FLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWK 262
            +CTL ASA YSL LSL+QLSFEKVIKKETFSVVL+MQIY+S VATC  +VGLFASGEWK
Sbjct: 227 IICTLAASALYSLLLSLMQLSFEKVIKKETFSVVLEMQIYTSIVATCASLVGLFASGEWK 286

Query: 263 GLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
            L  EMNG+G+GR+SY+MTL+WTAV WQ+ SVG++GL+F
Sbjct: 287 TLHGEMNGFGKGRISYVMTLVWTAVAWQVCSVGVVGLIF 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326502496|dbj|BAJ95311.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  350 bits (897), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 166/271 (61%), Positives = 222/271 (81%), Gaps = 4/271 (1%)

Query: 35  LKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCF 94
           +KH++WWL V+L +  L+ GQ++ATLLGR YY++GGNSKWM+TFVQ+AGFP+L      F
Sbjct: 47  VKHWQWWLMVVLNMFFLIAGQTSATLLGRFYYNEGGNSKWMSTFVQTAGFPVLFVAQFLF 106

Query: 95  SNGSRSA----NTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLA 150
              S S     ++ +  I  +  +Y+A GL++  D++MYSYGLLYLPVSTYSL+CA+QLA
Sbjct: 107 RPKSPSTQAINSSPEASIIKITLIYIALGLIIAADDLMYSYGLLYLPVSTYSLICASQLA 166

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FNA FS+FLN+QKFTP IFNS++LLT SA+LL V+ DS++TS  S+GN+V+GF+ TLGAS
Sbjct: 167 FNAVFSYFLNAQKFTPLIFNSVLLLTFSASLLGVDEDSQSTSDTSQGNHVLGFVLTLGAS 226

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNG 270
           ATYSL LSL+Q++FEKVIK+ETFSVVL+MQIY++FVAT   +VGLFASGEWK L  EM+ 
Sbjct: 227 ATYSLILSLMQVTFEKVIKRETFSVVLNMQIYTAFVATLASLVGLFASGEWKTLEGEMHV 286

Query: 271 YGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
           +  G+VSY+MTL+WTA++WQI+SVG++GL+F
Sbjct: 287 FSSGKVSYVMTLLWTAISWQIASVGVVGLIF 317

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453268|ref|XP_002266773.1| PREDICTED: probable purine permease 11 [Vitis vinifera]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 181/297 (60%), Positives = 227/297 (76%), Gaps = 2/297 (0%)

Query: 5   PALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRL 64
           PAL +     +  L    D ++ +Q  F+ LK ++WWL V L +  L+ GQ+AA LLGR 
Sbjct: 3   PALDMPAVSAEPILSK--DETLTRQSSFIGLKCWQWWLLVALNIFFLVAGQAAAVLLGRF 60

Query: 65  YYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTG 124
           YYDKGGNSKWMATFVQ+A FPILL  L    +    + TT P  + L  +Y+A G++L G
Sbjct: 61  YYDKGGNSKWMATFVQTAAFPILLIPLFLIPSSKEPSTTTPPSWTILASIYIALGVVLAG 120

Query: 125 DNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV 184
           DNM+YS GLLYL  STYSL+CATQLAFNA FSF++NSQKFT  I NS+V+L++SA+L+A+
Sbjct: 121 DNMLYSTGLLYLTASTYSLICATQLAFNAVFSFYINSQKFTALILNSVVILSLSASLIAI 180

Query: 185 NADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSS 244
           N DSE +SG+SKG Y IG +CTL ASA YSL LSL+QLSFEKVIKKETFSVVL+MQIY+S
Sbjct: 181 NDDSEGSSGISKGKYAIGIICTLAASALYSLLLSLMQLSFEKVIKKETFSVVLEMQIYTS 240

Query: 245 FVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
            VA C  +VGLFASGEWK L  EMNG+G+GR+SY+MTL+WTAV WQ+ SVG++GL+F
Sbjct: 241 IVAACASLVGLFASGEWKTLHGEMNGFGKGRISYVMTLVWTAVAWQVCSVGVVGLIF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242066332|ref|XP_002454455.1| hypothetical protein SORBIDRAFT_04g031400 [Sorghum bicolor] gi|241934286|gb|EES07431.1| hypothetical protein SORBIDRAFT_04g031400 [Sorghum bicolor]

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 163/270 (60%), Positives = 215/270 (79%), Gaps = 4/270 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
           +H+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 52  RHWHWWLMVALNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 111

Query: 96  NGSRSANTT----DPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAF 151
           + S S  TT    +  ++ +  +Y+  GL++  D++MYSYGLLYLPVSTYSL+CA+QLAF
Sbjct: 112 SKSPSTQTTTSNPETSVTKITLIYIVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 171

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFT  I NS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 172 NAVFSYVLNAQKFTALILNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFTLTLGASA 231

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGY 271
           TYSL LSL+Q++FEKVIKKETFSVVL+MQIY++ VAT   +VGLFASGEWK L  EM+ +
Sbjct: 232 TYSLILSLMQVTFEKVIKKETFSVVLNMQIYTALVATIASLVGLFASGEWKTLEGEMHAF 291

Query: 272 GEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
             GR+SY+MTL+WTAV+WQI+SVG++GL+F
Sbjct: 292 SSGRLSYVMTLLWTAVSWQIASVGVVGLIF 321

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446895|ref|XP_003593723.1| hypothetical protein MTR_2g015470 [Medicago truncatula] gi|355482771|gb|AES63974.1| hypothetical protein MTR_2g015470 [Medicago truncatula]

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 170/307 (55%), Positives = 227/307 (73%), Gaps = 5/307 (1%)

Query: 1   MEAPPALQLQTRVNDRELDSHIDTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATL 60
           ME      LQ+  N +  +S I+  + QQ +  + K Y+WW RVILY++ LLVGQS++ L
Sbjct: 1   MEMDQEPHLQSSDNIKVPNSDINIIVTQQLQDPRSKDYRWWFRVILYIIFLLVGQSSSLL 60

Query: 61  LGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLV-----CLY 115
           L RLYYDKGG SKWM +FVQSAGFP+LLP++  F    +  N      S+++      LY
Sbjct: 61  LERLYYDKGGKSKWMISFVQSAGFPLLLPLIFYFKPHDQFKNMFSNDNSSIIKPNFFALY 120

Query: 116 VAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLL 175
           + FGLL+ G  +MYSYGL+YLP+ST+SL+C+T+LAFNA FSFFLNSQ+FT  IFNS+ LL
Sbjct: 121 LGFGLLVEGVYLMYSYGLVYLPLSTFSLICSTELAFNALFSFFLNSQRFTALIFNSVFLL 180

Query: 176 TISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSV 235
           TIS +LLAV++ SE+++ + +  Y++GFL TL A A ++LYL+L+Q SFEK+IK+ETFS 
Sbjct: 181 TISTSLLAVDSISEDSTDLHREKYILGFLFTLCACAAFALYLALVQYSFEKIIKRETFSA 240

Query: 236 VLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVG 295
           +LDMQ Y SF+ATC CVVGLFASGEWK L KEM  +  G+ SY++TL+  +VTWQI  +G
Sbjct: 241 ILDMQFYPSFIATCACVVGLFASGEWKILEKEMEEFANGKKSYIITLVCCSVTWQICYIG 300

Query: 296 LLGLVFE 302
           +LGLVFE
Sbjct: 301 ILGLVFE 307

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
TAIR|locus:2194814	379	PUP11 "AT1G44750" [Arabidopsis	0.840	0.709	0.507	9.6e-73
TAIR|locus:2141907	390	PUP10 "AT4G18210" [Arabidopsis	0.821	0.674	0.516	3.6e-66
TAIR|locus:2138203	361	ATPUP13 "AT4G08700" [Arabidops	0.837	0.742	0.448	2.2e-59
TAIR|locus:1009023376	394	PUP8 "AT4G18195" [Arabidopsis	0.878	0.713	0.435	1.2e-58
TAIR|locus:1009023346	390	PUP7 "AT4G18197" [Arabidopsis	0.878	0.720	0.425	4.6e-57
TAIR|locus:1009023365	377	AT4G18205 "AT4G18205" [Arabido	0.943	0.801	0.408	9.6e-57
TAIR|locus:2141887	387	PUP6 "AT4G18190" [Arabidopsis	0.896	0.741	0.422	1.2e-56
TAIR|locus:2163026	358	PUP12 "AT5G41160" [Arabidopsis	0.846	0.756	0.426	8.6e-56
TAIR|locus:2032148	356	PUP1 "AT1G28230" [Arabidopsis	0.859	0.772	0.333	6.3e-37
TAIR|locus:2032159	351	PUP3 "AT1G28220" [Arabidopsis	0.859	0.783	0.291	4e-35

TAIR|locus:2194814 PUP11 "AT1G44750" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 137/270 (50%), Positives = 187/270 (69%)

Query:    33 LKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LPIL 91
             LKLK ++WW+ V + +  L+ GQ+A+ LLGR YYD+GGNSKWMAT VQ+A FPIL +P+L
Sbjct:    35 LKLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTAAFPILYIPLL 94

Query:    92 CCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXXXX 151
                S+ S  ++ +   +  +V +YV  G+++ GDNM+YS GLLYL  STYSL+CAT    
Sbjct:    95 LLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLYSVGLLYLSASTYSLICATQLAF 154

Query:   152 XXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXX 211
                        KFT  I NS+VLL+ SA L+A+N D++  SGVS+  Y++GF+CT     
Sbjct:   155 NAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAASA 214

Query:   212 XXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGY 271
                         FEK++K+ETFSVVL+MQIY+S VATC  V+GLFASGEW+ L  EM GY
Sbjct:   215 LYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEGY 274

Query:   272 GEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
              +G+ SY++TL+WTAVTWQ+ SVG++GL+F
Sbjct:   275 HKGQASYVLTLVWTAVTWQVCSVGVVGLIF 304

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2141907 PUP10 "AT4G18210" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 139/269 (51%), Positives = 172/269 (63%)

Query:    38 YKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLP--ILCCFS 95
             YK WLRV LY   ++ GQ+ AT+LGR+YYD GGNSKW+AT VQ  GFP+LLP  IL   +
Sbjct:    41 YKRWLRVTLYTFFVISGQTVATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSFKT 100

Query:    96 NGS--RSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXXXXXX 153
             + +  R    T P+   LV  YV  GLL+  D  +YS GLLYLPVSTYSL+CA+      
Sbjct:   101 HATTDRDGKRTSPRNRVLV--YVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNA 158

Query:   154 XXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXXXX 213
                      K TP I NSL LLTIS+TLLA N +  +++ V+KG YV GF+CT       
Sbjct:   159 FFSYFLNSQKLTPIILNSLFLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGY 218

Query:   214 XXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGE 273
                       F KV+KK+ FS V+DM IY S VA+C  VVGLFAS EWK LS EM+ Y  
Sbjct:   219 GLVLSLQQLAFLKVLKKQNFSEVMDMIIYVSLVASCVSVVGLFASSEWKTLSSEMDNYKH 278

Query:   274 GRVSYLMTLIWTAVTWQISSVGLLGLVFE 302
             G+VSY+M L+WTAVTWQ+ S+G  GL+FE
Sbjct:   279 GKVSYIMNLVWTAVTWQVFSIGGTGLIFE 307

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005737 "cytoplasm" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2138203 ATPUP13 "AT4G08700" [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 122/272 (44%), Positives = 175/272 (64%)

Query:    31 RFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LP 89
             + +KLK   WW+ V + +  L+  Q+ A LLGR YY++GGNSKW++T VQ+ GFPIL LP
Sbjct:    25 QLMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYNEGGNSKWISTLVQTCGFPILYLP 84

Query:    90 ILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXX 149
             +  CF   S S++++     TLV +Y++ G  +  DN++YS+GLLYL  STYS+LC++  
Sbjct:    85 L--CFLPASHSSSSSC-SFKTLVWIYLSLGFAIGLDNLLYSFGLLYLSASTYSILCSSQL 141

Query:   150 XXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXX 209
                          K T  I  S++ L++SA L++++ DS + SG SK +Y+IG LCT   
Sbjct:   142 AFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDDDSNSPSGDSKWSYLIGCLCTVFA 201

Query:   210 XXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMN 269
                           FE V+K ETFS+VL+MQIY+S VA+C  V+GLFASGEW  LS EM 
Sbjct:   202 SLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEME 261

Query:   270 GYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
              + EG+V Y++TL+ TAV+WQ+ SVG + L+F
Sbjct:   262 EFHEGQVIYVLTLVGTAVSWQLGSVGAVALIF 293

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023376 PUP8 "AT4G18195" [Arabidopsis thaliana (taxid:3702)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 126/289 (43%), Positives = 174/289 (60%)

Query:    36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
             K+YK WLR+ +YV  +L  Q+ +T+LGR+YY+ GG S WM T VQ  GFP+L   L  F 
Sbjct:    40 KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLF--LFRFF 97

Query:    96 NGSRSANTTDP---KISTLVCL---YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXX 149
             + +++   T+    K S+   L   Y+  GLL++ ++ M S GLLYLPVST+SL+ A+  
Sbjct:    98 SQTKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQL 157

Query:   150 XXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXX 209
                          KFTPFI NSL LLTIS+ LL VN DSENT+ VS+  YVIG +CT   
Sbjct:   158 AFTAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGA 217

