Citrus Sinensis ID: 020868


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
METLNFPHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEANAKRRESCSGSS
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccccccHHHHHHHccccccccc
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccHHHHHHHHHHHHHcHHHHHHHHHHcccccccc
metlnfphetqVFKSAAVSRLLLLALIVLWRAllspydtsaplnpnclvdphqqqhspnssigsriessivwdSVYFVRIAQCgyeyeqsyaflpllpAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLfcfnpasifytsiYSESLYALFSVGGLYYLMSGALNISVLWLAISGcarsngvlnagYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNmclgrspdemrpwckakvpLLYNFIQSHYWYSKFEAEEANAkrrescsgss
metlnfphetqVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEAnakrrescsgss
METLNFPHETQVFKsaavsrllllalivlwrallSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEANAKRRESCSGSS
**********QVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCL*****************IESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKF*****************
***********VFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEANAK*********
********ETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDP*************RIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEA***************
**TLNFPHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEANA**********
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METLNFPHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEEANAKRRESCSGSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q5KR61 492 GPI mannosyltransferase 2 yes no 0.884 0.575 0.271 3e-25
Q9NUD9 493 GPI mannosyltransferase 2 yes no 0.896 0.582 0.277 3e-25
Q7TPN3 493 GPI mannosyltransferase 2 yes no 0.868 0.563 0.276 1e-24
Q2GSI6 471 GPI mannosyltransferase 2 N/A no 0.865 0.588 0.267 1e-18
P0CP63 423 GPI mannosyltransferase 2 N/A no 0.7 0.529 0.309 3e-18
P0CP62 423 GPI mannosyltransferase 2 yes no 0.7 0.529 0.309 3e-18
Q9V7W1 449 GPI mannosyltransferase 2 yes no 0.678 0.483 0.276 2e-16
Q4I0K3 423 GPI mannosyltransferase 2 yes no 0.681 0.515 0.300 4e-16
Q290J8 452 GPI mannosyltransferase 2 yes no 0.662 0.469 0.283 2e-15
Q6C216357 GPI mannosyltransferase 2 yes no 0.709 0.635 0.288 9e-15
>sp|Q5KR61|PIGV_RAT GPI mannosyltransferase 2 OS=Rattus norvegicus GN=Pigv PE=2 SV=1 Back     alignment and function desciption
 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 34/317 (10%)

Query: 7   PHETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRI 66
           P + +V K A   R+L L L  L+  ++  +   A   P           +P+ S+   +
Sbjct: 6   PSQKEVLKFAVSCRILTLVLQALFNIIIPDHHADAFSPPRL---------APSGSVDQLV 56

Query: 67  ESSI----VWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVL 122
           E+ +     WD+ +F+ IA+ GY YE ++AF P  P    L+   +L PL G++  R+ L
Sbjct: 57  EALLGGLSRWDAEHFLFIAEHGYLYEHNFAFFPGFP-LALLMGTELLRPLQGLLSERSCL 115

Query: 123 GLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYAL 182
            ++  +++++  + AAV  + L  ++L  P  A CA+LLFC +PA++F  + YSE+L+A 
Sbjct: 116 LVSVALLNSLFSVLAAVALHDLGCLVLHCPRQAFCAALLFCLSPANVFLAAGYSEALFAF 175

Query: 183 FSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAM 242
            +   +  L  G    S L  A++   RSNG+++ G+           +L +       +
Sbjct: 176 LTFSAMGQLERGRGWASGLLFALAAGVRSNGLVSVGFLLHSQCRGFCSSLVVLDPLKGLV 235

Query: 243 WILVCGALRCICIFAPFISFQVYGYFNMCLGRSP--------------------DEMRPW 282
            ++    L  + +  PF  FQ Y Y   C   S                     D   PW
Sbjct: 236 KLMASLCLSVLTVSLPFALFQYYAYTQFCFPGSAHAIPEPLLRLASDRGYRLAGDYEPPW 295

