Citrus Sinensis ID: 020874
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | 2.2.26 [Sep-21-2011] | |||||||
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.659 | 0.917 | 0.408 | 1e-35 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.637 | 0.898 | 0.392 | 6e-35 | |
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.675 | 0.850 | 0.367 | 6e-33 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.678 | 0.854 | 0.365 | 2e-32 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.621 | 0.904 | 0.284 | 1e-15 | |
| Q7ADF8 | 222 | 2-deoxyglucose-6-phosphat | N/A | no | 0.578 | 0.833 | 0.298 | 1e-11 | |
| P77247 | 222 | 2-deoxyglucose-6-phosphat | N/A | no | 0.578 | 0.833 | 0.298 | 2e-11 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.55 | 0.814 | 0.321 | 4e-10 | |
| O06995 | 226 | Beta-phosphoglucomutase O | no | no | 0.546 | 0.774 | 0.295 | 1e-09 | |
| Q88A30 | 272 | Phosphoglycolate phosphat | no | no | 0.596 | 0.702 | 0.287 | 3e-09 |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 125/223 (56%), Gaps = 12/223 (5%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NK 137
A+LFD DG L +TE + HR +FN+TF + WD + Y ELL GGKER+ + ++
Sbjct: 4 AILFDVDGTLAETE-ELHRRAFNETFAALGVDWFWDREEYRELLTTTGGKERIARFLRHQ 62
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
G P P IA +H+ KTE F+ L+ + + LRPG+A LI +A G+++AV
Sbjct: 63 KGDPAPLP---------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113
Query: 198 CSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
+T++ V A+ G P R I AGD+V KKP P IY LA L V P V
Sbjct: 114 ATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSPDIYRLALRELDVPPERAVA 173
Query: 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
+EDS GL AAK AG++CIV+ YT E+F AD + D +
Sbjct: 174 LEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRLLDSFAE 216
|
Rhodobacter sphaeroides (taxid: 1063) |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 10/214 (4%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG L +TE + HR +FN+TF + L W + Y LL+ GGKERM +
Sbjct: 5 ALIFDVDGTLAETE-EVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENL 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
G PSD + IA LHK KT+ ++ +I + L PGVA+LID+A G+++A+
Sbjct: 64 G---SGPSDAK-----IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIA 115
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFA-GDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
+T+ V A+++ + ++ A GD V +KKP P +Y A LG+ P++C+
Sbjct: 116 TTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAF 175
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD 291
EDS GLA+A+AAG++ ++T S YT +DF AD
Sbjct: 176 EDSRAGLASARAAGLRVVLTPSEYTRGDDFSAAD 209
|
Rhodobacter capsulatus (taxid: 1061) |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function description |
|---|
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 123/231 (53%), Gaps = 15/231 (6%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
AL+FD DG L DTE H +FN F E L WD LY LLK+ GGKER+ Y+
Sbjct: 2 QALIFDVDGTLADTES-AHLQAFNAAFAEVGLDWYWDAPLYTRLLKVAGGKERLMHYWRM 60
Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
EE R K+ I ++H KT + + LPLRPG+A+LID+A E G+
Sbjct: 61 V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGL 113
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPAIYTLAASTLGVDP 251
+A+ +T+ + A++ LG + + GD KKP P +Y LG++
Sbjct: 114 PLAIATTTTPANLDALLQAPLGADWRRRFAAI-GDAGTTAIKKPAPDVYLAVLERLGLEG 172
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
C+ +EDS GL AA+AAG+ +VT ++++A++ F A V +GDP E
Sbjct: 173 GDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSFEGALLVLPHLGDPGE 223
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
AL+FD DG L DTE H +FN F E L WD LY LLK+ GGKER+ Y+
Sbjct: 2 QALIFDVDGTLADTET-AHLQAFNAAFAEVGLDWHWDAPLYTRLLKVAGGKERLMHYWRM 60
Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
EE R K+ I ++H KT + + LPLRPG+A+LI +A E G+
Sbjct: 61 V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGL 113
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252
+A+ +T+ + A++ LG + R I KKP P +Y LG++
Sbjct: 114 PLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAPDVYLAVLERLGLEAG 173
Query: 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
C+ +EDS GL AA+AAG+ +VT ++++A++ F A V +GDP E
Sbjct: 174 DCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSFEGALLVLPHLGDPAE 223
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG+++DTE + + + F+E G + ++G+++ G +
Sbjct: 4 ALIFDFDGLILDTETHEYEV-LQEIFEEH--GSVLPLSVWGKVIGTAAGFRPFEYLEEQI 60
Query: 139 GWPEKAPSDEE----ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
G K + EE R++F + K RPGV ++ A + G+K
Sbjct: 61 G---KKLNHEELTQLRRERFAKRMESEKA--------------RPGVEAYLNAAKDLGLK 103
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254
+ + S+S+ K V+ + + + E IQ D V KP+P +Y LAA LGV P+ C
Sbjct: 104 IGLASSSDYKWVSGHLKQIGLFDDFEVIQ--TADDVEEVKPNPELYLLAAKNLGVSPAEC 161
Query: 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
+ EDS G AAK AGMKC++ + T F + D + + +
Sbjct: 162 LAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFEDYDHRLESMAE 206
|
Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q7ADF8|YNIC_ECO57 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli O157:H7 GN=yniC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R + LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAELDVM---ASLGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIAR--------AISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S + +++ R + + + +P KP P +Y A+ LGVDP +CV +E
Sbjct: 115 SASPLHMLEKVLTMF--DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE 172
Query: 259 DSTIGLAAAKAAGMKCIVTKS 279
DS G+ A+KAA M+ IV +
Sbjct: 173 DSVNGMIASKAARMRSIVVPA 193
|
Catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate (2dGlu6P). Escherichia coli O157:H7 (taxid: 83334) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 8 |
| >sp|P77247|YNIC_ECOLI 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli (strain K12) GN=yniC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R + LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAELDVM---ASLGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIAR--------AISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S + +++ R + + + +P KP P +Y A+ LGVDP +CV +E
Sbjct: 115 SASPLHMLEKVLTMF--DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE 172
Query: 259 DSTIGLAAAKAAGMKCIVTKS 279
DS G+ A+KAA M+ IV +
Sbjct: 173 DSVNGMIASKAARMRSIVVPA 193
|
Catalyzes strongly the dephosphorylation of 2-deoxyglucose 6-phosphate (2dGlu6P) and slightly the dephosphorylation of mannose 6-phosphate (Man6P), 2-deoxyribose-5-phosphate (2dRib5P), ribose-5-phosphate (Rib5P) and glucose-6-phosphate (Glu6P). Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 EC: 3 |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKE-LGVTWDVDLYGELLKIGGGKERMTAYFN 136
A++FD DGVL+DTE + F + E G + DL+ +I G ER
Sbjct: 2 EAVIFDMDGVLMDTEP----LYFEAYRRVAESYGKPYTEDLHR---RIMGVPER------ 48
Query: 137 KTGWP--EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
G P +A ++ + F +H+ K +F +LL PGV + ++ K +K
Sbjct: 49 -EGLPILMEALEIKDSLENFKKRVHEEKKRVF-----SELLKENPGVREALEFVKSKRIK 102
Query: 195 VAVC-STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253
+A+ ST +A+ + L E+ + +F GD V KPDP IY L L V P
Sbjct: 103 LALATSTPQREALERLRRLDL--EKYFDVMVF-GDQVKNGKPDPEIYLLVLERLNVVPEK 159
Query: 254 CVVVEDSTIGLAAAKAAGMKCI 275
VV EDS G+ AAK+AG++ I
Sbjct: 160 VVVFEDSKSGVEAAKSAGIERI 181
|
Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 25/200 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DGV+ DT + H +++ +++ + +D D+ E LK +E + +
Sbjct: 3 AVIFDLDGVITDT-AEYHFLAWKHI--AEQIDIPFDRDM-NERLKGISREESLESILIFG 58
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKGVKVA 196
G K + E++ L RK + +LI KL P L PG+ +L+ Q + +K+
Sbjct: 59 GAETKYTNAEKQ------ELMHRKNRDYQMLI-SKLTPEDLLPGIGRLLCQLKNENIKIG 111
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----RKKPDPAIYTLAASTLGVDPS 252
+ S+S + I+ R I F V P + KPDP I+ AA+ L V P+
Sbjct: 112 LASSS--RNAPKIL------RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPA 163
Query: 253 SCVVVEDSTIGLAAAKAAGM 272
C +ED+ G++A K+AGM
Sbjct: 164 DCAAIEDAEAGISAIKSAGM 183
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|Q88A30|GPH_PSESM Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0567 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
A LP ++FD DG LVD+ D L V D + EL + G E +
Sbjct: 9 AGKLPKLIMFDLDGTLVDSVPD--------------LAVAVDT-MLAELGRPTAGLESVR 53
Query: 133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIEKK--LLPLRPGVAKLIDQ 187
A+ G P +A ++ + +L +R ++FM +K + PGV + +
Sbjct: 54 AWVG-NGAPVLVRRALANNLDHSGVDEALAERGLDIFMRAYAEKHEFTVVYPGVRETLKW 112
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+ GV++A+ + E+ V ++ + LG R + I GD +P+KKPDPA
Sbjct: 113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDPAALFFVMKM 169
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282
GV S + V DS + AAKAAG+ C+ Y
Sbjct: 170 AGVPASQSLFVGDSRSDVQAAKAAGVACVALSYGYN 205
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Pseudomonas syringae pv. tomato (strain DC3000) (taxid: 223283) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| 255540407 | 321 | 2-deoxyglucose-6-phosphate phosphatase, | 0.987 | 0.984 | 0.781 | 1e-133 | |
| 118488927 | 328 | unknown [Populus trichocarpa x Populus d | 0.871 | 0.850 | 0.848 | 1e-131 | |
| 224136009 | 328 | predicted protein [Populus trichocarpa] | 0.871 | 0.850 | 0.848 | 1e-131 | |
| 225456794 | 324 | PREDICTED: protein CbbY [Vitis vinifera] | 0.865 | 0.854 | 0.828 | 1e-131 | |
| 449440594 | 319 | PREDICTED: protein CbbY-like [Cucumis sa | 0.868 | 0.871 | 0.836 | 1e-129 | |
| 21554817 | 319 | unknown [Arabidopsis thaliana] | 0.85 | 0.852 | 0.835 | 1e-128 | |
| 18408627 | 319 | haloacid dehalogenase-like hydrolase dom | 0.85 | 0.852 | 0.831 | 1e-127 | |
| 51970096 | 319 | unknown protein [Arabidopsis thaliana] | 0.85 | 0.852 | 0.831 | 1e-127 | |
| 388512915 | 329 | unknown [Lotus japonicus] | 0.890 | 0.866 | 0.773 | 1e-126 | |
| 4678346 | 686 | putative protein [Arabidopsis thaliana] | 0.843 | 0.393 | 0.830 | 1e-126 |
| >gi|255540407|ref|XP_002511268.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223550383|gb|EEF51870.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/325 (78%), Positives = 277/325 (85%), Gaps = 9/325 (2%)
Query: 1 MASTTFSLSLSTLASSTAYNSG---NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTS 57
MAS + SLSL+T + S++ + + P IS + KS L SS+ G+++ V + +
Sbjct: 1 MASNSISLSLATFSISSSPSFSSSQKNTP-ISILKSCKSKL---SSTLFGTKVCVDKTKA 56
Query: 58 SA--NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV 115
S N S + TC AS LPSALLFDCDGVLVDTEKDGHRISFNDTF E+ELGVTWDV
Sbjct: 57 SKAINKRSTTSTGFTCLASALPSALLFDCDGVLVDTEKDGHRISFNDTFNERELGVTWDV 116
Query: 116 DLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
DLYGELLKIGGGKERMTAYFNKTGWPEKAP +EEERK+FIASLHKRKTELFM LIEKKLL
Sbjct: 117 DLYGELLKIGGGKERMTAYFNKTGWPEKAPKNEEERKEFIASLHKRKTELFMALIEKKLL 176
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
PLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVPRKKP
Sbjct: 177 PLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPRKKP 236
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295
DPAIYTLAA+TL VDPSSCVVVEDS IGLAAAKAAGMKCIVTKS YTA+EDFLNADAVFD
Sbjct: 237 DPAIYTLAANTLAVDPSSCVVVEDSAIGLAAAKAAGMKCIVTKSGYTADEDFLNADAVFD 296
Query: 296 CIGDPPEERFDLAFCGSLLQKQYVS 320
CIGDPPEE FDLAFCGSLL+KQYVS
Sbjct: 297 CIGDPPEECFDLAFCGSLLEKQYVS 321
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118488927|gb|ABK96272.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/283 (84%), Positives = 254/283 (89%), Gaps = 4/283 (1%)
Query: 42 SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
SSS LG+R+ V +T+ + + TC S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46 SSSLLGTRIRVYNKTARTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105
Query: 98 ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP EEERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEEERKEFIAS 165
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225
Query: 218 RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277
RAEKI+IFAGDVVPRKKPDPAIYTLAA+TLGVDPSSCVVVEDS IGLAAAKAAGMKCIVT
Sbjct: 226 RAEKIKIFAGDVVPRKKPDPAIYTLAANTLGVDPSSCVVVEDSAIGLAAAKAAGMKCIVT 285
Query: 278 KSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
KS YTA+EDFLNADAVF CIGDPPEE FDLAFCGSLL+KQYVS
Sbjct: 286 KSGYTADEDFLNADAVFHCIGDPPEECFDLAFCGSLLEKQYVS 328
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136009|ref|XP_002322216.1| predicted protein [Populus trichocarpa] gi|222869212|gb|EEF06343.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/283 (84%), Positives = 254/283 (89%), Gaps = 4/283 (1%)
Query: 42 SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
SSS LG+R+ V +T+ + + TC S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46 SSSLLGTRIRVYNKTTRTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105
Query: 98 ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP E ERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEVERKEFIAS 165
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225
Query: 218 RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277
RAEKI+IFAGDVVPRKKPDPAIYTLAA+TLGVDPSSCVVVEDS IGLAAAKAAGMKCIVT
Sbjct: 226 RAEKIKIFAGDVVPRKKPDPAIYTLAANTLGVDPSSCVVVEDSAIGLAAAKAAGMKCIVT 285
Query: 278 KSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
KS YTA+EDFLNADAVFDCIGDPPEE FDLAFCGSLL+KQYVS
Sbjct: 286 KSGYTADEDFLNADAVFDCIGDPPEECFDLAFCGSLLEKQYVS 328
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456794|ref|XP_002277650.1| PREDICTED: protein CbbY [Vitis vinifera] gi|297733644|emb|CBI14891.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/292 (82%), Positives = 256/292 (87%), Gaps = 15/292 (5%)
Query: 42 SSSFLGSRLNVSRRT-------SSANPMSMRNVRVT------CSASVLPSALLFDCDGVL 88
SSS G+R ++RR ++ P+ R R + CSA LPSALLFDCDGVL
Sbjct: 35 SSSLFGTRPGITRRAITTTTTTTTTRPVIRRGARHSGVRFSVCSA--LPSALLFDCDGVL 92
Query: 89 VDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDE 148
VDTEKDGHRISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAP E
Sbjct: 93 VDTEKDGHRISFNDTFAERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPKSE 152
Query: 149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA 208
EERK+FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL KGV VAVCSTSNEKAV+A
Sbjct: 153 EERKEFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALGKGVNVAVCSTSNEKAVSA 212
Query: 209 IVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAK 268
IVS LLGPERAEKI+IFAGDVVPRKKPDPAIYTLAASTLGV+PS CVVVEDS IGLAAAK
Sbjct: 213 IVSCLLGPERAEKIKIFAGDVVPRKKPDPAIYTLAASTLGVEPSRCVVVEDSAIGLAAAK 272
Query: 269 AAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
AAGMKCIVTKS YTA+EDFLNADAVFDCIGDPPEERFDLAFCGSLL+KQYVS
Sbjct: 273 AAGMKCIVTKSGYTADEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS 324
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440594|ref|XP_004138069.1| PREDICTED: protein CbbY-like [Cucumis sativus] gi|449501370|ref|XP_004161349.1| PREDICTED: protein CbbY-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/282 (83%), Positives = 253/282 (89%), Gaps = 4/282 (1%)
Query: 42 SSSFLGSRLNVSRRTSSANPMSMRNVR--VTCSAS-VLPSALLFDCDGVLVDTEKDGHRI 98
S+S LG L++ TS P +N +TC AS +LPSALLFDCDGVLVDTEKDGHRI
Sbjct: 39 STSLLGKSLSL-YPTSRIRPTDAKNASNGITCQASSILPSALLFDCDGVLVDTEKDGHRI 97
Query: 99 SFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL 158
SFN+TF+EKELGVTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE+ERK FIA L
Sbjct: 98 SFNETFEEKELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEDERKAFIAGL 157
Query: 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
HKRKT+LFM LIEK+LLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG +R
Sbjct: 158 HKRKTDLFMALIEKQLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGSQR 217
Query: 219 AEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278
AE+I+IFAGDVVPRKKPDPAIY LAA+TLGVDPSSCVVVEDS IGLAAAKAAGMKCIVTK
Sbjct: 218 AEQIKIFAGDVVPRKKPDPAIYILAANTLGVDPSSCVVVEDSAIGLAAAKAAGMKCIVTK 277
Query: 279 SSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
S YTAEEDFLNADAVFDCIGDPPEERFDL FCGSLL+KQYVS
Sbjct: 278 SGYTAEEDFLNADAVFDCIGDPPEERFDLTFCGSLLEKQYVS 319
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21554817|gb|AAM63700.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/279 (83%), Positives = 248/279 (88%), Gaps = 7/279 (2%)
Query: 49 RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
+L + ++ A PM S R+V VTCSAS LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41 KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100
Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160
Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
KTELFMVLIEKKLLPLRPGVAKL+DQAL GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220
Query: 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281
I+IFAGDVVP+KKPDPAIY LAA TLGVDPS CVVVEDS IGLAAAKAAGM CIVTKS Y
Sbjct: 221 IKIFAGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGY 280
Query: 282 TAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
TA+EDF NADAVFDCIGDPPEERFDLAFCGSLLQKQ+VS
Sbjct: 281 TADEDFENADAVFDCIGDPPEERFDLAFCGSLLQKQFVS 319
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18408627|ref|NP_566903.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|13877975|gb|AAK44065.1|AF370250_1 unknown protein [Arabidopsis thaliana] gi|17104703|gb|AAL34240.1| unknown protein [Arabidopsis thaliana] gi|26451286|dbj|BAC42744.1| unknown protein [Arabidopsis thaliana] gi|51969874|dbj|BAD43629.1| unknown protein [Arabidopsis thaliana] gi|51971787|dbj|BAD44558.1| unknown protein [Arabidopsis thaliana] gi|332644893|gb|AEE78414.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/279 (83%), Positives = 248/279 (88%), Gaps = 7/279 (2%)
Query: 49 RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
+L + ++ A PM S R+V VTCSAS LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41 KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100
Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160
Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
KTELFMVLIEKKLLPLRPGVAKL+DQAL GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220
Query: 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281
I+IFAGDVVP+KKPDPAIY LAA TLGVDPS CVVVEDS IGLAAAKAAGM CIVTKS Y
Sbjct: 221 IKIFAGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGY 280
Query: 282 TAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
TA+EDF NADAVFDCIGDPPEERFDLAFCGSLL+KQ+VS
Sbjct: 281 TADEDFENADAVFDCIGDPPEERFDLAFCGSLLRKQFVS 319
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51970096|dbj|BAD43740.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/279 (83%), Positives = 247/279 (88%), Gaps = 7/279 (2%)
Query: 49 RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
+L + ++ A PM S R+V VTCSAS LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41 KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100
Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
DTFKE +L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKEGDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160
Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
KTELFMVLIEKKLLPLRPGVAKL+DQAL GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220
Query: 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281
I+IFAGDVVP+KKPDPAIY LAA TLGVDPS CVVVEDS IGLAAAKAAGM CIVTKS Y
Sbjct: 221 IKIFAGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGY 280
Query: 282 TAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
TA+EDF NADAVFDCIGDPPEERFDLAFCGSLL+KQ+VS
Sbjct: 281 TADEDFENADAVFDCIGDPPEERFDLAFCGSLLRKQFVS 319
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388512915|gb|AFK44519.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/305 (77%), Positives = 258/305 (84%), Gaps = 20/305 (6%)
Query: 23 NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNV---RVTCSAS----V 75
+H+PT S L+ +S L S L +S +S A SMR R++CSAS
Sbjct: 38 HHVPTSS----------LTGTSTLAS-LKIS--SSPATTTSMRTATRRRLSCSASASPST 84
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
LPSALLFDCDGVLVDTEKDGHRISFN TF+E+ELGVTWDVDLYGELLKIGGGKERMTAYF
Sbjct: 85 LPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYF 144
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
NKTGWP APS E+ERK+F+ASLHK+KTELFM LIEKKLLPLRPGVAKL+DQAL +GV V
Sbjct: 145 NKTGWPANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNV 204
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
AVCSTSNE AV+AIVSFLLGPERAEKIQIFAGDVV RKKPDPAIY LAA+TLGV+PS CV
Sbjct: 205 AVCSTSNENAVSAIVSFLLGPERAEKIQIFAGDVVHRKKPDPAIYILAANTLGVEPSRCV 264
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQ 315
VVEDS IGLAAAKAAGMK I+TKS YTA+EDFLNADAVFD IGDPPEERFDLAFCGSLL+
Sbjct: 265 VVEDSAIGLAAAKAAGMKYIITKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLE 324
Query: 316 KQYVS 320
KQYVS
Sbjct: 325 KQYVS 329
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/277 (83%), Positives = 245/277 (88%), Gaps = 7/277 (2%)
Query: 49 RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
+L + ++ A PM S R+V VTCSAS LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41 KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100
Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160
Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
KTELFMVLIEKKLLPLRPGVAKL+DQAL GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220
Query: 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281
I+IFAGDVVP+KKPDPAIY LAA TLGVDPS CVVVEDS IGLAAAKAAGM CIVTKS Y
Sbjct: 221 IKIFAGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGY 280
Query: 282 TAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQY 318
TA+EDF NADAVFDCIGDPPEERFDLAFCGSLL+K Y
Sbjct: 281 TADEDFENADAVFDCIGDPPEERFDLAFCGSLLRKHY 317
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.818 | 0.821 | 0.858 | 6e-119 | |
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.746 | 0.756 | 0.381 | 1.8e-39 | |
| TIGR_CMR|GSU_1839 | 228 | GSU_1839 "hydrolase, haloacid | 0.634 | 0.890 | 0.297 | 1.1e-14 | |
| TIGR_CMR|BA_4427 | 221 | BA_4427 "hydrolase, haloacid d | 0.425 | 0.615 | 0.340 | 4.9e-14 | |
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.45 | 0.387 | 0.337 | 1.4e-13 | |
| UNIPROTKB|P77247 | 222 | yniC [Escherichia coli K-12 (t | 0.609 | 0.878 | 0.305 | 1.5e-13 | |
| UNIPROTKB|Q7ADF8 | 222 | yniC "2-deoxyglucose-6-phospha | 0.593 | 0.855 | 0.301 | 3.4e-13 | |
| UNIPROTKB|O06995 | 226 | yvdM "Beta-phosphoglucomutase" | 0.556 | 0.787 | 0.299 | 4.4e-13 | |
| UNIPROTKB|Q9KN63 | 219 | VC_A0102 "CbbY family protein" | 0.353 | 0.515 | 0.356 | 5.1e-13 | |
| TIGR_CMR|VC_A0102 | 219 | VC_A0102 "haloacid dehalogenas | 0.353 | 0.515 | 0.356 | 5.1e-13 |
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 231/269 (85%), Positives = 243/269 (90%)
Query: 59 ANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
A PM S R+V VTCSAS LPSALLFDCDGVLVDTEKDGHRISFNDTFKE++L V
Sbjct: 51 AKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFNDTFKERDLNV 110
Query: 112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
TWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+KTELFMVLIE
Sbjct: 111 TWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIE 170
Query: 172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
KKLLPLRPGVAKL+DQAL GVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVP
Sbjct: 171 KKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVP 230
Query: 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD 291
+KKPDPAIY LAA TLGVDPS CVVVEDS IGLAAAKAAGM CIVTKS YTA+EDF NAD
Sbjct: 231 KKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENAD 290
Query: 292 AVFDCIGDPPEERFDLAFCGSLLQKQYVS 320
AVFDCIGDPPEERFDLAFCGSLL+KQ+VS
Sbjct: 291 AVFDCIGDPPEERFDLAFCGSLLRKQFVS 319
|
|
| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 98/257 (38%), Positives = 149/257 (57%)
Query: 55 RTSSANPMSMRNVRVTCSASVLPS--ALLFDCDGVLVDTEKDGHRISFNDTFKEKEL--- 109
R S + S V SA L S AL+FDCDGV++++E + HR ++ND F ++
Sbjct: 39 RFKSRSVYSKSRVSSPVSALPLRSLEALIFDCDGVILESE-NLHRQAYNDAFSHFDVRCP 97
Query: 110 -----GVTWDVDLYGELLK-IGGGKERMTAYFNKTGWP-----EKAPSDEEERKQFIASL 158
+ W ++ Y + +GGGK +M YF + GWP + P ++++R + I +L
Sbjct: 98 PSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQNDDDRAKLIDTL 157
Query: 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
KTE + +I+ + RPGV +L+D+A G K+AVCS + + +V + L+ ER
Sbjct: 158 QDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVILCLENLIDIER 217
Query: 219 AEKIQIF-AGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277
+ + F AGD V KKPDP+IY AA LGV C+VVEDS IGL AA AGM C++T
Sbjct: 218 FQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAATKAGMSCVIT 277
Query: 278 KSSYTAEEDFLNADAVF 294
+S T++++F +A AV+
Sbjct: 278 YTSSTSDQNFNDAIAVY 294
|
|
| TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 69/232 (29%), Positives = 109/232 (46%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD--VDLYGELLKIG-GGKERMTAY 134
SA++FD DG++VDTE +R +F + G +W+ VD+Y +G ++
Sbjct: 3 SAVIFDFDGIIVDTEPLHYR-AFQAILEPIGFGYSWEAYVDVY-----MGYDDRDAFREA 56
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
F G +D E+R+ + L RK F +I + P PGV +LI + ++
Sbjct: 57 FRVRG------ADLEDRE--LEGLIARKAAAFQEIIASGVTPY-PGVVELI-RNIKANHP 106
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG------ 248
VA+CS + + I+ L G + + A D V KPDPA Y LA L
Sbjct: 107 VALCSGALRSDILPILEGL-GLSGIFDVMVTA-DEVSASKPDPASYALAVRRLTAAFPNR 164
Query: 249 -VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
+ P +C+ +ED+ G+A+A AG+ + +SY A A V D + D
Sbjct: 165 QIRPETCIAIEDTPAGIASATGAGIGVLAVTNSYPAVR-LGGARRVVDSLAD 215
|
|
| TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 50/147 (34%), Positives = 76/147 (51%)
Query: 143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSN 202
K D+ K+ + +LHK K K+ R GV + +++A E G+K+A+ S+S+
Sbjct: 60 KEKFDKYALKEKVKNLHKEKM---------KIPEARDGVKEYLEEAKEMGLKIALASSSS 110
Query: 203 EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI 262
+ V + L + E I+ + V + KPDPA+Y +A LG+D S V EDS
Sbjct: 111 REWVIPFLEELQIRDYFEVIK--TREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLN 168
Query: 263 GLAAAKAAGMKCIVTKSSYTAEEDFLN 289
GL AA AAG+ C+V + T F N
Sbjct: 169 GLKAAIAAGLTCVVVPNDVTRNLPFEN 195
|
|
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/157 (33%), Positives = 83/157 (52%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGGGKER--MTAYF 135
A++ + D V++DT +R +FN F++ L W +Y +LL+ G E + YF
Sbjct: 80 AVILEVDRVMIDTWSS-NRQAFNVAFQKLGLDCANWPEPVYSDLLRKGAADEEKMLLLYF 138
Query: 136 NKTGWPEKAPSDEEERKQFIAS-LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
N+ GWP P+ E + F+ S L ++K + LI K L PLR GV + ID A + V
Sbjct: 139 NQIGWPSSLPTSE--KASFVKSVLREKKNAMDEFLISKSL-PLRSGVQEFIDNAYAEKVP 195
Query: 195 VAVCST---SNEKAVTAIVSFLLGPERAEKIQIFAGD 228
VA+ + S +K +IV +LG ER +++ GD
Sbjct: 196 VAIVTAYCKSGDKVALSIVE-MLGQERLPNVKVI-GD 230
|
|
| UNIPROTKB|P77247 yniC [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 177 (67.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 66/216 (30%), Positives = 101/216 (46%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R D LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAEL-DVMAS--LGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIARA--------ISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAG-DVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
S S + +++ + + A + +P KP P +Y A+ LGVDP +CV +
Sbjct: 115 SASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 171
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEED--FLNAD 291
EDS G+ A+KAA M+ IV + A+ D F+ AD
Sbjct: 172 EDSVNGMIASKAARMRSIVVPAP-EAQNDPRFVLAD 206
|
|
| UNIPROTKB|Q7ADF8 yniC "2-deoxyglucose-6-phosphate phosphatase" [Escherichia coli O157:H7 (taxid:83334)] | Back alignment and assigned GO terms |
|---|
Score = 174 (66.3 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 63/209 (30%), Positives = 97/209 (46%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E R D LGV D+ EL G + M
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAEL-DVMAS--LGV--DISRRNELPDTLGLRIDMVVDLWYA 63
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA + L+E+ PL PGV + + E+G+ V +
Sbjct: 64 RQPWNGPSRQEVVERVIARA--------ISLVEETR-PLLPGVREAVALCKEQGLLVGLA 114
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAG-DVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
S S + +++ + + A + +P KP P +Y A+ LGVDP +CV +
Sbjct: 115 SASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 171
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
EDS G+ A+KAA M+ IV + A+ D
Sbjct: 172 EDSVNGMIASKAARMRSIVVPAP-EAQND 199
|
|
| UNIPROTKB|O06995 yvdM "Beta-phosphoglucomutase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] | Back alignment and assigned GO terms |
|---|
Score = 173 (66.0 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/197 (29%), Positives = 102/197 (51%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DGV+ DT + H +++ +++ + +D D+ E LK G +E
Sbjct: 3 AVIFDLDGVITDTA-EYHFLAWKHI--AEQIDIPFDRDM-NERLK-GISREESLESILIF 57
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKGVKVA 196
G E ++ E KQ + +H RK + +LI K L P L PG+ +L+ Q + +K+
Sbjct: 58 GGAETKYTNAE--KQEL--MH-RKNRDYQMLISK-LTPEDLLPGIGRLLCQLKNENIKIG 111
Query: 197 VCSTS-NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
+ S+S N + ++ ++ A I + + KPDP I+ AA+ L V P+ C
Sbjct: 112 LASSSRNAPKILRRLA-IIDDFHA----IVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 166
Query: 256 VVEDSTIGLAAAKAAGM 272
+ED+ G++A K+AGM
Sbjct: 167 AIEDAEAGISAIKSAGM 183
|
|
| UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 155 (59.6 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
LH + + ++ + +P + GV L++ + + VAV +TS +K V I L G +
Sbjct: 70 LHNEWRQRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAV-ATSTQKEVALIKLQLAGLD 128
Query: 218 RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGM 272
I G V + KP P IY LAA LGV+P C+ EDS G+ AA AA M
Sbjct: 129 HYFA-NITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
| TIGR_CMR|VC_A0102 VC_A0102 "haloacid dehalogenase/epoxide hydrolase family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 155 (59.6 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
LH + + ++ + +P + GV L++ + + VAV +TS +K V I L G +
Sbjct: 70 LHNEWRQRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAV-ATSTQKEVALIKLQLAGLD 128
Query: 218 RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGM 272
I G V + KP P IY LAA LGV+P C+ EDS G+ AA AA M
Sbjct: 129 HYFA-NITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 320 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 1e-163 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 2e-39 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 1e-32 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 3e-27 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 5e-26 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 6e-23 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 2e-22 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 6e-21 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 1e-19 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 5e-17 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 3e-16 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 6e-15 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 1e-14 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 6e-14 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 5e-13 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 7e-13 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 3e-11 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 9e-11 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 6e-10 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 8e-10 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 8e-09 | |
| TIGR02247 | 211 | TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-termin | 1e-08 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 3e-08 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 2e-07 | |
| TIGR01428 | 198 | TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo | 2e-06 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-06 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 5e-06 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 5e-06 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 6e-06 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 9e-06 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 1e-05 | |
| TIGR01422 | 253 | TIGR01422, phosphonatase, phosphonoacetaldehyde hy | 1e-05 | |
| PRK13478 | 267 | PRK13478, PRK13478, phosphonoacetaldehyde hydrolas | 4e-05 | |
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 4e-05 | |
| PRK08942 | 181 | PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p | 0.001 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.002 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 0.002 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 455 bits (1173), Expect = e-163
Identities = 188/283 (66%), Positives = 211/283 (74%), Gaps = 5/283 (1%)
Query: 41 SSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISF 100
SSS+ L S + SAS LP ALLFDCDGVLV+TE+DGHR++F
Sbjct: 4 SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63
Query: 101 NDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSDEEERKQFI 155
ND FKE L V WDV+LY ELL IGGGKERMT YFN+ GWP EKAP DEEERK+ +
Sbjct: 64 NDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEERKELV 123
Query: 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215
SLH RKTELF LIE LPLRPGV +L+D+AL G+KVAVCSTSNEKAV+ IV+ LLG
Sbjct: 124 DSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLG 183
Query: 216 PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI 275
PERA+ + +FAGD VP+KKPDP IY LAA TLGVDPS CVVVEDS IGL AAKAAGM+CI
Sbjct: 184 PERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCI 243
Query: 276 VTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLLQKQY 318
VTKSSYTA+EDF ADAVFDC+GD P E FDL FC SLL KQ
Sbjct: 244 VTKSSYTADEDFSGADAVFDCLGDVPLEDFDLLFCESLLTKQQ 286
|
Length = 286 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 2e-39
Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DG LVD+E H ++ + KE G+ + EL GGG R+ K
Sbjct: 4 AVIFDMDGTLVDSE-PLHARAWLEALKE--YGIEISDEEIREL--HGGGIARIIDLLRKL 58
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
+ P+D E ++ E + +E L PGV +L++Q +G+ +AV
Sbjct: 59 -AAGEDPADLAELER-------LLYEAEALELEG--LKPIPGVVELLEQLKARGIPLAVA 108
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S+S +A +++ L + + I + A DV R KP P IY LAA LGVDP CVVVE
Sbjct: 109 SSSPRRAAERVLARLGLLDYFDVI-VTADDV-ARGKPAPDIYLLAAERLGVDPEECVVVE 166
Query: 259 DSTIGLAAAKAAGMKCI-VTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308
DS G+ AAKAAGM+ + V D L+A + D E L
Sbjct: 167 DSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALLE 217
|
Length = 221 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 1e-32
Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 22/198 (11%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DGVLVDT E + +L + + +
Sbjct: 1 AVLFDLDGVLVDTAHAIA-----KLVDRAEFPLV-PDELGVSEV------GSLELALRRW 48
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
E+ + +LF +EK+ L PGV L++ +G K+A+
Sbjct: 49 KAKYGRTMSAEDAQLLY-------KQLFYEALEKEGLKPLPGVRALLEALRARGKKLALL 101
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
+ S A + LG + I + DV KPDP IY A LG+ PS C+ V+
Sbjct: 102 TNSP--RADAKLVLELGLRALFDVVIDSSDVG-LGKPDPDIYLQALKKLGLKPSECLFVD 158
Query: 259 DSTIGLAAAKAAGMKCIV 276
DS G+ AAKAAGM ++
Sbjct: 159 DSPAGIDAAKAAGMHTVL 176
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-27
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
A++FD DGV+ DT H ++ + G+++D Y E LK G +E +
Sbjct: 1 YKAVIFDMDGVITDTAP-LHAQAWKHIAAK--YGISFDKQ-YNESLK-GLSREDILRAIL 55
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
K EE Q L +RK EL+ L+ + + PG+ L+ + KG+ V
Sbjct: 56 K---LRGDGLSLEEIHQ----LAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVG 108
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDPAIYTLAASTLGVDPS 252
+ S+S +L + F V KP P + LAA LGV P+
Sbjct: 109 LGSSS------KNAPRIL--AKLGLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPN 160
Query: 253 SCVVVEDSTIGLAAAKAAGMKCIV 276
C+V ED+ G+ AA+AAGM +
Sbjct: 161 ECIVFEDALAGVQAARAAGMFAVA 184
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 5e-26
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DG LVD+ + +FN E L +D IG G + +
Sbjct: 6 AILFDLDGTLVDSA-EDILRAFNAALAELGLP---PLDEEEIRQLIGLGLDELIERLLGE 61
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
+DEE + + L + + E L PGV +L+ G K+ +
Sbjct: 62 -------ADEEAAAELVERLREEFLTAYA---ELLESRLFPGVKELLAALKSAGYKLGIV 111
Query: 199 STSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
+ E+ + ++ L L I GD VP KPDP L LG+DP ++V
Sbjct: 112 TNKPERELDILLKALGLADYFDV---IVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMV 168
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLN--ADAVFDCIGD 299
DS + AAKAAG+ + Y + E+ AD V D + +
Sbjct: 169 GDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAE 212
|
Length = 220 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 6e-23
Identities = 46/196 (23%), Positives = 72/196 (36%), Gaps = 14/196 (7%)
Query: 79 ALLFDCDGVLVDTEKD-GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
A++FD DG L D E + + + + KE +
Sbjct: 3 AVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVI-------AAGENLTKEGREELVRR 55
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
A + E + +L ++ + PL PG + + + E G+K+A+
Sbjct: 56 LLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAI 115
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPAIYTLAASTLGVDPSSCV 255
+ N AI L + + A V KPDP I+ LA LGV P +
Sbjct: 116 LTGDNRLTANAIARLLGLFDAL----VSADLYGLVGVGKPDPKIFELALEELGVKPEEVL 171
Query: 256 VVEDSTIGLAAAKAAG 271
+V D + AAKAAG
Sbjct: 172 MVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 22/196 (11%)
Query: 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
++FD DG L+D + + + LG+ + E GG A
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAER--LGLDISAEELREA----GGLPFDEAL---AD 51
Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
+ P D +E + + + L P V +L+ + KGVK+ + S
Sbjct: 52 LLREHPIDPDEILEALLEYNLESR-----------LEPFPDVVELLRRLKAKGVKLVILS 100
Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVED 259
+ +AV ++ L + + +F D V +KPDP Y LG+ P + ++D
Sbjct: 101 NGSREAVERLLEKLGLLDLFD--AVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDD 158
Query: 260 STIGLAAAKAAGMKCI 275
S L AA+AAG+K +
Sbjct: 159 SPEDLEAARAAGIKTV 174
|
Length = 176 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 6e-21
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 35/207 (16%)
Query: 79 ALLFDCDGVLVDTEK----DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY 134
A++FD DGV+ DT + ++ ELG+ +D + E LK +E +
Sbjct: 1 AVIFDLDGVITDTAEYHYLAWKHLA-------DELGIPFDEEF-NESLKGVSREESLERI 52
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKG 192
+ G EEE+++ L +RK + ++ L+ K+L P + PG+ L+ +
Sbjct: 53 LDLGG----KKYSEEEKEE----LAERKNDYYVELL-KELTPADVLPGIKSLLADLKKNN 103
Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----KPDPAIYTLAASTLG 248
+K+A+ S S +L E+ E I F V P + KPDP I+ AA LG
Sbjct: 104 IKIALASASKN------APTIL--EKLELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLG 155
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGMKCI 275
V PS C+ +ED+ G+ A KAAGM +
Sbjct: 156 VSPSECIGIEDAQAGIEAIKAAGMFAV 182
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 1e-19
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLY------GELLKIGGGKERM 131
SA+LFD DGVL ++E + R + D F E+GV V+ + GE +GG
Sbjct: 76 SAVLFDMDGVLCNSE-EPSRRAAVDVF--AEMGVEVTVEDFVPFMGTGEANFLGG----- 127
Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR----PGVAKLIDQ 187
+ G P ++R F + +EK P PG +LI Q
Sbjct: 128 --VASVKGVKGFDPDAAKKR-------------FFEIYLEKYAKPNSGIGFPGALELITQ 172
Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL 247
KG+KVAV S+++ V A ++ G + I + D KP P I+ AA L
Sbjct: 173 CKNKGLKVAVASSADRIKVDANLA-AAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231
Query: 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284
GV S CVV+ED+ G+ AA+AAGM+CI ++ + E
Sbjct: 232 GVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEE 268
|
Length = 1057 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 5e-17
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
L S ++ D DG L++T+ G+ DV L L+K G + A
Sbjct: 10 LVSHVILDLDGTLLNTD-----------------GIVSDV-LKAFLVKYGKQWDGREAQK 51
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE--KKLLPLRPGVAKLIDQALEKGV 193
P +A + E S + +E+ +L E + L PG +LI GV
Sbjct: 52 IVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQWCNIKAL-PGANRLIKHLKSHGV 110
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253
+A+ S S + A +S G + + + I GD V + KP P I+ AA L V+PS+
Sbjct: 111 PMALASNSPRANIEAKISCHQGWKESFSV-IVGGDEVEKGKPSPDIFLEAAKRLNVEPSN 169
Query: 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307
C+V+EDS G+ A KAAGM+ I S + +AD V + + D E++ L
Sbjct: 170 CLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGL 223
|
Length = 382 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 3e-16
Identities = 57/233 (24%), Positives = 83/233 (35%), Gaps = 44/233 (18%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-------TWDVDLYGELLKIGGGKERM 131
A+ FD DG LVD+ D + N L TW +G G + +
Sbjct: 8 AVAFDLDGTLVDSAPDLAA-AVNAALAALGLPPAGEERVRTW----------VGNGADVL 56
Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKL 184
W + P DEE ++ + + L+ PGV +
Sbjct: 57 VE--RALTWAGREP-DEELLEKLRELFDRHYAENVAGGSRLY------------PGVKET 101
Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244
+ G +AV + V ++ L + + GD +P KKPDPA LA
Sbjct: 102 LAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNKKPDPAPLLLAC 159
Query: 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFD 295
LG+DP + V DS + AA+AAG + Y E D V D
Sbjct: 160 EKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID 212
|
Length = 226 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 6e-15
Identities = 53/224 (23%), Positives = 86/224 (38%), Gaps = 16/224 (7%)
Query: 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
+LFD DG LVD+ D + N L + G IG G +
Sbjct: 1 VLFDLDGTLVDSAPDIAA-AVNMALAALGLPPATLARVIG---FIGNGVPVLMERVLAWA 56
Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
E D + + + E+ +L + PGV + KG+++ + +
Sbjct: 57 GQEP---DAQRVAELRKLFDRHYEEV-----AGELTSVFPGVEATLGALRAKGLRLGLVT 108
Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVED 259
++ L + + GD + ++KP P LAA LGV P V V D
Sbjct: 109 NKPTPLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGD 166
Query: 260 STIGLAAAKAAGMKCIVTKSSYTAEE--DFLNADAVFDCIGDPP 301
S + + AA+AAG ++ Y E D L D ++D + + P
Sbjct: 167 SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 1e-14
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 44/212 (20%)
Query: 79 ALLFDCDGVLVDTE------------KDGHRISFNDTFKEKELGVTWD--VDLYGELLKI 124
A +FD DG+L+D+E G IS + + LG+ D VDL+
Sbjct: 9 AAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDT-LGLRIDQVVDLW------ 61
Query: 125 GGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKL 184
+ + W PS +E ++ IA + + LIE+ PL PGV +
Sbjct: 62 ----------YARQPWN--GPSRQEVVQRIIARV--------ISLIEETR-PLLPGVREA 100
Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244
+ +G+K+ + S S + A+++ + + + + + +P KP P +Y A
Sbjct: 101 LALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALA--SAEKLPYSKPHPEVYLNCA 158
Query: 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
+ LGVDP +CV +EDS G+ AAKAA M+ IV
Sbjct: 159 AKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190
|
Length = 222 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 6e-14
Identities = 50/234 (21%), Positives = 82/234 (35%), Gaps = 35/234 (14%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
A+LFD DG L+D + R F E + T + LLK+ E++ A F
Sbjct: 4 IKAILFDLDGTLLDFDSAEFRAVL-AEFAEIGVPETLE---ELALLKL---IEKLEARF- 55
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE------KKLLPLRPGVAKLIDQALE 190
E ++ + L + + L+E KLLP P + + + +
Sbjct: 56 --LRGEYTGEYGLTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGK 113
Query: 191 KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-------QIFAGDVVPRKKPDPAIYTLA 243
K + +N + ++ +F + V KPDP I+ A
Sbjct: 114 KYKLGIL---TNGARPHQE-------RKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYA 163
Query: 244 ASTLGVDPSSCVVVEDS-TIGLAAAKAAGMK-CIVTKSSYTAEEDFLNADAVFD 295
LGV P + V DS + A+A GMK + + + D
Sbjct: 164 LEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS 217
|
Length = 229 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 5e-13
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL-- 288
KP+P + A LGVDP CV++ DS + AA+AAG++ I+ + T ED
Sbjct: 1 VCGKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERA 60
Query: 289 --NADAVFDCIGD 299
D V D + D
Sbjct: 61 PGRPDYVVDSLAD 73
|
Length = 74 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 7e-13
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 14/121 (11%)
Query: 169 LIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA--------------IVSFLL 214
+ E + L L PGV + + + EKG+K+A+ + + + V I S
Sbjct: 17 IAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGA 76
Query: 215 GPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC 274
++ G KP+P A LGVDP ++V DS + AKAAG
Sbjct: 77 AIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLG 136
Query: 275 I 275
+
Sbjct: 137 V 137
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 3e-11
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 44/236 (18%)
Query: 85 DGVLVDTEKDGHRISFNDTFKEKEL---GVTWDVDLYGELLKIGGGKERMTA---YFNKT 138
DG+L+DTEK F +EK L G T+D L +++ GK+ + A + ++
Sbjct: 2 DGLLLDTEK------FYTEVQEKILARYGKTFDWSLKAKMM----GKKAIEAARIFVEES 51
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
G SD + F+ +R+ L + L+P G +L+ KG+ +A+
Sbjct: 52 GL-----SDSLSPEDFLV---EREAMLQDLFPTSDLMP---GAERLVRHLHAKGIPIAIA 100
Query: 199 STSNEKAVTAIVSFLLGPERAEKI-----QIFAGD--VVPRKKPDPAIYTLAAS--TLG- 248
+ S+++ F L +R ++ + GD V + KP P I+ AA G
Sbjct: 101 TGSHKRH------FDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD-PPEE 303
VDP +V ED+ G+ AAK AGM ++ + AD V + D PEE
Sbjct: 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEE 210
|
Length = 220 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 9e-11
Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 33/194 (17%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DG LVD K R +F TF+E + + L + G E +
Sbjct: 1 AILFDIDGTLVDI-KFAIRRAFAQTFEE----FGLNPAAFKRLKALRGLAEEL------- 48
Query: 139 GWPEKAPS-DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
A EE + + PG A L+ + E G+K+ +
Sbjct: 49 -LWRIATEALEELQGHIGYDAEE---------------AYIPGAADLLPRLKEAGIKLGI 92
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
S + +A ++ + ++ G KP+P I+ A +LGV P + V
Sbjct: 93 ISNGSLRAQKLLLRKHGLGDY---FELILGSDEIGSKPEPEIFLAALESLGVPP-EVLHV 148
Query: 258 EDSTIGLAAAKAAG 271
D+ + A+ AG
Sbjct: 149 GDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 6e-10
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
LP ++FD DG LVD+ D L D + EL + G E + +
Sbjct: 12 LPRLVMFDLDGTLVDSVPD--------------LAAAVD-RMLLELGRPPAGLEAVRHWV 56
Query: 136 NKTGWP---EKAPSDEEERKQFIASLHKRKTELFMVLIEKK--LLPLRPGVAKLIDQALE 190
G P +A + + L ++ LFM L + PGV + +
Sbjct: 57 G-NGAPVLVRRALAGSIDHDGVDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKK 115
Query: 191 KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFAGDVVPRKKPDPAIYTLAAS 245
+GV++A+ + E+ V ++ + KI I GD +P+KKPDPA
Sbjct: 116 QGVEMALITNKPERFVAPLLDQM-------KIGRYFRWIIGGDTLPQKKPDPAALLFVMK 168
Query: 246 TLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281
GV PS + V DS + AAKAAG++C+ Y
Sbjct: 169 MAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGY 204
|
Length = 272 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-10
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 224 IFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGM 272
+ A D V KP P + A +GV P+ CVV ED+ G+ AA+AAGM
Sbjct: 132 VVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGM 180
|
Length = 188 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 8e-09
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTS----NEKAVT 207
+ L RK +L+ + + L LRPG + + QAL+K + +AV ST E+A+
Sbjct: 87 LQMKRLAIRKEDLYEYM-QGGLYRLRPGSREFV-QALKKHEIPIAVASTRPRRYLERAIE 144
Query: 208 AIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAA 267
A+ G E + + A DV R KPDP ++ AA LG P C+V +S + AA
Sbjct: 145 AV-----GMEGFFSVVLAAEDVY-RGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAA 198
Query: 268 KAAGMKCIVTKSSYTAEE 285
MKC+ + E
Sbjct: 199 HDGCMKCVAVAGKHPVYE 216
|
Length = 260 |
| >gnl|CDD|233800 TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-08
Identities = 39/135 (28%), Positives = 47/135 (34%), Gaps = 20/135 (14%)
Query: 166 FMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE----- 220
L+ + LRP + I KG K A C T+N F E
Sbjct: 84 VFPLLYGENTKLRPSMMAAIKTLRAKGFKTA-CITNN---------FPTDHSAEEALLPG 133
Query: 221 KIQIFAGDVVPR-----KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI 275
I VV +KPDP IY L LGV P CV ++D L A A G+ I
Sbjct: 134 DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTI 193
Query: 276 VTKSSYTAEEDFLNA 290
A D A
Sbjct: 194 KVSDEEQAIHDLEKA 208
|
This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. Length = 211 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 3e-08
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 51/210 (24%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK-IGGGK-----ERMT 132
A+ FDCDG LVD+E R F E G+T ++ E+ K G K + ++
Sbjct: 6 AVFFDCDGTLVDSEVICSRAYVT-MFAE--FGITLSLE---EVFKRFKGVKLYEIIDIIS 59
Query: 133 AYFNKTGWPEKAPSDEEERKQFIASLHKRK--TELFMVLIEKKLLPLRPGVAKLIDQALE 190
T E E R LF + +L P+ G L++
Sbjct: 60 KEHGVT-----LAKAELEP-------VYRAEVARLF----DSELEPI-AGANALLES--- 99
Query: 191 KGVKVAVCSTSN--------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTL 242
+ V +C SN T ++ + P++ +F+G + R KPDPA+
Sbjct: 100 --ITVPMCVVSNGPVSKMQHSLGKTGMLHYF--PDK-----LFSGYDIQRWKPDPALMFH 150
Query: 243 AASTLGVDPSSCVVVEDSTIGLAAAKAAGM 272
AA + V+ +C++V+DS+ G + AAGM
Sbjct: 151 AAEAMNVNVENCILVDDSSAGAQSGIAAGM 180
|
Length = 221 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
V R KP+P Y L A LG+ P CVVVED+ G+ + AAG I
Sbjct: 134 VKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA 180
|
Length = 218 |
| >gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 43/209 (20%), Positives = 70/209 (33%), Gaps = 34/209 (16%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW--DVDLYGELLKIGG-------- 126
AL+FD G L D R + + + L W Y L + G
Sbjct: 1 IKALVFDVYGTLFDVHSVVERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDL 60
Query: 127 GKE--RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKL 184
+E R + +++E + LP P V
Sbjct: 61 TREALRYLL--------GRLGLEDDES------------AADRLAEAYLRLPPHPDVPAG 100
Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244
+ E+G ++A+ S + + ++V + + + + D V KP P +Y LA
Sbjct: 101 LRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV--LSADAVRAYKPAPQVYQLAL 158
Query: 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMK 273
LGV P + V + L AK G K
Sbjct: 159 EALGVPPDEVLFVASNPWDLGGAKKFGFK 187
|
Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 35/222 (15%)
Query: 79 ALLFDCDGVLVDTEKDG--HRISFNDTFKEKELGVTWDVDLYGELLKI----GGGKERMT 132
A+ FD D L+DT R + + E L V ++ + Y ELLK+ G
Sbjct: 4 AIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFE-EAYEELLKLIKEYGSNYPTHF 62
Query: 133 AYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG 192
Y + W E P F+ + HK K V PGV + + E G
Sbjct: 63 DYLIRRLWEEYNPKLVAA---FVYAYHKLKFAYLRVY---------PGVRDTLMELRESG 110
Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDPAIYTLAASTLG 248
++ + + + ER F + +KP P I+ A LG
Sbjct: 111 YRLGIITDGLPVKQWEKL------ERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLG 164
Query: 249 VDPSSCVVVED---STIGLAAAKAAGMKCIVT-KSSYTAEED 286
V P V+V D I AK GMK + + + ED
Sbjct: 165 VKPEEAVMVGDRLDKDIK--GAKNLGMKTVWINQGKSSKMED 204
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 225 FAGDVVPRK--KPDPAIYTLAASTLGVDPSSCVVVEDSTIG-LAAAKAAGMKCI-VTKSS 280
A P KP PAIY A LG+D S ++V D + AKAAG+ + V
Sbjct: 179 QATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGV 238
Query: 281 YTAEE-DFLNA--DAVFDCIGDPPEERFDLA 308
+AE+ D V D + + +L
Sbjct: 239 SSAEDLDRAEVKPTYVVDSLAELITALKELV 269
|
Length = 269 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 179 PGVAKLIDQALEKGVKVAVCS-TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
PGV +L+ + GV A+ + S +A + + + L P I D VPR KP P
Sbjct: 78 PGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVI---GSDEVPRPKPAP 134
Query: 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCI 297
I A L V P V+V D+ LA+A+AAG + + L A D +
Sbjct: 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARP--DFL 192
Query: 298 GDPPEERFDL 307
P+ L
Sbjct: 193 LRKPQSLLAL 202
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 6e-06
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 18/215 (8%)
Query: 72 SASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM 131
+A P A+LFD DG L+D+ D + N + + L + G M
Sbjct: 7 AAVRFPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP---ITLAQLRPVVSKGARAM 62
Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK 191
A +PE D R I +R + LI + GV ++ Q LE
Sbjct: 63 LA----VAFPEL---DAAARDALIPEFLQR----YEALIGTQSQLF-DGVEGML-QRLEC 109
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251
V T+ + + ++ LG E+ + I GD + +KP P +AA +GV P
Sbjct: 110 AGCVWGIVTNKPEYLARLILPQLGWEQRCAVLI-GGDTLAERKPHPLPLLVAAERIGVAP 168
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
+ CV V D + AA+AAGM + Y +D
Sbjct: 169 TDCVYVGDDERDILAARAAGMPSVAALWGYRLHDD 203
|
Length = 229 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 9e-06
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV-TAIVSFLLGP 216
+ RK E++ L + + LR G + ++ + + +A+ ST K + AI S +G
Sbjct: 199 MATRKEEIYQAL-QGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS--IGI 255
Query: 217 ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
+ I A + V R KPDP ++ AA L P C+V +S + AA A MKC+
Sbjct: 256 RGFFSV-IVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVA 314
Query: 277 TKSSYTAEEDFLNA 290
S + E L A
Sbjct: 315 VASKHPIYE--LGA 326
|
Length = 381 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 22/234 (9%)
Query: 65 RNVRVTCSASVLP--SALLFDCDGVLVDTEKDGHRISFNDTFKEKEL--GVTWDVDLYGE 120
+V S S L A+LFD DG L D++ H +F + +E GV + + E
Sbjct: 8 NSVESKSSLSGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVE 66
Query: 121 LLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPG 180
+ ++ F P D E +F K LF L ++L PL G
Sbjct: 67 NIAGKHNEDIALGLF---------PDDLERGLKFTDD----KEALFRKLASEQLKPLN-G 112
Query: 181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIY 240
+ KL ++G+K A + + + ++S L + + + I G KP P Y
Sbjct: 113 LYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVII--GSECEHAKPHPDPY 170
Query: 241 TLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF 294
A L V V EDS G+ A AAGM +V ++ E + A F
Sbjct: 171 LKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP-VVGLTTRNPESLLMEAKPTF 223
|
Length = 248 |
| >gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD 236
PG ++I +G+K+ + + + +V+ + D VP +P
Sbjct: 100 PIPGAIEVIAYLRARGIKIGSTTGYT-REMMDVVAPEAAAQGYRPDYNVTADDVPAGRPA 158
Query: 237 PAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCI-VTKSSYTA---EEDFLNAD 291
P + A+ LGV DP++ V V D+ + + AGM + V SS EE++
Sbjct: 159 PWMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGVILSSNELGLSEEEYRALP 218
Query: 292 AV 293
Sbjct: 219 PA 220
|
This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253 |
| >gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK----IQIFAGDVVPRKK 234
PGV ++I +G+K+ T + + +V P A + + D VP +
Sbjct: 104 PGVLEVIAALRARGIKIGST-TGYTREMMDVVV----PLAAAQGYRPDHVVTTDDVPAGR 158
Query: 235 PDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCI-VTKSS----YTAEEDFL 288
P P + A LGV D ++CV V+D+ G+ AGM + V S + EE++
Sbjct: 159 PYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLS-EEEYQ 217
Query: 289 NADA 292
A
Sbjct: 218 ALSA 221
|
Length = 267 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
KP P Y A GVDP + +DS +AA KA GMK ++
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVL 182
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.001
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT---KSSYTAEEDFLNA 290
KP P + A L +D + +V DS L AA AAG+ ++ K T E
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPG 162
Query: 291 DAVFDCIGDPPEE 303
V D + D P+
Sbjct: 163 TWVLDSLADLPQA 175
|
Length = 181 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 38/196 (19%), Positives = 61/196 (31%), Gaps = 43/196 (21%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
+FD DG L++ +D +G +T
Sbjct: 5 KKLAVFDLDGTLINA---------------------ELIDELARGAGVGEEVLAIT---- 39
Query: 137 KTGWPEKAPSDE---EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
E+A E EE + +L K + + ++ L L PG +L+ G
Sbjct: 40 -----ERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAGA 94
Query: 194 KVAVCSTSNEKAVTAI-----VSFLLGPERAEKIQIFAGDV----VPRKKPDPAIYTLAA 244
KV + S V I + +++ E G V + A+ LAA
Sbjct: 95 KVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154
Query: 245 STLGVDPSSCVVVEDS 260
LG+ V DS
Sbjct: 155 E-LGIPLEETVAYGDS 169
|
Length = 212 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 47/205 (22%), Positives = 71/205 (34%), Gaps = 42/205 (20%)
Query: 79 ALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGVTWDVDLYG--ELLKIGGGKERMTAY 134
+LFD DG L++T + I SF T K Y ++L G +
Sbjct: 5 TVLFDLDGTLINTNE---LIISSFLHTLKTYYPNQ------YKREDVLPFIG--PSLHDT 53
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
F+K K EE + H+ EL + V + + ++G K
Sbjct: 54 FSKID-ESKV---EEMITTYREFNHEHHDEL---------VTEYETVYETLKTLKKQGYK 100
Query: 195 VAVCSTSNEKAV------TAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248
+ + +T V T + F + D V KPDP A LG
Sbjct: 101 LGIVTTKMRDTVEMGLKLTGLDEFF--------DVVITLDDVEHAKPDPEPVLKALELLG 152
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGMK 273
P ++V D+ + A K AG K
Sbjct: 153 AKPEEALMVGDNHHDILAGKNAGTK 177
|
Length = 214 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.98 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.98 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.97 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.97 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.97 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PLN02940 | 382 | riboflavin kinase | 99.97 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.96 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.95 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.95 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.95 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.95 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.94 | |
| PLN02811 | 220 | hydrolase | 99.94 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.94 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.93 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.92 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.92 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.92 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.92 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.92 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.91 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.9 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.89 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.89 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.89 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.89 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.88 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.87 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.87 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.86 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.84 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.84 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.84 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.83 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.83 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.83 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.8 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.8 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.78 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.77 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.77 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.76 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.75 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.75 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.73 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.72 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.72 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.71 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.71 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.71 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.69 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.69 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.69 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.68 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.67 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.67 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.67 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.66 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.65 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.63 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.62 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.6 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.56 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.56 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.54 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.54 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.54 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.53 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.53 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.5 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.5 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.5 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.5 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.48 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.46 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.44 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.43 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.41 | |
| PLN02887 | 580 | hydrolase family protein | 99.37 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.35 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.34 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.34 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.33 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.32 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.31 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.31 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.29 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.28 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.25 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.24 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.23 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.2 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.2 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.19 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.18 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.16 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.16 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.13 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.12 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.12 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.1 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.05 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.05 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.01 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.01 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.99 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.98 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.93 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.88 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.87 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.87 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.86 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.85 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.83 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.77 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.74 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.65 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.63 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.63 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.59 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.59 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.5 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.46 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.42 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.4 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.39 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.35 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.34 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.32 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.31 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.29 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.25 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.24 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.24 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.21 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.15 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.13 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.1 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.08 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.08 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.07 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.07 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.05 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.05 | |
| PLN02423 | 245 | phosphomannomutase | 98.02 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.02 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.99 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.96 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.92 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.88 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.85 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.85 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.82 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.76 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.71 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.69 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 97.63 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.56 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.49 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.48 | |
| PLN02151 | 354 | trehalose-phosphatase | 97.47 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.47 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.43 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.41 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.41 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.37 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.33 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 97.31 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.27 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 97.23 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.21 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 97.17 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.11 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.01 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 96.99 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.87 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 96.7 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 96.67 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.66 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.64 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 96.35 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 96.25 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 96.23 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 96.03 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.95 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.9 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 95.68 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 95.57 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 95.19 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 95.13 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 94.97 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.95 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 94.12 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 93.85 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.62 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 92.22 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 91.58 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.39 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 91.12 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 90.46 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 90.35 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 90.16 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 90.11 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 89.68 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 89.48 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 89.46 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 89.1 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 88.91 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 88.45 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 88.28 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 88.1 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 88.04 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 88.0 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 87.97 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 87.29 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 87.26 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 86.93 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 86.72 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 86.62 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 86.25 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 86.24 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 85.96 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 85.38 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.25 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 85.22 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 85.17 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 84.35 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 84.14 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.44 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 83.03 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 82.23 | |
| PRK05406 | 246 | LamB/YcsF family protein; Provisional | 80.34 |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=273.20 Aligned_cols=242 Identities=74% Similarity=1.190 Sum_probs=195.4
Q ss_pred CCceEEEEeCCCccccCC-ccchHHHHHHHHHHcCC-CCCCchhHHHHHHHhcCcHHHHHHHHhhcCCC----CCCCCCH
Q 020874 75 VLPSALLFDCDGVLVDTE-KDGHRISFNDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSDE 148 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~-~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~ 148 (320)
..+++|||||||||+|+. . .+..+|.++++++|+ ...++.+.+..+...|.+...+..++...+++ ...+..+
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~-~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERD-GHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccH-HHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccc
Confidence 457999999999999999 6 578899999999998 43445554544444777777777766655554 1122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC
Q 020874 149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD 228 (320)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d 228 (320)
+..++.++.+.+...+.|.+.+....+.++||+.++|+.|+++|++++|+||++...+...++.+++..+++...+++++
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~ 196 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGD 196 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecc
Confidence 44445555555555566666655444689999999999999999999999999999999888877544555544455788
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
+++..||+|++|..+++++|++|++++||||+.+|+++|+++|+.+|++.+|+...+.+..++++++++.|+...-++++
T Consensus 197 ~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~ 276 (286)
T PLN02779 197 DVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLL 276 (286)
T ss_pred ccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhHHH
Confidence 88899999999999999999999999999999999999999999999999988776667789999999999999999999
Q ss_pred hcccccccc
Q 020874 309 FCGSLLQKQ 317 (320)
Q Consensus 309 ~~~~~~~~~ 317 (320)
||+++|.||
T Consensus 277 ~~~~~~~~~ 285 (286)
T PLN02779 277 FCESLLTKQ 285 (286)
T ss_pred HHHHHhhcc
Confidence 999999987
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=230.04 Aligned_cols=215 Identities=29% Similarity=0.416 Sum_probs=169.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++++|+||+||||+|+... +..+++.+++.++... .+.+.+... .|.+...+...+.... ......+.
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--ig~~~~~~~~~~~~~~-------~~~~~~~~ 70 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP-LDEEEIRQL--IGLGLDELIERLLGEA-------DEEAAAEL 70 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC-CCHHHHHHH--hcCCHHHHHHHHhccc-------cchhHHHH
Confidence 56899999999999999985 7778999999999884 344444444 5555554444322210 11111134
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
++.+.+...+.+.+.. ...++||+.++|+.|+++|++++|+||++...++..++++++..+|+ .++++++....|
T Consensus 71 ~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~~~~K 145 (220)
T COG0546 71 VERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDVPPPK 145 (220)
T ss_pred HHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCCCCCC
Confidence 4444444444433322 25789999999999999999999999999999999999999999999 788888889999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~ 305 (320)
|+|..+..+++++|++|++++||||+.+|+++|++||+.+|+|.||+...+.+ .++|++++++.||...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 99999999999999998899999999999999999999999999998633333 569999999999887664
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=245.21 Aligned_cols=217 Identities=20% Similarity=0.249 Sum_probs=169.6
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
..++|||||||||+|+...++..+|..+++++|.... ..+.+..+ .|.+.......+.... ......+++.
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~-~~e~~~~~--~G~~~~~~l~~ll~~~------~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPP-PAFILRRV--EGMKNEQAISEVLCWS------RDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCC-HHHHHHHh--cCCCHHHHHHHHhhcc------CCHHHHHHHH
Confidence 3569999999999999875577799999999998743 22223332 5666555544332111 1233333333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
.. +.+.|.+... ....++||+.++|+.|+++|++++|+||+....++..++.+++..+|+ .+++++++..+||
T Consensus 201 ~~----~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd--~Iv~sddv~~~KP 273 (381)
T PLN02575 201 TR----KEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS--VIVAAEDVYRGKP 273 (381)
T ss_pred HH----HHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce--EEEecCcCCCCCC
Confidence 33 3333333332 236789999999999999999999999999999999999999999999 8999999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhhh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAF 309 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~~ 309 (320)
+|++|..+++++|+.|++|+||||+..|+++|+++||.+|++.+++ ....+..++++++++.||....++.++
T Consensus 274 ~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~-~~~~l~~Ad~iI~s~~EL~~~~l~~l~ 346 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PIYELGAADLVVRRLDELSIVDLKNLA 346 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCC-ChhHhcCCCEEECCHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999998764 333456799999999999777776664
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=230.26 Aligned_cols=212 Identities=25% Similarity=0.331 Sum_probs=162.8
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
..|+|+|+||+||||+|+... +..++..+++++|.+. .+.+.+... .|.+.+.+...+... ......++
T Consensus 9 ~~~~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~-~~~~~~~~~--~g~~~~~~~~~~~~~-------~~~~~~~~ 77 (229)
T PRK13226 9 VRFPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP-ITLAQLRPV--VSKGARAMLAVAFPE-------LDAAARDA 77 (229)
T ss_pred cccCCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hhhHHHHHHHHHhcc-------CChHHHHH
Confidence 366799999999999999984 8889999999999863 344444333 444444433322111 12233334
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
+.+.+.+.+. +.... ..+++||+.++|+.|+++|++++++||++...+...++.+++..+|+ .++++++++..
T Consensus 78 ~~~~~~~~~~----~~~~~-~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~ 150 (229)
T PRK13226 78 LIPEFLQRYE----ALIGT-QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--VLIGGDTLAER 150 (229)
T ss_pred HHHHHHHHHH----Hhhhh-cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--EEEecCcCCCC
Confidence 4444333322 22221 26889999999999999999999999999998999999998888887 77888888899
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc-ccc--cCCCeeccCCCCChhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE-EDF--LNADAVFDCIGDPPEE 303 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~-~~~--~~a~~vi~~l~el~~~ 303 (320)
||+|++|.++++++|++|++++||||+.+|+++|+++|+.+|++.||+... +.. .+++++++++.||.+.
T Consensus 151 KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 151 KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999998633 222 4699999998887654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=235.06 Aligned_cols=216 Identities=20% Similarity=0.264 Sum_probs=167.2
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
.+|+|||||||||+|+...++..+|.++++++|+.... .+.+... .|.+.......+.... ...+...++.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~-~e~~~~~--~G~~~~~~~~~l~~~~------~~~~~~~~l~ 93 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP-AFLLKRA--EGMKNEQAISEVLCWS------RDFLQMKRLA 93 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH-HHHHHHh--cCCCHHHHHHHHhccC------CCHHHHHHHH
Confidence 35699999999999997545778999999999987442 2222222 5666555544432110 1222233332
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
.. ....+. ........++||+.++|+.|+++|++++|+||+....+...++++++..+|+ .+++++++..+||
T Consensus 94 ~~----~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~ii~~~d~~~~KP 166 (260)
T PLN03243 94 IR----KEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS--VVLAAEDVYRGKP 166 (260)
T ss_pred HH----HHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc--EEEecccCCCCCC
Confidence 22 222221 2222347789999999999999999999999999999999999999888998 8999999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
+|++|..+++++|+.|++++||||+..|+++|+++||.+|++. ++.....+..++++++++.|+....++-+
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~el~~~~~~~~ 238 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDDLSVVDLKNL 238 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999997 55555566779999999999988777655
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=232.68 Aligned_cols=210 Identities=24% Similarity=0.308 Sum_probs=160.1
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCC--CCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG--VTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK 152 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (320)
.++++|+|||||||+|+.. .+..+|.++++++|.. .....+.+... ..|.+...+...+... ..+...
T Consensus 20 ~~~k~viFDlDGTLiDs~~-~~~~a~~~~~~~~g~~~g~~~~~~~~~~~-~~G~~~~~~~~~~~~~--------~~~~~~ 89 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDP-LHYYAFREMLQEINFNGGVPITEEFFVEN-IAGKHNEDIALGLFPD--------DLERGL 89 (248)
T ss_pred CccCEEEEcCCCccCcCHH-HHHHHHHHHHHHhccccCCCCCHHHHHHH-cCCCCHHHHHHHHcCc--------chhhHH
Confidence 5689999999999999997 4788999999998754 22333322211 1455555443322111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
++ .....+.|.+... ....++||+.++|+.|+++|++++|+||+....++..++.+++..+|+ .++++++++.
T Consensus 90 ~~----~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~iv~~~~~~~ 162 (248)
T PLN02770 90 KF----TDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ--AVIIGSECEH 162 (248)
T ss_pred HH----HHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc--EEEecCcCCC
Confidence 11 1222233333222 237889999999999999999999999999999999999999999998 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCeeccCCCCCh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAVFDCIGDPP 301 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~vi~~l~el~ 301 (320)
+||+|++|..+++++|++|++++||||+..|+++|+++|+.+|++.+++...... ..++++++++.|+.
T Consensus 163 ~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 163 AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 9999999999999999999999999999999999999999999999886433222 47999999999943
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=228.47 Aligned_cols=209 Identities=22% Similarity=0.216 Sum_probs=163.5
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++++|+||+||||+|+.. .+..+|.+++++++... .+.+.+... .|.+.......+ .+...+.+.