Query:   210 XXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMN 269
                             KV+KK+TFS V D+  Y S VA+C  ++GLFASGEWK L+ EM 
Sbjct:   218 SAGIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVASCVVLIGLFASGEWKTLTSEME 277

Query:   270 GYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL 318
              Y  G+V Y+MTL   A++WQ+ ++G++GL+FE   +       + LP+
Sbjct:   278 NYKLGKVPYVMTLASIAISWQVYTIGVVGLIFESSSVFSNSITAVGLPI 326

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023346 PUP7 "AT4G18197" [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 123/289 (42%), Positives = 173/289 (59%)

Query:    36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS 95
             ++YK WLRV +YV+ +L  Q  AT+LGRLYY+ GGNS ++ T +Q  GFP+L  +L  F 
Sbjct:    37 ENYKRWLRVSIYVIFVLFCQPLATILGRLYYENGGNSTYVVTLLQLIGFPVL--VLFRFF 94

Query:    96 NGSRSANTTD------PKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXX 149
             +  R   +TD      P  +TL  +Y+  GLL++    + + GLLYLPVST+SL+ A+  
Sbjct:    95 SRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFSLILASQL 154

Query:   150 XXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXX 209
                          KFTP I +SL+LLT+S+ LL VN DSEN++ VS+  YVIGF+CT   
Sbjct:   155 AFTAFFSYFLNSQKFTPLIVSSLLLLTVSSALLVVNTDSENSTNVSRVQYVIGFICTIGA 214

Query:   210 XXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMN 269
                           F KV  K T S V D+ IY S VA+C  ++GLFASGEW+ L  EM 
Sbjct:   215 SAGIGLLLSLIQMLFRKVFTKHTSSAVTDLAIYQSLVASCVVLIGLFASGEWETLPSEMR 274

Query:   270 GYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL 318
              Y  G+VSY++TL   A++WQ+ ++GL+GL+FE   +       + LP+
Sbjct:   275 NYKLGKVSYVLTLASAAISWQVYTLGLVGLIFESSSVFSNSITAVGLPI 323

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023365 AT4G18205 "AT4G18205" [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 127/311 (40%), Positives = 178/311 (57%)

Query:    15 DRELDSHI-DTSMNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSK 73
             D+ L++++ D    + +   + K+ K WLRV +Y + ++  Q  AT+LGRLYY+ GG S 
Sbjct:    12 DQNLEANLLDHEETESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKST 71

Query:    74 WMATFVQSAGFPILLPILCCFSNGSRSANTTD------PKISTLVCLYVAFGLLLTGDNM 127
             ++ T +Q  GFP+L  IL  F +  R   +TD      P  +TL  +Y+  GLL++    
Sbjct:    72 YVVTLLQLIGFPVL--ILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAY 129

Query:   128 MYSYGLLYLPVSTYSLLCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNAD 187
             + + GLLYLPVST+SL+ A+               KFTP I NSL LLT+S+ LL VN D
Sbjct:   130 LSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTD 189

Query:   188 SENTSGVSKGNYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVA 247
             SENT+ VS+  YVIGF+CT                 F KV  K T S VLD+  Y S VA
Sbjct:   190 SENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVA 249

Query:   248 TCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLD 307
             TC  ++GLFASGEW+ L  EM  Y  G+VSY++TL   A+ WQ+ +VG +GL+FE   + 
Sbjct:   250 TCVVLIGLFASGEWRTLPSEMRNYKLGKVSYILTLASAAIFWQVYTVGCVGLIFESSSVF 309

Query:   308 GAEDLRIFLPL 318
                   + LP+
Sbjct:   310 SNSITAVGLPI 320

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2141887 PUP6 "AT4G18190" [Arabidopsis thaliana (taxid:3702)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 125/296 (42%), Positives = 165/296 (55%)

Query:    16 RELDSHIDTSMNQQWRFLKLKH-YKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKW 74
             +EL  H++     ++   +  H Y W LRV LYV  LL G++ ATLLGRLYY+KGG S W
Sbjct:     9 QELHLHVNGEPEGKFSTEERSHKYSWRLRVSLYVTLLLAGETIATLLGRLYYEKGGKSTW 68

Query:    75 MATFVQSAGFPILLPILCCFSNGSRSANTTDPKIS----TLVCLYVAFGLLLTGDNMMYS 130
             + T VQ  GFP+ LP             T   K +    TL  +Y+  GLL+ G  ++YS
Sbjct:    69 LETLVQLVGFPLTLPCYYYLKPEPSKTKTITKKTTSSFLTLSLVYIGLGLLVAGHCILYS 128

Query:   131 YGLLYLPVSTYSLLCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSEN 190
             +GLLYLPVST+SL+ A+               K TPFI NSLVLLTIS+TLL +  + E+
Sbjct:   129 FGLLYLPVSTFSLISASQLAFNAVFSYFLNSQKITPFILNSLVLLTISSTLLVIQHEPES 188

Query:   191 TSGVSKG----NYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFV 246
              S  SK      YVIG++C                  FEK++KK TF  +LDM  Y S V
Sbjct:   189 PSSTSKSAAKSKYVIGYICAVGSSAGYSLVLSLTDYAFEKILKKYTFKAILDMATYPSMV 248

Query:   247 ATCGCVVGLFASGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFE 302
             ATC  VVGLF SG WK LS EM  +  G+ SY++  I + ++WQ   +G +GL+ E
Sbjct:   249 ATCVVVVGLFGSGGWKKLSTEMEEFQLGKSSYILINIGSTISWQACLIGSVGLIIE 304

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2163026 PUP12 "AT5G41160" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 116/272 (42%), Positives = 169/272 (62%)

Query:    31 RFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LP 89
             + +KL   +WW+ V + +  L+  Q+ + LLGR YY++GGNSKW++T VQ+ GFPIL LP
Sbjct:    19 QLMKLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKWISTLVQTGGFPILYLP 78

Query:    90 ILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATXX 149
             +    ++ S S++++     TLV +Y++ G  +  DN +YS GLLYL  STYS+LCA+  
Sbjct:    79 LSLLPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGLLYLSASTYSILCASQL 138

Query:   150 XXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXX 209
                          K T  IF S++ L+ISA L++++ DS + SG SK +Y+IG  C    
Sbjct:   139 AFNGVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSGDSKWSYLIGCFCAVFA 198

Query:   210 XXXXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMN 269
                           FEKV+K ET S+VL+MQIY+S VA+C  V+GLFASGEW  LS EM 
Sbjct:   199 SLIYSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVASCVAVIGLFASGEWMLLSVEME 258

Query:   270 GYGEGRVSYLMTLIWTAVTWQISSVGLLGLVF 301
              + EG+V Y++TL+  AV+ Q+  VG + L+F
Sbjct:   259 EFQEGQVIYVLTLVGAAVSCQLGCVGAVSLIF 290

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005739 "mitochondrion" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2032148 PUP1 "AT1G28230" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 96/288 (33%), Positives = 151/288 (52%)

Query:    44 VILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILL-PILCCFSN---GSR 99
             +I+  + L +G     LL RLY+  GG   W  +F+ +AGFPI+L P+L  F +    +R
Sbjct:     6 IIINCIILTIGTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFLSRRRSNR 65

Query:   100 SANTTDPKISTLVCL-----YVAFGL--LLTG-DNMMYSYGLLYLPVSTYSLLCATXXXX 151
             + N  + K  T + L     ++A  +  LLTG DN +YSYGL YLPVST SL+  T    
Sbjct:    66 NPNNAENKRKTKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVSTSSLIIGTQLAF 125

Query:   152 XXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXX 211
                        KFTPF  N++VLLT+   +LA+++D +  +  SK  YV+GFL T     
Sbjct:   126 NALFAFLLVKQKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEYVVGFLMTVVAAL 185

Query:   212 XXXXXXXXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGY 271
                         ++K  ++ TF +VL++Q+     AT  CV+G+F  G++K +++E   +
Sbjct:   186 LYAFILPLVELTYKKARQEITFPLVLEIQMVMCLAATFFCVIGMFIVGDFKVIAREAREF 245

Query:   272 G-EGRVSYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL 318
                G V Y   ++ T + WQ   +G +G+VF    L     + + LP+
Sbjct:   246 KIGGSVFYYALIVITGIIWQGFFLGAIGIVFCASSLASGVLISVLLPV 293

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA;IDA

GO:0010184 "cytokinin transport" evidence=IDA

GO:0015211 "purine nucleoside transmembrane transporter activity" evidence=IDA

TAIR|locus:2032159 PUP3 "AT1G28220" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 82/281 (29%), Positives = 146/281 (51%)

Query:    44 VILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LPILCCFSNGSRSAN 102
             VI+  + L +G     L+ RLY++ GG   W +TF+++AGFP++ +P+L  +    RS N
Sbjct:     6 VIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSNN 65

Query:   103 TTDPKISTLVC--LYVA---FGLLLTGDNMMYSYGLLYLPVSTYSLLCATXXXXXXXXXX 157
               D     L+   L +A    G+L   DN +Y+YG+ YLPVST +L+ A+          
Sbjct:    66 VGDSTSFFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAIFSF 125

Query:   158 XXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXXXXXXXX 217
                  KFTPF  N++VLLT+ A +L ++ +++     +   Y+ GFL T           
Sbjct:   126 FMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYAFIL 185

Query:   218 XXXXXXFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRVS 277
                   ++K  +  ++++VL+ Q+    +A+   V+G+F +G++K L KE   +  G   
Sbjct:   186 PLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLGEAL 245

Query:   278 YLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL 318
             + +  +++A+ WQ   +G +GL+F    L     + + LP+
Sbjct:   246 FYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPI 286

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49725	PUP10_ARATH	No assigned EC number	0.5483	0.9343	0.7666	yes	no
O49726	PUP9_ARATH	No assigned EC number	0.5259	0.9406	0.7717	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	1e-15
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	0.002

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 72.2 bits (178), Expect = 1e-15
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEW 261
           GF+  L ASA ++L L L Q   +K  KK T   VL++  Y S VA    + GL  S  +
Sbjct: 1   GFILALAASALFALRLILSQKLLKK--KKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGF 58

Query: 262 KGL-SKEMNGYGEGRVSYLMTLIWTAVTWQISSVGLLGLVFE 302
           K                Y++ L+ + V   + ++   GL+  
Sbjct: 59  KLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGR 100

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA 179
            + T  N +    L  L  +TY +    ++   A FS  +  +K + + + SL+LL +  
Sbjct: 25  FIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLMLGRKLSWYQWASLLLLFLGV 84

Query: 180 TLL-AVNADSE-NTSGVSKGNYVIGFLCTLGA---SATYSLYLSLLQLSFEKVIKKETFS 234
            ++      SE N+   ++ N  +G    L A   S    +Y       FEK++K    S
Sbjct: 85  AIVQLDQKSSETNSKRGAEQNPGLGLSAVLAACFTSGFAGVY-------FEKILKGSNTS 137

Query: 235 V-VLDMQIY--SSFVATCGCVV 253
           + + ++Q+Y    F A   C +
Sbjct: 138 IWIRNIQLYFFGIFFALLTCWL 159

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.86
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.83
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.48
KOG2765	416	consensus Predicted membrane protein [Function unk	99.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.45
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.1
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.07
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.89
PLN00411	358	nodulin MtN21 family protein; Provisional	98.73
PRK11272	292	putative DMT superfamily transporter inner membran	98.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.57
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.48
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.43
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.31
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.29
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.23
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.22
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.21
PRK15430	296	putative chloramphenical resistance permease RarD;	98.16
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.1
PRK11689	295	aromatic amino acid exporter; Provisional	98.02
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.98
KOG1443	349	consensus Predicted integral membrane protein [Fun	97.95
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.89
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.47
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.46
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.32
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.32
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.27
PLN00411	358	nodulin MtN21 family protein; Provisional	97.25
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.05
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.05
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.95
PRK13499	345	rhamnose-proton symporter; Provisional	96.79
PRK11689	295	aromatic amino acid exporter; Provisional	96.75
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	96.72
KOG1582	367	consensus UDP-galactose transporter related protei	96.53
PRK11272	292	putative DMT superfamily transporter inner membran	96.5
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.44
PRK15430	296	putative chloramphenical resistance permease RarD;	96.32
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.3
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.2
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	96.14
COG2962	293	RarD Predicted permeases [General function predict	95.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.72
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	95.65
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	95.45
COG2510	140	Predicted membrane protein [Function unknown]	95.32
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.07
PRK11431	105	multidrug efflux system protein; Provisional	95.0
COG0697	292	RhaT Permeases of the drug/metabolite transporter	94.81
PRK09541	110	emrE multidrug efflux protein; Reviewed	94.8
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.5
COG2076	106	EmrE Membrane transporters of cations and cationic	94.31
PRK13499	345	rhamnose-proton symporter; Provisional	94.08
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.02
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	93.71
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	92.25
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	91.43
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	91.28
KOG2766	336	consensus Predicted membrane protein [Function unk	91.23
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	90.45
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.2
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	89.4
KOG1581	327	consensus UDP-galactose transporter related protei	89.02

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.86  E-value=5.9e-21  Score=185.30  Aligned_cols=170  Identities=20%  Similarity=0.251  Sum_probs=150.6

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCC
Q 020855          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS  188 (320)
Q Consensus       109 ~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s  188 (320)
                      |+=..--.++.++|+.||.|+-+++.|||++||++.+|.|+.+||+|++++++||+++.||.|+++|++|+++++++..+
T Consensus        89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            33445566789999999999999999999999999999999999999999999999999999999999999999966544