Query: 283 CKAKVPLLYNFIQSHYW 299
           C    PL+Y++IQ  YW
Sbjct: 296 CSRAPPLIYSYIQDVYW 312




Alpha-1,6-mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the second mannose to the glycosylphosphatidylinositol during GPI precursor assembly.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9NUD9|PIGV_HUMAN GPI mannosyltransferase 2 OS=Homo sapiens GN=PIGV PE=1 SV=1 Back     alignment and function description
>sp|Q7TPN3|PIGV_MOUSE GPI mannosyltransferase 2 OS=Mus musculus GN=Pigv PE=2 SV=2 Back     alignment and function description
>sp|Q2GSI6|GPI18_CHAGB GPI mannosyltransferase 2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=GPI18 PE=3 SV=1 Back     alignment and function description
>sp|P0CP63|GPI18_CRYNB GPI mannosyltransferase 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=GPI18 PE=3 SV=1 Back     alignment and function description
>sp|P0CP62|GPI18_CRYNJ GPI mannosyltransferase 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=GPI18 PE=3 SV=1 Back     alignment and function description
>sp|Q9V7W1|PIGV_DROME GPI mannosyltransferase 2 OS=Drosophila melanogaster GN=veg PE=2 SV=1 Back     alignment and function description
>sp|Q4I0K3|GPI18_GIBZE GPI mannosyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GPI18 PE=3 SV=1 Back     alignment and function description
>sp|Q290J8|PIGV_DROPS GPI mannosyltransferase 2 OS=Drosophila pseudoobscura pseudoobscura GN=veg PE=3 SV=1 Back     alignment and function description
>sp|Q6C216|GPI18_YARLI GPI mannosyltransferase 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPI18 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
225435692 497 PREDICTED: GPI mannosyltransferase 2 [Vi 0.934 0.601 0.673 1e-116
255573720 500 conserved hypothetical protein [Ricinus 0.928 0.594 0.677 1e-115
224073180 483 predicted protein [Populus trichocarpa] 0.931 0.616 0.720 1e-114
449462575 496 PREDICTED: GPI mannosyltransferase 2-lik 0.943 0.608 0.669 1e-113
400131568 548 T4.7 [Malus x robusta] 0.912 0.532 0.687 1e-110
297849556 494 hypothetical protein ARALYDRAFT_471336 [ 0.906 0.587 0.64 1e-110
42561929 489 phosphatidylinositol glycan, class V [Ar 0.903 0.591 0.632 1e-108
3157950 492 Contains similarity to hypothetical prot 0.896 0.583 0.623 1e-105
356519786 488 PREDICTED: GPI mannosyltransferase 2-lik 0.893 0.586 0.623 3e-98
357475203 486 GPI mannosyltransferase [Medicago trunca 0.868 0.572 0.616 8e-96
>gi|225435692|ref|XP_002283435.1| PREDICTED: GPI mannosyltransferase 2 [Vitis vinifera] gi|297746434|emb|CBI16490.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/303 (67%), Positives = 249/303 (82%), Gaps = 4/303 (1%)

Query: 1   METLNFP---HETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHS 57
           M T NF    H   + K+A  SRL LLALI+ WR+L  PYDTSAPLNPNCL    Q   +
Sbjct: 1   MNTSNFQKSNHICIILKTAVCSRLFLLALIIFWRSLFEPYDTSAPLNPNCLSLESQPADT 60

Query: 58  PN-SSIGSRIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVI 116
                IG+ IE SIVWD+VYFVRIAQCGYEYEQSYAFLPLLP     LSR+V APLI +I
Sbjct: 61  VLWPKIGAAIEGSIVWDAVYFVRIAQCGYEYEQSYAFLPLLPICISFLSRTVFAPLIPLI 120

Query: 117 GYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYS 176
           G+RAVLGL+GY+++N+AF+ AAVYFY+LSV+ILKD +AA  AS+LFCFNPASIFY+SIYS
Sbjct: 121 GHRAVLGLSGYVLNNIAFVLAAVYFYKLSVIILKDKEAAFRASILFCFNPASIFYSSIYS 180

Query: 177 ESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKK 236
           ESLYAL SVGG+Y+L+S + N++VLWLA+SG ARSNGVLNAGYFCFQTMH+AY+A+FLKK
Sbjct: 181 ESLYALLSVGGVYHLISSSNNVAVLWLALSGSARSNGVLNAGYFCFQTMHEAYEAIFLKK 240

Query: 237 RHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQS 296
           R +L++ +L+ G LRC+CIF PF++FQ YGY+N+CLG  PDEM PWCKA+VPL+YN++QS
Sbjct: 241 RAYLSVQVLLVGVLRCLCIFVPFVAFQAYGYYNICLGHFPDEMSPWCKARVPLVYNYLQS 300