T Consensus 2 ~~~~viFD~DGTL~ds~~-~~~~a~~~~~~~~~~~~-~~~~~~~~~--~G~~~~~~~~~~-----------~~~~~~~~~ 66 (214)
T PRK13288 2 KINTVLFDLDGTLINTNE-LIISSFLHTLKTYYPNQ-YKREDVLPF--IGPSLHDTFSKI-----------DESKVEEMI 66 (214)
T ss_pred CccEEEEeCCCcCccCHH-HHHHHHHHHHHHhCCCC-CCHHHHHHH--hCcCHHHHHHhc-----------CHHHHHHHH
Confidence 579999999999999997 47889999999987642 233333333 455544333221 122223333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+.. .+..... ....++||+.++|+.|+++|++++|+||+....+...++.+++..+|+ .+++++++...||
T Consensus 67 ~~~~~----~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp 139 (214)
T PRK13288 67 TTYRE----FNHEHHD-ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD--VVITLDDVEHAKP 139 (214)
T ss_pred HHHHH----HHHHhhh-hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee--EEEecCcCCCCCC
Confidence 32222 2221111 226789999999999999999999999999999999999999999998 8899999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~ 306 (320)
+|+.|+++++++|++|++++||||+.+|+++|+++|+.+|++.|+....+.+ .+++++++++.|+.+.+.+
T Consensus 140 ~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 140 DPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred CcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987665443 4699999999998886644
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=228.97 Aligned_cols=213 Identities=20% Similarity=0.249 Sum_probs=158.7
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-----------HHhhcCCCCCCC
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-----------YFNKTGWPEKAP 145 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~ 145 (320)
+++|+||+||||+|+....+..+|.++++++|.+. +.+.+... .|.+...... +....+. .
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 73 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQI--TLEEARGP--MGLGKWDHIRALLKMPAVAERWRAKFGR----L 73 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCc--cHHHHHHh--cCccHHHHHHHHhcCHHHHHHHHHHhCC----C
Confidence 68999999999999865335678999999988753 33333322 4444322211 1122221 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-cceeE
Q 020874 146 SDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQI 224 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~~~i 224 (320)
...+...++...+.. .+.+.... ...++||+.++|+.|+++|++++|+||+....++.+++.+++..+| + .+
T Consensus 74 ~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d--~i 146 (253)
T TIGR01422 74 PTEADIEAIYEAFEP----LQLAKLAE-YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPD--YN 146 (253)
T ss_pred CCHHHHHHHHHHHHH----HHHHHHHh-cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCc--eE
Confidence 123333333333332 22222222 2788999999999999999999999999999999999999888875 5 78
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC--------------------
Q 020874 225 FAGDVVPRKKPDPAIYTLAASTLGVD-PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA-------------------- 283 (320)
Q Consensus 225 ~~~d~~~~~KP~~~~~~~~~~~~g~~-~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~-------------------- 283 (320)
+++++++..||+|++|..+++++|+. |++++||||+.+|+++|+++|+.+|+|.+|+..
T Consensus 147 i~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 226 (253)
T TIGR01422 147 VTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARR 226 (253)
T ss_pred EccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHH
Confidence 89999999999999999999999995 999999999999999999999999999998762
Q ss_pred ---cccc--cCCCeeccCCCCChhhH
Q 020874 284 ---EEDF--LNADAVFDCIGDPPEER 304 (320)
Q Consensus 284 ---~~~~--~~a~~vi~~l~el~~~l 304 (320)
...+ .++|++++++.|+...+
T Consensus 227 ~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 227 AEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 1233 46999999999987643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.5e-31 Score=229.66 Aligned_cols=217 Identities=21% Similarity=0.283 Sum_probs=160.2
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHH---------H-hhcCCCC
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAY---------F-NKTGWPE 142 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~---------~-~~~~~~~ 142 (320)
|+++|+||||+||||+|+....+..+|.++++++|.+. +.+.+... .|.+... +... + ...+.
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~g~-- 74 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEI--TLEEARGP--MGLGKWDHIRALLKMPRVAARWQAVFGR-- 74 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHhcHHHHHHHHHHhCC--
Confidence 46789999999999999865334678999999988753 33333222 4433322 1111 1 11221
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-cc
Q 020874 143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK 221 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~ 221 (320)
....+...++...+... +.+.+. ....++||+.++|+.|+++|++++|+||+....+...++.++...++ +
T Consensus 75 --~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d- 146 (267)
T PRK13478 75 --LPTEADVDALYAAFEPL----QIAKLA-DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD- 146 (267)
T ss_pred --CCCHHHHHHHHHHHHHH----HHHHHh-hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce-
Confidence 11233333333333322 222222 22688999999999999999999999999999999999988776665 5
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC-----------------
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVD-PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA----------------- 283 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~-~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~----------------- 283 (320)
.++++++++..||+|++|..+++++|+. +++++||||+.+|+++|+++|+.+|+|.+|+..
T Consensus 147 -~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 147 -HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred -EEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 7888999899999999999999999996 699999999999999999999999999998763
Q ss_pred ------cccc--cCCCeeccCCCCChhhHH
Q 020874 284 ------EEDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 284 ------~~~~--~~a~~vi~~l~el~~~l~ 305 (320)
.+.+ .+++++++++.|+.+.+.
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~ 255 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIA 255 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHH
Confidence 1222 479999999999987664
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=221.95 Aligned_cols=211 Identities=19% Similarity=0.213 Sum_probs=162.5
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
+|+|+||+||||+|+... +..++.++++++|.... ...+... ..|.....+.+ ++...+. .....+++.
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~------~~~~~~~~~ 70 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLSPT--PEEVQSA-WMGQSKIEAIRALLALDGA------DEAEAQAAF 70 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCCCC--HHHHHHh-hcCCCHHHHHHHHHhccCC------CHHHHHHHH
Confidence 579999999999999984 88899999999887643 2223221 24555444433 3333332 122233333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc--ccccceeEEeCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~--~~~~~~~i~~~d~~~~~ 233 (320)
..+ .+.+.+.+.....+++||+.++|+.|+++|++++++||+....+...++.+++. .+|+ .+++++++...
T Consensus 71 ~~~----~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~--~i~~~~~~~~~ 144 (220)
T TIGR03351 71 ADF----EERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD--AVVCPSDVAAG 144 (220)
T ss_pred HHH----HHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC--EEEcCCcCCCC
Confidence 333 333333333334689999999999999999999999999999999999999877 7888 88999998899
Q ss_pred CCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccc--cCCCeeccCCCCChhh
Q 020874 234 KPDPAIYTLAASTLGVD-PSSCVVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDF--LNADAVFDCIGDPPEE 303 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~-~~~~v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~--~~a~~vi~~l~el~~~ 303 (320)
||+|++|..+++++|+. |++++||||+.+|+++|+++|+.+ |++.+|......+ ..++++++++.|+...
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 99999999999999997 799999999999999999999999 9998887665544 3689999998877653
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-31 Score=221.82 Aligned_cols=208 Identities=24% Similarity=0.366 Sum_probs=159.3
Q ss_pred EEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHHHHHHH
Q 020874 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFIASL 158 (320)
Q Consensus 80 viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (320)
||||+||||+|+... +..++..+++++|... .+.+.+... .|.+...+.+ ++...+. ....+...++...
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~- 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP-ATLARVIGF--IGNGVPVLMERVLAWAGQ----EPDAQRVAELRKL- 71 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hcccHHHHHHHHhhcccc----ccChHHHHHHHHH-
Confidence 699999999999874 6778999999998763 334434333 4555443333 3332221 1122223333332
Q ss_pred HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHH
Q 020874 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPA 238 (320)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~ 238 (320)
+.+.|.+...+ ...++||+.++|+.|+++|++++|+||+....++..++++++..+|+ .++++++++..||+|+
T Consensus 72 ---~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~p~ 145 (213)
T TIGR01449 72 ---FDRHYEEVAGE-LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPD 145 (213)
T ss_pred ---HHHHHHHhccc-cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc--EEEecCCCCCCCCChH
Confidence 23333332221 36789999999999999999999999999999999999999888888 7888998899999999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChh
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPE 302 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~ 302 (320)
+|..+++++|++|++++||||+.+|+++|+++|+++|++.+|+...+.+ ..++++++++.|+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 9999999999999999999999999999999999999999987654443 469999999988765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=220.28 Aligned_cols=204 Identities=23% Similarity=0.298 Sum_probs=151.6
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++++|+|||||||+|+... +..+|.++++++|++. ..+... ..|.+.....+.+.. + ...+...
T Consensus 2 ~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~-~~g~~~~~~~~~~~~-~------~~~~~~~--- 65 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNF-IHGKQAITSLRHFMA-G------ASEAEIQ--- 65 (218)
T ss_pred CCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHH-HcCCCHHHHHHHHhc-c------CCcHHHH---
Confidence 5799999999999999874 7889999999999753 122221 135555444333321 1 1112111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
+.+... ..+.... .....++||+.++|+.|+++|++++++||+....+...++..+. .+++ .+++++++...||
T Consensus 66 ~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~--~i~~~~~~~~~KP 139 (218)
T PRK11587 66 AEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPE--VFVTAERVKRGKP 139 (218)
T ss_pred HHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCcc--EEEEHHHhcCCCC
Confidence 111110 0111111 12368899999999999999999999999988877778887765 4455 6888888888999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+|+.|..+++++|+.|++++||||+..|+++|+++|+.+|++.++... .....++++++++.|+..
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el~~ 205 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQLTV 205 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhheeE
Confidence 999999999999999999999999999999999999999999877543 334579999999999754
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=218.42 Aligned_cols=212 Identities=25% Similarity=0.423 Sum_probs=161.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHH-hhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 153 (320)
.++++|+||+||||+|+... +..++.++++++|..... ...+... .|.......+.+ ...++.. .. ..+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~---~~---~~~ 74 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-REELPDT--LGLRIDQVVDLWYARQPWNG---PS---RQE 74 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCCCH-HHHHHHh--hCCCHHHHHHHHHHhcCCCC---CC---HHH
Confidence 46899999999999999874 778899999999876432 1222222 454444443333 2222210 01 112
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
+...+.+. +.+... ....++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++++++++.+
T Consensus 75 ~~~~~~~~----~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 147 (222)
T PRK10826 75 VVQRIIAR----VISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKLPYS 147 (222)
T ss_pred HHHHHHHH----HHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccCCCC
Confidence 22222222 222212 226899999999999999999999999999999999999999999998 78899999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc-cccCCCeeccCCCCChhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE-DFLNADAVFDCIGDPPEE 303 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~-~~~~a~~vi~~l~el~~~ 303 (320)
||+|++|+.+++++|+.|++++||||+.+|+++|+++|+++|++.++....+ ....+++++.++.|+...
T Consensus 148 Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~ 218 (222)
T PRK10826 148 KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAA 218 (222)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhh
Confidence 9999999999999999999999999999999999999999999998766543 335689999999998653
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=214.86 Aligned_cols=200 Identities=25% Similarity=0.308 Sum_probs=155.6
Q ss_pred EEEeCCCccccCCccchHHHHHHHHHHc-CCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHH
Q 020874 80 LLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL 158 (320)
Q Consensus 80 viFDlDGTL~d~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (320)
|+|||||||+|+.. .+..++.++++++ +.+ ..+.+.+... .|...+.+.+. .+.. ......+
T Consensus 1 iiFDlDGTL~Ds~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~g~~~~~~~~~---~~~~------~~~~~~~---- 63 (205)
T TIGR01454 1 VVFDLDGVLVDSFA-VMREAFAIAYREVVGDG-PAPFEEYRRH--LGRYFPDIMRI---MGLP------LEMEEPF---- 63 (205)
T ss_pred CeecCcCccccCHH-HHHHHHHHHHHHhcCCC-CCCHHHHHHH--hCccHHHHHHH---cCCC------HHHHHHH----
Confidence 69999999999998 4888999999874 654 2344444433 45554444332 2221 1111111
Q ss_pred HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHH
Q 020874 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPA 238 (320)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~ 238 (320)
..... .. .....++||+.++|+.|+++|++++++||+....+...++.+++..+|+ .+++++++..+||+|+
T Consensus 64 ~~~~~----~~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~ 135 (205)
T TIGR01454 64 VRESY----RL--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD--HVIGSDEVPRPKPAPD 135 (205)
T ss_pred HHHHH----Hh--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee--eEEecCcCCCCCCChH
Confidence 11111 11 1237899999999999999999999999999999999999998888888 7888888889999999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhH
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEER 304 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l 304 (320)
+|+.+++++|+++++++||||+.+|+.+|+++|+++|++.||+.....+ ..++++++++.|+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999998776554 46999999998876543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=221.52 Aligned_cols=218 Identities=24% Similarity=0.327 Sum_probs=163.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
.++|+|+|||||||+|+... +..++..+++++|.... ..+.+... .|.+...+...+-...+. .........+++
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 85 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPPA-GLEAVRHW--VGNGAPVLVRRALAGSID-HDGVDDELAEQA 85 (272)
T ss_pred ccCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hChhHHHHHHHHhccccc-ccCCCHHHHHHH
Confidence 56899999999999999984 78899999999988643 22323222 455544433322111010 001122333333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.+.+.+ .+.... ....++||+.++|+.|+++|++++++||++...+...++++++..+|+ .++++++++..|
T Consensus 86 ~~~~~~----~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~--~i~~~d~~~~~K 157 (272)
T PRK13223 86 LALFME----AYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR--WIIGGDTLPQKK 157 (272)
T ss_pred HHHHHH----HHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe--EEEecCCCCCCC
Confidence 333222 222211 125789999999999999999999999999999999999988888888 788999888999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~ 305 (320)
|+|++|+.+++++|+++++++||||+.+|+++|+++|+++++|.+|+...+.+ ..++++++++.||.+.+.
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987765544 479999999988875543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=221.24 Aligned_cols=210 Identities=17% Similarity=0.214 Sum_probs=161.3
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
..+++|+|||||||+|+... +..++.++++++|.+. .+.+.+..+ .|.....+.+ ..++ ..+..+++
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~-~~~~~~~~~--~g~~~~~i~~---~~~~------~~~~~~~~ 126 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP-IDERDYAQL--RQWSSRTIVR---RAGL------SPWQQARL 126 (273)
T ss_pred hhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hCccHHHHHH---HcCC------CHHHHHHH
Confidence 35789999999999999874 7778999999998863 234444433 4444443333 2222 22333333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.+.+.+ .+.+.. ...+++||+.++|+.|+++|++++|+||+....+..+++.+++..+|+ .+++++.+ +
T Consensus 127 ~~~~~~----~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~~---~ 195 (273)
T PRK13225 127 LQRVQR----QLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTPI---L 195 (273)
T ss_pred HHHHHH----HHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCCC---C
Confidence 333322 222222 226889999999999999999999999999999999999999888888 66666654 3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~~ 308 (320)
++++.|..+++++|++|++++||||+.+|+++|+++|+.+|++.+|+.....+ ..++++++++.||.+.+.+++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~ 271 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLM 271 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999998776544 479999999999998776554
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-29 Score=212.45 Aligned_cols=124 Identities=20% Similarity=0.287 Sum_probs=112.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||++...+...++.+++..+|+ .++++++++..||+|++|+.+++++|++++++
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD--AVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc--EEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 6899999999999999999999999999989999999999888998 78999999999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCccc---ccCCCeeccCCCCC
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEED---FLNADAVFDCIGDP 300 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~---~~~a~~vi~~l~el 300 (320)
|||||+. +|+.+|+++|+.+|++.++...... ...++++++++.|+
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999998 8999999999999999987654422 24588999988775
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=214.94 Aligned_cols=190 Identities=36% Similarity=0.506 Sum_probs=144.7
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++++|||||||||+|++. .+..+|.++++++|+.... +..... .|.........+........ +......+..
T Consensus 1 ~~~avIFD~DGvLvDse~-~~~~a~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 73 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEP-LHARAWLEALKEYGIEISD--EEIREL--HGGGIARIIDLLRKLAAGED-PADLAELERL- 73 (221)
T ss_pred CCcEEEEcCCCCcCcchH-HHHHHHHHHHHHcCCCCCH--HHHHHH--HCCChHHHHHHHHHHhcCCc-ccCHHHHHHH-
Confidence 468999999999999998 5899999999999987542 223322 44433333333333211100 0011111111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+.+... ....++.||+.++|+.|+++|++++++|+..+..++..|+.+++.++|+ .+++++++..+||
T Consensus 74 ------~~~~~~~~--~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv~~~KP 143 (221)
T COG0637 74 ------LYEAEALE--LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDVARGKP 143 (221)
T ss_pred ------HHHHHHhh--hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHHhcCCC
Confidence 11111111 1237899999999999999999999999999999999999999999999 8899999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
+|++|..+++++|++|++||+|+|+.+++++|++|||.+|++..++.
T Consensus 144 ~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 144 APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999999999999999999987444
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-29 Score=211.47 Aligned_cols=217 Identities=25% Similarity=0.311 Sum_probs=165.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (320)
.++++|+||+||||+|+... +..++..++++++.... +...+... .|.+...+.. .+...+ .....+..++
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~----~~~~~~~~~~ 75 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPPA-GEERVRTW--VGNGADVLVERALTWAG----REPDEELLEK 75 (226)
T ss_pred CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHH--hCccHHHHHHHHHhhcc----CCccHHHHHH
Confidence 56899999999999999874 67789999999887632 33333333 4444433332 222211 1122333333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
....+. +.+..... ....++||+.++|+.|++.|++++++||+....+..+++.++...+|+ .+++++.++..
T Consensus 76 ~~~~~~----~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 148 (226)
T PRK13222 76 LRELFD----RHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNK 148 (226)
T ss_pred HHHHHH----HHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc--EEEcCCCCCCC
Confidence 333332 22322221 126789999999999999999999999999999999999998888887 78888888899
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~ 306 (320)
||+|++|+.++++++++++++++|||+.+|+++|+++|+.+|++.+|....... ..++++++++.|+...+..
T Consensus 149 kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 149 KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987644333 4799999999999887754
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-29 Score=227.07 Aligned_cols=210 Identities=27% Similarity=0.344 Sum_probs=163.0
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
..+++|+||+||||+|+.. .+..++..+++++|... +.+..... .|.+... +..++...+.. .. .++
T Consensus 9 ~~ik~VIFDlDGTLvDt~~-~~~~a~~~~~~~~G~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~----~~---~~~ 76 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDG-IVSDVLKAFLVKYGKQW--DGREAQKI--VGKTPLEAAATVVEDYGLP----CS---TDE 76 (382)
T ss_pred ccCCEEEECCcCcCCcCHH-HHHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHHHhCCC----CC---HHH
Confidence 4589999999999999998 48889999999998753 33333332 4554443 34444444432 11 122
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHH-HhcCcccccceeEEeCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS-FLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~-~~~~~~~~~~~~i~~~d~~~~ 232 (320)
+...+.+. +.+.+. ...++||+.++|+.|+++|++++|+||+....+...++ .+++..+|+ .+++++++..
T Consensus 77 ~~~~~~~~----~~~~~~--~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd--~ii~~d~v~~ 148 (382)
T PLN02940 77 FNSEITPL----LSEQWC--NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS--VIVGGDEVEK 148 (382)
T ss_pred HHHHHHHH----HHHHHc--cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC--EEEehhhcCC
Confidence 22222222 222222 26789999999999999999999999999998888887 667788898 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
+||+|++|..+++++|+.|+++|||||+..|+++|+++|+.+|++.+++........++++++++.|+...-
T Consensus 149 ~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~ 220 (382)
T PLN02940 149 GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEK 220 (382)
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHH
Confidence 999999999999999999999999999999999999999999999988665545567999999999986544
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=210.45 Aligned_cols=212 Identities=13% Similarity=0.158 Sum_probs=148.9
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHH----
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER---- 151 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (320)
++|+|+||+||||+|.. ...++.++++.+|+... .+.+..+...+.+ +...+.... ......
T Consensus 2 ~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~ 67 (224)
T PRK09449 2 KYDWILFDADETLFHFD---AFAGLQRMFSRYGVDFT--AEDFQDYQAVNKP---LWVDYQNGA------ITALQLQHTR 67 (224)
T ss_pred CccEEEEcCCCchhcch---hhHHHHHHHHHhCCCCc--HHHHHHHHHHHHH---HHHHHHcCC------CCHHHHHHHH
Confidence 57999999999999843 34578888888887642 3323222112211 111111110 111111
Q ss_pred -HHHHHHH---HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC
Q 020874 152 -KQFIASL---HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG 227 (320)
Q Consensus 152 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 227 (320)
..+.+.+ .....+.|.+.+.. ...++||+.++|+.|+ +|++++++||+....++..++.+++..+|+ .++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~~ 143 (224)
T PRK09449 68 FESWAEKLNVTPGELNSAFLNAMAE-ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD--LLVIS 143 (224)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhh-cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC--EEEEE
Confidence 0111110 01122233333332 2678999999999999 579999999999999999999999889998 88899
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDP-SSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
++++..||+|++|..+++++|+.+ ++++||||+. +|+++|+++|+.+|++.++.........++++++++.||.+.+.
T Consensus 144 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 144 EQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 999999999999999999999865 7999999998 69999999999999998543322222368999999988877543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=210.44 Aligned_cols=209 Identities=21% Similarity=0.274 Sum_probs=151.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
+++++|+||+||||+|+.. .+..+|.++++++|..... .+.+... .|..... +..++...+.+ ...+ +
T Consensus 2 ~~~~~viFD~DGTL~d~~~-~~~~a~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~---~ 70 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEV-ICSRAYVTMFAEFGITLSL-EEVFKRF--KGVKLYEIIDIISKEHGVT----LAKA---E 70 (221)
T ss_pred CCCCEEEECCCCCCCCChH-HHHHHHHHHHHHcCCCCCH-HHHHHHh--cCCCHHHHHHHHHHHhCCC----CCHH---H
Confidence 4589999999999999987 4678899999999876431 2222222 3333333 33334444432 1122 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
+...+.+...+ .. .....++||+.++|+.| +++++|+||+....+...++.+++..+|+. .++++++++..
T Consensus 71 ~~~~~~~~~~~----~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~~~ 141 (221)
T PRK10563 71 LEPVYRAEVAR----LF-DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQRW 141 (221)
T ss_pred HHHHHHHHHHH----HH-HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcCCC
Confidence 22222222211 11 12378899999999999 489999999999999999999988888863 47777788899
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEE 303 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~ 303 (320)
||+|++|..+++++|+.|+++|||||+..|+++|+++|+++|++..+.........++.+++++.||.+.
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875444322223456667777776653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=205.41 Aligned_cols=211 Identities=15% Similarity=0.239 Sum_probs=152.5
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHH-HHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEE-RKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 155 (320)
+|+|+||+||||+|+... +..++.++++++|.... ......+...+ .. ....+.. +. ..... ..+.+
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~--~~-~~~~~~~-~~-----~~~~~~~~~~~ 68 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPLT--EDMFAQYKEIN--QG-LWRAYEE-GK-----ITKDEVVNTRF 68 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCcc--HHHHHHHHHHh--HH-HHHHHHc-CC-----CCHHHHHHHHH
Confidence 579999999999999984 67788999988887643 22221111111 11 1111111 10 01111 01111
Q ss_pred HHHH---------HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe
Q 020874 156 ASLH---------KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA 226 (320)
Q Consensus 156 ~~~~---------~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~ 226 (320)
..+. +...+.|...+.. ...++||+.++|+.|+++ ++++++||+....++..++.+++..+|+ .+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd--~i~~ 144 (224)
T TIGR02254 69 SALLKEYNTEADEALLNQKYLRFLEE-GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD--DIFV 144 (224)
T ss_pred HHHHHHhCCCCcHHHHHHHHHHHHhc-cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC--EEEE
Confidence 1100 0122233333222 267899999999999999 9999999999999999999999889998 8999
Q ss_pred CCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhh
Q 020874 227 GDVVPRKKPDPAIYTLAASTL-GVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEE 303 (320)
Q Consensus 227 ~d~~~~~KP~~~~~~~~~~~~-g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~ 303 (320)
+++++..||+|++|+.+++++ |+.|+++|||||+. +|+++|+++|+.+|++.++.........++++++++.||...
T Consensus 145 ~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 145 SEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred cCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence 999999999999999999999 99999999999998 799999999999999998765543345788999998887654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=226.28 Aligned_cols=214 Identities=21% Similarity=0.228 Sum_probs=158.8
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCC----CCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKEL----GVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEE 149 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 149 (320)
.+|+++|||||||||+|+... +..+|.+++++++. ......+.+... .|.+.....+.+... ...+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~~~~~l~~~-------~~~~ 307 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREI--MGVPLPKVWEALLPD-------HSLE 307 (459)
T ss_pred HHhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHH--cCCChHHHHHHHhhh-------cchh
Confidence 467899999999999999985 78899999988741 111122333333 566555544333211 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC
Q 020874 150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV 229 (320)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~ 229 (320)
..++... ...+.+.+.+.....+++||+.++|+.|+++|++++|+||+....+...++.+++..+|+ .++++++
T Consensus 308 ~~~~~~~----~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~--~i~~~d~ 381 (459)
T PRK06698 308 IREQTDA----YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT--ETFSIEQ 381 (459)
T ss_pred HHHHHHH----HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc--eeEecCC
Confidence 1122212 222222222222346899999999999999999999999999999999999998888998 7888887
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
+. .||+|+.|..++++++ ++++|||||+.+|+.+|+++|+.+|++.+++.....+..+|++++++.|+...+..
T Consensus 382 v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 382 IN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST 455 (459)
T ss_pred CC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence 64 4778889999998875 68999999999999999999999999999877666667899999999988776543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=196.95 Aligned_cols=184 Identities=28% Similarity=0.447 Sum_probs=138.8
Q ss_pred EEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcH-HHHHHHHhhcCCCCCCCCCHHHHHHHHHH
Q 020874 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGK-ERMTAYFNKTGWPEKAPSDEEERKQFIAS 157 (320)
Q Consensus 79 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (320)
+|+||+||||+|+... +..+|.++++.+|.+. ..+..... .|.+. +.+..++...+.. ..++...++.+.
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 71 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIPF--DEEFNESL--KGVSREDSLERILDLGGKK----YSEEEKEELAER 71 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCChHHHHHHHHHhcCCC----CCHHHHHHHHHH
Confidence 4899999999999984 7889999999998863 33333322 34333 3344444544431 234444444444
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCH
Q 020874 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237 (320)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~ 237 (320)
+...+.+.+.. . ....++||+.++|+.|+++|++++++||+.. ....++.+++..+|+ .++++++++..||+|
T Consensus 72 ~~~~~~~~~~~-~--~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~p 144 (185)
T TIGR01990 72 KNDYYVELLKE-L--TPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD--AIVDPAEIKKGKPDP 144 (185)
T ss_pred HHHHHHHHHHh-c--CCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc--EEEehhhcCCCCCCh
Confidence 33333322211 1 1247899999999999999999999998653 457889998888998 788899899999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 238 ~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
++|+.+++++|++|+++|||||+.+|+++|+++||++|+|.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-27 Score=195.28 Aligned_cols=184 Identities=30% Similarity=0.421 Sum_probs=139.0
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
+++|+||+||||+|+.. .+..++.++++++|.... ....... .|...... ..++...+. ....+...++.
T Consensus 1 ~~~iiFD~DGTL~ds~~-~~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 71 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAP-LHAQAWKHLADKYGIEFD--KQYNTSL--GGLSREDILRAILKLRKP----GLSLETIHQLA 71 (185)
T ss_pred CCeEEEcCCCcccCChH-HHHHHHHHHHHHcCCCCC--HHHHHHc--CCCCHHHHHHHHHHhcCC----CCCHHHHHHHH
Confidence 47999999999999997 478899999999887632 2222211 34443333 333333211 12233333332
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
+...+.+.+.+......++||+.++|+.|+++|++++++||+ ..++.+++.+++..+|+ .++++++++..||
T Consensus 72 ----~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~--~v~~~~~~~~~kp 143 (185)
T TIGR02009 72 ----ERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD--AIVDADEVKEGKP 143 (185)
T ss_pred ----HHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC--EeeehhhCCCCCC
Confidence 223334444433334789999999999999999999999998 56888999998888898 7888888889999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
+|++|+++++++|+.+++++||||+..|+++|+++|+++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 999999999999999999999999999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=200.06 Aligned_cols=106 Identities=25% Similarity=0.391 Sum_probs=100.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++|+.|+++|++++++||++...+...++.+++..+|+ .++++++++..||+|++|+.+++++|+.|+++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~ 168 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD--AVLSADAVRAYKPAPQVYQLALEALGVPPDEV 168 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh--eeEehhhcCCCCCCHHHHHHHHHHhCCChhhE
Confidence 6789999999999999999999999999999999999998888898 89999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
+||||+.+|+.+|+++|+.+||+.++..
T Consensus 169 ~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 169 LFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred EEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 9999999999999999999999987543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=203.36 Aligned_cols=129 Identities=12% Similarity=0.124 Sum_probs=110.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD--LLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC--EEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 7889999999999999999999999999999999999998888998 88999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+||||+..|+++|+++||.+ ++|.++..... ..+..+..+++++.+.+..+
T Consensus 170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA--EKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc--chhccCCCcHHHHHHHhhhh
Confidence 99999999999999999985 66776554433 23444556666666655443
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=192.30 Aligned_cols=183 Identities=25% Similarity=0.352 Sum_probs=138.1
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (320)
.++++|+||+||||+|+.. .+..+|.++++++|.+.. ....... .|.....+.. ++...+. ....+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~-~~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~--- 70 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEP-THRKAWREVLGRYGLQFD--EQAMVAL--NGSPTWRIAQAIIELNQA----DLDPHA--- 70 (188)
T ss_pred CcceEEEEcCCCcCccCHH-HHHHHHHHHHHHcCCCCC--HHHHHHh--cCCCHHHHHHHHHHHhCC----CCCHHH---
Confidence 4579999999999999988 488899999999987532 2322222 4555444333 3332221 111221
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
+.. ...+.+.+.... ...++|| .++|+.|++. ++++|+||+....++..++.+++..+|+ .++++++++..
T Consensus 71 ~~~----~~~~~~~~~~~~-~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd--~i~~~~~~~~~ 141 (188)
T PRK10725 71 LAR----EKTEAVKSMLLD-SVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD--AVVAADDVQHH 141 (188)
T ss_pred HHH----HHHHHHHHHHhc-cCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce--EEEehhhccCC
Confidence 111 111222222222 2567886 5899999875 8999999999999999999999989998 89999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
||+|++|+++++++|++|+++|||||+.+|+++|+++|+++|++.
T Consensus 142 KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999875
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=199.63 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=104.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++. ++++++||++.. ++.+++..+|+ .++++++++..||+|++|..+++++|++|+++
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd--~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE--FVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc--eeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 68899999999999975 999999998765 36677888898 88889988999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCc----ccccCCCeeccCCCCChhhH
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAE----EDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~----~~~~~a~~vi~~l~el~~~l 304 (320)
+||||+. .|+.+|+++|+.+||+..+.... .....++++|+++.||.+.|
T Consensus 184 ~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 184 LHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 9999995 99999999999999998765432 11134888899988877653
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=192.49 Aligned_cols=183 Identities=20% Similarity=0.311 Sum_probs=130.1
Q ss_pred eEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchh--HHHHHHH------------hcCcHHH-----HHHHHhhc
Q 020874 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD--LYGELLK------------IGGGKER-----MTAYFNKT 138 (320)
Q Consensus 78 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~------------~g~~~~~-----~~~~~~~~ 138 (320)
|+|+||+||||+|+... +..++.++++++|+....+.. .+..... .|..... +...+...
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRA 79 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 58999999999999874 778999999999887532110 1111100 0222211 12222222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccc
Q 020874 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~ 218 (320)
+. ...+...+.... .+..........++||+.++|+.|+++|++++|+||+... +...++.+++..+
T Consensus 80 ~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~ 146 (203)
T TIGR02252 80 GV-----PDPESFEKIFEE-------LYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY 146 (203)
T ss_pred CC-----CCchhHHHHHHH-------HHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh
Confidence 21 011111111111 1111111122578999999999999999999999998765 5788898888888
Q ss_pred ccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEE
Q 020874 219 AEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIV 276 (320)
Q Consensus 219 ~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~ 276 (320)
|+ .++++++++..||+|++|+++++++|++|++++||||+. +|+++|+++|+.+||
T Consensus 147 fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 147 FD--FVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cc--eEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 98 888998899999999999999999999999999999998 899999999999985
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=227.63 Aligned_cols=211 Identities=31% Similarity=0.401 Sum_probs=159.9
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHh-hcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 153 (320)
.++++|+|||||||+|+.. .+..+|.++++++|++. +.+.+... .|.....+...+. ..+++. ...+ +
T Consensus 73 ~~ikaVIFDlDGTLiDS~~-~~~~a~~~~~~~~G~~i--t~e~~~~~--~G~~~~~~~~~~~~~~~l~~---~~~~---~ 141 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEE-PSRRAAVDVFAEMGVEV--TVEDFVPF--MGTGEANFLGGVASVKGVKG---FDPD---A 141 (1057)
T ss_pred CCCCEEEECCCCCeEeChH-HHHHHHHHHHHHcCCCC--CHHHHHHH--hCCCHHHHHHHHHHhcCCCC---CCHH---H
Confidence 4689999999999999998 48889999999998764 34444333 5555555443322 222211 1111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc-ccccceeEEeCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVPR 232 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~-~~~~~~~i~~~d~~~~ 232 (320)
..+.+.+.+.+.+.. .....++||+.++|+.|+++|++++|+||.....++..++.+++. .+|+ .+++++++..
T Consensus 142 ~~~~~~~~~~~~~~~---~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd--~iv~~~~~~~ 216 (1057)
T PLN02919 142 AKKRFFEIYLEKYAK---PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD--AIVSADAFEN 216 (1057)
T ss_pred HHHHHHHHHHHHhhh---cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC--EEEECccccc
Confidence 112222211121111 111347999999999999999999999999999999999999775 6788 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPE 302 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~ 302 (320)
.||+|++|+++++++|+.|+++|||||+..|+++|+++||.+|++.++... +.+ .+++++++++.|+..
T Consensus 217 ~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~-~~L~~~~a~~vi~~l~el~~ 287 (1057)
T PLN02919 217 LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSE-EILKDAGPSLIRKDIGNISL 287 (1057)
T ss_pred CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCH-HHHhhCCCCEEECChHHCCH
Confidence 999999999999999999999999999999999999999999999998643 333 478999999999853
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=192.91 Aligned_cols=128 Identities=21% Similarity=0.258 Sum_probs=115.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++|++.+.|+.|+++ ++++++||+....+...++++|+.++|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd--~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD--AVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh--eEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 78899999999999999 9999999999999999999999999999 89999999999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCc-ccccCCCeeccCCCCChhhHH
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAE-EDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~-~~~~~a~~vi~~l~el~~~l~ 305 (320)
+||||+. +|+.+|+++||++||++.+.... +....+++.+.++.|+.+.+.
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999999 78899999999999998776543 222568888899888887654
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=189.02 Aligned_cols=203 Identities=24% Similarity=0.301 Sum_probs=147.9
Q ss_pred CCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHH-HhhcCCCCCCCCCHHHHHHHHHHHHHHH
Q 020874 84 CDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFIASLHKRK 162 (320)
Q Consensus 84 lDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (320)
|||||+|+.. .+..+|.++++++|+.. ..+.+..+ .|.....+... +...++... ...+...+....
T Consensus 1 ~DGTL~Ds~~-~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----- 68 (220)
T PLN02811 1 MDGLLLDTEK-FYTEVQEKILARYGKTF--DWSLKAKM--MGKKAIEAARIFVEESGLSDS--LSPEDFLVEREA----- 68 (220)
T ss_pred CCCcceecHH-HHHHHHHHHHHHcCCCC--CHHHHHHc--cCCCHHHHHHHHHHHhCCCCC--CCHHHHHHHHHH-----
Confidence 7999999997 48889999999999863 33333332 56555444333 333333210 112222111111
Q ss_pred HHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH-hcCcccccceeEEeCC--CCCCCCCCHHH
Q 020874 163 TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGD--VVPRKKPDPAI 239 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~-~~~~~~~~~~~i~~~d--~~~~~KP~~~~ 239 (320)
.+...... ..++||+.++|+.|+++|++++|+||+........+.. .++..+|+ .+++++ +++..||+|++
T Consensus 69 --~~~~~~~~--~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~--~i~~~~~~~~~~~KP~p~~ 142 (220)
T PLN02811 69 --MLQDLFPT--SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMH--HVVTGDDPEVKQGKPAPDI 142 (220)
T ss_pred --HHHHHHhh--CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCC--EEEECChhhccCCCCCcHH
Confidence 11111112 67899999999999999999999999987655544333 34566787 788888 88889999999
Q ss_pred HHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 240 YTLAASTLG---VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 240 ~~~~~~~~g---~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
|..+++++| +.|+++|||||+..|+++|+++|+++|++.++.........++++++++.|+...-
T Consensus 143 ~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~~ 210 (220)
T PLN02811 143 FLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEE 210 (220)
T ss_pred HHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHHH
Confidence 999999997 99999999999999999999999999999988765555568999999999876543
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=182.87 Aligned_cols=174 Identities=28% Similarity=0.426 Sum_probs=130.9
Q ss_pred EEEeCCCccccCCccchHHHHHH-HHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHHHHHH
Q 020874 80 LLFDCDGVLVDTEKDGHRISFND-TFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQFIAS 157 (320)
Q Consensus 80 viFDlDGTL~d~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (320)
|+||+||||+|+.. .+..++.. +++.++.. .+.+.++.. .+..... +..++...+ ..
T Consensus 1 iifD~dgtL~d~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP-AIFRALQRLALEEFGLE--ISAEELREL--FGKSYEEALERLLERFG---------ID------- 59 (176)
T ss_dssp EEEESBTTTEEHHH-HHHHHHHHHHHHHTTHH--HHHHHHHHH--TTSHHHHHHHHHHHHHH---------HH-------
T ss_pred cEEECCCCcEeCHH-HHHHHHHHHHHHHhCCC--CCHHHHHHH--hCCCHHHHHHHhhhccc---------hh-------
Confidence 79999999999887 36667776 46666654 222222222 2333322 222222210 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCH
Q 020874 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237 (320)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~ 237 (320)
.....+.+.+.......+++||+.++|+.|+++|++++++||++...+...++++++..+|+ .++++++.+..||++
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~Kp~~ 136 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD--EIISSDDVGSRKPDP 136 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS--EEEEGGGSSSSTTSH
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc--cccccchhhhhhhHH
Confidence 11122222222222347899999999999999999999999999999999999998888898 899999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 238 ~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
++|+.+++++|+.|++++||||+..|+++|+++|+.+|+|
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999999999999999999986
|
... |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-25 Score=188.43 Aligned_cols=106 Identities=25% Similarity=0.305 Sum_probs=91.4
Q ss_pred CCCCChhHHHHHHHHHHcCCeEEEEcCCchHH--HHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 174 ~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~--~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
...++||+.++|+.|+++|++++++||+.... ....+..+++..+|+ .++++++++..||+|++|+.+++++|+.|
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~g~~~ 169 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFD--AVVESCLEGLRKPDPRIYQLMLERLGVAP 169 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCC--EEEEeeecCCCCCCHHHHHHHHHHcCCCH
Confidence 47789999999999999999999999986543 223333445567888 78888888889999999999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++++||||+..|+.+|+++|+.+|++.++.
T Consensus 170 ~~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 170 EECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999987643
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=180.00 Aligned_cols=98 Identities=27% Similarity=0.358 Sum_probs=91.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC----CCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR----KKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~----~KP~~~~~~~~~~~~g~~ 250 (320)
..++||+.++|+.|+ .+++++||++...+...++.+++..+|+ .++++++++. .||+|++|+++++++|++
T Consensus 83 ~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 83 LKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD--GIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred CCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC--eEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 678999999999997 4799999999999999999999888998 8888888776 599999999999999999
Q ss_pred CCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 251 PSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
|++++||||+..|+++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999975
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-24 Score=176.13 Aligned_cols=207 Identities=29% Similarity=0.397 Sum_probs=158.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHh-hcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 153 (320)
..+.+++||+||||+|++. .+..+++..+.++|...+++ .... ..|....++.+.+- .. ..+-..++
T Consensus 8 ~~~~~~lfD~dG~lvdte~-~y~~~~~~~~~~ygk~~~~~--~~~~--~mG~~~~eaa~~~~~~~-------~dp~s~ee 75 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTED-LYTEAWQELLDRYGKPYPWD--VKVK--SMGKRTSEAARLFVKKL-------PDPVSREE 75 (222)
T ss_pred cceeeEEEecCCcEEecHH-HHHHHHHHHHHHcCCCChHH--HHHH--HcCCCHHHHHHHHHhhc-------CCCCCHHH
Confidence 4567999999999999998 48889999999999855443 3322 36666666666554 22 12333444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhc-CcccccceeEEe--CCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL-GPERAEKIQIFA--GDVV 230 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~-~~~~~~~~~i~~--~d~~ 230 (320)
+.....+...+.+ .. ..+.||+.++++.|+.+|++++++|+.++...+.+++++. ....|. .++. +.++
T Consensus 76 ~~~e~~~~~~~~~----~~--~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~--~~v~~d~~~v 147 (222)
T KOG2914|consen 76 FNKEEEEILDRLF----MN--SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFS--HVVLGDDPEV 147 (222)
T ss_pred HHHHHHHHHHHhc----cc--cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcC--CCeecCCccc
Confidence 4444333333333 22 6788999999999999999999999999999999999885 444565 3444 5678
Q ss_pred CCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCCh
Q 020874 231 PRKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP 301 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~ 301 (320)
..+||+|++|..+++++|..+ +.+++|+|++..+++|++|||.+|+++...-.......++.+++++.+..
T Consensus 148 ~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 148 KNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred cCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 899999999999999999999 99999999999999999999999999884444444467888888877754
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=179.89 Aligned_cols=190 Identities=14% Similarity=0.135 Sum_probs=128.4
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHH-HHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE-RMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
|+|+|+||+||||+|+.. ++..+++++|++. +.+... .|.+.. .+...+. ...+...++
T Consensus 1 m~k~viFDlDGTLiD~~~-----~~~~~~~~~g~~~----~~~~~~--~g~~~~~~~~~~~~---------~~~~~~~~~ 60 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQS-----GLPYFAQKYNIPT----DHILKM--IQDERFRDPGELFG---------CDQELAKKL 60 (197)
T ss_pred CCcEEEEecCCceEchhh-----ccHHHHHhcCCCH----HHHHHH--HhHhhhcCHHHHhc---------ccHHHHHHH
Confidence 478999999999999554 4677888887642 222222 222211 1222211 112233333
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc--eeEEeCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK--IQIFAGDVVPR 232 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~--~~i~~~d~~~~ 232 (320)
.+.+.. +... ....++||+.++|+.|++. ++++++||++.......++.+++..+|+. ..+++++.
T Consensus 61 ~~~~~~-------~~~~-~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~--- 128 (197)
T PHA02597 61 IEKYNN-------SDFI-RYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH--- 128 (197)
T ss_pred hhhhhH-------HHHH-HhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc---
Confidence 333321 1111 1267899999999999987 46888899877666656666655544421 15666655
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCeEEEEcCCCCCcccccCCCeeccCCCCCh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA--GMKCIVTKSSYTAEEDFLNADAVFDCIGDPP 301 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a--G~~~v~v~~g~~~~~~~~~a~~vi~~l~el~ 301 (320)
.||+|++|..+++++| +++++||||+..|+++|+++ ||++|+++|++. +....+++.+.++.|+.
T Consensus 129 ~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 129 DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHh
Confidence 3678899999999999 88899999999999999999 999999999865 33345668888888765
|
2 hypothetical protein; Provisional |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-24 Score=177.27 Aligned_cols=107 Identities=24% Similarity=0.344 Sum_probs=95.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh-cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~-~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..++||+.++|+.|+++|++++++||++.......+... ++..+|+ .++++++++..||+|++|+.+++++|+.|++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 160 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSAAD 160 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcC--EEEEecccCCCCCCHHHHHHHHHHcCCChhH
Confidence 468999999999999999999999999887766655443 4566787 8899999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCC
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
++||||+..|+++|+++|+.+|++.++...
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~~~~ 190 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDKQTI 190 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCCccH
Confidence 999999999999999999999998765443
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=175.54 Aligned_cols=185 Identities=17% Similarity=0.097 Sum_probs=127.0
Q ss_pred EEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCc-------HHHHHHHHhhcCCCCCCCCCHHHH
Q 020874 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGG-------KERMTAYFNKTGWPEKAPSDEEER 151 (320)
Q Consensus 79 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 151 (320)
+|+|||||||+|+... +..++.++++++|.. ..+.+.+..+...+.. ...+..++....... .......
T Consensus 2 ~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 77 (197)
T TIGR01548 2 ALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV-SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSER--VRDAPTL 77 (197)
T ss_pred ceEEecCceEEechHH-HHHHHHHHHHHHcCC-CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchh--ccCCccH
Confidence 6899999999999984 888999999999743 2334445444332221 122333333211000 0011122
Q ss_pred HHHHHHHHHHHHHHH--HHHHH--hcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC
Q 020874 152 KQFIASLHKRKTELF--MVLIE--KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG 227 (320)
Q Consensus 152 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 227 (320)
+++.+.+.+.+.... ..... .....+.+++.++|+.|++.|++++|+||++...++..++.+++..+|+ .++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~~~~~ 155 (197)
T TIGR01548 78 EAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP--VQIWM 155 (197)
T ss_pred HHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC--EEEee
Confidence 222222222211100 00000 0012455667999999999999999999999999999999999889998 78888
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a 270 (320)
+++.. ||+|+.|..+++++|+++++++||||+.+|+++|+++
T Consensus 156 ~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 156 EDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 88776 9999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=172.54 Aligned_cols=100 Identities=36% Similarity=0.553 Sum_probs=92.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++|+.|+++|++++++||+.... ...+.++++..+|+ .++++++++.+||+|+.|+.+++++|++|+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~--~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 160 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD--VVIFSGDVGRGKPDPDIYLLALKKLGLKPEEC 160 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC--EEEEcCCCCCCCCCHHHHHHHHHHcCCCcceE
Confidence 5789999999999999999999999999887 66666688888888 78888888999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEE
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
+||||+..|+++|+++|+.+|+|
T Consensus 161 ~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 161 LFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999975
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-23 Score=165.43 Aligned_cols=154 Identities=26% Similarity=0.374 Sum_probs=117.1
Q ss_pred EEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHH
Q 020874 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL 158 (320)
Q Consensus 79 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (320)
+|+||+||||+|+.. .+..+|.+++++++.. .+.+... .|...+.+..+.. . ++.+
T Consensus 1 ~iifD~DGTL~d~~~-~~~~~~~~~~~~~~~~----~~~~~~~--~g~~~~~~~~~~~-------------~----~~~~ 56 (154)
T TIGR01549 1 AILFDIDGTLVDSSF-AIRRAFEETLEEFGED----FQALKAL--RGLAEELLYRIAT-------------S----FEEL 56 (154)
T ss_pred CeEecCCCcccccHH-HHHHHHHHHHHHhccc----HHHHHHH--HccChHHHHHHHH-------------H----HHHH
Confidence 489999999999986 4788899999988742 2222221 2222222221110 0 1111
Q ss_pred HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHH
Q 020874 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPA 238 (320)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~ 238 (320)
.. + . .....+||+.++|+.|+++|++++++||+....+...++.+ +..+|+ .++++++.+ .||+|+
T Consensus 57 ~~-----~----~-~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~--~i~~~~~~~-~Kp~~~ 122 (154)
T TIGR01549 57 LG-----Y----D-AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFD--LILGSDEFG-AKPEPE 122 (154)
T ss_pred hC-----c----c-hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCc--EEEecCCCC-CCcCHH
Confidence 10 1 1 12456799999999999999999999999999999999987 667777 788888877 999999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG 271 (320)
+|.++++++|+++ +++||||+..|+++|+++|
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=166.47 Aligned_cols=123 Identities=18% Similarity=0.229 Sum_probs=99.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC-----------C
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D 228 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~-----------d 228 (320)
+.++||+.++|+.|+++|++++++||++. ..+...++.++.. ++ .++.+ +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LD--GIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--cc--EEEECCCCCcccccccC
Confidence 57789999999999999999999999884 2334455554332 44 33322 2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccc-cCCCeeccCCCCCh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDF-LNADAVFDCIGDPP 301 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~-~~a~~vi~~l~el~ 301 (320)
+...+||+|++|..+++++|+++++++||||+.+|+++|+++|+.+ +++.+|....... ..||++++++.||.
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 4557899999999999999999999999999999999999999998 7999987654444 46999999999875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=169.79 Aligned_cols=120 Identities=23% Similarity=0.201 Sum_probs=95.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce-----eEEeCC---CCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD---VVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-----~i~~~d---~~~~~KP~~~~~~~~~~~ 246 (320)
.+++||+.++|+.|+++|++++++||+....+..+++.++...++... ..+++. ....++|++.+|+.++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 678999999999999999999999999999999999998877766421 111221 112356799999999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCC
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIG 298 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~ 298 (320)
+|+++++++||||+.+|+.+|+++|+..++ + ........|++++.+.+
T Consensus 164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~---~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 164 EGISPENTVAVGDGANDLSMIKAAGLGIAF-N---AKPKLQQKADICINKKD 211 (219)
T ss_pred cCCCHHHEEEEECCHHHHHHHHhCCCeEEe-C---CCHHHHHhchhccCCCC
Confidence 999999999999999999999999998654 1 22333357888887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=166.20 Aligned_cols=129 Identities=14% Similarity=0.160 Sum_probs=101.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchH--------HHHHHHHHhcCcccccceeEE-eCCCCCCCCCCHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK--------AVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDPAIYTLAAS 245 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~--------~~~~~l~~~~~~~~~~~~~i~-~~d~~~~~KP~~~~~~~~~~ 245 (320)
..++||+.++|++|+++|++++++||.... .....++.++...++. ... ++++++..||+|++|.++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL--CPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE--CcCCCCCCCCCCCCCHHHHHHHHH
Confidence 567899999999999999999999998641 1233355544332221 111 35566789999999999999
Q ss_pred HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc------ccc--cCCCeeccCCCCChhhHH
Q 020874 246 TLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE------EDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 246 ~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~------~~~--~~a~~vi~~l~el~~~l~ 305 (320)
++|++|++++||||+..|+++|+++|+.+|++.+++... +.+ ..++++++++.|+.+.++
T Consensus 105 ~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l~ 172 (173)
T PRK06769 105 KHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWIL 172 (173)
T ss_pred HcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHHh
Confidence 999999999999999999999999999999999987542 222 368999999998877653
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=166.68 Aligned_cols=127 Identities=24% Similarity=0.268 Sum_probs=102.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC-----CCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~-----d~~~~~K 234 (320)
+.++||+.++|+.|+++|++++|+||++. ..+...++.++. .|+ .++.+ ++++..|
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~--~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLD--GIYYCPHHPEDGCDCRK 103 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcCCC
Confidence 56789999999999999999999999863 334445665543 354 45432 4567899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCC--CeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNA--DAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a--~~vi~~l~el~~~l~ 305 (320)
|+|++|..+++++|+.+++++||||+.+|+.+|+++|+.+|++.+|....... ..+ +++++++.|+.+.+.
T Consensus 104 P~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 104 PKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred CCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887543333 346 899999988877654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=169.54 Aligned_cols=199 Identities=17% Similarity=0.167 Sum_probs=128.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
+++|+|+||+||||+|... +..+++.+|.+..+. +....+.....+..+ +...+.... ...+
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~---- 72 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAGEAVA-EWTAKAMGGSVPFEEALAARLSLFK------PSLS---- 72 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCChHHHH-HHHHHHHCCCCCHHHHHHHHHHHcC------CCHH----
Confidence 4578999999999999753 577888887642211 112221111112221 111122110 0011
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc--ccccceeE------E
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQI------F 225 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~--~~~~~~~i------~ 225 (320)
.+.+.+......++||+.++|+.|+++|++++|+|++....++.+++.+++. .+|..... +
T Consensus 73 -----------~~~~~~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~ 141 (224)
T PLN02954 73 -----------QVEEFLEKRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEY 141 (224)
T ss_pred -----------HHHHHHHHccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcE
Confidence 1111111122568999999999999999999999999999999999998765 24431111 1
Q ss_pred eCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc-cccCCCeeccCCCCC
Q 020874 226 AGDV----VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE-DFLNADAVFDCIGDP 300 (320)
Q Consensus 226 ~~d~----~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~-~~~~a~~vi~~l~el 300 (320)
.+.. ....++|++.++.+++++|. ++++||||+.+|+++|+++|+.++...+++...+ ....++++++++.|+
T Consensus 142 ~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 142 AGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred ECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 1111 12357789999999998885 6899999999999999998888665443333322 234699999998887
Q ss_pred hhh
Q 020874 301 PEE 303 (320)
Q Consensus 301 ~~~ 303 (320)
.+.
T Consensus 220 ~~~ 222 (224)
T PLN02954 220 IEV 222 (224)
T ss_pred HHh
Confidence 653
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-22 Score=164.64 Aligned_cols=204 Identities=20% Similarity=0.231 Sum_probs=136.0
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH-
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ- 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 153 (320)
+.+|+|+||++|||+..... ....+..+.+.+|++..-. .....+. .....+.......+.... .....++..
T Consensus 5 ~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~~--~~~~~~~--~~~~~~~~~~p~~~~~~g-~l~~~~ww~~ 78 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDDS--LIETIFR--KDFKKMSEKGPFFGLYSG-ELTLSQWWPK 78 (237)
T ss_pred cceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCHH--HHhHhhh--HHHHhhcccCCcccccCC-cccHHHHHHH
Confidence 56899999999999986654 5667899999999884322 1111110 000000000000111000 001111111
Q ss_pred HHHH--------HHHHHHHHHH-HHHHh---cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc
Q 020874 154 FIAS--------LHKRKTELFM-VLIEK---KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221 (320)
Q Consensus 154 ~~~~--------~~~~~~~~~~-~~~~~---~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~ 221 (320)
++.. +.+...+.|. ..+.. ..+.+.+++.++++.||+.|..++++||.+.+.. ..+..+++..+||
T Consensus 79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD- 156 (237)
T KOG3085|consen 79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFD- 156 (237)
T ss_pred HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhh-
Confidence 1111 1111111111 11111 1366788999999999999999999999987754 8888888889999
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF 287 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~ 287 (320)
.++.+.+++..||+|++|+.+++++|+.|++||||||+. ||+++|+++||.++.|-.........
T Consensus 157 -~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 157 -FVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred -hhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 788888899999999999999999999999999999999 89999999999999987655444433
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-23 Score=168.15 Aligned_cols=87 Identities=28% Similarity=0.381 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+ +++|+||++...+...++++++..+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFD--RAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHh--hhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 679999999998 378999999999999999999888998 68899998999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHc
Q 020874 255 VVVEDSTIGLAAAKAA 270 (320)
Q Consensus 255 v~VGDs~~Di~~A~~a 270 (320)
+||||+..|+.+|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=159.74 Aligned_cols=103 Identities=17% Similarity=0.060 Sum_probs=85.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC----------CCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----------KPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~----------KP~~~~~~~~~ 244 (320)
..++||+.++|+.|+++|++++|+||+....++.+++.++...++. ..+..++.+.. +++++.++.++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS--NELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE--EEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 6899999999999999999999999999999999999998766655 33333333322 23446889999
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcC
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKS 279 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~ 279 (320)
+++|+++++++||||+.+|+++|+.+|+.++....
T Consensus 157 ~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 157 RELNPSLTETVAVGDSKNDLPMFEVADISISLGDE 191 (201)
T ss_pred HHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC
Confidence 99999999999999999999999999998887443
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-21 Score=161.42 Aligned_cols=122 Identities=20% Similarity=0.174 Sum_probs=97.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh---cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~---~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
.++|||+.++|+.|+++|++++|+||++...+...++.. ++..+|+ .++.. . ...||+|+.|..+++++|++|
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~--~~fd~-~-~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFS--GYFDT-T-VGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcc--eEEEe-C-cccCCCHHHHHHHHHHhCcCh
Confidence 579999999999999999999999999998888888775 3444565 45532 2 337999999999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc-cc-cCCCeeccCCCCC
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE-DF-LNADAVFDCIGDP 300 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~-~~-~~a~~vi~~l~el 300 (320)
++++||||+..|+++|+++||.+|++.++.+... .. ..-+-++.+|+++
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~~ 220 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNAV 220 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCcccC
Confidence 9999999999999999999999999887654321 11 1115566777653
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=155.81 Aligned_cols=106 Identities=25% Similarity=0.308 Sum_probs=86.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEE-eCCCCCCCCCCHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDPA 238 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-~~d~~~~~KP~~~ 238 (320)
..++||+.++|+.|+++|++++++||++. ..+...++.+++.......... .++..+..||+|+
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence 46789999999999999999999999873 4566677777654211100111 1355567899999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g 280 (320)
+|+.+++++|+++++++||||+..|+++|+++|+++||+.+|
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 999999999999999999999999999999999999999765
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=168.18 Aligned_cols=123 Identities=20% Similarity=0.152 Sum_probs=98.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce-----eEEeCC---CCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGD---VVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-----~i~~~d---~~~~~KP~~~~~~~~~~~ 246 (320)
.+++||+.++|+.|++.|++++|+|++....++.++++++....+... ..+++. ++..+|||++.++.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~ 259 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE 259 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence 789999999999999999999999999988888888888665433210 222222 223578999999999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+|++++++++|||+.||+.|++.||+..++ +..+...+.|+++++ ..+|..
T Consensus 260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~----nAkp~Vk~~Ad~~i~-~~~l~~ 310 (322)
T PRK11133 260 YEIPLAQTVAIGDGANDLPMIKAAGLGIAY----HAKPKVNEQAQVTIR-HADLMG 310 (322)
T ss_pred cCCChhhEEEEECCHHHHHHHHHCCCeEEe----CCCHHHHhhCCEEec-CcCHHH
Confidence 999999999999999999999999998886 345555678999986 445544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-21 Score=155.65 Aligned_cols=107 Identities=12% Similarity=0.043 Sum_probs=96.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC-chHHHHHHHHHhcCc---------ccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLLGP---------ERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~-~~~~~~~~l~~~~~~---------~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
..+|||+.++|+.|+++|++++++||+ ....++..++.+++. .+|+ .++++++....||.+.+++.+.
T Consensus 44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd--~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFD--DRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhce--eeeeccCCchHHHHHHHHHHhh
Confidence 678999999999999999999999998 888889999999877 8888 7888887777788888888887
Q ss_pred HHc--CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC
Q 020874 245 STL--GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 245 ~~~--g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
+.+ |++|++++||||+..|+++|+++|+.+|++.+|...
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccH
Confidence 777 899999999999999999999999999999887653
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=158.81 Aligned_cols=129 Identities=20% Similarity=0.188 Sum_probs=98.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc--cccceeEEeCCCCCCCCCCHHH----------HHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAEKIQIFAGDVVPRKKPDPAI----------YTL 242 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~--~~~~~~i~~~d~~~~~KP~~~~----------~~~ 242 (320)
.+++||+.++|+.|+++|++++|+||+....++.+++.+ +.. ++.....+.++.+...||+|.. ...
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 689999999999999999999999999999999999987 433 2211134556666667777654 357
Q ss_pred HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc--ccccCCCeeccCCCCChhhHHhh
Q 020874 243 AASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--EDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 243 ~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~--~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
++++++..+.+++||||+.+|+.+|++||+.++ . +.... .....+.+.++++.|+.+.|.++
T Consensus 152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~-~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~ 215 (219)
T PRK09552 152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--R-DFLITKCEELGIPYTPFETFHDVQTELKHL 215 (219)
T ss_pred HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--H-HHHHHHHHHcCCCccccCCHHHHHHHHHHH
Confidence 888999999999999999999999999999444 2 21111 12334777889999888877554
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-20 Score=153.42 Aligned_cols=131 Identities=13% Similarity=-0.034 Sum_probs=94.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC--CCCCCCCHHHHHHHHHHcCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~--~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.+++||+.++|+.|+++ ++++++||+....++..++++++..+|.....+..+. .+..+++|.....++++++..++
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 78899999999999999 9999999999999999999998777765322121111 12222333344556666777778
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCe-eccCCCCChhhHHhhhh
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADA-VFDCIGDPPEERFDLAF 309 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~-vi~~l~el~~~l~~~~~ 309 (320)
+++||||+.+|+.+++++|+... + +.........+++ +++++.|+.+.+.+++-
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v~-~--~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGIL-F--RPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCEE-E--CCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 99999999999999999998554 2 2222111234554 89999999888777663
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=153.77 Aligned_cols=102 Identities=18% Similarity=0.145 Sum_probs=87.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC----chHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~----~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..+++++.++|+.|+++|++++++||. .+..++.+++.+++..+|+ .+++++.....||++. .+++++|+
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~--~i~~~d~~~~~Kp~~~---~~l~~~~i- 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNP--VIFAGDKPGQYQYTKT---QWIQDKNI- 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhee--EEECCCCCCCCCCCHH---HHHHhCCC-
Confidence 466788999999999999999999998 6677888888898888887 7888888777888875 35566776
Q ss_pred CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc
Q 020874 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE 285 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~ 285 (320)
++||||+.+|+.+|+++|+.+|.+.||++...
T Consensus 187 ---~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKEAGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHHHHCCCCEEEEEecCCCCC
Confidence 79999999999999999999999999977654
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.5e-20 Score=143.19 Aligned_cols=98 Identities=28% Similarity=0.393 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc--------hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN--------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~--------~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~ 246 (320)
..++||+.++|+.|++.|++++++||+. ...+...++.+++. ++ .++... ...||++++|+.++++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~--~~~~~~--~~~KP~~~~~~~~~~~ 97 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--ID--VLYACP--HCRKPKPGMFLEALKR 97 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EE--EEEECC--CCCCCChHHHHHHHHH
Confidence 4678999999999999999999999998 77888899988654 22 223333 5689999999999999
Q ss_pred c-CCCCCcEEEEec-CHhhHHHHHHcCCeEEEEc
Q 020874 247 L-GVDPSSCVVVED-STIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 247 ~-g~~~~~~v~VGD-s~~Di~~A~~aG~~~v~v~ 278 (320)
+ +++|++++|||| +..|+.+|+++|+.+|+++
T Consensus 98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred cCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 9 599999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-20 Score=147.00 Aligned_cols=107 Identities=14% Similarity=0.127 Sum_probs=92.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---------------hHHHHHHHHHhcCcccccceeEEe----CCCCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFA----GDVVPRKKP 235 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---------------~~~~~~~l~~~~~~~~~~~~~i~~----~d~~~~~KP 235 (320)
+.++||+.++|+.|+++|++++++||.+ ...+...++.+++. |+. .+++ +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~-ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDD-VLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeE-EEECCCCCCCCCCCCCC
Confidence 5779999999999999999999999963 45678888888765 541 2344 577788999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~ 284 (320)
++++|..+++++|+++++++||||+.+|+++|+++|+.++++.++.-..
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~~~ 153 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEELNW 153 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhcCH
Confidence 9999999999999999999999999999999999999999998775543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-19 Score=158.25 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=94.3
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHH-HHHHHhcCccccccee-EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVT-AIVSFLLGPERAEKIQ-IFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~-~~l~~~~~~~~~~~~~-i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.|+|+.++++.|+++|. ++++||.+..... ..+...+...+++... ....+....+||+|.+|..+++++|++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 48999999999998887 7899998764321 1122223333443111 1123445578999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----------CCCeeccCCCCC
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----------NADAVFDCIGDP 300 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----------~a~~vi~~l~el 300 (320)
+||||+. .|+.+|+++|+++|+|.||....+.+. .+|++++++.|+
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999996 999999999999999999988765542 589999999875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.1e-19 Score=142.11 Aligned_cols=96 Identities=17% Similarity=0.250 Sum_probs=82.8
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchH------------HHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEK------------AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~------------~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
+|||+.++|+.|+++|++++|+||++.. .++..++.+++. . + .+++++.....||+|++|+.++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~-~-~--~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP-I-Q--VLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC-E-E--EEEecCCCCCCCCccHHHHHHH
Confidence 6899999999999999999999998763 467788888653 2 3 4555665567899999999999
Q ss_pred HHcC--CCCCcEEEEecCH--------hhHHHHHHcCCeEEE
Q 020874 245 STLG--VDPSSCVVVEDST--------IGLAAAKAAGMKCIV 276 (320)
Q Consensus 245 ~~~g--~~~~~~v~VGDs~--------~Di~~A~~aG~~~v~ 276 (320)
+++| +++++++||||+. +|+++|+++|+.+++
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 9999 9999999999996 699999999999976
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-19 Score=153.92 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=99.6
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV---PRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~---~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
.|+++.++++.|++.+.+++++||.+.......+..++...+++ .+...... ..+||+|.+|+.+++++|++|++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVT--ALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHH--HHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 37899999999999899999999988766555554455555554 23322222 24799999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcc-c---ccCCCeeccCCCCChhhHH
Q 020874 254 CVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEE-D---FLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 254 ~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~-~---~~~a~~vi~~l~el~~~l~ 305 (320)
++||||+. +|+.+|+++|+.+++|.+|..... . ...++++++++.|+.+.++
T Consensus 199 ~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHHh
Confidence 99999996 899999999999999999864322 1 2468999999998876543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.9e-18 Score=135.54 Aligned_cols=118 Identities=18% Similarity=0.210 Sum_probs=98.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC------CCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV------PRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~------~~~KP~~~~~~~~~~~~g 248 (320)
+.+.+-.+++|-.|+.++ .++.||+...++...|+.+|+.+.|+ +|++.+.. -..||.+..|+.+++..|
T Consensus 99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFe--gii~~e~~np~~~~~vcKP~~~afE~a~k~ag 174 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFE--GIICFETLNPIEKTVVCKPSEEAFEKAMKVAG 174 (244)
T ss_pred cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhcc--ceeEeeccCCCCCceeecCCHHHHHHHHHHhC
Confidence 678888999999998875 88999999999999999999999999 55554432 258999999999999999
Q ss_pred CC-CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC
Q 020874 249 VD-PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP 300 (320)
Q Consensus 249 ~~-~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el 300 (320)
++ |.+++||+||.++|+.|++.|+.+|++...... .++++++.++.+.
T Consensus 175 i~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~----~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 175 IDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI----KGVDYALEQIHNN 223 (244)
T ss_pred CCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc----cchHHHHHHhhch
Confidence 98 999999999999999999999999998755433 3455555444444
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.2e-18 Score=137.83 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=85.0
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCc-hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~-~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.++||+.++|+.|+++|++++++||++ ...+...++.+++. .+ .+..||+|++|..+++++|++++++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~-------~~----~~~~KP~p~~~~~~l~~~~~~~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP-------VL----PHAVKPPGCAFRRAHPEMGLTSEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE-------EE----cCCCCCChHHHHHHHHHcCCCHHHE
Confidence 457999999999999999999999998 56666666655432 11 1347999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF 287 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~ 287 (320)
+||||+. .|+.+|+++|+.+|++.+|....+.+
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence 9999998 79999999999999999998776543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=136.68 Aligned_cols=95 Identities=15% Similarity=0.207 Sum_probs=79.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC--------------------CCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--------------------VPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~--------------------~~~~K 234 (320)
.+++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .+++++. ...+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI--EIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee--EEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 6889999999999999999999999999999999999998888887 6665432 12344
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC 274 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~ 274 (320)
+|++.++++.+.. +++++||||+.+|+++|+++++-+
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 5688888887754 789999999999999999997544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=130.43 Aligned_cols=101 Identities=29% Similarity=0.402 Sum_probs=89.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC----------------CCCHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----------------KPDPA 238 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~----------------KP~~~ 238 (320)
..+++++.++|+.|+++|++++++||+....+...++.+++..+++ .++..+..... ||++.
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD--PVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh--heeccchhhhhcccccccccccccccCCCCHH
Confidence 6889999999999999999999999999999999999987766666 56665544433 99999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
.+..++++++..++++++|||+.+|+++++++|+.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=141.37 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=94.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc-ceeEEeCCCCCCCCCCHHHH----------HHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE-KIQIFAGDVVPRKKPDPAIY----------TLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~-~~~i~~~d~~~~~KP~~~~~----------~~~ 243 (320)
.+++||+.++|+.|+++|++++|+|++....++.+++.++....+. ...++.++.+...||+|..+ ..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 6899999999999999999999999999999999998874333331 11344455555667776654 366
Q ss_pred HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc--ccccCCCeeccCCCCChhhHHh
Q 020874 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--EDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 244 ~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~--~~~~~a~~vi~~l~el~~~l~~ 306 (320)
+++++..+++++||||+.+|+.+|+.||+ ++++. .... .....+...++++.|+.+.|.+
T Consensus 149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARD-YLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred HHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehH-HHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 77777788999999999999999999998 34332 2111 1223356667788777776654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-17 Score=134.45 Aligned_cols=123 Identities=15% Similarity=0.054 Sum_probs=86.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEE------eCCCCCCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF------AGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~------~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
.+++||+.++|+.|++.| +++|+|++....+..+++.++...++...-.+ ++... ..++++..+...+++.|
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHHhhC
Confidence 689999999999999975 99999999999999999999877666532222 22221 34554544444445655
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCe-eccCCCCChhhHHh
Q 020874 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADA-VFDCIGDPPEERFD 306 (320)
Q Consensus 249 ~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~-vi~~l~el~~~l~~ 306 (320)
. ++++|||+.||+.+++.+|+..++... +... ...|+ ++.+.+|+...+..
T Consensus 145 ~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak----~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 145 Y---RVIAAGDSYNDTTMLSEAHAGILFHAP----ENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred C---CEEEEeCCHHHHHHHHhCCCCEEecCC----HHHHHhCCCCCcccCHHHHHHHHHH
Confidence 3 799999999999999999999988322 2222 22333 45666666655543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=133.96 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce------eEEeCCC---CCCCCCCHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI------QIFAGDV---VPRKKPDPAIYTLAAS 245 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~------~i~~~d~---~~~~KP~~~~~~~~~~ 245 (320)
..++||+.++|+.++++|++++|+|++....++.++++++...++... ..+++.. ...+++|...++.+++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 468999999999999999999999999999999999998877665421 1222211 1245677888999999
Q ss_pred HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 246 TLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 246 ~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
+.+++++++++|||+.+|+.+++.+|..++..
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 99999999999999999999999999887653
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=132.02 Aligned_cols=111 Identities=19% Similarity=0.163 Sum_probs=90.4
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|++|+++|++++|+||++...+...++.+++..+|+ + .||+++.++.+++++|+++++++||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~------~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ------G-----QSNKLIAFSDILEKLALAPENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe------c-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 7899999999999999999999999999997665543 1 2788999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC---ChhhHHhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD---PPEERFDLA 308 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e---l~~~l~~~~ 308 (320)
+.+++++|+. +.+.+. .......+++++.+-.+ +.+.+.+++
T Consensus 105 ~~~~~~ag~~-~~v~~~--~~~~~~~a~~i~~~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADA--HPLLIPRADYVTRIAGGRGAVREVCELLL 149 (154)
T ss_pred HHHHHHCCCe-EecCCc--CHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999998 554433 33445678999887754 445444444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-17 Score=134.63 Aligned_cols=113 Identities=18% Similarity=0.117 Sum_probs=93.8
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
.++.|+++|++++|+||++...++..++.+++..+|+ . .||+|+.|+.+++++|++++++++|||+.+|
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~--~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nD 110 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE--G---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVD 110 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe--c---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHH
Confidence 3567788999999999999999999999998776664 1 2799999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhhc
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAFC 310 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~~ 310 (320)
+.+++.+|+..++ .+.....+..|++++.+-.+ ...++.+.++.
T Consensus 111 i~~~~~ag~~~am---~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 111 LSMMKRVGLAVAV---GDAVADVKEAAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred HHHHHHCCCeEEC---cCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHH
Confidence 9999999999888 55666666789988765443 34556666654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=142.57 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=86.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC---------------chHHHHHHHHHhcCcccccceeE-Ee----CCCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQI-FA----GDVVPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~---------------~~~~~~~~l~~~~~~~~~~~~~i-~~----~d~~~~~K 234 (320)
..++||+.++|+.|+++|++++|+||. ....+..+++.+++. |+ .+ ++ +++...+|
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd--~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FD--EVLICPHFPEDNCSCRK 104 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--ee--eEEEeCCcCcccCCCCC
Confidence 578999999999999999999999995 244566677777552 44 34 33 35667899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
|+|.++..+++++++++++++||||+.+|+++|+++|+++|+++...