Q ss_pred             CCC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEeh-hHHHHHHHHHHHHHhHhhccCCccchh
Q 020855          189 ENT--SGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLD-MQIYSSFVATCGCVVGLFASGEWKGLS  265 (320)
Q Consensus       189 ~~~--~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vle-mQi~~slvAt~~~~vGl~~sgd~~~i~  265 (320)
                      ..+  ++.+..+.+.|+.+.++||.++|+    .+.+|||++|+..-++|++ +|+  ++++..++.+++..+ ||+++.
T Consensus       169 ~~~a~~~~~~~n~~~G~~avl~~c~~Sgf----AgvYfEkiLK~s~~s~wi~NiqL--~~~g~~f~~l~~~~~-d~~~i~  241 (345)
T KOG2234|consen  169 PTGAKSESSAQNPFLGLVAVLVACFLSGF----AGVYFEKILKGSNVSLWIRNIQL--YFFGILFNLLTILLQ-DGEAIN  241 (345)
T ss_pred             CCCccCCCcccchhhhHHHHHHHHHHHHH----HHHHHHHHHhcCCchHHHHHHHH--HHHHHHHHHHHHhhc-cccccc
Confidence            333  367788999999999999999999    8999999999999999998 999  889999999999999 999998


Q ss_pred             HhhcccCCcceeeehhHHHHHHHHHH
Q 020855          266 KEMNGYGEGRVSYLMTLIWTAVTWQI  291 (320)
Q Consensus       266 ~E~~~F~~G~~~Y~~~lv~~av~WQ~  291 (320)
                        ..+|..|.+..+    |..|.+|.
T Consensus       242 --~~gff~G~s~~v----w~vVl~~a  261 (345)
T KOG2234|consen  242 --EYGFFYGYSSIV----WLVVLLNA  261 (345)
T ss_pred             --cCCccccccHHH----HHHHHHHh
Confidence              789999998754    55555554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.83  E-value=1.1e-19  Score=169.06  Aligned_cols=172  Identities=23%  Similarity=0.342  Sum_probs=144.6

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       108 ~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      .+|-...+++++++++.+|.++-++++|+|++||++++|+|+.+||+|+++++|||+++.||.|++++++|.++.+.++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            35778899999999999999999999999999999999999999999999999999999999999999999999987664


Q ss_pred             CCC--CC------CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEeh-hHHHHHHHHHHHHHhHhhcc
Q 020855          188 SEN--TS------GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLD-MQIYSSFVATCGCVVGLFAS  258 (320)
Q Consensus       188 s~~--~~------~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vle-mQi~~slvAt~~~~vGl~~s  258 (320)
                      .++  ++      +.++.++.+|+.+++.++.++|+    ...++||++|++..+.+++ +|+  ++.+.++..++++..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~----agVy~E~~lK~~~~s~~~~N~qL--~~~gi~~~~~~~~~~  166 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGF----AGVYFEKLLKRSNVSLWIQNMQL--YLFGILFNLLALLLS  166 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHH----HHHHHHHHhcccchhHHHHHHHH--HHHHHHHHHHHHhcc
Confidence            331  11      12356789999999999999999    7777899999988788886 888  678888888887776


Q ss_pred             CCccchhHhhcccCCcceeeehhHHHHHHHHHHH
Q 020855          259 GEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQIS  292 (320)
Q Consensus       259 gd~~~i~~E~~~F~~G~~~Y~~~lv~~av~WQ~~  292 (320)
                       ||+++.  .++|.+|.+..    +|..|..|..
T Consensus       167 -~~~~~~--~~g~f~G~~~~----~~~~i~~~a~  193 (244)
T PF04142_consen  167 -DGSAIS--ESGFFHGYSWW----VWIVIFLQAI  193 (244)
T ss_pred             -cccccc--cCCchhhcchH----HHHHHHHHHH
Confidence             887765  45799998653    5566666653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.48  E-value=2.5e-12  Score=125.43  Aligned_cols=195  Identities=18%  Similarity=0.216  Sum_probs=145.6

Q ss_pred             chHHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhcc
Q 020855           56 SAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLY  135 (320)
Q Consensus        56 ~~~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~y  135 (320)
                      ..+++|.+-    |=+-+..+++..=..-.+..-|..+.++.+   +......++--.-|+.+|++....|++...|+.|
T Consensus        30 ~~s~~l~~~----~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~---~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~y  102 (334)
T PF06027_consen   30 TFSSLLANK----GVNIPTFQSFFNYVLLALVYTPILLYRRGF---KKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQY  102 (334)
T ss_pred             HHHHHHHhc----CccCcHHHHHHHHHHHHHHHhhhhhhcccc---ccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            444555443    666688888766544333333333322111   1111112344467889999999999999999999


Q ss_pred             CchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 020855          136 LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSL  215 (320)
Q Consensus       136 LpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~iGf~~tL~Asal~gL  215 (320)
                      .++++.+++.++-..|+++++++++|+|+++.++.++.+...|.+++...|....+++.+..+.++|..+++.|+.+||+
T Consensus       103 TsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~  182 (334)
T PF06027_consen  103 TSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAV  182 (334)
T ss_pred             ccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998877644333344556789999999999999999


Q ss_pred             HHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccchh
Q 020855          216 YLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLS  265 (320)
Q Consensus       216 ~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i~  265 (320)
                      +-.+.    ||..|+.+   ..|+.-..++++++++.+-+++= |+++++
T Consensus       183 ~nV~~----E~~v~~~~---~~~~lg~~Glfg~ii~~iq~~il-e~~~i~  224 (334)
T PF06027_consen  183 SNVLE----EKLVKKAP---RVEFLGMLGLFGFIISGIQLAIL-ERSGIE  224 (334)
T ss_pred             HHHHH----HHhcccCC---HHHHHHHHHHHHHHHHHHHHHhe-ehhhhh
Confidence            77666    55555555   46888888999999998877664 776654

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.46  E-value=1.2e-12  Score=128.71  Aligned_cols=193  Identities=18%  Similarity=0.238  Sum_probs=153.2

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCC
Q 020855          110 TLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (320)
Q Consensus       110 ~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~  189 (320)
                      +.+..+..+|++|.+.||.|+.++.|..|+..+++.+|.-.||..++.+...+|||..++.+|.+...|.+++..+++..
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            78889999999999999999999999999999999999999999999999999999999999999999988887766544


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHh---hccCCccchhH
Q 020855          190 NTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGL---FASGEWKGLSK  266 (320)
Q Consensus       190 ~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl---~~sgd~~~i~~  266 (320)
                       .++.+.++..+|.+.++.+|++||.|..+.    +|-..++.  --++||++.++++-.-.+.+.   ++= |+-  . 
T Consensus       237 -~~~~~a~~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL-~~~--~-  305 (416)
T KOG2765|consen  237 -NSDLPASRPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIIL-DFF--G-  305 (416)
T ss_pred             -cccCCccchhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHHHHHHHHHhHHHHHH-HHh--c-
Confidence             445566778999999999999999999988    66555541  267899999988865555443   222 111  1 


Q ss_pred             hhcccC---Cccee--eehhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhHhhccCc
Q 020855          267 EMNGYG---EGRVS--YLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFLPL  318 (320)
Q Consensus       267 E~~~F~---~G~~~--Y~~~lv~~av~WQ~~~~G~~Glif~~SsL~sgv~~~~~lp~  318 (320)
                       .++|.   .++..  -...++++.++=-+|..|+    +++|+|.+-+-+++.+|+
T Consensus       306 -~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPL  357 (416)
T KOG2765|consen  306 -EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPL  357 (416)
T ss_pred             -cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeH
Confidence             23442   22322  2345788888876776664    689999999888888886

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.45  E-value=5e-12  Score=119.51  Aligned_cols=244  Identities=16%  Similarity=0.153  Sum_probs=180.3

Q ss_pred             HHhHHHHhHhCCCC-chhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhccC
Q 020855           58 ATLLGRLYYDKGGN-SKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYL  136 (320)
Q Consensus        58 ~~LL~r~Yf~~gG~-s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~yL  136 (320)
                      +-+..++.-.+.++ ..|+-+++|.+.-.+.-.+......++  +.+..|     ..-|+.++++....+.+-+.++.|+
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--KSRKIP-----LKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--CCCcCh-----HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            45566666666666 799999999998887666554432211  112222     2345666788888889999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCC-CCCCcchHHHHHHHHHHHHHHHH
Q 020855          137 PVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS-GVSKGNYVIGFLCTLGASATYSL  215 (320)
Q Consensus       137 pvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~-~~s~~~y~iGf~~tL~Asal~gL  215 (320)
                      |++|+.++-++++++++++++++.|+|.++.++.+++++++|.++.+++++++++. +..+.....|..+.+.+-++.|+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~  168 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF  168 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999887665543 33333344599999999999999


Q ss_pred             HHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhc--cCCccchhHhhcccCCcceeeehhHHHHHHHHHHHH
Q 020855          216 YLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFA--SGEWKGLSKEMNGYGEGRVSYLMTLIWTAVTWQISS  293 (320)
Q Consensus       216 ~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~--sgd~~~i~~E~~~F~~G~~~Y~~~lv~~av~WQ~~~  293 (320)
                      ....-|..++|.. ++    ..|+-.+..+.++++....++.  .||+.+-    .+|-.....-+.-+....++=-++.
T Consensus       169 ~~~~qe~~~~~~~-~~----~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~~p~~~~~l~~~s~~~~~g~  239 (303)
T PF08449_consen  169 TGVYQEKLFKKYG-KS----PWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISAHPSVLLYLLLFSLTGALGQ  239 (303)
T ss_pred             HHHHHHHHHHHhC-Cc----HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            8888888777643 33    2689999999999999999999  8888553    2332222223334444444444444


Q ss_pred             hhhhhhhhhhhhhhhhhhHhhccC
Q 020855          294 VGLLGLVFEPGLLDGAEDLRIFLP  317 (320)
Q Consensus       294 ~G~~Glif~~SsL~sgv~~~~~lp  317 (320)
                      .+..-++=..|++...++.+++-+
T Consensus       240 ~~i~~~~~~~~al~~t~v~t~Rk~  263 (303)
T PF08449_consen  240 FFIFYLIKKFSALTTTIVTTLRKF  263 (303)
T ss_pred             HHHHHHHHhcCchhhhhHHHHHHH
Confidence            455556777888888888887643

; GO: 0055085 transmembrane transport

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.10  E-value=3.7e-08  Score=92.50  Aligned_cols=190  Identities=16%  Similarity=0.092  Sum_probs=128.5

Q ss_pred             HHhHHHHhHhCCCCchhHHHHHHhhc-hhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhccC
Q 020855           58 ATLLGRLYYDKGGNSKWMATFVQSAG-FPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYL  136 (320)
Q Consensus        58 ~~LL~r~Yf~~gG~s~Wl~t~vQtaG-fPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~yL  136 (320)
                      -.++.+.=. ++.+-++..++.|-.. ..++.+. .....+++     .+..+|-....+.+|++.+.++.+.++|+.|.
T Consensus        17 ~~~~NK~~l-~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~   89 (302)
T TIGR00817        17 FNIYNKKLL-NVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKR-----LKISSALLKLLLPVAIVHTIGHVTSNVSLSKV   89 (302)
T ss_pred             HHHHHHHHH-hhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            334444333 3457788888888653 3333222 11111111     11223444555667777788888999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 020855          137 PVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLY  216 (320)
Q Consensus       137 pvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~iGf~~tL~Asal~gL~  216 (320)
                      ++++++++.+++-.|++++++++.|||+++.++.++++.++|.++... +  +     . +....|++..+.|+..++++
T Consensus        90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~-~--~-----~-~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD-T--E-----L-SFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC-C--c-----c-cccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999987531 1  1     1 11357999999999999996


Q ss_pred             HHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccchhHhh
Q 020855          217 LSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEM  268 (320)
Q Consensus       217 l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i~~E~  268 (320)
                      .-..    ||..+++.++ .+++..+....+.++.+...+..+|......|.
T Consensus       161 ~v~~----k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~  207 (302)
T TIGR00817       161 NIFS----KKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGF  207 (302)
T ss_pred             HHHH----HHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHH
Confidence            5554    6655422221 356667777777777777666665544444333

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.07  E-value=7.2e-08  Score=93.75  Aligned_cols=202  Identities=12%  Similarity=0.085  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHHhccchHHhHHHHhHhCCCCchhHHHHHHhh-chhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHH
Q 020855           42 LRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGL  120 (320)
Q Consensus        42 ~lv~~~~~~ll~G~~~~~LL~r~Yf~~gG~s~Wl~t~vQta-GfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~  120 (320)
                      +.+.+.++.-...+....+..+.=.+. -+-+|..++.|-. ++-+..+.....++++++    -+..++-..-.+.+|+
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~llp~gl  122 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPR----IKSLKLFLKNFLPQGL  122 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHHHH
Confidence            344445555555566666666655544 3448999999965 454443333222222111    1111222233334455


Q ss_pred             HHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchH
Q 020855          121 LLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYV  200 (320)
Q Consensus       121 l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~  200 (320)
                      +....+.....|+++.|+|.++++-++.=+||+++++++.|||+++.++.++++.++|..+...++        . +...
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~--------~-~~~~  193 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE--------L-HFTW  193 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc--------c-hhHH
Confidence            444445555599999999999999999999999999999999999999999999999999965321        1 1247