Query: 297 HYW 299
           HYW
Sbjct: 301 HYW 303




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573720|ref|XP_002527781.1| conserved hypothetical protein [Ricinus communis] gi|223532816|gb|EEF34591.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224073180|ref|XP_002304011.1| predicted protein [Populus trichocarpa] gi|222841443|gb|EEE78990.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449462575|ref|XP_004149016.1| PREDICTED: GPI mannosyltransferase 2-like [Cucumis sativus] gi|449502191|ref|XP_004161569.1| PREDICTED: GPI mannosyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|400131568|emb|CCH50968.1| T4.7 [Malus x robusta] Back     alignment and taxonomy information
>gi|297849556|ref|XP_002892659.1| hypothetical protein ARALYDRAFT_471336 [Arabidopsis lyrata subsp. lyrata] gi|297338501|gb|EFH68918.1| hypothetical protein ARALYDRAFT_471336 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42561929|ref|NP_172652.2| phosphatidylinositol glycan, class V [Arabidopsis thaliana] gi|46931244|gb|AAT06426.1| At1g11880 [Arabidopsis thaliana] gi|50897228|gb|AAT85753.1| At1g11880 [Arabidopsis thaliana] gi|332190687|gb|AEE28808.1| phosphatidylinositol glycan, class V [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3157950|gb|AAC17633.1| Contains similarity to hypothetical protein C18b11.05 gb|Z50728 from S. pombe. EST gb|H76601 comes from this gene [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356519786|ref|XP_003528550.1| PREDICTED: GPI mannosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|357475203|ref|XP_003607887.1| GPI mannosyltransferase [Medicago truncatula] gi|85719351|gb|ABC75356.1| Protein of unknown function DUF409 [Medicago truncatula] gi|355508942|gb|AES90084.1| GPI mannosyltransferase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
TAIR|locus:2008970 489 AT1G11880 [Arabidopsis thalian 0.818 0.535 0.647 7.4e-98
DICTYBASE|DDB_G0280891 626 pigV "phosphatidylinositol gly 0.575 0.293 0.312 1.2e-28
UNIPROTKB|F1PQ81 412 PIGV "Uncharacterized protein" 0.681 0.529 0.301 1.9e-28
UNIPROTKB|Q9NUD9 493 PIGV "GPI mannosyltransferase 0.643 0.417 0.309 2.7e-28
UNIPROTKB|H9KYS4 512 PIGV "Uncharacterized protein" 0.615 0.384 0.311 3.5e-28
UNIPROTKB|F1STS1 493 LOC100624784 "Uncharacterized 0.662 0.430 0.298 3.5e-28
UNIPROTKB|I3LJM4 494 LOC100624784 "Uncharacterized 0.662 0.429 0.298 3.5e-28
MGI|MGI:2442480 493 Pigv "phosphatidylinositol gly 0.643 0.417 0.317 6e-28
UNIPROTKB|J9P6Y3 470 PIGV "Uncharacterized protein" 0.681 0.463 0.301 7.2e-28
UNIPROTKB|J9NWG9 493 PIGV "Uncharacterized protein" 0.681 0.442 0.301 1e-27
TAIR|locus:2008970 AT1G11880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 173/267 (64%), Positives = 222/267 (83%)

Query:    36 PYDTSAPLNPNCLVDPHQQQHSPN--SSIGSR-IESSIVWDSVYFVRIAQCGYEYEQSYA 92
             PYDTSA LNP CL   H++   P   ++  SR +E+S+VWDSVYF+RI +CGYEYEQ+YA
Sbjct:    41 PYDTSAALNPPCLY--HKEDSFPFLVANAASRSLENSVVWDSVYFLRITECGYEYEQTYA 98

Query:    93 FLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDP 152
             FLPLLP F  LLSR+V APL+ +IG RAV+ L+G+ VSN+AF+FAA+Y +R+SV+ILKD 
Sbjct:    99 FLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILKDT 158

Query:   153 DAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSN 212
             +A+  AS++FCFNPASIFY+SIYSESLYALFS+GG+Y+L+SG  N+ VLW A+SGCARSN
Sbjct:   159 EASFRASIIFCFNPASIFYSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSN 218