T Consensus 105 P~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC
Confidence 99999999999999999999999999999999999999999996543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=133.61 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc----hHHHHHHHHHhcC--cccccceeEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN----EKAVTAIVSFLLG--PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~----~~~~~~~l~~~~~--~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
..++||+.++|+.|+++|++++++||.. ......+++.+++ ..+|+ .+++++.. .||++.. .++++|
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~--vil~gd~~--~K~~K~~---~l~~~~ 185 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP--VIFAGDKP--GQYTKTQ---WLKKKN 185 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee--EEEcCCCC--CCCCHHH---HHHhcC
Confidence 6789999999999999999999999953 4556666766777 56665 67777753 6777643 556677
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc
Q 020874 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE 285 (320)
Q Consensus 249 ~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~ 285 (320)
+ ++||||+.+|+.+|++||+.+|.+.||++..-
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~~~ 218 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAANSTY 218 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCCCCC
Confidence 6 89999999999999999999999999977543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.69 E-value=7e-17 Score=139.82 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=84.6
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHH--H-HHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI--V-SFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~--l-~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
.|+.+.+.+..|+ .|.+ .++||.+..+.... + ..-.....+. ...+.+.+..+||+|.+|+.+++++++++++
T Consensus 122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~--~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLE--VATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHH--HHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 4566666677674 4666 67777654332110 0 0000000111 2234455667899999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCC
Q 020874 254 CVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDP 300 (320)
Q Consensus 254 ~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el 300 (320)
++||||+. +|+.+|+++|+++++|.+|....+.+ ..+|++++++.|+
T Consensus 198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999997 89999999999999999998766544 3589999988775
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-16 Score=139.97 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=94.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCC-------CCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGD-------VVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d-------~~~~~KP~~~~~~~~~~~ 246 (320)
..++||+.++|+.|+++|++++++||.+....+..++.++... +|+ .+++.+ +.+..||+|++++.++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 5779999999999999999999999999999999999998775 777 666666 345689999999999999
Q ss_pred cCC-CCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 247 LGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 247 ~g~-~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++. .+++++||||+.+|+++|+++|+.+|+|.||.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 998 57999999999999999999999999998874
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.1e-17 Score=144.69 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=87.0
Q ss_pred HHHHHHHHHHcCCeEEEEcCCchHH-HHHHHHHhcCcccccceeEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCcEEE
Q 020874 181 VAKLIDQALEKGVKVAVCSTSNEKA-VTAIVSFLLGPERAEKIQIFAGDVV---PRKKPDPAIYTLAASTLGVDPSSCVV 256 (320)
Q Consensus 181 ~~e~l~~L~~~G~~i~lvT~~~~~~-~~~~l~~~~~~~~~~~~~i~~~d~~---~~~KP~~~~~~~~~~~~g~~~~~~v~ 256 (320)
.......|++++-.+.++||.+... ....+...+...+++ .+...... ..+||+|.+|..+++++|+++++++|
T Consensus 175 l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~ 252 (311)
T PLN02645 175 IQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVG--AIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICM 252 (311)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHH--HHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEE
Confidence 3444555554333577788877533 122222233333444 33332222 23699999999999999999999999
Q ss_pred EecCH-hhHHHHHHcCCeEEEEcCCCCCcccc------cCCCeeccCCCCChhhHH
Q 020874 257 VEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF------LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 257 VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~------~~a~~vi~~l~el~~~l~ 305 (320)
|||+. +|+.+|+++|+++|+|.+|....+++ ..+|++++++.|+.+.+.
T Consensus 253 VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 253 VGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred EcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99998 99999999999999999998776543 358999999998877543
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=128.23 Aligned_cols=102 Identities=25% Similarity=0.233 Sum_probs=85.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce-----eEEeCCCCC---CCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAGDVVP---RKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-----~i~~~d~~~---~~KP~~~~~~~~~~~ 246 (320)
.+++||+.++++.|+++|++++|+|++....++.+.+.++....+... +++++...+ .++-|...++.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999877665522 122332222 334568889999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
+|++++++++||||.||+.|.+.+|.+.+.
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 999999999999999999999999988776
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7e-16 Score=120.00 Aligned_cols=91 Identities=26% Similarity=0.355 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VG 258 (320)
|.+.+-++.+++.|+++.|+||+++..+....+.+++. .+ ....||-+..|+++++++++++++|+|||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~------fi-----~~A~KP~~~~fr~Al~~m~l~~~~vvmVG 117 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP------FI-----YRAKKPFGRAFRRALKEMNLPPEEVVMVG 117 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc------ee-----ecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence 66777888999999999999999999999999888542 22 24589999999999999999999999999
Q ss_pred cCH-hhHHHHHHcCCeEEEEcCC
Q 020874 259 DST-IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 259 Ds~-~Di~~A~~aG~~~v~v~~g 280 (320)
|.. +|+.+++.+||.+|+|..-
T Consensus 118 DqL~TDVlggnr~G~~tIlV~Pl 140 (175)
T COG2179 118 DQLFTDVLGGNRAGMRTILVEPL 140 (175)
T ss_pred chhhhhhhcccccCcEEEEEEEe
Confidence 999 8999999999999998643
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=123.84 Aligned_cols=96 Identities=21% Similarity=0.225 Sum_probs=77.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccccee------EEeCC----CCCCCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ------IFAGD----VVPRKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~------i~~~d----~~~~~KP~~~~~~~~~ 244 (320)
.+++||+.++++.++++|++++|+|++....++.+++.++...++.... .+.+. ....+..|+..++.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 6789999999999999999999999999999999999987766554211 11221 1223455678899989
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHc
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~a 270 (320)
+++|++++++++|||+.+|+.+++.+
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=129.41 Aligned_cols=90 Identities=34% Similarity=0.480 Sum_probs=79.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++|+.|+++|++++++|+.+...+..+.+.+|+.+ .++.++.. +||++.+|..+++.+++.++++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v 198 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----SIVFARVI--GKPEPKIFLRIIKELQVKPGEV 198 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----EEEEESHE--TTTHHHHHHHHHHHHTCTGGGE
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----cccccccc--ccccchhHHHHHHHHhcCCCEE
Confidence 3588999999999999999999999999999999999987622 23333322 8999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcC
Q 020874 255 VVVEDSTIGLAAAKAAG 271 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG 271 (320)
+||||+.||+.|+++||
T Consensus 199 ~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 199 AMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESSGGHHHHHHHSS
T ss_pred EEEccCHHHHHHHHhCc
Confidence 99999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-16 Score=120.63 Aligned_cols=87 Identities=14% Similarity=0.137 Sum_probs=74.8
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCC-chHHHHHHHHHhc-------CcccccceeEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLL-------GPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~-~~~~~~~~l~~~~-------~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
++||+.++|+.|+++|++++++||+ ....+...++.++ +..+|+ .+++++ .+|+|+.|..+++++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~--~~~~~~----~~pkp~~~~~a~~~lg 103 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFD--PLTIGY----WLPKSPRLVEIALKLN 103 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhh--hhhhcC----CCcHHHHHHHHHHHhc
Confidence 4799999999999999999999999 8888888888876 556666 555554 3689999999999999
Q ss_pred --CCCCcEEEEecCHhhHHHHHH
Q 020874 249 --VDPSSCVVVEDSTIGLAAAKA 269 (320)
Q Consensus 249 --~~~~~~v~VGDs~~Di~~A~~ 269 (320)
+.|++++||||+..|+...+.
T Consensus 104 ~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 104 GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999887654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-15 Score=131.23 Aligned_cols=126 Identities=13% Similarity=0.003 Sum_probs=82.6
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCch-----HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNE-----KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~-----~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
.++++.++++.++..+..+.++++... ...+.+.+.++......... .-+....+..|+.+++.+++++|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~~ei~~~~~~K~~~l~~l~~~~gi~~ 215 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHD--QVDIARKGNSKGKRLTQWVEAQGWSM 215 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCc--eEEEecCCCChHHHHHHHHHHcCCCH
Confidence 356777888877777766667776442 12222223222110000000 01334455567899999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
+++++|||+.||++|++.+|+..++ ++..++..+.|++++++-+| +.+.|.++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 9999999999999999999975544 66666656789999887666 44544444
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.3e-15 Score=128.16 Aligned_cols=71 Identities=21% Similarity=0.321 Sum_probs=64.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCC
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDP 300 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el 300 (320)
...+||+|++|+.+++++++++++++||||+. +|+.+|+++|+.+++|.+|....+.+ ..+|++++++.|+
T Consensus 170 ~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 170 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred cccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 34689999999999999999999999999997 89999999999999999998876665 3599999999887
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-16 Score=128.83 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=79.7
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
.++.|+++|++++++||.....+...++.+++..+|. + .+++++.++.+++++|+++++++||||+.+|
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~------g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D 124 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ------G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLID 124 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec------C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 4566778999999999999999999999987654442 1 3567899999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeecc
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~ 295 (320)
+.+++++|+.++ +. +........++++++
T Consensus 125 ~~~a~~aG~~~~-v~--~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 125 WPVMEKVGLSVA-VA--DAHPLLLPRADYVTR 153 (183)
T ss_pred HHHHHHCCCeEe-cC--ChhHHHHHhCCEEec
Confidence 999999999955 32 333333457899986
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=124.73 Aligned_cols=75 Identities=29% Similarity=0.456 Sum_probs=66.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCChhhHHh
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el~~~l~~ 306 (320)
.+||.+.+|+.+++.++.++++++||||+. +||.+|+++||.+++|..|.+..++. ..++++++++.|+...+..
T Consensus 188 ~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~ 267 (269)
T COG0647 188 IGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKE 267 (269)
T ss_pred cCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhc
Confidence 489999999999999999999999999999 89999999999999999998866554 3578999999998876654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=114.69 Aligned_cols=194 Identities=16% Similarity=0.143 Sum_probs=116.5
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
..++|+||+|.|++..+. +.+.....|.+..... ......++.-.+.+.+... +
T Consensus 15 ~~~aVcFDvDSTvi~eEg------IdelA~~~G~~~~Va~----~T~rAMng~~~F~eaL~~R----------------l 68 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEG------IDELAAYCGVGEAVAE----VTRRAMNGEADFQEALAAR----------------L 68 (227)
T ss_pred hcCeEEEecCcchhHHhh------HHHHHHHhCchHHHHH----HHHHHhCCCCcHHHHHHHH----------------H
Confidence 347999999999987654 5666666665532211 1111122222222222211 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc--c------ccceeEEeC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--R------AEKIQIFAG 227 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~--~------~~~~~i~~~ 227 (320)
. +.+-........+.....++-||+.+++..|+++|.+++++|++...++..+..++|+.. . |++.+-+.+
T Consensus 69 ~-llqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g 147 (227)
T KOG1615|consen 69 S-LLQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG 147 (227)
T ss_pred H-HhcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc
Confidence 1 111111222233334457899999999999999999999999999999999999997765 2 222222222
Q ss_pred -CCCC---CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 228 -DVVP---RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 228 -d~~~---~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
|.-+ .+--+++.+..+.+ |.....++||||+.+|+++-.. |..++......-..+...++.+.+.+|..
T Consensus 148 fd~~~ptsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 148 FDTNEPTSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cccCCccccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 2111 23345777877766 8888899999999999998777 44455433222223333456665555443
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-13 Score=112.68 Aligned_cols=181 Identities=16% Similarity=0.058 Sum_probs=102.8
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHH-HHcCCCCCCchhHHHHHHHhcCcHHHHHHHH--h--hcCCCCCCCCCHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTF-KEKELGVTWDVDLYGELLKIGGGKERMTAYF--N--KTGWPEKAPSDEEER 151 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~--~~~~~~~~~~~~~~~ 151 (320)
.|+++||+||||++.. ....|...+ +++++... ........ +|.+........ . ..-+........+..
T Consensus 6 ~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~~-~~~~~~~~--ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 6 RRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNLL-LVLPLLPV--IGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred ceEEEEecCCCCcccc---hHHHHHHHHHHhcchhhH-HHhHHHHH--hccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 4799999999999444 344566666 77775532 22222222 333222211110 0 000000001123333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHH-HHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC--
Q 020874 152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLI-DQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD-- 228 (320)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l-~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d-- 228 (320)
++..+.+.+.+.+ . ..++||+.++| +.|++.|++++|+||+....++.+++.++.... + .+++++
T Consensus 80 ~~~~~~f~~~~~~--------~-~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~--~~i~t~l~ 147 (211)
T PRK11590 80 QALEADFVRWFRD--------N-VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-V--NLIASQMQ 147 (211)
T ss_pred HHHHHHHHHHHHH--------h-CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-C--ceEEEEEE
Confidence 3333333322211 1 46799999999 578888999999999999999999998864221 1 222221
Q ss_pred ------CCC-CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 229 ------VVP-RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 229 ------~~~-~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
..+ ...... =..++.+.+|.+...+.+.|||.+|+.+...+|-+.+.
T Consensus 148 ~~~tg~~~g~~c~g~~-K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 148 RRYGGWVLTLRCLGHE-KVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred EEEccEECCccCCChH-HHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 111 111111 12334444576777888999999999999999976654
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-14 Score=102.01 Aligned_cols=69 Identities=39% Similarity=0.587 Sum_probs=63.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCC
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDP 300 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs-~~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el 300 (320)
.+||+|.+|..+++++++++++++||||+ .+|+.+|+++|+.+|+|.+|....+.+ ..+|++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 58999999999999999999999999999 799999999999999999998887665 4799999999874
|
... |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.1e-13 Score=125.71 Aligned_cols=122 Identities=19% Similarity=0.177 Sum_probs=90.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.+.+++++++|++++++|++++..++.++++++. |+ .++++++....||+++. +.+.+.++ .+++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd--~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~ 142 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FD--GVFASDGTTNLKGAAKA-AALVEAFG--ERGF 142 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CC--EEEeCCCccccCCchHH-HHHHHHhC--ccCe
Confidence 67889999999999999999999999999999999998864 66 88888887777776653 33445555 3568
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
+|+||+.+|+.+++.+| ..+.|+.+..-....++....+..+...+..+.
T Consensus 143 ~yvGDS~~Dlp~~~~A~-~av~Vn~~~~l~~~a~~~~~~~~~~~~~~~~~~ 192 (479)
T PRK08238 143 DYAGNSAADLPVWAAAR-RAIVVGASPGVARAARALGPVERVFPPRPARLR 192 (479)
T ss_pred eEecCCHHHHHHHHhCC-CeEEECCCHHHHHHHHHcCCcceecCCCchHHH
Confidence 99999999999999999 666666543322222334445555555544333
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.1e-14 Score=122.94 Aligned_cols=100 Identities=18% Similarity=0.207 Sum_probs=81.0
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD-PSSCVV 256 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~-~~~~v~ 256 (320)
|+++.++++.|+++|+++ ++||.+..+....+..++...++......+.+....+||+|.+|+.+++++|.. +++++|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 799999999998899997 889988877765555555444554222245555568999999999999999975 579999
Q ss_pred EecC-HhhHHHHHHcCCeEEEEc
Q 020874 257 VEDS-TIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 257 VGDs-~~Di~~A~~aG~~~v~v~ 278 (320)
|||+ .+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999 599999999999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.8e-14 Score=126.63 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=80.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH----hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF----LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~----~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
.+|+|+.++|+.|+++|++++|+|+++...+...++. ++..++|+ .+..+ +||+++.+..+++++|+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~--~~~~~-----~~pk~~~i~~~~~~l~i~~ 103 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD--ARSIN-----WGPKSESLRKIAKKLNLGT 103 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee--EEEEe-----cCchHHHHHHHHHHhCCCc
Confidence 4579999999999999999999999999999999999 76777776 33322 6899999999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCe
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
+++|||||++.|+.++++++-.
T Consensus 104 ~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 104 DSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred CcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999997754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-13 Score=109.31 Aligned_cols=123 Identities=24% Similarity=0.308 Sum_probs=93.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---------------hHHHHHHHHHhcCcccccceeEE-eC----CCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIF-AG----DVVPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---------------~~~~~~~l~~~~~~~~~~~~~i~-~~----d~~~~~K 234 (320)
+.+.||+.+++..|++.|++++++||-+ ...+...|+..++ .++ .++ +. +...++|
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id--~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KID--GILYCPHHPEDNCDCRK 105 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcccC
Confidence 4567999999999999999999999932 2334455555433 344 333 32 2356899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccccc-CCCeeccCCCCCh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL-NADAVFDCIGDPP 301 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~-~a~~vi~~l~el~ 301 (320)
|++-+++.+++++++++++.+||||...|+++|.++|++.+.+..+......-. .++.+.+++.++.
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 999999999999999999999999999999999999999888776655433222 4666777777666
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=116.28 Aligned_cols=105 Identities=22% Similarity=0.123 Sum_probs=75.9
Q ss_pred EEEEcCCchHHHHHHHHHhcCcccccceeEEe----CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 020874 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA----GDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 195 i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~----~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a 270 (320)
+.+.++.....+...++.++. .+ .++. -+..+.+..|+..++.+++.+|++++++++|||+.||+.|++.+
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~--~~---~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~a 192 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGL--DL---EIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVA 192 (230)
T ss_pred eeecccccHHHHHHHHHHcCC--cE---EEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhc
Confidence 445555555556666666532 11 1111 23445677889999999999999999999999999999999999
Q ss_pred CCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 271 GMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 271 G~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
|+.+++ ++..+..++.|+++..+-++ +.+.|.++
T Consensus 193 g~~vam---~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 193 GFGVAV---ANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred CceEEe---cCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 998877 67777777789999876655 44444443
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.6e-14 Score=113.01 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=85.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
+.++||+.++|+.|+ .+++++|+|++....++.+++.++... +|+ .+++++++...||+ |.++++++|.+|++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~--~i~~~~d~~~~KP~---~~k~l~~l~~~p~~ 117 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY--RRLFRDECVFVKGK---YVKDLSLLGRDLSN 117 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee--eEEECccccccCCe---EeecHHHcCCChhc
Confidence 678999999999998 579999999999999999999987644 446 78999998889997 88899999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEE
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCI 275 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v 275 (320)
+|||||+..|+.+++++|+..-
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EEEEECCHHHhhcCccCEEEec
Confidence 9999999999999999997653
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=128.11 Aligned_cols=92 Identities=21% Similarity=0.279 Sum_probs=78.5
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCch------------HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNE------------KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~------------~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
++||+.+.|+.|++.|++++|+||... ..+..+++.+++. |+ .+++.+....+||++.++..++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fd--viia~~~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQ--VFIAIGAGFYRKPLTGMWDHLK 273 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eE--EEEeCCCCCCCCCCHHHHHHHH
Confidence 589999999999999999999999766 4577888888653 55 6677777778999999999999
Q ss_pred HHcC----CCCCcEEEEecCHhhHHHHHHcCC
Q 020874 245 STLG----VDPSSCVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 245 ~~~g----~~~~~~v~VGDs~~Di~~A~~aG~ 272 (320)
++++ +++++++||||...|+.+++++|.
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 9985 899999999999988887776664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=112.78 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=83.7
Q ss_pred HHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeE------EeCCCCCCCCCCH---
Q 020874 167 MVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI------FAGDVVPRKKPDP--- 237 (320)
Q Consensus 167 ~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i------~~~d~~~~~KP~~--- 237 (320)
.+.+.+..+++.||+.++++.|+++|++++|+|++....++..++++++...+. .+ +..+.+..++|.|
T Consensus 112 ~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~IvSN~L~f~~dGvltG~~~P~i~ 189 (277)
T TIGR01544 112 KEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVVSNFMDFDEDGVLKGFKGPLIH 189 (277)
T ss_pred HHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEEeeeEEECCCCeEeCCCCCccc
Confidence 333443458999999999999999999999999999999999999987644443 44 4445555667777
Q ss_pred ------HHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 020874 238 ------AIYTLAASTLG--VDPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 238 ------~~~~~~~~~~g--~~~~~~v~VGDs~~Di~~A~~a 270 (320)
..++.+++.++ .+++++|+|||+.+|+.||..+
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 77778889998 8899999999999999998877
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=109.84 Aligned_cols=102 Identities=18% Similarity=0.341 Sum_probs=74.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcC-CchHHHHHHHHHhcCc----------ccccceeEEeCCCCCCCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCST-SNEKAVTAIVSFLLGP----------ERAEKIQIFAGDVVPRKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~-~~~~~~~~~l~~~~~~----------~~~~~~~i~~~d~~~~~KP~~~~~~~~ 243 (320)
+.+||++.++|+.|+++|++++++|. ...+.+.+.|+.+++. ++|+...|+. + .|...|+.+
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~------g-sK~~Hf~~i 116 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP------G-SKTTHFRRI 116 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS------S--HHHHHHHH
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec------C-chHHHHHHH
Confidence 78999999999999999999999994 4577899999999888 6776433322 2 668899999
Q ss_pred HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC
Q 020874 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 244 ~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
.+..|++.++++||+|-..++......|+.+|.+.+|-..
T Consensus 117 ~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 117 HRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTW 156 (169)
T ss_dssp HHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--H
T ss_pred HHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCH
Confidence 9999999999999999999999999999999999886543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.3e-12 Score=109.02 Aligned_cols=110 Identities=15% Similarity=0.203 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHHHH--HcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC----CCC-----------C-----
Q 020874 175 LPLRPGVAKLIDQAL--EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD----VVP-----------R----- 232 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~--~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d----~~~-----------~----- 232 (320)
.++.||+.++++.+. +.|+.+.|+|+++.-.++.+|+..++...|. .|++.- .-+ +
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 889999999999994 4699999999999999999999999988887 566531 100 0
Q ss_pred CCCCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHcCCe-EEEEcCCCCCccc
Q 020874 233 KKPDPAIYTLAAST---LGVDPSSCVVVEDSTIGLAAAKAAGMK-CIVTKSSYTAEED 286 (320)
Q Consensus 233 ~KP~~~~~~~~~~~---~g~~~~~~v~VGDs~~Di~~A~~aG~~-~v~v~~g~~~~~~ 286 (320)
.-=|...++++++. -|+..++++||||+.||+.++...+-. .++.+.|+.-...
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~ 205 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKL 205 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHH
Confidence 11256777777766 377789999999999999999998765 6666666544443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-13 Score=117.18 Aligned_cols=101 Identities=18% Similarity=0.092 Sum_probs=73.5
Q ss_pred EEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 020874 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC 274 (320)
Q Consensus 195 i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~ 274 (320)
..+.+..........++.++.. +........-+..+.+.+|+..++++++++|++++++++|||+.||+.|++.+|+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v 188 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLN-LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGV 188 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCce-EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceE
Confidence 3455555556666677766432 110000011244567788899999999999999999999999999999999999988
Q ss_pred EEEcCCCCCcccccCCCeeccCCCC
Q 020874 275 IVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 275 v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
++ ++..++.++.|++|..+-.+
T Consensus 189 am---~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 189 AV---ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred Ec---CChhHHHHHhcCeecCCCCC
Confidence 87 77777777889998876555
|
catalyze the same reaction as SPP. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.5e-12 Score=98.57 Aligned_cols=130 Identities=18% Similarity=0.146 Sum_probs=94.9
Q ss_pred HHHHHHHhcC--CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh---cCcccccceeEEeCCCCCCCCCCHHH
Q 020874 165 LFMVLIEKKL--LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPAI 239 (320)
Q Consensus 165 ~~~~~~~~~~--~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~---~~~~~~~~~~i~~~d~~~~~KP~~~~ 239 (320)
.+.+.+..+. .++||++.+.|++-++.|++++|.|+++...+.-.+.+- .+..+|. +.+... --.|-...-
T Consensus 90 iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfs--GyfDtt--iG~KrE~~S 165 (229)
T COG4229 90 IWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFS--GYFDTT--IGKKRESQS 165 (229)
T ss_pred HHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhc--ceeecc--ccccccchh
Confidence 3444444443 579999999999999999999999999998776665543 1222343 444332 235667788
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCC
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIG 298 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~ 298 (320)
|.+++...|+.|.+++|..|++..+.+|+.+|+.++++.+..+.......-..++++|.
T Consensus 166 Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 166 YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred HHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 99999999999999999999999999999999999986544333222233445566665
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.6e-12 Score=109.26 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=65.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHH
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERF 305 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~ 305 (320)
|..+.+-.|..+++.+++.+|++++++++|||+.||++|.+.+|...++ ++..++.++.|++|..+-+| +.+.|.
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM---GNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe---cCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3456778889999999999999999999999999999999999998888 78888888899999877655 445454
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
+++
T Consensus 266 ~~~ 268 (270)
T PRK10513 266 KYV 268 (270)
T ss_pred HHh
Confidence 443
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.5e-11 Score=115.82 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=65.8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHH
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERF 305 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~ 305 (320)
|.++.+-.|..+++.+++.+|++++++++|||+.||++|.+.+|...++ ++..++.++.|++|..+-+| +...|.
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM---gNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL---SNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe---CCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4456777889999999999999999999999999999999999998888 88888888899999877665 445554
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
+++
T Consensus 577 k~~ 579 (580)
T PLN02887 577 RYA 579 (580)
T ss_pred Hhh
Confidence 443
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3e-11 Score=106.25 Aligned_cols=79 Identities=13% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCe--eccCCCC--Chhh
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADA--VFDCIGD--PPEE 303 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~--vi~~l~e--l~~~ 303 (320)
+.++.+--|..+++.+++.+|+++++++.|||+.||+.|.+.+|...++ ++..++.++.|++ ++.+-+| +...
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM---GNAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec---cCChHHHHHhCCCCeecCCCcchHHHHH
Confidence 3456677789999999999999999999999999999999999988887 7777777777875 6666554 5555
Q ss_pred HHhhhh
Q 020874 304 RFDLAF 309 (320)
Q Consensus 304 l~~~~~ 309 (320)
|.+++.
T Consensus 258 l~~~~~ 263 (272)
T PRK15126 258 LTHWLD 263 (272)
T ss_pred HHHHhc
Confidence 655553
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.1e-12 Score=105.96 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=71.8
Q ss_pred eEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 020874 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 194 ~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
.++++++.....+...++..+...... . ..-+..+.+..|...++++++++|++++++++|||+.||++|++.+|+.
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~--~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~ 185 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKERGLNLVDS--G-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK 185 (215)
T ss_pred EEEecCCccHHHHHHHHHhCCeEEEec--C-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe
Confidence 344455555566666666543222111 0 1113345667788999999999999999999999999999999999998
Q ss_pred EEEEcCCCCCcccccCCCeeccCCCC
Q 020874 274 CIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 274 ~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
+++ ++..++.++.|++++.+-++
T Consensus 186 vam---~na~~~~k~~A~~v~~~~~~ 208 (215)
T TIGR01487 186 VAV---ANADDQLKEIADYVTSNPYG 208 (215)
T ss_pred EEc---CCccHHHHHhCCEEcCCCCC
Confidence 888 66777777789999875443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.8e-12 Score=109.61 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=63.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCC--eeccCCCC--Chhh
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD--AVFDCIGD--PPEE 303 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~--~vi~~l~e--l~~~ 303 (320)
+.++.+-.|..+++.+++.+|++++++++|||+.||+.|.+.+|...++ ++..++.++.|+ +++.+-+| +...
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~~~v~~~n~edGVa~~ 259 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM---GNAHQRLKDLLPELEVIGSNADDAVPHY 259 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee---cCCcHHHHHhCCCCeecccCchHHHHHH
Confidence 3445677789999999999999999999999999999999999998888 778887777776 67766555 4445
Q ss_pred HHhhh
Q 020874 304 RFDLA 308 (320)
Q Consensus 304 l~~~~ 308 (320)
|.+++
T Consensus 260 l~~~~ 264 (266)
T PRK10976 260 LRKLY 264 (266)
T ss_pred HHHHh
Confidence 54443
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-10 Score=95.97 Aligned_cols=98 Identities=13% Similarity=-0.046 Sum_probs=67.4
Q ss_pred CCCChhHHHHHH-HHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC----CCC-----CCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLID-QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD----VVP-----RKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~-~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d----~~~-----~~KP~~~~~~~~~ 244 (320)
..++||+.++|+ .++++|++++|+||+....++.+.+..++.... .+++.+ +.+ ...- ..=..++.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i~t~le~~~gg~~~g~~c~g-~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLIASQIERGNGGWVLPLRCLG-HEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEEEEEeEEeCCceEcCccCCC-hHHHHHHH
Confidence 467999999996 788899999999999999999998775432222 222221 101 0111 11122334
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
+.+|.+.+.+.+.|||.+|+.+...+|-+.+.
T Consensus 169 ~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 169 QKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred HHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 44565667788999999999999999977664
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.3e-11 Score=107.52 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHHHHc--------CC-----CCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc---cCCCeec
Q 020874 232 RKKPDPAIYTLAASTL--------GV-----DPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF---LNADAVF 294 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~--------g~-----~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~---~~a~~vi 294 (320)
.+||++.+|+.+++.+ +. ++++++||||++ +||.+|+++|+.+|+|.+|....++. ..+++++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv 310 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIV 310 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEE
Confidence 5999999999988877 43 347999999999 89999999999999999884443322 2489999
Q ss_pred cCCCCChhhHH
Q 020874 295 DCIGDPPEERF 305 (320)
Q Consensus 295 ~~l~el~~~l~ 305 (320)
+++.|+...|+
T Consensus 311 ~~l~e~~~~i~ 321 (321)
T TIGR01456 311 NDVFDAVTKIL 321 (321)
T ss_pred CCHHHHHHHhC
Confidence 99998877653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.9e-11 Score=98.86 Aligned_cols=102 Identities=17% Similarity=0.238 Sum_probs=79.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC-------C----C
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-------D----V 229 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~-------d----~ 229 (320)
.+.|++..++..|++.|++|+|||=.+. ++++..|+.-+-.-... .+++. + .
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~--~~~~yyp~~w~~p~~y~~ 152 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIK--KVYAYYPKFWQEPSDYRP 152 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceee--eeeeeCCcccCChhhhhh
Confidence 4568899999999999999999996543 35666666542211111 23321 1 2
Q ss_pred CCCCCCCHHH--H--HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcC
Q 020874 230 VPRKKPDPAI--Y--TLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKS 279 (320)
Q Consensus 230 ~~~~KP~~~~--~--~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~ 279 (320)
++..||+|.+ | +++++++|+.|++++||+|+..++++|+++|+.++.+..
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 3678999999 8 999999999999999999999999999999999999864
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-10 Score=102.68 Aligned_cols=56 Identities=11% Similarity=0.047 Sum_probs=47.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~ 287 (320)
+.++.+ .|...++++++.+|+++ +++++|||+.||+.|++.+|+.+++ ++..++.+
T Consensus 184 ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam---~NA~~~~k 240 (273)
T PRK00192 184 HLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV---PGPDGPNP 240 (273)
T ss_pred EEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe---CCCCCCCc
Confidence 334555 78889999999999999 9999999999999999999999988 55555544
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.2e-11 Score=95.85 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=65.6
Q ss_pred ChhHHHHHHHHHHcCC--eEEEEcCCc-------hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 178 RPGVAKLIDQALEKGV--KVAVCSTSN-------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~--~i~lvT~~~-------~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
.|.+.+.++++++.+. +|.|+||+. ...++..-+.+++ .++.. ...|| ..+..+++.++
T Consensus 61 ~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI-------pvl~h---~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 61 PPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI-------PVLRH---RAKKP--GCFREILKYFK 128 (168)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC-------cEEEe---CCCCC--ccHHHHHHHHh
Confidence 3556667777877755 599999973 5556666666643 22211 23566 45556666665
Q ss_pred C-----CCCcEEEEecCH-hhHHHHHHcCCeEEEEcCC
Q 020874 249 V-----DPSSCVVVEDST-IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 249 ~-----~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g 280 (320)
. .|++++||||.. +|+.+|...|+.+||+..|
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 4 499999999999 8999999999999999876
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=104.39 Aligned_cols=49 Identities=33% Similarity=0.487 Sum_probs=46.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCeEEEEcCC
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSC-VVVEDST-IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~-v~VGDs~-~Di~~A~~aG~~~v~v~~g 280 (320)
.+||++.+|+.++++++++++++ +||||+. +|+.+|+++|+++++|.+|
T Consensus 186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 57999999999999999999887 9999998 8999999999999999775
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.3e-11 Score=100.92 Aligned_cols=73 Identities=26% Similarity=0.344 Sum_probs=62.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc--------CCCeeccCCCCChh
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL--------NADAVFDCIGDPPE 302 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~--------~a~~vi~~l~el~~ 302 (320)
.+||.+.++..++++++++|++++||||+. +||.-+++.|++++++..|-+..++.. .+|+.++++.++.+
T Consensus 222 ~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~ 301 (306)
T KOG2882|consen 222 LGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLP 301 (306)
T ss_pred cCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhh
Confidence 599999999999999999999999999999 699999999999999999887665542 26777777777655
Q ss_pred hH
Q 020874 303 ER 304 (320)
Q Consensus 303 ~l 304 (320)
.+
T Consensus 302 ~~ 303 (306)
T KOG2882|consen 302 LL 303 (306)
T ss_pred hc
Confidence 43
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.3e-11 Score=103.32 Aligned_cols=77 Identities=21% Similarity=0.170 Sum_probs=62.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFD 306 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~ 306 (320)
.++.+.-|..+++++++++|++++++++|||+.||+.|.+.+|...++ ++..+..++.|+++..+-++ +...|.+
T Consensus 183 i~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam---~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 183 ITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM---GNADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec---cCCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 346777889999999999999999999999999999999999988887 77777777788877666555 4444444
Q ss_pred hh
Q 020874 307 LA 308 (320)
Q Consensus 307 ~~ 308 (320)
++
T Consensus 260 ~~ 261 (264)
T COG0561 260 LL 261 (264)
T ss_pred Hh
Confidence 43
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.7e-12 Score=103.26 Aligned_cols=76 Identities=28% Similarity=0.388 Sum_probs=66.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCChhhHHh
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el~~~l~~ 306 (320)
.+||.+.+|+.+++-+|++|+++|||||.. .|+-+|+.+||..|.|+.|-....+. ..+|.++++|.|-.+.|++
T Consensus 179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~q 258 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLIIQ 258 (262)
T ss_pred ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHHh
Confidence 589999999999999999999999999999 59999999999999999886655222 3588899999998887765
Q ss_pred h
Q 020874 307 L 307 (320)
Q Consensus 307 ~ 307 (320)
-
T Consensus 259 ~ 259 (262)
T KOG3040|consen 259 N 259 (262)
T ss_pred h
Confidence 3
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.7e-10 Score=96.39 Aligned_cols=68 Identities=19% Similarity=0.193 Sum_probs=57.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
.++.+-.|..+++.+++.+|++++++++|||+.||+.|++.+|+.+++ ++..+..+..|++++.+-+|
T Consensus 182 I~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~---~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 182 ITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM---GNADEELKALADYVTDSNNE 249 (256)
T ss_pred ecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe---cCchHHHHHhCCEEecCCCC
Confidence 345677789999999999999999999999999999999999998777 55666666779998877554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.7e-10 Score=97.65 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=64.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..++||+.++|+.|+++|++++++||..... +...|+.+|....+.. .++..+. .++++..++.+.+.+++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-~lllr~~---~~~K~~rr~~I~~~y~I-- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-HLLLKKD---KSSKESRRQKVQKDYEI-- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-eEEeCCC---CCCcHHHHHHHHhcCCE--
Confidence 6789999999999999999999999987443 4477777766543332 5555543 35667778888787776
Q ss_pred CcEEEEecCHhhHHHH
Q 020874 252 SSCVVVEDSTIGLAAA 267 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A 267 (320)
+++|||+..|+..+
T Consensus 191 --vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 --VLLFGDNLLDFDDF 204 (266)
T ss_pred --EEEECCCHHHhhhh
Confidence 89999999999654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.6e-12 Score=95.86 Aligned_cols=98 Identities=21% Similarity=0.190 Sum_probs=79.6
Q ss_pred HHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 020874 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGL 264 (320)
Q Consensus 185 l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di 264 (320)
++.|.+.|++++|+|+.+...++...+.+|+..++. + .+.+...|+.+++++|+.++++.||||..+|+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~q------G-----~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQ------G-----ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeee------c-----hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 566778899999999999999999999997764443 1 23457899999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCCCcccccCCCeeccC
Q 020874 265 AAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC 296 (320)
Q Consensus 265 ~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~ 296 (320)
.....+|..++. ...+....+.+++|...
T Consensus 113 pvm~~vGls~a~---~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 113 PVMEKVGLSVAV---ADAHPLLKQRADYVTSK 141 (170)
T ss_pred HHHHHcCCcccc---cccCHHHHHhhHhhhhc
Confidence 999999998765 34445555667776443
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=93.33 Aligned_cols=94 Identities=22% Similarity=0.339 Sum_probs=66.9
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCc--------------hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHH
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSN--------------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLA 243 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~--------------~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~ 243 (320)
+|+|.+.|+.|.+.|++|+|+||-. ...++.+++.+++. .. .+++...-..+||.+-+++.+
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~--~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQ--VYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EE--EEECGCSSTTSTTSSHHHHHH
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eE--EEecCCCCCCCCCchhHHHHH
Confidence 4689999999999999999999841 12345556665433 11 233333337899999999999
Q ss_pred HHHcCC----CCCcEEEEecC-----------HhhHHHHHHcCCeEE
Q 020874 244 ASTLGV----DPSSCVVVEDS-----------TIGLAAAKAAGMKCI 275 (320)
Q Consensus 244 ~~~~g~----~~~~~v~VGDs-----------~~Di~~A~~aG~~~v 275 (320)
++.++. +.++.+||||. ..|.+-|.++|+++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 999875 88999999996 689999999999864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-09 Score=86.19 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=90.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC---------------CCCCCCCHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV---------------VPRKKPDPAI 239 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~---------------~~~~KP~~~~ 239 (320)
..+.||.++++++.++++++++|+|++-...+..+++.+++.+..+.+.+++.++ -..+.-++..
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~v 151 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV 151 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchh
Confidence 7889999999999999999999999999999999999997776665555554322 1233344444
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC--cccccCCCeeccCCCCChhhHHhhhhc
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA--EEDFLNADAVFDCIGDPPEERFDLAFC 310 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~--~~~~~~a~~vi~~l~el~~~l~~~~~~ 310 (320)
+... .-.++.++|.||+..|+.+|+....-++- ..-- .....-...-++.+.|+...+.+++..
T Consensus 152 I~~l----~e~~e~~fy~GDsvsDlsaaklsDllFAK---~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~~ 217 (220)
T COG4359 152 IHEL----SEPNESIFYCGDSVSDLSAAKLSDLLFAK---DDLLNYCREQNLNFLEFETFYEILKEIEKVLEV 217 (220)
T ss_pred HHHh----hcCCceEEEecCCcccccHhhhhhhHhhH---HHHHHHHHHcCCCCcccccHHHHHHHHHHHHhh
Confidence 4443 34667799999999999999987754321 1000 001122455677888888888777643
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.1e-10 Score=94.30 Aligned_cols=89 Identities=18% Similarity=0.241 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-cceeEEeCCCC---C--CCC---CCHHHHHHH---HHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQIFAGDVV---P--RKK---PDPAIYTLA---AST 246 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~~~i~~~d~~---~--~~K---P~~~~~~~~---~~~ 246 (320)
|++.++|+.++++|++++|+|++....++.+++.++..... ....+...... + .+. -|...++.+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 55559999999999999999999999999999988665422 11111100000 0 000 156667766 444
Q ss_pred cCCCCCcEEEEecCHhhHHHHH
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAK 268 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~ 268 (320)
+....++++||||.+|+.+++
T Consensus 172 -~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 -DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -THTCCEEEEEESSGGGHHHHH
T ss_pred -CCCCCeEEEEECCHHHHHHhC
Confidence 788899999999999999975
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1e-09 Score=89.49 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=82.1
Q ss_pred CCCChhHHHHHHHHHHcCC-eEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC----CCC-----CCC----------
Q 020874 175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD----VVP-----RKK---------- 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~-~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d----~~~-----~~K---------- 234 (320)
.+..||+.++++.+++.|. .+.|+|..+.-.++.+|++++..++|. .|++.- .-+ ...
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs 160 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTNPACVDASGRLLVRPYHTQHSCNLCPS 160 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence 7889999999999999985 999999999999999999999999888 666531 111 111
Q ss_pred --CCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHc-CCeEEEEcCCCCCcc
Q 020874 235 --PDPAIYTLAAST---LGVDPSSCVVVEDSTIGLAAAKAA-GMKCIVTKSSYTAEE 285 (320)
Q Consensus 235 --P~~~~~~~~~~~---~g~~~~~~v~VGDs~~Di~~A~~a-G~~~v~v~~g~~~~~ 285 (320)
-|..++.++... -|+..++.+||||+.||+..-... +..+++...|+.-++
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWK 217 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHh
Confidence 133444444433 377788999999999999887765 556777777765544
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.5e-09 Score=91.82 Aligned_cols=68 Identities=10% Similarity=-0.049 Sum_probs=53.7
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC-c-c----cccCCCeeccCCC
Q 020874 228 DVVPRKKPDPAIYTLAASTLGV---DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA-E-E----DFLNADAVFDCIG 298 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~---~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~-~-~----~~~~a~~vi~~l~ 298 (320)
+.++.+-.|..+++.+++.+|+ ++++++.|||+.||+.|.+.+|...++ ++.. + . ....++++....+
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM---~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV---KGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe---cCCCCCCcccccccCCceEeccCCC
Confidence 4456677889999999999999 999999999999999999999988777 3322 1 1 2235777766655
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.2e-10 Score=110.47 Aligned_cols=113 Identities=20% Similarity=0.171 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHHcC-CeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G-~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
.+++||+.++|+.|+++| ++++++||.+...++..+++++..++|. .+ .+++|++.+ ++++..+++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~--~~-------~p~~K~~~v----~~l~~~~~~ 449 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHA--EL-------LPEDKLAIV----KELQEEGGV 449 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeec--cC-------CHHHHHHHH----HHHHHcCCE
Confidence 469999999999999999 9999999999999999999998765554 11 122334444 444446679
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhh
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEE 303 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~ 303 (320)
++||||+.+|+.+++++| +++.+|+..+.....||+++. ++..+.+.
T Consensus 450 v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 450 VAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLLNDDLSSLPTA 498 (556)
T ss_pred EEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 999999999999999999 455556555545568999988 45555444
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-10 Score=109.38 Aligned_cols=114 Identities=18% Similarity=0.144 Sum_probs=88.9
Q ss_pred CCCChhHHHHHHHHHHcCC-eEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~-~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
.+++||+.++|+.|+++|+ +++++||.+...++..++++|...+|. .+ . +.++.+ ++++++...++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~--~~-----~--p~~K~~----~i~~l~~~~~~ 427 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHA--EL-----L--PEDKLE----IVKELREKYGP 427 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhh--cc-----C--cHHHHH----HHHHHHhcCCE
Confidence 4689999999999999999 999999999999999999998766554 11 1 223333 44555556689
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCC-CCcccccCCCeec--cCCCCChhhH
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSY-TAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~-~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
++||||+.||+.+++++|+ ++.+|+ ..+.....+|+++ +++.++.+.+
T Consensus 428 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999999999995 555573 4444556899998 7888886644
|
. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.3e-09 Score=88.57 Aligned_cols=45 Identities=9% Similarity=0.017 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI 275 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v 275 (320)
+.+-.|+..++++++.+|++++++++|||+.||+.|.+.+|...+
T Consensus 175 ~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 175 GASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred cCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 444457788999999999999999999999999999999997765
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1e-09 Score=94.65 Aligned_cols=59 Identities=10% Similarity=0.115 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAI 239 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~ 239 (320)
||+.++|++|+++|++++|+|++....+...++.+|+..+|+ .+++++++...||+++.
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd--vIIs~Gdv~~~kp~~e~ 207 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD--IIISGGHKAEEYSTMST 207 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC--EEEECCccccCCCCccc
Confidence 999999999999999999999999999999999999999998 89999888888888743
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.6e-09 Score=91.92 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=55.4
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCC----eeccC
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD----AVFDC 296 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~----~vi~~ 296 (320)
+..+.+++|+..++.+++++|++++++++|||+.||+.|++.+|...++ ++...+.++.++ ++.++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav---~na~~~~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV---GNHDPELEGLRHQQRIYFANN 221 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE---cCCcHHHHHhhcCCcEEEcCC
Confidence 4567788999999999999999999999999999999999999977766 666666666677 55543
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.01 E-value=4e-09 Score=91.08 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=59.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
+.+--|..+++.+++.+|++++++++|||+.||+.|.+.+|...++ ++..++.+..|++++.+-.|
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 4566779999999999999999999999999999999999988888 78888888899999998887
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=105.62 Aligned_cols=113 Identities=17% Similarity=0.128 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++++.|+++|++++++||.+...++..+++++.. ++ .+. .+++|.+.++.+ +..++++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-------~~~--~p~~K~~~v~~l----~~~~~~v 469 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-------AEV--LPDDKAALIKEL----QEKGRVV 469 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-------ccC--ChHHHHHHHHHH----HHcCCEE
Confidence 468999999999999999999999999999999999999763 22 122 123445555444 3367899
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
+||||+.||+.+++++|+. +.+|+..+.....||+++. ++.++...+
T Consensus 470 ~~VGDg~nD~~al~~A~vg---ia~g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 470 AMVGDGINDAPALAQADVG---IAIGAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred EEEeCCCccHHHHhhCCEE---EEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 9999999999999999964 4446555555578999984 666665544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.8e-09 Score=93.18 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=82.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh-c-------CcccccceeEEeCCCCC---------------
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-L-------GPERAEKIQIFAGDVVP--------------- 231 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~-~-------~~~~~~~~~i~~~d~~~--------------- 231 (320)
+..+||+.++|+.|+++|++++|+||.+...++..++.+ + ..++|+ .++++..-+
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD--~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFD--VVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCc--EEEeCCCCCcccCCCCceEEEeCC
Confidence 567999999999999999999999999999999999997 5 567887 666543211
Q ss_pred --CCCCCH------------HHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEcC
Q 020874 232 --RKKPDP------------AIYTLAASTLGVDPSSCVVVEDST-IGLAAAK-AAGMKCIVTKS 279 (320)
Q Consensus 232 --~~KP~~------------~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~-~aG~~~v~v~~ 279 (320)
..++.. --...+.+.+|+.+++++||||+. .|+.+++ .+||.+|+|..
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 011111 114557788899999999999999 8999998 99999999764
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-08 Score=86.52 Aligned_cols=67 Identities=10% Similarity=-0.014 Sum_probs=52.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc---ccccC--CC-eeccCCC
Q 020874 229 VVPRKKPDPAIYTLAASTLGVD--PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE---EDFLN--AD-AVFDCIG 298 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~--~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~---~~~~~--a~-~vi~~l~ 298 (320)
..+.+-.|...++++++.+|++ .+++++|||+.||+.|.+.+|...++ ++..+ +.++. |+ ++..+-+
T Consensus 170 i~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam---~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 170 VLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV---PGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred EecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe---CCCCCCccccCccCCCcEEEcCCCC
Confidence 3456778899999999999999 99999999999999999999988888 55542 33333 34 7765543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.93 E-value=4e-08 Score=85.25 Aligned_cols=51 Identities=16% Similarity=0.308 Sum_probs=45.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
+.++.+.+|...++++++++|++++++++|||+.||+.|++.++..++.+.
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS 210 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC
Confidence 456788999999999999999999999999999999999999766666664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-09 Score=88.45 Aligned_cols=98 Identities=12% Similarity=0.144 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
+..+||+.++|+.|.+. +.++|.|++...+++.+++.++... +|. .++..+.....+++ +.+.+..+|.++++
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~--~~l~r~~~~~~~~~---~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS--RRLYRESCVFTNGK---YVKDLSLVGKDLSK 114 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe--EEEEccccEEeCCC---EEeEchhcCCChhh
Confidence 56789999999999987 9999999999999999999996554 666 67777766555655 66778889999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
+|+|||++.|+.++.+.|+......
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCC
Confidence 9999999999999999998877654
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=76.26 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=94.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
-.+|+.+.+.+++|++. +.|++.|+...-.+.+.++-.|.. . + .++.+. ++..-..+++.++-.-+.+
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~-~-~--rv~a~a-------~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP-V-E--RVFAGA-------DPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc-e-e--eeeccc-------CHHHHHHHHHHhcCCCcEE
Confidence 46899999999999999 999999987766666776665422 1 1 344333 2455677788887767899
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+||||+.||+.+.+++.+..+-+..++.+...+..||+++.++.|+.+.+++.
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 99999999999999999887777766666777789999999998887766543
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.8e-09 Score=105.21 Aligned_cols=125 Identities=17% Similarity=0.195 Sum_probs=95.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPAI 239 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~~ 239 (320)
+++||+.++++.|++.|++++++|+.+...+..+.+++|+...+. .++++++.. ..+..|+-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS--QSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC--ceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 689999999999999999999999999999999999998766554 455554332 12345555
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC-CCcccccCCCeec--cCCCCChhhHH
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY-TAEEDFLNADAVF--DCIGDPPEERF 305 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~-~~~~~~~~a~~vi--~~l~el~~~l~ 305 (320)
-..+.+.++...+.+.||||+.||+.++++|++ ++..|. ..+-..+.||+++ +++..+...+.
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 566666666566789999999999999999995 555564 3344446799998 66887776654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.2e-09 Score=104.22 Aligned_cols=115 Identities=15% Similarity=0.075 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
-+++||+.+.|+.|++.|++++++|+.+...++.+++++++.+++. +.. |+.-..++++++..++++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~-------~~~------p~~K~~~i~~l~~~~~~v 715 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIA-------GVL------PDGKAEAIKRLQSQGRQV 715 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEe-------CCC------HHHHHHHHHHHhhcCCEE
Confidence 3689999999999999999999999999999999999987754332 111 222344666777778899
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCee--ccCCCCChhhHH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAV--FDCIGDPPEERF 305 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~v--i~~l~el~~~l~ 305 (320)
+||||+.||+.+++++|+. +.+|+..+..++.+|++ .+++.++...+.
T Consensus 716 ~~vGDg~nD~~al~~Agvg---ia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 716 AMVGDGINDAPALAQADVG---IAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred EEEeCCHHHHHHHHhCCee---EEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999999999999984 44477777667777765 456666666553
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.7e-09 Score=90.76 Aligned_cols=81 Identities=16% Similarity=-0.041 Sum_probs=61.6
Q ss_pred eEEeCCCCCCCC----CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCeEEEEcCCCCCcccccCCC
Q 020874 223 QIFAGDVVPRKK----PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA-------GMKCIVTKSSYTAEEDFLNAD 291 (320)
Q Consensus 223 ~i~~~d~~~~~K----P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a-------G~~~v~v~~g~~~~~~~~~a~ 291 (320)
.+..++.+...| -|+..++.++++++..+.+++||||+.+|+.+++.+ |..+|.+.++ .....|+
T Consensus 151 ~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~ 226 (244)
T TIGR00685 151 EVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAK 226 (244)
T ss_pred EEEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCce
Confidence 455554433333 357999999999999999999999999999999999 6667777534 2235699
Q ss_pred eeccCCCCChhhHHhh
Q 020874 292 AVFDCIGDPPEERFDL 307 (320)
Q Consensus 292 ~vi~~l~el~~~l~~~ 307 (320)
+++++.+|+.+.|..+
T Consensus 227 ~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 227 FHLTGPQQVLEFLGLL 242 (244)
T ss_pred EeCCCHHHHHHHHHHH
Confidence 9999999987766443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.1e-08 Score=82.35 Aligned_cols=109 Identities=19% Similarity=0.300 Sum_probs=69.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch-------HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE-------KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~-------~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~ 247 (320)
.++.||+.++|+.|.+.|..+.++|..+. ....+.|+++.+...++. .+++++ |- .+
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~-~~~~~~-----K~----------~v 135 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDN-LIFTGD-----KT----------LV 135 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCC-EEEESS-----GG----------GC
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchhe-EEEecC-----CC----------eE
Confidence 68899999999999999977777775432 344566666633223332 344432 21 12
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
+.+ ++|+|++..+..+...|++.|++...++.... --..+.++.|+.+.++.
T Consensus 136 ~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 136 GGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIEDLILS 187 (191)
T ss_dssp --S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHHHHHH
T ss_pred ecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHHHHHh
Confidence 222 89999999999999999999999877665443 45678999998877754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.6e-08 Score=83.71 Aligned_cols=81 Identities=20% Similarity=0.200 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC-CC------------------------
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP-RK------------------------ 233 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~-~~------------------------ 233 (320)
||+.++|++|+++|++++|+||+++..+...++.+++..+|+ .+++++... ..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFD--vII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFD--IIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcccc--EEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 899999999999999999999999999999999999998887 677665431 11
Q ss_pred ----CC-CHHHHHHHHHHcCCCC-CcEEEEecCH
Q 020874 234 ----KP-DPAIYTLAASTLGVDP-SSCVVVEDST 261 (320)
Q Consensus 234 ----KP-~~~~~~~~~~~~g~~~-~~~v~VGDs~ 261 (320)
-| .|+.....+++.|+.. ..+..|+|=.
T Consensus 229 ~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 229 DVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred cccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 11 3556666777777765 3445666654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-08 Score=86.85 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=74.0
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHH--HHHHHhcCcc-cccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT--AIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~--~~l~~~~~~~-~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.++||+.++|++|+++|++++++||+...... ..|+.+++.. .|+ .+++++++.. ..+.++++++|..++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~--~Ii~s~~~~~-----~~l~~~~~~~~~~~~ 96 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE--MIISSGEIAV-----QMILESKKRFDIRNG 96 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc--eEEccHHHHH-----HHHHhhhhhccCCCc
Confidence 56899999999999999999999998877655 7888888776 777 7888775432 467777788899999
Q ss_pred cEEEEecCHhhHHHHHHcCC
Q 020874 253 SCVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~ 272 (320)
++++|||+..|++....+|.
T Consensus 97 ~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 97 IIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred eEEEeCCcccchhhhcCCCc
Confidence 99999999999887765553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.7e-07 Score=72.60 Aligned_cols=95 Identities=19% Similarity=0.189 Sum_probs=60.5
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHH---HHHHHhc--CcccccceeEEeCCC---------CCCCCC---CHHHH
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSFLL--GPERAEKIQIFAGDV---------VPRKKP---DPAIY 240 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~---~~l~~~~--~~~~~~~~~i~~~d~---------~~~~KP---~~~~~ 240 (320)
.|++.++++.++++|+++.++|+.+..... ..++.+. +..+... .+++... +-..+| +.+.+
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g-~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG-PVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc-eEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 599999999999999999999999877664 5555520 1112211 3333322 112344 44555
Q ss_pred HHHHHHcCCCCCcEE-EEecCHhhHHHHHHcCCe
Q 020874 241 TLAASTLGVDPSSCV-VVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 241 ~~~~~~~g~~~~~~v-~VGDs~~Di~~A~~aG~~ 273 (320)
+.+.+.+.-.--..+ .+||+.+|+.+=.++|+.
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 555554432222343 478889999999999997
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.7e-07 Score=83.93 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=46.8
Q ss_pred CCCCCCCCHHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcC-CeEEEEcCCCCCccccc
Q 020874 229 VVPRKKPDPAIYTLAASTL---GVDPSSCVVVEDSTIGLAAAKAAG-MKCIVTKSSYTAEEDFL 288 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~---g~~~~~~v~VGDs~~Di~~A~~aG-~~~v~v~~g~~~~~~~~ 288 (320)
.++.+--|...++++++++ |++++++++|||+.||++|.+.+| ...++ ++..++.++
T Consensus 169 I~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam---~NA~~elk~ 229 (413)
T PLN02382 169 VLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV---SNAQEELLQ 229 (413)
T ss_pred EEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE---cCCcHHHHH
Confidence 3456667899999999999 999999999999999999999999 46665 555555443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.8e-07 Score=93.13 Aligned_cols=109 Identities=22% Similarity=0.224 Sum_probs=80.6
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
+++||+.+.++.|+++|++++++|+.+...+..+.+++|+..++ +..+..| ++.+ ++++ .+++++
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~--------~~~p~~K--~~~v----~~l~-~~~~v~ 632 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA--------GLLPEDK--VKAV----TELN-QHAPLA 632 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec--------CCCHHHH--HHHH----HHHh-cCCCEE
Confidence 68999999999999999999999999999999999999764221 1222223 3333 3444 236899
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChh
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPE 302 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~ 302 (320)
||||+.||..+++.+++. +..++..+...+.+|+++ +++.++..
T Consensus 633 mvGDgiNDapAl~~A~vg---ia~g~~~~~a~~~adivl~~~~l~~l~~ 678 (741)
T PRK11033 633 MVGDGINDAPAMKAASIG---IAMGSGTDVALETADAALTHNRLRGLAQ 678 (741)
T ss_pred EEECCHHhHHHHHhCCee---EEecCCCHHHHHhCCEEEecCCHHHHHH
Confidence 999999999999999944 444666666666788765 44444443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.1e-07 Score=85.77 Aligned_cols=45 Identities=7% Similarity=0.020 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEE
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVV--EDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~V--GDs~~Di~~A~~aG~~~v~ 276 (320)
.+-.|...++.+++.+|++.++++.| ||+.||+.|.+.+|...++
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 35677999999999999999999888 9999999999999998877
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.3e-07 Score=78.40 Aligned_cols=72 Identities=14% Similarity=0.001 Sum_probs=57.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc----CCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA----GMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a----G~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.+.+.-|...++++++.+|+..+++++|||+.||+.|.+.+ |.. |.+ |+.. ..|.+.+++.+++...|.
T Consensus 169 ~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vav--g~a~----~~A~~~l~~~~~v~~~L~ 241 (266)
T PRK10187 169 KPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKV--GTGA----TQASWRLAGVPDVWSWLE 241 (266)
T ss_pred eCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEE--CCCC----CcCeEeCCCHHHHHHHHH
Confidence 34556789999999999999999999999999999999988 544 333 4332 358889999998888776
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
.++
T Consensus 242 ~l~ 244 (266)
T PRK10187 242 MIT 244 (266)
T ss_pred HHH
Confidence 655
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-06 Score=73.85 Aligned_cols=43 Identities=7% Similarity=0.003 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCeEE
Q 020874 233 KKPDPAIYTLAASTLGV--DPSSCVVVEDSTIGLAAAKAAGMKCI 275 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~--~~~~~v~VGDs~~Di~~A~~aG~~~v 275 (320)
+--|+...+.+++.+++ .++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 44557788888888866 67789999999999999999998765
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.3e-06 Score=71.30 Aligned_cols=95 Identities=15% Similarity=0.090 Sum_probs=59.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHHhcCcccccceeEEeCCCCCCCCC----CHHHHHHHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGDVVPRKKP----DPAIYTLAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP----~~~~~~~~~~~~ 247 (320)
.+..|++.++++.|+++|++|.++||.+... +...|+..|...+ + .++-...-...|+ |.+....+. +-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~--~LiLR~~~d~~~~~~~yKs~~R~~l~-~~ 194 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-K--HLILRGLEDSNKTVVTYKSEVRKSLM-EE 194 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-C--eeeecCCCCCCchHhHHHHHHHHHHH-hC
Confidence 6788999999999999999999999998766 5566666654433 3 4443321122332 122222222 22
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
|. .=+..|||..+|+.+. .+|.++.-
T Consensus 195 GY--rIv~~iGDq~sDl~G~-~~~~RtFK 220 (229)
T TIGR01675 195 GY--RIWGNIGDQWSDLLGS-PPGRRTFK 220 (229)
T ss_pred Cc--eEEEEECCChHHhcCC-CccCceee
Confidence 22 2256889999999653 44544443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.8e-07 Score=91.15 Aligned_cols=126 Identities=18% Similarity=0.169 Sum_probs=88.6
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc--eeEEeCCCC----------------CCCCCCH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK--IQIFAGDVV----------------PRKKPDP 237 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~--~~i~~~d~~----------------~~~KP~~ 237 (320)
+++||+.+.++.|++.|++++++|+.+...+....+.+|....... ...+++.+. -..+-.|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 6899999999999999999999999998889999999876432110 012222111 1122223
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC--CCCChhhH
Q 020874 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC--IGDPPEER 304 (320)
Q Consensus 238 ~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~--l~el~~~l 304 (320)
+--.++++.++-..+.+.|+||+.||+.|.+.|++...+ +++.+.....||+++.+ +..+.+.+
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~---g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM---GSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC---CCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 333556666665567788999999999999999975443 55555556689999977 66655544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.7e-07 Score=67.34 Aligned_cols=83 Identities=18% Similarity=0.128 Sum_probs=63.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHc------C
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL------G 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~------g 248 (320)
+.+||.+.++++.++..|+-++.+|=+....+.+.|+.++...+|+. ++.- -..+| ..++.+++++. -
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy--~Vie--PhP~K--~~ML~~llr~i~~er~~~ 113 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHY--IVIE--PHPYK--FLMLSQLLREINTERNQK 113 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEE--EEec--CCChh--HHHHHHHHHHHHHhhccc
Confidence 78999999999999999999999998888889999999999999983 3321 11222 34555555544 3
Q ss_pred CCCCcEEEEecCHhh
Q 020874 249 VDPSSCVVVEDSTIG 263 (320)
Q Consensus 249 ~~~~~~v~VGDs~~D 263 (320)
+.|+++||++|..--
T Consensus 114 ikP~~Ivy~DDR~iH 128 (164)
T COG4996 114 IKPSEIVYLDDRRIH 128 (164)
T ss_pred cCcceEEEEeccccc
Confidence 689999999998743
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.40 E-value=4e-06 Score=61.91 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=50.7
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchH---HHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~---~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
++||+.++|+.|+++|.++.++||++.. .....|+.+|..--.+ .++++.. .....+++. ....+
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~--~i~ts~~---------~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDED--EIITSGM---------AAAEYLKEH-KGGKK 82 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GG--GEEEHHH---------HHHHHHHHH-TTSSE
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcC--EEEChHH---------HHHHHHHhc-CCCCE
Confidence 4699999999999999999999998643 3445556665543222 6666543 233334432 23456
Q ss_pred EEEEecCHhhHHHHHHcCC
Q 020874 254 CVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~ 272 (320)
++++|-. ...+.++.+|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 7777754 55666666664
|
... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.7e-05 Score=69.06 Aligned_cols=44 Identities=16% Similarity=0.118 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 233 KKPDPAIYTLAASTLGVD--PSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~--~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
.-+|....+.+.+.++-. +-.++.+|||+||+.|...+.++.|.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 457788888888877654 44789999999999999999988776
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.8e-07 Score=77.73 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=38.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcC
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKS 279 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~ 279 (320)
++..--|...++++++++++++++++++|||.||+.|. ..+...|.|.+
T Consensus 160 lP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 160 LPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp EETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred ccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 45556679999999999999999999999999999999 66667777743
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.1e-06 Score=83.70 Aligned_cols=104 Identities=15% Similarity=0.095 Sum_probs=77.6
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.||+.+.++.|+++|+++.++|+.+...+..+.+++|..+++ . +..+ .-|.+.++. ++-....+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~------a-~~~P--edK~~~v~~----lq~~g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI------A-EATP--EDKIALIRQ----EQAEGKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE------c-CCCH--HHHHHHHHH----HHHcCCeEE
Confidence 68999999999999999999999999999999999999764322 1 1111 112333433 333345699
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~ 295 (320)
|+||+.||..+.+.+++...+ +...+...+.+|.++-
T Consensus 513 mvGDG~NDapAL~~AdvGiAm---~~gt~~akeaadivLl 549 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAM---NSGTQAAKEAANMVDL 549 (675)
T ss_pred EECCCcchHHHHHhCCEeEEe---CCCCHHHHHhCCEEEC
Confidence 999999999999999977766 4455555677888753
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.5e-06 Score=84.92 Aligned_cols=114 Identities=23% Similarity=0.244 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
-++.|++.+.++.||++|+++.++|+.++..++.+.+++|+.++.. +-.+..| .+. .++++-.-..+
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~A-------ellPedK--~~~----V~~l~~~g~~V 602 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRA-------ELLPEDK--AEI----VRELQAEGRKV 602 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhec-------cCCcHHH--HHH----HHHHHhcCCEE
Confidence 3689999999999999999999999999999999999997644432 2222222 333 34444344679
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
.||||+.||..+...|.+...+ |.+.+-..+.||.++- ++..++..+
T Consensus 603 amVGDGINDAPALA~AdVGiAm---G~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 603 AMVGDGINDAPALAAADVGIAM---GSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred EEEeCCchhHHHHhhcCeeEee---cCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 9999999999999999866555 6666666778898753 365555544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.8e-07 Score=75.51 Aligned_cols=90 Identities=23% Similarity=0.199 Sum_probs=56.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchH---HHHHHHHHhcCcccccceeEEeCCCCCCCC----CCHHHHHHHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAGDVVPRKK----PDPAIYTLAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~---~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K----P~~~~~~~~~~~~ 247 (320)
.+..||+.++++.++++|++|.++||.+.. .....|+..|...... .++.++.-...+ =|..-...+.++
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~--l~lr~~~~~~~~~~~~yK~~~r~~i~~~- 190 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH--LILRPDKDPSKKSAVEYKSERRKEIEKK- 190 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC--GEEEEESSTSS------SHHHHHHHHHT-
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch--hccccccccccccccccchHHHHHHHHc-
Confidence 466899999999999999999999987544 4556666666443332 333332211111 123333444443
Q ss_pred CCCCCcEEEEecCHhhHHHHHH
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKA 269 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~ 269 (320)
|.. =+.+|||..+|+..++.
T Consensus 191 Gy~--Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 191 GYR--IIANIGDQLSDFSGAKT 210 (229)
T ss_dssp TEE--EEEEEESSGGGCHCTHH
T ss_pred CCc--EEEEeCCCHHHhhcccc
Confidence 322 26799999999999443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.4e-06 Score=81.52 Aligned_cols=113 Identities=13% Similarity=0.050 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.||+.+.+++||++|+++.++|+.+...+..+.+++|+.+++. + -+ |+--.++.+.++-.-+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A-------~----~~--PedK~~iV~~lQ~~G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA-------E----CK--PEDKINVIREEQAKGHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc-------C----CC--HHHHHHHHHHHHhCCCEEE
Confidence 689999999999999999999999999999999999997754321 1 12 2333444445444445688
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
|+||+.||..+.++|.+...+ |.+.+-.++.+|.++ +++..+.+.+
T Consensus 508 MtGDGvNDAPALa~ADVGIAM---gsGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGLAM---NSGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred EECCChhhHHHHHhCCEEEEe---CCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 999999999999999966555 666666677899885 3444444433
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.2e-05 Score=67.55 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=56.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHH---HHHHHhcCcccccceeEEeCCCCCCCCCCHHHHH----HHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYT----LAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~---~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~----~~~~~~ 247 (320)
.+..||+.++.+.+++.|++|.++||.++.... ..|+..|...+ + .++-.+.-...+.+.--|+ .-+.+-
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~--~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-E--KLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-c--eeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 677899999999999999999999999865443 44444443322 2 3443322111221111122 111122
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
|. .=+..|||..+|+.+....+.++.-+
T Consensus 221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKL 248 (275)
T TIGR01680 221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKL 248 (275)
T ss_pred Cc--eEEEEECCCHHhccCCCccCcceecC
Confidence 22 22568899999996554222344433
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.24 E-value=5e-05 Score=65.66 Aligned_cols=107 Identities=12% Similarity=0.190 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhc--Ccccccc----eeEE------eC--C--------CCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL--GPERAEK----IQIF------AG--D--------VVPRK 233 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~--~~~~~~~----~~i~------~~--d--------~~~~~ 233 (320)
.+-+.+.++++.|++.|+++..+|.....+....++.|. +.++-.. ...+ .. . -+..+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 456899999999999999999999987776666555551 2222211 0111 00 0 01235
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH----HcCCeEEEEcCCCC
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAK----AAGMKCIVTKSSYT 282 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~----~aG~~~v~v~~g~~ 282 (320)
-+++.++..++.+.|..|+.+|||+|+..++.... ..|+.++++.+...
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 67789999999999999999999999997766544 36999998876543
|
The function is not known. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.5e-06 Score=65.57 Aligned_cols=97 Identities=22% Similarity=0.201 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce--eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI--QIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~--~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~ 256 (320)
+-+..++....++|-.|+.+|+...-.++.+-+.|...-..+.+ .++.+|. .||...--...++..++ -++
T Consensus 117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~----~Ih 189 (237)
T COG3700 117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNI----RIH 189 (237)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCc----eEE
Confidence 34567777778889999999987654444433333111111111 3444443 23332222334555555 489
Q ss_pred EecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 257 VEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 257 VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
.|||.+|+.+|+++|++.|-+.+..+
T Consensus 190 YGDSD~Di~AAkeaG~RgIRilRAaN 215 (237)
T COG3700 190 YGDSDNDITAAKEAGARGIRILRAAN 215 (237)
T ss_pred ecCCchhhhHHHhcCccceeEEecCC
Confidence 99999999999999999888765433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.1e-06 Score=80.19 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.||+.+.++.|+++|+++.++|+.+...+..+.+++|+.+++. +. . |+--..+.+.++-..+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A-------~~----~--PedK~~iV~~lQ~~G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA-------EA----T--PEDKLALIRQEQAEGRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc-------cC----C--HHHHHHHHHHHHHcCCeEE
Confidence 578999999999999999999999999999999999997743221 11 2 2222334444443445688
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
|+||+.||..+.+.|.+...+ +.+.+-.++.+|.++- ++..+.+.+
T Consensus 512 MtGDGvNDAPALa~ADVGIAM---gsGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVAM---NSGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred EECCCcchHHHHHhCCEeEEe---CCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 999999999999999976666 6566666678998753 344444333
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.15 E-value=6.2e-06 Score=84.51 Aligned_cols=124 Identities=19% Similarity=0.130 Sum_probs=86.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPAI 239 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~~ 239 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+..-.. .++++++.. ..+-.|+-
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 688999999999999999999999999999999999997653221 233332211 01122333
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC-CCCcccccCCCeecc--CCCCChhhH
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS-YTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g-~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
-..+.+.++-.-+.+.|+||+.||..+.++|.+...+ | .+.+-..+.||+++. +|..+...+
T Consensus 657 K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm---g~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 657 KQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM---GISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec---CCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3334444433345689999999999999999966655 5 445556678999876 555555544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00011 Score=60.86 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=87.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc---cccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE---RAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~---~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..+|+++...++.-+..|++++|.|.++...+..+...-+-.+ +.+ ..+.. .+ -.|-.-..|..+.+..|.++
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~--gyfDt-~i-G~K~e~~sy~~I~~~Ig~s~ 197 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYIS--GYFDT-TI-GLKVESQSYKKIGHLIGKSP 197 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhh--hhhhc-cc-cceehhHHHHHHHHHhCCCh
Confidence 4689999999999999999999999999887665554432111 111 22211 12 35667788999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEE-cCCCCCcccccC-CCeeccCCCCC
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVT-KSSYTAEEDFLN-ADAVFDCIGDP 300 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v-~~g~~~~~~~~~-a~~vi~~l~el 300 (320)
.++++.-|.+....+|+.+|+.+..+ +.|+....+-+. .=.++.+|..|
T Consensus 198 ~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 198 REILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred hheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 99999999999999999999997775 445554443332 22355666554
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.6e-06 Score=82.76 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=86.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPAI 239 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~~ 239 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.. + .++++.+.. ..+-.|+-
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~--~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--G--EVLIGSDIETLSDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--c--CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence 678999999999999999999999999999999999997731 1 344443321 11222333
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
-.++.+.++-.-+-+.|+||+.||..+.+.|.+...+ |.+.+-..+.||.++- ++..+...+
T Consensus 626 K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm---g~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 626 KERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV---DGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred HHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe---CCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 3444444443445688999999999999999976655 5555556678998873 444444433
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.4e-05 Score=82.41 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=87.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-c-------ceeEEeCCCCC----------------
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-E-------KIQIFAGDVVP---------------- 231 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~-------~~~i~~~d~~~---------------- 231 (320)
++.|++.++++.|++.|++++++|+.+...+..+.+++|+..-. . ...++++.++.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 78999999999999999999999999999999999999774321 0 01344443321
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC-CCCcccccCCCeeccC--CCCChhhH
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS-YTAEEDFLNADAVFDC--IGDPPEER 304 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g-~~~~~~~~~a~~vi~~--l~el~~~l 304 (320)
..+-.|+--..+.+.++-..+.+.|+||+.||..+.+.|.+...+ | .+.+-..+.||+++.+ |..+...+
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm---g~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM---GINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec---CCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 122233333344444443445688999999999999999976665 4 3344455689998854 66665544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.1e-05 Score=82.05 Aligned_cols=122 Identities=18% Similarity=0.107 Sum_probs=87.0
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPAI 239 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~~ 239 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.. + .++++.+.. ..+-.|+-
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~--~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~ 625 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--G--EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQ 625 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--C--CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHH
Confidence 688999999999999999999999999999999999997741 1 334333321 11123333
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
-.++.+.++-.-+-+.|+||+.||..+.+.|.+...+ |.+.+-..+.||.++ ++|..+...+
T Consensus 626 K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm---g~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 626 KSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV---DSGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe---CcccHHHHHhcCEEEecCChHHHHHHH
Confidence 4444555444445688999999999999999976555 545555567899987 4555555544
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.9e-05 Score=80.11 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPAI 239 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~~ 239 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.. . .++++.+.. ..+-.|+-
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~--~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~ 590 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--N--DFLLGADIEELSDEELARELRKYHIFARLTPMQ 590 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--C--CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHH
Confidence 578999999999999999999999999999999999997742 1 233332221 01112323
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 240 YTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 240 ~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
-.++.+.++-.-+.+.|+||+.||..+.+.|.+...+ +.+.+-..+.||.++- +|..+...+
T Consensus 591 K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm---g~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 591 KSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV---DTAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe---CCccHHHHHhCCEEEecCChHHHHHHH
Confidence 3333444433445688999999999999999977665 5455555678998873 444444433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00058 Score=64.73 Aligned_cols=94 Identities=12% Similarity=0.011 Sum_probs=57.3
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH-hcCccccc------ceeEEeCCCCCCCCC-C-HHHHHHHHHHc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAE------KIQIFAGDVVPRKKP-D-PAIYTLAASTL 247 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~-~~~~~~~~------~~~i~~~d~~~~~KP-~-~~~~~~~~~~~ 247 (320)
+++.+.+.+ ++.|.. +|+|...+.+++..++. +|...... ..+.+++...+. .+ . ..-..++.+.+
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~-~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP-GVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC-CCCccHHHHHHHHHHh
Confidence 566665544 566754 99999999999999976 55442211 013444432221 01 0 11223333556
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
|.+... +..|||.+|..+...++-..+.