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cceeEEehhHHHHHHHHHHHHHhHhhcc
Q 020855          201 IGFLCTLGASATYSLYLSLLQLSFEKVIKK-ETFSVVLDMQIYSSFVATCGCVVGLFAS  258 (320)
Q Consensus       201 iGf~~tL~Asal~gL~l~L~ql~feKv~k~-~t~~~vlemQi~~slvAt~~~~vGl~~s  258 (320)
                      .|+++++.|++.++++.-+.+...++...+ +.+. .+++..+..+++.++++-..+..
T Consensus       194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~  251 (350)
T PTZ00343        194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFF  251 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999888885544331100 0111 22344444666666665544433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.89  E-value=2.7e-07  Score=83.68  Aligned_cols=127  Identities=19%  Similarity=0.216  Sum_probs=95.3

Q ss_pred             HHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcch
Q 020855          120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNY  199 (320)
Q Consensus       120 ~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y  199 (320)
                      +..+.++.+|-+|+.|.|+++-+++.+++=.||++++.++.|||.++.++.++++..+|..++..+++        .+.+
T Consensus        55 ~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------~~~~  126 (260)
T TIGR00950        55 LQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------LSIN  126 (260)
T ss_pred             HHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------cccc
Confidence            34567889999999999999999999999999999999999999999999999999999998763321        1235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccC
Q 020855          200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASG  259 (320)
Q Consensus       200 ~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sg  259 (320)
                      ..|+...+.|++.++.+....    ||..++.+.. ...+..+..+++++++..-....+
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~----k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~  181 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLY----KRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG  181 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----hHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999999999999976665    6544332211 112221335666666655555443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.73  E-value=2.3e-06  Score=84.13  Aligned_cols=164  Identities=14%  Similarity=0.073  Sum_probs=110.2

Q ss_pred             hccchHHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhh
Q 020855           53 VGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYG  132 (320)
Q Consensus        53 ~G~~~~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~g  132 (320)
                      ++..+=..+.|.-+++|=+..-+..+=-..+..+++|..+..+++++    .++..+|.....+.+|++-...+.++.+|
T Consensus        23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~----~~~~~~~~~~~l~l~g~~g~~~~~~~~~g   98 (358)
T PLN00411         23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS----LPPLSVSILSKIGLLGFLGSMYVITGYIG   98 (358)
T ss_pred             HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcc----cCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445567888888666666554444444445555443333221111    11112233333444555544556678899


Q ss_pred             hccCchhhHHHHHhhhhHHHHHHHHHH------hccCCchHHHHHHHHHHHHHHHhhccCCCC---------------C-
Q 020855          133 LLYLPVSTYSLLCATQLAFNAFFSFFL------NSQKFTPFIFNSLVLLTISATLLAVNADSE---------------N-  190 (320)
Q Consensus       133 l~yLpvsT~sLi~sTQL~FTAiFs~~i------~~qkft~~~insvVLLt~~a~LL~l~~~s~---------------~-  190 (320)
                      ++|.|++..+++.+++=+||+++++++      .++|.++.++.++++..+|+.++..+.+.+               + 
T Consensus        99 l~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~  178 (358)
T PLN00411         99 IEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSP  178 (358)
T ss_pred             HhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccccc
Confidence            999999999999999999999999999      699999999999999999999876543211               0 


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 020855          191 TSGVSKGNYVIGFLCTLGASATYSLYLSLL  220 (320)
Q Consensus       191 ~~~~s~~~y~iGf~~tL~Asal~gL~l~L~  220 (320)
                      +......+..+|..+.++|++.++++.-+.
T Consensus       179 ~~~~~~~~~~lG~~l~l~aa~~wa~~~il~  208 (358)
T PLN00411        179 PLSSSNSDWLIGGALLTIQGIFVSVSFILQ  208 (358)
T ss_pred             ccCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            111223345779999999999999987666

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.66  E-value=1.2e-05  Score=75.58  Aligned_cols=163  Identities=17%  Similarity=0.097  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHHHhccchHHhHHHHhHhCCCCchhHHHHHHhh-chhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHH
Q 020855           39 KWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPILCCFSNGSRSANTTDPKISTLVCLYVA  117 (320)
Q Consensus        39 ~~w~lv~~~~~~ll~G~~~~~LL~r~Yf~~gG~s~Wl~t~vQta-GfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~  117 (320)
                      |.-+-++...+++.+=-..+.+..|.=.+  +-+++..+..... +..++++ ++..++++    .  + .+|.......
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~-~~~~~~~~----~--~-~~~~~~~~~~   73 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLA-FLLLRGHP----L--P-TLRQWLNAAL   73 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHH-HHHHhCCC----C--C-cHHHHHHHHH
Confidence            33444445555544444567777785444  4566666666655 4444444 33322211    1  1 1223333455


Q ss_pred             HHHHH-HHhHHHHHhhh-ccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 020855          118 FGLLL-TGDNMMYSYGL-LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS  195 (320)
Q Consensus       118 lG~l~-a~~N~lYa~gl-~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s  195 (320)
                      .|.+. ...+.++.++. .+.|++..+++..++=.|+++++.+ +|||.++.++.++++-.+|..++..+++.       
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~-------  145 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL-------  145 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc-------
Confidence            66554 45667777888 9999999999999999999999986 69999999999999999998887433211       


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHH
Q 020855          196 KGNYVIGFLCTLGASATYSLYLSLL  220 (320)
Q Consensus       196 ~~~y~iGf~~tL~Asal~gL~l~L~  220 (320)
                       +....|....+.|+..|+++.-..
T Consensus       146 -~~~~~G~l~~l~a~~~~a~~~~~~  169 (292)
T PRK11272        146 -SGNPWGAILILIASASWAFGSVWS  169 (292)
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHH
Confidence             113579999999999999976554

>TIGR00803 nst UDP-galactose transporter

Probab=98.57  E-value=4.5e-07  Score=81.89  Aligned_cols=179  Identities=16%  Similarity=0.078  Sum_probs=120.6

Q ss_pred             HHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCc
Q 020855          118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG  197 (320)
Q Consensus       118 lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~  197 (320)
                      +..+++.+|.+.-+++.+++..+++.. +.|++.++++...+.++|++..|+-++.++..|....+.+++.++  ....+
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~--~~~~g   81 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK--TLMFG   81 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc--ccccc
Confidence            466788888888899999999999999 999999999999999999999999999999998887665443322  22334


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEeh-hHHHHHHHHHHHHHhHhhccCCccchhHhhcccCCcce
Q 020855          198 NYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLD-MQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYGEGRV  276 (320)
Q Consensus       198 ~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vle-mQi~~slvAt~~~~vGl~~sgd~~~i~~E~~~F~~G~~  276 (320)
                      ..+.|..+.++|+...|+    .-.+.||..|+.+-....+ +|+  .+........++..+ |++.++  ..+|..|..
T Consensus        82 ~~~~g~~~~l~a~~~~~~----~~~y~e~~~k~~~~~~~~~~~~l--~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~  152 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGF----AGVYFEKILKDGDTMFWSRNLQL--PLFGLFSTFSVLLWS-DGTLIS--NFGFFIGYP  152 (222)
T ss_pred             cHHHHHHHHHHHHHHHhh----hHHHHHHcccCCCCchHHHHHHH--HHHHHHHHHHHHhhc-ccchhh--ccCcccCCc
Confidence            678999999999999888    5555677666543333332 444  334444445555554 554444  245667766


Q ss_pred             eeehhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 020855          277 SYLMTLIWTAVTWQISSVGLLGLVFEPGLLDGAED  311 (320)
Q Consensus       277 ~Y~~~lv~~av~WQ~~~~G~~Glif~~SsL~sgv~  311 (320)
                      ..+..++.+...=|.|   +-+++-..++..-+++
T Consensus       153 ~~~~~~~~~~a~~~~~---v~~vlk~~~~~~~~~~  184 (222)
T TIGR00803       153 TAVWIVGLLNVGGGLC---IGGVVRYADNTTKSFV  184 (222)
T ss_pred             hHHHHHHHHHHhcCce---eeehhHHhHHHHHHHH
Confidence            6655555444333333   2233444444433333

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00688 rarD rarD protein

Probab=98.48  E-value=1.1e-05  Score=74.03  Aligned_cols=149  Identities=12%  Similarity=0.052  Sum_probs=101.4

Q ss_pred             chHHhHHHHhHhCCCCchhHHHHHHh-hchhhHHHHhhhcccCCC-CCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhh
Q 020855           56 SAATLLGRLYYDKGGNSKWMATFVQS-AGFPILLPILCCFSNGSR-SANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGL  133 (320)
Q Consensus        56 ~~~~LL~r~Yf~~gG~s~Wl~t~vQt-aGfPlll~pl~~~~~~~~-~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl  133 (320)
                      ....+..|..  .+ -+.+...+... -|.+++++.....+++++ +++.+.+..++........|++.+.++.+|.+|.
T Consensus        15 g~~~~~~k~~--~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~   91 (256)
T TIGR00688        15 GYMYYYSKLL--KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAV   91 (256)
T ss_pred             HHHHHHHHHh--cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456667752  22 55555555555 356665443333222110 0010111122344455566777889999999999


Q ss_pred             ccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHHHHHHHHH
Q 020855          134 LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATY  213 (320)
Q Consensus       134 ~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~iGf~~tL~Asal~  213 (320)
                      +|.|+++.+++.++.=+|+++++.++.|||+++.++.++++-.+|.+++..+ +++.        .    ++.++|++.|
T Consensus        92 ~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~~--------~----~~~l~aa~~~  158 (256)
T TIGR00688        92 NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGSL--------P----WEALVLAFSF  158 (256)
T ss_pred             HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCCc--------h----HHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999887532 1110        1    3467788888


Q ss_pred             HHHHHHH
Q 020855          214 SLYLSLL  220 (320)
Q Consensus       214 gL~l~L~  220 (320)
                      +++.-..
T Consensus       159 a~~~i~~  165 (256)
T TIGR00688       159 TAYGLIR  165 (256)
T ss_pred             HHHHHHH
Confidence            8866554

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.43  E-value=1.6e-05  Score=75.01  Aligned_cols=112  Identities=15%  Similarity=0.264  Sum_probs=83.7

Q ss_pred             HHHhhhcc-CchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHH
Q 020855          128 MYSYGLLY-LPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCT  206 (320)
Q Consensus       128 lYa~gl~y-LpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~iGf~~t  206 (320)
                      +|-.++.| +|++..+++.+++=.++.++++++.|||+++.++.++++..+|..++..++.++      ......|..++
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G~~l~  148 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLGFMLT  148 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHHHHHH
Confidence            44467776 799999999999999999999999999999999999999999998876332111      11125799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHH
Q 020855          207 LGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATC  249 (320)
Q Consensus       207 L~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~  249 (320)
                      +.|++.++++.-+.    ||..++.+....+.++.+..+++.+
T Consensus       149 l~aal~~a~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~  187 (299)
T PRK11453        149 LAAAFSWACGNIFN----KKIMSHSTRPAVMSLVVWSALIPII  187 (299)
T ss_pred             HHHHHHHHHHHHHH----HHHhcccCccchhHHHHHHHHHHHH
Confidence            99999999977766    5654443333344556555555443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.31  E-value=7.7e-06  Score=64.92  Aligned_cols=118  Identities=16%  Similarity=0.177  Sum_probs=87.8

Q ss_pred             HHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHH-HHHhHHHHHhhhccC
Q 020855           58 ATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLL-LTGDNMMYSYGLLYL  136 (320)
Q Consensus        58 ~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l-~a~~N~lYa~gl~yL  136 (320)
                      ...+.|.-.++ -+..++..+-...+.+ +++...+...++     .....++-....+.+|++ .+..+.+|.+|+++.
T Consensus         6 ~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    6 YSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             HHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            34555555555 5566777777777777 544444433221     111122333445556666 588999999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHh
Q 020855          137 PVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL  182 (320)
Q Consensus       137 pvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL  182 (320)
                      |++..+.+..++..+++++++++.+||+++.++.++++..+|.+++
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.29  E-value=9.1e-05  Score=66.73  Aligned_cols=101  Identities=20%  Similarity=0.277  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHH-HHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCC
Q 020855          114 LYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSF-FLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS  192 (320)
Q Consensus       114 ~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~-~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~  192 (320)
                      ..+.-++..+..+.+|-.+..|+|+++.+++.++.-.|+++++. ++.++|+++.++.++++..+|..++..++..+...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~  151 (292)
T COG0697          72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH
Confidence            44445666778889999999999999999999999999999996 77799999999999999999999877554432211


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 020855          193 GVSKGNYVIGFLCTLGASATYSLYLSLL  220 (320)
Q Consensus       193 ~~s~~~y~iGf~~tL~Asal~gL~l~L~  220 (320)
                            +..|....+.+++.++++....
T Consensus       152 ------~~~g~~~~l~a~~~~a~~~~~~  173 (292)
T COG0697         152 ------SLLGLLLALAAALLWALYTALV  173 (292)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHH
Confidence                  7999999999999999755555