Query:   213 GVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCL 272
             G+LNAGY CFQTMH+AY+AL+ K+R +LAM + + G LRCICI  PF++FQ YGY+N+C 
Sbjct:   219 GILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFLRCICICLPFVAFQAYGYYNICH 278

Query:   273 GRSPDEMRPWCKAKVPLLYNFIQSHYW 299
             G + DE+RPWCK ++PLLYNFIQSHYW
Sbjct:   279 GHTRDEVRPWCKGRIPLLYNFIQSHYW 305




GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0006506 "GPI anchor biosynthetic process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA
DICTYBASE|DDB_G0280891 pigV "phosphatidylinositol glycan, class V" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1PQ81 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NUD9 PIGV "GPI mannosyltransferase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KYS4 PIGV "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1STS1 LOC100624784 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LJM4 LOC100624784 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2442480 Pigv "phosphatidylinositol glycan anchor biosynthesis, class V" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9P6Y3 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9NWG9 PIGV "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
pfam04188 412 pfam04188, Mannosyl_trans2, Mannosyltransferase (P 4e-87
COG5542 420 COG5542, COG5542, Predicted integral membrane prot 5e-18
>gnl|CDD|217951 pfam04188, Mannosyl_trans2, Mannosyltransferase (PIG-V)) Back     alignment and domain information
 Score =  267 bits (683), Expect = 4e-87
 Identities = 109/289 (37%), Positives = 155/289 (53%), Gaps = 8/289 (2%)

Query: 11  QVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSI 70
           ++   A + R L L L +L      P  TS  LNP C   P       N  + +     +
Sbjct: 4   ELTLYAVLCRSLQLLLTILTPIRQFPTSTSLALNPPCSNSPSLVNSYWNRYLWN---KLL 60

Query: 71  VWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVS 130
            WDSVYF++IA+ GY +E  YAF PL P F  LL +S   PL+ ++G R+ +  + + +S
Sbjct: 61  SWDSVYFLKIAENGYLFEHEYAFSPLWPFFISLLIKSNNDPLVHLLGLRSCIENSLFYLS 120

Query: 131 NVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSIYSESLYALFSVGGLYY 190
            + F  AA    +L   IL     +   SLLFC +PA+IF +SIYSESL+ALFS  G++ 
Sbjct: 121 ILFFFLAAKALSQLIRQILFARTISFYTSLLFCLSPAAIFLSSIYSESLFALFSFVGIWS 180

Query: 191 LMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGAL 250
           L  G     VLW A+S   RSNG+ + G+     +   + +L    ++   +  +    L
Sbjct: 181 LECGIDISWVLWFALSTIMRSNGLASLGFSNCVLLGIYFISLIELTKNRKFVKAICFPFL 240

Query: 251 RCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYW 299
            C  IF PF+ FQ YGY   C GR      PWCK+++PLLY++IQSHYW
Sbjct: 241 SCSLIFLPFLYFQYYGYKTFCPGRG-----PWCKSQLPLLYSYIQSHYW 284