T Consensus 186 g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 186 GDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred CCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 655444 8999999999999999966554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.8e-05 Score=66.49 Aligned_cols=47 Identities=11% Similarity=-0.038 Sum_probs=40.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEc
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVED----STIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGD----s~~Di~~A~~aG~~~v~v~ 278 (320)
|.++.+--|...++.++++ +++++.||| +.||++|.+.++..++.|.
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 4456677789999999988 589999999 8999999999888777775
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.3e-05 Score=80.27 Aligned_cols=120 Identities=18% Similarity=0.098 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC----------------------CCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV----------------------PRK 233 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~----------------------~~~ 233 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+... +++++++ -..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN-----IYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 6899999999999999999999999999999999999977431 1111111 011
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEE 303 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~ 303 (320)
+-.|+--..+.+.++-.-+.+.|+||+.||..+.+.|.+...+ +...+-.++.||.++- ++..+...
T Consensus 517 r~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm---~~gtdvAkeaADivLl~d~l~~I~~a 585 (755)
T TIGR01647 517 EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV---AGATDAARSAADIVLTEPGLSVIVDA 585 (755)
T ss_pred ecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe---cCCcHHHHHhCCEEEEcCChHHHHHH
Confidence 1223333444444444456689999999999999999977555 4455555677888753 34444433
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=69.47 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=39.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEcC
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVED----STIGLAAAKAAGMKCIVTKS 279 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGD----s~~Di~~A~~aG~~~v~v~~ 279 (320)
|.+..+--|..+++.++ +++++++||| +.||++|.+.-|+.++-|.+
T Consensus 182 Di~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 182 DVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 44566777788887776 8999999999 69999999999999887653
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=6e-05 Score=62.90 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=58.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH----HHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA----VTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~----~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..+.||+.|+++..-++|..|..+||..... ...-|+..|+.......-++- ...|++..-++.+.+ .
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk----k~~k~Ke~R~~~v~k----~ 192 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK----KDKKSKEVRRQAVEK----D 192 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe----eCCCcHHHHHHHHhh----c
Confidence 5678999999999999999999999986554 445566665554444322232 234666666666555 3
Q ss_pred CCcEEEEecCHhhHHH
Q 020874 251 PSSCVVVEDSTIGLAA 266 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~ 266 (320)
..-++.|||+..|...
T Consensus 193 ~~iVm~vGDNl~DF~d 208 (274)
T COG2503 193 YKIVMLVGDNLDDFGD 208 (274)
T ss_pred cceeeEecCchhhhcc
Confidence 3448899999987643
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.5e-05 Score=67.79 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=66.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.++||+.++|+.|+++|++++++||++... ....|+.+|....++ .++++.. .....++..+....
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~--~I~ts~~---------~~~~~l~~~~~~~~ 112 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEE--EIFSSSF---------AAAAYLKSINFPKD 112 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEeehHH---------HHHHHHHhhccCCC
Confidence 457999999999999999999999988443 344456666543343 5555532 44455566565555
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEE
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
+.|+|+++..+.+.++.+|+.++.
T Consensus 113 ~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 113 KKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CEEEEEcCHHHHHHHHHCCCEEec
Confidence 579999999999999999998775
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=9.5e-05 Score=73.95 Aligned_cols=71 Identities=13% Similarity=-0.070 Sum_probs=53.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+.+--|..+++.+++ +.+++.+++|||+.||..|.+.++.....+.-|+. ...|++++++.+|+...|..+
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~eV~~~L~~l 723 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQREVRELLRRL 723 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHHHHHHHHHH
Confidence 455668999999988 77888999999999999999998533333333543 246889999988866655544
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.5e-05 Score=74.67 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.||+...++.|+++|++++++|+.+...++.+.+++| ++ .+-++..+..| .+.++.+.+ ....+.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~---~V~aev~P~~K--~~~Ik~lq~----~~~~Va 789 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----ID---NVYAEVLPEQK--AEKIKEIQK----NGGPVA 789 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cc---eEEeccCchhh--HHHHHHHHh----cCCcEE
Confidence 578999999999999999999999999999999999986 32 33344444444 445554433 346799
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
||||+.||-.+...|.+.-.. +.+.+-..+.||+++ +++.+++..+
T Consensus 790 MVGDGINDaPALA~AdVGIai---g~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVGIAI---GAGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred EEeCCCCccHHHHhhccceee---ccccHHHHhhCCEEEEccchhhhHHHH
Confidence 999999999999888765444 444555556788763 5555555443
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00021 Score=56.62 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=57.1
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHH---HHHHHHh--cCcccccceeEEeCC--------CCCCCCCCHHHHHHHH
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAV---TAIVSFL--LGPERAEKIQIFAGD--------VVPRKKPDPAIYTLAA 244 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~---~~~l~~~--~~~~~~~~~~i~~~d--------~~~~~KP~~~~~~~~~ 244 (320)
.+|+.++.+.++++|+++..+|..+.-.. +..|+.+ .+..+.+...+++.+ ++-.. +|+.|+..+
T Consensus 29 h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~--~p~~fK~~~ 106 (157)
T PF08235_consen 29 HPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISK--DPEEFKIAC 106 (157)
T ss_pred hhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhcccccc--ChHHHHHHH
Confidence 49999999999999999999999875443 3344443 112333332233322 22223 444444332
Q ss_pred -----HHcCCCCC-cEEEEecCHhhHHHHHHcCCe
Q 020874 245 -----STLGVDPS-SCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 245 -----~~~g~~~~-~~v~VGDs~~Di~~A~~aG~~ 273 (320)
..+..... =...+|+..+|+.+=+++|++
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 22221111 134679999999999999997
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0002 Score=65.27 Aligned_cols=71 Identities=15% Similarity=0.041 Sum_probs=53.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEecCHhhHHHHHHc-----CCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 233 KKPDPAIYTLAASTLGVDPSS---CVVVEDSTIGLAAAKAA-----GMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~---~v~VGDs~~Di~~A~~a-----G~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
+--|...++++++.+|+...+ .++|||..+|..|.+.+ |+. |.+. +... ...|.+.+++.+|+.+.|
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vg--n~~~--~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVS--SVPK--ESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEe--cCCC--CccceEEcCCHHHHHHHH
Confidence 456799999999999987653 38999999999999963 433 3333 2222 246899999999998888
Q ss_pred Hhhh
Q 020874 305 FDLA 308 (320)
Q Consensus 305 ~~~~ 308 (320)
..+.
T Consensus 374 ~~L~ 377 (384)
T PLN02580 374 KSLV 377 (384)
T ss_pred HHHH
Confidence 7665
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=4.8e-05 Score=60.83 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=61.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc-ccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~-~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..++||+.++|+.|++. +.++|+|++...++..+++.++.. .+|.. .+++.++.. .+.. +.+-..+|.+.+.
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~-ri~~rd~~~--~~~~---KdL~~i~~~d~~~ 129 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGD-RIISRDESG--SPHT---KSLLRLFPADESM 129 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeecc-EEEEeccCC--CCcc---ccHHHHcCCCccc
Confidence 67899999999999965 999999999999999999999666 36632 566666543 1111 1121346788899
Q ss_pred EEEEecCHhh
Q 020874 254 CVVVEDSTIG 263 (320)
Q Consensus 254 ~v~VGDs~~D 263 (320)
+|+|+|++.=
T Consensus 130 vvivDd~~~~ 139 (156)
T TIGR02250 130 VVIIDDREDV 139 (156)
T ss_pred EEEEeCCHHH
Confidence 9999999843
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.6e-05 Score=77.45 Aligned_cols=126 Identities=14% Similarity=0.106 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc----------------------ceeEEeCCCCC--
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE----------------------KIQIFAGDVVP-- 231 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~----------------------~~~i~~~d~~~-- 231 (320)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..-.. ...++++.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 678999999999999999999999999999999999887642110 00244443221
Q ss_pred ----------------CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC-CCcccccCCCeec
Q 020874 232 ----------------RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY-TAEEDFLNADAVF 294 (320)
Q Consensus 232 ----------------~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~-~~~~~~~~a~~vi 294 (320)
..+-.|+--.++.+.++-...-+.|+||+.||+.|.+.|.+...+ |. +.+-..+.||+++
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam---g~~G~~vak~aADivL 724 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM---GIAGSDVSKQAADMIL 724 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec---CCcccHHHHHhhceEE
Confidence 122233333334444433334688999999999999999976655 53 3444556789987
Q ss_pred cC--CCCChhhH
Q 020874 295 DC--IGDPPEER 304 (320)
Q Consensus 295 ~~--l~el~~~l 304 (320)
.+ |.-+...+
T Consensus 725 ~dd~f~~Iv~ai 736 (997)
T TIGR01106 725 LDDNFASIVTGV 736 (997)
T ss_pred ecCCHHHHHHHH
Confidence 65 55555443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00065 Score=68.57 Aligned_cols=72 Identities=13% Similarity=0.004 Sum_probs=54.7
Q ss_pred CCCCCCHHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcCC-------------eEEEEcCCCCCcccccCCCeec
Q 020874 231 PRKKPDPAIYTLAAS---TLGVDPSSCVVVEDSTIGLAAAKAAGM-------------KCIVTKSSYTAEEDFLNADAVF 294 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~---~~g~~~~~~v~VGDs~~Di~~A~~aG~-------------~~v~v~~g~~~~~~~~~a~~vi 294 (320)
+.+--|...++.+++ .+|..++.+++|||+.||..|.+.++- -+|-| |.. ...|.+.+
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V--G~~----~S~A~y~L 831 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV--GQK----PSKAKYYL 831 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE--CCC----CccCeEec
Confidence 455667888888875 468999999999999999999998862 22333 321 24688899
Q ss_pred cCCCCChhhHHhhh
Q 020874 295 DCIGDPPEERFDLA 308 (320)
Q Consensus 295 ~~l~el~~~l~~~~ 308 (320)
++.+|+.+.|..+.
T Consensus 832 ~d~~eV~~lL~~L~ 845 (854)
T PLN02205 832 DDTAEIVRLMQGLA 845 (854)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999988877766
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=74.03 Aligned_cols=130 Identities=18% Similarity=0.109 Sum_probs=87.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC----------------CCCCCHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP----------------RKKPDPA 238 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~----------------~~KP~~~ 238 (320)
-++.++++++++.|++.|+++.++|+.+...+..+-+++|...-.....++++.+.. ..+-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 478999999999999999999999999999999999999754433201255554432 1222344
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
--.++.+.++-.-.-+.|.||+.||..|.+.|.+...+.. .+.+..++.+|.+ -.+|-...+.+.+
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~--~Gtdaak~Aadiv--l~dd~~~~i~~av 691 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG--EGTDAAKEAADIV--LLDDNFATIVLAV 691 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc--cHHHHHHhhcceE--eecCcHHHHHHHH
Confidence 4444455554454567899999999999999997775532 3344444567665 3344444444444
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0017 Score=51.15 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=61.7
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC-cccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~-~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~ 256 (320)
..++...|..++++ .+++.+|....+..+..-..+.. ...++...+++. ..| -.+.+..+++ ++
T Consensus 74 ~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~----h~K------V~~vrth~id----lf 138 (194)
T COG5663 74 AQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL----HHK------VEAVRTHNID----LF 138 (194)
T ss_pred HHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc----ccc------chhhHhhccC----cc
Confidence 47788888999887 78888888766554444333311 223342233322 223 2345667775 88
Q ss_pred EecCH-hhHHHHHHcCCeEEEEcCCCCCcc
Q 020874 257 VEDST-IGLAAAKAAGMKCIVTKSSYTAEE 285 (320)
Q Consensus 257 VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~ 285 (320)
+.|+. |=++.|+++|++.+.++..++...
T Consensus 139 ~ed~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 139 FEDSHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred ccccCchHHHHHHhcCCcEEEecCcccccc
Confidence 99998 788889999999999998777654
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0012 Score=51.11 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.1
Q ss_pred CCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCc
Q 020874 249 VDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAE 284 (320)
Q Consensus 249 ~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~ 284 (320)
..+.+++||||.. +|+.+|...|-..||+..|-...
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 5789999999999 89999999999999998876543
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00025 Score=54.26 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=25.1
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAV 206 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~ 206 (320)
+.+++.+.|+.|+++|+.++++|+.+....
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 458888999999999999999999876543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00011 Score=61.49 Aligned_cols=48 Identities=17% Similarity=0.130 Sum_probs=43.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
..+.+.+|+..++.+++++|++++++++|||+.||+.+++.+|+..++
T Consensus 157 v~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 157 VLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 346788999999999999999999999999999999999999987653
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00076 Score=61.91 Aligned_cols=88 Identities=19% Similarity=0.194 Sum_probs=71.8
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC----CCCCCCHHHHHHHHHHcCCCCCc
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV----PRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~----~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
|-...+.+..|+++|+-++|+|-++.+.+..+++.+. + .++.-+++ -.+.|+.+-++.+++++|+..+.
T Consensus 257 fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~--MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dS 329 (574)
T COG3882 257 FKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----D--MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDS 329 (574)
T ss_pred HHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----C--eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccc
Confidence 4556688899999999999999999888888888762 1 23333322 36889999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCC
Q 020874 254 CVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~ 272 (320)
.||++|++...+--++-+-
T Consensus 330 mvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 330 MVFIDDNPAERELVKRELP 348 (574)
T ss_pred eEEecCCHHHHHHHHhcCc
Confidence 9999999988888887764
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00064 Score=61.26 Aligned_cols=72 Identities=17% Similarity=-0.007 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHcCCCCC---cEEEEecCHhhHHHHHHcCC----eEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 233 KKPDPAIYTLAASTLGVDPS---SCVVVEDSTIGLAAAKAAGM----KCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~---~~v~VGDs~~Di~~A~~aG~----~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.--|...++.+++.++..-. -.||+||..+|-.+.+.+.- -.|.|..+ . ....|.+.+++.+|+.+.|.
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~--~--k~T~A~y~L~dp~eV~~~L~ 342 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKY--A--KETNASYSLQEPDEVMEFLE 342 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccC--C--CCCcceEeCCCHHHHHHHHH
Confidence 34578999999999876532 27999999999888876521 13334321 1 12479999999999988887
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
.+.
T Consensus 343 ~L~ 345 (354)
T PLN02151 343 RLV 345 (354)
T ss_pred HHH
Confidence 665
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00025 Score=73.76 Aligned_cols=127 Identities=11% Similarity=0.065 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce---------------------------------
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI--------------------------------- 222 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 222 (320)
++.||+.+.++.|++.|++++++|+.+...+..+.+..++.......
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 68899999999999999999999998888777777666554321110
Q ss_pred ------eEEeCCCCC----------------------CCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCe
Q 020874 223 ------QIFAGDVVP----------------------RKKPDPAIYTLAASTLGVD-PSSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 223 ------~i~~~d~~~----------------------~~KP~~~~~~~~~~~~g~~-~~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
-++.++... ..+-.|.--..+.+.+.-. ...+.++||+.||+.|.++|.+.
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 122222110 0011111111122222112 45689999999999999999866
Q ss_pred EEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 274 CIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 274 ~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
. ++.+... ......||+++.++..|...+
T Consensus 791 I-gi~g~eg-~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 791 V-GISGKEG-MQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred e-EecChHH-HHHHHhhhhhhhhHHHHHHHH
Confidence 5 4432211 123357999998877666554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0081 Score=49.94 Aligned_cols=40 Identities=23% Similarity=0.188 Sum_probs=30.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~ 215 (320)
.++.||+.+.++.|.+. +.-+++|..-.+++....+.+|.
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence 67889999999999887 66666676666777777666654
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00026 Score=63.98 Aligned_cols=72 Identities=14% Similarity=-0.038 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHHHcCCCC---CcEEEEecCHhhHHHHHHcC----CeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 233 KKPDPAIYTLAASTLGVDP---SSCVVVEDSTIGLAAAKAAG----MKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~---~~~v~VGDs~~Di~~A~~aG----~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.--|...++.+++.+|... .-.||+||..+|-.+.+.+. --.|.| |... ....|.+.+++.+|+.+.|.
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V--G~~~--k~T~A~y~L~dp~eV~~fL~ 356 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV--SKFP--KDTDASYSLQDPSEVMDFLA 356 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE--CCCC--CCCcceEeCCCHHHHHHHHH
Confidence 3467899999999988653 34799999999988888763 123444 3221 12578999999999988877
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
.++
T Consensus 357 ~L~ 359 (366)
T PLN03017 357 RLV 359 (366)
T ss_pred HHH
Confidence 665
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=63.27 Aligned_cols=102 Identities=21% Similarity=0.170 Sum_probs=74.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.|++.+.++.|++.|++++++|+.+.......-+.++. + +. - .|+.-..+.+++.-....+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------~-~~----~--~p~~K~~~v~~l~~~g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------F-AR----V--TPEEKAALVEALQKKGRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------e-ec----c--CHHHHHHHHHHHHHCCCEEE
Confidence 6899999999999999999999999999998888888753 1 11 1 22222333443333336799
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
||||+.||..+.+.+++...+ + ....+|.++.+ +++..
T Consensus 411 ~vGDg~nD~~al~~Advgia~---~-----a~~~adivl~~-~~l~~ 448 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVGIAM---G-----AKAAADIVLLD-DNLST 448 (499)
T ss_pred EECCChhhHHHHHhCCCcccc---c-----hHHhCCeEEec-CCHHH
Confidence 999999999999999866333 2 34568988876 44443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00062 Score=66.42 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce--eEEeCCCCC----------------CCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI--QIFAGDVVP----------------RKKPD 236 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~--~i~~~d~~~----------------~~KP~ 236 (320)
-+|+|++.+.++.+++.|++|.++|+.+...+..+.+++|+....++. ..+++.++. ..+-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 368999999999999999999999999999999999998754433311 334443321 01122
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC-CCCcccccCCCeec
Q 020874 237 PAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS-YTAEEDFLNADAVF 294 (320)
Q Consensus 237 ~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g-~~~~~~~~~a~~vi 294 (320)
|..-.++.+.++-.-+=+-|-||+.||..+.+.|.+...| | .+.+-.++.+|.|+
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM---G~~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM---GISGTDVAKEASDMVL 718 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee---cCCccHhhHhhhhcEE
Confidence 3333344444443445577999999999999999976665 6 44555556677664
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0011 Score=61.90 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc---------ccccceeEEeCCC-----------------
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP---------ERAEKIQIFAGDV----------------- 229 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~---------~~~~~~~i~~~d~----------------- 229 (320)
..-|.+..+|+.||+.|.++.++||.+-..++..+..+.+. ++|| .|++.-.
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFD--vVIv~A~KP~FF~~~~pfr~vd~~ 260 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFD--VVIVDARKPGFFTEGRPFREVDTE 260 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCEC--EEEES--CCHHHCT---EEEEETT
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhhee--EEEEcCCCCcccCCCCceEEEECC
Confidence 34678999999999999999999999999999999998544 4566 4443210
Q ss_pred CCC---C------CCC----HHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHc-CCeEEEEcC
Q 020874 230 VPR---K------KPD----PAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAA-GMKCIVTKS 279 (320)
Q Consensus 230 ~~~---~------KP~----~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~a-G~~~v~v~~ 279 (320)
.+. . ++. .--...+++.+|+...+++||||+. .|+...+.. |+.++.|-.
T Consensus 261 ~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 261 TGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp TSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 010 0 000 0114556777899989999999999 799988886 999999754
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.057 Score=48.35 Aligned_cols=60 Identities=18% Similarity=0.096 Sum_probs=45.6
Q ss_pred cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 214 LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 214 ~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
++...|....|++.-.+ + |...|+++.+++|- .-.-|+|||+...-.+|++..|+++-+.
T Consensus 392 gLg~~fpiENIYSa~ki--G--KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~ 451 (468)
T KOG3107|consen 392 GLGSSFPIENIYSATKI--G--KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRIS 451 (468)
T ss_pred hcCCcccchhhhhhhhc--c--HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeec
Confidence 44445544455555433 2 47889999999997 5567889999999999999999998775
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0018 Score=59.06 Aligned_cols=99 Identities=14% Similarity=0.199 Sum_probs=81.1
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCC--chHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTS--NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~--~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
+.....++.+++.++|.+|.++|+- +....+..|...|. + +..+.++.+.+....|-....|..+++.-++++..+
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~-d-~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGP-D-FNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCC-C-ccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 3445689999999999999999974 55556666666532 2 233368888888889999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEE
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVT 277 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v 277 (320)
+++||+. .|..++++.|+.+...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 9999999 6999999999988764
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=68.02 Aligned_cols=52 Identities=6% Similarity=-0.009 Sum_probs=37.5
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.-++++||+.||+.|.++|.+.. ++.+..+. .....+|+.|..|..|...|+
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~-qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGR-QAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhH-HHHHhhccchhhhHHHHHHHH
Confidence 45899999999999999997654 44322211 223479999999888776654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0037 Score=65.20 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=38.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999998774
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0011 Score=61.41 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=78.4
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~ 256 (320)
+-||++|-+++||++|++-+.+|+.++-....+.++.|..++.. ..||... ..+.++.+..-.=+-|
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA-----------eatPEdK--~~~I~~eQ~~grlVAM 514 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA-----------EATPEDK--LALIRQEQAEGRLVAM 514 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh-----------cCChHHH--HHHHHHHHhcCcEEEE
Confidence 56999999999999999999999999888888888876654432 2344332 3344555545556789
Q ss_pred EecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 257 VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
.||+.||..+..+|.+...| ..+....++.++.| +++--+..|++.+
T Consensus 515 tGDGTNDAPALAqAdVg~AM---NsGTqAAkEAaNMV--DLDS~PTKlievV 561 (681)
T COG2216 515 TGDGTNDAPALAQADVGVAM---NSGTQAAKEAANMV--DLDSNPTKLIEVV 561 (681)
T ss_pred cCCCCCcchhhhhcchhhhh---ccccHHHHHhhccc--ccCCCccceehHh
Confidence 99999999999999876665 33444444455554 4444444444443
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0069 Score=50.10 Aligned_cols=91 Identities=13% Similarity=0.147 Sum_probs=56.8
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccc--ccceeEEeCC--------CCC--CCCCCHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER--AEKIQIFAGD--------VVP--RKKPDPAIYTLAA 244 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~--~~~~~i~~~d--------~~~--~~KP~~~~~~~~~ 244 (320)
..|++.++|+.+.+. +.|+|-|.....+++.++..++.... +....+.... ..+ .-|+ +..+-
T Consensus 46 kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~lw 120 (195)
T TIGR02245 46 MRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGVIW 120 (195)
T ss_pred eCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHHhh
Confidence 369999999999994 99999999999999999998854321 1100111111 001 1232 22222
Q ss_pred HHcC--CCCCcEEEEecCHhhHHHHHHcCC
Q 020874 245 STLG--VDPSSCVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 245 ~~~g--~~~~~~v~VGDs~~Di~~A~~aG~ 272 (320)
+++| .+.+++|+|+|++.....=-.-|+
T Consensus 121 ~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i 150 (195)
T TIGR02245 121 ALLPEFYSMKNTIMFDDLRRNFLMNPQNGL 150 (195)
T ss_pred hhcccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence 3454 377899999999965443333343
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0015 Score=53.96 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=24.1
Q ss_pred HHHHHHHHcC-CCCCc-EEEEecCHhhHHHHHHcCCeEEE
Q 020874 239 IYTLAASTLG-VDPSS-CVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 239 ~~~~~~~~~g-~~~~~-~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
....+++.+. ....+ ++-+||++||+.+.......++.
T Consensus 195 Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV 234 (274)
T COG3769 195 AANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIV 234 (274)
T ss_pred HHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheee
Confidence 3344444332 23344 78999999999998776655543
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0028 Score=62.07 Aligned_cols=114 Identities=19% Similarity=0.206 Sum_probs=78.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC------------------CCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP------------------RKKPD 236 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~------------------~~KP~ 236 (320)
-+++||+.+.++.++..|++|-.+|+.+-..++.+..+.|+....++..++.+.++. +.-|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 468999999999999999999999999988888888888665544432334443321 12222
Q ss_pred HH-HHHHHHHHcCCCCCcEEEE-ecCHhhHHHHHHcCCeEEEEcCCC-CCcccccCCCeecc
Q 020874 237 PA-IYTLAASTLGVDPSSCVVV-EDSTIGLAAAKAAGMKCIVTKSSY-TAEEDFLNADAVFD 295 (320)
Q Consensus 237 ~~-~~~~~~~~~g~~~~~~v~V-GDs~~Di~~A~~aG~~~v~v~~g~-~~~~~~~~a~~vi~ 295 (320)
.. .+-+.++ ...++|.| ||+.||-.+.++|.+...| |- +.+-.++.+|.++-
T Consensus 726 DK~lLVk~L~----~~g~VVAVTGDGTNDaPALkeADVGlAM---GIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 726 DKHLLVKGLI----KQGEVVAVTGDGTNDAPALKEADVGLAM---GIAGTEVAKEASDIIIL 780 (1034)
T ss_pred hHHHHHHHHH----hcCcEEEEecCCCCCchhhhhcccchhc---cccchhhhhhhCCeEEE
Confidence 21 1222222 33567766 9999999999999988776 32 33444567888763
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0035 Score=52.42 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL 213 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~ 213 (320)
+.+.+.|+.|+++|++++++|+.....+...++.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 55667889999999999999999998888888764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.016 Score=51.19 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=68.2
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc---cccceeEEeCCCC----CCCCCCH-------------
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE---RAEKIQIFAGDVV----PRKKPDP------------- 237 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~---~~~~~~i~~~d~~----~~~KP~~------------- 237 (320)
.|....+|+.|+++|.++.++||.+...++.-.+.+-+.+ +||. .|+-++-- ...+|-.
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDV-VIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDV-VIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhhe-eEEecCCCcccccccCcchhhcccccchhhhh
Confidence 5788999999999999999999999988887777664433 4552 23322110 0111211
Q ss_pred -------HH-----HHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEE
Q 020874 238 -------AI-----YTLAASTLGVDPSSCVVVEDST-IGLAAAK-AAGMKCIVT 277 (320)
Q Consensus 238 -------~~-----~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~-~aG~~~v~v 277 (320)
.+ +...++.-|+...+++++||.. .|+.... .+|+++-.+
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 01 2334555678888999999999 7998877 889887654
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.03 Score=48.61 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=40.9
Q ss_pred eEEeCCCC----CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC---CeEEEEcCC
Q 020874 223 QIFAGDVV----PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG---MKCIVTKSS 280 (320)
Q Consensus 223 ~i~~~d~~----~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG---~~~v~v~~g 280 (320)
.+..+..+ +.+.-|...+.+++++...+..-+++.||..+|-.+...+. -.+|-+..+
T Consensus 166 ~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 166 RVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred EEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence 55555433 23344788899899888777667899999999988888876 445554444
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=50.53 Aligned_cols=81 Identities=20% Similarity=0.230 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC---------------------------
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP--------------------------- 231 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~--------------------------- 231 (320)
|.+.+.|..|++.|..+++=|-|+.+++..-++.+++..+|+ .+++++...
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd--~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~ 222 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFD--IIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT 222 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccE--EEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence 667788899999999999999999999999999999889988 666543210
Q ss_pred C--CCC-CHHHHHHHHHHcCCCC-CcEEEEecCH
Q 020874 232 R--KKP-DPAIYTLAASTLGVDP-SSCVVVEDST 261 (320)
Q Consensus 232 ~--~KP-~~~~~~~~~~~~g~~~-~~~v~VGDs~ 261 (320)
. +-| .|+.....+++.|+.. ..+..|+|=.
T Consensus 223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 0 012 3566667777777765 3445666655
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.02 Score=50.51 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=57.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchH---HHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~---~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.++||+.++|+.|+++|++++++||++.. .....++.+|.....+ .++++. ......+++.+....
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~ts~---------~~~~~~l~~~~~~~~ 86 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFSSA---------LCAARLLRQPPDAPK 86 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEecHH---------HHHHHHHHhhCcCCC
Confidence 45799999999999999999999997533 3334566665432222 444442 233444555434456
Q ss_pred cEEEEecCHhhHHHHHHcCCeEE
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCI 275 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v 275 (320)
+++++|+.. .....+..|+..+
T Consensus 87 ~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 87 AVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEEEEcCHH-HHHHHHHCCCEEe
Confidence 788999863 3455677888755
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.036 Score=53.48 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=35.0
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.++..|||+.||+.|.+.|.+. |++-+..+.. .--.||+.|..|..+.+.|+
T Consensus 782 krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQ-ASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 782 KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQ-ASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred ceEEEEcCCCccchheeecccc-eeeecccccc-cchhccccHHHHHHHHHHhh
Confidence 6789999999999999987644 2322122211 11368998888887776553
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.056 Score=46.25 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 020874 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271 (320)
Q Consensus 192 G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG 271 (320)
-++++|||..+....+++++.+..|..--+...|-+ +-+|.. +++.++- -+||+|...-++.|. .+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLg-----G~~K~~----vL~~~~p----hIFFDDQ~~H~~~a~-~~ 251 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLG-----GLPKGP----VLKAFRP----HIFFDDQDGHLESAS-KV 251 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhC-----CCchhH----HHHhhCC----CEeecCchhhhhHhh-cC
Confidence 589999998776666788887744433222233322 233343 3444443 499999999999999 88
Q ss_pred CeEEEEcCCCC
Q 020874 272 MKCIVTKSSYT 282 (320)
Q Consensus 272 ~~~v~v~~g~~ 282 (320)
++++.|.+|..
T Consensus 252 vps~hVP~gv~ 262 (264)
T PF06189_consen 252 VPSGHVPYGVA 262 (264)
T ss_pred CCEEeccCCcC
Confidence 99999987754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0049 Score=49.36 Aligned_cols=84 Identities=20% Similarity=0.279 Sum_probs=57.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC-cccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~-~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
+.++||+.++|+.|.+. +.+++.|.+...+++.+++.+.. ..+|. .++..+.....+. .. .+-++.+|.+.++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~--~~~~r~~~~~~~~--~~-~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFS--RRLYRDDCTFDKG--SY-IKDLSKLGRDLDN 108 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEE--EEEEGGGSEEETT--EE-E--GGGSSS-GGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccc--ccccccccccccc--cc-ccchHHHhhcccc
Confidence 56789999999999776 99999999999999999999954 35565 6666554321111 00 1456666778899
Q ss_pred EEEEecCHhhH
Q 020874 254 CVVVEDSTIGL 264 (320)
Q Consensus 254 ~v~VGDs~~Di 264 (320)
+|+|+|++.-.
T Consensus 109 vvivDD~~~~~ 119 (159)
T PF03031_consen 109 VVIVDDSPRKW 119 (159)
T ss_dssp EEEEES-GGGG
T ss_pred EEEEeCCHHHe
Confidence 99999999643
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.023 Score=51.07 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=62.2
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCc--------hHHHHHHHHHhcCcccccceeEEeCCC-CCCCCCCHHHHHHHHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSN--------EKAVTAIVSFLLGPERAEKIQIFAGDV-VPRKKPDPAIYTLAAST 246 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~--------~~~~~~~l~~~~~~~~~~~~~i~~~d~-~~~~KP~~~~~~~~~~~ 246 (320)
.++|.+.+-|..|.+.|+.+++.||.. .......++..- ..+.-.+..+.... -..+||.--+++..++.
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~ 182 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGVPIQLLAAIIKGKYRKPSTGMWEFLKRL 182 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCCceEEeeeccCCcccCcchhHHHHHHHH
Confidence 456777788899999999999999742 222333333331 11111113333332 24799999999988876
Q ss_pred cCC----CCCcEEEEecC---------------HhhHHHHHHcCCeEE
Q 020874 247 LGV----DPSSCVVVEDS---------------TIGLAAAKAAGMKCI 275 (320)
Q Consensus 247 ~g~----~~~~~v~VGDs---------------~~Di~~A~~aG~~~v 275 (320)
.+- ......||||- ..|+.-|.++|+.+.
T Consensus 183 ~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 183 ENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred hhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 642 22344577662 358999999998764
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.079 Score=49.79 Aligned_cols=88 Identities=8% Similarity=-0.125 Sum_probs=50.7
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHh-cCcccccc------eeEEeCCCCCCCCCCHHH-HHHHHHHcCCCCCcEE
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEK------IQIFAGDVVPRKKPDPAI-YTLAASTLGVDPSSCV 255 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~-~~~~~~~~------~~i~~~d~~~~~KP~~~~-~~~~~~~~g~~~~~~v 255 (320)
.++..+..| +++++|..++.+++..++.+ |....... .+.+++-.. ++...+. ..++.+.+|- ....|
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g~-~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVD-ERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhCc-cCcee
Confidence 556667778 99999999999999999994 43322111 022222221 2222333 4445555663 34468
Q ss_pred EEecCHhhHHHHHHcCCeEEEE
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v 277 (320)
-+||+..|-.-..- |+-+++
T Consensus 177 g~~~~~~~~~f~~~--ck~~~~ 196 (498)
T PLN02499 177 GLGRISASSSFLSL--CKEQIH 196 (498)
T ss_pred cccCCcccchhhhh--CceEEe
Confidence 88888755554443 444444
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.038 Score=47.17 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=60.2
Q ss_pred HHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC----CCC----CCCCC---
Q 020874 167 MVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG----DVV----PRKKP--- 235 (320)
Q Consensus 167 ~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~----d~~----~~~KP--- 235 (320)
.+.+.+....+++|+.++++.|.++++++.|.|.+-...++.+|++.+ .+++...+++. |+- +..-|
T Consensus 81 ~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~--~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH 158 (246)
T PF05822_consen 81 EEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAG--VFHPNVKVVSNFMDFDEDGVLVGFKGPLIH 158 (246)
T ss_dssp HHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---
T ss_pred HHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcC--CCCCCeEEEeeeEEECCcceEeecCCCceE
Confidence 344444557899999999999999999999999999999999999973 34455556543 110 11111
Q ss_pred ----CHHHHHHHHHHc-CC-CCCcEEEEecCHhhHHHHHHc
Q 020874 236 ----DPAIYTLAASTL-GV-DPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 236 ----~~~~~~~~~~~~-g~-~~~~~v~VGDs~~Di~~A~~a 270 (320)
....+. -...+ .+ ...+++..||+..|+.||..+
T Consensus 159 ~~NKn~~~l~-~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 159 TFNKNESALE-DSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp TT-HHHHHHT-THHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred EeeCCccccc-CchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 111111 00111 22 346799999999999999777
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.075 Score=44.94 Aligned_cols=63 Identities=10% Similarity=-0.004 Sum_probs=50.3
Q ss_pred cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC
Q 020874 214 LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 214 ~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g 280 (320)
++..+|....|+++-.+ + |...|+++.+++|-+...-++|||+...-.+|+..+++++-|...
T Consensus 197 ~L~~~f~ieNIYSa~kv--G--K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 197 RLDTIFRIENVYSSIKV--G--KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred ccCCccccccccchhhc--c--hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 55566665566665443 3 478999999999987788899999999999999999999988643
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.034 Score=57.41 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=26.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK 204 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~ 204 (320)
-++-+||.+.++.|++.|+||+++|+...+
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~E 679 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQE 679 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHH
Confidence 368899999999999999999999985433
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.094 Score=50.29 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCc---hHHHHHHHHHh--cCcccccceeEEeCCC--------CCCCCCCH---HHHHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFL--LGPERAEKIQIFAGDV--------VPRKKPDP---AIYTL 242 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~---~~~~~~~l~~~--~~~~~~~~~~i~~~d~--------~~~~KP~~---~~~~~ 242 (320)
-||+++....+++||++..+|... ....+..|+.+ .+..+.+...+++.+. +-.+||+. +.+..
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~D 640 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTD 640 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHH
Confidence 688888899999999999999743 33445555554 2344555545555543 23566643 23333
Q ss_pred HHHHcCCCCCc-EEEEecCHhhHHHHHHcCCe
Q 020874 243 AASTLGVDPSS-CVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 243 ~~~~~g~~~~~-~v~VGDs~~Di~~A~~aG~~ 273 (320)
+.+.+.-+... ...||+..+|+-.=+.+|++
T Consensus 641 Ik~LF~p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 641 IKNLFPPSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHhcCCCCCceeeecCCCcccceeeeeecCC
Confidence 33444422222 34689999999999999997
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.15 Score=44.17 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=61.6
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCC---chHHHHHHHHHhcCcccccceeEEeCCCC-----CCCCCC-------HHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFAGDVV-----PRKKPD-------PAIYT 241 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~---~~~~~~~~l~~~~~~~~~~~~~i~~~d~~-----~~~KP~-------~~~~~ 241 (320)
++||+.++|+.|+++|++++++||+ +.......++.+|.....+ .++++... ...++. .+.+.
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~--~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~ 95 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLE--TVFTASMATADYMNDLKLEKTVYVIGEEGLK 95 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEeeHHHHHHHHHHhcCCCCEEEEEcChhHH
Confidence 4589999999999999999999984 4666677777776554333 56655311 111111 13355
Q ss_pred HHHHHcCCC----CCcEEEEecCH----hhHHHHH---HcCCeEEEEcC
Q 020874 242 LAASTLGVD----PSSCVVVEDST----IGLAAAK---AAGMKCIVTKS 279 (320)
Q Consensus 242 ~~~~~~g~~----~~~~v~VGDs~----~Di~~A~---~aG~~~v~v~~ 279 (320)
..++.+|+. ..+.|++|... .++..|. +.|+..+..+.
T Consensus 96 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~ 144 (249)
T TIGR01457 96 EAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNG 144 (249)
T ss_pred HHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECC
Confidence 666766743 23567776532 3443332 45888666553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.25 Score=42.06 Aligned_cols=123 Identities=11% Similarity=0.168 Sum_probs=76.3
Q ss_pred HHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHH
Q 020874 131 MTAYFNK-TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI 209 (320)
Q Consensus 131 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~ 209 (320)
|.+++.+ .++....+.....++++.+... ..+.+|..++.+.|+.+++++.+.|.+-...++.+
T Consensus 107 MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~---------------i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev 171 (298)
T KOG3128|consen 107 MEEWWTKSHELLIQGGFSKNAIDDIVAESN---------------IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEV 171 (298)
T ss_pred HHHHHhcccceeecCCcCHHHHHHHHHHhh---------------HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHH
Confidence 5555544 3444444555666655554432 34568999999999999999999999999999998
Q ss_pred HHHhcCcccccceeEEeC----CCCC----CCCC-------CHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 020874 210 VSFLLGPERAEKIQIFAG----DVVP----RKKP-------DPAIYTLAASTLG--VDPSSCVVVEDSTIGLAAAKAA 270 (320)
Q Consensus 210 l~~~~~~~~~~~~~i~~~----d~~~----~~KP-------~~~~~~~~~~~~g--~~~~~~v~VGDs~~Di~~A~~a 270 (320)
+++.++...+- .+++. ++.+ ..+| .-..++...+.+. -+..++++-||+..|+.||..+
T Consensus 172 ~~q~~~~~pn~--k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 172 TRQKLVLHPNV--KFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHHhccCccH--HhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 88875443321 22221 1111 1111 1112222233333 2456789999999999999765
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.14 Score=44.25 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=59.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh---cCcccccceeEEeCCCC-----CC--CC----CCHHHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVV-----PR--KK----PDPAIYT 241 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~---~~~~~~~~~~i~~~d~~-----~~--~K----P~~~~~~ 241 (320)
.++||+.++++.|+++|.++.++||+.........+++ |.. . ....++++... .. .+ .-...+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~-~-~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~ 94 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD-V-PDSVFYTSAMATADFLRRQEGKKAYVIGEGALI 94 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC-C-CHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHH
Confidence 45799999999999999999999998775555555544 332 1 12255555211 00 00 0112344
Q ss_pred HHHHHcCCC----CCcEEEEecCHh-h---HHHHH---HcCCeEEEEcCC
Q 020874 242 LAASTLGVD----PSSCVVVEDSTI-G---LAAAK---AAGMKCIVTKSS 280 (320)
Q Consensus 242 ~~~~~~g~~----~~~~v~VGDs~~-D---i~~A~---~aG~~~v~v~~g 280 (320)
..++..|+. ..++|+||...+ + +..|. ..|..++..+..
T Consensus 95 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D 144 (248)
T PRK10444 95 HELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD 144 (248)
T ss_pred HHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 455555543 235788886552 2 23232 347777776533
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.38 Score=48.84 Aligned_cols=88 Identities=9% Similarity=-0.074 Sum_probs=54.7
Q ss_pred eEEeCCCC----CCCCCCHHHHHHHHHHc------CCCCCcEEEEecCH-hhHHHHHHcCCeE-----------------
Q 020874 223 QIFAGDVV----PRKKPDPAIYTLAASTL------GVDPSSCVVVEDST-IGLAAAKAAGMKC----------------- 274 (320)
Q Consensus 223 ~i~~~d~~----~~~KP~~~~~~~~~~~~------g~~~~~~v~VGDs~-~Di~~A~~aG~~~----------------- 274 (320)
.+..+..+ +.+.-|+...+.+++++ +..++=++.+||.. .|=.|.+..+-..
T Consensus 662 ~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~ 741 (797)
T PLN03063 662 DVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKK 741 (797)
T ss_pred EEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcccccccccccccccccccccc
Confidence 45555432 34556789999999876 23456688999975 4666666554211
Q ss_pred -------------EEEcCCCCCcccccCCCeeccCCCCChhhHHhhhhccccc
Q 020874 275 -------------IVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSLL 314 (320)
Q Consensus 275 -------------v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~~~~~~~ 314 (320)
+.|+-|.. ...|.+.+++..|+.+.|..+.-.....
T Consensus 742 ~~~~~~~~~~~~~~~v~VG~~----~s~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 742 VSSNLVDLKGENYFSCAIGQA----RTKARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred ccccccccccCceEEEEECCC----CccCeecCCCHHHHHHHHHHHhccCccc
Confidence 22222321 2468899999999988887777544333
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.83 Score=47.26 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhcCcccccceeEEeC-----CCCCCCCCCHHHHHHHHHHcCCCCCcE-EEEecCHh-hHHHHHHcCCeEE
Q 020874 203 EKAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKKPDPAIYTLAASTLGVDPSSC-VVVEDSTI-GLAAAKAAGMKCI 275 (320)
Q Consensus 203 ~~~~~~~l~~~~~~~~~~~~~i~~~-----d~~~~~KP~~~~~~~~~~~~g~~~~~~-v~VGDs~~-Di~~A~~aG~~~v 275 (320)
...++..|+..++... .+++. |.++..-.+...++++..+||++.+++ |++||+.+ |.+....--.++|
T Consensus 923 v~elr~~Lr~~gLr~~----~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tv 998 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH----AVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTV 998 (1050)
T ss_pred HHHHHHHHHhCCCceE----EEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEE
Confidence 3456666666544332 23433 345666778999999999999999999 55999998 9887754444566
Q ss_pred EEcC
Q 020874 276 VTKS 279 (320)
Q Consensus 276 ~v~~ 279 (320)
.+++
T Consensus 999 i~~g 1002 (1050)
T TIGR02468 999 ILKG 1002 (1050)
T ss_pred EEec
Confidence 6664
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.083 Score=45.98 Aligned_cols=50 Identities=14% Similarity=0.130 Sum_probs=36.4
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchH---HHHHHHHHhcCcccccceeEEeC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAG 227 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~---~~~~~l~~~~~~~~~~~~~i~~~ 227 (320)
.++||+.++|+.|+++|++++++||++.. .....++.+|..--. ..++++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~--~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISE--DEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCH--HHeEcH
Confidence 36799999999999999999999997655 355666666543222 255554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.39 Score=44.05 Aligned_cols=92 Identities=15% Similarity=0.201 Sum_probs=51.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchH------HHHHHHHHhcCcccccceeEEeCC--------CCCCCCCCHHHHHH--
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEK------AVTAIVSFLLGPERAEKIQIFAGD--------VVPRKKPDPAIYTL-- 242 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~------~~~~~l~~~~~~~~~~~~~i~~~d--------~~~~~KP~~~~~~~-- 242 (320)
.||+.+-...-.+|++|..+|..+.- .-...+++- +..+.+...+.+.| ++-..||+ .|..
T Consensus 406 ~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQn-gykLpdgpviLspd~t~aal~relIlrkpE--~FKiay 482 (580)
T COG5083 406 NGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQN-GYKLPDGPVILSPDRTMAALYRELILRKPE--VFKIAY 482 (580)
T ss_pred cchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhc-CccCCCCCEeeccchhhhhhhhhhhhcChH--HHHHHH
Confidence 44455555556689999888865321 111222222 33344443444433 22245543 3333
Q ss_pred --HHHHcCCCCCcEE-EEecCHhhHHHHHHcCCe
Q 020874 243 --AASTLGVDPSSCV-VVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 243 --~~~~~g~~~~~~v-~VGDs~~Di~~A~~aG~~ 273 (320)
-++.+..++..-+ -||+..+|+..=.++|++
T Consensus 483 Lndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 483 LNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 2344555555444 789999999999999987
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=91.58 E-value=1.5 Score=37.48 Aligned_cols=85 Identities=15% Similarity=0.166 Sum_probs=49.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHH-hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~-~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
.++||+.+.|+.|+++|+++.++||+.... ....|.. ++...-.+ .++++.. ....++.++. ..
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits~~--------~~~~~l~~~~--~~ 81 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITSGS--------VTKDLLRQRF--EG 81 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeHHH--------HHHHHHHHhC--CC
Confidence 457999999999999999999999875333 3344444 33322222 4544432 1222222222 22
Q ss_pred CcEEEEecCHhhHHHHHHcCCe
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
..++++|.. ...+.++..|+.
T Consensus 82 ~~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 82 EKVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred CEEEEECCH-HHHHHHHHcCCc
Confidence 457777753 445556666754
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.45 Score=41.67 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=36.1
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~ 217 (320)
+.+++.++|+.|+++|++++++|+.+...+...++.+++..
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 34778899999999999999999999999999999986543
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.12 E-value=5.7 Score=32.78 Aligned_cols=28 Identities=21% Similarity=0.353 Sum_probs=18.6
Q ss_pred eEEEEeCCCccccCCccchHHHHHHHHHH
Q 020874 78 SALLFDCDGVLVDTEKDGHRISFNDTFKE 106 (320)
Q Consensus 78 k~viFDlDGTL~d~~~~~~~~a~~~~~~~ 106 (320)
.+++||+||||....... ..-+.+.+++
T Consensus 12 ~l~lfdvdgtLt~~r~~~-~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKV-TPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccC-CHHHHHHHHH
Confidence 489999999999876642 2234444443
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=90.46 E-value=0.51 Score=45.87 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=55.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC-cccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC-
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS- 252 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~-~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~- 252 (320)
++++|++.++|+++.+. +.+.|+|.+.+.++..+++-+.- ..+|. ..|++.++-+..|- .......|.
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~-dRIisrde~~~~kt--------~dL~~~~p~g 269 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFG-DRIISRDESPFFKT--------LDLVLLFPCG 269 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCcccc-ceEEEecCCCcccc--------cccccCCCCC
Confidence 67899999999999987 99999999999999999998832 23444 37888887443332 222223333
Q ss_pred --cEEEEecCHh
Q 020874 253 --SCVVVEDSTI 262 (320)
Q Consensus 253 --~~v~VGDs~~ 262 (320)
-+|+|+|+.+
T Consensus 270 ~smvvIIDDr~d 281 (635)
T KOG0323|consen 270 DSMVVIIDDRSD 281 (635)
T ss_pred CccEEEEeCccc
Confidence 3777777763
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.35 E-value=3.3 Score=36.79 Aligned_cols=90 Identities=13% Similarity=0.034 Sum_probs=52.6
Q ss_pred CCCChhHHHHHHHHHHcC-CeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC------CCC-C-CCCCCHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG------DVV-P-RKKPDPAIYTLAAS 245 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G-~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~------d~~-~-~~KP~~~~~~~~~~ 245 (320)
..++|||..+.+.|.+.| ..+..+||.+-. .-..|+++...+.|....++-. +.. . -.--|...+.-++.
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~-~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~ 273 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQ-LFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILR 273 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhH-hHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHH
Confidence 467899999999999887 899999997655 4445555533332222122211 000 0 01112333444555
Q ss_pred HcCCCCCcEEEEecCH-hhHHHH
Q 020874 246 TLGVDPSSCVVVEDST-IGLAAA 267 (320)
Q Consensus 246 ~~g~~~~~~v~VGDs~-~Di~~A 267 (320)
++ .-...|.|||+- .|.+.=
T Consensus 274 ~~--p~~kfvLVGDsGE~DpeIY 294 (373)
T COG4850 274 RY--PDRKFVLVGDSGEHDPEIY 294 (373)
T ss_pred hC--CCceEEEecCCCCcCHHHH
Confidence 44 345789999998 787643
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.16 E-value=2.8 Score=36.85 Aligned_cols=94 Identities=12% Similarity=0.069 Sum_probs=55.7
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh---cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~---~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.+.||+.+.++.|++.|-.+.++||++....+...+++ |... +....|+. |.-.+..+ +++......
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-v~e~~i~s--------sa~~~a~y-lk~~~~~~k 107 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-VKEENIFS--------SAYAIADY-LKKRKPFGK 107 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-cCcccccC--------hHHHHHHH-HHHhCcCCC
Confidence 56799999999999999999999999877766666554 2221 11112222 22222222 222233345
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEEEcCC
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~v~~g 280 (320)
.+.++|-.. =-+..+++|+.+.+....
T Consensus 108 ~Vyvig~~g-i~~eL~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 108 KVYVIGEEG-IREELDEAGFEYFGGGPD 134 (306)
T ss_pred eEEEecchh-hhHHHHHcCceeecCCCC
Confidence 666666443 223456778777765433
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.11 E-value=1.7 Score=43.33 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=35.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.++-|+.++.++.|.+.+++++.+|+.+.-.+..+.++++..
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 457899999999999999999999998877777777766443
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.68 E-value=1.2 Score=34.43 Aligned_cols=104 Identities=14% Similarity=0.217 Sum_probs=61.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC--chHHHHHHHHHhcCcccccce----eEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS--NEKAVTAIVSFLLGPERAEKI----QIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~--~~~~~~~~l~~~~~~~~~~~~----~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
+.+.|++.+.+++|.+. +.|+++|.. .......+.+.+ .++|.++ .++|+.- +
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl--~E~FPFi~~qn~vfCgnK-n----------------- 125 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWL--KEKFPFISYQNIVFCGNK-N----------------- 125 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHH--HHHCCCCChhhEEEecCC-C-----------------
Confidence 67889999999999987 899999865 445556666554 2333321 3444431 1
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 249 ~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
+-.. =++|+|++..++-.+ |++-..-...+..+.+ -..+.++.|..+.+++
T Consensus 126 ivka-DilIDDnp~nLE~F~--G~kIlFdA~HN~nenR----F~Rv~~W~e~eq~ll~ 176 (180)
T COG4502 126 IVKA-DILIDDNPLNLENFK--GNKILFDAHHNKNENR----FVRVRDWYEAEQALLE 176 (180)
T ss_pred eEEe-eEEecCCchhhhhcc--CceEEEecccccCccc----eeeeccHHHHHHHHHH
Confidence 1111 278999999888765 4443332222222222 2345666666655554
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=89.48 E-value=1.5 Score=39.56 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCChhHHHHHHHHHHc----CCeEEEEcCCc---hHHHHHHH-HHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHc
Q 020874 176 PLRPGVAKLIDQALEK----GVKVAVCSTSN---EKAVTAIV-SFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL 247 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~----G~~i~lvT~~~---~~~~~~~l-~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~ 247 (320)
.+.||+.++++.|+.+ |+++.++||+. .......+ +.+|..--.+ .++++. .....+++++
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~--~i~~s~---------~~~~~ll~~~ 84 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPL--QVIQSH---------SPYKSLVNKY 84 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHH--HHHhhh---------HHHHHHHHHc
Confidence 3479999999999998 99999999986 44333433 6664422111 333331 1234445554
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
+ ..+++||.+. -.+.++.+|+..+.
T Consensus 85 ~---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred C---CceEEEeChH-HHHHHHHcCCcccc
Confidence 3 2578888764 56777789988664
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=89.46 E-value=4.6 Score=36.78 Aligned_cols=43 Identities=19% Similarity=0.136 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHc----CCCCCcEEEEecCH-----hhHHHHHHcCCeEEEEcCC
Q 020874 236 DPAIYTLAASTL----GVDPSSCVVVEDST-----IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 236 ~~~~~~~~~~~~----g~~~~~~v~VGDs~-----~Di~~A~~aG~~~v~v~~g 280 (320)
|..+.+.+.+.+ ++.++++++|||-. ||.+ |+.+| .++||...
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP 401 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASP 401 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCH
Confidence 345666666666 89999999999976 4543 45555 67787653
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=89.10 E-value=0.94 Score=38.03 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=35.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.|...+.|+.|++.|++++++|+.+...+...++.++..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 34588899999999999999999999999999988888654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=88.91 E-value=1.1 Score=38.19 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=34.7
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.++..++|++|+++|++++++|+.+...+...+++++..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 467899999999999999999999999888899888653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=88.45 E-value=7.4 Score=33.45 Aligned_cols=100 Identities=8% Similarity=0.020 Sum_probs=66.9
Q ss_pred CCCChhHHHHHH---HHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLID---QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~---~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..++|+..++++ .|-+.|+.|.-+++.+... .+.|+..|-. -. +..-+.=-.+.+-.++..++.+++...+
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~-a~rLed~Gc~-aV--MPlgsPIGSg~Gl~n~~~l~~i~e~~~v-- 190 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPML-AKHLEDIGCA-TV--MPLGSPIGSGQGLQNLLNLQIIIENAKI-- 190 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHH-HHHHHHcCCe-EE--eeccCcccCCCCCCCHHHHHHHHHcCCC--
Confidence 457787777774 5567799999999977654 4445554321 11 0111111124566788999998886654
Q ss_pred CcEEEEecCH---hhHHHHHHcCCeEEEEcCCCC
Q 020874 252 SSCVVVEDST---IGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 252 ~~~v~VGDs~---~Di~~A~~aG~~~v~v~~g~~ 282 (320)
-|+||-+. .|+..|-+.|+..|+++.+-.
T Consensus 191 --pVivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 191 --PVIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred --cEEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 37777555 799999999999999987644
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=88.28 E-value=1.2 Score=37.48 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+...++|+.|+++|++++++||.+...+...++.+++.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34779999999999999999999999999999998654
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.10 E-value=1.2 Score=37.61 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=34.8
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.|...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 4578889999999999999999999999888888888654
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.8 Score=37.64 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=35.0
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 4477789999999999999999999999999899888653
|
|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=88.00 E-value=9.5 Score=32.67 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=64.2
Q ss_pred CCCChhHHHHHHHHHHc---CCeEEEEcCCchHHHHHHHHHhcCcccccce-eEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEK---GVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~---G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
-.++|+..++++..+.. |..+.-+++.+......+ ..+| ....... .-+++ +.+--+++.++.+.+..++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l-~~~G-~~~vmPlg~pIGs---g~Gi~~~~~I~~I~e~~~v- 176 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRL-EDAG-CAAVMPLGSPIGS---GQGLLNPYNLRIIIERADV- 176 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHcC-CCEeCCCCcCCCC---CCCCCCHHHHHHHHHhCCC-
Confidence 45789999999888777 999994445455444444 4443 2222100 11121 2344458899888776443
Q ss_pred CCcEEEEecC---HhhHHHHHHcCCeEEEEcCCCCC
Q 020874 251 PSSCVVVEDS---TIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 251 ~~~~v~VGDs---~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
-|++|-+ +.|+..|.+.|...|+++++-..
T Consensus 177 ---pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 177 ---PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 3666644 47999999999999999877553
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=87.97 E-value=7.9 Score=32.89 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=58.4
Q ss_pred CCCChhHHHHH---HHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC--CCCCCCHHHHHHHHHHcCC
Q 020874 175 LPLRPGVAKLI---DQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV--PRKKPDPAIYTLAASTLGV 249 (320)
Q Consensus 175 ~~~~pg~~e~l---~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~--~~~KP~~~~~~~~~~~~g~ 249 (320)
..++|+..+++ +.|.+.|+.|.-+++.+.. +.+.|+..|-. - ..-.+.-+ +.+--++..++.++++.++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v-~akrL~d~Gca-a----vMPlgsPIGSg~Gi~n~~~l~~i~~~~~v 176 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPV-LAKRLEDAGCA-A----VMPLGSPIGSGRGIQNPYNLRIIIERADV 176 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HH-HHHHHHHTT-S-E----BEEBSSSTTT---SSTHHHHHHHHHHGSS
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHH-HHHHHHHCCCC-E----EEecccccccCcCCCCHHHHHHHHHhcCC
Confidence 45678877776 4566789999999997765 44555555321 1 11122222 3566788999999999977
Q ss_pred CCCcEEEEecCH---hhHHHHHHcCCeEEEEcCC
Q 020874 250 DPSSCVVVEDST---IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 250 ~~~~~v~VGDs~---~Di~~A~~aG~~~v~v~~g 280 (320)
+ |+|+-+. .|...|-+.|+..|+++..
T Consensus 177 P----vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 177 P----VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp S----BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred c----EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 4 6666544 7999999999999999754
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=87.29 E-value=0.29 Score=39.00 Aligned_cols=16 Identities=38% Similarity=0.679 Sum_probs=13.0
Q ss_pred eEEEEeCCCccccCCc
Q 020874 78 SALLFDCDGVLVDTEK 93 (320)
Q Consensus 78 k~viFDlDGTL~d~~~ 93 (320)
|++|||+||||+....
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998664
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.26 E-value=1.6 Score=43.54 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=67.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc----ccc------------------ceeEEeCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE----RAE------------------KIQIFAGDVVPR 232 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~----~~~------------------~~~i~~~d~~~~ 232 (320)
-++...+.+.+..++..|+++..+|+........+.+..|+.. .+. +-.++.+.+.+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~- 667 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP- 667 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-
Confidence 3578889999999999999999999876666665555554211 000 00122222221
Q ss_pred CCCCHHHHHHHHHHcC------CC-------------CCcEE-EEecCHhhHHHHHHcCCeEEEEcCCCCC-cccccCCC
Q 020874 233 KKPDPAIYTLAASTLG------VD-------------PSSCV-VVEDSTIGLAAAKAAGMKCIVTKSSYTA-EEDFLNAD 291 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g------~~-------------~~~~v-~VGDs~~Di~~A~~aG~~~v~v~~g~~~-~~~~~~a~ 291 (320)
.-.++-+..+++... .+ ...+| +.||+.||-.+.+.|.+...+ |... +-.++.||
T Consensus 668 -~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM---GiaGSDvsKqAAD 743 (1019)
T KOG0203|consen 668 -DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM---GIAGSDVSKQAAD 743 (1019)
T ss_pred -ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee---ccccchHHHhhcc
Confidence 122444555554332 01 12344 559999999999999977666 4332 22335566
Q ss_pred ee
Q 020874 292 AV 293 (320)
Q Consensus 292 ~v 293 (320)
.+
T Consensus 744 mI 745 (1019)
T KOG0203|consen 744 MI 745 (1019)
T ss_pred eE
Confidence 54
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=86.93 E-value=1.6 Score=38.46 Aligned_cols=41 Identities=5% Similarity=0.015 Sum_probs=36.1
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~ 217 (320)
.++.+.+.|+.|+++|++++++|+.....+..+.+.++...
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 35668899999999999999999999999999999987653
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=86.72 E-value=1.6 Score=37.65 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=35.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 34578889999999999999999999998888888887544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=86.62 E-value=1.6 Score=38.06 Aligned_cols=41 Identities=10% Similarity=0.084 Sum_probs=35.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 34577889999999999999999999999999999888654
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=86.25 E-value=11 Score=33.85 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=65.4
Q ss_pred CCCChhHHHHHHHHHHc---CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEK---GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~---G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..++|+..++++..+.. |..+.++++.+..... .+..+|-.-.-.--.-+++ +.+-.+|+.++.+.+...+
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~-~l~~~g~~avmPl~~pIGs---g~gv~~p~~i~~~~e~~~v-- 250 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAK-RLEDAGAVAVMPLGAPIGS---GLGIQNPYTIRLIVEGATV-- 250 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHhcCCEEEeeccccccC---CCCCCCHHHHHHHHHcCCC--
Confidence 45778888888888777 9999555555555444 4444432100000011221 2334489999999987443
Q ss_pred CcEEEEecCH---hhHHHHHHcCCeEEEEcCCCC
Q 020874 252 SSCVVVEDST---IGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 252 ~~~v~VGDs~---~Di~~A~~aG~~~v~v~~g~~ 282 (320)
-|+||-+. .|+..|-+.|...|+++.+-.
T Consensus 251 --pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 251 --PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred --cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 47887665 799999999999999987754
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=86.24 E-value=1.8 Score=36.47 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=34.0
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~ 215 (320)
+.+...+.|+.|++.|++++++|+.+...+...++.++.
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 447778899999999999999999999988888888863
|
catalyze the same reaction as SPP. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=85.96 E-value=1.5 Score=37.51 Aligned_cols=38 Identities=13% Similarity=0.039 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHcCCC---CCcEEEEecCHhhHHHHHHcCCe
Q 020874 236 DPAIYTLAASTLGVD---PSSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~---~~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
|....+.++++++.. +.-++|+||..+|-.+.+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 566677777766654 66799999999999999987653
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=85.38 E-value=16 Score=31.35 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=63.0
Q ss_pred CCCChhHHHHHHHHHHc---CCeEEEEcCCchHHHHHHHHHhcCcccccce-eEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEK---GVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~---G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
-.++|+..++++..+.. |..+.-+++.+..... .+..+| ....... .-++++ .+--+++.++.+.+..++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak-~l~~~G-~~~vmPlg~pIGsg---~gi~~~~~i~~i~e~~~v- 176 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RLEEAG-CAAVMPLGAPIGSG---LGLLNPYNLRIIIEQADV- 176 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHcC-CCEeCCCCcCCCCC---CCCCCHHHHHHHHHhcCC-
Confidence 35678888888887776 9999934444444444 444443 2222110 111221 234458888888776543
Q ss_pred CCcEEEEecC---HhhHHHHHHcCCeEEEEcCCCCC
Q 020874 251 PSSCVVVEDS---TIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 251 ~~~~v~VGDs---~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
-|++|-+ +.|+..|.+.|...|+++++-..
T Consensus 177 ---pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 177 ---PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ---eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 3666644 47999999999999999887553
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.25 E-value=2.5 Score=43.52 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=32.5
Q ss_pred CCCChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHh
Q 020874 175 LPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFL 213 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~ 213 (320)
..+.|++.++|+.|.+. +..|+|+|+.+...++.++...
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 45668999999999775 7899999999998888887664
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.22 E-value=2 Score=37.27 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=34.7
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.|...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD 60 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 4577789999999999999999999998888888888644
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.17 E-value=2 Score=37.32 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=34.7
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 4477889999999999999999999999888888887654
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=84.35 E-value=2.5 Score=36.58 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+...+.|+.|+++|++++++|+.+...+...++.++..
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999998653
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=84.14 E-value=2.1 Score=36.29 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=36.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.|...+.|+.|+++|++++++|+.+...+...++.++..
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 35688999999999999999999999999999999987544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.44 E-value=2.7 Score=36.76 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=34.2
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~ 215 (320)
.+...+.|++|+++|++++++|+.+...+...++.++.
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 46677899999999999999999999999999999865
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.03 E-value=2.8 Score=36.35 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=36.5
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~ 217 (320)
+.+...+.|++++++|++++++|+.+...+...++.++...
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 35788899999999999999999999999999999997654
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.23 E-value=9.3 Score=29.08 Aligned_cols=87 Identities=8% Similarity=0.042 Sum_probs=53.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC-chHHHHHHHHHhcCcccccce---eEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLLGPERAEKI---QIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~-~~~~~~~~l~~~~~~~~~~~~---~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
...|+++...|..|+++|+.++++|++ ..+.+.+.|+.+....-+-.- ..++...++ ...+-..|..+-+..|..
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g-~gsklghfke~~n~s~~~ 121 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVG-DGSKLGHFKEFTNNSNSI 121 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeec-CcccchhHHHHhhccCcc
Confidence 577999999999999999999999986 455667777776443211100 000011111 111234456666666777
Q ss_pred CCcEEEEecCHh
Q 020874 251 PSSCVVVEDSTI 262 (320)
Q Consensus 251 ~~~~v~VGDs~~ 262 (320)
..+..++.|-..