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.23  E-value=2.6e-05  Score=74.00  Aligned_cols=112  Identities=18%  Similarity=0.186  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHh-hhhHHHHHHHHHHhccCCchHH----HHHHHHHHHHHHHhh
Q 020855          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCA-TQLAFNAFFSFFLNSQKFTPFI----FNSLVLLTISATLLA  183 (320)
Q Consensus       109 ~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~s-TQL~FTAiFs~~i~~qkft~~~----insvVLLt~~a~LL~  183 (320)
                      +++....+.-|++++..|+.|-.+.+|+.+++...+++ .|..+..+++.++.|+|.|+.+    +.++++..+|..+++
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            57888899999999999999999999999999999998 9999999999999999999999    999999999999987


Q ss_pred             ccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 020855          184 VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQ  221 (320)
Q Consensus       184 l~~~s~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~q  221 (320)
                      .+++++.. +.++.++..|.+..+.+++.|+++....+
T Consensus       136 ~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~  172 (290)
T TIGR00776       136 RSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAK  172 (290)
T ss_pred             eccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            66433221 11112345699999999999999888885

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.22  E-value=0.00023  Score=66.52  Aligned_cols=98  Identities=9%  Similarity=0.061  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 020855          115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV  194 (320)
Q Consensus       115 y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~  194 (320)
                      .+.-|+..+..++++.+|+.+.|++..+.+..++-.++++++.++.|||+++.++.++++...|..++..+++ ++    
T Consensus        66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~-~~----  140 (281)
T TIGR03340        66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF-AQ----  140 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc-cc----
Confidence            3344556778888888999999999999999999999999999999999999999999999999998764321 11    


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHH
Q 020855          195 SKGNYVIGFLCTLGASATYSLYLSLL  220 (320)
Q Consensus       195 s~~~y~iGf~~tL~Asal~gL~l~L~  220 (320)
                      .   ...|+...+.|+..++.+.-+.
T Consensus       141 ~---~~~g~~~~l~aal~~a~~~i~~  163 (281)
T TIGR03340       141 H---RRKAYAWALAAALGTAIYSLSD  163 (281)
T ss_pred             c---chhHHHHHHHHHHHHHHhhhhc
Confidence            1   1347777888888888866543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.21  E-value=1e-05  Score=66.26  Aligned_cols=75  Identities=20%  Similarity=0.365  Sum_probs=66.9

Q ss_pred             HHHHHHHHHH-HhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCC
Q 020855          114 LYVAFGLLLT-GDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (320)
Q Consensus       114 ~y~~lG~l~a-~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~  189 (320)
                      ..+..|++.. .++.+|.+|.+|.| +..+.+.++.-+|+++++.++.|||+++..+.++.+.++|.++++.++.++
T Consensus        36 ~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   36 WLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence            3455567665 88999999999999 588899999999999999999999999999999999999999999887554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.16  E-value=8.2e-05  Score=70.25  Aligned_cols=91  Identities=11%  Similarity=0.159  Sum_probs=76.1

Q ss_pred             HHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 020855          117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSK  196 (320)
Q Consensus       117 ~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~  196 (320)
                      .-++..+.++.+|-+|..|+|++..+++..+.=+|++++++++.|||+++.++.++++-.+|.+++.-+ +++.      
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~-~~~~------  150 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT-FGSL------  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-cCCc------
Confidence            445667889999999999999999999999999999999999999999999999999999999987532 1110      


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHH
Q 020855          197 GNYVIGFLCTLGASATYSLYLSLL  220 (320)
Q Consensus       197 ~~y~iGf~~tL~Asal~gL~l~L~  220 (320)
                            ....++|++.|+++.-+.
T Consensus       151 ------~~~~l~aa~~~a~~~i~~  168 (296)
T PRK15430        151 ------PIIALGLAFSFAFYGLVR  168 (296)
T ss_pred             ------cHHHHHHHHHHHHHHHHH
Confidence                  135677889999977554

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.10  E-value=9.5e-06  Score=68.14  Aligned_cols=115  Identities=16%  Similarity=0.042  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccchhHhhcccC--Cc-ceee
Q 020855          202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKEMNGYG--EG-RVSY  278 (320)
Q Consensus       202 Gf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i~~E~~~F~--~G-~~~Y  278 (320)
                      |++++++|++++++...++|..++|..++....-.++|+.+++..+++++....+..++++..+.+.+.++  .+ ...+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            89999999999999999999988885333333447899999999999999999999977765554443332  22 5588


Q ss_pred             ehhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhHhhcc
Q 020855          279 LMTLIWTAVTWQISSVGLLGLVFEPGLLDGAEDLRIFL  316 (320)
Q Consensus       279 ~~~lv~~av~WQ~~~~G~~Glif~~SsL~sgv~~~~~l  316 (320)
                      +..++.+++.|.+..+....++-.+|++.-+|+..+--
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~  118 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKR  118 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHH
Confidence            99999999999999999999999999999999887643

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.02  E-value=0.00037  Score=65.80  Aligned_cols=105  Identities=9%  Similarity=0.105  Sum_probs=78.7

Q ss_pred             HHHhHHHHHhhh----ccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCC--CC
Q 020855          122 LTGDNMMYSYGL----LYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG--VS  195 (320)
Q Consensus       122 ~a~~N~lYa~gl----~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~--~s  195 (320)
                      .+..+.++..|.    .+.|+++.+++.+++=+|+++++.++.|||+++.++.++++-.+|.+++..++.+....+  .+
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            445555544444    567888899999999999999999999999999999999999999998764432111100  11


Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 020855          196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKK  230 (320)
Q Consensus       196 ~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~  230 (320)
                      ......|..+.+.|++.|+++.-+.    ||..++
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~----k~~~~~  181 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVT----RKYARG  181 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHH----hhccCC
Confidence            1234579999999999999987777    664433

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.98  E-value=0.0012  Score=62.20  Aligned_cols=117  Identities=21%  Similarity=0.240  Sum_probs=77.3

Q ss_pred             HHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 020855          117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSK  196 (320)
Q Consensus       117 ~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~  196 (320)
                      ..|++.+..|.++-++++|+|++..+++..|+-+|+++++    ++|..+.++  +.+..+|..++..++ .+.     .
T Consensus        76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~~~--~~i~~~Gv~li~~~~-~~~-----~  143 (293)
T PRK10532         76 FYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDFVW--VVLAVLGLWFLLPLG-QDV-----S  143 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHHHH--HHHHHHHHheeeecC-CCc-----c
Confidence            4566678888889899999999999999999988888876    356555554  444456665543221 111     1


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHh
Q 020855          197 GNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVV  253 (320)
Q Consensus       197 ~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~v  253 (320)
                      +....|..+.++|++.|+.+.-+.    ||..++.+.   ..+ .+.+++++++...
T Consensus       144 ~~~~~G~ll~l~aa~~~a~~~v~~----r~~~~~~~~---~~~-~~~~~~~~~~l~~  192 (293)
T PRK10532        144 HVDLTGAALALGAGACWAIYILSG----QRAGAEHGP---ATV-AIGSLIAALIFVP  192 (293)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHH----HHHhccCCc---hHH-HHHHHHHHHHHHH
Confidence            123579999999999999977777    665444432   122 3344555544443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=97.95  E-value=0.0001  Score=72.09  Aligned_cols=153  Identities=18%  Similarity=0.218  Sum_probs=111.1

Q ss_pred             chhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccC
Q 020855          107 KISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (320)
Q Consensus       107 ~~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~  186 (320)
                      ..+|++..+++-    |.|==+-++++.|.|+|-|+.+=++.++|-.+|+.+.--+|+.+.-...+.+...|..+....+
T Consensus        83 ~Lr~~aPtalat----a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks  158 (349)
T KOG1443|consen   83 YLRRLAPTALAT----ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS  158 (349)
T ss_pred             HHHHhhhhhhhh----hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence            356666665544    4455556699999999999999999999999999999999998776666666666655544433


Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccceeEEehhHHHHHHHHHHHHHhHhhccCCccch
Q 020855          187 DSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVI--KKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGL  264 (320)
Q Consensus       187 ~s~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~--k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i  264 (320)
                               .+-.+.||..+++||++.|+=-+..|...+|.-  +++.+.+.-.+|-.|++   .....++...|-...+
T Consensus       159 ---------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~  226 (349)
T KOG1443|consen  159 ---------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLIT  226 (349)
T ss_pred             ---------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccch
Confidence                     224689999999999999999999999999843  67778888788887753   3344555555555444


Q ss_pred             hHhhc-ccCCcc
Q 020855          265 SKEMN-GYGEGR  275 (320)
Q Consensus       265 ~~E~~-~F~~G~  275 (320)
                      ..+.- +++.|.
T Consensus       227 ~s~~f~~~d~~~  238 (349)
T KOG1443|consen  227 SSSIFRFQDTGL  238 (349)
T ss_pred             hhhHHHhcCccH
Confidence            33332 334444

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.89  E-value=1.6e-05  Score=76.53  Aligned_cols=169  Identities=20%  Similarity=0.285  Sum_probs=112.6

Q ss_pred             HHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccC-----C--CCCCCCCCCcch
Q 020855          127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA-----D--SENTSGVSKGNY  199 (320)
Q Consensus       127 ~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~-----~--s~~~~~~s~~~y  199 (320)
                      .+| |++.|+|.+-.++|.-+.=.||++|++.++|+|||++.....+....|++|+.-++     +  +++.+.++  ..
T Consensus       113 lmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~--~~  189 (346)
T KOG4510|consen  113 LMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE--YD  189 (346)
T ss_pred             HHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc--cc
Confidence            466 99999999999999999999999999999999999999999988888888776332     1  12211111  11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccc----------------
Q 020855          200 VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKG----------------  263 (320)
Q Consensus       200 ~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~----------------  263 (320)
                      .-|    ..|+....+..+-+=...+++-|+-.+.|.+.   |.+++++++.++|+..=|+|+-                
T Consensus       190 ~~g----t~aai~s~lf~asvyIilR~iGk~~h~~msvs---yf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvf  262 (346)
T KOG4510|consen  190 IPG----TVAAISSVLFGASVYIILRYIGKNAHAIMSVS---YFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVF  262 (346)
T ss_pred             CCc----hHHHHHhHhhhhhHHHHHHHhhccccEEEEeh---HHHHHHHHHHHHHHhhccceecCccccceEEEEEehhh
Confidence            222    22222222222333344577667777777664   6678889999999999888763                


Q ss_pred             -----------hhHhhcccCCcceeee-hhHHHHHHHHHHHHhh-------hhhhhhhhhhhhhh
Q 020855          264 -----------LSKEMNGYGEGRVSYL-MTLIWTAVTWQISSVG-------LLGLVFEPGLLDGA  309 (320)
Q Consensus       264 -----------i~~E~~~F~~G~~~Y~-~~lv~~av~WQ~~~~G-------~~Glif~~SsL~sg  309 (320)
                                 +++|    +-|+.+-- -+=|--|+.||+.+-|       .+|.+..+||-.--
T Consensus       263 gfigQIllTm~lQiE----rAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  263 GFIGQILLTMGLQIE----RAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             hhHHHHHHHHHhhhh----ccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence                       3333    23443321 1223458899998876       46777777775543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.47  E-value=0.0026  Score=53.30  Aligned_cols=125  Identities=19%  Similarity=0.165  Sum_probs=96.4

Q ss_pred             hHHhHHHHhHhC------CCCchhHHHHHHhhchhhHHHHhhhcccCCCCCC----CC--CCchhHHHHHHHHHHHHHHH
Q 020855           57 AATLLGRLYYDK------GGNSKWMATFVQSAGFPILLPILCCFSNGSRSAN----TT--DPKISTLVCLYVAFGLLLTG  124 (320)
Q Consensus        57 ~~~LL~r~Yf~~------gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~----~~--~p~~~~l~~~y~~lG~l~a~  124 (320)
                      .-..+.+.++.+      +.+..=+..+.+..++++++|+.++....+....    ..  .+..++....-+.-|++...
T Consensus        14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (153)
T PF03151_consen   14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFL   93 (153)
T ss_pred             HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHH
Confidence            334455555555      3344457788889999999998877644331111    11  01144667777777899999


Q ss_pred             hHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Q 020855          125 DNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL  181 (320)
Q Consensus       125 ~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~L  181 (320)
                      .|+..-.-..+..+.|++++...|-+.+.+++.++.++++|+.++.++++.++|..+
T Consensus        94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            999999999999999999999999999999999999999999999999999998765

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.46  E-value=0.0013  Score=54.73  Aligned_cols=65  Identities=11%  Similarity=0.114  Sum_probs=60.9

Q ss_pred             HHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          120 LLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       120 ~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      +.++...++++++++++|.|+...+-++..+++++.++++.+||+|+.++.++++..+|.++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            55778889999999999999999888899999999999999999999999999999999998874

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.32  E-value=0.0028  Score=60.22  Aligned_cols=120  Identities=18%  Similarity=0.168  Sum_probs=90.4

Q ss_pred             cchHHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhc
Q 020855           55 QSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLL  134 (320)
Q Consensus        55 ~~~~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~  134 (320)
                      .....+..|..    +-+.+-.++.|..|..+--..+++.+. +  .   +|..++.....+..|++++..|.+|..|..
T Consensus       164 y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~  233 (290)
T TIGR00776       164 YLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGHI-L--A---KPLKKYAILLNILPGLMWGIGNFFYLFSAQ  233 (290)
T ss_pred             HHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHHh-c--c---cchHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            34445555532    256677777777765554333333221 1  1   233444555566699999999999999999