This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI. Length = 412

>gnl|CDD|227829 COG5542, COG5542, Predicted integral membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
PF04188 443 Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int 100.0
KOG2647 444 consensus Predicted Dolichyl-phosphate-mannose-pro 100.0
COG5542 420 Predicted integral membrane protein [Function unkn 99.94
PF13231159 PMT_2: Dolichyl-phosphate-mannose-protein mannosyl 99.05
TIGR03766 483 conserved hypothetical integral membrane protein. 98.8
PF02366245 PMT: Dolichyl-phosphate-mannose-protein mannosyltr 98.58
TIGR03663 439 conserved hypothetical protein TIGR03663. Members 98.22
COG1807 535 ArnT 4-amino-4-deoxy-L-arabinose transferase and r 98.04
PRK13279 552 arnT 4-amino-4-deoxy-L-arabinose transferase; Prov 97.76
PF09594241 DUF2029: Protein of unknown function (DUF2029); In 97.46
PLN02841 440 GPI mannosyltransferase 97.44
PF09852 449 DUF2079: Predicted membrane protein (DUF2079); Int 97.36
COG1287 773 Uncharacterized membrane protein, required for N-l 96.94
PF02516 483 STT3: Oligosaccharyl transferase STT3 subunit; Int 96.93
PF03901 418 Glyco_transf_22: Alg9-like mannosyltransferase fam 96.89
PF06728382 PIG-U: GPI transamidase subunit PIG-U; InterPro: I 96.86
TIGR03459 470 crt_membr carotene biosynthesis associated membran 96.57
KOG3359 723 consensus Dolichyl-phosphate-mannose:protein O-man 96.49
PF10131 616 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase 96.43
PF11028178 DUF2723: Protein of unknown function (DUF2723); In 96.4
COG1928 699 PMT1 Dolichyl-phosphate-mannose--protein O-mannosy 96.39
PLN02816 546 mannosyltransferase 96.35
PF04922 379 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 95.44
KOG3893 405 consensus Mannosyltransferase [Carbohydrate transp 95.24
COG4346438 Predicted membrane-bound dolichyl-phosphate-mannos 94.95
COG5305 552 Predicted membrane protein [Function unknown] 94.71
COG3463 458 Predicted membrane protein [Function unknown] 94.38
PF03155 469 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; 93.11
PF05208 368 ALG3: ALG3 protein; InterPro: IPR007873 The format 90.54
KOG2762 429 consensus Mannosyltransferase [Carbohydrate transp 89.42
PF05007 259 Mannosyl_trans: Mannosyltransferase (PIG-M); Inter 88.81
KOG2576 500 consensus Glucosyltransferase - Alg8p [Transcripti 86.73
COG5650 536 Predicted integral membrane protein [Function unkn 81.99
PF09586 843 YfhO: Bacterial membrane protein YfhO; InterPro: I 81.46
PF14897330 EpsG: EpsG family 81.14
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface Back     alignment and domain information
Probab=100.00  E-value=4.6e-65  Score=505.88  Aligned_cols=295  Identities=41%  Similarity=0.697  Sum_probs=252.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcCCCccc
Q 020868           10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ   89 (320)
Q Consensus        10 ~~vl~~~l~sR~~~~~i~~l~~~~~p~~dts~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~WDa~~f~~IA~~GY~~e~   89 (320)
                      ++|++.++.+|+++++++++++...-|+|++..+.++..+++.   ...+....+.++++.|||++||++||+|||++||
T Consensus         2 ~~~~~~~~~~r~l~lll~~l~~~~~~~~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~l~rWDa~~F~~IA~~GY~~E~   78 (443)
T PF04188_consen    2 KGVVKFFVLSRILQLLLQILFPGLLFDTSTSLLLDPPCSSAPS---SLIDSFVNRLLWGLVRWDAVYFLRIAEHGYSYEH   78 (443)
T ss_pred             CcccccchHHHHHHHHHHHHHhCcCCCCChHhhcCCCcccCCC---cchHhHHHHHHhcccchhHHHHHHHHHhCCCccc
Confidence            5688999999999999999998766667777666666531121   1113345678888999999999999999999999


Q ss_pred             cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhchhhH
Q 020868           90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI  169 (320)
Q Consensus        90 ~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L~~~~~~~~~~a~~aall~~~~Pasi  169 (320)
                      ++||||+||.++|.+++.+..++.+.++.......+|+++||+++.++++.+|+++++.+++++.|+.++++++++|+++
T Consensus        79 ~~AFfPl~P~lvr~~~~~~~~~l~~~l~~~~~l~~~~~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi  158 (443)
T PF04188_consen   79 EWAFFPLYPLLVRLLSKSLLSPLYGLLSVGSALLNSGILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI  158 (443)
T ss_pred             cccccCcHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH
Confidence            99999999999999995544445444444555667899999999999999999999999989999999999999999999


Q ss_pred             HHHhhchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 020868          170 FYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGA  249 (320)
Q Consensus       170 f~~a~YtEslF~~l~~~~l~~~~~~~~~~a~~~~~la~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  249 (320)
                      |++++||||+|++++++|++.+++++++.+++++++|+++||||+++++++.++.++..+.+..++++..+..+.++..+
T Consensus       159 F~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  238 (443)
T PF04188_consen  159 FLSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAI  238 (443)
T ss_pred             HhhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999988876543333334445567777888