T Consensus 122 ~k~~~~fdDesr 133 (144)
T KOG4549|consen 122 EKNKQVFDDESR 133 (144)
T ss_pred hhceeeeccccc
Confidence 777788887654
|
|
| >PRK05406 LamB/YcsF family protein; Provisional | Back alignment and domain information |
|---|
Probab=80.34 E-value=4.6 Score=34.62 Aligned_cols=130 Identities=22% Similarity=0.268 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCC--------------chHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTS--------------NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~--------------~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
.-+.+.++..+++|+.|+.-=+. +.+....++.+++...-+- -..+-.+..-||+...|..++
T Consensus 44 ~~M~~tv~lA~~~gV~IGAHPgypD~~gFGRR~m~~s~~el~~~v~yQigAL~~~a---~~~g~~l~hVKPHGALYN~~~ 120 (246)
T PRK05406 44 AVMRRTVRLAKENGVAIGAHPGYPDLEGFGRRNMDLSPEELYALVLYQIGALQAIA---RAAGGRVSHVKPHGALYNMAA 120 (246)
T ss_pred HHHHHHHHHHHHcCCeEccCCCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHcCCeeEEeCccHHHHHHHh
Confidence 34577888888889888874432 2333444444443222111 112234567899988877655
Q ss_pred HHc-----------CCCCCcEEEEecCHhhHHHHHHcCCeEEE---EcCCCCCcccc---cCCCeeccCCCCChhhHHhh
Q 020874 245 STL-----------GVDPSSCVVVEDSTIGLAAAKAAGMKCIV---TKSSYTAEEDF---LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 245 ~~~-----------g~~~~~~v~VGDs~~Di~~A~~aG~~~v~---v~~g~~~~~~~---~~a~~vi~~l~el~~~l~~~ 307 (320)
+.- .++++=.++.-.+..=.+.|+..|++.+. ..+.|.++..+ ..+..++.+.+++.+-.+++
T Consensus 121 ~d~~~a~av~~ai~~~~~~l~l~~~~~s~~~~~A~~~Gl~~~~E~FADR~Y~~dG~Lv~R~~~gAvi~d~~~v~~~~~~~ 200 (246)
T PRK05406 121 KDPALADAVAEAVAAVDPSLILVGLAGSELIRAAEEAGLRTASEVFADRAYTADGTLVPRSQPGAVIHDEEEAAAQVLQM 200 (246)
T ss_pred cCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEEEecCCcCCCCCCcCCCCCCCccCCHHHHHHHHHHH
Confidence 321 23565344443666788999999998765 55777777766 46888999998888888888
Q ss_pred hhcc
Q 020874 308 AFCG 311 (320)
Q Consensus 308 ~~~~ 311 (320)
+..+
T Consensus 201 ~~~g 204 (246)
T PRK05406 201 VQEG 204 (246)
T ss_pred HHcC
Confidence 7544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 320 | ||||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 6e-11 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 1e-10 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 3e-09 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 1e-08 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 1e-07 | ||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 2e-07 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 5e-07 | ||
| 2fdr_A | 229 | Crystal Structure Of Conserved Haloacid Dehalogenas | 8e-07 | ||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 9e-07 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 1e-06 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 9e-06 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 1e-05 | ||
| 2yy6_A | 213 | Crystal Structure Of The Phosphoglycolate Phosphata | 1e-04 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 1e-04 | ||
| 2b0c_A | 206 | The Crystal Structure Of The Putative Phosphatase F | 2e-04 | ||
| 2hi0_A | 240 | Crystal Structure Of Putative Phosphoglycolate Phos | 2e-04 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 3e-04 | ||
| 2hsz_A | 243 | Crystal Structure Of A Predicted Phosphoglycolate P | 8e-04 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-04 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 8e-04 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 8e-04 |
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229 | Back alignment and structure |
|
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
| >pdb|2B0C|A Chain A, The Crystal Structure Of The Putative Phosphatase From Escherichia Coli Length = 206 | Back alignment and structure |
|
| >pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Yp_619066.1) From Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc Baa-365 At 1.51 A Resolution Length = 240 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate Phosphatase (hs_0176) From Haemophilus Somnus 129pt At 1.90 A Resolution Length = 243 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 7e-51
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 25/233 (10%)
Query: 72 SASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM 131
S A +FD DG+L+D+E + D LGV L G + M
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPL-WDRAELDVMAS--LGVDISRRNE--LPDTLGLRIDM 58
Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK 191
P PS +E + +R + L+E+ PL PGV + + E+
Sbjct: 59 VVDLWYARQPWNGPSRQE--------VVERVIARAISLVEETR-PLLPGVREAVALCKEQ 109
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----IFAGDVVPRKKPDPAIYTLAASTL 247
G+ V + S S + ++ + + + + +P KP P +Y A+ L
Sbjct: 110 GLLVGLASASPLHMLEKVL------TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL 163
Query: 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA-EEDFLNADAVFDCIGD 299
GVDP +CV +EDS G+ A+KAA M+ IV + + F+ A+ + +
Sbjct: 164 GVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTE 216
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 4e-50
Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 62 MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
MS+R + +FD DG L D+ + ++ + + +
Sbjct: 1 MSLRPQT----------SFIFDLDGTLTDSVYQ-NVAAWKEALDA--ENIPLAMWRIHRK 47
Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
IG M ++ + +DE+ L ++ + + L + + PG
Sbjct: 48 --IGMSGGLMLKSLSR--ETGMSITDEQ-----AERLSEKHAQAYERLQHQ--IIALPGA 96
Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYT 241
+L++ ++ +K + ++ T + L I D V KPDP ++
Sbjct: 97 VELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSYGKPDPDLFL 154
Query: 242 LAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED--FLNADAVFD 295
AA +G C+V+ D+ + AA+ + S + A V++
Sbjct: 155 AAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE 210
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 7e-47
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 19/224 (8%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DGVL D+ H S++ K G + G ++
Sbjct: 25 AVLFDMDGVLFDSMP-NHAESWHKIMKR--FGFGLSREEAYMH--EGRTGASTINIVSRR 79
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
A +E + +++ KTE F + PG +++ + +G+ V
Sbjct: 80 ERGHDATEEEIKA------IYQAKTEEFNKCPK---AERMPGALEVLTKIKSEGLTPMVV 130
Query: 199 STS-NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
+ S + + G +A + V KP+P Y +A G P+ +V+
Sbjct: 131 TGSGQTSLLDRLNHNFPGIFQAN--LMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVI 188
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLN--ADAVFDCIGD 299
E++ +G+ A AAG+ I + + LN A+ +F + D
Sbjct: 189 ENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPD 232
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-46
Identities = 45/224 (20%), Positives = 89/224 (39%), Gaps = 32/224 (14%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DGVL DTEK + + G++ D IGG +++ +
Sbjct: 7 AIIFDMDGVLFDTEKY-YYDRRASFLGQ--KGISIDHLPPSFF--IGGNTKQVWENILRD 61
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
+ + ++L + + P V K++++ +G+++ +
Sbjct: 62 EYDKWDV----------STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLA 111
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIF-------AGDVVPRKKPDPAIYTLAASTLGVDP 251
S+S + + + E+ ++ +G+ KP+P IY A L V
Sbjct: 112 SSSVKADIFRAL---------EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQA 162
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295
S +++EDS G+AA AA ++ + + D A + D
Sbjct: 163 SRALIIEDSEKGIAAGVAADVEVWAIRDNEFG-MDQSAAKGLLD 205
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 1e-46
Identities = 43/219 (19%), Positives = 84/219 (38%), Gaps = 17/219 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DGVL ++ H +++ K G+ + G +
Sbjct: 26 AVLFDMDGVLFNSMP-YHSEAWHQVMKT--HGLDLSREEAYMH--EGRTGASTINIVFQR 80
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
++A +E E ++ K+ LF E PG +L+ + +G+ V
Sbjct: 81 ELGKEATQEEIES------IYHEKSILFNSYPE---AERMPGAWELLQKVKSEGLTPMVV 131
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
+ S + ++ + +++ + V KP+P Y +A G+ VV+E
Sbjct: 132 TGSGQLSLLERLEHNFPGMFHKEL-MVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIE 190
Query: 259 DSTIGLAAAKAAGMKCIVTKSSYTAEED--FLNADAVFD 295
++ +G+ A AG+ I + + AD +F
Sbjct: 191 NAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFP 229
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-46
Identities = 51/243 (20%), Positives = 91/243 (37%), Gaps = 34/243 (13%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
++FD DGV+ DT H ++ E +G++ D L G ++ +
Sbjct: 7 GVIFDLDGVITDTAH-LHFQAWQQIAAE--IGISIDAQFNESL--KGISRDESLRRILQH 61
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAV 197
G E + +E A L RK L++ + + + + PG+ L+ + + V +
Sbjct: 62 GGKEGDFNSQE-----RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDPAIYTLAASTLGVDPSS 253
S S +L E + F + KPDP I+ A + LGV P +
Sbjct: 117 ASVS------LNAPTIL--AALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQA 168
Query: 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAFCGSL 313
C+ +ED+ G+ A A+GM+ + + T A + +
Sbjct: 169 CIGIEDAQAGIDAINASGMRSVGIGAGLTG------AQLLLPSTES-----LTWPRLSAF 217
Query: 314 LQK 316
Q
Sbjct: 218 WQN 220
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 2e-46
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 27/236 (11%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A++FD DGV+ DT + H +++ ++ + + +D D+ L G +E
Sbjct: 4 AVIFDLDGVITDTAEY-HFLAWKHIAEQ--IDIPFDRDMNERL--KGISREESLESILIF 58
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
G E ++ E L RK + +LI K L PG+ +L+ Q + +K+ +
Sbjct: 59 GGAETKYTNAE-----KQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGL 113
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDPAIYTLAASTLGVDPSS 253
S+S +L R I F + + KPDP I+ AA+ L V P+
Sbjct: 114 ASSS------RNAPKIL--RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPAD 165
Query: 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLAF 309
C +ED+ G++A K+AGM + + L AD V D E +
Sbjct: 166 CAAIEDAEAGISAIKSAGMFAVG----VGQGQPMLGADLVVRQTSDLTLELLHEEW 217
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-45
Identities = 57/243 (23%), Positives = 90/243 (37%), Gaps = 42/243 (17%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DGV+ DT + H ++ +E +G+ + E LK G +E
Sbjct: 4 AVLFDLDGVITDTAE-YHFRAWKALAEE--IGINGVDRQFNEQLK-GVSREDSLQKILDL 59
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
+ S EE L KRK + ++ +I+ + PG+ +L+ +K+A+
Sbjct: 60 ADKK--VSAEE-----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIAL 112
Query: 198 CSTS-NEKAV----------TAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
S S N + AI V KP P I+ AA
Sbjct: 113 ASASKNGPFLLERMNLTGYFDAIAD---------------PAEVAASKPAPDIFIAAAHA 157
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306
+GV PS + +EDS G+ A K +G I ED + + E
Sbjct: 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIG----VGRPEDLGDDIVIVPDTSHYTLEFLK 213
Query: 307 LAF 309
+
Sbjct: 214 EVW 216
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 3e-44
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 22/256 (8%)
Query: 57 SSANPMSMRNVRVTCSASVLP--SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
SS + N+ A+ + L+FD DG+L+DTE+ + + F + +
Sbjct: 8 SSGVDLGTENLYFQSMAAPPQPVTHLIFDMDGLLLDTERL-YSVVFQEICNR--YDKKYS 64
Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
D+ + +G + P +EE L + +
Sbjct: 65 WDVKSLV--MGKKALEAAQIIIDVL---QLPMSKEE-------LVEESQTKLKEVFPT-- 110
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-VPRK 233
L PG KLI + G+ A+ ++S + S + D V
Sbjct: 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
Query: 234 KPDPAIYTLAASTLGVDPSS--CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD 291
KPDP I+ A P+ C+V ED+ G+ AA AAGM+ ++ + + A
Sbjct: 171 KPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKAT 230
Query: 292 AVFDCIGDPPEERFDL 307
V + + D E F L
Sbjct: 231 LVLNSLQDFQPELFGL 246
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-40
Identities = 61/249 (24%), Positives = 83/249 (33%), Gaps = 25/249 (10%)
Query: 54 RRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW 113
SS + N+ A+LFD DGVLV++E + E G+
Sbjct: 5 HHHSSGVDLGTENLYFQSMPDAPFDAVLFDLDGVLVESEGI-IAQVWQSVLAE--RGLHL 61
Query: 114 DVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK 173
D+ G + + AY D F+ L R
Sbjct: 62 DLTEIAMYF-TGQRFDGVLAYL-------AQQHDFVPPPDFLDVLETRFNAAM------T 107
Query: 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPR 232
+ G A+ + GV A+ S S + + + G E A + V R
Sbjct: 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGR 166
Query: 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI------VTKSSYTAEED 286
KP P +YT AA LG+ P CVV+EDS G AA AAG A
Sbjct: 167 GKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALS 226
Query: 287 FLNADAVFD 295
L A V
Sbjct: 227 RLGAARVLT 235
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 3e-39
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 30/233 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNK 137
++FDCDGVLVD+E + E G V+ GE G + + ++
Sbjct: 6 LIIFDCDGVLVDSEII-AAQVESRLLTE--AGYPISVEEMGERF-AGMTWKNILLQVESE 61
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
P + ++ + +L + +E+ + + GV + + +
Sbjct: 62 ASIPL--SASLLDKSE----------KLLDMRLERDV-KIIDGVKFALSRL---TTPRCI 105
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGD--VVPRKKPDPAIYTLAASTLGVDPSSCV 255
CS S+ + +++ +G + I++ R KP P I+ A+ GV P V
Sbjct: 106 CSNSSSHRLDMMLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVV 164
Query: 256 VVEDSTIGLAAAKAAGMKCIV---TKSSYTAEEDFL---NADAVFDCIGDPPE 302
VVEDS G+ A+AAGM+ I +Y + D L A+ V + D P
Sbjct: 165 VVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPA 217
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 4e-38
Identities = 49/253 (19%), Positives = 81/253 (32%), Gaps = 36/253 (14%)
Query: 52 VSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
++ M + T S+ +A LFD DG ++ ++ + D K+
Sbjct: 14 TTKANIQTIAMPLT----TKPLSLKINAALFDVDGTIIISQP-AIAAFWRDFGKD--KPY 66
Query: 112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
+ G A F P+ A + + L E +
Sbjct: 67 FDAEHVIHIS--HGWRTYDAIAKFA----PDFADEEYVNK------LEGEIPEKY----- 109
Query: 172 KKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
+ PG KL + K AV ++ L +R E + V
Sbjct: 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KIKRPE--YFITANDV 166
Query: 231 PRKKPDPAIYTLAASTLGV-------DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283
+ KP P Y + LG S VV ED+ G+AA KAAG K + +++
Sbjct: 167 KQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDL 226
Query: 284 EEDF-LNADAVFD 295
+ D +
Sbjct: 227 DFLKEKGCDIIVK 239
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 6e-34
Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 14/211 (6%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+ D G +D +F + FK+ G+ E +G K
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQ--EGIEVTQAEAREP--MGTEKSEHIRRMLGN 71
Query: 139 G-----WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
W E + I L+ + ++ ++ + PG ++ D+ + +G+
Sbjct: 72 SRIANAWLSIKGQASNE--EDIKRLYDLFAPIQTRIVAQRSQLI-PGWKEVFDKLIAQGI 128
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV-DPS 252
KV T + A + V R +P P + A L V +
Sbjct: 129 KVGGN-TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVN 187
Query: 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283
C+ V+D+ G+ AGM + S
Sbjct: 188 GCIKVDDTLPGIEEGLRAGMWTVGVSCSGNE 218
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-32
Identities = 36/236 (15%), Positives = 75/236 (31%), Gaps = 34/236 (14%)
Query: 62 MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD------- 114
M + A++F G VD F + F ++ + +T +
Sbjct: 1 MDRMKIE----------AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMG 50
Query: 115 ---VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
+D L ++ F + EE ++ + ++ R
Sbjct: 51 LLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI----- 105
Query: 172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
GV ++I E+G+K+ + + + + + + + D VP
Sbjct: 106 -------NGVKEVIASLRERGIKIGSTTGYTREMMDIVAK-EAALQGYKPDFLVTPDDVP 157
Query: 232 RKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
+P P + A LGV P + + V D+ + + AGM + +
Sbjct: 158 AGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGL 213
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-31
Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 27/219 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG L +++ + + ++ MT +
Sbjct: 6 ALMFDIDGTLTNSQPAYTT-VMREVLATYGKPFS-PAQAQKTF--PMAAEQAMT----EL 57
Query: 139 GWPEKAPSDEEERKQFIASL--HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
G + + Q+ + H + EL+ PG+ L + L +++
Sbjct: 58 GIAA--SEFDHFQAQYEDVMASHYDQIELY------------PGITSLFE-QLPSELRLG 102
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
+ ++ + + + R + D P++KPDP A + V P + +
Sbjct: 103 IVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRKPDPLPLLTALEKVNVAPQNALF 160
Query: 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295
+ DS A+AA + + D F
Sbjct: 161 IGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ 199
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-31
Identities = 45/254 (17%), Positives = 86/254 (33%), Gaps = 36/254 (14%)
Query: 55 RTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
+ P SM+ A++FD L+DT + R +F + +G
Sbjct: 13 EAQTQGPGSMKQPT----------AVIFDWYNTLIDTSINIDRTTFYQVLDQ--MGYKN- 59
Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
+DL + + + + K +E + SL K +
Sbjct: 60 IDL--DSIPNSTIPKYLITLLGK--------RWKEATILYENSLEKS--------QKSDN 101
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
L G +L+D E + +A+ S N + + + + + I K
Sbjct: 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGTIK 159
Query: 235 PDPAIYTLAASTLGVDPS-SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAV 293
P P A + + ++PS + DS + +A AG I S+ +D L+
Sbjct: 160 PSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKN- 217
Query: 294 FDCIGDPPEERFDL 307
F I + + ++
Sbjct: 218 FYDIRNFICQLINI 231
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-26
Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 32/210 (15%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
++D G L+D + +F +T G+T D D + + F
Sbjct: 8 DYIWDLGGTLLDNYETSTA-AFVETLAL--YGITQDHDSVYQA--LKVSTPFAIETF--- 59
Query: 139 GWPEKAPSDEEERKQFIA--SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
AP+ E +++ + LF GV+ L++ +G +
Sbjct: 60 -----APNLENFLEKYKENEARELEHPILF------------EGVSDLLEDISNQGGRHF 102
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
+ S N++ + + + ++ ++KP+P + +V
Sbjct: 103 LVSHRNDQVLEILEKTSIAA-YFT--EVVTSSSGFKRKPNPESMLYLREKYQISS--GLV 157
Query: 257 VEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
+ D I + A +AAG+ + S +
Sbjct: 158 IGDRPIDIEAGQAAGLDTHLFTSIVNLRQV 187
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-26
Identities = 43/227 (18%), Positives = 72/227 (31%), Gaps = 28/227 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
LFD D L D+ + F + D+ IG E
Sbjct: 8 VYLFDFDYTLADSSRGIVT-CFRSVLERHGYT-GITDDMIKRT--IGKTLEESF----SI 59
Query: 139 GWPEKAPSDEEE-RKQFIA---SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
E R+++ T LF P + ++G++
Sbjct: 60 LTGITDADQLESFRQEYSKEADIYMNANTILF------------PDTLPTLTHLKKQGIR 107
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254
+ + ST + + + + + + I G+ V KPDP LA L P
Sbjct: 108 IGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165
Query: 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGD 299
+ + DST+ A AAG+ S T ++F D + +G
Sbjct: 166 LYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQ 212
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 5e-26
Identities = 36/241 (14%), Positives = 66/241 (27%), Gaps = 48/241 (19%)
Query: 62 MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
MS+ ++ +FD DG L D I + L + + D+ L
Sbjct: 1 MSLSEIK----------HWVFDMDGTLTIAVHDFAAI-------REALSIPAEDDILTHL 43
Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
P + + + + PG
Sbjct: 44 ----------------AALPADESAAKHAWLLEHERDLAQGSRPA------------PGA 75
Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYT 241
+L+ + +G ++ + T N + + + +G G KP P
Sbjct: 76 VELVRELAGRGYRLGIL-TRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLL 134
Query: 242 LAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP 301
A V PS V+V D L +AAG + ++ + D
Sbjct: 135 KLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPEL--TDWHARDCAQLR 192
Query: 302 E 302
+
Sbjct: 193 D 193
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 8e-26
Identities = 51/220 (23%), Positives = 76/220 (34%), Gaps = 28/220 (12%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
+LFD DG L+D+ KD + T KE L + D + IGGG + +
Sbjct: 5 VILFDLDGTLIDSAKDIAL-ALEKTLKELGLE-EYYPDNVTKY--IGGGVRALL----EK 56
Query: 139 GWPEKAPSDEEERKQFI---ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
+ EE + F T+ + P + ++ KG K+
Sbjct: 57 VLKD--KFREEYVEVFRKHYLENPVVYTKPY------------PEIPYTLEALKSKGFKL 102
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
AV S E+ I+ L + I GD KKP P LG +P +
Sbjct: 103 AVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKKPSPTPVLKTLEILGEEPEKAL 160
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295
+V D+ + A K AG K + Y D
Sbjct: 161 IVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS 199
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-25
Identities = 31/212 (14%), Positives = 74/212 (34%), Gaps = 30/212 (14%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK--IGGGKERMTAYFN 136
A ++D DG L+D+ + +TF + + +D + ++ + + +
Sbjct: 6 AFIWDLDGTLLDS-YEAILSGIEETFAQ--FSIPYDKE---KVREFIFKYSVQDLLVRV- 58
Query: 137 KTGWPEKAPSDE--EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
++ E + + + + L PG +++ A E G++
Sbjct: 59 ---AEDRNLDVEVLNQVRAQSLAEKNAQVVLM------------PGAREVLAWADESGIQ 103
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254
+ + A T + + E I +KP P T ++ +
Sbjct: 104 QFIYTHKGNNAFTILKDLGVESYFTE---ILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 160
Query: 255 VVVEDSTIGLAAAKAAGMKCI-VTKSSYTAEE 285
+ D T+ + A+ +G++ I +S+Y
Sbjct: 161 YYIGDRTLDVEFAQNSGIQSINFLESTYEGNH 192
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-24
Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM--TAY 134
+ FD DG LV++ D S N K+ L +L IG G + + A
Sbjct: 23 FKLIGFDLDGTLVNSLPDLAL-SINSALKDVNLP-QASENLVMTW--IGNGADVLSQRAV 78
Query: 135 FNKTGWPEKAPSDEEE---RKQFIASLHK---RKTELFMVLIEKKLLPLRPGVAKLIDQA 188
EK +++E ++QF + + L+ P V + ++
Sbjct: 79 DWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLY------------PNVKETLEAL 126
Query: 189 LEKGVKVAVCSTSN--EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAAST 246
+G +AV + N K V I++ ++ G +P KP PA +
Sbjct: 127 KAQGYILAVVT--NKPTKHVQPILTAFGIDHLFS--EMLGGQSLPEIKPHPAPFYYLCGK 182
Query: 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFD 295
G+ P + V DS + AA +AG + Y D +FD
Sbjct: 183 FGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD 233
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 6e-24
Identities = 46/234 (19%), Positives = 79/234 (33%), Gaps = 22/234 (9%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKIGGGKERMTAY 134
+ +LFD DG L+ E R D E G T D G++ G +
Sbjct: 4 RTLVLFDIDGTLLKVESMNRR-VLADALIEVYGTEGSTGSHDFSGKM--DGAIIYEV--- 57
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-V 193
+ G E + LF ++ + L GV +L+D + V
Sbjct: 58 LSNVGLER------AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDV 111
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL---GVD 250
+ + + + E + + L G + FA D + P I A +
Sbjct: 112 LLGLLTGNFEASGRHKLK-LPGIDHYFPFGAFA-DDALDRNELPHIALERARRMTGANYS 169
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCI-VTKSSYTAEE-DFLNADAVFDCIGDPPE 302
PS V++ D+ + A+ + I V ++T EE +F + E
Sbjct: 170 PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 7e-24
Identities = 51/229 (22%), Positives = 82/229 (35%), Gaps = 18/229 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM------- 131
A +FD DG ++DT D + N F++ + V+ G G
Sbjct: 6 AAIFDMDGTILDTSADLTS-ALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAY 62
Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQA 188
A ++ DE+ + + R E+F PG+ L+
Sbjct: 63 EAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNL 122
Query: 189 LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248
+KGVK+AV S +AV +V L P + R+KP P + + LG
Sbjct: 123 RQKGVKLAVVSNKPNEAVQVLVEELF-PGSFD--FALGEKSGIRRKPAPDMTSECVKVLG 179
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFD 295
V CV + DS I + A+ + M I + + A + D
Sbjct: 180 VPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD 228
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 3e-22
Identities = 37/251 (14%), Positives = 73/251 (29%), Gaps = 44/251 (17%)
Query: 48 SRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK 107
S +++ M + ++ LL D GVL++
Sbjct: 9 SGVDLGTENLYFQSMKSKGIK----------NLLIDLGGVLIN----------------- 41
Query: 108 ELGVTWDVD-LYGELLKIGGG--KERMTAYFNKTGWPE---KAPSDEEERKQFIASLHKR 161
D + KIG +E+ + + + + E R + K
Sbjct: 42 -----LDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM 96
Query: 162 KT-ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE 220
+ + L+ + L+ L + V + S +N+ + +
Sbjct: 97 VSDKQIDAAWNSFLVDIPTYKLDLL-LKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFK 155
Query: 221 KIQIFAGDV----VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
F + KP+P I+ G+DP ++DS I A+ G+
Sbjct: 156 VEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYT 215
Query: 277 TKSSYTAEEDF 287
K+ F
Sbjct: 216 PKAGEDWSHLF 226
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-20
Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 38/233 (16%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-TWDVDLYGELLKIGGG-KERMTAYFN 136
+LFD DG L D+ + + S + + + D+ + +G K Y+
Sbjct: 6 YVLFDLDGTLTDSAEGITK-SVKYSLNK--FDIQVEDLSSLNKF--VGPPLKTSFMEYY- 59
Query: 137 KTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKLIDQAL 189
DEE I + +++ G+ L+
Sbjct: 60 --------NFDEETATVAIDYYRDYFKAKGMFENKVY------------DGIEALLSSLK 99
Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV 249
+ G + V ++ I+ + I + + + A +L +
Sbjct: 100 DYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKEDVIRYAMESLNI 157
Query: 250 DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
+++ D + A + I + + E+ NA A + + E
Sbjct: 158 KSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANY-IVNSVDE 209
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 4e-20
Identities = 33/220 (15%), Positives = 65/220 (29%), Gaps = 34/220 (15%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD-LYGELLKIGGGK-ERMTAYFN 136
++FD GVL+ + + IG E M +
Sbjct: 7 NIVFDLGGVLIH----------------------LNREESIRRFKAIGVADIEEMLDPYL 44
Query: 137 KTGWPEK----APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEK 191
+ G S+EE R + + K T + + L + I +L
Sbjct: 45 QKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYI-DSLRP 103
Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV----VPRKKPDPAIYTLAASTL 247
++ + S +N + +S P F + + KP+ I+ +
Sbjct: 104 DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADS 163
Query: 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
G+ P + ++D +A A+ G +
Sbjct: 164 GMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIPAI 203
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 5e-20
Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
+ L+ A + GV + S A + L + ++ + +KP
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD--KVLLSGELGVEKP 75
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
+ A + AA + + CV+V+DS + + A AG+ + + A +
Sbjct: 76 EEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVVE 126
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 6e-20
Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 36/217 (16%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL +D GVL+ WD + ++ + G ++
Sbjct: 6 ALFWDIGGVLLTNG--------------------WDREQRADVAQRFGLDTDDFTERHRL 45
Query: 139 GWPEK---APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
PE + E +Q + + T E F ++E++ P RP V L L + +
Sbjct: 46 AAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAVMEEQSQP-RPEVLALARD-LGQRYR 103
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV----VPRKKPDPAIYTLAASTLGVD 250
+ + NE + + KP+PA+Y L + V
Sbjct: 104 MYSLN--NEGRDL----NEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVR 157
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
P V+V+D + AA+A GM + + E+
Sbjct: 158 PEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREEL 194
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 3e-19
Identities = 44/216 (20%), Positives = 77/216 (35%), Gaps = 26/216 (12%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
+FD V+VD I FN + +L +I + ++
Sbjct: 7 KMLYIFDLGNVIVD-------IDFNRVLGA-----------WSDLTRIPLASLK-KSFHM 47
Query: 137 KTGWPEK---APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEKG 192
+ + SDE + + + E F + + LRP V ++ + E+G
Sbjct: 48 GEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQG 107
Query: 193 VKVAVCS-TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251
+V V S T+ + + A+ I + D+ RK P+ IY G P
Sbjct: 108 HRVVVLSNTNRLHTTFWPEEYPEIRDAADHI-YLSQDLGMRK-PEARIYQHVLQAEGFSP 165
Query: 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
S V +D+ + A G+ I+ K T + F
Sbjct: 166 SDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYF 201
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 1e-17
Identities = 32/253 (12%), Positives = 77/253 (30%), Gaps = 51/253 (20%)
Query: 60 NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGVTWDVDL 117
N M +LFD DG L D ++ I S + G+ D++
Sbjct: 23 NAMKKN-----------YEIVLFDLDGTLTDPKEG---ITKSIQYSLNS--FGIKEDLEN 66
Query: 118 YGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVLI 170
+ IG + ++++ K+ + + +++
Sbjct: 67 LDQF--IGPPLHDTFKEY--------YKFEDKKAKEAVEKYREYFADKGIFENKIY---- 112
Query: 171 EKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
+ ++++ + G + V ++ I+ +R K I ++
Sbjct: 113 --------ENMKEILEMLYKNGKILLVATSKPTVFAETILR-YFDIDRYFKY-IAGSNLD 162
Query: 231 PRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLN 289
+ + V D ++V D + AK G+ I Y + E+
Sbjct: 163 GTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISE 222
Query: 290 ADAVFDCIGDPPE 302
++ + + +
Sbjct: 223 SEPTY-IVENVES 234
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 1e-17
Identities = 36/232 (15%), Positives = 73/232 (31%), Gaps = 41/232 (17%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGG-KERMTAYFNK 137
A+ FD DG LVD+ H +F TFKE + D +G +
Sbjct: 6 AIFFDLDGTLVDSSIGIHN-AFTYTFKELGVPSP-DAKTIRGF--MGPPLESSFATCL-- 59
Query: 138 TGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALE 190
+++ + + + + +LF P + L++ L
Sbjct: 60 ---------SKDQISEAVQIYRSYYKAKGIYEAQLF------------PQIIDLLE-ELS 97
Query: 191 KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250
+ + +T + + L + I+ K D L +
Sbjct: 98 SSYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVIHQALQT--HQLA 153
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
P +++ D+ + A+ G++ + + + D LN + P E
Sbjct: 154 PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDY-IAHKPLE 204
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 2e-17
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 8/101 (7%)
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
L PG + ++G+ A E T + + + + + A P
Sbjct: 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV--NDW-----MIAAPRPTAGWP 88
Query: 236 DPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCI 275
P +A L V CV++ L + AG+ I
Sbjct: 89 QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 5e-16
Identities = 32/236 (13%), Positives = 64/236 (27%), Gaps = 32/236 (13%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK---------IGGGKE 129
+ FD L+D + K L + + E+ ++
Sbjct: 6 LVTFDVWNTLLDLNIMLDEF-SHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRK 64
Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
+T K + +R A L+ ++ + G + +
Sbjct: 65 VLTGSQEALAGKLKVDVELVKRATARAILNVDESLVL------------EGTKEALQFVK 112
Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFAGDVVPRKKPDPAIYTLAA 244
E+G+K AV N + S+ + F D V KP ++
Sbjct: 113 ERGLKTAVIG--N--VMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVL 168
Query: 245 STLGVDPSSCVVVEDSTIG-LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
++ V P + + D+ A+ GM + I +
Sbjct: 169 NSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIAN 224
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 76.8 bits (188), Expect = 6e-16
Identities = 44/263 (16%), Positives = 77/263 (29%), Gaps = 58/263 (22%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM----- 131
L D V V + + + F EL V+ D L+ + + +
Sbjct: 130 EQLPLQFLDNVKVGKN---NIYAALEEFATTELHVS-DATLFSLKGALWTLAQEVYQEWY 185
Query: 132 --TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
+ + EK + + +I E L P+ V L++
Sbjct: 186 LGSKLYEDV---EKKIARTTFKTGYIYQ-------------EIILRPV-DEVKVLLNDLK 228
Query: 190 EKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVV----------PRKKPDPA 238
G ++ + + L L P A DV+ P KP+P
Sbjct: 229 GAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF 288
Query: 239 IYTLAA--------------STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284
Y A V+ +V DS L +A+ G I T + +
Sbjct: 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGK 348
Query: 285 EDF-----LNADAVFDCIGDPPE 302
+ +AD V + +G+
Sbjct: 349 DAAGELEAHHADYVINHLGELRG 371
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 75.6 bits (185), Expect = 6e-16
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG--DVVPR 232
V + + E G+KV + S+ + +A + + +++ G D
Sbjct: 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS---TEGDILELVDGHFDTKIG 185
Query: 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
K + Y A ++G ++ + + D T +AA+ A + V
Sbjct: 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 229
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 34/214 (15%), Positives = 61/214 (28%), Gaps = 46/214 (21%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+L D LV + K+ G D+
Sbjct: 5 AVLVDFGNTLVGFKPV-FYEKVYQVLKD--NGYDLDLRKV---------FRAYAKAMGMI 52
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTE-----LFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
+P++ + + K F+ L +E L I L + ++ G
Sbjct: 53 NYPDEDGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGY 112
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKI-----------QIFAGDVVPRKKPDPAIYTL 242
K+A+ S N R + + + + KP+P I+
Sbjct: 113 KLALVS--N------------ASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGF 158
Query: 243 AASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCI 275
A + +G V V D + AK + + I
Sbjct: 159 ALAKVGYP---AVHVGDIYELDYIGAKRSYVDPI 189
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 3e-15
Identities = 39/220 (17%), Positives = 72/220 (32%), Gaps = 36/220 (16%)
Query: 64 MRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK--ELGVTWDVDL--YG 119
M ++ + FD G L D ++ F + E+ W Y
Sbjct: 1 MDYIK----------GIAFDLYGTLFDV--HSVVGRCDEAFPGRGREISALWRQKQLEYT 48
Query: 120 ELLKIGGG---KERMTAY-FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
L + ++ T T D R + + L
Sbjct: 49 WLRSLMNRYVNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLR--------------L 94
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
V + + +G+K+A+ S + +++ A+VS + + + + D V KP
Sbjct: 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKP 152
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI 275
D +Y LA LG+D S+ + V + A+ G
Sbjct: 153 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 192
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 4e-15
Identities = 28/217 (12%), Positives = 57/217 (26%), Gaps = 36/217 (16%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVT-------------------WDVDLYG 119
L +D L+ + + L V + L
Sbjct: 3 LLTWDVKDTLLRLRHPLGEA-YATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSH 61
Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRP 179
L + + F+ G + + + H ++
Sbjct: 62 GLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVL------------D 109
Query: 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAI 239
G + + +G+++AV S + + + L + + KPDP I
Sbjct: 110 GAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDF---VLTSEAAGWPKPDPRI 166
Query: 240 YTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCI 275
+ A ++P V D+ +A GM
Sbjct: 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSF 203
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 8e-15
Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 42/214 (19%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKE---KELGVTWDVDLYGELLKIGGGKERMTAYF 135
+ FD D LVDT K I+ + + L V ++ Y EL+++
Sbjct: 4 VIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFE-TAYSELIEL----------- 50
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLPLRPGVAKLIDQALEKG 192
K + ++ + + ++ L PG K++ + E G
Sbjct: 51 IKEYGSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELG 110
Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----------IFAGDVVPRKKPDPAIYTL 242
++ + + N EKI + D KKP P I+
Sbjct: 111 YELGIITDGNPVKQW------------EKILRLELDDFFEHVIISDFEGVKKPHPKIFKK 158
Query: 243 AASTLGVDPSSCVVVEDSTIG-LAAAKAAGMKCI 275
A V P ++V D + AK GMK +
Sbjct: 159 ALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTV 192
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 1e-13
Identities = 40/225 (17%), Positives = 68/225 (30%), Gaps = 39/225 (17%)
Query: 62 MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYG 119
M + + + AL FDC G L+D E + + K G T+ D
Sbjct: 1 MQLTDFK----------ALTFDCYGTLIDWET-----GIVNALQPLAKRTGKTFTSDELL 45
Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK-----KL 174
E+ ++ A + R + + E E+ K
Sbjct: 46 EVFGRNESPQQ--------TETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKN 97
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
P P + + Q L+K K+ + S + + L I V K
Sbjct: 98 WPAFPDTVEAL-QYLKKHYKLVILSNIDRNEFKLSNAKLGVEFDH----IITAQDVGSYK 152
Query: 235 PDPAIYTLAASTL---GVDPSSCVVVEDSTIG-LAAAKAAGMKCI 275
P+P +T L G++ + +S A AG+
Sbjct: 153 PNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 2e-13
Identities = 36/266 (13%), Positives = 71/266 (26%), Gaps = 31/266 (11%)
Query: 40 LSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHR-I 98
L S + GS++ + N++ FD D L + H +
Sbjct: 30 LESLTHPGSKVTFPIDQDISATPQNPNLK----------VFFFDIDNCLYKSSTRIHDLM 79
Query: 99 SFN-DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
+ F + L ++ + + + +Y+ + G + +
Sbjct: 80 QQSILRFFQTHLKLSPE-----DAHVL------NNSYYKEYGLAIRGLVMFHKVNA---- 124
Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
L + + ++ L P P L+ + T+ K LLG
Sbjct: 125 LEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184
Query: 218 RAEKIQIFAGDVVPRK---KPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMK 273
+ KP + A G+ + ++DS + GMK
Sbjct: 185 DLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMK 244
Query: 274 CIVTKSSYTAEEDFLNADAVFDCIGD 299
+ E I D
Sbjct: 245 TCIHLVENEVNEILGQTPEGAIVISD 270
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 6e-13
Identities = 40/253 (15%), Positives = 84/253 (33%), Gaps = 46/253 (18%)
Query: 56 TSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTE-----------KDGHRISFNDTF 104
+ + + ++R A +FD G L+D +S +
Sbjct: 4 KDDDDKL-VDSLR----------ACVFDAYGTLLDVHSAVMRNADEVGASAEALS--MLW 50
Query: 105 KEKELGVTWDVDLYGELLKIGG-GKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKT 163
++++L +W L + E +T + + + + +++ +
Sbjct: 51 RQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLED----RKGLKDRLMSAYKE--- 103
Query: 164 ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ 223
L P A+ +++ G VA+ S N++ + A + +
Sbjct: 104 -----------LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD--S 150
Query: 224 IFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCI-VTKSSYT 282
+ D + KPDP IY A LGV+P+ V + L A G + + +
Sbjct: 151 CLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNP 210
Query: 283 AEEDFLNADAVFD 295
E +F +
Sbjct: 211 PEYEFAPLKHQVN 223
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 3e-12
Identities = 43/253 (16%), Positives = 81/253 (32%), Gaps = 60/253 (23%)
Query: 50 LNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKEL 109
+ + + M + VR A+ FD D L+DT R + K +
Sbjct: 1 MGSDKIHHHHHHMGLSRVR----------AVFFDLDNTLIDTAG-ASRRGMLEVIKLLQS 49
Query: 110 GVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI-------------A 156
+ + +++ +K + + + R
Sbjct: 50 KYHYKEEAEIIC-------DKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNR 102
Query: 157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216
L + L+ + ++ V ++ + L K V++ + +N G
Sbjct: 103 KLAEECYFLWKSTRLQHMILA-DDVKAMLTE-LRKEVRLLLL--TN------------GD 146
Query: 217 ERA--EKIQ----------IFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG- 263
+ EKI+ I G +KP P+I+ LGV P CV+V D+
Sbjct: 147 RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETD 206
Query: 264 LAAAKAAGMKCIV 276
+ AG+K V
Sbjct: 207 IQGGLNAGLKATV 219
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 7e-12
Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 28/205 (13%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEK--ELGVTW-DVDLYGELLKIGGGK----ERM 131
A++FD G L D + + + + + W L L+ G+ +
Sbjct: 4 AVVFDAYGTLFDVQ--SVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSV 61
Query: 132 TAY-FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALE 190
T T DE + ++ L P A+ + +
Sbjct: 62 TREALAYTLGTLGLEPDESFLADMAQAYNR--------------LTPYPDAAQCLAEL-- 105
Query: 191 KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250
+K A+ S + A+V+ + + + + D KP P Y L LGV
Sbjct: 106 APLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSYALVEEVLGVT 163
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCI 275
P+ + V + + AK G
Sbjct: 164 PAEVLFVSSNGFDVGGAKNFGFSVA 188
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-11
Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 21/230 (9%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKE-KELGVTWD--VDLYGELLKIGGGKERMTAYF 135
A+ FD G L E + + + + +D Y +L + Y
Sbjct: 4 AVFFDSLGTLNSVEG-AAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYR 62
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
E+ + +++ + E+ + + ++ P V +++ L+ V
Sbjct: 63 PLRDILEE--VMRKLAEKYGFKYPENFWEISLRMSQRYGELY-PEVVEVLKS-LKGKYHV 118
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFAGDVVPRKKPDPAIYTLAASTLGVD 250
+ + S+ + A + A I+ I + KP P I+ LA GV
Sbjct: 119 GMITDSDTEQAMAFL-------DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK 171
Query: 251 PSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
V V D+ +K GM I+ E + D + + +
Sbjct: 172 GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLRE 221
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-10
Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 67/231 (29%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW-DVDLYGELLK---------IGGGK 128
L FD D + + R +F + +++ + D Y L + G GK
Sbjct: 7 NLFFDLDDTIWAFSR-NARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGK 65
Query: 129 --------ERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPG 180
+R G DE ++F E F +I K + P
Sbjct: 66 VTKEELNRQRFFYPLQAVGV-----EDEALAERFS--------EDFFAIIPTKSGLM-PH 111
Query: 181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQ----------IFAGD 228
++++ L + + S N G K++ I +
Sbjct: 112 AKEVLEY-LAPQYNLYILS--N------------GFRELQSRKMRSAGVDRYFKKIILSE 156
Query: 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAA----AKAAGMKCI 275
+ KP P I+ A S + +++ DS A A GM
Sbjct: 157 DLGVLKPRPEIFHFALSATQSELRESLMIGDS---WEADITGAHGVGMHQA 204
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 57.5 bits (138), Expect = 6e-10
Identities = 36/238 (15%), Positives = 63/238 (26%), Gaps = 32/238 (13%)
Query: 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
LFDCD L+D + + +E + E L+ G
Sbjct: 11 DIVFLFDCDNTLLDNDHVLADL-RAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQ 69
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
+ + P D + + PG + +G
Sbjct: 70 RYR--LEQPRDTRLLLMSSFLIDYPFAS-----------RVYPGALNALRHLGARG-PTV 115
Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVV 256
+ S + + R+ G V+ + L V+
Sbjct: 116 ILSDGDVVFQPRKI------ARSGLWDEVEGRVLIYIHKELM---LDQVMECYPARHYVM 166
Query: 257 VEDSTIGLAAAKAA---GMKCIVTKSSYTAEE-----DFLNADAVFDCIGDPPEERFD 306
V+D LAA K A + + + + A + AD + IGD E +
Sbjct: 167 VDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMDAE 224
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-09
Identities = 30/223 (13%), Positives = 69/223 (30%), Gaps = 56/223 (25%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVT--------------WDVDLYGELLKI 124
LLFD D ++D + ++ F+++ + +T W G++ +
Sbjct: 9 TLLFDVDDTILDFQA-AEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRD 67
Query: 125 GGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKL 184
R +A + G+ D +Q + +L G L
Sbjct: 68 EVVNTRFSALLKEYGYEA----DGALLEQKYRRFLEEGHQLI------------DGAFDL 111
Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----------IFAGDVVPRKK 234
I L++ + + + N + T ++++ IF + +K
Sbjct: 112 ISN-LQQQFDLYIVT--NGVSHTQY----------KRLRDSGLFPFFKDIFVSEDTGFQK 158
Query: 235 PDPAIYTLAASTLG-VDPSSCVVVEDSTIG-LAAAKAAGMKCI 275
P + + +++ DS + + AG+
Sbjct: 159 PMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTC 201
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 54.8 bits (131), Expect = 6e-09
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 14/101 (13%)
Query: 187 QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR-----------KKP 235
+++ +V + S+ + KA + + + + D+ KK
Sbjct: 132 DFIKRKKRVFIYSSGSVKAQKLLFGY---VQDPNAPAHDSLDLNSYIDGYFDINTSGKKT 188
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV 276
+ Y +G S + + D+ + L AA G+ +
Sbjct: 189 ETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGL 229
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 9e-09
Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 38/200 (19%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDL---YGELLKIGGGKERMTAYF 135
L FD G ++DT + F+ K+L TW + + Y E +I R
Sbjct: 3 ILAFDIFGTVLDTS------TVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLRYIL-- 54
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
K +E + + + L L + + + +V
Sbjct: 55 -------KVRGEESKFDEELNKWKN--------------LKAYEDTKYL--KEISEIAEV 91
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
S + V + + IF+ + V KP P +Y ++G
Sbjct: 92 YALSNGSINEVKQHLERNGLLRYFK--GIFSAESVKEYKPSPKVYKYFLDSIGAKE--AF 147
Query: 256 VVEDSTIGLAAAKAAGMKCI 275
+V + + AK AGM+ I
Sbjct: 148 LVSSNAFDVIGAKNAGMRSI 167
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-08
Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 34/123 (27%)
Query: 173 KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ--------- 223
+ LR + +++ + G K A+ SN ++
Sbjct: 31 PEVVLRKNAKETLEKVKQLGFKQAI--LSN------------TATSDTEVIKRVLTNFGI 76
Query: 224 ------IFAGDVVPR----KKPDPAIYTLAASTLGVDPSSCVVVEDSTIG-LAAAKAAGM 272
I+A + + +KPD I+ + L +D + V+V ++ + A AG+
Sbjct: 77 IDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGI 136
Query: 273 KCI 275
I
Sbjct: 137 HAI 139
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 4e-08
Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 19/232 (8%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGK----ERMTAY 134
A +FD DGVL + E + L + + GG + M
Sbjct: 5 AAVFDLDGVLALP-------AVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGE 57
Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL---LPLRPGVAKLIDQALEK 191
+ W +E RK + + I K + + + +K
Sbjct: 58 ITLSQWIPLM--EENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKK 115
Query: 192 GVKVAVCSTS--NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV 249
G A+ + + +++A ++ L+ + + V KP+P IY TL
Sbjct: 116 GFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA 175
Query: 250 DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP 301
PS V ++D L A+ GM I+ + + TA ++ + P
Sbjct: 176 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTG-IQLLNTPA 226
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 1e-07
Identities = 17/112 (15%), Positives = 37/112 (33%), Gaps = 8/112 (7%)
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV-TAIVSFLLGPERAEKIQIFAGDVVPRK 233
+ L P V +++ + GV A S ++E ++ +I+ P
Sbjct: 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY-----PGS 121
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE 285
K + G+ S + +D + G+ CI ++ +
Sbjct: 122 KIT--HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQT 171
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 7e-06
Identities = 28/208 (13%), Positives = 56/208 (26%), Gaps = 29/208 (13%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKI--------GGGK 128
+ FD D L +E F+ D + LL + G G
Sbjct: 15 LVGFDGDDTLWKSEDYYRTA--EADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGA 72
Query: 129 ERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQA 188
+ MT +T ++ + I + + +E + GV + +
Sbjct: 73 KGMTLSMIETA---IELTEARIEARDIQRIVEIGRATLQHPVE-----VIAGVREAVAAI 124
Query: 189 LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248
V + + + + + + + DP Y S
Sbjct: 125 AADY-AVVLITKGDLFHQEQKI-------EQSGLSDLFPRIEVVSEKDPQTYARVLSEFD 176
Query: 249 VDPSSCVVVEDS-TIGLAAAKAAGMKCI 275
+ V++ +S + A G I
Sbjct: 177 LPAERFVMIGNSLRSDVEPVLAIGGWGI 204
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-05
Identities = 26/139 (18%), Positives = 42/139 (30%), Gaps = 24/139 (17%)
Query: 179 PGVAKLIDQALEKGVKVAVCSTSN----------EKAVTAIVSFLLGPERAEKIQIFA-- 226
PG + I + + V + + N + AI + + A
Sbjct: 30 PGSLQAIARLTQADWTVVLAT--NQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF 87
Query: 227 ------GDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS 280
D +KP P +Y A VD + V DS L AA AG + ++
Sbjct: 88 MCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG 147
Query: 281 YT----AEEDFLNADAVFD 295
A+ V +
Sbjct: 148 NGRKTLAQGGLPEGTRVCE 166
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 3e-05
Identities = 34/225 (15%), Positives = 70/225 (31%), Gaps = 57/225 (25%)
Query: 89 VDTEKDGHRISFNDTFKEKELGVTWDVDLYG--ELLKIGGGKERMTAYFNKTGWPEKAPS 146
+D E H+ + D E + D ++ K KE +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--------K 58
Query: 147 DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV 206
D LF L+ K+ V K +++ L K + E+
Sbjct: 59 DAVSGTLR----------LFWTLLSKQ----EEMVQKFVEEVLRINYKFLMSPIKTEQRQ 104
Query: 207 TAIVSFLLGPERAEKI----QIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI 262
++++ + +R +++ Q+FA V R +P L + L + P+ V+++
Sbjct: 105 PSMMTRMYIEQR-DRLYNDNQVFAKYNVSRLQP---YLKLRQALLELRPAKNVLID---- 156
Query: 263 GLAAAKAAGMK-CIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306
G+ K+ + D + + D
Sbjct: 157 --------GVLGS--GKTW-------VALDVCLS---YKVQCKMD 181
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 5e-05
Identities = 12/77 (15%), Positives = 22/77 (28%), Gaps = 9/77 (11%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVED--ST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP+ + A P V++ D + A+ GM I+ K+ D
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDV--DGAQNIGMLGILVKTGKYKAADEEKI 236
Query: 291 ----DAVFDCIGDPPEE 303
+ +
Sbjct: 237 NPPPYLTCESFPHAVDH 253
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 8e-05
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDS--T-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP P I A + + V+V D+ T I A AG++ I+ S ++ +D +
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDI--LAGFQAGLETILVLSGVSSLDDIDSM 233
Query: 291 ----DAVFDCIGD 299
++ + +
Sbjct: 234 PFRPSWIYPSVAE 246
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 9e-05
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVED--ST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP P + A +GV+ V++ D + A+ GM+ + ++ D +
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDV--GGAQRCGMRALQVRTGKFRPSDEHHP 247
Query: 291 ----DAVFDCIGD 299
D D + +
Sbjct: 248 EVKADGYVDNLAE 260
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 1e-04
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDS--T-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP I A + LGV+ ++V D+ T I + G+ ++ S +T +
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPTL 240
Query: 291 ----DAVFDCIGD 299
V D + +
Sbjct: 241 PTPPTYVVDSLDE 253
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 27/145 (18%)
Query: 177 LRPGVAKLIDQALEKGVKVAVCSTSN----------EKAVTAIVSFLLGPERAEKIQIFA 226
LRP + I A G+ V V +N A A+ +L R E + +
Sbjct: 57 LRPQMLPAIATANRAGIPVVV--VTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM 114
Query: 227 --------GDVVPRK-------KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271
V P KP+P + A L +D ++V D + A K AG
Sbjct: 115 VLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAG 174
Query: 272 MKCIVTKSSYTAEEDFLNADAVFDC 296
+ A + + D
Sbjct: 175 LAQGWLVDGEAAVQPGFAIRPLRDS 199
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVED--ST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP+ I A L + + V+V D T I A + ++ + +T E+ +
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDI--MAGINNDIDTLLVTTGFTTVEEVPDL 239
Query: 291 ----DAVFDCIGD 299
V + +
Sbjct: 240 PIQPSYVLASLDE 252
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVEDS--T-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP+ I A LG D S ++V D+ T I A AGM ++ + T E +
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTDD 240
Query: 291 ----DAVFDCIGD 299
D + +
Sbjct: 241 MEKPTHAIDSLTE 253
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 234 KPDPAIYTLAASTLGVDPSSCVVVED--ST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
KP+P + + + GV +V D T + K AG+ I+ + T ED A
Sbjct: 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDV--KLGKNAGIVSILVLTGETTPEDLERA 252
Query: 291 ----DAVFDCIGD 299
D VF +G+
Sbjct: 253 ETKPDFVFKNLGE 265
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 19/90 (21%)
Query: 221 KIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS--T-IGLAAAKAAGMKCIVT 277
+ + G KP I A LG+D VV D + AA KA G + ++
Sbjct: 180 EPDVVVG------KPSEVIMREALDILGLDAKDVAVVGDQIDVDV--AAGKAIGAETVLV 231
Query: 278 KSSYTAEEDFLNA--------DAVFDCIGD 299
+ T E+ D VF+ + D
Sbjct: 232 LTGVTTRENLDQMIERHGLKPDYVFNSLKD 261
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 29/146 (19%)
Query: 177 LRPGVAKLIDQALEKGVKVAVCSTSN----------EKAVTAIVSFLLGPERAEKIQIFA 226
GV + + + G + V +N E + ++ + +
Sbjct: 51 FIDGVIDAMRELKKMGFALVV--VTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG 108
Query: 227 --------GDVVPRK-------KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271
V KP P + A L +D ++ +V D + AA AA
Sbjct: 109 IYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAAN 168
Query: 272 MKC--IVTKSSYTAEEDFLNADAVFD 295
+ +V E AD V +
Sbjct: 169 VGTKVLVRTGKPITPEAENAADWVLN 194
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.98 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.98 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.97 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.97 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.96 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.96 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.96 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.96 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.96 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.96 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.96 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.96 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.96 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.96 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.95 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.95 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.95 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.95 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.95 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.95 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.95 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.94 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.94 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.94 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.94 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.94 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.94 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.93 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.93 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.93 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.93 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.93 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.92 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.92 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.91 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.91 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.9 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.9 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.9 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.89 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.89 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.89 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.88 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.88 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.88 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.87 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.87 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.86 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.86 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.85 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.84 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.84 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.84 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.84 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.84 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.83 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.83 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.83 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.83 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.83 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.82 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.81 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.81 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.81 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.81 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.8 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.8 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.79 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.79 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.79 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.78 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.77 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.77 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.76 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.75 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.6 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.74 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.74 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.73 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.72 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.7 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.69 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.68 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.67 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.67 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.66 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.65 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.63 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.6 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.58 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.57 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.57 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.56 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.54 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.45 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.44 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.43 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.41 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.41 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.32 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.29 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.25 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.24 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.13 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.08 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.05 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.96 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.92 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.87 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.87 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.76 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.64 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.62 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.54 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.38 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.36 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.28 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.25 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.19 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.13 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.08 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.98 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.84 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.68 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.48 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.36 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.13 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.05 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.96 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.96 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.84 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 96.22 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.33 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.2 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 95.16 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.02 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 91.96 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 91.09 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 90.68 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 89.88 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 88.43 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 86.13 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 85.14 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 84.04 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 83.97 | |
| 2dfa_A | 250 | Hypothetical UPF0271 protein TTHB195; lactam utili | 83.18 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 82.93 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 81.91 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 81.61 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 81.12 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=234.20 Aligned_cols=213 Identities=25% Similarity=0.317 Sum_probs=162.2
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHH-HhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (320)
+|+|+||+||||+|+... +..++.++++++|.+.. .+.+... .|......... +...... ...+.+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~-------~~~~~~~ 68 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKPYT--EDLHRRI--MGVPEREGLPILMEALEIK-------DSLENFK 68 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHHTTCC-------SCHHHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hccchhhhhhhhhhcccch-------hhHHHHH
Confidence 589999999999999874 78899999999988653 3444433 44444443333 3333221 1122222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+.+...+.+.+ ...++||+.++++.|++.|++++++||++...+...++.+++..+|+ .++++++++..||
T Consensus 69 ~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd--~~~~~~~~~~~KP 141 (216)
T 3kbb_A 69 KRVHEEKKRVFSE-----LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD--VMVFGDQVKNGKP 141 (216)
T ss_dssp HHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECGGGSSSCTT
T ss_pred HHHHHHHHHHHHH-----hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccc--ccccccccCCCcc
Confidence 2222222222211 16789999999999999999999999999999999999999999999 8999999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE-EcCCCCCccccc-CCCeeccCCCCChhhHHhhh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIV-TKSSYTAEEDFL-NADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~-v~~g~~~~~~~~-~a~~vi~~l~el~~~l~~~~ 308 (320)
+|++|+.+++++|++|++++||||+.+|+++|+++||++|| +.+|.+..+.+. ....++.+.+|+.+.|.+++
T Consensus 142 ~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~eLL 216 (216)
T 3kbb_A 142 DPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEVL 216 (216)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHHHC
T ss_pred cHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999986 888877766653 22334456778777776654
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=234.26 Aligned_cols=218 Identities=21% Similarity=0.323 Sum_probs=156.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
|++|+||||+||||+|+.. .+..+|.++++++|++.+.. ....+ .|.+... +..++...+.... .......
T Consensus 3 MkiKaViFDlDGTL~Ds~~-~~~~a~~~~~~~~g~~~~~~--~~~~~--~g~~~~~~~~~~~~~~~~~~~--~~~~~~~- 74 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAH-LHFQAWQQIAAEIGISIDAQ--FNESL--KGISRDESLRRILQHGGKEGD--FNSQERA- 74 (243)
T ss_dssp CCCCEEEECSBTTTBCCHH-HHHHHHHHHHHHTTCCCCTT--GGGGG--TTCCHHHHHHHHHHHTTCGGG--CCHHHHH-
T ss_pred ccCcEEEEcCCCcccCCHH-HHHHHHHHHHHHcCCCCCHH--HHHHH--cCCCHHHHHHHHHHHhhcccc--hhHHHHH-
Confidence 5689999999999999987 47889999999999875432 22222 3444443 3344444332111 1122222
Q ss_pred HHHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
.+.......+.+.+.. ....++||+.++++.|+++|++++++||... ...+++.+++..+|+ .++++++++.
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd--~i~~~~~~~~ 147 (243)
T 4g9b_A 75 ---QLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFT--FCADASQLKN 147 (243)
T ss_dssp ---HHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCS--EECCGGGCSS
T ss_pred ---HHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccc--cccccccccC
Confidence 2222223333333332 2245799999999999999999999998754 567889999999999 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
+||+|++|+.+++++|++|++||||||+.+|+++|+++||++|+|.+|....+.+ ..++++++++.++.+.+.+.
T Consensus 148 ~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ad~~~~~~~~l~~~~l~~~~~~l~~~ 224 (243)
T 4g9b_A 148 SKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNVAEN 224 (243)
T ss_dssp CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCSCSEEESSGGGCCHHHHHHHHHHHSCC
T ss_pred CCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCcHHHhcCChhhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987654333 23445555555544444333
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=231.18 Aligned_cols=216 Identities=21% Similarity=0.344 Sum_probs=158.6
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
..|+|+|+||+||||+|+.. .+..+|.++++++|++..... ...+ .|.......+.+....... ..........
T Consensus 23 ~~MIKaViFDlDGTLvDs~~-~~~~a~~~~~~~~g~~~~~~~--~~~~--~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 96 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAY-YHYMAWRKLAHKVGIDIDTKF--NESL--KGISRMESLDRILEFGNKK-YSFSEEEKVR 96 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHH-HHHHHHHHHHHTTTCCCCTTG--GGGT--TTCCHHHHHHHHHHHTTCT-TTSCHHHHHH
T ss_pred cchhheeeecCCCcccCCHH-HHHHHHHHHHHHcCCCCCHHH--HHHH--hCcchHHHHHHhhhhhcCC-CCCCHHHHHH
Confidence 36799999999999999887 478899999999988754322 2221 3333333333322221111 1122333332
Q ss_pred HHHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
+ .+...+.+...... ....++||+.++++.|+++|++++++|+... +...|+.+++..+|+ .++++++++.
T Consensus 97 ~----~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~gl~~~Fd--~i~~~~~~~~ 168 (250)
T 4gib_A 97 M----AEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHLGISDKFD--FIADAGKCKN 168 (250)
T ss_dssp H----HHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHHTCGGGCS--EECCGGGCCS
T ss_pred H----HHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhcccccccc--eeecccccCC
Confidence 2 22333334433332 1246899999999999999999999877643 567899999999999 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCCh-hhHHhh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP-EERFDL 307 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~-~~l~~~ 307 (320)
+||+|++|+.+++++|++|++|+||||+.+|+++|+++|+.+|+|.+. +.+..||++++++.||. +.|.+.
T Consensus 169 ~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----~~~~~ad~vi~~l~eL~~~~i~~~ 240 (250)
T 4gib_A 169 NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----ENLKKANLVVDSTNQLKFEYIQEK 240 (250)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----TTTTTSSEEESSGGGCCHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----hHhccCCEEECChHhCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999542 34567999999999994 555444
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=227.60 Aligned_cols=215 Identities=22% Similarity=0.258 Sum_probs=170.1
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
.++|+|+||+||||+|+... +..++.++++++|. ....+.+... .|.....+...+.... ........+
T Consensus 17 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~--~~~~~~~~~~--~g~~~~~~~~~~~~~~------~~~~~~~~~ 85 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTPAA-IATITAEVLAAMGT--AVSRGAILST--VGRPLPASLAGLLGVP------VEDPRVAEA 85 (237)
T ss_dssp CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTC--CCCHHHHHHH--TTSCHHHHHHHHHTSC------TTSHHHHHH
T ss_pred ccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCC--CCCHHHHHHh--cCccHHHHHHHHhCCC------CCHHHHHHH
Confidence 67899999999999998874 77789999999883 3344444333 5666655555443321 123344444
Q ss_pred HHHHHHHHHHHHHHHHH-hcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIE-KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
...+.+ .+.+.+. .....++||+.++|+.|+++|++++++||.....++..++.+++..+|+ .++++++++.+
T Consensus 86 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 159 (237)
T 4ex6_A 86 TEEYGR----RFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT--VIAGDDSVERG 159 (237)
T ss_dssp HHHHHH----HHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS--EEECTTTSSSC
T ss_pred HHHHHH----HHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee--eEEeCCCCCCC
Confidence 433333 2333332 0226789999999999999999999999999999999999998888898 89999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~ 306 (320)
||++++|+.+++++|++|+++++|||+.+|+.+|+.+|+.+|+|.+++...+.+ ..||++++++.||.+.|.+
T Consensus 160 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 160 KPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998765544 3799999999998887764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-32 Score=228.39 Aligned_cols=205 Identities=16% Similarity=0.229 Sum_probs=155.1
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... +..++.++++++|.... ..+.+... .|.+... .+... + ..+..+++
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~---~~~~~-~------~~~~~~~~ 67 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLES---SFATC-L------SKDQISEA 67 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHH---HHHTT-S------CGGGHHHH
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--cCccHHH---HHHHH-c------CHHHHHHH
Confidence 45899999999999998874 77789999999987642 22222222 3444332 22222 1 11122233
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.+.+.+ .+.... .....++||+.++|+.|++ |++++++||++...++..++.+++..+|+ .+++++ +..|
T Consensus 68 ~~~~~~----~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~--~~~K 137 (210)
T 2ah5_A 68 VQIYRS----YYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSS--PEAP 137 (210)
T ss_dssp HHHHHH----HHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEEC--SSCC
T ss_pred HHHHHH----HHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee--eeecCC--CCCC
Confidence 332222 221111 1125789999999999999 99999999999989999999999989998 777777 7899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEE 303 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~ 303 (320)
|+|++|+.+++++|++|++++||||+.+|+++|+++|+.+|++.+++...+.+ ..++++++++.|+.+.
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999988755444 3699999999887653
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=226.42 Aligned_cols=218 Identities=22% Similarity=0.283 Sum_probs=160.2
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhh------------cC--CC
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK------------TG--WP 141 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------~~--~~ 141 (320)
++|+|+||+||||+|+... +..++.++++.+|.......+.+... .|.+.....+.+.. .+ +.
T Consensus 3 ~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAYEAGSSRESLVAFGTKDE 79 (240)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCCCCHHHHHHH--CSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTC
T ss_pred cccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCCCCHHHHHHh--cCccHHHHHHHHHHhccccccccccccccccc
Confidence 5899999999999999874 77789999999987611233333332 45544333332210 00 00
Q ss_pred C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc
Q 020874 142 E-KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE 220 (320)
Q Consensus 142 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~ 220 (320)
. ......+...++.+.+ .+.|.... .....++||+.++|+.|+++|++++++||++...+...++.+++. +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~ 153 (240)
T 2hi0_A 80 QIPEAVTQTEVNRVLEVF----KPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD 153 (240)
T ss_dssp CCCTTCCHHHHHHHHHHH----HHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS
T ss_pred ccCCCCCHHHHHHHHHHH----HHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee
Confidence 0 0011233333333322 22222211 123578999999999999999999999999998899999999877 887
Q ss_pred ceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCC
Q 020874 221 KIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIG 298 (320)
Q Consensus 221 ~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~ 298 (320)
.++++++++.+||+|++|..+++++|++|++++||||+.+|+++|+++|+.+|++.+++.....+ ..++++++++.
T Consensus 154 --~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~ 231 (240)
T 2hi0_A 154 --FALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAE 231 (240)
T ss_dssp --EEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHH
T ss_pred --EEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHH
Confidence 78888888999999999999999999999999999999999999999999999999887654433 36999999988
Q ss_pred CChhhH
Q 020874 299 DPPEER 304 (320)
Q Consensus 299 el~~~l 304 (320)
|+...+
T Consensus 232 el~~~l 237 (240)
T 2hi0_A 232 KLEEAI 237 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=224.64 Aligned_cols=216 Identities=14% Similarity=0.196 Sum_probs=166.6
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
|.|+|+|+||+||||+|+... +..++.++++++|..... .+.+... .|.+.......+. ++ .......
T Consensus 1 M~m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~--~~------~~~~~~~ 68 (226)
T 3mc1_A 1 MSLYNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQVED-LSSLNKF--VGPPLKTSFMEYY--NF------DEETATV 68 (226)
T ss_dssp -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCCSC-GGGGGGG--SSSCHHHHHHHHH--CC------CHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCCCC-HHHHHHH--hCcCHHHHHHHHh--CC------CHHHHHH
Confidence 356899999999999999874 677889999998877432 2222222 4554443332221 21 2333333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
....+.+ .+.+.. .....++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++++++++.+
T Consensus 69 ~~~~~~~----~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 141 (226)
T 3mc1_A 69 AIDYYRD----YFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKL 141 (226)
T ss_dssp HHHHHHH----HHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSSS
T ss_pred HHHHHHH----HHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee--eeeccCCCCCC
Confidence 3332222 221111 1226789999999999999999999999999999999999998888898 88889999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~~ 308 (320)
||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.+|++.+|+...+.+ ..||++++++.|+.+.+.+..
T Consensus 142 kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~~ 218 (226)
T 3mc1_A 142 STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILELR 218 (226)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998877665 689999999999988766543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=221.77 Aligned_cols=213 Identities=25% Similarity=0.339 Sum_probs=165.1
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
+++|+|+||+||||+|+... +..++.++++++|.... .+.+... .|...... ..++...+.. ...+..
T Consensus 28 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~-- 96 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKKYS--WDVKSLV--MGKKALEAAQIIIDVLQLP----MSKEEL-- 96 (250)
T ss_dssp CCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--TTCCHHHHHHHHHHHHTCS----SCHHHH--
T ss_pred cCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHh--cCCCHHHHHHHHHHHhCCC----CCHHHH--
Confidence 56899999999999998874 77789999999887643 3333332 45554443 3334444432 122222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH-hcCcccccceeEEeCC--CC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGD--VV 230 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~-~~~~~~~~~~~i~~~d--~~ 230 (320)
...+ .+.+.+.+.. ..++||+.++|+.|+++|++++++||+....+...+.. +++..+|+ .+++++ ++
T Consensus 97 -~~~~----~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~--~~~~~~~~~~ 167 (250)
T 3l5k_A 97 -VEES----QTKLKEVFPT--AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS--HIVLGDDPEV 167 (250)
T ss_dssp -HHHH----HHHHHHHGGG--CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS--CEECTTCTTC
T ss_pred -HHHH----HHHHHHHhcc--CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee--eEEecchhhc
Confidence 2222 2222222222 78899999999999999999999999998777777654 46667888 788888 88
Q ss_pred CCCCCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDP--SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~--~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+..||+|++|+.+++++|+++ +++++|||+.+|+++|+++|+.+|++.+++...+....||++++++.|+...++++
T Consensus 168 ~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l 246 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGL 246 (250)
T ss_dssp CSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTC
T ss_pred cCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcC
Confidence 999999999999999999998 99999999999999999999999999999887777788999999999999887765
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=222.73 Aligned_cols=216 Identities=20% Similarity=0.259 Sum_probs=166.7
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhh-cCCCCCCCCCHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNK-TGWPEKAPSDEEER 151 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 151 (320)
|+++|+|+||+||||+|+... +..++.++++++|+.... +.... ..|..... +..++.. .+.. ...+..
T Consensus 21 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~--~~g~~~~~~~~~~~~~~~~~~----~~~~~~ 91 (243)
T 3qxg_A 21 RKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDLSR--EEAYM--HEGRTGASTINIVFQRELGKE----ATQEEI 91 (243)
T ss_dssp -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCH--HHHHH--TTTSCHHHHHHHHHHHHHSSC----CCHHHH
T ss_pred cccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCCCCH--HHHHH--HhCCCHHHHHHHHHHHHhCCC----CCHHHH
Confidence 467899999999999998874 777899999998876432 22221 13443322 3333332 2221 234444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc--cceeEEeCCC
Q 020874 152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV 229 (320)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~--~~~~i~~~d~ 229 (320)
.+....+. +.+.. .....++||+.++|+.|+++|++++++||.....+...++. ++..+| + .++++++
T Consensus 92 ~~~~~~~~----~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d--~i~~~~~ 161 (243)
T 3qxg_A 92 ESIYHEKS----ILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKE--LMVTAFD 161 (243)
T ss_dssp HHHHHHHH----HHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGG--GEECTTT
T ss_pred HHHHHHHH----HHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcc--eEEeHHh
Confidence 44333322 11111 12367899999999999999999999999998888888888 888889 6 7899999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
++.+||+|++|+.+++++|++|+++++|||+.+|+.+|+++|+.+|++.++......+ ..||++++++.||.+.|.++
T Consensus 162 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 162 VKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp CSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999987766554 47999999999999988776
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 242 i 242 (243)
T 3qxg_A 242 M 242 (243)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=221.11 Aligned_cols=218 Identities=18% Similarity=0.222 Sum_probs=167.9
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERK 152 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 152 (320)
|.++|+|+||+||||+|+.. .+..++.++++++|+... .+.+... .|.....+.. ++...+. ....+...
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~ 73 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVY-QNVAAWKEALDAENIPLA--MWRIHRK--IGMSGGLMLKSLSRETGM----SITDEQAE 73 (233)
T ss_dssp --CCCEEEECCBTTTEECHH-HHHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHC--------CCHHHHH
T ss_pred CCcCcEEEEcCCCccccChH-HHHHHHHHHHHHcCCCCC--HHHHHHH--cCCcHHHHHHHHHHhcCC----CCCHHHHH
Confidence 35689999999999999877 477789999999887753 3333333 5555444433 3333322 12344444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
.+...+ .+.+..... ...++||+.++|+.|++.|++++++||.....+...++.+++..+|+ .++++++++.
T Consensus 74 ~~~~~~----~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~ 145 (233)
T 3s6j_A 74 RLSEKH----AQAYERLQH--QIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSY 145 (233)
T ss_dssp HHHHHH----HHHHHHTGG--GCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS--CEECGGGSSC
T ss_pred HHHHHH----HHHHHHhhc--cCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh--eeeccccCCC
Confidence 433332 223322222 26789999999999999999999999999999999999998888888 8899999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhhh
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~~ 308 (320)
+||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.+|+|.++....+.+ .+||++++++.|+.+.|.+..
T Consensus 146 ~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 223 (233)
T 3s6j_A 146 GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIA 223 (233)
T ss_dssp CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTC
T ss_pred CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999986666554 359999999999888776544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=216.93 Aligned_cols=211 Identities=20% Similarity=0.233 Sum_probs=158.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHH-hhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 153 (320)
+|+|+|+||+||||+|+... +..++.++++++|..... +.+... .|.....+...+ ...+.. ... .+
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~---~~ 70 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGISIDH--LPPSFF--IGGNTKQVWENILRDEYDK----WDV---ST 70 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCTT--SCHHHH--TTSCGGGCHHHHHGGGGGG----SCH---HH
T ss_pred ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--cCCCHHHHHHHHHHhhcCC----CCH---HH
Confidence 56899999999999998874 777899999998875433 223322 444444433333 222110 111 11
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
+...+. +.+..........++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++++++++..
T Consensus 71 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 144 (214)
T 3e58_A 71 LQEEYN----TYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD--IVLSGEEFKES 144 (214)
T ss_dssp HHHHHH----HHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGCSSC
T ss_pred HHHHHH----HHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee--eEeecccccCC
Confidence 112211 111111100113578999999999999999999999999999999999999888998 88999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.++++.++...... ..++++++++.|+.+.|
T Consensus 145 kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 145 KPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGGGGGGC
T ss_pred CCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999876544433 78999999999987753
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=218.84 Aligned_cols=219 Identities=21% Similarity=0.249 Sum_probs=164.1
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHH-----------HhhcCCCC
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-----------FNKTGWPE 142 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 142 (320)
|+++|+|+||+||||+|+.......++.++++++|+... .+.+... .+......... ....+.
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVT--QAEAREP--MGTEKSEHIRRMLGNSRIANAWLSIKGQ-- 84 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHTTSHHHHHHHHHHHSS--
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCC--HHHHHHH--hcCchHHHHHHhccchHHHHHHHHHhcc--
Confidence 356899999999999998774326788999999887642 3333222 33322221111 111121
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccc-ccc
Q 020874 143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER-AEK 221 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~-~~~ 221 (320)
........++...+.... .+.+.. ...++||+.++|+.|++.|++++++||.....+...++.++...+ |+
T Consensus 85 --~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~- 156 (277)
T 3iru_A 85 --ASNEEDIKRLYDLFAPIQ----TRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA- 156 (277)
T ss_dssp --CCCHHHHHHHHHHHHHHH----HHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred --CCCHHHHHHHHHHHHHHH----HHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-
Confidence 123444444444433332 222222 268899999999999999999999999999999999999877777 66
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC-----------------
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA----------------- 283 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~----------------- 283 (320)
.++++++++.+||++.+|+.+++++|++| +++++|||+.+|+.+|+++|+.+|+|.+|++.