Q ss_pred             -cCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHH----HHHHHHHHHHHHhhc
Q 020855          135 -YLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIF----NSLVLLTISATLLAV  184 (320)
Q Consensus       135 -yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~i----nsvVLLt~~a~LL~l  184 (320)
                       ++++++.+.+.+..-..+.++++++.+|++++.++    .+.++...|+.++++
T Consensus       234 ~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       234 PKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence             99999999999999999999999999999999999    999999999988765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.32  E-value=0.0078  Score=54.58  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=75.8

Q ss_pred             hHHhHHHHhHhCCCCch-hHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHH-HHHhHHHHHhhhc
Q 020855           57 AATLLGRLYYDKGGNSK-WMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLL-LTGDNMMYSYGLL  134 (320)
Q Consensus        57 ~~~LL~r~Yf~~gG~s~-Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l-~a~~N~lYa~gl~  134 (320)
                      ....+.|....+-+... .+..+....|.++++|.......+    ...   .++....-+.+|++ ......+|.++..
T Consensus       142 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (260)
T TIGR00950       142 LGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN----PQA---LSLQWGALLYLGLIGTALAYFLWNKGLT  214 (260)
T ss_pred             HHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC----CCc---chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555565554433323 333344455555555544432211    111   11222222333444 3456678889999


Q ss_pred             cCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Q 020855          135 YLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA  179 (320)
Q Consensus       135 yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a  179 (320)
                      ++|+++.+.+..++-.+++++++++.++|+++.++.+.++...|.
T Consensus       215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999988764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.27  E-value=0.013  Score=55.21  Aligned_cols=69  Identities=16%  Similarity=0.155  Sum_probs=60.6

Q ss_pred             HHHHH-HHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhcc
Q 020855          117 AFGLL-LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (320)
Q Consensus       117 ~lG~l-~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~  185 (320)
                      .+|+. ......+|.+++++.|+++.+++...|-.|++++++++.++++++.++.+.++...|..+....
T Consensus       213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            34555 3455668999999999999999999999999999999999999999999999999988887544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.25  E-value=0.01  Score=58.69  Aligned_cols=77  Identities=6%  Similarity=-0.016  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCC
Q 020855          111 LVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (320)
Q Consensus       111 l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~  189 (320)
                      +..+|.+++  .+..-++++++..+++++..++..-.+=+|++++++++.++++++.++.+.++...|..+...+...|
T Consensus       257 ~~i~y~~i~--t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        257 ITIVTMAII--TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            345565443  45566688899999999999999999999999999999999999999999999999988876554433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.05  E-value=0.012  Score=57.47  Aligned_cols=110  Identities=15%  Similarity=0.228  Sum_probs=83.6

Q ss_pred             CchhHHHHHHHHHHHH-HHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          106 PKISTLVCLYVAFGLL-LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       106 p~~~~l~~~y~~lG~l-~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      |..|+++..   +++. .+...+|| .|+.+..+|.|+.+--.-++|+++|+.-++++++++.+|.++.-...|.+.++.
T Consensus        83 pf~p~lfl~---Pal~Di~gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   83 PFNPVLFLP---PALCDIAGSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             CCCcceecC---hHHHHHhhhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            544555444   2222 34556778 999999999999999999999999999999999999999999999999888876


Q ss_pred             cCCC-CCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 020855          185 NADS-ENTSGVSKGNYVIGFLCTLGASATYSLYLSL  219 (320)
Q Consensus       185 ~~~s-~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L  219 (320)
                      .|-. +..+-...++-+.|..+.+.|-...+.-...
T Consensus       159 ~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  159 LDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             eecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            5421 1112222346799999999999988874333

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.05  E-value=0.017  Score=55.65  Aligned_cols=113  Identities=19%  Similarity=0.138  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHhhhccCchhhH-HHHHhhhhHHHHHHHHHHhccCCchHHH----HHHHHHHHHHHHhh
Q 020855          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTY-SLLCATQLAFNAFFSFFLNSQKFTPFIF----NSLVLLTISATLLA  183 (320)
Q Consensus       109 ~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~-sLi~sTQL~FTAiFs~~i~~qkft~~~i----nsvVLLt~~a~LL~  183 (320)
                      ++.+..++.-|+.|+.-+..--.++.++.+|.- =+-...||..|+++.+++.++--+..++    .|++++.+|+.+.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            488899999999999999888888888776643 3334899999999999999997775554    59999999999988


Q ss_pred             ccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 020855          184 VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQL  222 (320)
Q Consensus       184 l~~~s~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql  222 (320)
                      .++++++.+ +++++..-|....+.++..|.+|....+.
T Consensus       122 ~~~~~~~~~-~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  122 YQDKKSDKS-SSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             ccccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            776654422 23556677888999999999999888755

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.95  E-value=0.005  Score=60.33  Aligned_cols=195  Identities=16%  Similarity=0.200  Sum_probs=122.2

Q ss_pred             hHHHHHHHHHHHHhccchHHhHHHHhHhC--CCCchhHHHHHHhhchhhH-HHHhhhcccCCCCCCCCCCchhHHHHHHH
Q 020855           40 WWLRVILYVVCLLVGQSAATLLGRLYYDK--GGNSKWMATFVQSAGFPIL-LPILCCFSNGSRSANTTDPKISTLVCLYV  116 (320)
Q Consensus        40 ~w~lv~~~~~~ll~G~~~~~LL~r~Yf~~--gG~s~Wl~t~vQtaGfPll-l~pl~~~~~~~~~~~~~~p~~~~l~~~y~  116 (320)
                      +.....+++.+=.+.+ .+..+.+-|=-+  |++=+|.-|.++.+-=-+. +....+ ..+++++.+++...++++.   
T Consensus        14 ~~~~~~~~~~~w~~~~-v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~~~~~~~~~~~~~~llp---   88 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLS-VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVL-KLVPPSKISSKLPLRTLLP---   88 (316)
T ss_pred             hhHHHHHHHHHHhhhh-eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCCccccccchHHHHH---
Confidence            3444545555544444 444444444444  8888998888854432222 222222 2221111111112334444   


Q ss_pred             HHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 020855          117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSK  196 (320)
Q Consensus       117 ~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~  196 (320)
                       +|+..+....+=+.++.|.|||+++.+=++.-.||.++++++.++++++....+++..+.|.++-...         +.
T Consensus        89 -l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~---------e~  158 (316)
T KOG1441|consen   89 -LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT---------EL  158 (316)
T ss_pred             -HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec---------cc
Confidence             45555566677778999999999999999999999999999999999999999999888887774432         22


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccce-eEEehhHHHHHHHHHHHHHh
Q 020855          197 GNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETF-SVVLDMQIYSSFVATCGCVV  253 (320)
Q Consensus       197 ~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~-~~vlemQi~~slvAt~~~~v  253 (320)
                      +-...|+++++++-+.+.+-.-+.    +|..+++.. .-.|+.--+++-++.++.++
T Consensus       159 ~fn~~G~i~a~~s~~~~al~~I~~----~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~  212 (316)
T KOG1441|consen  159 SFNLFGFISAMISNLAFALRNILS----KKLLTSKGESLNSMNLLYYTAPISLIFLLI  212 (316)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHH----HHhhhccccccCchHHHHHhhhHHHHHHhc
Confidence            246999999999999999855555    444422111 11334444555555555554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.79  E-value=0.048  Score=54.16  Aligned_cols=109  Identities=11%  Similarity=0.154  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHhhhccCchh-hHHHHHhhhhHHHHHHHHHHhcc-------CCchHHHHHHHHHHHHHH
Q 020855          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPVS-TYSLLCATQLAFNAFFSFFLNSQ-------KFTPFIFNSLVLLTISAT  180 (320)
Q Consensus       109 ~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvs-T~sLi~sTQL~FTAiFs~~i~~q-------kft~~~insvVLLt~~a~  180 (320)
                      ++.....+.-|++++.-|..+-.+.+|+-+| +..+-..+||+++.++..++..+       +.-..-+.+++++++|.+
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            5777888899999999999999999999998 46677789999999999888542       222457889999999999


Q ss_pred             Hhhc----cCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 020855          181 LLAV----NADSENTSGVSKGNYVIGFLCTLGASATYSLYL  217 (320)
Q Consensus       181 LL~l----~~~s~~~~~~s~~~y~iGf~~tL~Asal~gL~l  217 (320)
                      +.+.    .|.+++.++.++++..-|....+.+..+|+.+.
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence            9987    544332222456788999999999999999987

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.75  E-value=0.034  Score=52.56  Aligned_cols=67  Identities=10%  Similarity=0.069  Sum_probs=60.9

Q ss_pred             HHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          118 FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       118 lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      .|+..+...++|.++++++|+++.+.+...+-.+++++++++.+|++|+.++.+.++..+|..+...
T Consensus       221 ~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        221 AAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            3455677889999999999999999999999999999999999999999999999999999877543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=96.72  E-value=0.0024  Score=59.71  Aligned_cols=113  Identities=22%  Similarity=0.384  Sum_probs=92.4

Q ss_pred             HHHHHHHH-HHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCC
Q 020855          110 TLVCLYVA-FGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS  188 (320)
Q Consensus       110 ~l~~~y~~-lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s  188 (320)
                      |++..|.. +-++|...||+|-.++..+.+|.-|-+.+-.-+|--+.+.+.++.||.-+.+.|+++-.-|.++++--   
T Consensus        50 k~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~---  126 (290)
T KOG4314|consen   50 KLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA---  126 (290)
T ss_pred             eeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec---
Confidence            44444432 35678899999999999999999999999999999999999999999999999999988888876632   


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccce
Q 020855          189 ENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETF  233 (320)
Q Consensus       189 ~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~  233 (320)
                          +++.+..++|..|+++.+...++    -...|+..+...+|
T Consensus       127 ----DN~~a~e~iGi~~AV~SA~~aAl----YKV~FK~~iGnAn~  163 (290)
T KOG4314|consen  127 ----DNEHADEIIGIACAVGSAFMAAL----YKVLFKMFIGNANF  163 (290)
T ss_pred             ----cchhhhhhhhHHHHHHHHHHHHH----HHHHHHHHhccCcc
Confidence                23455679999999999998888    45666887776653

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.53  E-value=0.027  Score=54.95  Aligned_cols=207  Identities=15%  Similarity=0.173  Sum_probs=148.6

Q ss_pred             ccchhHHHHHHHHHHHHhccchHHhHHHHhHhCCCCc--hhHHHHHHhhchhhHHHHhh-hcccCCCCCCCCCCchhHHH
Q 020855           36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNS--KWMATFVQSAGFPILLPILC-CFSNGSRSANTTDPKISTLV  112 (320)
Q Consensus        36 k~~~~w~lv~~~~~~ll~G~~~~~LL~r~Yf~~gG~s--~Wl~t~vQtaGfPlll~pl~-~~~~~~~~~~~~~p~~~~l~  112 (320)
                      .+..+|.--.+|+.-++.+-..---+..+-|+.-|=|  -|.-|++|-.=....-...+ .... ++   ..-|+.    
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~---r~iP~r----  107 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KR---RVIPWR----  107 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecc-cc---eecchh----
Confidence            3455688888888878877777777788878777766  79999999532211111111 1111 11   122332    


Q ss_pred             HHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCC
Q 020855          113 CLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS  192 (320)
Q Consensus       113 ~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~  192 (320)
                       .|..++.+.-..-=|-+-++.||..-|--+--.+|++=-.+-+.||-++|-...-..|-.++.+|-++-.+.|+...  
T Consensus       108 -tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s--  184 (367)
T KOG1582|consen  108 -TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS--  184 (367)
T ss_pred             -HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC--
Confidence             45555555544444555677788888888888899999999999999999999999999999999998887765443  


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCc
Q 020855          193 GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEW  261 (320)
Q Consensus       193 ~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~  261 (320)
                         .+-..+|..+.-+|=..=+++.-+-|-.+++ .+.+    .+||-+|.--++.++..++|..+||.
T Consensus       185 ---PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~-~~~s----s~EmvfySy~iG~vflf~~mvlTge~  245 (367)
T KOG1582|consen  185 ---PNFNLIGVMMISGALLADAVIGNVQEKAMKM-NPAS----SSEMVFYSYGIGFVFLFAPMVLTGEL  245 (367)
T ss_pred             ---CCcceeeHHHHHHHHHHHHHhhHHHHHHHhh-CCCC----cceEEEeeecccHHHHHHHHHhcccc
Confidence               3345789998888888888877777666664 2333    37999999899999999999999984

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=96.50  E-value=0.087  Score=49.62  Aligned_cols=64  Identities=11%  Similarity=0.114  Sum_probs=59.0

Q ss_pred             HHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhcc
Q 020855          122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (320)
Q Consensus       122 ~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~  185 (320)
                      .+...++|.++..++|+++.+++...+-++++++++++.+|++|+.++.+.++...|..++..+
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999999999999999999999999887543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.44  E-value=0.01  Score=57.32  Aligned_cols=70  Identities=24%  Similarity=0.305  Sum_probs=62.0