Q ss_pred             HhhHHhhhhHHHHhhhhhhhcccCCcCCCCCccccccCCcchhHhhhhccccccccch
Q 020868          250 LRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWYSKFEAEE  307 (320)
Q Consensus       250 l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~~~  307 (320)
                      +.++++++|++++|+|+|.+||+.++.++.||||++++|++|+|||+|||||||+|.+
T Consensus       239 l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~Yw  296 (443)
T PF04188_consen  239 LSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSFVQSHYWNVGFLRYW  296 (443)
T ss_pred             hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHHHHHHHHccchHHhc
Confidence            8899999999999999999999987543457999999999999999999999999998



Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane

>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only] Back     alignment and domain information
>COG5542 Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase Back     alignment and domain information
>TIGR03766 conserved hypothetical integral membrane protein Back     alignment and domain information
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03663 conserved hypothetical protein TIGR03663 Back     alignment and domain information
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional Back     alignment and domain information
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes Back     alignment and domain information
>PLN02841 GPI mannosyltransferase Back     alignment and domain information
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64 Back     alignment and domain information
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] Back     alignment and domain information
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells Back     alignment and domain information
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2 Back     alignment and domain information
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase Back     alignment and domain information
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein Back     alignment and domain information
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein Back     alignment and domain information
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria Back     alignment and domain information
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02816 mannosyltransferase Back     alignment and domain information
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family Back     alignment and domain information
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5305 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG3463 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues Back     alignment and domain information
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate Back     alignment and domain information
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif Back     alignment and domain information
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription] Back     alignment and domain information
>COG5650 Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system [] Back     alignment and domain information
>PF14897 EpsG: EpsG family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
3rce_A 724 Oligosaccharide transferase to N-glycosylate PROT; 97.13
>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari} Back     alignment and structure
Probab=97.13  E-value=0.011  Score=61.41  Aligned_cols=134  Identities=14%  Similarity=0.011  Sum_probs=92.9

Q ss_pred             cccccHHHHHHHhhc---CCCcc-ccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 020868           69 SIVWDSVYFVRIAQC---GYEYE-QSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL  144 (320)
Q Consensus        69 ~~~WDa~~f~~IA~~---GY~~e-~~~AFfPl~P~l~r~~~~~~~~~l~~~~~~~~~~~~a~~lvs~~~~~~a~~~ly~L  144 (320)
                      +..=|+-||++-|++   |...+ ..-.+-|+++.++..+...++  .        ....+++.+..+++.++++.+|.+
T Consensus        52 ~~~~D~yy~~r~ar~~l~~~~~p~~~~p~g~~~~~l~a~l~~i~g--~--------sl~~v~~~lp~ifg~L~vi~~yll  121 (724)
T 3rce_A           52 ITTNDGYAFAEGARDMIAGFHQPNDLSYFGSSLSTLTYWLYSILP--F--------SFESIILYMSTFFASLIVVPIILI  121 (724)
T ss_dssp             CSCHHHHHHHHHHHHHHHSCCCTTSCCCTTCHHHHHHHHHHHSCS--S--------CHHHHHHHHHHHHGGGGHHHHHHH
T ss_pred             eccCCHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHcC--C--------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466799999987753   43322 223456788998888887642  2        134567777788888899999999


Q ss_pred             HHHHhCChhHHHHHHHHHhhchhhHHHHhh---chhHHHHHHHHHHHHHHH---hhh----HHHHHHHHHHHHhhcchh
Q 020868          145 SVMILKDPDAALCASLLFCFNPASIFYTSI---YSESLYALFSVGGLYYLM---SGA----LNISVLWLAISGCARSNG  213 (320)
Q Consensus       145 ~~~~~~~~~~a~~aall~~~~Pasif~~a~---YtEslF~~l~~~~l~~~~---~~~----~~~a~~~~~la~~~RsnG  213 (320)
                      ++++. +++.|..|+++.++.|+-+.=+++   -+|++..++...++++..   +++    ..++++..++...+-+.|
T Consensus       122 ~~el~-~~~aGl~AAll~ai~P~~i~RS~aG~~D~e~l~i~~~ll~~~~~i~alk~~~~~~~~lagl~~~ly~~~~~gg  199 (724)
T 3rce_A          122 AREYK-LTTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSS  199 (724)
T ss_dssp             HHHTT-CHHHHHHHHHHHTTSHHHHHTSSTTCCSGGGGTTHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHc-CchHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcch
Confidence            99887 688999999999999996544433   367655555544444443   322    246777777888888877




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00