T Consensus 157 -~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 3iru_A 157 -STVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQ 235 (277)
T ss_dssp -EEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHH
T ss_pred -eEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhh
Confidence 78899999999999999999999999999 99999999999999999999999999999752
Q ss_pred ------cccc--cCCCeeccCCCCChhhHHhh
Q 020874 284 ------EEDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 284 ------~~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
.+.+ .+||++++++.||.+.|.++
T Consensus 236 ~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 267 (277)
T 3iru_A 236 SYRQHAEQRLFNAGAHYVIDSVADLETVITDV 267 (277)
T ss_dssp HHHHHHHHHHHHHTCSEEESSGGGTHHHHHHH
T ss_pred hhhhhhHHHHhhCCCCEEecCHHHHHHHHHHH
Confidence 2222 46999999999999987654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=213.92 Aligned_cols=218 Identities=12% Similarity=0.110 Sum_probs=161.8
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
|+++|+|+||+||||+|+... +..++.++++++|..... .........+. .....+..... ...+...+
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~ 72 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIPLTN--DMKAQYKTINQ---GLWRAFEEGKM-----TRDEVVNT 72 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCH--HHHHHHHHHHH---HHHHHHHTTSS-----CHHHHHHH
T ss_pred cccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCCcch--HHHHHHHHHHH---HHHHHHHhccC-----CHHHHHHH
Confidence 456899999999999998874 777899999998877542 22222111111 11111111100 01111111
Q ss_pred HHHHHH---------HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeE
Q 020874 154 FIASLH---------KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI 224 (320)
Q Consensus 154 ~~~~~~---------~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i 224 (320)
.+..+. ....+.+.+.+.. ...++||+.++|+.|++. ++++++||+....+...++.+++..+|+ .+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~ 148 (238)
T 3ed5_A 73 RFSALLKEYGYEADGALLEQKYRRFLEE-GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK--DI 148 (238)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHTT-CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS--EE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHHh-cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh--eE
Confidence 111111 1222333333332 267899999999999999 9999999999999999999998888898 88
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 225 FAGDVVPRKKPDPAIYTLAASTLG-VDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 225 ~~~d~~~~~KP~~~~~~~~~~~~g-~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+++++++.+||+|++|+.+++++| ++|+++++|||+. +|+.+|+++|+.+|++.+++........||++++++.|+.+
T Consensus 149 ~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~ 228 (238)
T 3ed5_A 149 FVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYH 228 (238)
T ss_dssp EEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHH
T ss_pred EEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHH
Confidence 999999999999999999999999 9999999999998 99999999999999999887666666789999999999988
Q ss_pred hHHh
Q 020874 303 ERFD 306 (320)
Q Consensus 303 ~l~~ 306 (320)
.+.+
T Consensus 229 ~l~~ 232 (238)
T 3ed5_A 229 ILNI 232 (238)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 7654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=220.54 Aligned_cols=210 Identities=12% Similarity=0.139 Sum_probs=165.4
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
|+|+|+||+||||+|+... +..++.++++++|... ..+.+... .|......... ..+ .......+..
T Consensus 28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~--~~~------~~~~~~~~~~ 94 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIKE--DLENLDQF--IGPPLHDTFKE--YYK------FEDKKAKEAV 94 (240)
T ss_dssp CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CGGGGGGG--SSSCHHHHHHH--TSC------CCHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--hCccHHHHHHH--HhC------CCHHHHHHHH
Confidence 5799999999999998874 7778999999988772 33333322 34443332221 112 2344444443
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+.+. +.+.. .....++||+.++|+.|++.|++++++||+....++..++.+++..+|+ .++++++++.+||
T Consensus 95 ~~~~~~----~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp 167 (240)
T 3sd7_A 95 EKYREY----FADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDGTRVN 167 (240)
T ss_dssp HHHHHH----HHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSCCCC
T ss_pred HHHHHH----HHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE--EEEeccccCCCCC
Confidence 333322 22211 1236789999999999999999999999999999999999998888898 8888999999999
Q ss_pred CHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHH
Q 020874 236 DPAIYTLAASTLGVD-PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~-~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~ 305 (320)
++++|+.+++++|++ ++++++|||+.+|+++|+++|+.+|++.+|+...+.+ ..++++++++.|+.+.|+
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ll 240 (240)
T 3sd7_A 168 KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL 240 (240)
T ss_dssp HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHHC
T ss_pred CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHhC
Confidence 999999999999999 9999999999999999999999999999998877766 689999999999988763
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=219.04 Aligned_cols=210 Identities=24% Similarity=0.290 Sum_probs=159.7
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++|+|+||+||||+|+... +..++.++++++|.... ..+.+... .|.+...+...+... .... ++.
T Consensus 2 ~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~------~~~~----~~~ 67 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEEY-YPDNVTKY--IGGGVRALLEKVLKD------KFRE----EYV 67 (222)
T ss_dssp EECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGGG-CCSCGGGG--CSSCHHHHHHHHHGG------GCCT----HHH
T ss_pred CCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCcCHHHHHHHHhCh------HHHH----HHH
Confidence 5789999999999998874 67788999999887521 11122221 344444433332110 0011 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+ .+.+.... .....++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++++++++.+||
T Consensus 68 ~~~----~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp 140 (222)
T 2nyv_A 68 EVF----RKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKKP 140 (222)
T ss_dssp HHH----HHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTSSCTTCC
T ss_pred HHH----HHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe--EEEecCcCCCCCC
Confidence 111 12221111 1236789999999999999999999999999999999999998888888 8889999999999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+|++|+.+++++|++|++++||||+.+|+.+|+++|+.+|++.+++..... ..++++++++.|+.+.+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~~ 211 (222)
T 2nyv_A 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDNH 211 (222)
T ss_dssp TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHTT
T ss_pred ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988765544 77999999999998866543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=216.99 Aligned_cols=215 Identities=19% Similarity=0.134 Sum_probs=156.9
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCC-CCCchhHHHHHHHhcC------cHHHHHHHHhhc-CCCCCCCCC
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGG------GKERMTAYFNKT-GWPEKAPSD 147 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~g~------~~~~~~~~~~~~-~~~~~~~~~ 147 (320)
|+|+|+||+||||+|+... +..++.+++++++.. ...........+..+. ....+..++... +.. .
T Consensus 1 m~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~ 74 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY-----N 74 (241)
T ss_dssp CCCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC-----C
T ss_pred CccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc-----c
Confidence 4689999999999998874 666788887776321 1222222221111111 011233333332 221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC
Q 020874 148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG 227 (320)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 227 (320)
......+.. .+.+.+... ..++||+.++|+.|+++|++++++||+....+...++.+++..+|+ .++++
T Consensus 75 ~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~ 143 (241)
T 2hoq_A 75 PKWISAGVI--------AYHNTKFAY-LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE--HVIIS 143 (241)
T ss_dssp HHHHHHHHH--------HHHHHHHHH-CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS--EEEEG
T ss_pred chHHHHHHH--------HHHHHHHhh-CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc--EEEEe
Confidence 222222222 122222111 6789999999999999999999999999999999999998888888 88899
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc---CCCeeccCCCCChhh
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL---NADAVFDCIGDPPEE 303 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~---~a~~vi~~l~el~~~ 303 (320)
++++..||+|++|+.+++++|++|+++++|||+. +|+.+|+++|+.++++.+|+.....+. .++++++++.|+.+.
T Consensus 144 ~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (241)
T 2hoq_A 144 DFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEV 223 (241)
T ss_dssp GGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999999998 999999999999999988876655543 799999999999887
Q ss_pred HHhh
Q 020874 304 RFDL 307 (320)
Q Consensus 304 l~~~ 307 (320)
+.+.
T Consensus 224 l~~~ 227 (241)
T 2hoq_A 224 LARE 227 (241)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-29 Score=216.20 Aligned_cols=219 Identities=22% Similarity=0.274 Sum_probs=161.5
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHH-HHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT-AYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (320)
.++|+|+||+||||+|+... +..++.++++++|.... ..+.+... .|.+...+. ..+.............+...+
T Consensus 21 ~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (243)
T 2hsz_A 21 TQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEKELTEDEFKY 96 (243)
T ss_dssp SSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred ccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCchHHHHHHHHhhhhhccccccCCHHHHHH
Confidence 66789999999999999874 67788999999887633 23333332 344433322 222211000000122333333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
..+.+ .+.|..... ....++||+.++|+.|+++|++++++||.+...+..+++.+++..+|+ .++++++++..
T Consensus 97 ~~~~~----~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~ 169 (243)
T 2hsz_A 97 FKRQF----GFYYGENLC-NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPEI 169 (243)
T ss_dssp HHHHH----HHHHHHHTT-SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSSSC
T ss_pred HHHHH----HHHHHHhcc-ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE--EEEecccCCCC
Confidence 33222 222222221 236789999999999999999999999999999999999998888888 78889988999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc--cccCCCeeccCCCCChhhH
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE--DFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~--~~~~a~~vi~~l~el~~~l 304 (320)
||++++|+.+++++|+++++++||||+.+|+.+|+++|+.++++.+++.... ....+|++++++.|+.+.+
T Consensus 170 Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 170 KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred CcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998865322 2457999999999987643
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=218.42 Aligned_cols=216 Identities=22% Similarity=0.287 Sum_probs=164.0
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhh-cCCCCCCCCCHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNK-TGWPEKAPSDEEER 151 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 151 (320)
++++|+|+||+||||+|+... +..++.++++++|..... +.... ..|..... +..++.. .+.. ...+..
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~--~~g~~~~~~~~~~~~~~~~~~----~~~~~~ 90 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFGLSR--EEAYM--HEGRTGASTINIVSRRERGHD----ATEEEI 90 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCCH--HHHHH--TTTSCHHHHHHHHHHHHHSSC----CCHHHH
T ss_pred CCCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCCCCH--HHHHH--HhCCChHHHHHHHHHHhcCCC----CCHHHH
Confidence 467899999999999998874 777899999998876432 22211 13444332 3333332 2221 234444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc--cceeEEeCCC
Q 020874 152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV 229 (320)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~--~~~~i~~~d~ 229 (320)
.+....+. +.+.. .....++||+.++|+.|+++|++++++||+....+...++. ++..+| + .++++++
T Consensus 91 ~~~~~~~~----~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~--~~~~~~~ 160 (247)
T 3dv9_A 91 KAIYQAKT----EEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQAN--LMVTAFD 160 (247)
T ss_dssp HHHHHHHH----HHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGG--GEECGGG
T ss_pred HHHHHHHH----HHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCC--eEEeccc
Confidence 33333221 11111 12367899999999999999999999999998888888988 888888 6 7899999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
++.+||+|++|+.+++++|++|+++++|||+.+|+.+|+++|+.+|++.+++.....+ ..||++++++.|+.+.+.++
T Consensus 161 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 240 (247)
T 3dv9_A 161 VKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETL 240 (247)
T ss_dssp CSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988776654 47999999999999888776
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 241 ~ 241 (247)
T 3dv9_A 241 Q 241 (247)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=212.32 Aligned_cols=207 Identities=17% Similarity=0.212 Sum_probs=158.7
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... +..++.++++++|... ..+.+... .|.+...+.+.+ ++. .....+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~---~~~------~~~~~~~ 67 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKPF--SPAQAQKT--FPMAAEQAMTEL---GIA------ASEFDHF 67 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCCC--CHHHHHHH--TTSCHHHHHHHT---TCC------GGGHHHH
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCCC--CHHHHHHH--cCCcHHHHHHHc---CCC------HHHHHHH
Confidence 35799999999999998874 6778888999887743 33444333 455544444432 321 1112222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
...+ .+.+... .....++||+.++|+.|+++ ++++++||++...++..++.+++..+|+ .++++++.+..|
T Consensus 68 ~~~~----~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~K 138 (209)
T 2hdo_A 68 QAQY----EDVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK 138 (209)
T ss_dssp HHHH----HHHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred HHHH----HHHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCcCCCCC
Confidence 2211 1111110 12367899999999999999 9999999999999999999988878887 788888889999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
|++++|+.+++++|++++++++|||+.+|+.+|+++|+.++++++++...+.+..++++++++.|+.+.+
T Consensus 139 P~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 139 PDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred CCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988875555545999999999987643
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=217.94 Aligned_cols=214 Identities=24% Similarity=0.278 Sum_probs=165.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHH-hhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 153 (320)
+++|+|+||+||||+|+... +..++.++++++|...... +.+.. ..|.....+...+ ...+... .......
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~-~~~~~--~~g~~~~~~~~~~~~~~~~~~----~~~~~~~ 97 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLHLDLT-EIAMY--FTGQRFDGVLAYLAQQHDFVP----PPDFLDV 97 (259)
T ss_dssp CCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCCCCHH-HHHHH--TTTCCHHHHHHHHHHHHCCCC----CTTHHHH
T ss_pred cCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCCCCHH-HHHHH--HhCCCHHHHHHHHHHHcCCCC----CHHHHHH
Confidence 56899999999999998874 7778899999988764321 11221 1455554444433 3334321 1222222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccccee-EEeCCCCC-
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-IFAGDVVP- 231 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~-i~~~d~~~- 231 (320)
+...+ .+.+ ....++||+.++|+.|++.|++++++||.....++..++.+++..+|+ . ++++++++
T Consensus 98 ~~~~~----~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~i~~~~~~~~ 165 (259)
T 4eek_A 98 LETRF----NAAM------TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAG--EHIYDPSWVGG 165 (259)
T ss_dssp HHHHH----HHHH------TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHC--SCEECGGGGTT
T ss_pred HHHHH----HHHh------ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhcc--ceEEeHhhcCc
Confidence 22222 2211 237889999999999999999999999999999999999998888888 6 88889999
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC----cccc--cCCCeeccCCCCChhhHH
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA----EEDF--LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~----~~~~--~~a~~vi~~l~el~~~l~ 305 (320)
.+||++++|+.+++++|++|+++++|||+.+|+++|+++|+.+|++.+|... .+.+ ..||++++++.|+.+.|.
T Consensus 166 ~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988654 2233 469999999999999887
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
+.-
T Consensus 246 ~~~ 248 (259)
T 4eek_A 246 EAG 248 (259)
T ss_dssp HTT
T ss_pred hcc
Confidence 654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=212.60 Aligned_cols=219 Identities=16% Similarity=0.138 Sum_probs=162.8
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHH-cCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE-KELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
++|+|+||+||||+|+... +..++.+++++ +|.... . .+ ....|..... +..++...+.. .....+
T Consensus 3 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~-~--~~--~~~~g~~~~~~~~~~~~~~~~~------~~~~~~ 70 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGS-T--GS--HDFSGKMDGAIIYEVLSNVGLE------RAEIAD 70 (234)
T ss_dssp CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCC-C-------CCTTCCHHHHHHHHHHTTTCC------HHHHHH
T ss_pred cceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCc-c--ch--hhhcCCChHHHHHHHHHHcCCC------cccchh
Confidence 5899999999999999874 66788888888 676643 1 11 1225666555 45555554331 110011
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC-
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP- 231 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~- 231 (320)
....+.....+.+.+.+......++||+.++|+.|+++ |++++++||+....+...++.+++..+|+ .++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~ 148 (234)
T 2hcf_A 71 KFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDALD 148 (234)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCSS
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC--cceecCCCcC
Confidence 12222222223332222112256789999999999999 99999999999999999999998888887 566666654
Q ss_pred CCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccccc--CCCeeccCCCCChhhHHhh
Q 020874 232 RKKPDPAIYTLAASTLG--VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL--NADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g--~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~--~a~~vi~~l~el~~~l~~~ 307 (320)
.+||++.+|+.+++++| ++|+++++|||+.+|+++|+++|+.+|++.+++...+.+. .++++++++.|+.+.+.++
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~ 228 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 228 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHH
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHH
Confidence 46788999999999999 9999999999999999999999999999999887665553 4999999999999987766
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
.
T Consensus 229 ~ 229 (234)
T 2hcf_A 229 L 229 (234)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=212.74 Aligned_cols=208 Identities=26% Similarity=0.395 Sum_probs=145.9
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
+|+|+||+||||+|+... +..++.++++++|.... .+.+... .|........ ++...+... ....+....+.
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 74 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIPFD--RDMNERL--KGISREESLESILIFGGAET--KYTNAEKQELM 74 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHT--TTCCHHHHHHHHHHHTTCTT--TSCHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--cCCCHHHHHHHHHHHhCCCC--CCCHHHHHHHH
Confidence 689999999999998874 77789999999888743 3333332 4555544433 334333210 12344444444
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
..+. +.+.+.+... ...++||+.++|+.|+++|++++++||+.. +...++.+++..+|+ .++++++++.+|
T Consensus 75 ~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~--~i~~~~~~~~~K 146 (233)
T 3nas_A 75 HRKN----RDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH--AIVDPTTLAKGK 146 (233)
T ss_dssp HHHH----HHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS--EECCC-------
T ss_pred HHHH----HHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC--EEeeHhhCCCCC
Confidence 3333 3333333321 123799999999999999999999999855 788899998888998 888999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEE 303 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~ 303 (320)
|+|++|+.+++++|++|++++||||+.+|+.+|+++|+.++++++. +.+..||++++++.|+...
T Consensus 147 p~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~----~~~~~ad~v~~s~~el~~~ 211 (233)
T 3nas_A 147 PDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG----QPMLGADLVVRQTSDLTLE 211 (233)
T ss_dssp --CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCHH
T ss_pred CChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc----cccccCCEEeCChHhCCHH
Confidence 9999999999999999999999999999999999999999998643 2334899999999999743
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=212.81 Aligned_cols=206 Identities=17% Similarity=0.124 Sum_probs=153.2
Q ss_pred CCCceEEEEeCCCccccCCccchHHHH-HHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISF-NDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK 152 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (320)
|+++|+|+||+||||+|+... +..++ .++++++|.....- .. ..+.........+... ...
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~-~~-----~~g~~~~~~~~~~~~~-----------~~~ 83 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDL-DS-----IPNSTIPKYLITLLGK-----------RWK 83 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCC-TT-----SCTTTHHHHHHHHHGG-----------GHH
T ss_pred cCCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHH-HH-----HhCccHHHHHHHHhCc-----------hHH
Confidence 567899999999999999875 55567 89999988764211 10 0233322222221111 011
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
.......+.+..........++||+.++|+.|+++|++++++||.....+...++.+++..+|+ .++++++++.
T Consensus 84 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~ 157 (231)
T 3kzx_A 84 ----EATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGT 157 (231)
T ss_dssp ----HHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEETSSSC
T ss_pred ----HHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee--eEEcccccCC
Confidence 1111111111100011236789999999999999999999999999999999999999888898 8889999999
Q ss_pred CCCCHHHHHHHHHHcCCCCC-cEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 233 KKPDPAIYTLAASTLGVDPS-SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~-~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
+||++++|+.+++++|++|+ ++++|||+.+|+++|+++|+.+|++.++.. ..++++++++.|+.+.|.+++
T Consensus 158 ~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 158 IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHHHHHh
Confidence 99999999999999999998 999999999999999999999999955433 468899999999999887765
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=211.56 Aligned_cols=131 Identities=16% Similarity=0.254 Sum_probs=116.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++ +++++|+||++...+...++.+++..+|+ .++++++++.+||+|++|+.+++++|++|+++
T Consensus 120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 120 MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh--eEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 7899999999999998 59999999999999999999999999998 88899989999999999999999999999999
Q ss_pred EEEecC-HhhHHHHHHcCC-eEEEEcCCCCCcc-cccCCCeeccCCCCChhhHHhhh
Q 020874 255 VVVEDS-TIGLAAAKAAGM-KCIVTKSSYTAEE-DFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 255 v~VGDs-~~Di~~A~~aG~-~~v~v~~g~~~~~-~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
+||||+ .+|+++|+++|+ .+|++.++..... ....++++++++.|+.+.+.++.
T Consensus 197 ~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 253 (260)
T 2gfh_A 197 VMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID 253 (260)
T ss_dssp EEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred EEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHHHHh
Confidence 999996 899999999999 8999977644322 23579999999999988776654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-29 Score=210.84 Aligned_cols=212 Identities=14% Similarity=0.070 Sum_probs=154.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHh-----------cCcHH---HH-HHHHhhcC
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKI-----------GGGKE---RM-TAYFNKTG 139 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----------g~~~~---~~-~~~~~~~~ 139 (320)
.|+|+|+||+||||+|+... +..++.++++++|.... ......+... |.+.. .+ ..+....+
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 78 (235)
T 2om6_A 2 REVKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHIK--DVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLK 78 (235)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCCc--HHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhC
Confidence 35799999999999998764 66778888888876532 1111111111 32222 11 11112112
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCc---hHHHHHHHHHhcCc
Q 020874 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGP 216 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~---~~~~~~~l~~~~~~ 216 (320)
+ ......... +.+...+.. ..++||+.++|+.|+++|++++++||.. ...+...++.+++.
T Consensus 79 ~------~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 79 V------DVELVKRAT--------ARAILNVDE--SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp C------CHHHHHHHH--------HHHHHHCCG--GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred C------CHHHHHHHH--------HHHHHhccc--cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 1 111111111 111121112 2358999999999999999999999999 88889999999888
Q ss_pred ccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc
Q 020874 217 ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295 (320)
Q Consensus 217 ~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~ 295 (320)
.+|+ .++++++++..||+|++|+.+++++|++|+++++|||+. ||+++|+.+|+.++++++++...+....++++++
T Consensus 143 ~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~ 220 (235)
T 2om6_A 143 EFID--KTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP 220 (235)
T ss_dssp GGCS--EEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES
T ss_pred HHhh--hheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh
Confidence 8888 788888889999999999999999999999999999999 9999999999999999988654444456899999
Q ss_pred CCCCChhhHHhh
Q 020874 296 CIGDPPEERFDL 307 (320)
Q Consensus 296 ~l~el~~~l~~~ 307 (320)
++.|+.+.+.++
T Consensus 221 ~~~el~~~l~~~ 232 (235)
T 2om6_A 221 SIANLKDVIELI 232 (235)
T ss_dssp SGGGHHHHHHHT
T ss_pred hHHHHHHHHHHH
Confidence 999988876554
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-29 Score=215.66 Aligned_cols=214 Identities=15% Similarity=0.200 Sum_probs=157.8
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHH----------------hcCcHHH-----HHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK----------------IGGGKER-----MTAYF 135 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----------------~g~~~~~-----~~~~~ 135 (320)
+|+|+||+||||+|+... +..++.++++++|+... .+.+...+. .|..... +...+
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLEVE--PSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTF 77 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHH
Confidence 479999999999998874 66789999999988743 222222110 1111111 11222
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcC
Q 020874 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215 (320)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~ 215 (320)
...+. ...... .....+.+........+.++||+.++|+.|+++|++++++||.... +...++.+++
T Consensus 78 ~~~~~-----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl 144 (263)
T 3k1z_A 78 HLAGV-----QDAQAV-------APIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGL 144 (263)
T ss_dssp HHTTC-----CCHHHH-------HHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTC
T ss_pred HHcCC-----CCHHHH-------HHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCc
Confidence 22211 011111 1111222222222223578999999999999999999999998775 6889999988
Q ss_pred cccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcc---cccCCC
Q 020874 216 PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEE---DFLNAD 291 (320)
Q Consensus 216 ~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~---~~~~a~ 291 (320)
..+|+ .++++++++..||+|.+|+.+++++|++|++++||||+. +|+.+|+++|+.+|+++++..... ....++
T Consensus 145 ~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad 222 (263)
T 3k1z_A 145 REHFD--FVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKE 222 (263)
T ss_dssp GGGCS--CEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGG
T ss_pred HHhhh--EEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCc
Confidence 88998 888898889999999999999999999999999999997 999999999999999998875543 224799
Q ss_pred eeccCCCCChhhHHhhh
Q 020874 292 AVFDCIGDPPEERFDLA 308 (320)
Q Consensus 292 ~vi~~l~el~~~l~~~~ 308 (320)
++++++.|+.+.|.++.
T Consensus 223 ~v~~~l~el~~~l~~~~ 239 (263)
T 3k1z_A 223 HILPSLAHLLPALDCLE 239 (263)
T ss_dssp GEESSGGGHHHHHHHHH
T ss_pred eEeCCHHHHHHHHHHHH
Confidence 99999999999888765
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=209.62 Aligned_cols=211 Identities=15% Similarity=0.169 Sum_probs=155.7
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCC-chhHH-HHHHHhcC-----------cH-----HHHHHHHh
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW-DVDLY-GELLKIGG-----------GK-----ERMTAYFN 136 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~-~~~~~-~~~~~~g~-----------~~-----~~~~~~~~ 136 (320)
+++|+|+||+||||+|+... +..++.++++++|..... ..+.+ ..+..... .. ..+...+.
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 36899999999999998874 677888899998775310 12222 11111100 00 01122222
Q ss_pred hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
..++. .... .....+.+.+.+. ....++||+.++|+.|+ .|++++++||.+...+...++.+++.
T Consensus 82 ~~~~~-----~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~ 146 (240)
T 3qnm_A 82 AVGVE-----DEAL--------AERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD 146 (240)
T ss_dssp HTTCC-----CHHH--------HHHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred HcCCC-----cHHH--------HHHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH
Confidence 22221 1111 1112222222222 22688999999999999 89999999999999999999999888
Q ss_pred ccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc
Q 020874 217 ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295 (320)
Q Consensus 217 ~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~ 295 (320)
.+|+ .++++++++.+||++.+|+.+++++|++|+++++|||++ +|+++|+++|+.+++++++.. ......||++++
T Consensus 147 ~~f~--~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~ 223 (240)
T 3qnm_A 147 RYFK--KIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIH 223 (240)
T ss_dssp GGCS--EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEES
T ss_pred hhce--eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEEC
Confidence 8898 889999999999999999999999999999999999996 999999999999999998876 334468999999
Q ss_pred CCCCChhhH
Q 020874 296 CIGDPPEER 304 (320)
Q Consensus 296 ~l~el~~~l 304 (320)
++.|+....
T Consensus 224 sl~e~~~~~ 232 (240)
T 3qnm_A 224 SLKELMNLL 232 (240)
T ss_dssp STHHHHHHT
T ss_pred CHHHHHHHH
Confidence 999987754
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=211.83 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=120.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++.|++++++||++...+...++.+++..+|+ .++++++++..||+|.+|+.+++++|++|+++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD--HVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS--EEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC--EEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 7889999999999999999999999999999999999998888898 88999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCeeccCCCCChhhHHh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~~ 306 (320)
++|||+.+|+.+|+++|+.++++.++.+..+.+ ..++++++++.|+.+.|.+
T Consensus 176 ~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 176 LFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence 999999999999999999999999887765554 5799999999998887654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=207.65 Aligned_cols=131 Identities=20% Similarity=0.192 Sum_probs=120.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||.+...+...++.+++..+|+ .++++++++..||++.+|+.+++++|++|+++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD--HLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc--eeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 7889999999999999999999999999999999999998888898 88999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~~~ 307 (320)
++|||+.+|+.+|+++|+.++++.++....+.. ..++++++++.|+.+.|.++
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCCC-
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999887665544 57999999999988766543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-28 Score=203.62 Aligned_cols=216 Identities=19% Similarity=0.263 Sum_probs=158.9
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... +..++.++++++|.... ..+.+.. ..|.........+... ........+
T Consensus 4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~--~~g~~~~~~~~~~~~~-------~~~~~~~~~ 72 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTGI-TDDMIKR--TIGKTLEESFSILTGI-------TDADQLESF 72 (225)
T ss_dssp -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHT--TTTSCHHHHHHHHHCC-------CCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCCC-CHHHHHH--HhCCcHHHHHHHHcCC-------CCHHHHHHH
Confidence 34799999999999998864 66778889998877532 2222222 2555555444443221 122223332
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
... ..+.+.+.+.. ...++||+.++++.|++.|++++++||.....+...++.++...+|+ .++++++.+..|
T Consensus 73 ~~~----~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k 145 (225)
T 3d6j_A 73 RQE----YSKEADIYMNA-NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHK 145 (225)
T ss_dssp HHH----HHHHHHHHTGG-GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS--EEECGGGCSSCT
T ss_pred HHH----HHHHHHHhccc-cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee--eeeehhhcCCCC
Confidence 222 22223332222 25678999999999999999999999999988999999988777787 788888888999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccccc--CCCeeccCCCCChhhHHhhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL--NADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~--~a~~vi~~l~el~~~l~~~~ 308 (320)
|++.+|..+++++|++++++++|||+.+|+.||+.+|+.++++.++.+..+.+. .||++++++.|+.+.+..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 221 (225)
T 3d6j_A 146 PDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKS 221 (225)
T ss_dssp TSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC-------
T ss_pred CChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999998876655543 49999999999988876654
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-27 Score=200.11 Aligned_cols=213 Identities=24% Similarity=0.426 Sum_probs=159.2
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
++|+|+||+||||+|+... +..++.++++++|..... .+.+.. ..|...... ..++...++.. .. ..++
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~---~~---~~~~ 77 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-RNELPD--TLGLRIDMVVDLWYARQPWNG---PS---RQEV 77 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGG-GGGSCC--CTTCCHHHHHHHHHHHSCCSS---SC---HHHH
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCCh-HHHHHH--HhCCCHHHHHHHHHHHcCCCc---cC---HHHH
Confidence 4799999999999998874 667788889988876431 111111 144444433 33333333211 11 1222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
...+... +.+.+.. ...++||+.++|+.|++.|++++++||.....+...++.+++..+|+ .++++++.+..|
T Consensus 78 ~~~~~~~----~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~k 150 (226)
T 1te2_A 78 VERVIAR----AISLVEE-TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK 150 (226)
T ss_dssp HHHHHHH----HHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred HHHHHHH----HHHHHhc-cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc--EEEeccccCCCC
Confidence 2222222 1121111 16788999999999999999999999999988999999988888887 788888889999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc-cccCCCeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE-DFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~-~~~~a~~vi~~l~el~~~l~ 305 (320)
|++..++.+++++|++++++++|||+.+|+++|+.+|+.++++.++.+..+ ....|+++++++.|+.+.++
T Consensus 151 p~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~~ 222 (226)
T 1te2_A 151 PHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222 (226)
T ss_dssp TSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHH
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHHh
Confidence 999999999999999999999999999999999999999999998875543 45679999999999887554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=203.64 Aligned_cols=131 Identities=20% Similarity=0.247 Sum_probs=118.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||++...+...++.+++..+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD--SCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC--EEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 7889999999999999999999999999999999999998888888 88999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCC-CeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNA-DAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a-~~vi~~l~el~~~l~~~ 307 (320)
++|||+.+|+.+|+++|+.++++.+++........+ +++++++.|+.+.+.++
T Consensus 182 ~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 235 (240)
T 2no4_A 182 CFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKN 235 (240)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC-
T ss_pred EEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHh
Confidence 999999999999999999999999887633223467 99999999988766543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=206.83 Aligned_cols=131 Identities=21% Similarity=0.214 Sum_probs=122.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++. ++++++||++...+...++.+++..+|+ .++++++++..||++.+|+.+++++|++|+++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD--SITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc--eeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 67899999999999999 9999999999999999999998888898 88888888999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhhh
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~~ 308 (320)
++|||+. +|+.+|+++|+.++++.+++...+.+..|+++++++.|+.+.+.++.
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~ 230 (234)
T 3u26_A 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELN 230 (234)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC
T ss_pred EEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHh
Confidence 9999998 99999999999999999998877777799999999999998877654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=203.18 Aligned_cols=194 Identities=15% Similarity=0.128 Sum_probs=145.9
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... |.++++++|+..... ....+ ... .... ...
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~~~~--~~~~~--------------~~~--------~~~~-~~~ 53 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPAEDD--ILTHL--------------AAL--------PADE-SAA 53 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCTTSC--HHHHH--------------HHS--------CHHH-HHH
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCchHH--HHHHH--------------hcC--------ChHH-HHH
Confidence 56899999999999998763 556777888764421 11111 111 0111 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
...+. +.+.+.+. ....++||+.++|+.|+++|++++++||+....+...++.+++..+|+...+++.+. +.+|
T Consensus 54 ~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~k 127 (205)
T 3m9l_A 54 KHAWL----LEHERDLA-QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPK 127 (205)
T ss_dssp HHHHH----HHTHHHHE-EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCT
T ss_pred HHHHH----HHHHHHHh-hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCC
Confidence 11111 11111111 225789999999999999999999999999999999999999888883216777776 8999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
|++++|+.+++++|++++++++|||+.+|+++|+++|+.+|++.++... ....||++++++.||...+.+
T Consensus 128 p~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 128 PHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999877643 335699999999998876654
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=202.31 Aligned_cols=131 Identities=21% Similarity=0.231 Sum_probs=116.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||.+...+...++.+++..+|+ .++++++++.+||+|++|+.+++++|++|+++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh--eEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 6789999999999999999999999999999999999998888888 88899989999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~~~ 307 (320)
++|||+.+|+.+|+++|+.++++.++....+.. ..++++++++.|+.+.+.+.
T Consensus 172 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 225 (232)
T 1zrn_A 172 LFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETA 225 (232)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC---
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhh
Confidence 999999999999999999999999876654433 57999999998887765543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=198.93 Aligned_cols=201 Identities=17% Similarity=0.208 Sum_probs=150.7
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhc-CcHHHHHHHHh-hcCCCCCCCCCHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG-GGKERMTAYFN-KTGWPEKAPSDEEERK 152 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 152 (320)
+++|+|+||+||||+|+... +..++.++++++|... ........ .| .+...+.+.+. ...+ ...
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~------~~~--- 67 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPY--DKEKVREF--IFKYSVQDLLVRVAEDRNL------DVE--- 67 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCC--CHHHHHHH--HHHSCHHHHHHHHHHHHTC------CHH---
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--HccccHHHHHHHhhchhhc------cHH---
Confidence 35799999999999998874 6677888888887743 33333333 34 44444333332 1111 011
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
.... ....+.+.+. ....++||+.++|+.|+++|++++++||.....+. .++.++...+|+ .++++++.+.
T Consensus 68 -~~~~----~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~~~ 138 (207)
T 2go7_A 68 -VLNQ----VRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSGFV 138 (207)
T ss_dssp -HHHH----HHHHHHTTCG-GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGCCC
T ss_pred -HHHH----HHHHHHHhcc-ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcCCC
Confidence 1111 1111111111 22567999999999999999999999999988888 888888778887 7888888889
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
.||++++|+.+++++|++++++++|||+.+|+.+|+.+|+.+|++.++. . .|+++++++.|+.+.+
T Consensus 139 ~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 139 RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISRIF 204 (207)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHHHT
T ss_pred CCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998776 3 6999999999987655
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=212.79 Aligned_cols=123 Identities=16% Similarity=0.125 Sum_probs=108.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh---cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~---~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..++||+.++|+.|+++|++++|+||++...++.+++.+ ++..+|+ .++++ +++ +||+|++|+.+++++|++|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd--~i~~~-~~~-~KP~p~~~~~~~~~lg~~p 204 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD--GHFDT-KIG-HKVESESYRKIADSIGCST 204 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS--EEECG-GGC-CTTCHHHHHHHHHHHTSCG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc--EEEec-CCC-CCCCHHHHHHHHHHhCcCc
Confidence 678999999999999999999999999998888888854 4778888 78888 778 9999999999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccc-c-cCCCeeccCCCCCh
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED-F-LNADAVFDCIGDPP 301 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~-~-~~a~~vi~~l~el~ 301 (320)
+++|||||+.+|+.+|+++|+.+|++.++...... . ..++++++++.|+.
T Consensus 205 ~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 205 NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred ccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999999999999999999999999875543322 2 45889999998874
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=205.56 Aligned_cols=217 Identities=16% Similarity=0.207 Sum_probs=157.0
Q ss_pred CCceEEEEeCCCccccCCc-cchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHH-----------hhcCCCC
Q 020874 75 VLPSALLFDCDGVLVDTEK-DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-----------NKTGWPE 142 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~ 142 (320)
+++|+|+||+||||+|+.. . +..++.++++++|+... .+.+.. ..|.........+ ...+.
T Consensus 4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~~~--~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 76 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVAIT--AEEARK--PMGLLKIDHVRALTEMPRIASEWNRVFRQ-- 76 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCCCC--HHHHHT--TTTSCHHHHHHHHHHSHHHHHHHHHHHSS--
T ss_pred CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCCCC--HHHHHH--HhccchHHHHHHhcccHHHHHHHHHHhCC--
Confidence 3579999999999999876 3 56788999999887642 222222 1343332222111 11111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-cc
Q 020874 143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK 221 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~ 221 (320)
........++...+.. .+...+. ....++||+.++++.|++.|++++++||.....+...++.++...++ +
T Consensus 77 --~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~- 148 (267)
T 1swv_A 77 --LPTEADIQEMYEEFEE----ILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD- 148 (267)
T ss_dssp --CCCHHHHHHHHHHHHH----HHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred --CCCHHHHHHHHHHHHH----HHHHhhc-cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChH-
Confidence 1122333333322222 2222121 22678999999999999999999999999988888899888766665 5
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC-----------------
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA----------------- 283 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~----------------- 283 (320)
.++++++++.+||++.+|..+++++|+++ +++++|||+.||+.+|+.+|+.++++.+++..
T Consensus 149 -~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T 1swv_A 149 -FLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 227 (267)
T ss_dssp -CCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHH
T ss_pred -heecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhh
Confidence 67788888999999999999999999999 99999999999999999999999999998763
Q ss_pred ------cccc--cCCCeeccCCCCChhhHHhh
Q 020874 284 ------EEDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 284 ------~~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
.+.+ ..||++++++.|+.+.+.++
T Consensus 228 ~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 228 EKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred hhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 1222 35999999999998876544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-28 Score=204.38 Aligned_cols=208 Identities=20% Similarity=0.201 Sum_probs=151.7
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHH-h---------cCc-----HHHHHHHHhhcC
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK-I---------GGG-----KERMTAYFNKTG 139 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~---------g~~-----~~~~~~~~~~~~ 139 (320)
+++|+|+||+||||+|+... +..++.++++++|.... .+.+...+. . +.. ...+..++...+
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKTFT--SDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWG 80 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCCCC--HHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhC
Confidence 46899999999999998874 67788899998887753 222222111 0 000 111222223333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc
Q 020874 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA 219 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~ 219 (320)
.. ..... .+.+...+. ...++||+.++|+.|++ |++++++||.+...+...++.+ ..+|
T Consensus 81 ~~----~~~~~------------~~~~~~~~~--~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l--~~~f 139 (240)
T 3smv_A 81 LE----PDAAE------------REEFGTSVK--NWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL--GVEF 139 (240)
T ss_dssp CC----CCHHH------------HHHHHTGGG--GCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTT--CSCC
T ss_pred CC----CCHHH------------HHHHHHHHh--cCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhc--CCcc
Confidence 21 11111 111211111 26889999999999999 7999999999998888888874 4577
Q ss_pred cceeEEeCCCCCCCCCCHHHHHHH---HHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCC-------CCCccc-c
Q 020874 220 EKIQIFAGDVVPRKKPDPAIYTLA---ASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSS-------YTAEED-F 287 (320)
Q Consensus 220 ~~~~i~~~d~~~~~KP~~~~~~~~---~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g-------~~~~~~-~ 287 (320)
+ .++++++++..||+|++|+.+ ++++|++|+++++|||+. +|+.+|+++|+.+++++.+ +..... .
T Consensus 140 d--~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~ 217 (240)
T 3smv_A 140 D--HIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRM 217 (240)
T ss_dssp S--EEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSC
T ss_pred C--EEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCC
Confidence 7 888999999999999999999 899999999999999997 9999999999999999865 222222 3
Q ss_pred cCCCeeccCCCCChhhHHhhh
Q 020874 288 LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 288 ~~a~~vi~~l~el~~~l~~~~ 308 (320)
..||++++++.|+.+.+.+++
T Consensus 218 ~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 218 PNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp CCCSEEESSHHHHHHHHHHHH
T ss_pred CCCCEEeCCHHHHHHHHHHHh
Confidence 679999999999999887764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-28 Score=207.11 Aligned_cols=217 Identities=19% Similarity=0.146 Sum_probs=153.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... +..++.++++++|...... ...... .+.....+..++... .. .........+.
T Consensus 20 m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 92 (254)
T 3umc_A 20 QGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTLPCV-ELTDRW--RQQYKPAMDRVRNGQ-AP--WQHLDQLHRQS 92 (254)
T ss_dssp SSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCCCHH-HHHHHH--HHHTHHHHHHHHTTS-SC--CCCHHHHHHHH
T ss_pred cCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCCCHH-HHHHHH--HHHHHHHHHHHhccc-CC--cccHHHHHHHH
Confidence 56899999999999998774 6778999999998765322 112211 111222222222211 00 00111111121
Q ss_pred HHHHHHH--------HHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe
Q 020874 155 IASLHKR--------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA 226 (320)
Q Consensus 155 ~~~~~~~--------~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~ 226 (320)
+..+... ..+.+...+ ....++||+.++|+.|++. ++++++||.+...+...++.++.. |+ .+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~--~~~~ 165 (254)
T 3umc_A 93 LEALAGEFGLALDEALLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WD--MLLC 165 (254)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CS--EECC
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cc--eEEe
Confidence 2221111 111111111 1257899999999999986 999999999999999999998664 66 7888
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc----CCCCCcccc---cCCCeeccCCCC
Q 020874 227 GDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK----SSYTAEEDF---LNADAVFDCIGD 299 (320)
Q Consensus 227 ~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~----~g~~~~~~~---~~a~~vi~~l~e 299 (320)
+++++.+||++++|+.+++++|++|+++++|||+.+|+++|+.+|+.+++++ +|....+.+ ..||++++++.|
T Consensus 166 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~e 245 (254)
T 3umc_A 166 ADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLD 245 (254)
T ss_dssp HHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHH
T ss_pred ecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHH
Confidence 8888999999999999999999999999999999999999999999999999 666554443 579999999999
Q ss_pred ChhhHH
Q 020874 300 PPEERF 305 (320)
Q Consensus 300 l~~~l~ 305 (320)
|.+.|.
T Consensus 246 l~~~l~ 251 (254)
T 3umc_A 246 LHRQLA 251 (254)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 887653
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=202.99 Aligned_cols=218 Identities=17% Similarity=0.142 Sum_probs=154.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|+... +..++.++++++|...... ...... .+.....+..+..... . . ........+.
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~ 85 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEVDAV-AFADRW--RARYQPSMDAILSGAR-E-F-VTLDILHREN 85 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCHH-HHHHHH--HTTHHHHHHHHHTTSS-C-C-CCHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCCCHH-HHHHHH--HHhHHHHHHHHHhcCC-C-C-CCHHHHHHHH
Confidence 56899999999999998874 6778999999998765421 122211 2222222222222110 0 0 0111111111
Q ss_pred HHHHHHH-----------HHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccccee
Q 020874 155 IASLHKR-----------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ 223 (320)
Q Consensus 155 ~~~~~~~-----------~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~ 223 (320)
+..+.+. ..+.+...+ ....++||+.++|+.|++. ++++++||++...+...++.++.. |+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~--~ 158 (254)
T 3umg_A 86 LDFVLRESGIDPTNHDSGELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WD--V 158 (254)
T ss_dssp HHHHHHHTTCCGGGSCHHHHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CS--C
T ss_pred HHHHHHHhCCCcCcCCHHHHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--ee--E
Confidence 1111111 111111111 2367899999999999997 999999999999999999998664 66 6
Q ss_pred EEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc----CCCCCcccc---cCCCeeccC
Q 020874 224 IFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK----SSYTAEEDF---LNADAVFDC 296 (320)
Q Consensus 224 i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~----~g~~~~~~~---~~a~~vi~~ 296 (320)
+++++.++..||++.+|+.+++++|++++++++|||+.+|+++|+++|+.+++++ +|....+.+ ..+|+++++
T Consensus 159 ~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~ 238 (254)
T 3umg_A 159 IIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD 238 (254)
T ss_dssp CCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS
T ss_pred EEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC
Confidence 7788888999999999999999999999999999999999999999999999998 666554443 579999999
Q ss_pred CCCChhhHHh
Q 020874 297 IGDPPEERFD 306 (320)
Q Consensus 297 l~el~~~l~~ 306 (320)
+.||.+.|..
T Consensus 239 ~~el~~~l~~ 248 (254)
T 3umg_A 239 ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcC
Confidence 9999887654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=197.59 Aligned_cols=213 Identities=23% Similarity=0.275 Sum_probs=155.0
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
|+|+|+||+||||+|+... +..++.++++++|... .....+.. ..|.+.... ..++...+.. ...+...++
T Consensus 1 m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~--~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~ 72 (221)
T 2wf7_A 1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING-VDRQFNEQ--LKGVSREDSLQKILDLADKK----VSAEEFKEL 72 (221)
T ss_dssp CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC-CSHHHHTT--TTTCCHHHHHHHHHHHTTCC----CCHHHHHHH
T ss_pred CCcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC-CCHHHHHH--hCCCCHHHHHHHHHHHhCCC----CChHHHHHH
Confidence 3789999999999998874 6677888999887651 12222222 255554443 3344433321 234444443
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
...+. +.+...... ....++||+.++|+.|++.|++++++||. ..+...++.+++..+|+ .++++++++..
T Consensus 73 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~--~~~~~~~~~~~ 144 (221)
T 2wf7_A 73 AKRKN----DNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD--AIADPAEVAAS 144 (221)
T ss_dssp HHHHH----HHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS--EECCTTTSSSC
T ss_pred HHHHH----HHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc--eEeccccCCCC
Confidence 33322 222222221 12467899999999999999999999998 44677888888888888 78888999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCCh-hhHHhhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP-EERFDLA 308 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~-~~l~~~~ 308 (320)
||+|++|+.+++++|++|+++++|||+.+|++||+.+|+.+++++. . +.+..|+++++++.|+. ..+.+.+
T Consensus 145 Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~-~~~~~a~~v~~~~~el~~~~~~~~~ 216 (221)
T 2wf7_A 145 KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---P-EDLGDDIVIVPDTSHYTLEFLKEVW 216 (221)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---H-HHHCSSSEEESSGGGCCHHHHHHHH
T ss_pred CCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---H-HHhccccchhcCHHhCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999842 2 23348999999999984 4444444
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=203.21 Aligned_cols=131 Identities=16% Similarity=0.146 Sum_probs=113.9
Q ss_pred CCCChhHHHHHHHHHHcCC--eEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC----CCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGV--KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV----PRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~--~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~----~~~KP~~~~~~~~~~~~g 248 (320)
..++||+.++|+.|+++|+ +++++||+....+...++.+++..+|+ .+++++.. ..+||++++|+.+++++|
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD--GLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS--EEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc--eEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 6789999999999999999 999999999999999999999888998 77777654 567999999999999999
Q ss_pred CCC-CcEEEEecCHhhHHHHHHcCC-eEEEEcCCCCCcc--cccCCCeeccCCCCChhhHHhh
Q 020874 249 VDP-SSCVVVEDSTIGLAAAKAAGM-KCIVTKSSYTAEE--DFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 249 ~~~-~~~v~VGDs~~Di~~A~~aG~-~~v~v~~g~~~~~--~~~~a~~vi~~l~el~~~l~~~ 307 (320)
++| +++++|||+.+|+.+|+++|+ .++++.++..... ....++++++++.||.+.|.++
T Consensus 219 i~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 219 LARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDL 281 (282)
T ss_dssp CCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGG
T ss_pred CCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhh
Confidence 999 999999999999999999999 5667776654432 2357999999999999877664
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=196.89 Aligned_cols=124 Identities=23% Similarity=0.212 Sum_probs=112.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++. ++++++||++.. ++.+++..+|+ .++++++++.+||+|++|+.+++++|++|+++
T Consensus 104 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFA--FALCAEDLGIGKPDPAPFLEALRRAKVDASAA 175 (230)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCS--EEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHee--eeEEccccCCCCcCHHHHHHHHHHhCCCchhe
Confidence 78999999999999998 999999998765 67777888888 88888888999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
++|||+. +|+.+|+++|+.++++.++....+....++++++++.|+.+.|.+
T Consensus 176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 176 VHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred EEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 9999998 999999999999999999887655566899999999999887754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-27 Score=198.05 Aligned_cols=211 Identities=22% Similarity=0.288 Sum_probs=154.3
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHH-HHHHhhcCCCCCCCCCHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM-TAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
+++|+|+||+||||+|+... +..++.++++++|..... ...+... .|.....+ ..++...+.. ........
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~~ 73 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPISV-EEMGERF--AGMTWKNILLQVESEASIP----LSASLLDK 73 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCH-HHHHHHH--TTCCHHHHHHHHHHHHCCC----CCTHHHHH
T ss_pred CCccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCCCCH-HHHHHHH--hCCCHHHHHHHHHHHcCCC----CCHHHHHH
Confidence 45799999999999998874 667788889988876431 2222222 44444443 3333333332 11222222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-cceeEEeCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQIFAGDVVPR 232 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~~~i~~~d~~~~ 232 (320)
+...+ .+.+.. ...++||+.++|+.|+. +++++||.....+...++.+++..+| + .++++++++.
T Consensus 74 ~~~~~--------~~~~~~-~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~~ 139 (229)
T 2fdr_A 74 SEKLL--------DMRLER-DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP--HIYSAKDLGA 139 (229)
T ss_dssp HHHHH--------HHHHHH-HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT--CEEEHHHHCT
T ss_pred HHHHH--------HHHhhc-CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccc--eEEecccccc
Confidence 22211 111111 16789999999988864 89999999999999999999888888 6 7888888888
Q ss_pred C--CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC----cccc-c-CCCeeccCCCCChhhH
Q 020874 233 K--KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA----EEDF-L-NADAVFDCIGDPPEER 304 (320)
Q Consensus 233 ~--KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~----~~~~-~-~a~~vi~~l~el~~~l 304 (320)
+ ||++.+|+.+++++|++++++++|||+.+|+++|+.+|+.+|++.++... .+.+ + +|+++++++.|+.+.|
T Consensus 140 ~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 140 DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 9 99999999999999999999999999999999999999999999887653 1112 2 4999999999998877
Q ss_pred Hhh
Q 020874 305 FDL 307 (320)
Q Consensus 305 ~~~ 307 (320)
.++
T Consensus 220 ~~~ 222 (229)
T 2fdr_A 220 AAM 222 (229)
T ss_dssp HHH
T ss_pred HHh
Confidence 655
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=198.55 Aligned_cols=126 Identities=18% Similarity=0.191 Sum_probs=113.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.+ |+.|+++ ++++++||++...+...++.+++..+|+ .++++++++..||+|++|+.+++++| |+++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~ 146 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK--GIFSAESVKEYKPSPKVYKYFLDSIG--AKEA 146 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTCHHHHHHHHHHHT--CSCC
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc--EEEehhhcCCCCCCHHHHHHHHHhcC--CCcE
Confidence 678999999 9999999 9999999999999999999998888888 78899989999999999999999999 9999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCccc-ccCCCeeccCCCCChhhHHh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED-FLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~-~~~a~~vi~~l~el~~~l~~ 306 (320)
+||||+.+|+++|+++|+.++++.++....+. ...++++++++.|+.+.+.+
T Consensus 147 ~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 199 (201)
T 2w43_A 147 FLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR 199 (201)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred EEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 99999999999999999999999987654433 34699999999998876654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=196.75 Aligned_cols=209 Identities=16% Similarity=0.076 Sum_probs=142.2
Q ss_pred CCC-ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHH--------HHhcCcHHHHH-----HHHhhcC
Q 020874 74 SVL-PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL--------LKIGGGKERMT-----AYFNKTG 139 (320)
Q Consensus 74 ~~~-~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~-----~~~~~~~ 139 (320)
|.+ +|+|+||+||||+|+... +..++..+.+.+..... .......+ ...+.+...+. ..+...+
T Consensus 4 M~~mik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 3ddh_A 4 MKELIKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYGT-SKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISN 81 (234)
T ss_dssp CTTTCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGSC-HHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTT
T ss_pred hhhcccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhc
Confidence 344 899999999999998874 55565555444322111 11111111 11333322211 1111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcC-CeEEEEcCCchHHHHHHHHHhcCccc
Q 020874 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPER 218 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G-~~i~lvT~~~~~~~~~~l~~~~~~~~ 218 (320)
. ....+...++...+. +.+ .....++||+.++|+.|+++| ++++++||.....+...++.+++..+
T Consensus 82 ~----~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~ 148 (234)
T 3ddh_A 82 G----KIAADIIRQIVDLGK--------SLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPY 148 (234)
T ss_dssp T----CCCHHHHHHHHHHHH--------HHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGG
T ss_pred C----CCCHHHHHHHHHHHH--------HHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhh
Confidence 1 123333333332221 111 123678999999999999999 99999999999999999999988888
Q ss_pred ccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEc----CCCCCcccccC-CCe
Q 020874 219 AEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTK----SSYTAEEDFLN-ADA 292 (320)
Q Consensus 219 ~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~----~g~~~~~~~~~-a~~ 292 (320)
|+ .+++. .||++++|+.+++++|++|+++++|||+. +|+.+|+++|+.++++. +++...+.... +|+
T Consensus 149 f~--~~~~~-----~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~ 221 (234)
T 3ddh_A 149 FD--HIEVM-----SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLK 221 (234)
T ss_dssp CS--EEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEE
T ss_pred hh--eeeec-----CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCce
Confidence 88 55543 58999999999999999999999999997 99999999999999994 44444443444 499
Q ss_pred eccCCCCChhhH
Q 020874 293 VFDCIGDPPEER 304 (320)
Q Consensus 293 vi~~l~el~~~l 304 (320)
+++++.|+.+.|
T Consensus 222 v~~~l~el~~~l 233 (234)
T 3ddh_A 222 QVKRLDDLLSLL 233 (234)
T ss_dssp ECSSGGGHHHHC
T ss_pred ecccHHHHHHhc
Confidence 999999988754
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=195.81 Aligned_cols=130 Identities=23% Similarity=0.282 Sum_probs=116.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+ |++++++||++...+...++.+++..+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc--EEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 678999999999999 89999999999999999999998888888 88899999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcC-----------------------CCCCccc-ccCCCeeccCCCCChhhHHhhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKS-----------------------SYTAEED-FLNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~-----------------------g~~~~~~-~~~a~~vi~~l~el~~~l~~~~ 308 (320)
+||||+.+|+++|+++|+.++++++ +....+. ...++++++++.|+.+.+.++.
T Consensus 168 ~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 168 LFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred EEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHHHHhc
Confidence 9999999999999999999999987 3332222 3579999999999998776654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=198.74 Aligned_cols=211 Identities=15% Similarity=0.030 Sum_probs=148.5
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHH---HcCCCC--CCc----hhHHHHHHHhcCcHHHHHHHHhh-----cCCC
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFK---EKELGV--TWD----VDLYGELLKIGGGKERMTAYFNK-----TGWP 141 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~---~~~~~~--~~~----~~~~~~~~~~g~~~~~~~~~~~~-----~~~~ 141 (320)
++|+|+||+||||+|+... +..++.++++ ++|+.. ... ...+......|.+...+...+.. .+.
T Consensus 12 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~- 89 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA- 89 (251)
T ss_dssp SCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT-
T ss_pred ceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC-
Confidence 5899999999999998874 6667777774 556553 111 11122212356666555444321 111
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc
Q 020874 142 EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~ 221 (320)
.........+. +.+.+.+ .....++||+.++|+.|+ .|++++++||+....+...++.+++..+|+
T Consensus 90 ---~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~- 155 (251)
T 2pke_A 90 ---RIEARDIQRIV--------EIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP- 155 (251)
T ss_dssp ---CCCHHHHHHHH--------HHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-
T ss_pred ---CCChHHHHHHH--------HHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-
Confidence 11122222221 1222222 223678999999999999 899999999999998999999998888887
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcc---c---ccCCCe-e
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEE---D---FLNADA-V 293 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~---~---~~~a~~-v 293 (320)
.+++ ..||+|++|+.+++++|++|+++++|||+. +|+.+|+++|+.+|++.+++.... . ...+++ +
T Consensus 156 -~i~~-----~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 229 (251)
T 2pke_A 156 -RIEV-----VSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLRE 229 (251)
T ss_dssp -CEEE-----ESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEE
T ss_pred -eeee-----eCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeee
Confidence 5554 258999999999999999999999999999 999999999999999988764211 1 246898 9
Q ss_pred ccCCCCChhhHHhhh
Q 020874 294 FDCIGDPPEERFDLA 308 (320)
Q Consensus 294 i~~l~el~~~l~~~~ 308 (320)
++++.|+.+.+.++.
T Consensus 230 i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 230 VPDPSGWPAAVRALD 244 (251)
T ss_dssp CSSGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhC
Confidence 999999988776554
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=204.06 Aligned_cols=207 Identities=23% Similarity=0.220 Sum_probs=153.6
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++|+|+||+||||+|+... +..++.++++++|. .....+. ....|.......+.+.... ........+
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~---~~~~~~~-~~~~G~~~~~~~~~~~~~~------~~~~~~~~~- 101 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPY---FDAEHVI-HISHGWRTYDAIAKFAPDF------ADEEYVNKL- 101 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTT---CCHHHHH-HHCTTCCHHHHHHHHCGGG------CCHHHHHHH-
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCC---CCHHHHH-HHhcCCCHHHHHHHHhccC------CcHHHHHHH-
Confidence 4799999999999999874 66778888888763 1222211 1124655554444432211 122222221
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.. .+.+.+. ....++||+.++|+.|++. |++++++||.....+...++.++.. .|+ .+++++++..+|
T Consensus 102 ---~~----~~~~~~~-~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~--~i~~~~~~~~~k 170 (275)
T 2qlt_A 102 ---EG----EIPEKYG-EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPE--YFITANDVKQGK 170 (275)
T ss_dssp ---HH----THHHHHC-TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCS--SEECGGGCSSCT
T ss_pred ---HH----HHHHHHh-cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccC--EEEEcccCCCCC
Confidence 11 1112221 2256789999999999999 9999999999999999999998664 455 688888889999
Q ss_pred CCHHHHHHHHHHcCC-------CCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccccc-CCCeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGV-------DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFL-NADAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~-------~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~-~a~~vi~~l~el~~~l~ 305 (320)
|+|++|+.+++++|+ +++++++|||+.+|+++|+++|+.+++|.++++..+... .|+++++++.|+.....
T Consensus 171 p~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~~~ 249 (275)
T 2qlt_A 171 PHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249 (275)
T ss_dssp TSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEECCC
T ss_pred CChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChhhh
Confidence 999999999999999 999999999999999999999999999999876544443 69999999999865433
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=191.43 Aligned_cols=126 Identities=20% Similarity=0.232 Sum_probs=106.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC-Cc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP-SS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~-~~ 253 (320)
..++||+.++|+.|+++|++++|+||.....+...+ + .+|+ .+++++++..+||+|++|..+++++|+.+ ++
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d--~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 107 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVND--WMIAAPRPTAGWPQPDACWMALMALNVSQLEG 107 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTT--TCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCC--EEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 578999999999999999999999999887663322 2 4566 78889988999999999999999999976 89
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCCc-----------------------ccc--cCCCeeccCCCCChhhHHhh
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE-----------------------EDF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~-----------------------~~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
++||||+.+|+++|+++|+.+|+|.+|+... ..+ .+++++++++.||.+.+.++
T Consensus 108 ~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~ 186 (196)
T 2oda_A 108 CVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLADI 186 (196)
T ss_dssp CEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999987521 111 36999999999998876543
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-27 Score=202.03 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=136.6
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHH-hcCcH---------HHHHHHHhhcCCCCCCC
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK-IGGGK---------ERMTAYFNKTGWPEKAP 145 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~---------~~~~~~~~~~~~~~~~~ 145 (320)
++|+|+||+||||+|+... +..++.++++++|+.... .+....+.. .|... ..+..++...+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~---- 75 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYDLDL-RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY---- 75 (220)
T ss_dssp CCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCCCCH-HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC----
T ss_pred CceEEEEcCCCceeccccc-HHHHHHHHHHHhCCCCCH-HHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC----
Confidence 4789999999999999874 667889999998876432 112222211 22211 0022333333321
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEE
Q 020874 146 SDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF 225 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~ 225 (320)
...+...++.+ .+ .......++||+.++|+.|+++|++++++||++. .+...++.+++..+|+ .++
T Consensus 76 ~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~--~~~ 141 (220)
T 2zg6_A 76 PSERLVKELKE--------AD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFD--ALA 141 (220)
T ss_dssp CCHHHHHHHHH--------TT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCS--EEC
T ss_pred CcHHHHHHHHH--------Hh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHee--EEE
Confidence 11111111111 00 0112257899999999999999999999999977 4788999999888998 888
Q ss_pred eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 226 AGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI-GLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 226 ~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~-Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
++++++..||+|++|+.+++++|++| +||||+.+ |+.+|+++|+.+|++.++.... .. +++++++.|+.+.|
T Consensus 142 ~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~-~~---~~~i~~l~el~~~l 214 (220)
T 2zg6_A 142 LSYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYP-DV---RDRVKNLREALQKI 214 (220)
T ss_dssp -----------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCT-TC---CSCBSSHHHHHHHH
T ss_pred eccccCCCCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCC-Cc---ceEECCHHHHHHHH
Confidence 99999999999999999999999988 99999998 9999999999999998653321 11 67788888887766
Q ss_pred Hhh
Q 020874 305 FDL 307 (320)
Q Consensus 305 ~~~ 307 (320)
.++
T Consensus 215 ~~~ 217 (220)
T 2zg6_A 215 EEM 217 (220)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=191.14 Aligned_cols=187 Identities=20% Similarity=0.180 Sum_probs=133.9
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHH---HHhc-CcHHHHHHHHhhcCCCCCCCCCHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL---LKIG-GGKERMTAYFNKTGWPEKAPSDEEER 151 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (320)
++|+|+||+||||+|+.. ...++..+++++|............. ...+ ...+.+...+... . ......+
T Consensus 3 ~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-- 75 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFY-Q--PRDFTPE-- 75 (200)
T ss_dssp CCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTT-S--CCSSCHH--
T ss_pred CceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHH-c--CCCCCHH--
Confidence 478999999999999875 35678888888887532111111100 0011 1112211111100 0 0000111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC
Q 020874 152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231 (320)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~ 231 (320)
.+.+.+... ..++||+.++|+.|+++| +++++||++...+...++.+++..+|+ .++++++++
T Consensus 76 -------------~~~~~~~~~-~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~--~~~~~~~~~ 138 (200)
T 3cnh_A 76 -------------DFRAVMEEQ-SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL--AFFTSSALG 138 (200)
T ss_dssp -------------HHHHHHHHT-CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS--CEEEHHHHS
T ss_pred -------------HHHHHHHhc-CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc--eEEeecccC
Confidence 111111111 568999999999999999 999999999999999999998888888 788888889
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccc
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~ 286 (320)
..||+|++|+.+++++|++|++++||||+.+|+++|+++|+.++++.++....+.
T Consensus 139 ~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~ 193 (200)
T 3cnh_A 139 VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREE 193 (200)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCchhhHHH
Confidence 9999999999999999999999999999999999999999999999876554433
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=187.04 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=111.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEE-----eCCCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIF-----AGDVVPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~-----~~d~~~~~K 234 (320)
..++||+.++|+.|+++|++++++||++. ..+...++.++ .+++ .++ .+++++..|
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~--~~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVD--AIFMCPHGPDDGCACRK 101 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCC--EEEEECCCTTSCCSSST
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--Ccee--EEEEcCCCCCCCCCCCC
Confidence 57899999999999999999999999986 56677888775 3444 344 357778999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCChhhHHh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el~~~l~~ 306 (320)
|+|++|+.+++++|++|++++||||+.+|+++|+++|+.+|++.+|+.....+ ..+|++++++.|+.+.+++
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998766654 5689999999998887754
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=190.40 Aligned_cols=119 Identities=16% Similarity=0.181 Sum_probs=97.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh--c---------CcccccceeEEeCCCCCCCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL--L---------GPERAEKIQIFAGDVVPRKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~--~---------~~~~~~~~~i~~~d~~~~~KP~~~~~~~~ 243 (320)
.+++||+.++|+. |++++|+||++...++..++.+ + +..+|+ .++.. .+...||+|++|+.+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~--~~f~~-~~~g~KP~p~~~~~a 196 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDI-NTSGKKTETQSYANI 196 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECH-HHHCCTTCHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc--eEEee-eccCCCCCHHHHHHH
Confidence 5789999999988 8999999999999999998876 3 444555 55544 331259999999999
Q ss_pred HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC
Q 020874 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP 300 (320)
Q Consensus 244 ~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el 300 (320)
++++|++|++|+||||+.+|+++|+++||.+|++.+..........++.+++++.||
T Consensus 197 ~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 197 LRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred HHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 999999999999999999999999999999999987433221112378899999885
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=188.23 Aligned_cols=128 Identities=20% Similarity=0.314 Sum_probs=115.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---HHHHHHHHHhcCcccccceeEEeCCCC----CCCCCCHHHHHHHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAGDVV----PRKKPDPAIYTLAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---~~~~~~l~~~~~~~~~~~~~i~~~d~~----~~~KP~~~~~~~~~~~~ 247 (320)
..++||+.++|+.|+++|++++|+||++. ..+...++.+++..+|+ .++++++. +..||+|++|+.+++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD--FIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE--EEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE--EEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 67899999999999999999999999987 88999999999989998 88888776 78999999999999999
Q ss_pred CCCCCcEEEEecC-HhhHHHHHHcCCeEEEEcCCCCCc--ccc--cCCCeecc--CCCCChhhH
Q 020874 248 GVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAE--EDF--LNADAVFD--CIGDPPEER 304 (320)
Q Consensus 248 g~~~~~~v~VGDs-~~Di~~A~~aG~~~v~v~~g~~~~--~~~--~~a~~vi~--~l~el~~~l 304 (320)
|++|++++||||+ .+|+.+|+++|+.+|++.++.... +.+ ..++++++ ++.||.+.|
T Consensus 111 ~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 111 QIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp TCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 9999999999999 699999999999999999887632 333 27999999 999998755
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=187.62 Aligned_cols=193 Identities=17% Similarity=0.162 Sum_probs=131.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHH-HH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER-KQ 153 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 153 (320)
.++|+|+||+||||+|+.. ..+.+.++++|+... .+....+.. ......+.... ...+.. ..
T Consensus 26 ~~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~~~--~~~~~~~~~-----~~~~~~~~~g~------~~~~~~~~~ 88 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR----ERCIENFKKIGFQNI--EEKFCTHQL-----DGIFLQQEKGL------ITPAEFRDG 88 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH----HHHHHHHHHHTCTTH--HHHHHHTHH-----HHHHHHHHTTC------SCHHHHHHH
T ss_pred CCCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCCcH--HHHHHHhcC-----cHHHHHHHCCC------CCHHHHHHH
Confidence 3589999999999999764 346677777777521 122211100 00111111110 011111 11
Q ss_pred HHHHHH-HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHH------HHhcCcccccceeEEe
Q 020874 154 FIASLH-KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV------SFLLGPERAEKIQIFA 226 (320)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l------~~~~~~~~~~~~~i~~ 226 (320)
+...+. ....+.+.+.+......++||+.++|+.|++. ++++++||++...+..++ +.+++..+|+ .+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd--~i~~ 165 (229)
T 4dcc_A 89 IREMMGKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFE--KTYL 165 (229)
T ss_dssp HHHHHTSCCCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCS--EEEE
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCC--EEEe
Confidence 111110 00011222333333346789999999999998 999999999998888555 5556666787 8888
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc
Q 020874 227 GDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287 (320)
Q Consensus 227 ~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~ 287 (320)
+++++..||+|++|+.+++++|++|++++||||+.+|+++|+++|+.+|+++++....+.+
T Consensus 166 ~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 166 SYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp HHHHTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred ecccCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 8889999999999999999999999999999999999999999999999998776554443
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=180.68 Aligned_cols=178 Identities=18% Similarity=0.183 Sum_probs=132.0
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
++|+|+||+||||+|+... +..++.++++++|.... .+.+.... .+.....+...+.. .... .
T Consensus 5 ~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~~~~---------~~~~----~ 67 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQAL-KVSTPFAIETFAPN---------LENF----L 67 (190)
T ss_dssp CCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHHH-HHCHHHHHHHHCTT---------CTTH----H
T ss_pred cccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHHH-ccccHHHHHHHhhh---------HHHH----H
Confidence 4799999999999998764 67788899999887643 23222221 22233333222111 0111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
..+ .+.+.+.... ..++||+.++|+.|+++|++++++||... .+...++.++...+|+ .++++++++.+||
T Consensus 68 ~~~----~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp 138 (190)
T 2fi1_A 68 EKY----KENEARELEH--PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT--EVVTSSSGFKRKP 138 (190)
T ss_dssp HHH----HHHHHHHTTS--CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE--EEECGGGCCCCTT
T ss_pred HHH----HHHHHHhcCc--CccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee--eeeeccccCCCCC
Confidence 111 1122222222 34899999999999999999999999865 6788899888888887 7888888899999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++++|+.+++++|++ ++++|||+.+|+++|+.+|+.+++++++.
T Consensus 139 ~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~ 182 (190)
T 2fi1_A 139 NPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 182 (190)
T ss_dssp SCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred CHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence 999999999999998 99999999999999999999999987654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=188.15 Aligned_cols=121 Identities=19% Similarity=0.130 Sum_probs=103.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEE----------eCCCCCCCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF----------AGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~----------~~d~~~~~KP~~~~~~~~~ 244 (320)
.+++||+.++|+.|+++|++++++||+....++..++.+++..+|+ .++ .++.+..+||++++|+.++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 6799999999999999999999999999999999999998888887 443 2234567999999999999
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+++|++|+++++|||+.+|+.+|+.+|+.+++ +......+.||+++++- ||.+
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~----~~~~~l~~~ad~v~~~~-dl~~ 204 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF----NAKEVLKQHATHCINEP-DLAL 204 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE----SCCHHHHTTCSEEECSS-BGGG
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE----CccHHHHHhcceeeccc-CHHH
Confidence 99999999999999999999999999999887 33444457899998753 4444
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-26 Score=197.91 Aligned_cols=207 Identities=13% Similarity=0.092 Sum_probs=138.0
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchh-HHHHHHH-hcCc-HHH-HHHHHhhcCCCCCCCCCHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD-LYGELLK-IGGG-KER-MTAYFNKTGWPEKAPSDEEE 150 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~-~~~-~~~~~~~~~~~~~~~~~~~~ 150 (320)
.++|+|+||+||||+|+... +..++.++++++|........ .+..+.. .|.. ... +..+...... .
T Consensus 9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~-- 78 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPR-------D-- 78 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTT-------C--
T ss_pred CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhcccc-------c--
Confidence 55789999999999999874 677889999988754211000 0111111 1211 011 1111100000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCC
Q 020874 151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230 (320)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~ 230 (320)
...+...+.+.... ....++||+.++|+.|+++| +++|+||++...+...++.+++..+|+. ++. +
T Consensus 79 ------~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~--~~~---~ 144 (231)
T 2p11_A 79 ------TRLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEG--RVL---I 144 (231)
T ss_dssp ------TGGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTT--CEE---E
T ss_pred ------hHHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCe--eEE---e
Confidence 00001111121111 12578999999999999999 9999999999999999999987777773 222 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh---hHHHHHHcCCeEEEEcCCCC--Ccccc--c-CCCeeccCCCCChh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI---GLAAAKAAGMKCIVTKSSYT--AEEDF--L-NADAVFDCIGDPPE 302 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~---Di~~A~~aG~~~v~v~~g~~--~~~~~--~-~a~~vi~~l~el~~ 302 (320)
+ ++|+.+++.+++ |++|++++||||+.+ |+.+|+++|+.+|++.+++. ..+.+ . .++++++++.|+.+
T Consensus 145 ~--~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~ 220 (231)
T 2p11_A 145 Y--IHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVE 220 (231)
T ss_dssp E--SSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGG
T ss_pred c--CChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHH
Confidence 2 334667777766 899999999999999 99999999999999998853 32222 2 49999999999988
Q ss_pred hHHhhhh
Q 020874 303 ERFDLAF 309 (320)
Q Consensus 303 ~l~~~~~ 309 (320)
.+.+++.
T Consensus 221 ~l~~~~~ 227 (231)
T 2p11_A 221 MDAEWLL 227 (231)
T ss_dssp CGGGGCC
T ss_pred HHHHHHH
Confidence 8776653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=186.07 Aligned_cols=200 Identities=18% Similarity=0.162 Sum_probs=129.7
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
+++|+|+||+||||+|++. +..+++.+|.+..... .+... .+... .+.+.+...
T Consensus 12 ~~~k~viFD~DGTLvd~~~------~~~~~~~~g~~~~~~~-~~~~~--~~~~~-~~~~~~~~~---------------- 65 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG------IDELAKICGVEDAVSE-MTRRA--MGGAV-PFKAALTER---------------- 65 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH------HHHHHHHTTCTTTC----------------CHHHHHHHH----------------
T ss_pred hhCCEEEEeCccccccccc------HHHHHHHhCCcHHHHH-HHHHH--HcCCc-cHHHHHHHH----------------
Confidence 4578999999999999874 4567778877643221 11111 11100 011111100
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc--ccccee------EEe
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAEKIQ------IFA 226 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~--~~~~~~------i~~ 226 (320)
...+ ....+.+.+.+.....+++||+.++|+.|+++|++++|+||++...++..++.+++.. +|+... ++.