Q ss_pred             HHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCC
Q 020855          121 LLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSEN  190 (320)
Q Consensus       121 l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~  190 (320)
                      +++..+.+--.++.+.|.+.-+=+.+.++++|++++.+++++|+++..+.+.++..+|++++..+...++
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~  128 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEE  128 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCC
Confidence            4456667777899999999999999999999999999999999999999999999999998887664443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.32  E-value=0.1  Score=49.29  Aligned_cols=71  Identities=11%  Similarity=0.132  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhh
Q 020855          113 CLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA  183 (320)
Q Consensus       113 ~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~  183 (320)
                      ...+..|+..+.-.++|.++++++|+++-+++.-.+-.++.++++++.+|++|+.++.+.++..++..+..
T Consensus       214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34444555677788999999999999999999999999999999999999999999999999888777654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.30  E-value=0.041  Score=46.97  Aligned_cols=69  Identities=14%  Similarity=0.284  Sum_probs=59.3

Q ss_pred             HHHHHHhHHHHHhhhccCchhh-HHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          119 GLLLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       119 G~l~a~~N~lYa~gl~yLpvsT-~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      -+.++..=++.+.++.++|.++ |++....-.+.+++.+.++.+|++|..++..+.++.+|.+++.+.+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3445556688889999999986 66667889999999999999999999999999999999998876553

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.20  E-value=0.027  Score=52.63  Aligned_cols=67  Identities=16%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             HHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHh
Q 020855          116 VAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL  182 (320)
Q Consensus       116 ~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL  182 (320)
                      ...++..+..+.+|.++++++|+++.+.....+-.++.++++++.+||.|+.++.+.++..+|..++
T Consensus       215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            3344556678889999999999999999999999999999999999999999999999999988763

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=96.14  E-value=0.027  Score=52.98  Aligned_cols=63  Identities=11%  Similarity=-0.082  Sum_probs=57.2

Q ss_pred             HHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       122 ~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      +..-|.++.++..+++++|.++....+=.+++++++++.++++|+.++.+.++...|..+...
T Consensus       231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            445567777899999999999999999999999999999999999999999999999888664

specificities overlap.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.98  E-value=0.092  Score=51.16  Aligned_cols=116  Identities=13%  Similarity=0.120  Sum_probs=87.0

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       108 ~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      .||.+...+.-+++++.|=.+|-|+..+=-+---|+=|=-.=.++.+...+..|+|+++.|+.||++-++|+.....+.+
T Consensus        68 ~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          68 QPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            35888888999999999999999998874444445555555678999999999999999999999999999998877655


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ceeEEehhHH
Q 020855          188 SENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE-TFSVVLDMQI  241 (320)
Q Consensus       188 s~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~-t~~~vlemQi  241 (320)
                      +=.             +.+++=|..||+|.-+     ||..|-+ -..+.+|+-.
T Consensus       148 ~lp-------------wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l~  184 (293)
T COG2962         148 SLP-------------WVALALALSFGLYGLL-----RKKLKVDALTGLTLETLL  184 (293)
T ss_pred             CCc-------------HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHHH
Confidence            421             3455556667776543     6655543 4566777544

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.72  E-value=0.19  Score=49.44  Aligned_cols=124  Identities=16%  Similarity=0.256  Sum_probs=94.9

Q ss_pred             HHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCCCCcchHHHHHHH
Q 020855          127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCT  206 (320)
Q Consensus       127 ~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~s~~~y~iGf~~t  206 (320)
                      +-=..++.|+|+.+|+++=..-.+++|+-=..+.+.|++...+.|+++..+++...+..|.+.+         ..|..+.
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~---------~~gY~w~  162 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN---------LRGYSWA  162 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec---------chhHHHH
Confidence            3345788999999999999999999999999999999999999999999999988776665543         2277777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccch
Q 020855          207 LGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGL  264 (320)
Q Consensus       207 L~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i  264 (320)
                      +..++.-......+    ||.++.... -..||-.|=++.+.....+=-+.-|||+++
T Consensus       163 ~~n~~~~a~~~v~~----kk~vd~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l  215 (314)
T KOG1444|consen  163 LANCLTTAAFVVYV----KKSVDSANL-NKFGLVFYNNLLSLPPLLILSFITGELDAL  215 (314)
T ss_pred             HHHHHHHHHHHHHH----HHhhccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence            77777666644444    665554432 122455566777788888888899999843

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=95.65  E-value=0.092  Score=51.30  Aligned_cols=183  Identities=14%  Similarity=0.126  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHhHHHHHhhhc-cCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCC-
Q 020855          114 LYVAFGLLLTGDNMMYSYGLL-YLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENT-  191 (320)
Q Consensus       114 ~y~~lG~l~a~~N~lYa~gl~-yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~-  191 (320)
                      -|+..=++....|..=++++. +.|.--.-+.-+-.+.-|.+.+.+++++|-+..|+.|++++|+|.++-.+.++.|-. 
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            344444555555555555554 344444556667778889999999999999999999999999999987765544321 


Q ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCcc
Q 020855          192 ---------SGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWK  262 (320)
Q Consensus       192 ---------~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~  262 (320)
                               +..+.....+|+.+-..|..+++...---|..|||.-|...     |+-.|.-+...++-+    ..  .+
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~-----EalFytH~LsLP~Fl----f~--~~  214 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWK-----EALFYTHFLSLPLFL----FM--GD  214 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH-----HHHHHHHHhccchHH----Hh--cc
Confidence                     11233356788888888888888888888999999888776     888887655544332    12  23


Q ss_pred             chhHhhcccCCcc-----------eeeehhHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 020855          263 GLSKEMNGYGEGR-----------VSYLMTLIWTAVTWQISSVGLLGLVFEPGLLD  307 (320)
Q Consensus       263 ~i~~E~~~F~~G~-----------~~Y~~~lv~~av~WQ~~~~G~~Glif~~SsL~  307 (320)
                      +|..|.+...++|           .+-+.-|..+.++=-.|.=|+--|--++|||.
T Consensus       215 div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLT  270 (330)
T KOG1583|consen  215 DIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLT  270 (330)
T ss_pred             hHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceE
Confidence            4555555444444           12233344444444445555555555555553

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=95.45  E-value=0.59  Score=44.18  Aligned_cols=75  Identities=15%  Similarity=0.052  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccC
Q 020855          111 LVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (320)
Q Consensus       111 l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~  186 (320)
                      ...+|.++.. .+..-++|..+..++++++.+.+...+=.+++++++++.+|++|+.++.+.++...|..+...+.
T Consensus       215 ~~l~~l~i~~-t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        215 LSLMYLAFVA-TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3344443222 33455678899999999999999999999999999999999999999999999998887755444

>COG2510 Predicted membrane protein [Function unknown]

Probab=95.32  E-value=0.053  Score=47.47  Aligned_cols=112  Identities=17%  Similarity=0.168  Sum_probs=78.2

Q ss_pred             CCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhh
Q 020855           70 GNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQL  149 (320)
Q Consensus        70 G~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL  149 (320)
                      |..+=++|.+.+----+.+...++..-+.....+..   +|-..--+.-|+..++.-++|=++++.=++|--.=+..+..
T Consensus        28 ~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~---~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~sv  104 (140)
T COG2510          28 GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG---PKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSV  104 (140)
T ss_pred             ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccC---cceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccH
Confidence            344556666666443333333333332221111112   23333334457777888899989999888887777888999


Q ss_pred             HHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       150 ~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      +|+++|+.+.+++|.|.-++..++|.++|++++++
T Consensus       105 vl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510         105 VLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999998764

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.07  E-value=0.17  Score=42.48  Aligned_cols=65  Identities=17%  Similarity=0.112  Sum_probs=56.8

Q ss_pred             HHHHHHhHHHHHhhhccCchhh-HHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhh
Q 020855          119 GLLLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA  183 (320)
Q Consensus       119 G~l~a~~N~lYa~gl~yLpvsT-~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~  183 (320)
                      -+.++..-++.+.+++++|+++ |++-...-.+.+++.+.++.+|++|+.++.++.+...|.+++-
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3445556688889999999986 7888888999999999999999999999999999999988763

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.00  E-value=0.21  Score=41.63  Aligned_cols=64  Identities=19%  Similarity=0.218  Sum_probs=55.7

Q ss_pred             HHHHhHHHHHhhhccCchhh-HHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          121 LLTGDNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       121 l~a~~N~lYa~gl~yLpvsT-~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      .++..=++.+.+++++|.++ |++-...-.+.+++.++++.+||+|+.++..+.+..+|.+.+-+
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            34445577889999999986 78888899999999999999999999999999999999988754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=94.81  E-value=1.4  Score=39.68  Aligned_cols=74  Identities=20%  Similarity=0.315  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHH-HhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhcc
Q 020855          112 VCLYVAFGLLLT-GDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (320)
Q Consensus       112 ~~~y~~lG~l~a-~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~  185 (320)
                      ......+|++.. ..-+++.+++.+.|++..+.+..++..++.++++++.++++++.++.+..+.+.|..+...+
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            334444454444 46677779999999999999999999999999999999999999999998888888776554

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=94.80  E-value=0.31  Score=40.84  Aligned_cols=62  Identities=11%  Similarity=0.262  Sum_probs=53.6

Q ss_pred             hHHHHHhhhccCchhh-HHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccC
Q 020855          125 DNMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (320)
Q Consensus       125 ~N~lYa~gl~yLpvsT-~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~  186 (320)
                      .=++.+.++.++|.++ |.+-...-.+.+++.+.++.+|++|+.++..+.+..+|.+++.+.+
T Consensus        43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3366789999999986 5666778899999999999999999999999999999999986543

>TIGR00803 nst UDP-galactose transporter

Probab=94.50  E-value=0.083  Score=47.69  Aligned_cols=125  Identities=13%  Similarity=0.105  Sum_probs=83.3

Q ss_pred             HhccchHHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcc--cCCCCCCCCCCc---hhHHHHHHHHHHHHHHHhH
Q 020855           52 LVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFS--NGSRSANTTDPK---ISTLVCLYVAFGLLLTGDN  126 (320)
Q Consensus        52 l~G~~~~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~--~~~~~~~~~~p~---~~~l~~~y~~lG~l~a~~N  126 (320)
                      +.+++...=+...|.+++-+++=..-+.|...-|+..++..+..  .......+..+.   ++..   ...++++.+...
T Consensus        90 ~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~  166 (222)
T TIGR00803        90 VLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTA---VWIVGLLNVGGG  166 (222)
T ss_pred             HHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchH---HHHHHHHHHhcC
Confidence            33344445567788888744432446677777777766642211  111000011111   1222   233345566677


Q ss_pred             HHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Q 020855          127 MMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA  179 (320)
Q Consensus       127 ~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a  179 (320)
                      .+.++-+.|.+..+.+.+.++...++++.++++.++++|+.++.+..+...|.
T Consensus       167 ~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~  219 (222)
T TIGR00803       167 LCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLAT  219 (222)
T ss_pred             ceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeee
Confidence            77889999999999999999999999999999999999999999998876653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.31  E-value=0.38  Score=40.51  Aligned_cols=60  Identities=15%  Similarity=0.236  Sum_probs=54.3

Q ss_pred             HHHHHhhhccCchhh-HHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhcc
Q 020855          126 NMMYSYGLLYLPVST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (320)
Q Consensus       126 N~lYa~gl~yLpvsT-~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~  185 (320)
                      =++.+.++.++|+++ |.+-...-.+-|++.++++.+||+++.++.++.|+..|.+.+-+.
T Consensus        44 f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          44 FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            377889999999987 788889999999999999999999999999999999998887543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=94.08  E-value=0.95  Score=45.11  Aligned_cols=117  Identities=13%  Similarity=0.098  Sum_probs=75.7

Q ss_pred             CCCchhHHHHHHhhchh----hHHHHhhhcccCCCCC-----C--CCCCchhHHHHHHHHHHHHHHHhHHHHHhhhccCc
Q 020855           69 GGNSKWMATFVQSAGFP----ILLPILCCFSNGSRSA-----N--TTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLP  137 (320)
Q Consensus        69 gG~s~Wl~t~vQtaGfP----lll~pl~~~~~~~~~~-----~--~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~yLp  137 (320)
                      .|.+.|-..+.|..|-=    +.-+.++....+|.++     +  .++|...|-.+.++.-|++++.+|+.|.+|-..++
T Consensus       206 ~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g  285 (345)
T PRK13499        206 LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLG  285 (345)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            56777888888876322    2223333322111111     1  12333457778889999999999999999999996


Q ss_pred             hhhHH----HHHhhhhHHHHHHHHHHhccCCc------hHHHHHHHHHHHHHHHhhccC
Q 020855          138 VSTYS----LLCATQLAFNAFFSFFLNSQKFT------PFIFNSLVLLTISATLLAVNA  186 (320)
Q Consensus       138 vsT~s----Li~sTQL~FTAiFs~~i~~qkft------~~~insvVLLt~~a~LL~l~~  186 (320)
                      +++.-    +-.|+-..+..+=.. +.||+=+      +..+..++++.+|+++++++.
T Consensus       286 ~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        286 AQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             CccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            66443    333666566666666 4676655      778888888888888887653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=94.02  E-value=0.37  Score=41.31  Aligned_cols=66  Identities=14%  Similarity=0.141  Sum_probs=53.1

Q ss_pred             HHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHH--HhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          122 LTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFF--LNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       122 ~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~--i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      ++..-+++.+++..+|+|+..=+.+.--.+.++.++.  +.+|++|+.++.++++..+|..+++.++.
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            4444567778899999998776666655678888885  79999999999999999999999875443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.71  E-value=0.095  Score=51.26  Aligned_cols=160  Identities=19%  Similarity=0.274  Sum_probs=104.8