T Consensus 66 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~ 144 (225)
T 1nnl_A 66 LALI-QPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYA 144 (225)
T ss_dssp HHHH-CCCHHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEE
T ss_pred HHHh-cCCHHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEe
Confidence 0000 0001112222223346899999999999999999999999999999999999997763 555211 123
Q ss_pred CCCCCC----CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 227 GDVVPR----KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 227 ~d~~~~----~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+.+... .||||++|+.+++++|+ ++++||||+.+|+.+|+++|+ +|++..+.........++++++++.|+.+
T Consensus 145 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 145 GFDETQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EECTTSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred cCCCCCcccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 333221 46888999999999998 789999999999999999999 88775433322233569999999999876
Q ss_pred hH
Q 020874 303 ER 304 (320)
Q Consensus 303 ~l 304 (320)
.+
T Consensus 222 ~l 223 (225)
T 1nnl_A 222 EL 223 (225)
T ss_dssp --
T ss_pred HH
Confidence 54
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-25 Score=184.74 Aligned_cols=104 Identities=14% Similarity=0.198 Sum_probs=95.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH------hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF------LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~------~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
..++||+.++|+.|++ |++++++||++...+...++. +++..+|+ .++++++++..||+|++|+.+++++|
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFD--KVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSS--EEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcC--eEEeecccCCCCCCHHHHHHHHHHhC
Confidence 4678999999999999 999999999999888888887 67777787 78888888999999999999999999
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 249 ~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++|+++++|||+.+|+.+|+++|+.+++++++.
T Consensus 165 ~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 165 MKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999987653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-24 Score=179.24 Aligned_cols=128 Identities=18% Similarity=0.229 Sum_probs=109.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---------------hHHHHHHHHHhcCcccccceeEE-e-----------C
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIF-A-----------G 227 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---------------~~~~~~~l~~~~~~~~~~~~~i~-~-----------~ 227 (320)
..++||+.++|+.|+++|++++++||++ ...+...++.+++. |+ .++ + +
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~--~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LD--GIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CS--EEEEECCBTTCSSGGGB
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eE--EEEECCcCCCCcccccC
Confidence 5788999999999999999999999998 46788889888765 55 333 2 3
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccc-cCCCeeccCCCCChhhHH
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDF-LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~ 305 (320)
++++.+||+|++|+.+++++|+++++++||||+.+|+.+|+++|+.+ |++.+++...+.. ..++++++++.|+.+.+.
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l~ 204 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIK 204 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHH
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999 9999987654433 469999999999887654
Q ss_pred h
Q 020874 306 D 306 (320)
Q Consensus 306 ~ 306 (320)
+
T Consensus 205 ~ 205 (211)
T 2gmw_A 205 K 205 (211)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-24 Score=180.04 Aligned_cols=106 Identities=25% Similarity=0.366 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH-hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~-~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..++||+.++|+.|+++|++++++||++...+...++. +++..+|+ .++++++++..||+|++|+.+++++|+++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSPSD 167 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhee--eEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 57899999999999999999999999887766655555 55666777 7888888889999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
++||||+.+|+.+|+++|+.+++++++..
T Consensus 168 ~~~vgD~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 168 TVFFDDNADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred eEEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence 99999999999999999999999887644
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=197.46 Aligned_cols=191 Identities=20% Similarity=0.216 Sum_probs=129.0
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHH-HHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER-KQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 154 (320)
++|+|+||+||||++... ...+...+...+..... ....+..+.....+..+.... ...+.. ..+
T Consensus 2 ~~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 67 (555)
T 3i28_A 2 TLRAAVFDLDGVLALPAV---FGVLGRTEEALALPRGL----LNDAFQKGGPEGATTRLMKGE-------ITLSQWIPLM 67 (555)
T ss_dssp --CEEEECTBTTTEESCT---HHHHHHHHHHTTCCTTH----HHHHHHTTGGGSHHHHHHTTS-------SCHHHHHHHH
T ss_pred ceEEEEEecCCeeecchh---HHHHHHHHHHhCCcHHH----HHHHHhccCcccchhHHhcCC-------CCHHHHHHHH
Confidence 589999999999997663 34567777777765321 222222222222222322211 112221 111
Q ss_pred HHHHHHH-------------HHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCC------chHHHHHHHHHhcC
Q 020874 155 IASLHKR-------------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS------NEKAVTAIVSFLLG 215 (320)
Q Consensus 155 ~~~~~~~-------------~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~------~~~~~~~~l~~~~~ 215 (320)
...+... ..+.+.+.... ..++||+.++|+.|+++|++++|+||+ ........+. ++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l 143 (555)
T 3i28_A 68 EENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--EL 143 (555)
T ss_dssp HHHHHHHHHHTTCCCCTTCCHHHHHHHHHHH--CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HH
T ss_pred HHHHHHhhhccCCCCCccccHHHHHHHhHhh--cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hh
Confidence 1111110 22233333333 688999999999999999999999998 3333333332 45
Q ss_pred cccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccc
Q 020874 216 PERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286 (320)
Q Consensus 216 ~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~ 286 (320)
..+|+ .++++++++..||+|++|+.+++++|++|++++||||+.+|+++|+++|+.+|++.++......
T Consensus 144 ~~~fd--~i~~~~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~~~~ 212 (555)
T 3i28_A 144 KMHFD--FLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKE 212 (555)
T ss_dssp HTTSS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHHHHHH
T ss_pred hhhee--EEEeccccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCccHHHH
Confidence 66888 8999999999999999999999999999999999999999999999999999999876554443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-25 Score=192.89 Aligned_cols=207 Identities=15% Similarity=0.153 Sum_probs=139.7
Q ss_pred CceEEEEeCCCccccCCccchHHH--HHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRIS--FNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
++|+|+||+||||+|+... +..+ +.+.+++.|+....... ..|++...+...+...|+.... ......
T Consensus 2 ~~k~i~fDlDGTLl~~~~~-~~~~~~~~~~l~~~g~~~~~~t~------~~g~~~~~~~~~~~~~g~~~~~---~~~~~~ 71 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVA-VPGAAEFLHGIMDKGLPLVLLTN------YPSQTGQDLANRFATAGVDVPD---SVFYTS 71 (250)
T ss_dssp CCCEEEEECBTTTEETTEE-CTTHHHHHHHHHHTTCCEEEEES------CCSCCHHHHHHHHHHTTCCCCG---GGEEEH
T ss_pred CccEEEEcCcceEEeCCEe-CcCHHHHHHHHHHcCCcEEEEEC------CCCCCHHHHHHHHHHcCCCCCH---HHeEcH
Confidence 4799999999999998875 3344 44556677776432100 0255666666666665542110 000000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEE---------------------------------EEcC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA---------------------------------VCST 200 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~---------------------------------lvT~ 200 (320)
. .. ...+.+.+ .....+++|+.++++.|++.|++++ ++||
T Consensus 72 ~--~~----~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~ 144 (250)
T 2c4n_A 72 A--MA----TADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN 144 (250)
T ss_dssp H--HH----HHHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESC
T ss_pred H--HH----HHHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence 0 00 00111111 1124568999999999999999999 8888
Q ss_pred CchHHHHHHHHHhc-CcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEc
Q 020874 201 SNEKAVTAIVSFLL-GPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 201 ~~~~~~~~~l~~~~-~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs-~~Di~~A~~aG~~~v~v~ 278 (320)
.+ ......++.++ ...+++ .+.+.+.+..+||++.+|+.+++++|++++++++|||+ .||++||+.+|+.+++|.
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~ 221 (250)
T 2c4n_A 145 PD-THGRGFYPACGALCAGIE--KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL 221 (250)
T ss_dssp CC-SBSSTTCBCHHHHHHHHH--HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred CC-CCCCCeeecchHHHHHHH--HHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEEC
Confidence 76 32222222222 222333 34455667889999999999999999999999999999 699999999999999999
Q ss_pred CCCCCcccc----cCCCeeccCCCCChh
Q 020874 279 SSYTAEEDF----LNADAVFDCIGDPPE 302 (320)
Q Consensus 279 ~g~~~~~~~----~~a~~vi~~l~el~~ 302 (320)
+|+...+.+ ..||++++++.|+.+
T Consensus 222 ~g~~~~~~~~~~~~~~~~v~~~~~el~~ 249 (250)
T 2c4n_A 222 SGVSSLDDIDSMPFRPSWIYPSVAEIDV 249 (250)
T ss_dssp SSSCCGGGGSSCSSCCSEEESSGGGCCC
T ss_pred CCCCChhhhhhcCCCCCEEECCHHHhhc
Confidence 998875554 469999999998754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-24 Score=188.28 Aligned_cols=124 Identities=12% Similarity=0.011 Sum_probs=100.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe----------CCCCCCCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA----------GDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~----------~d~~~~~KP~~~~~~~~~ 244 (320)
..++||+.++|+.|+++|++++|+||+....++.+++.+++..+|+. ++. ...+..+||++++|+.++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~ 255 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIRDNVLTDNITLPIMNAANKKQTLVDLA 255 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEeeCCeeeeeEecccCCCCCCHHHHHHHH
Confidence 78999999999999999999999999999999999999988877773 322 233456799999999999
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
+++|++|++++||||+.+|+.+|+++|+.+++ . ........++.++ .++.++...+
T Consensus 256 ~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~---~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 256 ARLNIATENIIACGDGANDLPMLEHAGTGIAW-K---AKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S---CCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred HHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-C---CCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 99999999999999999999999999998777 2 3333344566654 3555554443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=181.35 Aligned_cols=134 Identities=20% Similarity=0.153 Sum_probs=115.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC-----------CCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP-----------RKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~-----------~~KP~~~~~~~~ 243 (320)
..++||+.++|+.|+++|++++|+||++...+...++.+++..+|+...+++++++. .+||+|++|..+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a 293 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999888888622477776654 489999999999
Q ss_pred HHHcC--------------CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC---cccc--cCCCeeccCCCCChhhH
Q 020874 244 ASTLG--------------VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA---EEDF--LNADAVFDCIGDPPEER 304 (320)
Q Consensus 244 ~~~~g--------------~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~---~~~~--~~a~~vi~~l~el~~~l 304 (320)
++++| ++|++|+||||+.+|+.+|+++||.+|++.+|+.. .+.+ .+||++++++.|+...+
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l 373 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHHH
Confidence 99999 89999999999999999999999999999988753 2222 37999999999988766
Q ss_pred Hhhh
Q 020874 305 FDLA 308 (320)
Q Consensus 305 ~~~~ 308 (320)
.+.+
T Consensus 374 ~~~~ 377 (384)
T 1qyi_A 374 DNLL 377 (384)
T ss_dssp SCTT
T ss_pred HHHH
Confidence 5443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-25 Score=189.11 Aligned_cols=129 Identities=11% Similarity=0.057 Sum_probs=102.3
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce-eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++||+.++++.|+ .|+++ ++||.+.......+..++...+|+.. .+++++++..+||+|++|+.+++++|++|++++
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 6899999999999 89999 99998765444444444444444311 234567777899999999999999999999999
Q ss_pred EEecCH-hhHHHHHHcCCeEEEEcCCCCC-ccc---ccCCCeeccCCCCChhhHHhh
Q 020874 256 VVEDST-IGLAAAKAAGMKCIVTKSSYTA-EED---FLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 256 ~VGDs~-~Di~~A~~aG~~~v~v~~g~~~-~~~---~~~a~~vi~~l~el~~~l~~~ 307 (320)
||||+. +|+.+|+++|+.+|++.+|... .+. ...++++++++.|+.+.+.+.
T Consensus 201 ~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~ 257 (259)
T 2ho4_A 201 MIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQH 257 (259)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHHh
Confidence 999999 9999999999999999998543 222 246999999999988766543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=176.31 Aligned_cols=129 Identities=12% Similarity=0.075 Sum_probs=99.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc--ccccceeEEeCCC----CCCCCCCHHHHHH-HHHHc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDV----VPRKKPDPAIYTL-AASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~--~~~~~~~i~~~d~----~~~~KP~~~~~~~-~~~~~ 247 (320)
..++||+.++|+.|+++|++++++||+....++..++.++.. .++....++..+. +...||++..+.. +++.+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK 160 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence 458899999999999999999999999999999999999763 2343212232332 2457777654444 44556
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc--ccccCCCeeccCCCCChhhH
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--EDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~--~~~~~a~~vi~~l~el~~~l 304 (320)
|++++++++|||+.+|+.++ ++|+.++++.++.... .....||++++++.|+.+.|
T Consensus 161 ~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 161 GLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp GGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999999999999999998 6899988877665443 23357999999999887765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-23 Score=182.86 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=99.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH--HHH-HHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTA-IVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~--~~~-~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..++||+.++|+.|+ .|+++ ++||.+... ... .++..++..+|+ .+++++.++.+||+|++|+.+++++|++|
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVE--TATQTKPVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHTCCCEECSTTSHHHHHHHHHHHCSCG
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHH--HHhCCCccccCCCCHHHHHHHHHHcCCCH
Confidence 457999999999997 89998 889987632 111 111112334455 56666777889999999999999999999
Q ss_pred CcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCChh
Q 020874 252 SSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPPE 302 (320)
Q Consensus 252 ~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~~ 302 (320)
++++||||++ +|+.+|+++|+.+|+|.+|+...+.+. .||++++++.|+..
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 9999999995 999999999999999999987655443 69999999998765
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=171.88 Aligned_cols=128 Identities=12% Similarity=0.003 Sum_probs=102.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCC--C-CCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP--R-KKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~--~-~KP~~~~~~~~~~~~g~~~ 251 (320)
.+++||+.++|+.|+++ ++++++||+....+...++.+++..+|+. .++.+++.. . .||+|..+..+++++|..+
T Consensus 68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~-~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~ 145 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE-EEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc-eeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence 78899999999999999 99999999999999999999988877732 455555442 1 2488899999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCee-ccCCCCChhhHHhhh
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAV-FDCIGDPPEERFDLA 308 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~v-i~~l~el~~~l~~~~ 308 (320)
++++||||+.+|+.+|+++|+.+++ . ...... ..++++ ++++.++.+.|.+++
T Consensus 146 ~~~~~iGD~~~Di~~a~~aG~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 200 (206)
T 1rku_A 146 YRVIAAGDSYNDTTMLSEAHAGILF-H---APENVIREFPQFPAVHTYEDLKREFLKAS 200 (206)
T ss_dssp CEEEEEECSSTTHHHHHHSSEEEEE-S---CCHHHHHHCTTSCEECSHHHHHHHHHHHC
T ss_pred CEEEEEeCChhhHHHHHhcCccEEE-C---CcHHHHHHHhhhccccchHHHHHHHHHHh
Confidence 9999999999999999999998764 2 222222 345664 888888887766543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-23 Score=177.49 Aligned_cols=124 Identities=13% Similarity=0.094 Sum_probs=100.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC--------CCCCHHH-HH----
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR--------KKPDPAI-YT---- 241 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~--------~KP~~~~-~~---- 241 (320)
.+++||+.++|+.|+++|++++|+||++...++..++ ++..+ + .+++++.... +||+|.. ++
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 7899999999999999999999999999988888887 44444 4 6777765443 7898884 54
Q ss_pred ---HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cC-CCeeccCCCCChhhHHhh
Q 020874 242 ---LAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LN-ADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 242 ---~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~-a~~vi~~l~el~~~l~~~ 307 (320)
.+++++|+++++++||||+.+|+.+|+++|+.++. ++. .+.. .+ ++++++++.|+.+.+.++
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~--~~~~~~~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL--LNECREQNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH--HHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH--HHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence 88999999999999999999999999999999873 222 1222 22 889999999998877654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=166.21 Aligned_cols=124 Identities=20% Similarity=0.166 Sum_probs=97.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC---------CCCCCCCCHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD---------VVPRKKPDPAIYTLAAS 245 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d---------~~~~~KP~~~~~~~~~~ 245 (320)
..++||+.++|+.|+++|++++++|++....+...++.++...++.. .+...+ +...+++++..+..+++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN-RLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE-EEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe-eeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 56789999999999999999999999988888888888876555542 111111 11235678999999999
Q ss_pred HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC--CCCChhh
Q 020874 246 TLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC--IGDPPEE 303 (320)
Q Consensus 246 ~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~--l~el~~~ 303 (320)
++|++++++++|||+.+|+++|+.+|+.+++ + ........|++++++ +.|+...
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~---~-~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKIAF---C-AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEEEE---S-CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEEEE---C-CCHHHHhhcceeecchhHHHHHHh
Confidence 9999999999999999999999999997554 2 233334679999988 7777553
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=171.49 Aligned_cols=130 Identities=20% Similarity=0.240 Sum_probs=110.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC-----------C
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D 228 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~-----------d 228 (320)
..++||+.++|+.|+++|++++++||++. ..+...++.+++. |+. .+.+. +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~-~~~~~~~~~g~~~~~~~ 131 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDM-VLACAYHEAGVGPLAIP 131 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSE-EEEECCCTTCCSTTCCS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eee-EEEeecCCCCceeeccc
Confidence 57789999999999999999999999987 6788889888653 441 12232 5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccc-cCCCeeccCCCCChhhHHh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDF-LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~~ 306 (320)
++..+||+|.+|+.+++++|++|++++||||+.+|+.+|+++|+.+ |++.+|....+.. ..++++++++.|+.+.+.+
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~~ 211 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIET 211 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHHH
Confidence 6678999999999999999999999999999999999999999999 9999987654433 4689999999998887765
Q ss_pred h
Q 020874 307 L 307 (320)
Q Consensus 307 ~ 307 (320)
+
T Consensus 212 ~ 212 (218)
T 2o2x_A 212 L 212 (218)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-22 Score=184.51 Aligned_cols=118 Identities=19% Similarity=0.151 Sum_probs=98.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce-----eEEeC---CCCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAG---DVVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-----~i~~~---d~~~~~KP~~~~~~~~~~~ 246 (320)
++++||+.++|+.|+++|++++++||+....++.+++.+++..+|... ..+++ +++..+||++++|+.++++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~ 334 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQR 334 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHH
Confidence 689999999999999999999999999999999999999887666521 12222 2455689999999999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC 296 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~ 296 (320)
+|++|++++||||+.+|+.+|+++|+.+++ +......+.|++++.+
T Consensus 335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va~----~~~~~~~~~ad~~i~~ 380 (415)
T 3p96_A 335 AGVPMAQTVAVGDGANDIDMLAAAGLGIAF----NAKPALREVADASLSH 380 (415)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEEE----SCCHHHHHHCSEEECS
T ss_pred cCcChhhEEEEECCHHHHHHHHHCCCeEEE----CCCHHHHHhCCEEEcc
Confidence 999999999999999999999999998876 2344445678888653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-23 Score=180.17 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=97.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHH---HHHHhcCcccccceeEEeCCC-CCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA---IVSFLLGPERAEKIQIFAGDV-VPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~---~l~~~~~~~~~~~~~i~~~d~-~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..+++++.++++.| ..|+++ ++||........ .++..++..+|+ .+++.+. ++.+||++.+|+.+++++|++
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~kpk~~~~~~~~~~lgi~ 211 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIE--ASTGRKPDLIAGKPNPLVVDVISEKFGVP 211 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHH--HHHSCCCSEECSTTSTHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHH--HHhCCCCcccCCCCCHHHHHHHHHHhCCC
Confidence 35689999999999 778998 889875432111 111112223344 3455666 789999999999999999999
Q ss_pred CCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCChhhH
Q 020874 251 PSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPPEER 304 (320)
Q Consensus 251 ~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~~~l 304 (320)
|+++++|||+. +|++||+.+|+.++++.+|....+.+. .++++++++.|+.+.+
T Consensus 212 ~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 212 KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999999995 999999999999999999887655442 6999999998877643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-21 Score=161.32 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeE-----EeCC---CCCCCCCCHHHHHHHHHHc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI-----FAGD---VVPRKKPDPAIYTLAASTL 247 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i-----~~~d---~~~~~KP~~~~~~~~~~~~ 247 (320)
.++||+.++|+.|+++|++++|+||+....++.+++.+++..++..... +.+. ....+++++..++.+++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~ 171 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM 171 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 5799999999999999999999999999999999999987655542111 1111 2234677889999999999
Q ss_pred C---CCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 020874 248 G---VDPSSCVVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 248 g---~~~~~~v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
| ++|+++++|||+.+|+.+++.+|+.+++
T Consensus 172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 172 GLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp TCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred CCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 9 9999999999999999999999988876
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-22 Score=154.70 Aligned_cols=102 Identities=20% Similarity=0.262 Sum_probs=94.6
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~V 257 (320)
+||+.++|+.|+++|++++++||++...+...++.+++..+|+ .++++++.+..||++++|+.+++++|++|++++||
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~v 97 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD--KVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLV 97 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS--EEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc--EEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 4889999999999999999999999888889999988888888 78888888899999999999999999999999999
Q ss_pred ecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 258 EDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 258 GDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
||+.+|+.+|+++|+.+|++.++.
T Consensus 98 gD~~~di~~a~~~G~~~i~~~~~~ 121 (137)
T 2pr7_A 98 DDSILNVRGAVEAGLVGVYYQQFD 121 (137)
T ss_dssp ESCHHHHHHHHHHTCEEEECSCHH
T ss_pred cCCHHHHHHHHHCCCEEEEeCChH
Confidence 999999999999999999987653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-22 Score=163.01 Aligned_cols=121 Identities=17% Similarity=0.076 Sum_probs=93.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC-CCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-VPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~-~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..++||+.++|+.|+++|++++++||+....+... +.++...+++ .+...+. ....+|.+.....+++++ ++++
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMAN--RAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEE--EEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhhee--eEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 68899999999999999999999999988877777 7777665533 3332322 222455555556667766 8999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+++|||+.+|+.+|+.+|+.+++ ..+.. .||++++++.|+.+.|.++
T Consensus 153 ~i~iGD~~~Di~~~~~ag~~v~~-~~~~~------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 153 ILAMGDGYADAKMFERADMGIAV-GREIP------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp EEEEECTTCCHHHHHHCSEEEEE-SSCCT------TCSEEESSHHHHHHHHHTC
T ss_pred EEEEeCCHHHHHHHHhCCceEEE-CCCCc------cccEEEccHHHHHHHHHHh
Confidence 99999999999999999997544 33222 8999999999988877654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-22 Score=172.58 Aligned_cols=128 Identities=13% Similarity=0.176 Sum_probs=85.9
Q ss_pred ChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcccccce-eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 178 RPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 178 ~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~-~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++++.+.++.|++. |+++ ++++.........+...+...++... ..+..+.++.+||++.+|+.+++++|+++++++
T Consensus 133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i 211 (271)
T 2x4d_A 133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAV 211 (271)
T ss_dssp HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEE
Confidence 45666666666665 6666 55544322111000000000111100 122335566799999999999999999999999
Q ss_pred EEecCH-hhHHHHHHcCCeEEEEcCCCCCc-ccc---cCCCeeccCCCCChhhHHh
Q 020874 256 VVEDST-IGLAAAKAAGMKCIVTKSSYTAE-EDF---LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 256 ~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~-~~~---~~a~~vi~~l~el~~~l~~ 306 (320)
+|||+. ||+.||+.+|+.+++|.+|.... +.. ..++++++++.|+.+.|.+
T Consensus 212 ~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 212 MIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 999999 99999999999999999985433 222 3599999999998776644
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-21 Score=156.91 Aligned_cols=104 Identities=14% Similarity=0.203 Sum_probs=88.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC---------------chHHHHHHHHHhcCcccccceeEEeC-----CCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~---------------~~~~~~~~l~~~~~~~~~~~~~i~~~-----d~~~~~K 234 (320)
..++||+.++|+.|+++|++++|+||+ ....+...++.+++. |+ .++.+ ++++..|
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd--~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FD--EVLICPHLPADECDCRK 116 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EE--EEEEECCCGGGCCSSST
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--ee--EEEEcCCCCcccccccC
Confidence 578999999999999999999999998 567788899988765 65 55433 6778999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
|+|++|+.+++++|++|++++||||+.+|+++|+++|+.+|++.++..
T Consensus 117 P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~ 164 (176)
T 2fpr_A 117 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL 164 (176)
T ss_dssp TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcc
Confidence 999999999999999999999999999999999999999999987644
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-22 Score=177.12 Aligned_cols=129 Identities=14% Similarity=0.129 Sum_probs=101.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHH--H-HHHHHhc-CcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--T-AIVSFLL-GPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~--~-~~l~~~~-~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..++|++.++++.|++.|+ ++++||.+.... . ..++.++ +..+|+ .+++.+.+..+||+|.+|+.+++++|++
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~~~KP~~~~~~~~~~~lgi~ 231 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVE--TASGRQALVVGKPSPYMFECITENFSID 231 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHH--HHHTCCCEECSTTSTHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHH--HHhCCCceeeCCCCHHHHHHHHHHcCCC
Confidence 3568999999999999898 999999875433 1 1122222 233444 4556677788999999999999999999
Q ss_pred CCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----------cCCCeeccCCCCChhhHHh
Q 020874 251 PSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----------LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 251 ~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----------~~a~~vi~~l~el~~~l~~ 306 (320)
|++++||||+. +|+.+|+++|+.+++|.+|....+.+ ..+|++++++.|+.+.+.+
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~~ 298 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC--
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHHh
Confidence 99999999997 99999999999999999988764432 3699999999998876543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.2e-22 Score=171.58 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=99.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHH--HHHHHH-hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--TAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~--~~~l~~-~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
..+||++.++++.|+ +|+++ ++||.+.... ...+.. .++..+|+ .+++++.+..+||+|++|+.++++ ++|
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~~KP~~~~~~~~~~~--~~~ 202 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALK--VATNVEPIIIGKPNEPMYEVVREM--FPG 202 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSHHHHHHHHHH--STT
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHH--HHhCCCccEecCCCHHHHHHHHHh--CCc
Confidence 457899999999999 89998 9999876433 112211 22233455 566677777899999999999999 999
Q ss_pred CcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCChhhHH
Q 020874 252 SSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPPEERF 305 (320)
Q Consensus 252 ~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~~~l~ 305 (320)
++++||||++ +|+.+|+++|+.+|+|.+|....+.+. .++++++++.|+.+.+.
T Consensus 203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 203 EELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp CEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred ccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 9999999996 999999999999999999887655443 69999999999987654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=168.49 Aligned_cols=123 Identities=19% Similarity=0.109 Sum_probs=101.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccccee-----EEe---CCCCCCCCCCHHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFA---GDVVPRKKPDPAIYTLAAST 246 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~-----i~~---~d~~~~~KP~~~~~~~~~~~ 246 (320)
.+++||+.++|+.|++.|++++++||+....++.+++.+++..++...- .++ .+++..+||++++|+.++++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~ 256 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQ 256 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998877665321 111 23556789999999999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChh
Q 020874 247 LGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302 (320)
Q Consensus 247 ~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~ 302 (320)
+|++++++++|||+.+|+.||+.+|+.+++ +......+.|++++ ...++..
T Consensus 257 lgi~~~~~v~vGDs~nDi~~a~~aG~~va~----~~~~~~~~~a~~v~-~~~~l~~ 307 (335)
T 3n28_A 257 YDVEIHNTVAVGDGANDLVMMAAAGLGVAY----HAKPKVEAKAQTAV-RFAGLGG 307 (335)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEEE----SCCHHHHTTSSEEE-SSSCTHH
T ss_pred cCCChhhEEEEeCCHHHHHHHHHCCCeEEe----CCCHHHHhhCCEEE-ecCCHHH
Confidence 999999999999999999999999998877 34444456788776 4555544
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-22 Score=168.20 Aligned_cols=182 Identities=13% Similarity=0.067 Sum_probs=124.5
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
.++++|+|||||||+|+... +..+|.++++++. ..+.+.+. +.+... .+... .++..+++
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~---~~~~~--------~~~~~~~~ 61 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGG-FLRKFRARFPDQP---FIALEDRR-----GFWVSE---QYGRL--------RPGLSEKA 61 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSC---CCCGGGCC-----SSCHHH---HHHHH--------STTHHHHH
T ss_pred CCceEEEEeCCCCCccCcHH-HHHHHHHHHhcCC---CCCHHHhc-----CCcHHH---HHHhc--------CHHHHHHH
Confidence 34689999999999999874 7778888877652 12222211 112211 12211 01111222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPR 232 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d~~~~ 232 (320)
.. .|.+........++||+.++|+.|+++ |++++|+||++...++..++.+++.. +|+
T Consensus 62 ~~--------~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~------------ 121 (197)
T 1q92_A 62 IS--------IWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG------------ 121 (197)
T ss_dssp HH--------HHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC------------
T ss_pred HH--------HHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch------------
Confidence 11 111110011367899999999999999 99999999998888888888887665 663
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-HcCCeEEEEcCCCCCcccccCCCeeccCCC-CChhhH
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIG----LAAAK-AAGMKCIVTKSSYTAEEDFLNADAVFDCIG-DPPEER 304 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D----i~~A~-~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~-el~~~l 304 (320)
..+++++|+.|++++||||+..| +.+|+ ++|+.+|++.++++....+.....+++++. ++...+
T Consensus 122 --------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l 191 (197)
T 1q92_A 122 --------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAIL 191 (197)
T ss_dssp --------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHH
T ss_pred --------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHh
Confidence 45788899999999999999998 99999 999999999987766443333344789995 444433
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-23 Score=171.70 Aligned_cols=182 Identities=14% Similarity=0.081 Sum_probs=120.5
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA 156 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
.++|+||+||||+|+... +..++.++++ |++. .+.+.+... . .. ..+... + ++. .
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~-~~~~~~~~~---~--~~---~~~~~~-~-------~~~----~- 56 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH-VPLEQRRGF---L--AR---EQYRAL-R-------PDL----A- 56 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC-CCGGGCCSS---C--HH---HHHHHH-C-------TTH----H-
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC-CCHHHHHHh---h--HH---HHHHHH-h-------HHH----H-
Confidence 379999999999999874 6677777766 5541 122222111 0 01 111111 0 001 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCC
Q 020874 157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235 (320)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP 235 (320)
+...+.|.+........++||+.++|+.|+++ |++++++||++...+...++.+++ |+ .++++
T Consensus 57 ---~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~--~i~~~-------- 120 (193)
T 2i7d_A 57 ---DKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VE--QHLGP-------- 120 (193)
T ss_dssp ---HHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HH--HHHCH--------
T ss_pred ---HHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hh--hhcCH--------
Confidence 11122222110012367899999999999999 999999999998888889998865 55 44443
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-HcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIG----LAAAK-AAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~D----i~~A~-~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
.+++++|++|++++||||+..| +.+|+ ++|+.+|++.++++....+.....+++++.+....++
T Consensus 121 ------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 121 ------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp ------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHHH
T ss_pred ------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHHHh
Confidence 2688999999999999999988 99999 9999999998765544333323336788855444443
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-21 Score=153.55 Aligned_cols=118 Identities=16% Similarity=0.069 Sum_probs=95.2
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~V 257 (320)
.|+..++|+.|+++|++++++||++...+...++.+++..+|+ ..||+++.|+.+++++|+++++++||
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~-----------~~kp~~~~~~~~~~~~~~~~~~~~~v 106 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYT-----------GSYKKLEIYEKIKEKYSLKDEEIGFI 106 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE-----------CC--CHHHHHHHHHHTTCCGGGEEEE
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc-----------CCCCCHHHHHHHHHHcCCCHHHEEEE
Confidence 4677899999999999999999999999999999987655443 16999999999999999999999999
Q ss_pred ecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC--hhhHHhhhh
Q 020874 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP--PEERFDLAF 309 (320)
Q Consensus 258 GDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el--~~~l~~~~~ 309 (320)
||+.+|+.+|+++|+.+++. +........++++++++.+- ...+.+.++
T Consensus 107 GD~~~Di~~a~~ag~~~~~~---~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~ 157 (162)
T 2p9j_A 107 GDDVVDIEVMKKVGFPVAVR---NAVEEVRKVAVYITQRNGGEGALREVAELIH 157 (162)
T ss_dssp ECSGGGHHHHHHSSEEEECT---TSCHHHHHHCSEECSSCSSSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEec---CccHHHHhhCCEEecCCCCCcHHHHHHHHHH
Confidence 99999999999999997753 23333445799999999883 333444443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=154.04 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=92.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc-hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~-~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..++||+.++|+.|+++|++++++||++ ...+...++.+++..+|+ .++.. .+|+++.|+.+++++|++|++
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~--~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 139 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV--HREIY-----PGSKITHFERLQQKTGIPFSQ 139 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE--EEEES-----SSCHHHHHHHHHHHHCCCGGG
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc--eeEEE-----eCchHHHHHHHHHHcCCChHH
Confidence 5789999999999999999999999998 688999999998888887 44322 257899999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCCc
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~ 284 (320)
++||||+.+|+++|+++|+.+|++.+|+...
T Consensus 140 ~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~ 170 (187)
T 2wm8_A 140 MIFFDDERRNIVDVSKLGVTCIHIQNGMNLQ 170 (187)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSSCCHH
T ss_pred EEEEeCCccChHHHHHcCCEEEEECCCCChH
Confidence 9999999999999999999999999887643
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-21 Score=162.52 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC-C--CCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-D--VVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~-d--~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
.++||+.++|+.|+++|++++++||++...+...++.+ .++|+ .++.+ + .+...||+|+.|..+++++|+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l--~~~f~--~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~--- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL--ADNFH--IPATNMNPVIFAGDKPGQNTKSQWLQDKNI--- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH--HHHTT--CCTTTBCCCEECCCCTTCCCSHHHHHHTTE---
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH--HHhcC--ccccccchhhhcCCCCCHHHHHHHHHHCCC---
Confidence 45789999999999999999999999765555555542 33454 23222 1 245689999999999999998
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~ 284 (320)
++||||+.+|+++|+++|+.+|++.+++...
T Consensus 161 -~l~VGDs~~Di~aA~~aG~~~i~v~~g~~~~ 191 (211)
T 2b82_A 161 -RIFYGDSDNDITAARDVGARGIRILRASNST 191 (211)
T ss_dssp -EEEEESSHHHHHHHHHTTCEEEECCCCTTCS
T ss_pred -EEEEECCHHHHHHHHHCCCeEEEEecCCCCc
Confidence 9999999999999999999999999887654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.4e-22 Score=174.23 Aligned_cols=119 Identities=12% Similarity=0.181 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHH--H--HHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHc----CCC
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAV--T--AIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL----GVD 250 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~--~--~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~----g~~ 250 (320)
+...++++.|+++|++ +++||.+.... . ..++..++..+|+ .+++++++..+||+|++|+.+++++ |++
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 224 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIE--SILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS 224 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHH--HHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHH--HHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence 3667777789999999 99999876544 2 1123444556676 6777888888999999999999999 999
Q ss_pred CCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc--------cCCCeeccCCCCC
Q 020874 251 PSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF--------LNADAVFDCIGDP 300 (320)
Q Consensus 251 ~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~--------~~a~~vi~~l~el 300 (320)
|++++||||++ +|+.+|+++|+.+|+|.+|....+.+ ..+|++++++.||
T Consensus 225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 225 KREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999999996 99999999999999999988765543 3699999999987
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-20 Score=164.27 Aligned_cols=113 Identities=18% Similarity=0.165 Sum_probs=91.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++|+.|+++|++++++||.+...+...++.+++..+|+ .+ ++..| ..++++++.. +++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i-----~~~~K------~~~~~~l~~~-~~~ 227 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA--EV-----LPHQK------SEEVKKLQAK-EVV 227 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC--SC-----CTTCH------HHHHHHHTTT-CCE
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeee--ec-----ChHHH------HHHHHHHhcC-CeE
Confidence 5789999999999999999999999999999999999998776665 22 12222 6778889999 999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
+||||+.+|+.+|+++|+...+ ++........+|+++ +++.++.+.+
T Consensus 228 ~~vGDs~~Di~~a~~ag~~v~~---~~~~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 228 AFVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp EEEECTTTCHHHHHHSSEEEEE---CCCSCCSSCCSSEEESSSCTHHHHHHH
T ss_pred EEEECCHHHHHHHHHCCeeEEe---CCCCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 9999999999999999997433 344344456799999 8887776644
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-21 Score=162.24 Aligned_cols=112 Identities=17% Similarity=0.130 Sum_probs=93.8
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|+.|+++|++++|+||.+...++..++.+++..+|+. .||+++.++.+++++|+++++++||||+.+|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~-----------~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nD 152 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG-----------QSDKLVAYHELLATLQCQPEQVAYIGDDLID 152 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-----------CSSHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc-----------cCChHHHHHHHHHHcCcCcceEEEEcCCHHH
Confidence 88999999999999999999999999999987665552 1899999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC--hhhHHhhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP--PEERFDLAF 309 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el--~~~l~~~~~ 309 (320)
+.+++++|+.+++ ++........||+++.+..+- ...+.++++
T Consensus 153 i~~~~~ag~~~a~---~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll 197 (211)
T 3ij5_A 153 WPVMAQVGLSVAV---ADAHPLLLPKAHYVTRIKGGRGAVREVCDLIL 197 (211)
T ss_dssp HHHHTTSSEEEEC---TTSCTTTGGGSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHCCCEEEe---CCccHHHHhhCCEEEeCCCCCcHHHHHHHHHH
Confidence 9999999988765 444555567899999988654 344555543
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-20 Score=162.19 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=70.0
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCC
Q 020874 225 FAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGD 299 (320)
Q Consensus 225 ~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs-~~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~e 299 (320)
+..+....+||++.+|+.+++++|+++++++||||+ .+|+.+|+++|+.+|+|.+|+...+.+. .+|++++++.|
T Consensus 173 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~ 252 (264)
T 3epr_A 173 TRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDE 252 (264)
T ss_dssp HSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGG
T ss_pred hCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHH
Confidence 345566789999999999999999999999999999 5999999999999999999988877664 69999999999
Q ss_pred Chh
Q 020874 300 PPE 302 (320)
Q Consensus 300 l~~ 302 (320)
|..
T Consensus 253 l~~ 255 (264)
T 3epr_A 253 WTF 255 (264)
T ss_dssp CCS
T ss_pred Hhc
Confidence 864
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-21 Score=157.42 Aligned_cols=102 Identities=13% Similarity=0.010 Sum_probs=88.1
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|+.|+++|++++++||.+...++..++.+++..+|+. .||+++.++.+++++|+++++++||||+.+|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 107 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------VVDKLSAAEELCNELGINLEQVAYIGDDLND 107 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------cCChHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 78999999999999999999999999999977655542 3999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
+.+|+++|+.+++ ++......+.|++++.+-.+
T Consensus 108 i~~~~~ag~~~~~---~~~~~~~~~~ad~v~~~~~~ 140 (164)
T 3e8m_A 108 AKLLKRVGIAGVP---ASAPFYIRRLSTIFLEKRGG 140 (164)
T ss_dssp HHHHTTSSEEECC---TTSCHHHHTTCSSCCCCCTT
T ss_pred HHHHHHCCCeEEc---CChHHHHHHhCcEEeccCCC
Confidence 9999999998776 44455555779999887543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-21 Score=159.39 Aligned_cols=111 Identities=18% Similarity=0.116 Sum_probs=90.8
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|+.|+++|++++|+||.....++..++.+++. ++. + .||+++.++.+++++|+++++++||||+.+|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~------~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD 114 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLH------G-----IDRKDLALKQWCEEQGIAPERVLYVGNDVND 114 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEE------S-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEe------C-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHH
Confidence 889999999999999999999999999999765 332 1 2999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAF 309 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~ 309 (320)
+.+++.+|+.+++ ++........||+++.+-.+ +...+.++++
T Consensus 115 ~~~~~~ag~~v~~---~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 115 LPCFALVGWPVAV---ASAHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHHHSSEEEEC---TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHCCCeEEC---CChhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999977665 44555555679999987443 2444555543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.9e-20 Score=162.76 Aligned_cols=130 Identities=14% Similarity=0.095 Sum_probs=101.7
Q ss_pred CCChhHHHHHHHHHHc-CCeEEEEcCC---------------------chHHHHHHHHHhcCcccccce--------eEE
Q 020874 176 PLRPGVAKLIDQALEK-GVKVAVCSTS---------------------NEKAVTAIVSFLLGPERAEKI--------QIF 225 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~-G~~i~lvT~~---------------------~~~~~~~~l~~~~~~~~~~~~--------~i~ 225 (320)
..++++.++++.|++. |+++++.|+. ....+...++.++...++... ..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4579999999999998 9999999976 455666777777655455421 014
Q ss_pred eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--Chhh
Q 020874 226 AGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEE 303 (320)
Q Consensus 226 ~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~ 303 (320)
..+..+..++++..++++++++|++++++++|||+.+|+.+++.+|+.+++ ++........|++++++..+ +.+.
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~---~~~~~~~~~~a~~v~~~~~~~gv~~~ 278 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL---KNATQEAKNLHNLITDSEYSKGITNT 278 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC---TTCCHHHHHHCCCBCSSCHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE---CCccHHHHHhCCEEcCCCCcCHHHHH
Confidence 455667899999999999999999999999999999999999999966554 66666666779999888776 5565
Q ss_pred HHhhh
Q 020874 304 RFDLA 308 (320)
Q Consensus 304 l~~~~ 308 (320)
+.+++
T Consensus 279 ~~~~~ 283 (289)
T 3gyg_A 279 LKKLI 283 (289)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55544
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-21 Score=159.77 Aligned_cols=102 Identities=15% Similarity=0.069 Sum_probs=88.0
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|+.|+++|++++++||.+...++..++.+++..+|+. + ++||+.++.+++++|+++++++||||+.+|
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~--~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nD 122 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQG--R---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPD 122 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECS--C---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcC--c---------CChHHHHHHHHHHcCCChhHEEEECCCHHH
Confidence 88999999999999999999999999999987766652 1 777899999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
+.+++.+|+.+++ ++........||+++.+-.+
T Consensus 123 i~~~~~ag~~~~~---~~~~~~~~~~ad~v~~~~~~ 155 (189)
T 3mn1_A 123 LPVIRRVGLGMAV---ANAASFVREHAHGITRAQGG 155 (189)
T ss_dssp HHHHHHSSEEEEC---TTSCHHHHHTSSEECSSCTT
T ss_pred HHHHHHCCCeEEe---CCccHHHHHhCCEEecCCCC
Confidence 9999999987665 44555556789999988543
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.3e-20 Score=160.53 Aligned_cols=113 Identities=13% Similarity=0.061 Sum_probs=89.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
.++||+.++|+.|+++|++++++||.+...+...++.+++..+|+ .++..+ +....+...+.+ +++
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~~~~-------k~~~~k~~~~~~-----~~~ 209 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFA--EVLPHE-------KAEKVKEVQQKY-----VTA 209 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCCGGG-------HHHHHHHHHTTS-----CEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhH--hcCHHH-------HHHHHHHHHhcC-----CEE
Confidence 678999999999999999999999999999999999998877776 444443 234444444433 789
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhHH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEERF 305 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l~ 305 (320)
||||+.||+.|++.+|+ .+.+++.....+..+++++ +++.++...+.
T Consensus 210 ~vGD~~nDi~~~~~Ag~---~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~ 258 (280)
T 3skx_A 210 MVGDGVNDAPALAQADV---GIAIGAGTDVAVETADIVLVRNDPRDVAAIVE 258 (280)
T ss_dssp EEECTTTTHHHHHHSSE---EEECSCCSSSCCCSSSEECSSCCTHHHHHHHH
T ss_pred EEeCCchhHHHHHhCCc---eEEecCCcHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 99999999999999995 4445777777777888887 77777776654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=147.30 Aligned_cols=117 Identities=17% Similarity=0.054 Sum_probs=95.8
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~V 257 (320)
.++..++|+.|+++|++++++||.+...+...++.+++..+|+ ..||++..++.+++++|+++++++||
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~-----------~~k~k~~~~~~~~~~~~~~~~~~~~v 105 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFL-----------GKLEKETACFDLMKQAGVTAEQTAYI 105 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEE-----------SCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeec-----------CCCCcHHHHHHHHHHcCCCHHHEEEE
Confidence 3455689999999999999999999999999999997655443 14999999999999999999999999
Q ss_pred ecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC--hhhHHhhh
Q 020874 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP--PEERFDLA 308 (320)
Q Consensus 258 GDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el--~~~l~~~~ 308 (320)
||+.+|+.+++.+|+.+++ ++........|++++.+..+. ...+++.+
T Consensus 106 GD~~~Di~~~~~ag~~~~~---~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~ 155 (180)
T 1k1e_A 106 GDDSVDLPAFAACGTSFAV---ADAPIYVKNAVDHVLSTHGGKGAFREMSDMI 155 (180)
T ss_dssp ECSGGGHHHHHHSSEEEEC---TTSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCeEEe---CCccHHHHhhCCEEecCCCCCcHHHHHHHHH
Confidence 9999999999999999876 344444557899999988654 32344444
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-20 Score=160.07 Aligned_cols=81 Identities=22% Similarity=0.233 Sum_probs=67.3
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCC
Q 020874 225 FAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGD 299 (320)
Q Consensus 225 ~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs-~~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~e 299 (320)
+..+....+||++.+|+.+++++|++++++++|||+ .+|+.+|+.+|+.++++.+|+...+.+. .||++++++.|
T Consensus 174 ~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~e 253 (266)
T 3pdw_A 174 TGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTE 253 (266)
T ss_dssp HCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGG
T ss_pred hCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHH
Confidence 344556789999999999999999999999999999 6999999999999999999988776654 49999999999
Q ss_pred ChhhHH
Q 020874 300 PPEERF 305 (320)
Q Consensus 300 l~~~l~ 305 (320)
|.+.+.
T Consensus 254 l~~~~~ 259 (266)
T 3pdw_A 254 WIPYIE 259 (266)
T ss_dssp GHHHHH
T ss_pred HHHHhh
Confidence 987654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.7e-19 Score=145.06 Aligned_cols=112 Identities=14% Similarity=0.123 Sum_probs=93.2
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
.|+.|+++|++++|+||++...++..++.+++..+|. ..||++..++.+++++|+++++++||||+.||
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~-----------~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nD 128 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQ-----------GQDDKVQAYYDICQKLAIAPEQTGYIGDDLID 128 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEEC-----------SCSSHHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEee-----------CCCCcHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence 4889999999999999999999999999997765543 13999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC--hhhHHhhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP--PEERFDLAF 309 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el--~~~l~~~~~ 309 (320)
+.+++++|+.+++ ++..+...+.|++++.+-.+- ...+.++++
T Consensus 129 i~~~~~ag~~va~---~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il 173 (195)
T 3n07_A 129 WPVMEKVALRVCV---ADGHPLLAQRANYVTHIKGGHGAVREVCDLIL 173 (195)
T ss_dssp HHHHTTSSEEEEC---TTSCHHHHHHCSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHCCCEEEE---CChHHHHHHhCCEEEcCCCCCCHHHHHHHHHH
Confidence 9999999988765 455555567899999886543 345555554
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-19 Score=147.79 Aligned_cols=112 Identities=19% Similarity=0.186 Sum_probs=93.3
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
.|+.|+++|++++++||.+...+...++.+++..+|+. .||+++.++.+++++|+++++++||||+.+|
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~-----------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 122 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG-----------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPD 122 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-----------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-----------CCChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence 57889999999999999999999999999987665552 1999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC--hhhHHhhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP--PEERFDLAF 309 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el--~~~l~~~~~ 309 (320)
+.+++.+|+.+++ ++........|++++.+.++- ...+.++++
T Consensus 123 i~~~~~ag~~~~~---~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll 167 (191)
T 3n1u_A 123 LPLIQQVGLGVAV---SNAVPQVLEFADWRTERTGGRGAVRELCDLIL 167 (191)
T ss_dssp HHHHHHSSEEEEC---TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHCCCEEEe---CCccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999998754 444555557799999886543 455555554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-19 Score=158.04 Aligned_cols=75 Identities=31% Similarity=0.411 Sum_probs=68.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc--------CCCeeccCCCCC
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL--------NADAVFDCIGDP 300 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~--------~a~~vi~~l~el 300 (320)
...+||++.+|+.+++++|++++++++|||++ +|+.+|+++|+.+++|.+|+...+.+. .+|++++++.||
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 56799999999999999999999999999995 999999999999999999988776665 799999999988
Q ss_pred hhhH
Q 020874 301 PEER 304 (320)
Q Consensus 301 ~~~l 304 (320)
.+.|
T Consensus 263 ~~~l 266 (268)
T 3qgm_A 263 VEAL 266 (268)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 7754
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=139.86 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=87.5
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
+|+.|+++|++++++||.+...+...++.+++..+|. ..||++..|+.+++++|+++++++||||+.+|
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~-----------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~D 129 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ-----------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLID 129 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC-----------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec-----------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 7899999999999999999999999999987654443 25999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP 300 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el 300 (320)
+.+|+++|+.+++. +........|++++++..+.
T Consensus 130 i~~a~~ag~~~~~~---~~~~~~~~~ad~v~~~~~~~ 163 (188)
T 2r8e_A 130 WPVMEKVGLSVAVA---DAHPLLIPRADYVTRIAGGR 163 (188)
T ss_dssp HHHHTTSSEEEECT---TSCTTTGGGSSEECSSCTTT
T ss_pred HHHHHHCCCEEEec---CcCHHHHhcCCEEEeCCCCC
Confidence 99999999988763 33334445799999998553
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-18 Score=157.32 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=86.4
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCc------------hHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSN------------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~------------~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
++||+.++|+.|+++|++++|+||.+ ...+...++.+++. |+ .+++++++..+||+|.+|+.++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd--~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSTTSTTSSHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EE--EEEECCCCCCCCCCHHHHHHHH
Confidence 68999999999999999999999966 22377788888663 66 7889999999999999999999
Q ss_pred HHcC----CCCCcEEEEecCH-----------------hhHHHHHHcCCeEEEE
Q 020874 245 STLG----VDPSSCVVVEDST-----------------IGLAAAKAAGMKCIVT 277 (320)
Q Consensus 245 ~~~g----~~~~~~v~VGDs~-----------------~Di~~A~~aG~~~v~v 277 (320)
+++| +++++++||||+. .|+.+|+++|++++..
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 9998 9999999999997 8999999999998763
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-19 Score=157.96 Aligned_cols=114 Identities=17% Similarity=0.142 Sum_probs=96.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
.+++||+.++|+.|+++|++++++||.+...+..+++.+++..+|+ .++ |+.+..++++++..++++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~-----------p~~k~~~~~~l~~~~~~~ 201 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYS--NLS-----------PEDKVRIIEKLKQNGNKV 201 (263)
Confidence 5689999999999999999999999999999999999998877776 333 344577889999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
+||||+.+|+.+++++|+...| ++........+|+++ +++.++.+.+
T Consensus 202 ~~VGD~~~D~~aa~~Agv~va~---g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 202 LMIGDGVNDAAALALADVSVAM---GNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 9999999999999999965444 555445556799999 9999988754
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-18 Score=147.42 Aligned_cols=218 Identities=13% Similarity=0.101 Sum_probs=131.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHc---CCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCC----------
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP---------- 141 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------- 141 (320)
+++|+|+||+||||+|+... +...+.++++++ |+.... ..|++...+..++...++.
T Consensus 4 M~~kli~fDlDGTLl~~~~~-i~~~~~~al~~l~~~G~~~~i---------aTGR~~~~~~~~~~~~~~~~~~i~~nGa~ 73 (290)
T 3dnp_A 4 MSKQLLALNIDGALLRSNGK-IHQATKDAIEYVKKKGIYVTL---------VTNRHFRSAQKIAKSLKLDAKLITHSGAY 73 (290)
T ss_dssp --CCEEEECCCCCCSCTTSC-CCHHHHHHHHHHHHTTCEEEE---------BCSSCHHHHHHHHHHTTCCSCEEEGGGTE
T ss_pred CcceEEEEcCCCCCCCCCCc-cCHHHHHHHHHHHHCCCEEEE---------ECCCChHHHHHHHHHcCCCCeEEEcCCeE
Confidence 56899999999999998875 444556665544 433211 2455555555555444432
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHHH------------------HHHHHHh-------cCCCCChhHHHHHHH
Q 020874 142 ---------EKAPSDEEERKQFIASLHKRKTEL------------------FMVLIEK-------KLLPLRPGVAKLIDQ 187 (320)
Q Consensus 142 ---------~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-------~~~~~~pg~~e~l~~ 187 (320)
.......+...++++.+.+..... +...... ....+++++.++++.
T Consensus 74 i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (290)
T 3dnp_A 74 IAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMD 153 (290)
T ss_dssp EESSTTSCSEECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHH
T ss_pred EEcCCCCEEEecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhc
Confidence 001223444444444332210000 0000000 001234566677766
Q ss_pred HHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEE-eC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 020874 188 ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF-AG----DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI 262 (320)
Q Consensus 188 L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~-~~----d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~ 262 (320)
+.....++.+ +.... .....++.+ ...++...++ ++ +..+.+.+|+.+++.+++++|++++++++|||+.|
T Consensus 154 ~~~~~~ki~~-~~~~~-~~~~~~~~l--~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~N 229 (290)
T 3dnp_A 154 EPVSAPVIEV-YTEHD-IQHDITETI--TKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYD 229 (290)
T ss_dssp SCCCCSEEEE-ECCGG-GHHHHHHHH--HHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred CCCCceEEEE-eCCHH-HHHHHHHHH--HhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchh
Confidence 6666677754 33332 334444443 1111111222 22 33467888999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhh
Q 020874 263 GLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAF 309 (320)
Q Consensus 263 Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~ 309 (320)
|++|++.+|+..++ ++..++.++.|++++.+.+| +.+.|.+++.
T Consensus 230 Di~m~~~ag~~vam---~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~ 275 (290)
T 3dnp_A 230 DLPMIELAGLGVAM---GNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR 275 (290)
T ss_dssp GHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred hHHHHHhcCCEEEe---cCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence 99999999976665 77887778889999999988 7888877774
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=140.68 Aligned_cols=202 Identities=16% Similarity=0.073 Sum_probs=124.7
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHc---CCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK 152 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (320)
|+|+|+||+||||+++... +.....++++++ |+.... ..|++......++...++....-.....
T Consensus 2 m~kli~~DlDGTLl~~~~~-i~~~~~~al~~l~~~G~~v~i---------~TGR~~~~~~~~~~~l~~~~~~i~~nGa-- 69 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRM-IHEKALEAIRRAESLGIPIML---------VTGNTVQFAEAASILIGTSGPVVAEDGG-- 69 (231)
T ss_dssp CCCEEEEESTTTTBCTTSC-BCHHHHHHHHHHHHTTCCEEE---------ECSSCHHHHHHHHHHHTCCSCEEEGGGT--
T ss_pred ceeEEEEECCCCCCCCCCc-CCHHHHHHHHHHHHCCCEEEE---------EcCCChhHHHHHHHHcCCCCeEEEeCCc--
Confidence 5799999999999998775 434455555443 544321 2455555555555444432100000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHH-Hc-CCeE-----------EEEc-CCchHHHHHHHHHhcCccc
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL-EK-GVKV-----------AVCS-TSNEKAVTAIVSFLLGPER 218 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~-~~-G~~i-----------~lvT-~~~~~~~~~~l~~~~~~~~ 218 (320)
.... .. + .+ ....+ +.+.++++.++ +. |+.+ .+++ +.....+...++.++ ..
T Consensus 70 ~i~~--~~---~----~~--~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 135 (231)
T 1wr8_A 70 AISY--KK---K----RI--FLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LN 135 (231)
T ss_dssp EEEE--TT---E----EE--ESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CS
T ss_pred EEEe--CC---E----EE--EeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--Cc
Confidence 0000 00 0 00 00122 66666666666 44 4433 5666 556667777777753 33
Q ss_pred ccceeEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec
Q 020874 219 AEKIQIFAG----DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF 294 (320)
Q Consensus 219 ~~~~~i~~~----d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi 294 (320)
++ ++++ +.++.++||+..++.+++++|++++++++|||+.||+.+++.+|+.++ + ++...+..+.|++++
T Consensus 136 ~~---~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~-~--~~~~~~~~~~a~~v~ 209 (231)
T 1wr8_A 136 LV---AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA-V--AQAPKILKENADYVT 209 (231)
T ss_dssp CE---EEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE-C--TTSCHHHHTTCSEEC
T ss_pred EE---EEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-e--cCCCHHHHhhCCEEe
Confidence 43 3333 334678999999999999999999999999999999999999998843 3 444555556899999
Q ss_pred cCCCC--ChhhHHhhhh
Q 020874 295 DCIGD--PPEERFDLAF 309 (320)
Q Consensus 295 ~~l~e--l~~~l~~~~~ 309 (320)
++.+| +.+.|.++++
T Consensus 210 ~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 210 KKEYGEGGAEAIYHILE 226 (231)
T ss_dssp SSCHHHHHHHHHHHHHH
T ss_pred cCCCcchHHHHHHHHHH
Confidence 98876 6666666654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=144.20 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=66.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHH
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERF 305 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~ 305 (320)
+..+.+++|+.+++.+++++|++++++++|||+.||++|++.+|+..++ ++..++.++.|++++++.+| +...|.
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM---GNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc---CCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 3456788999999999999999999999999999999999999955544 88888888889999988776 566666
Q ss_pred hhhh
Q 020874 306 DLAF 309 (320)
Q Consensus 306 ~~~~ 309 (320)
+++.
T Consensus 267 ~~~~ 270 (279)
T 4dw8_A 267 RIFN 270 (279)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 6664
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=136.47 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=77.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC---ch--HHHHHHHHHh-cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS---NE--KAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLG 248 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~---~~--~~~~~~l~~~-~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g 248 (320)
.+++||+.++|+.|++. ++++|+||. .. ......+..+ +...+++ .++++++. .+
T Consensus 68 ~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~--~i~~~~~~---------------~l- 128 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQH--FVFCGRKN---------------II- 128 (180)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGG--EEECSCGG---------------GB-
T ss_pred CCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCccc--EEEeCCcC---------------ee-
Confidence 68899999999999985 999999998 32 2234455554 4444555 67777652 11
Q ss_pred CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 249 VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 249 ~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
++++||||+.+|+. .++| .+|++.++++.. ..++++++++.|+...+.+
T Consensus 129 ---~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~l~~ 177 (180)
T 3bwv_A 129 ---LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNYFNS 177 (180)
T ss_dssp ---CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHHHHH
T ss_pred ---cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHHHHH
Confidence 67899999999985 5689 999998765432 4688999999988776654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.7e-18 Score=149.04 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=125.9
Q ss_pred CCceEEEEeCCCccccCCc-cchHHHHHHHHHHc---CCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCC---------
Q 020874 75 VLPSALLFDCDGVLVDTEK-DGHRISFNDTFKEK---ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP--------- 141 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~-~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------- 141 (320)
+++|+|+|||||||+++.. . +.....++++++ |+... ...|++...+..++...+..
T Consensus 19 ~~~kli~~DlDGTLl~~~~~~-i~~~~~~al~~l~~~G~~v~---------iaTGR~~~~~~~~~~~l~~~~~~I~~NGa 88 (283)
T 3dao_A 19 GMIKLIATDIDGTLVKDGSLL-IDPEYMSVIDRLIDKGIIFV---------VCSGRQFSSEFKLFAPIKHKLLYITDGGT 88 (283)
T ss_dssp CCCCEEEECCBTTTBSTTCSC-CCHHHHHHHHHHHHTTCEEE---------EECSSCHHHHHHHTGGGGGGCEEEETTTT
T ss_pred cCceEEEEeCcCCCCCCCCCc-CCHHHHHHHHHHHHCCCEEE---------EEcCCCHHHHHHHHHHcCCCcEEEECCCc
Confidence 6789999999999999876 4 334455555543 33321 11455555555554433221
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHH--H----------------HHHHHHHHHhcCCCCChhHHHHHHHHH-HcCC
Q 020874 142 ---------EKAPSDEEERKQFIASLHKR--K----------------TELFMVLIEKKLLPLRPGVAKLIDQAL-EKGV 193 (320)
Q Consensus 142 ---------~~~~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~pg~~e~l~~L~-~~G~ 193 (320)
.......+...++++.+.+. . ...+.+.+... ........+-+..+. +..+
T Consensus 89 ~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~ 167 (283)
T 3dao_A 89 VVRTPKEILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDS-YGFEMREVDDITRLDRNDII 167 (283)
T ss_dssp EEECSSCEEEECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHT-SCCCEEECSCGGGCCCSCCC
T ss_pred EEEECCEEEEEecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHh-hcCCceEcCCHHHcCccCce
Confidence 01123455555555544432 0 00011111110 111111112222243 5578
Q ss_pred eEEEEc-CCch-HHHHHHHHHhcCcccccceeEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 020874 194 KVAVCS-TSNE-KAVTAIVSFLLGPERAEKIQIFAGD----VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAA 267 (320)
Q Consensus 194 ~i~lvT-~~~~-~~~~~~l~~~~~~~~~~~~~i~~~d----~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A 267 (320)
++.++. .... .....+.+.++ ..+. .+.++. ..+.+.+|+.+++.+++++|++++++++|||+.||++|+
T Consensus 168 ki~i~~~~~~~~~~~~~l~~~~~--~~~~--~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml 243 (283)
T 3dao_A 168 KFTVFHPDKCEELCTPVFIPAWN--KKAH--LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEML 243 (283)
T ss_dssp EEEEECSSCHHHHHTTTHHHHHT--TTEE--EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred EEEEEcChHHHHHHHHHHHHHhc--CCEE--EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 888883 2222 22233334432 2222 333332 245677899999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 268 KAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 268 ~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
+.+|+..++ ++..++.++.|++++++.+| +...|.++
T Consensus 244 ~~ag~~vam---~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 244 QNAGISYAV---SNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHSSEEEEE---TTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HhCCCEEEc---CCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 999977666 78888888889999988877 55555443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-17 Score=145.50 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=78.5
Q ss_pred eEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 020874 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD------VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAA 267 (320)
Q Consensus 194 ~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d------~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A 267 (320)
++.+. ........+.+.+.. .+. .+.++. ..+.+++|+..++++++++|++++++++|||+.||++|+
T Consensus 159 ki~~~--~~~~~~~~~~~~l~~--~~~--~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~ 232 (274)
T 3fzq_A 159 KICLW--SNEKVFDEVKDILQD--KME--LAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMF 232 (274)
T ss_dssp EEEEE--CCHHHHHHHHHHHGG--GEE--EEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHH
T ss_pred EEEEE--cCHHHHHHHHHHhhc--ceE--EEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHH
Confidence 44444 455556666666632 232 333332 456889999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 268 KAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 268 ~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
+.+|+..+| ++..++.++.|++++++.+| +...|.++
T Consensus 233 ~~ag~~vam---~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 233 QASDVTIAM---KNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HTCSEEEEE---TTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HhcCceEEe---cCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 999966555 88888888889999998876 44444443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-17 Score=146.62 Aligned_cols=77 Identities=5% Similarity=-0.082 Sum_probs=66.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
.+.+.+|+..++.+++++|++++++++|||+.||++|++.+|+..++ ++..++.++.|++++++.+| +...|.++
T Consensus 223 ~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 299 (304)
T 3l7y_A 223 ITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM---ANAPKNVKAAANYQAKSNDESGVLDVIDNY 299 (304)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC---TTSCHHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc---CCcCHHHHHhccEEcCCCCcchHHHHHHHH
Confidence 35677889999999999999999999999999999999999966555 88888888889999999888 77777776
Q ss_pred hh
Q 020874 308 AF 309 (320)
Q Consensus 308 ~~ 309 (320)
+.
T Consensus 300 ~~ 301 (304)
T 3l7y_A 300 LA 301 (304)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-17 Score=144.25 Aligned_cols=78 Identities=17% Similarity=0.120 Sum_probs=53.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLA 308 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~ 308 (320)
+.+..|+.+++.+++++|++++++++|||+.||++|++.+|+.. ..++..++.++.|++++.+.+| +...|.+++
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~v---am~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~ 269 (279)
T 3mpo_A 193 NRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGV---AMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYA 269 (279)
T ss_dssp ESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEEC---BC---CCHHHHHCSCBC------CHHHHHC---
T ss_pred cCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCcee---eccCCCHHHHHhcceeccCCCccHHHHHHHHHh
Confidence 45566899999999999999999999999999999999999554 4488888888889999988776 667777766
Q ss_pred hcc
Q 020874 309 FCG 311 (320)
Q Consensus 309 ~~~ 311 (320)
+++
T Consensus 270 ~~~ 272 (279)
T 3mpo_A 270 LNE 272 (279)
T ss_dssp ---
T ss_pred ccc
Confidence 554
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=128.79 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=85.8
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHH--hcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSF--LLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST 261 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~--~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~ 261 (320)
.|+.|+++|++++|+||. ..+...++. ++.. ++.+ .+++++.++.+++++|+++++++||||+.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-------~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~ 109 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-------TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEV 109 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCH
Confidence 689999999999999998 567778884 3322 2221 36789999999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhh
Q 020874 262 IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAF 309 (320)
Q Consensus 262 ~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~ 309 (320)
||+.+++.+|+.+++ ++..+...+.|++++.+-.+ ...++.+.++
T Consensus 110 nDi~~~~~ag~~~a~---~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 110 SDEECLKRVGLSAVP---ADACSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp GGHHHHHHSSEEEEC---TTCCHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred hHHHHHHHCCCEEEe---CChhHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 999999999988765 55566666889999987655 2444444443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.66 E-value=4.9e-17 Score=141.62 Aligned_cols=115 Identities=12% Similarity=0.001 Sum_probs=83.8
Q ss_pred HHHcCCeEEEEcCCchHHHHHHHHHhc--CcccccceeEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 020874 188 ALEKGVKVAVCSTSNEKAVTAIVSFLL--GPERAEKIQIFAG----DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST 261 (320)
Q Consensus 188 L~~~G~~i~lvT~~~~~~~~~~l~~~~--~~~~~~~~~i~~~----d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~ 261 (320)
+++.++++.++++... ....++.+. ....+. .+.++ +..+.+++|+..++.+++++|++++++++|||+.
T Consensus 142 ~~~~~~ki~i~~~~~~--~~~~~~~l~~~~~~~~~--~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ--IPLVIDKLHVALDGIMK--PVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSG 217 (271)
T ss_dssp CCSCEEEEEEECCGGG--HHHHHHHHHHHTTTSSE--EEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred CCCceEEEEEEcCHHH--HHHHHHHHHHHcCCcEE--EEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 3445778888886533 444444442 223343 34444 3456889999999999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhh
Q 020874 262 IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAF 309 (320)
Q Consensus 262 ~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~ 309 (320)
||+.|++.+|+..++ ++...+....|++++.+.+| +.+.|.+++.
T Consensus 218 nD~~m~~~ag~~va~---~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 218 NDAEMLKMARYSFAM---GNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp GGHHHHHHCSEEEEC---TTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEe---CCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 999999999986543 56665556779999988876 6666666654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-17 Score=144.54 Aligned_cols=76 Identities=11% Similarity=0.073 Sum_probs=65.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
++.++||+..++.+++++|++++++++|||+.||+.|++.+|+.+++ ++........|++++++..| +.+.|.++
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 56789999999999999999999999999999999999999986554 56655555679999999998 88777655
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
.
T Consensus 259 ~ 259 (261)
T 2rbk_A 259 G 259 (261)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.60 E-value=6.1e-15 Score=127.24 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=61.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLA 308 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~ 308 (320)
+.+-.|..+++.+++++|++++++++|||+.||++|++.+|+..++ ++..++.++.|++++++.+| +.+.|.+++
T Consensus 179 ~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 179 PAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp ESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred ECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 4556678999999999999999999999999999999999998776 66666667789999988776 455454443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-15 Score=125.50 Aligned_cols=74 Identities=11% Similarity=-0.026 Sum_probs=59.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
+.+.+|+..++.+++++|++++++++|||+.||+.|++.+|+..++ ++......+.|++++.+.++ +.+.+.++
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~---~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~ 224 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP---ANATDNIKAVSDFVSDYSYGEEIGQIFKHF 224 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC---TTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe---cCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence 4567889999999999999999999999999999999999986443 55555555679999988766 44544443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.3e-15 Score=127.48 Aligned_cols=99 Identities=13% Similarity=0.115 Sum_probs=74.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---hHHHHHHHHHhcCc--ccccceeEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV 249 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---~~~~~~~l~~~~~~--~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~ 249 (320)
.+++||+.++|+.|+++|++++++||.+ ...+...|+.+++. .+++ .++++++. .||.+ ...++ ..+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~--vi~~~~~~--~K~~~--~~~~~-~~~~ 172 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEH--ILLQDPKE--KGKEK--RRELV-SQTH 172 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTT--EEEECTTC--CSSHH--HHHHH-HHHE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCce--EEECCCCC--CCcHH--HHHHH-HhCC
Confidence 6789999999999999999999999988 55677788888776 4554 55665543 45554 33332 3333
Q ss_pred CCCcEEEEecCHhhHHHHH-------H---------cCCeEEEEcCCCC
Q 020874 250 DPSSCVVVEDSTIGLAAAK-------A---------AGMKCIVTKSSYT 282 (320)
Q Consensus 250 ~~~~~v~VGDs~~Di~~A~-------~---------aG~~~v~v~~g~~ 282 (320)
..++||||+.+|+.+|. + +|+.+|.+.++..
T Consensus 173 --~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y 219 (258)
T 2i33_A 173 --DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMY 219 (258)
T ss_dssp --EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSS
T ss_pred --CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCc
Confidence 34899999999999993 4 8999999987643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-15 Score=133.36 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=76.8
Q ss_pred HcCCeEEEEcCCchHHHHHHHHHhc--CcccccceeEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 190 EKGVKVAVCSTSNEKAVTAIVSFLL--GPERAEKIQIFAG----DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 190 ~~G~~i~lvT~~~~~~~~~~l~~~~--~~~~~~~~~i~~~----d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
..++...++++.+........+.+. ....+. .++++ +..+.+.+|+.+++++++++|++++++++|||+.||
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~ND 237 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQAMNARWGDRVN--VSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMND 237 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEE--EEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEE--EEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhh
Confidence 3455555666555444444444331 111121 22332 234567788999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCe--eccCCCC--ChhhHHhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADA--VFDCIGD--PPEERFDLA 308 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~--vi~~l~e--l~~~l~~~~ 308 (320)
++|++.+|+..++ ++..++.++.|++ ++.+.+| +...|.+++
T Consensus 238 i~ml~~ag~~vAm---~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 238 AEMLSMAGKGCIM---ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHHHSSEEEEC---TTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHHhcCCEEEc---cCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9999999966555 8888888877874 6666655 455555544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-15 Score=129.67 Aligned_cols=76 Identities=20% Similarity=0.116 Sum_probs=64.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFD 306 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~ 306 (320)
..+.+.+|+..++.+++++|++++++++|||+.||++|++.+|+..++ ++..++.++.|++++++.+| +...|.+
T Consensus 188 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 188 VNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM---GNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 345678889999999999999999999999999999999999966655 88888888889999998877 4555544
Q ss_pred h
Q 020874 307 L 307 (320)
Q Consensus 307 ~ 307 (320)
+
T Consensus 265 ~ 265 (268)
T 3r4c_A 265 F 265 (268)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=126.75 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=85.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHH--------hcCcccccceeEEeCCCCCCCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSF--------LLGPERAEKIQIFAGDVVPRKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~--------~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~ 243 (320)
..+|||+.++|+.|+++|++++++||.+... +...|+. +++ .|+ .++++++. ..||+|+++..+
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~~~~~~~-~~kp~p~~~~~~ 261 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLV--MQCQREQG-DTRKDDVVKEEI 261 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCS--EEEECCTT-CCSCHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cch--heeeccCC-CCcHHHHHHHHH
Confidence 3569999999999999999999999987543 3556666 655 465 67766654 579999999999
Q ss_pred HHHcCCCCCc-EEEEecCHhhHHHHHHcCCeEEEEcCC
Q 020874 244 ASTLGVDPSS-CVVVEDSTIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 244 ~~~~g~~~~~-~v~VGDs~~Di~~A~~aG~~~v~v~~g 280 (320)
+++++..+.+ ++||||+..|+++|+++|+.+|+|.||
T Consensus 262 ~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 262 FWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 9999887655 699999999999999999999999998
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.45 E-value=5.9e-13 Score=116.74 Aligned_cols=65 Identities=23% Similarity=0.127 Sum_probs=53.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
.+-.|+..++.+++++|++++++++|||+.||+.|++.+|+. |.+ ++...+....|++++++..+
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~--~~~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAM--GNAREDIKSIADAVTLTNDE 277 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EEC--TTCCHHHHHHCSEECCCGGG
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEE--cCCCHHHHhhCceeecCCCc
Confidence 455678899999999999999999999999999999999984 444 44555555669999987765
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=113.95 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=61.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFD 306 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~ 306 (320)
..+.+.+|+..++.+++++|++++++++|||+.||+.|++.+|+..++ ++...+....|++++++.++ +.+.|.+
T Consensus 184 i~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~dGv~~~i~~ 260 (268)
T 1nf2_A 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNNDSGVSYVLER 260 (268)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred EeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe---cCCCHHHHhhCCEEEccCCcchHHHHHHH
Confidence 345677889999999999999999999999999999999999985443 66655555679999988766 5555555
Q ss_pred hh
Q 020874 307 LA 308 (320)
Q Consensus 307 ~~ 308 (320)
++
T Consensus 261 ~~ 262 (268)
T 1nf2_A 261 IS 262 (268)
T ss_dssp BC
T ss_pred HH
Confidence 44
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.4e-14 Score=125.83 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=63.6
Q ss_pred CCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCC
Q 020874 231 PRKKPDPAIYTLAASTL----------------------GV-----DPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~----------------------g~-----~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~ 282 (320)
..+||.+.+|+.+++.+ |+ ++++++||||+. +|+.+|+++|+.+|+|.+|..