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       108 ~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      .+++.-..++.=.++..||+.    +.|.|++-|.+=-+.-+.||.+++|.++|||=+..-..+-.+..+| .-+|++++
T Consensus       102 ~r~vlplsvVfi~mI~fnnlc----L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~G-F~lGvdqE  176 (347)
T KOG1442|consen  102 ARQVLPLSVVFILMISFNNLC----LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILG-FGLGVDQE  176 (347)
T ss_pred             HHhhcchhheeeeehhcccee----hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheeh-heeccccc
Confidence            356666777777888899965    6889999999888999999999999999999776654433332222 22233332


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCccchhHh
Q 020855          188 SENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWKGLSKE  267 (320)
Q Consensus       188 s~~~~~~s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~~i~~E  267 (320)
                      +.     ++.--.+|.+.-..||..-++    --++=+|++... -.-.-+...|.+..|.+..+--+..+||++++.  
T Consensus       177 ~~-----~~~ls~~GvifGVlaSl~vAl----naiytkk~l~~v-~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~--  244 (347)
T KOG1442|consen  177 GS-----TGTLSWIGVIFGVLASLAVAL----NAIYTKKVLPPV-GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVV--  244 (347)
T ss_pred             cc-----cCccchhhhHHHHHHHHHHHH----HHHhhheecccc-cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHc--
Confidence            21     122235666666666554444    333334544332 222345778889999999999999999998865  


Q ss_pred             hcccCCcceeeehhHHHHHHHHHHHHhh
Q 020855          268 MNGYGEGRVSYLMTLIWTAVTWQISSVG  295 (320)
Q Consensus       268 ~~~F~~G~~~Y~~~lv~~av~WQ~~~~G  295 (320)
                        +|.+         .|+.=-||+..+|
T Consensus       245 --~~~~---------l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  245 --GFPH---------LPAIKFWILMTLS  261 (347)
T ss_pred             --Cccc---------chHHHHHHHHHHH
Confidence              4422         3455567766654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=92.25  E-value=1.1  Score=44.38  Aligned_cols=145  Identities=16%  Similarity=0.089  Sum_probs=100.3

Q ss_pred             cchhHHHHHHHHHHHHhccchHHhHHHHhHhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHH
Q 020855           37 HYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYV  116 (320)
Q Consensus        37 ~~~~w~lv~~~~~~ll~G~~~~~LL~r~Yf~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~  116 (320)
                      +....+++++..++-.+    +..+... +.++-++.=+..++..-|+.+..|...+..++.-   +.-++..+.....+
T Consensus       166 ~i~GDll~l~~a~lya~----~nV~~E~-~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i---~~~~w~~~~~~~~v  237 (334)
T PF06027_consen  166 PILGDLLALLGAILYAV----SNVLEEK-LVKKAPRVEFLGMLGLFGFIISGIQLAILERSGI---ESIHWTSQVIGLLV  237 (334)
T ss_pred             cchhHHHHHHHHHHHHH----HHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHHheehhhh---hccCCChhhHHHHH
Confidence            34445555555544433    3344554 4445555556688999999998887776543321   11223344555555


Q ss_pred             HHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCC
Q 020855          117 AFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (320)
Q Consensus       117 ~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~  189 (320)
                      +.++.......+-.+.+.+-++..+++=..|--.++.++..++-++|+++..+.|.++..+|-++....+..+
T Consensus       238 ~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  238 GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            5555555666666778888888888888888889999999999999999999999999999999887766443

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=91.43  E-value=1.4  Score=42.90  Aligned_cols=74  Identities=15%  Similarity=0.183  Sum_probs=65.7

Q ss_pred             hhHHHHHHHHHHHHHHHhHH-HHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Q 020855          108 ISTLVCLYVAFGLLLTGDNM-MYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL  181 (320)
Q Consensus       108 ~~~l~~~y~~lG~l~a~~N~-lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~L  181 (320)
                      .|.++.+....|++..+--| +=..++..+|.+||+++.+.+=++.|+-..+++.|..|+.||.++++...+++=
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            57888999999998877655 335789999999999999999999999999999999999999999998887763

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=91.28  E-value=4.6  Score=39.57  Aligned_cols=64  Identities=13%  Similarity=0.079  Sum_probs=56.4

Q ss_pred             HHHHHhHHHHH----hhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhh
Q 020855          120 LLLTGDNMMYS----YGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA  183 (320)
Q Consensus       120 ~l~a~~N~lYa----~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~  183 (320)
                      +..+.-.++|+    +++.++++.|+++.+..|=.++.++++++.++++|+.++.+.++...|..+.+
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            33455566666    59999999999999999999999999999999999999999999999988764

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=91.23  E-value=0.054  Score=52.51  Aligned_cols=170  Identities=14%  Similarity=0.199  Sum_probs=113.0

Q ss_pred             CCchhHHHHHHhhchhhHHHHhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhh
Q 020855           70 GNSKWMATFVQSAGFPILLPILCCFSNGSRSANTTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQL  149 (320)
Q Consensus        70 G~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~~~~~p~~~~l~~~y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL  149 (320)
                      =|-+=.+|++.=+---+..-|+..+++         +..+-..-=|+.+|+.=.-.||.-.-+++|..-.+-+++-.--.
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~---------~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwai  115 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFRR---------KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAI  115 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhhh---------HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhh
Confidence            445667777766655555555554432         11111112288888888888999889999999988888888888


Q ss_pred             HHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC--CCCCCCCCCcchHHHHHHHHHHH-----------------
Q 020855          150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD--SENTSGVSKGNYVIGFLCTLGAS-----------------  210 (320)
Q Consensus       150 ~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~--s~~~~~~s~~~y~iGf~~tL~As-----------------  210 (320)
                      .--.+.++++++-|-...++.+|+.+..|.+++.+.|-  +|+.   ...+...|....++++                 
T Consensus       116 p~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~a---ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~  192 (336)
T KOG2766|consen  116 PCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRA---GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA  192 (336)
T ss_pred             HHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccccc---CCCCCccCcEEEEecceeeeeccccHHHHHhcC
Confidence            88899999999999999999999999999988765431  2221   1112233333333322                 


Q ss_pred             ---------HHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHH
Q 020855          211 ---------ATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCV  252 (320)
Q Consensus       211 ---------al~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~  252 (320)
                               -+||-+.+.+|..+++ .+..+.+..-+|-.+..+.-+.||+
T Consensus       193 d~~elm~~lgLfGaIIsaIQ~i~~~-~~~~tl~w~~~i~~yl~f~L~MFll  242 (336)
T KOG2766|consen  193 DRVELMGFLGLFGAIISAIQFIFER-HHVSTLHWDSAIFLYLRFALTMFLL  242 (336)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhc-cceeeEeehHHHHHHHHHHHHHHHH
Confidence                     4677777778888876 3444444444577776666666664

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=90.45  E-value=1  Score=36.10  Aligned_cols=55  Identities=13%  Similarity=0.094  Sum_probs=33.4

Q ss_pred             HHHHhHHHHHhhhccCchhhH-HHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHH
Q 020855          121 LLTGDNMMYSYGLLYLPVSTY-SLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLL  175 (320)
Q Consensus       121 l~a~~N~lYa~gl~yLpvsT~-sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLL  175 (320)
                      .++..-++++.+++++|.++- .+....-.+.+++.+.++.+|++|+.++.++.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            456666999999999999975 6677788999999999999999999999988763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.20  E-value=4  Score=40.84  Aligned_cols=164  Identities=16%  Similarity=0.233  Sum_probs=103.4

Q ss_pred             HHHHHHHHHhccchHHhHHHHh--HhCCCCchhHHHHHHhhchhhHHHHhhhcccCCCCC-C--CCCCchhHHHHHHHHH
Q 020855           44 VILYVVCLLVGQSAATLLGRLY--YDKGGNSKWMATFVQSAGFPILLPILCCFSNGSRSA-N--TTDPKISTLVCLYVAF  118 (320)
Q Consensus        44 v~~~~~~ll~G~~~~~LL~r~Y--f~~gG~s~Wl~t~vQtaGfPlll~pl~~~~~~~~~~-~--~~~p~~~~l~~~y~~l  118 (320)
                      +++-+++-.+|..++   +-+|  |+|=-+=+|=+.|+--.=|.-++.|+......-+.- +  +..|  ...+...+..
T Consensus         5 ii~Gii~h~iGg~~~---~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~--~~~l~~~~l~   79 (344)
T PF06379_consen    5 IILGIIFHAIGGFAS---GSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATP--ASTLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHHh---hhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCC--hhHHHHHHHH
Confidence            344455545543222   2233  333334478888888777888888876654322110 0  2222  1345556778


Q ss_pred             HHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHH---hc--------cCCchHHHHHHHHHHHHHHHhhcc--
Q 020855          119 GLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFL---NS--------QKFTPFIFNSLVLLTISATLLAVN--  185 (320)
Q Consensus       119 G~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i---~~--------qkft~~~insvVLLt~~a~LL~l~--  185 (320)
                      |++|+.-+..|..+..||-+|   |-.+--+..+++|..++   ..        ++-....+..+++..+|.++.+.-  
T Consensus        80 G~lWGIGgltfGl~mryLGvS---LG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVS---LGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHH---HHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            999999999999999999984   44455566666665544   12        223457888888888888887742  


Q ss_pred             -CCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 020855          186 -ADSENTSGVSKGNYVIGFLCTLGASATYSL  215 (320)
Q Consensus       186 -~~s~~~~~~s~~~y~iGf~~tL~Asal~gL  215 (320)
                       .+.|.+++.++.+...|...++.+.++++.
T Consensus       157 ~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~  187 (344)
T PF06379_consen  157 MKEKELGEEAKEFNFKKGLIIAVLSGVMSAC  187 (344)
T ss_pred             hhhhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence             223334456677888999998887776665

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=89.40  E-value=5.3  Score=37.92  Aligned_cols=59  Identities=12%  Similarity=0.255  Sum_probs=50.4

Q ss_pred             hHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhc
Q 020855          125 DNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (320)
Q Consensus       125 ~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l  184 (320)
                      ++..+ +-...-.+.|.+++..+.-++|.+++.++.++++|+.+|.++++...|..+-..
T Consensus       239 ~~~i~-~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  239 QFFIF-YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHH-HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            44555 346778888999999999999999999999999999999999998888877544

; GO: 0055085 transmembrane transport

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.02  E-value=9.2  Score=38.00  Aligned_cols=143  Identities=15%  Similarity=0.167  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHhHHHHHhhhccCchhhHHHHHhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 020855          115 YVAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV  194 (320)
Q Consensus       115 y~~lG~l~a~~N~lYa~gl~yLpvsT~sLi~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~s~~~~~~  194 (320)
                      |..+++.-.....+==-++.|++.-|..|-=+.|++=..+-..++-|+|.+...-....|.+.|+.+-.+.+.+|.+.+.
T Consensus        86 y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~  165 (327)
T KOG1581|consen   86 YSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKS  165 (327)
T ss_pred             HhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcccc
Confidence            44444444444444337899999999999999999999999999999999999999999999999988887766644444


Q ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeEEehhHHHHHHHHHHHHHhHhhccCCcc
Q 020855          195 SKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVLDMQIYSSFVATCGCVVGLFASGEWK  262 (320)
Q Consensus       195 s~~~y~iGf~~tL~Asal~gL~l~L~ql~feKv~k~~t~~~vlemQi~~slvAt~~~~vGl~~sgd~~  262 (320)
                      -+.+-.+|+.+-.+-=+.=|+...--    +|+.|+.. .--..|-.++.+..++.+.+++.-.|.+.
T Consensus       166 g~~ns~~G~~Ll~~~L~fDgfTn~tQ----d~lf~~~k-~s~~~mM~~vNLf~~i~~~~~li~qg~~~  228 (327)
T KOG1581|consen  166 GRENSPIGILLLFGYLLFDGFTNATQ----DSLFKKYK-VSSLHMMFGVNLFSAILNGTYLILQGHLL  228 (327)
T ss_pred             CCCCchHhHHHHHHHHHHHhhHHhHH----HHHhccCC-ccHhHHHHHHHHHHHHHHHHhhhcCCCCc
Confidence            44466888887666555556633333    44444221 11346888889999999999988888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.34
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.19

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.34  E-value=0.0011  Score=53.56  Aligned_cols=67  Identities=9%  Similarity=0.187  Sum_probs=60.2

Q ss_pred             HHHHHhHHHHHhhhccCchhhHHHH-HhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccC
Q 020855          120 LLLTGDNMMYSYGLLYLPVSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (320)
Q Consensus       120 ~l~a~~N~lYa~gl~yLpvsT~sLi-~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~  186 (320)
                      +.++..-++++++++++|.|+..-+ ..+..+++++.++++.+||+|+.++.++++...|..++...+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3456667899999999999998777 899999999999999999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.19  E-value=0.00058  Score=57.90  Aligned_cols=68  Identities=9%  Similarity=0.183  Sum_probs=48.4

Q ss_pred             HHHHHhHHHHHhhhccCchhhHHHH-HhhhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhccCC
Q 020855          120 LLLTGDNMMYSYGLLYLPVSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (320)
Q Consensus       120 ~l~a~~N~lYa~gl~yLpvsT~sLi-~sTQL~FTAiFs~~i~~qkft~~~insvVLLt~~a~LL~l~~~  187 (320)
                      +.++..-+++++++.++|+++..-+ ....-++++++++++.++++|+.++.++.+..+|..++...+.
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            3455666899999999999977666 8999999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00