T Consensus 243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~ 322 (352)
T 3kc2_A 243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY 322 (352)
T ss_dssp ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence 47899999999887654 22 569999999999 699999999999999999876
Q ss_pred Cccc---ccCCCeeccCCCCChhhHHhh
Q 020874 283 AEED---FLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 283 ~~~~---~~~a~~vi~~l~el~~~l~~~ 307 (320)
..+. ...++++++++.|+.+.+++.
T Consensus 323 ~~~~~~~~~~pd~vi~~l~el~~~il~~ 350 (352)
T 3kc2_A 323 NEGDDLKECKPTLIVNDVFDAVTKTLEK 350 (352)
T ss_dssp CTTCCCTTCCCSEECSSHHHHHHHHHHH
T ss_pred CcccccccCCCCEEECCHHHHHHHHHHh
Confidence 6543 246999999999988877653
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.41 E-value=5.7e-14 Score=125.83 Aligned_cols=126 Identities=19% Similarity=0.054 Sum_probs=81.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC----CCC----------------CCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG----DVV----------------PRKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~----d~~----------------~~~K 234 (320)
..+++++.++|+.|++ |+.++++|+.....+....+.++. ++ .+... +.. ...+
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 175 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV---RG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASL 175 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC---CS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh---hh--hhcccccchhhhccccccceeEEecCHHHHhh
Confidence 3668999999999999 999999998876666666666533 12 12111 000 0001
Q ss_pred CC---------------HHHHH----------HHHHHcCCCCCc----EEEEecCHhhHHHHHHc----CCeEEEEcCCC
Q 020874 235 PD---------------PAIYT----------LAASTLGVDPSS----CVVVEDSTIGLAAAKAA----GMKCIVTKSSY 281 (320)
Q Consensus 235 P~---------------~~~~~----------~~~~~~g~~~~~----~v~VGDs~~Di~~A~~a----G~~~v~v~~g~ 281 (320)
++ |..|. +.....|+++++ +++|||+.||+.|++.+ |+..++ +
T Consensus 176 ~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-n--- 251 (332)
T 1y8a_A 176 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-N--- 251 (332)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-S---
T ss_pred hhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-c---
Confidence 11 11122 111112677888 99999999999999999 987665 2
Q ss_pred CCcccccCCCeeccCCCC--ChhhHHhhhhc
Q 020874 282 TAEEDFLNADAVFDCIGD--PPEERFDLAFC 310 (320)
Q Consensus 282 ~~~~~~~~a~~vi~~l~e--l~~~l~~~~~~ 310 (320)
..+..++.|++++.+.++ +...|.++++.
T Consensus 252 a~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~ 282 (332)
T 1y8a_A 252 GNEYALKHADVVIISPTAMSEAKVIELFMER 282 (332)
T ss_dssp CCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred CCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence 344555789999987554 66666666643
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.41 E-value=8.2e-13 Score=115.51 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=62.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
.+.+-+|+..++.+++++|++++++++|||+.||+.|++.+|+..+ .++......+.|++++++..+ +.+.|.++
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va---~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~ 269 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA---VDNAIPSVKEVANFVTKSNLEDGVAFAIEKY 269 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE---CTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE---ecCCcHHHHhhCCEEecCCCcchHHHHHHHH
Confidence 4566788999999999999999999999999999999999997433 355555555679999988777 67777666
Q ss_pred hh
Q 020874 308 AF 309 (320)
Q Consensus 308 ~~ 309 (320)
++
T Consensus 270 ~~ 271 (282)
T 1rkq_A 270 VL 271 (282)
T ss_dssp TT
T ss_pred Hh
Confidence 53
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=112.35 Aligned_cols=75 Identities=9% Similarity=-0.010 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc-CCCC--ChhhHHhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD-CIGD--PPEERFDL 307 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~-~l~e--l~~~l~~~ 307 (320)
+.+-+|+..++.+++.+|++++++++|||+.||+.|++.+|+..++ ++........|+++++ +..+ +.+.|.++
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~---~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~ 296 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV---ANATDSAKSHAKCVLPVSHREGAVAYLLKKV 296 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC---TTCCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE---cCCcHHHHhhCCEEEccCCCCcHHHHHHHHH
Confidence 4667889999999999999999999999999999999999986443 5555555567999998 7765 55656555
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 297 ~ 297 (301)
T 2b30_A 297 F 297 (301)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-12 Score=112.12 Aligned_cols=73 Identities=10% Similarity=-0.120 Sum_probs=56.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhH
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDP--SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEER 304 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~--~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l 304 (320)
..+. ++|+..++++++++|+++ +++++|||+.||+.|++.+|+..++ ++... + .++++..+-.+ +.+.+
T Consensus 171 i~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~---~na~~--~-~~~~~~~~~~~~gv~~~~ 243 (259)
T 3zx4_A 171 AAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV---GRGDP--P-EGVLATPAPGPEGFRYAV 243 (259)
T ss_dssp EESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC---SSSCC--C-TTCEECSSCHHHHHHHHH
T ss_pred EcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe---CChhh--c-CCcEEeCCCCchHHHHHH
Confidence 3455 889999999999999999 9999999999999999999987665 55544 3 66777665443 44444
Q ss_pred Hhhh
Q 020874 305 FDLA 308 (320)
Q Consensus 305 ~~~~ 308 (320)
..++
T Consensus 244 ~~~~ 247 (259)
T 3zx4_A 244 ERYL 247 (259)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4444
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.2e-12 Score=108.40 Aligned_cols=85 Identities=14% Similarity=0.087 Sum_probs=63.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch----HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~----~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
.+++||+.++|+.|++.|++++++||.+. ..+...|+.+|+..+++..-++..+ ...+...+..+.+. |..
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~l~~~-Gy~ 174 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD----KSAKAARFAEIEKQ-GYE 174 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS----CSCCHHHHHHHHHT-TEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC----CCChHHHHHHHHhc-CCC
Confidence 68899999999999999999999999865 5888899999876655321333322 23445566665554 433
Q ss_pred CCcEEEEecCHhhHHH
Q 020874 251 PSSCVVVEDSTIGLAA 266 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~ 266 (320)
.+++|||+.+|+.+
T Consensus 175 --iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 175 --IVLYVGDNLDDFGN 188 (262)
T ss_dssp --EEEEEESSGGGGCS
T ss_pred --EEEEECCChHHhcc
Confidence 38999999999998
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.24 E-value=8.8e-12 Score=106.33 Aligned_cols=85 Identities=12% Similarity=0.120 Sum_probs=61.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch----HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~----~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
.+++||+.++|+.|++.|++++++||.+. ..+...|+.+|+..+++..-++..+. ..+...+.. +++.|.
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~----~~K~~~r~~-L~~~gy- 173 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK----SNKSVRFKQ-VEDMGY- 173 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC----SSSHHHHHH-HHTTTC-
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC----CChHHHHHH-HHhcCC-
Confidence 68899999999999999999999999865 48888999997766553213333321 223444444 444454
Q ss_pred CCcEEEEecCHhhHHH
Q 020874 251 PSSCVVVEDSTIGLAA 266 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~ 266 (320)
.-+++|||+.+|+.+
T Consensus 174 -~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 174 -DIVLFVGDNLNDFGD 188 (260)
T ss_dssp -EEEEEEESSGGGGCG
T ss_pred -CEEEEECCChHHcCc
Confidence 348999999999998
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-10 Score=102.70 Aligned_cols=137 Identities=13% Similarity=0.080 Sum_probs=84.2
Q ss_pred HHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC-----CC---------C--CCC
Q 020874 170 IEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-----DV---------V--PRK 233 (320)
Q Consensus 170 ~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~-----d~---------~--~~~ 233 (320)
+.....++.||+.++++.|+++|++++++|++....++.++++++...... .+++. ++ . ...
T Consensus 135 v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~--~i~~n~l~~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 135 VADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVVSNFMDFDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp HHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE--EEEEECEEECTTSBEEEECSSCCCTTC
T ss_pred HHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc--eEEeeeEEEcccceeEeccccccchhh
Confidence 334457899999999999999999999999999999999999986543211 22221 11 0 122
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCC--CCc-----ccccCCCeeccC--CCCChhhH
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY--TAE-----EDFLNADAVFDC--IGDPPEER 304 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~--~~~-----~~~~~a~~vi~~--l~el~~~l 304 (320)
|+.+..-......+.-...+++||||+.||+.|++.+...-+++.-|. ... ...+.+|.|+-+ +-+++..+
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 222222112222333455789999999999999885543333333332 111 113568877543 44555555
Q ss_pred Hhhh
Q 020874 305 FDLA 308 (320)
Q Consensus 305 ~~~~ 308 (320)
++.+
T Consensus 293 l~~i 296 (297)
T 4fe3_A 293 LQKT 296 (297)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 5543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-11 Score=103.48 Aligned_cols=66 Identities=9% Similarity=-0.109 Sum_probs=52.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC-cccccCCCeeccCCC
Q 020874 229 VVPRKKPDPAIYTLAASTLGV-DPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA-EEDFLNADAVFDCIG 298 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~-~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~-~~~~~~a~~vi~~l~ 298 (320)
..+ +-.|...++.+++.+|+ .++++++|||+.||+.|++.+|+..++ ++.. .+..+.|++++++..
T Consensus 174 i~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~---gna~~~~~~~~a~~v~~~~~ 241 (249)
T 2zos_A 174 VHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV---GSLKHKKAQNVSSIIDVLEV 241 (249)
T ss_dssp EEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE---SSCCCTTEEEESSHHHHHHH
T ss_pred EeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe---CCCCccccchhceEEecccc
Confidence 345 67789999999999998 999999999999999999999986554 6655 334456888776543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=9e-12 Score=102.56 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=85.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
+.++||+.++|+.|++. ++++|+|++...+++.+++.++...+|+ .+++++++...| ..|.+.++++|.++++|
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~--~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~ 140 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFR--ARLFRESCVFHR---GNYVKDLSRLGRELSKV 140 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEE--EEECGGGCEEET---TEEECCGGGSSSCGGGE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEE--EEEEcccceecC---CceeeeHhHhCCChhHE
Confidence 46789999999999998 9999999999999999999998888887 778888766555 56778899999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEE
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIV 276 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~ 276 (320)
|+|||+..++.++.++|+.++.
T Consensus 141 vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 141 IIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp EEEESCGGGGTTCGGGEEECCC
T ss_pred EEEECCHHHhhhCccCccEEee
Confidence 9999999999999999988654
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.4e-10 Score=99.10 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccC-------CCeeccCCCC--C
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLN-------ADAVFDCIGD--P 300 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~-------a~~vi~~l~e--l 300 (320)
.+.+-+|+..++++++++|++++++++|||+.||+.|++.+|+..++ ++...+..+. +++++++..+ +
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~---~na~~~~k~~a~~~~~~a~~v~~~~~~dGv 233 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV---RNAQPELLHWYDQWGDSRHYRAQSSHAGAI 233 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC---TTCCHHHHHHHHHHCCTTEEECSSCHHHHH
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE---cCCcHHHHHHHhcccccceeecCCcchhHH
Confidence 45677889999999999999999999999999999999999975444 5555554443 7888887655 4
Q ss_pred hhhHHhh
Q 020874 301 PEERFDL 307 (320)
Q Consensus 301 ~~~l~~~ 307 (320)
.+.|.++
T Consensus 234 a~~i~~~ 240 (244)
T 1s2o_A 234 LEAIAHF 240 (244)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 4444443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.96 E-value=5.6e-11 Score=96.75 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=82.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|.+. ++++|+|++...+++.+++.++...+|. .+++.+++...| ..|.+.++++|.++++|
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~--~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~ 127 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR--ARLFRESCVFHR---GNYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEE--EEECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEE--EEEeccCceecC---CcEeccHHHhCCCcceE
Confidence 46789999999999998 9999999999999999999998877777 677777665443 45677889999999999
Q ss_pred EEEecCHhhHHHHHHcCCeE
Q 020874 255 VVVEDSTIGLAAAKAAGMKC 274 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~ 274 (320)
|+|||+..++.++.++|+..
T Consensus 128 vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 128 LILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECSCGGGGTTCTTSBCCC
T ss_pred EEEeCCHHHhccCcCCEeEe
Confidence 99999999999999999984
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.92 E-value=3.3e-09 Score=92.13 Aligned_cols=78 Identities=8% Similarity=-0.073 Sum_probs=43.4
Q ss_pred CCCCCCCHHHHHHHHHHcC-CCCCc--EEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-c--CCC-eeccCCCC--C
Q 020874 230 VPRKKPDPAIYTLAASTLG-VDPSS--CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-L--NAD-AVFDCIGD--P 300 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g-~~~~~--~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~--~a~-~vi~~l~e--l 300 (320)
.+.+.+|+..++.+++.+| +++++ +++|||+.||+.|++.+|+. |.+.++....+.+ . .|+ +++++.++ +
T Consensus 184 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGV 262 (275)
T 1xvi_A 184 LDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGW 262 (275)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC-------------------------
T ss_pred ecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHH
Confidence 3567788999999999999 99999 99999999999999999985 4444433222333 2 367 78776554 5
Q ss_pred hhhHHhhh
Q 020874 301 PEERFDLA 308 (320)
Q Consensus 301 ~~~l~~~~ 308 (320)
.+.|.+++
T Consensus 263 a~~l~~~l 270 (275)
T 1xvi_A 263 REGLDHFF 270 (275)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 55555554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.87 E-value=9.7e-09 Score=93.21 Aligned_cols=95 Identities=13% Similarity=0.035 Sum_probs=64.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe------------CCCC-----CCCCCCHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA------------GDVV-----PRKKPDPA 238 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~------------~d~~-----~~~KP~~~ 238 (320)
+++||+.++++.|+++|++++|||++....++.+.+.++.........+++ +... ..+.-|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~ 300 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ 300 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence 379999999999999999999999999999999999885432111112221 1110 11112444
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 020874 239 IYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271 (320)
Q Consensus 239 ~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG 271 (320)
.++.+++. ......++++|||.+|+.|.+..+
T Consensus 301 ~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 301 TINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 45444322 234456899999999999999854
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.87 E-value=9.6e-09 Score=99.51 Aligned_cols=113 Identities=15% Similarity=0.098 Sum_probs=87.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.|++.+.++.|+++|++++++|+.+...+..+.++++...++. +.. ++.|.+.++.+ +.. ++++
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~-------~~~--P~~K~~~v~~l----~~~-~~v~ 522 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA-------EVL--PHQKSEEVKKL----QAK-EVVA 522 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC-------SCC--TTCHHHHHHHH----TTT-CCEE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE-------eCC--HHhHHHHHHHH----hhC-CeEE
Confidence 578999999999999999999999999999999999997653332 222 23445555444 333 7899
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhHH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEERF 305 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l~ 305 (320)
||||+.||+.|.+.+|+. +..|+..+...+.||+++ +++.++.+.+.
T Consensus 523 ~vGDg~ND~~al~~A~vg---iamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 523 FVGDGINDAPALAQADLG---IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp EEECSSSCHHHHHHSSEE---EEECCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred EEeCCHhHHHHHHhCCEE---EEeCCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999944 444777777778899998 66666666543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.76 E-value=4.9e-08 Score=95.83 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.|++.+.++.|+++|++++++|+.+...+..+.+.+|....+ .+..+ ..|.+.++.+ +-. ++++
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~-------~~~~P--~~K~~~v~~l----~~~-~~v~ 600 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI-------AEVLP--HQKSEEVKKL----QAK-EVVA 600 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE-------CSCCT--TCHHHHHHHH----TTT-CCEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEE-------ccCCH--HHHHHHHHHH----hcC-CeEE
Confidence 58899999999999999999999999999999999999764322 22222 3344444444 333 7899
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhHH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEERF 305 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l~ 305 (320)
||||+.||+.|.+.|| +++..|+..+...+.||+++ +++..+...+.
T Consensus 601 ~vGDg~ND~~al~~A~---vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 601 FVGDGINDAPALAQAD---LGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp EEECSSTTHHHHHHSS---EEEECCCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred EEECChhhHHHHhhCC---EEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 9999999999999999 45555777777778899998 66666665543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-07 Score=88.35 Aligned_cols=99 Identities=17% Similarity=0.170 Sum_probs=79.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh-cC-------------cccccceeEEeCCCCCCCCCCHHH-
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LG-------------PERAEKIQIFAGDVVPRKKPDPAI- 239 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~-~~-------------~~~~~~~~i~~~d~~~~~KP~~~~- 239 (320)
+..-|++.++|+.|++.| ++.|+||++...++...+.+ +. .++|| .++.. ..||....
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD--~vI~~----A~KP~FF~~ 317 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFD--LILVD----ARKPLFFGE 317 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCS--EEEES----CCTTGGGTT
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCC--EEEEe----CCCCCcccC
Confidence 455689999999999999 99999999999999999998 41 24566 43322 12332111
Q ss_pred ---------------------------------HHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEcCC
Q 020874 240 ---------------------------------YTLAASTLGVDPSSCVVVEDST-IGLAAAK-AAGMKCIVTKSS 280 (320)
Q Consensus 240 ---------------------------------~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~-~aG~~~v~v~~g 280 (320)
+..+++.+|+...+++||||.. .||..++ .+|+.+++|...
T Consensus 318 ~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 318 GTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp CCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred CCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 4888999999999999999999 8999997 899999998754
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=7.7e-08 Score=94.21 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=85.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.|++.+.++.|+++|++++++|+.+...+..+.+++++..++. +. .|+--..++++++-..+.++
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a-------~~------~P~~K~~~v~~l~~~g~~V~ 620 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVA-------EI------MPEDKSRIVSELKDKGLIVA 620 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEEC-------SC------CHHHHHHHHHHHHHHSCCEE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEE-------ec------CHHHHHHHHHHHHhcCCEEE
Confidence 578999999999999999999999999999999999997653322 11 12223334444443567799
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeec--cCCCCChhhH
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVF--DCIGDPPEER 304 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi--~~l~el~~~l 304 (320)
||||+.||+.|.+.+|+...+ |+..+...+.||+++ ++++.+...+
T Consensus 621 ~vGDG~ND~paL~~AdvGIAm---g~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 621 MAGDGVNDAPALAKADIGIAM---GTGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp EEECSSTTHHHHHHSSEEEEE---SSSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred EEECChHhHHHHHhCCEEEEe---CCccHHHHHhCCEEEccCCHHHHHHHH
Confidence 999999999999999966555 667777778899998 5566665544
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.54 E-value=5.8e-08 Score=98.69 Aligned_cols=125 Identities=15% Similarity=0.095 Sum_probs=85.8
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc--eeEEeCCCCC------------------CCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK--IQIFAGDVVP------------------RKK 234 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~--~~i~~~d~~~------------------~~K 234 (320)
-++.|++.++++.|++.|++++++|+.+...+..+.+++|+...... ..++++++.. +-.
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 35789999999999999999999999999999999999977543210 0233332111 111
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc--CCCCChhhH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD--CIGDPPEER 304 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~--~l~el~~~l 304 (320)
|+ --..+++.++-..+.++|+||+.||+.|.+.|++...+ |+..+...+.||+++. ++..+...+
T Consensus 682 P~--~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam---g~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 682 PS--HKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM---GSGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp SS--HHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE---TTSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred HH--HHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe---CCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 22 12223333333347899999999999999999987665 5555555678999984 465555544
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.1e-08 Score=88.25 Aligned_cols=81 Identities=14% Similarity=0.221 Sum_probs=63.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCCCCCCCCCCHHHHHHHHHHc-CCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAASTL-GVDPS 252 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~-g~~~~ 252 (320)
+.+.||+.++|+.+. .++.++|.|.+...++..+++.++... +|.. .+++.++.+. .|.+-++++ |.+++
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~-ri~sr~~~g~------~~~KdL~~L~~~dl~ 145 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDSGS------LAQKSLRRLFPCDTS 145 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSS-CEECTTTSSC------SSCCCGGGTCSSCCT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeee-EEEEecCCCC------cceecHHHhcCCCCc
Confidence 677999999999999 579999999999999999999996665 5553 5666665432 122335554 99999
Q ss_pred cEEEEecCHhh
Q 020874 253 SCVVVEDSTIG 263 (320)
Q Consensus 253 ~~v~VGDs~~D 263 (320)
++|+|+|++.-
T Consensus 146 ~viiiDd~~~~ 156 (372)
T 3ef0_A 146 MVVVIDDRGDV 156 (372)
T ss_dssp TEEEEESCSGG
T ss_pred eEEEEeCCHHH
Confidence 99999999853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-05 Score=70.17 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=35.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL 213 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~ 213 (320)
.+||++.++++.|+++|++++|||.+....++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 58999999999999999999999999999998888764
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.28 E-value=8e-08 Score=79.04 Aligned_cols=95 Identities=12% Similarity=0.048 Sum_probs=71.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc-ccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~-~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
+...||+.++|+.+. +++.++|.|.+...+++.+++.++.. .+|. .++..+...... ..|.+.++.+|.++++
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~--~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~ 131 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS--YNLFKEHCVYKD---GVHIKDLSKLNRDLSK 131 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEE--EEECGGGSEEET---TEEECCGGGSCSCGGG
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE--EEEEecceeEEC---CeeeecHHHhCCChHH
Confidence 456799999999998 57999999999999999999998654 3565 445444332111 1245567788999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEE
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCI 275 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v 275 (320)
+|+|+|++.........|+...
T Consensus 132 vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 132 VIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp EEEEESCTTTTTTCGGGEEECC
T ss_pred EEEEECCHHHHhhCccCceEee
Confidence 9999999988766555565443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.3e-06 Score=88.88 Aligned_cols=125 Identities=14% Similarity=0.106 Sum_probs=82.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc----------------------ceeEEeCCCC---
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE----------------------KIQIFAGDVV--- 230 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~----------------------~~~i~~~d~~--- 230 (320)
++.|++.+.++.|++.|++++++|+.+...+..+.+++|+..... ...++.++++
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 478999999999999999999999999999999999987642100 0012222111
Q ss_pred ---------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC-CCCcccccCCCeec
Q 020874 231 ---------------PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS-YTAEEDFLNADAVF 294 (320)
Q Consensus 231 ---------------~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g-~~~~~~~~~a~~vi 294 (320)
-..+..|+--..+.+.+.-..+.+.|+||+.||+.|.+.|++...+ | +..+...+.||+++
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm---g~~gtd~ak~aAD~Vl 755 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM---GISGSDVSKQAADMIL 755 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE---SSSCCHHHHHHCSEEE
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe---CCccCHHHHHhcCEEe
Confidence 1112223333333332222235789999999999999999977766 5 45555567899987
Q ss_pred cC--CCCChhh
Q 020874 295 DC--IGDPPEE 303 (320)
Q Consensus 295 ~~--l~el~~~ 303 (320)
.+ +..+.+.
T Consensus 756 ~~~~~~~I~~~ 766 (1028)
T 2zxe_A 756 LDDNFASIVTG 766 (1028)
T ss_dssp TTCCTHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 54 4444443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.3e-06 Score=85.64 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=78.9
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccc-ccee-EEeC----------------CCCCCCCC--
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQ-IFAG----------------DVVPRKKP-- 235 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~-~~~~-i~~~----------------d~~~~~KP-- 235 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+.... +... ++++ +...+-.|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 58899999999999999999999999999999999999774311 0000 0000 00112223
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeecc
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~ 295 (320)
|.++++.+ ++.| +.+.|+||+.||..|.+.|++...+ +.+.+...+.||+++.
T Consensus 615 K~~iV~~L-q~~g---~~Vam~GDGvNDapaLk~AdvGIAm---g~gtd~ak~aADiVl~ 667 (920)
T 1mhs_A 615 KYNVVEIL-QQRG---YLVAMTGDGVNDAPSLKKADTGIAV---EGSSDAARSAADIVFL 667 (920)
T ss_dssp HHHHHHHH-HTTT---CCCEECCCCGGGHHHHHHSSEEEEE---TTSCHHHHHSSSEEES
T ss_pred HHHHHHHH-HhCC---CeEEEEcCCcccHHHHHhCCcCccc---ccccHHHHHhcCeEEc
Confidence 33344433 3333 6799999999999999999977666 5555555678999874
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.13 E-value=8.3e-06 Score=83.17 Aligned_cols=122 Identities=13% Similarity=0.064 Sum_probs=81.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc----------------------ceeEEeCCCCC-
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE----------------------KIQIFAGDVVP- 231 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~----------------------~~~i~~~d~~~- 231 (320)
-++.|++.+.++.|+++|++++++|+.+...+..+.+.+|+..... ...++.+.+..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 3688999999999999999999999999999999988886632100 00112211100
Q ss_pred -----------------CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCC-CCCcccccCCCee
Q 020874 232 -----------------RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSS-YTAEEDFLNADAV 293 (320)
Q Consensus 232 -----------------~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g-~~~~~~~~~a~~v 293 (320)
..+-.|+.-..+.+.+.-..+.++++||+.||+.|.+.||+...+ | +..+..++.||++
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM---g~ng~d~aK~aAD~V 759 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM---GIAGSDAAKNAADMI 759 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe---CCccCHHHHHhcCEE
Confidence 011122222223333322335689999999999999999977665 6 6666677889999
Q ss_pred ccCCCC
Q 020874 294 FDCIGD 299 (320)
Q Consensus 294 i~~l~e 299 (320)
+.+-++
T Consensus 760 l~~~~~ 765 (1034)
T 3ixz_A 760 LLDDNF 765 (1034)
T ss_pred eccCCc
Confidence 866443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.08 E-value=1.5e-05 Score=61.48 Aligned_cols=36 Identities=6% Similarity=0.111 Sum_probs=28.1
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL 213 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~ 213 (320)
.|++.++|+.|+++|++++++|+.+.......++.+
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l 61 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC 61 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH
Confidence 478999999999999999999998754444444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.9e-06 Score=84.74 Aligned_cols=113 Identities=18% Similarity=0.068 Sum_probs=77.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccc-ccceeEEeCCC-------------------CCCCCC
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER-AEKIQIFAGDV-------------------VPRKKP 235 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~-~~~~~i~~~d~-------------------~~~~KP 235 (320)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++|+... .+. .++.+.+ ..+-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~-~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTT-SSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCc-ceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 5789999999999999999999999999999999999876421 110 1111110 111122
Q ss_pred --CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC
Q 020874 236 --DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC 296 (320)
Q Consensus 236 --~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~ 296 (320)
|.++++.+. +.| +.+.|+||+.||..+.+.|++...+ +...+...+.||+++.+
T Consensus 567 ~~K~~iV~~lq-~~g---~~Vam~GDGvNDapaLk~AdvGIAm---g~gtd~ak~aADivl~~ 622 (885)
T 3b8c_A 567 EHKYEIVKKLQ-ERK---HIVGMTGDGVNDAPALKKADIGIAV---ADATDAARGASDIVLTE 622 (885)
T ss_dssp HHHHHHHHHHH-HTT---CCCCBCCCSSTTHHHHHHSSSCCCC---SSSHHHHGGGCSSCCSS
T ss_pred HHHHHHHHHHH-HCC---CeEEEEcCCchhHHHHHhCCEeEEe---CCccHHHHHhcceeecc
Confidence 233343333 333 6789999999999999999977665 44455555679988754
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.84 E-value=3.1e-05 Score=58.56 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEK 204 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~ 204 (320)
.+.+++.++|+.|+++|++++++|+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 44588889999999999999999998653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=9.5e-05 Score=62.73 Aligned_cols=28 Identities=7% Similarity=-0.171 Sum_probs=21.7
Q ss_pred CCCcEEEEecC----HhhHHHHHHcCCeEEEE
Q 020874 250 DPSSCVVVEDS----TIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 250 ~~~~~v~VGDs----~~Di~~A~~aG~~~v~v 277 (320)
+++++++|||+ .||+.|.+.+|...+.+
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v 229 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV 229 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEe
Confidence 46788899995 89999988887655554
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.48 E-value=1.8e-05 Score=69.58 Aligned_cols=96 Identities=11% Similarity=0.240 Sum_probs=64.2
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc-ceeEEeCC-C-CC-CCCCCHHHHHHHHHHc-----
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE-KIQIFAGD-V-VP-RKKPDPAIYTLAASTL----- 247 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~-~~~i~~~d-~-~~-~~KP~~~~~~~~~~~~----- 247 (320)
..||+.++|+.+.+. +.++|.|.+...+++.+++.++....+. ...++... . +. ..+..+..|.+-+..+
T Consensus 165 ~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 369999999999964 9999999999999999999986544321 11223211 1 11 0111111233344455
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCe
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMK 273 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~ 273 (320)
|.+++++|+|+|++.-.......|+.
T Consensus 244 ~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 244 QYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp TCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred CCChhHEEEEeCChHHhccCcCceEE
Confidence 88999999999999877766666644
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0014 Score=60.31 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=75.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhc------C---cccccceeEEeCCCC----------------
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL------G---PERAEKIQIFAGDVV---------------- 230 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~------~---~~~~~~~~i~~~d~~---------------- 230 (320)
..-|.+...|+.|++.|.++.++||.+-..++..+..+. + .++|| .|++.-.-
T Consensus 186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFD--vVIv~A~KP~FF~~~~~~~~v~~~ 263 (470)
T 4g63_A 186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITLANKPRFFYDNLRFLSVNPE 263 (470)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCS--EEEESCCTTHHHHSCCCEEEECTT
T ss_pred hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcC--EEEECCCCCCcccCCCcceEEECC
Confidence 346899999999999999999999999999999998875 2 24566 44432110
Q ss_pred -C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHH-cCCeEEEEcCC
Q 020874 231 -P-------RKKPD---PAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKA-AGMKCIVTKSS 280 (320)
Q Consensus 231 -~-------~~KP~---~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~-aG~~~v~v~~g 280 (320)
+ ..+|. .--...+.+.+|+...+++||||+. .||..++. .|+.++.|-..
T Consensus 264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp TCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred CCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 0 00110 0113456677899889999999999 79888876 69999998654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00026 Score=59.68 Aligned_cols=68 Identities=10% Similarity=-0.099 Sum_probs=53.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCeEEEEcCCCCCcccccCCCeeccC---CCCChhhH
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA--GMKCIVTKSSYTAEEDFLNADAVFDC---IGDPPEER 304 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a--G~~~v~v~~g~~~~~~~~~a~~vi~~---l~el~~~l 304 (320)
.+.+--|...++.+++++| +++|||+.||+.|.+.+ |...++ ++. .+.|++++.+ -+.+.+.|
T Consensus 155 ~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam---~Na----~~~A~~v~~~~~~~~gV~~~l 222 (239)
T 1u02_A 155 RVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV---GEG----ETHAKFHVADYIEMRKILKFI 222 (239)
T ss_dssp ECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE---SSS----CCCCSEEESSHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE---CCC----CCcceEEeCCCCCHHHHHHHH
Confidence 3556678999999999998 99999999999999999 977776 444 3578888877 44466666
Q ss_pred Hhhhh
Q 020874 305 FDLAF 309 (320)
Q Consensus 305 ~~~~~ 309 (320)
.+++.
T Consensus 223 ~~~~~ 227 (239)
T 1u02_A 223 EMLGV 227 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=55.92 Aligned_cols=44 Identities=2% Similarity=-0.190 Sum_probs=29.6
Q ss_pred cCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEcCCCCCcccccCCCe
Q 020874 247 LGVDPSSCVVVED----STIGLAAAKAAGMKCIVTKSSYTAEEDFLNADA 292 (320)
Q Consensus 247 ~g~~~~~~v~VGD----s~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~ 292 (320)
+|++++++++||| +.||+.|.+.+|...+.+ ++..++.++.|++
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av--~Na~~~vk~~A~~ 244 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV--TAPEDTRRICELL 244 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC--SSHHHHHHHHHHH
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe--eCCCHHHHHHHhh
Confidence 3558899999999 999999999998645544 4444444444444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00014 Score=62.24 Aligned_cols=65 Identities=3% Similarity=-0.167 Sum_probs=50.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVED----STIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGD----s~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
++.+-.|..+++.+ +|++++++++||| +.||+.|.+.+|...+.+ ++..+..++.|++++++-+|
T Consensus 192 ~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 192 FPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp EETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHCTTC--
T ss_pred ecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHHhhheeCCCCcC
Confidence 34566678888888 8999999999999 999999999999766666 56666666677887766543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00082 Score=56.52 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=28.4
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF 212 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~ 212 (320)
+.+...++|++|+++| +++++|+.+...+...++.
T Consensus 24 i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~ 58 (239)
T 1u02_A 24 ADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPL 58 (239)
T ss_dssp CCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCS
T ss_pred CCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhcc
Confidence 3467778999999999 9999999988777666554
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0019 Score=55.08 Aligned_cols=31 Identities=19% Similarity=0.348 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV 210 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l 210 (320)
+...+.|++|+++ ++++++|+.+...+...+
T Consensus 33 ~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l 63 (262)
T 2fue_A 33 PEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQL 63 (262)
T ss_dssp HHHHHHHHHHTTT-SEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CEEEEEcCCCHHHHHHHH
Confidence 4455778888888 999999998766554444
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.062 Score=44.58 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=66.9
Q ss_pred HHHHHHHHHHc-CCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 020874 181 VAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVED 259 (320)
Q Consensus 181 ~~e~l~~L~~~-G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGD 259 (320)
+...|.....+ ...-++||++.-.....++=-+++..+|.-..|+++-.++ |...|+++.+++| ..-.-|+|||
T Consensus 164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvIGD 238 (274)
T 3geb_A 164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVIGD 238 (274)
T ss_dssp HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEEES
T ss_pred HHHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEECC
Confidence 45555555544 3445566766554444444444677777766788776543 5889999999998 4466789999
Q ss_pred CHhhHHHHHHcCCeEEEEc
Q 020874 260 STIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 260 s~~Di~~A~~aG~~~v~v~ 278 (320)
+...-++|+..+++++-|.
T Consensus 239 G~eEe~AAk~~n~PFwrI~ 257 (274)
T 3geb_A 239 GVEEEQGAKKHNMPFWRIS 257 (274)
T ss_dssp SHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHHcCCCeEEee
Confidence 9999999999999999765
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.00064 Score=57.32 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=23.2
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHc
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK 107 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 107 (320)
+.+|+|+||+||||++.... +.+...++++++
T Consensus 4 ~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~l 35 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQK-ITKEMDDFLQKL 35 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCcc-cCHHHHHHHHHH
Confidence 56799999999999997764 334455555554
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.03 Score=51.03 Aligned_cols=80 Identities=14% Similarity=0.219 Sum_probs=61.2
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcc-cccceeEEeCCCCCCCCCCHHHHHHHHHH-cCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDPAIYTLAAST-LGVDPS 252 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~-~~~~~~i~~~d~~~~~KP~~~~~~~~~~~-~g~~~~ 252 (320)
+...||+.++|+.+.+ ++.++|.|.+...++..+++.+.... +|.. .+++.+..+.. +.+-+.+ +|.+.+
T Consensus 82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~-Rl~sRd~cg~~------~~KdL~~ll~rdl~ 153 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDSGSL------AQKSLRRLFPCDTS 153 (442)
T ss_dssp EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTT-CEECTTTSSCS------SCCCGGGTCSSCCT
T ss_pred EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccc-eEEEecCCCCc------eeeehHHhcCCCcc
Confidence 6778999999999985 69999999999999999999996555 4553 57766654321 1112333 488999
Q ss_pred cEEEEecCHh
Q 020874 253 SCVVVEDSTI 262 (320)
Q Consensus 253 ~~v~VGDs~~ 262 (320)
++|+|+|++.
T Consensus 154 ~vvIIDd~p~ 163 (442)
T 3ef1_A 154 MVVVIDDRGD 163 (442)
T ss_dssp TEEEEESCSG
T ss_pred eEEEEECCHH
Confidence 9999999984
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.074 Score=47.26 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=57.2
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCc---hHHHHHHHH-HhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVS-FLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~---~~~~~~~l~-~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
++||+.++|+.|++.|+++.++||++ .......|. .+|+..-.+ .|+++...-. . .++ ...
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~--~i~ts~~~~~-----~----~~~----~~~ 94 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL--QIIQSHTPYK-----S----LVN----KYS 94 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG--GEECTTGGGG-----G----GTT----TCS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh--hEeehHHHHH-----H----HHh----cCC
Confidence 46999999999999999999999985 334444554 566543334 6776653210 0 111 225
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEEE
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIVT 277 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~v 277 (320)
.+++||-. .-.+.++++|+..+..
T Consensus 95 ~v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 95 RILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp EEEEESST-THHHHHHHHTCSEEEE
T ss_pred EEEEECCH-HHHHHHHhCCCeEecc
Confidence 67777755 6677888999998863
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0072 Score=51.83 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=36.8
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcC---CchHHHHHHHHHhcCc-ccccceeEEeC
Q 020874 178 RPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP-ERAEKIQIFAG 227 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~---~~~~~~~~~l~~~~~~-~~~~~~~i~~~ 227 (320)
+|++.+.|+.|+++|++++++|| .........++.++.. ..++ .++++
T Consensus 32 ~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~--~ii~~ 83 (284)
T 2hx1_A 32 LPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITAD--KIISS 83 (284)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGG--GEEEH
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHh--hEEcH
Confidence 58999999999999999999998 4556677778887665 4444 45543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.96 E-value=0.35 Score=40.59 Aligned_cols=84 Identities=20% Similarity=0.184 Sum_probs=51.8
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcCCchHHHHHH---HHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI---VSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~---l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
+|++.++|+.|+++|++++++||+........ ++.+|.....+ .++++.. .....+++.. ...++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~--~i~~~~~---------~~~~~l~~~~-~~~~v 86 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSS--IIITSGL---------ATRLYMSKHL-DPGKI 86 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGG--GEEEHHH---------HHHHHHHHHS-CCCCE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEEecHH---------HHHHHHHHhC-CCCEE
Confidence 48999999999999999999999875444444 44444432223 4554321 2222333322 23567
Q ss_pred EEEecCHhhHHHHHHcCCeE
Q 020874 255 VVVEDSTIGLAAAKAAGMKC 274 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~ 274 (320)
.++|+. .....++..|+..
T Consensus 87 ~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 87 FVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp EEESCH-HHHHHHHHHTSCB
T ss_pred EEEcCH-HHHHHHHHcCCee
Confidence 778874 5666777777653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.09 E-value=0.37 Score=40.41 Aligned_cols=42 Identities=12% Similarity=0.036 Sum_probs=33.6
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcC---CchHHHHHHHHHhcCcccc
Q 020874 178 RPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGPERA 219 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~---~~~~~~~~~l~~~~~~~~~ 219 (320)
.|++.++|++|+++|++++++|| .+...+...++.++.....
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 48899999999999999999999 5666677777777654333
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=90.68 E-value=0.85 Score=36.70 Aligned_cols=89 Identities=17% Similarity=0.193 Sum_probs=52.7
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA-GDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~-~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~V 257 (320)
-++.+.|..+++.+-++++++-.+.-.--..+..+...+... ..+. .++. ...++ -++.-|++ ++|
T Consensus 81 ~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~--~~~~~~~e~------~~~i~-~l~~~G~~----vvV 147 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKE--FLFSSEDEI------TTLIS-KVKTENIK----IVV 147 (196)
T ss_dssp HHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEE--EEECSGGGH------HHHHH-HHHHTTCC----EEE
T ss_pred hHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEE--EEeCCHHHH------HHHHH-HHHHCCCe----EEE
Confidence 356777777778788999998543322222333332222221 2222 2222 23333 34455764 799
Q ss_pred ecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 258 EDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 258 GDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
||+.. ...|++.|++++++..|.
T Consensus 148 G~~~~-~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 148 SGKTV-TDEAIKQGLYGETINSGE 170 (196)
T ss_dssp ECHHH-HHHHHHTTCEEEECCCCH
T ss_pred CCHHH-HHHHHHcCCcEEEEecCH
Confidence 98876 788999999999987653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=89.88 E-value=0.048 Score=45.84 Aligned_cols=30 Identities=27% Similarity=0.285 Sum_probs=21.4
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFK 105 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~ 105 (320)
+++|+|+||+||||++....+. +...++++
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~-~~~~~~l~ 31 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQT-DEMRALIK 31 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCC-HHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCCccC-HHHHHHHH
Confidence 4589999999999999876533 33444443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=88.43 E-value=0.8 Score=38.25 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC---CchHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~---~~~~~~~~~l~~~~~~ 216 (320)
|++.++|++|+++|++++++|| .+...+...++.++..
T Consensus 25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 7888999999999999999998 5556666777777554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=86.13 E-value=0.92 Score=37.92 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCC---chHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~---~~~~~~~~l~~~~~~ 216 (320)
|++.++|++++++|++++++||+ +...+...++.++..
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 89999999999999999999964 455566667766554
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=85.14 E-value=1.8 Score=35.59 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC-CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 020874 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-DVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258 (320)
Q Consensus 180 g~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~-d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VG 258 (320)
++.+.|..+++.+-++++++-.+.-.--..+..+...+... ..+.. ++. ...++ -++.-|++ ++||
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~--~~~~~~ee~------~~~i~-~l~~~G~~----vVVG 160 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQ--RSYITEEDA------RGQIN-ELKANGTE----AVVG 160 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEE--EEESSHHHH------HHHHH-HHHHTTCC----EEEE
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEE--EEeCCHHHH------HHHHH-HHHHCCCC----EEEC
Confidence 45566666666677999998654333223333332322221 22222 121 12222 33445664 7999
Q ss_pred cCHhhHHHHHHcCCeEEEEc
Q 020874 259 DSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 259 Ds~~Di~~A~~aG~~~v~v~ 278 (320)
|+.. ...|++.|++++++.
T Consensus 161 ~~~~-~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 161 AGLI-TDLAEEAGMTGIFIY 179 (225)
T ss_dssp SHHH-HHHHHHTTSEEEESS
T ss_pred CHHH-HHHHHHcCCcEEEEC
Confidence 8876 788999999999986
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=84.04 E-value=18 Score=30.28 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=60.2
Q ss_pred CChhHHHHHHHHHH---cCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC--CCCCHHHHHHHHHHcCCCC
Q 020874 177 LRPGVAKLIDQALE---KGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR--KKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 177 ~~pg~~e~l~~L~~---~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~--~KP~~~~~~~~~~~~g~~~ 251 (320)
++|+..++++..+. .|+++..+++.+.. .-..+..+|- .. .+-.+..++. +--+++.++.+.+..+++
T Consensus 117 llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~-~akrl~~~G~-~a----VmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP- 189 (265)
T 1wv2_A 117 LFPNVVETLKAAEQLVKDGFDVMVYTSDDPI-IARQLAEIGC-IA----VMPLAGLIGSGLGICNPYNLRIILEEAKVP- 189 (265)
T ss_dssp CCBCHHHHHHHHHHHHTTTCEEEEEECSCHH-HHHHHHHSCC-SE----EEECSSSTTCCCCCSCHHHHHHHHHHCSSC-
T ss_pred cCcCHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHhCC-CE----EEeCCccCCCCCCcCCHHHHHHHHhcCCCC-
Confidence 45777777655554 59999965555554 4445555532 11 1221222333 335788998888865654
Q ss_pred CcEEEEe---cCHhhHHHHHHcCCeEEEEcCC
Q 020874 252 SSCVVVE---DSTIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 252 ~~~v~VG---Ds~~Di~~A~~aG~~~v~v~~g 280 (320)
|+++ .++.|+..|.+.|+..|++..+
T Consensus 190 ---VI~eGGI~TPsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 190 ---VLVDAGVGTASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp ---BEEESCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred ---EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 5555 5568999999999999999764
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.97 E-value=0.51 Score=37.98 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=14.6
Q ss_pred CceEEEEeCCCccccCC
Q 020874 76 LPSALLFDCDGVLVDTE 92 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~ 92 (320)
..+++|+|+||||+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 35799999999999865
|
| >2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5 | Back alignment and structure |
|---|
Probab=83.18 E-value=2 Score=35.65 Aligned_cols=130 Identities=16% Similarity=0.182 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCC--------------chHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTS--------------NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~--------------~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
.-+.+.++..+++|+.|+.-=+. +.+....++-+++-..-|- -..+..+..-||+...|..++
T Consensus 43 ~~M~~tv~lA~~~gV~IGAHPgypDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a---~~~G~~l~hVKPHGALYN~~~ 119 (250)
T 2dfa_A 43 GRILEAVRLAKAHGVAVGAHPGFPDLVGFGRREMALSPEEVYADVLYQIGALSAFL---KAEGLPLHHVKPHGALYLKAC 119 (250)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSCTTTTTCSCCCCCHHHHHHHHHHHHHHHHHHH---HHTTCCCCCBCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEecCCCCCcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHcCCEeEEeccCHHHHHHHh
Confidence 34678888899999999986543 2333444555543322221 123345678999999888766
Q ss_pred HHc-----------CCCCCcEEEEecCHhhHHHHHHcCCeEEE---EcCCCCCcccc---cCCCeeccCCCCChhhHHhh
Q 020874 245 STL-----------GVDPSSCVVVEDSTIGLAAAKAAGMKCIV---TKSSYTAEEDF---LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 245 ~~~-----------g~~~~~~v~VGDs~~Di~~A~~aG~~~v~---v~~g~~~~~~~---~~a~~vi~~l~el~~~l~~~ 307 (320)
+.- .++|+=.++.=.+..=.+.|+++|++++. ..+.|..+..+ ..+..++++.++..+-.+++
T Consensus 120 ~d~~~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~E~FADR~Y~~dG~LvpR~~~gAvi~d~~~~~~rv~~m 199 (250)
T 2dfa_A 120 RDRETARAIALAVKAFDPGLPLVVLPGTVYEEEARKAGLRVVLEAFPERAYLRSGQLAPRSMPGSWITDPEEAARRALRM 199 (250)
T ss_dssp HCHHHHHHHHHHHHHHCTTCCEEECTTSHHHHHHHHTTCCEEEEECTTBCBCTTSSBCCTTSTTCBCCCHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEEeeccccCCCCCEecCCCCCCccCCHHHHHHHHHHH
Confidence 422 23565556665555678999999999876 34566666665 46888999999988888888
Q ss_pred hhcc
Q 020874 308 AFCG 311 (320)
Q Consensus 308 ~~~~ 311 (320)
+..+
T Consensus 200 ~~~g 203 (250)
T 2dfa_A 200 VLEG 203 (250)
T ss_dssp HHTS
T ss_pred HHCC
Confidence 7544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=82.93 E-value=2.1 Score=36.22 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=34.5
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 23 i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 23 ISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4577889999999999999999999988888888887653
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=81.91 E-value=1.8 Score=36.51 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+...++|++|+++|++++++|+.+...+...++.++..
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 55789999999999999999999999899999888653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=81.61 E-value=2.4 Score=34.53 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.+...++|+.|+++|++++++|+.+...+...++.++..
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence 45688999999999999999999999988888888887543
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=81.12 E-value=2.2 Score=36.48 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=31.2
Q ss_pred ChhHHHHHHHHHHcCCeEEEEcC---CchHHHHHHHHHhcCc
Q 020874 178 RPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP 216 (320)
Q Consensus 178 ~pg~~e~l~~L~~~G~~i~lvT~---~~~~~~~~~l~~~~~~ 216 (320)
+|++.+.|+.|+++|++++++|| .........++.++..
T Consensus 39 ~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 39 VPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 58899999999999999999997 4455566677776553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 320 | ||||
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 2e-25 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 4e-22 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 2e-21 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 2e-20 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-20 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 1e-19 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 6e-19 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 6e-18 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 1e-17 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 2e-17 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 8e-17 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 1e-16 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 1e-16 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 1e-15 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 4e-15 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 7e-15 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 1e-14 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-14 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 6e-14 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 1e-13 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 5e-07 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-06 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 3e-06 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 6e-06 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 6e-06 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 1e-05 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 5e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-05 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 6e-05 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 5e-04 |
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 99.4 bits (246), Expect = 2e-25
Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 6/211 (2%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
FD DGVL G +F + + L + + Y G ++ M +
Sbjct: 2 VAAFDLDGVLALPSIAG---AFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58
Query: 139 GWPEKAPSD-EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
W + K A+L + + + + + + +KG +
Sbjct: 59 QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118
Query: 198 CSTSNEKAVTAIVSFLL--GPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255
+ + S + V KP+P IY TL P+ V
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVV 178
Query: 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEED 286
++D L A+ GM I+ ++ +A +
Sbjct: 179 FLDDFGSNLKPARDMGMVTILVHNTASALRE 209
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 89.8 bits (221), Expect = 4e-22
Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 16/207 (7%)
Query: 81 LFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW 140
+FD V+VD + + +++D + + + + G+ A+
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCH 63
Query: 141 PEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCST 200
P E+ F + + LRP V ++ + E+G +V V S
Sbjct: 64 EMALPLSYEQ---------------FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSN 108
Query: 201 SNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDS 260
+N T A + +KP+ IY G PS V +D+
Sbjct: 109 TNRLHTTFWPEEYPEIRDAADHIYL-SQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDN 167
Query: 261 TIGLAAAKAAGMKCIVTKSSYTAEEDF 287
+ A G+ I+ K T + F
Sbjct: 168 ADNIEGANQLGITSILVKDKTTIPDYF 194
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 88.3 bits (217), Expect = 2e-21
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 17/228 (7%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DG+L+D+E + D LGV EL G + M
Sbjct: 5 AAIFDMDGLLIDSEPL-WDRAELDVMAS--LGVDISRR--NELPDTLGLRIDMVVDLWYA 59
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P PS +E ++ IA E L PGV + + E+G+ V +
Sbjct: 60 RQPWNGPSRQEVVERVIARAISLVEETRP---------LLPGVREAVALCKEQGLLVGLA 110
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S + +++ R + + + +P KP P +Y A+ LGVDP +CV +E
Sbjct: 111 SASPLHMLEKVLTM--FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALE 168
Query: 259 DSTIGLAAAKAAGMKCIVTKSSYTA-EEDFLNADAVFDCIGDPPEERF 305
DS G+ A+KAA M+ IV + + F+ A+ + + +
Sbjct: 169 DSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 216
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (211), Expect = 2e-20
Identities = 39/220 (17%), Positives = 67/220 (30%), Gaps = 10/220 (4%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A +FD DGVL T + L D + + G M +
Sbjct: 4 AAVFDLDGVLALPAVF---GVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLS 60
Query: 139 GWPE---KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
W + E + + E+F I + + + +KG
Sbjct: 61 QWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTT 118
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKI--QIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253
A+ + + + + V KP+P IY TL PS
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178
Query: 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAV 293
V ++D L A+ GM I+ + + TA ++ +
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 218
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 86.0 bits (211), Expect = 3e-20
Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 10/207 (4%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE---RMTAYF 135
A++F G VD F + F + GV + + +G K R
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIF--HKRGVAITAEEARKP--MGLLKIDHVRALTEM 59
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
+ + + I +++ E+ ++ + P+ GV ++I E+G+K+
Sbjct: 60 PRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI-NGVKEVIASLRERGIKI 118
Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV-DPSSC 254
+ + + IV+ + + + D VP +P P + A LGV +
Sbjct: 119 GSTTGYTRE-MMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHM 177
Query: 255 VVVEDSTIGLAAAKAAGMKCIVTKSSY 281
+ V D+ + + AGM +
Sbjct: 178 IKVGDTVSDMKEGRNAGMWTVGVILGS 204
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 83.7 bits (205), Expect = 1e-19
Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 15/225 (6%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+LFD DGV+ DT + H ++ +E +G+ + E LK ++ + +
Sbjct: 4 AVLFDLDGVITDTAEY-HFRAWKALAEE--IGINGVDRQFNEQLKGVSREDSLQKILDLA 60
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
A +E K+ + K ++ + PG+ +L+ +K+A+
Sbjct: 61 DKKVSAEEFKELAKRKNDNYVKMIQDVSPA-------DVYPGILQLLKDLRSNKIKIALA 113
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
S S ++ + + I A + PD I A GV PS + +E
Sbjct: 114 SASKNG--PFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV--GVAPSESIGLE 169
Query: 259 DSTIGLAAAKAAGMKCI-VTKSSYTAEEDFLNADAVFDCIGDPPE 302
DS G+ A K +G I V + ++ + D + E
Sbjct: 170 DSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKE 214
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 82.5 bits (202), Expect = 6e-19
Identities = 31/241 (12%), Positives = 73/241 (30%), Gaps = 26/241 (10%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK-IGGGKERMTAYF 135
+L D +G I F + ++ L W+ + + + + E
Sbjct: 9 VILLDIEGTTTPIAFV-KDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 67
Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-------------------LP 176
P + + ++ +Q I ++ + +
Sbjct: 68 GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 127
Query: 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD 236
V + + E G+KV + S+ + +A + ++ D K +
Sbjct: 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS-TEGDILELVDGHFDTKIGHKVE 186
Query: 237 PAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA--EEDFLNADAVF 294
Y A ++G ++ + + D T +AA+ A + V A +D ++
Sbjct: 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246
Query: 295 D 295
Sbjct: 247 T 247
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 79.2 bits (193), Expect = 6e-18
Identities = 40/234 (17%), Positives = 75/234 (32%), Gaps = 29/234 (12%)
Query: 79 ALLFDCDGVLVDTEKD---------GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
+ FD G L D G + +++K+L TW L + E
Sbjct: 4 GIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATE 63
Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
+ + + L V + +
Sbjct: 64 DALRFTCRHLGLDLDARTRSTLCDAYLRLAPF-----------------SEVPDSLRELK 106
Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV 249
+G+K+A+ S + +++ A+VS + + + + D V KPD +Y LA LG+
Sbjct: 107 RRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVYELAEQALGL 164
Query: 250 DPSSCVVVEDSTIGLAAAKAAGMKCI-VTKSSYTAEEDFLNADAVFDCIGDPPE 302
D S+ + V + A+ G + ++ EE D + E
Sbjct: 165 DRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 218
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 78.3 bits (191), Expect = 1e-17
Identities = 41/227 (18%), Positives = 71/227 (31%), Gaps = 14/227 (6%)
Query: 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
+LFD DG L+ E +R D E G + K+ G + + G
Sbjct: 5 VLFDIDGTLLKVESM-NRRVLADALIE-VYGTEGSTGSHDFSGKMDG--AIIYEVLSNVG 60
Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
E + LF ++ + L GV +L+D + +
Sbjct: 61 LER------AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLL 114
Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLA--ASTLGVDPSSCVVV 257
T N +A L G + FA D + R + A + PS V++
Sbjct: 115 TGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVII 174
Query: 258 EDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPE 302
D+ + A+ + I + E+ +F + E
Sbjct: 175 GDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 221
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 78.3 bits (191), Expect = 2e-17
Identities = 36/206 (17%), Positives = 60/206 (29%), Gaps = 30/206 (14%)
Query: 79 ALLFDCDGVLVDTEK---------DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
A++FD G L D + G +++K+L +W L G
Sbjct: 4 AVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
AY T E DE + ++ +L PL+ + +
Sbjct: 64 EALAYTLGTLGLEP---DESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDM 120
Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGV 249
+ + T + + + D KP P Y L LGV
Sbjct: 121 LQALVANAGLTDS------------------FDAVISVDAKRVFKPHPDSYALVEEVLGV 162
Query: 250 DPSSCVVVEDSTIGLAAAKAAGMKCI 275
P+ + V + + AK G
Sbjct: 163 TPAEVLFVSSNGFDVGGAKNFGFSVA 188
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 76.0 bits (185), Expect = 8e-17
Identities = 55/230 (23%), Positives = 79/230 (34%), Gaps = 24/230 (10%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
++FDCDGVLVD+E + E G V+ GE +
Sbjct: 4 LIIFDCDGVLVDSEII-AAQVESRLL--TEAGYPISVEEMGERF----AGMTWKNILLQV 56
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P + L R ++ K R + I
Sbjct: 57 ESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCI-----------CS 105
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
++S+ + + L P A I R KP P I+ A+ GV P VVVE
Sbjct: 106 NSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVE 165
Query: 259 DSTIGLAAAKAAGMKCI-VTKSSYTAEEDF-----LNADAVFDCIGDPPE 302
DS G+ A+AAGM+ I T +S+T A+ V + D P
Sbjct: 166 DSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPA 215
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 74.8 bits (182), Expect = 1e-16
Identities = 28/207 (13%), Positives = 59/207 (28%), Gaps = 28/207 (13%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
++D G L+D + +F +T G+T D D + K
Sbjct: 5 DYIWDLGGTLLDNYET-STAAFVETLAL--YGITQDHDSVYQ--------------ALKV 47
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
P + + F+ + L L + + I +
Sbjct: 48 STPFAIETFAPNLENFLEKYKEN---EARELEHPILFEGVSDLLEDISN------QGGRH 98
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
+ + + A ++ ++KP+P + +V+
Sbjct: 99 FLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIG 156
Query: 259 DSTIGLAAAKAAGMKCIVTKSSYTAEE 285
D I + A +AAG+ + S +
Sbjct: 157 DRPIDIEAGQAAGLDTHLFTSIVNLRQ 183
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 75.2 bits (183), Expect = 1e-16
Identities = 26/211 (12%), Positives = 60/211 (28%), Gaps = 22/211 (10%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
+A ++D DG L+D+ + +TF + + +D + ++ +
Sbjct: 2 TAFIWDLDGTLLDSYEA-ILSGIEETF--AQFSIPYDKE---KVREFIFKYSVQDLLVRV 55
Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
+ + + + L E G+
Sbjct: 56 AEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGI---------------Q 100
Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVV 257
K A + +I +KP P T ++ + +
Sbjct: 101 QFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 160
Query: 258 EDSTIGLAAAKAAGMKCI-VTKSSYTAEEDF 287
D T+ + A+ +G++ I +S+Y
Sbjct: 161 GDRTLDVEFAQNSGIQSINFLESTYEGNHRI 191
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.5 bits (176), Expect = 1e-15
Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 9/222 (4%)
Query: 78 SALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK--IGGGKERMTA 133
S L D +G + F + + +L KE++ A
Sbjct: 4 STYLLDIEGTVCPISFV-KETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62
Query: 134 YFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
+ + + ++ + ++ + ++ + + ++ I +
Sbjct: 63 HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122
Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253
+ + + A S L I + KK + Y +G S
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDL----NSYIDGYFDINTSGKKTETQSYANILRDIGAKASE 178
Query: 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFD 295
+ + D+ + L AA G+ + A V+
Sbjct: 179 VLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYK 220
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 71.0 bits (172), Expect = 4e-15
Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 13/229 (5%)
Query: 79 ALLFDCDGVLVDTEKDG--HRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
A+ FD G L+ E + H + + L +D Y +L + E + Y
Sbjct: 4 AVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTR-----EAFSNYAG 58
Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE--KKLLPLRPGVAKLIDQALEKGVK 194
K P + +E RK K + + + ++ L P V +++ K
Sbjct: 59 KPYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHV 118
Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254
+ + E + + + + + A GV
Sbjct: 119 GMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKA---GVKGEEA 175
Query: 255 VVVEDSTI-GLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPE 302
V V D+ + +K GM I+ E + D + + + +
Sbjct: 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIK 224
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 69.9 bits (169), Expect = 7e-15
Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 23/221 (10%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
AL+FD DG L +++ + + G + + A
Sbjct: 5 ALMFDIDGTLTNSQPA-YTTVMREVLAT--YGKPFSPAQAQKTF----PMAAEQAMTELG 57
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
+ + + + +AS + + + + ++ +
Sbjct: 58 IAASEFDHFQAQYEDVMASHYDQIELYPGI----------------TSLFEQLPSELRLG 101
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
++++ P + D P++KPDP A + V P + + +
Sbjct: 102 IVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIG 161
Query: 259 DSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299
DS A+AA + + D F D
Sbjct: 162 DSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLD 202
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.3 bits (170), Expect = 1e-14
Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 22/249 (8%)
Query: 62 MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW--DVDLYG 119
M + VR A+ FD D L+DT R + K + + + ++
Sbjct: 1 MGLSRVR----------AVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKEEAEIIC 49
Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLP 176
+ +++ KE Y + +E ++ + +++ E L + + +
Sbjct: 50 DKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMI 109
Query: 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD 236
L V ++ + L K V++ + + + + + + I I + P
Sbjct: 110 LADDVKAMLTE-LRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPS 168
Query: 237 PAIYTLAASTLGVDPSSCVVVEDSTI-GLAAAKAAGMKCIV--TKSSYTAEEDFLNADAV 293
+ LGV P CV+V D+ + AG+K V KS +
Sbjct: 169 IFYHCCDL--LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYM 226
Query: 294 FDCIGDPPE 302
+ + P
Sbjct: 227 VSSVLELPA 235
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 69.4 bits (169), Expect = 5e-14
Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 30/155 (19%)
Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV---- 230
L V L++ G ++ + + L E I V
Sbjct: 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAE 273
Query: 231 -------PRKKPDPAIYTLAA--------------STLGVDPSSCVVVEDSTIGLAAAKA 269
P KP+P Y A V+ +V DS L +A+
Sbjct: 274 NMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK 333
Query: 270 AGMKCIVTKSSYTAEEDF-----LNADAVFDCIGD 299
G I T + ++ +AD V + +G+
Sbjct: 334 IGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 67.6 bits (163), Expect = 6e-14
Identities = 48/223 (21%), Positives = 77/223 (34%), Gaps = 12/223 (5%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
+ FD DG LV++ D +S N K+ L + L+ G
Sbjct: 6 LIGFDLDGTLVNSLPD-LALSINSALKDVNLPQASE-----NLVMTWIGNGADVLSQRAV 59
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
W K E +F KR+ + + L P V + ++ +G +AV
Sbjct: 60 DWACKQAEKELTEDEFKY--FKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVV 117
Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVE 258
+ K V I++ ++ G +P KP PA + G+ P + V
Sbjct: 118 TNKPTKHVQPILTAFGIDHLFSEMLG--GQSLPEIKPHPAPFYYLCGKFGLYPKQILFVG 175
Query: 259 DSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGD 299
DS + AA +AG + Y D +FD D
Sbjct: 176 DSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 218
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 65.6 bits (159), Expect = 1e-13
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 6/110 (5%)
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
L P V +++ + GV VA S ++E + +
Sbjct: 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQ------LLELFDLGKYFIQREIYPGS 99
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE 285
+ GV S V +D + G+ CI + + +
Sbjct: 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQT 149
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 47.8 bits (112), Expect = 5e-07
Identities = 34/247 (13%), Positives = 64/247 (25%), Gaps = 26/247 (10%)
Query: 79 ALLFDCDGVLVDTE--------------KDGHRISF--NDTFKEKELGVTWDVDLYGE-- 120
L D DG + + + F N+T K E + +
Sbjct: 4 GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 63
Query: 121 -LLKIGGGKERMTAYFNKTGWPEKAP-SDEEERKQFIASLHKRKTELFMVLIEKKLLPLR 178
+ Y + +K E I E + L
Sbjct: 64 PASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTEL 123
Query: 179 PGVAKLIDQ-ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
++ A++KG + + G V KP
Sbjct: 124 SYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKA 183
Query: 238 AIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDFLNA----DA 292
I A + LGV+ ++V D+ + + G+ ++ S +T +
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243
Query: 293 VFDCIGD 299
V D + +
Sbjct: 244 VVDSLDE 250
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 45.7 bits (107), Expect = 2e-06
Identities = 27/228 (11%), Positives = 58/228 (25%), Gaps = 48/228 (21%)
Query: 80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
++ D DG + D ++K E
Sbjct: 7 IICDFDGTITMN------------------------DNIINIMKTFAPPEW--MALKDGV 40
Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
+ E + F K E+ ++E +R G + + E + V S
Sbjct: 41 LSKTLSIKEGVGRMFGLLPSSLKEEITSFVLED--AKIREGFREFVAFINEHEIPFYVIS 98
Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGD-----------VVPRKKPDPAIYTLAASTLG 248
+ V ++ ++ +R + L
Sbjct: 99 GGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELS 158
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGM---------KCIVTKSSYTAEEDF 287
+++ DS + AAK + + +C ++ +DF
Sbjct: 159 EPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDF 206
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 45.4 bits (106), Expect = 3e-06
Identities = 38/264 (14%), Positives = 68/264 (25%), Gaps = 54/264 (20%)
Query: 79 ALLFDCDGVLVDTE--------------KDGHRISF-------------------NDTFK 105
+ D DG + + R F
Sbjct: 9 LFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 68
Query: 106 EKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKA--PSDEEERKQFIASLHKRKT 163
+ + + ++ L + G + + E DEE + K T
Sbjct: 69 DDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLT 128
Query: 164 ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ 223
+ L + +A D + S A+ A
Sbjct: 129 YERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEA--------------S 174
Query: 224 IFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYT 282
+ KP+P + + + GV +V D + K AG+ I+ + T
Sbjct: 175 TGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGET 234
Query: 283 AEEDFLNA----DAVFDCIGDPPE 302
ED A D VF +G+ +
Sbjct: 235 TPEDLERAETKPDFVFKNLGELAK 258
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 44.1 bits (102), Expect = 6e-06
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYG 119
A+ FD DG LVD+ +F TFKE + + G
Sbjct: 6 AIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSPDAKTIRG 45
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 44.1 bits (102), Expect = 6e-06
Identities = 6/51 (11%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGD 299
P +++ D+ + A+ G++ + + + D D + +
Sbjct: 154 PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLE 204
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 1e-05
Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF 287
D +KP + + +D ++ V+ D + A+ G+ + + +
Sbjct: 98 DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY------DRET 151
Query: 288 LNADAVFD 295
LN + +
Sbjct: 152 LNWPMIGE 159
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 41.6 bits (96), Expect = 5e-05
Identities = 31/249 (12%), Positives = 62/249 (24%), Gaps = 35/249 (14%)
Query: 79 ALLFDCDGVLVDTE--------------KDGHRISF--------NDTFKEKELGVTWDVD 116
++ D DGVL+ G + + DV
Sbjct: 5 NVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64
Query: 117 LYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEE-RKQFIASLHKRKTELFMVLIEKKLL 175
+ + K + + E K + +
Sbjct: 65 DSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNW 124
Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
+ A + A +N G A +I KP
Sbjct: 125 DMMHKAAYFVANG-------ARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKP 177
Query: 236 DPAIYTLAASTLGVDPSSCVVVEDSTIG-LAAAKAAGMKCIVTKSSYTAEEDFLNA---- 290
P I A + + V+V D+ + A AG++ I+ S ++ +D +
Sbjct: 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRP 237
Query: 291 DAVFDCIGD 299
++ + +
Sbjct: 238 SWIYPSVAE 246
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 5e-05
Identities = 33/204 (16%), Positives = 62/204 (30%), Gaps = 37/204 (18%)
Query: 79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
A+ FD D ++ E D EL KI G ++ ++ +
Sbjct: 12 AVCFDVDSTVIREE-------------------GID-----ELAKICGVEDAVSEMTRRA 47
Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
+ +L + E LI ++ L PG+ +L+ + E+ V+V +
Sbjct: 48 MGGAV---PFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLI 104
Query: 199 STSNEKAVTAIVSFLLGPE--------RAEKIQIFAGDVVPRKKPDPAIYTLAASTL--G 248
S V + S L P + +AG + + L
Sbjct: 105 SGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEK 164
Query: 249 VDPSSCVVVEDSTIGLAAAKAAGM 272
+++ D + A A
Sbjct: 165 FHFKKIIMIGDGATDMEACPPADA 188
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 41.6 bits (96), Expect = 6e-05
Identities = 31/248 (12%), Positives = 69/248 (27%), Gaps = 28/248 (11%)
Query: 79 ALLFDCDGVLVDTEK--DGHRISFNDTFKEKELGV-------TWDVDLYGELLKIGGGKE 129
L D DG + + F +E++L T ++ E+L +
Sbjct: 4 GYLIDLDGTIYKGKDRIPAG-EDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIK 62
Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFI---------ASLHKRKTELFMVLIEKKLLPLRPG 180
++ +R + ++ + ++ L
Sbjct: 63 TPLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDTN 122
Query: 181 V--AKLIDQALEKGVKVAVCSTSNEKAVTA--IVSFLLGPERAEKIQIFAGDVVPRKKPD 236
+ KL L T+ + + + G + + KP+
Sbjct: 123 LTYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPE 182
Query: 237 PAIYTLAASTLGVDPSSCVVVEDS-TIGLAAAKAAGMKCIVTKSSYTAEEDFLNA----D 291
I A LGV ++V D+ + A + ++ + +T E+ D
Sbjct: 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPD 242
Query: 292 AVFDCIGD 299
V + +
Sbjct: 243 FVLSSLAE 250
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 38.4 bits (88), Expect = 5e-04
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNA 290
P +KP+P + A L +D ++V D + A K AG+ A +
Sbjct: 126 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAI 185
Query: 291 DAVFD 295
+ D
Sbjct: 186 RPLRD 190
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 100.0 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.97 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.96 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.96 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.95 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.91 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.91 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.89 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.88 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.88 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.85 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.85 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.84 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.82 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.82 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.8 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.8 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.79 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.78 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.62 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.5 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.45 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.4 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.39 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.32 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.3 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.2 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.2 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.18 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.09 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.03 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.96 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.96 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.91 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.87 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.81 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.61 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.5 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.37 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.2 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.68 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.29 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.27 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.67 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 96.11 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 89.3 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 88.77 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 88.02 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 87.13 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 82.81 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 82.59 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 81.11 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 80.49 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-33 Score=232.44 Aligned_cols=209 Identities=24% Similarity=0.432 Sum_probs=160.5
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 154 (320)
.+|+||||+||||+|+.. .+..++.++++++|++...... +... .+........ ......+. .....++
T Consensus 2 ~i~a~iFD~DGTL~dt~~-~~~~a~~~~~~~~g~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~ 71 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEP-LWDRAELDVMASLGVDISRRNE-LPDT--LGLRIDMVVDLWYARQPWN------GPSRQEV 71 (218)
T ss_dssp CCCEEEECCBTTTBCCHH-HHHHHHHHHHHHTTCCGGGGGG-SCCC--TTCCHHHHHHHHHHHSCCS------SSCHHHH
T ss_pred cceEEEECCCCcccCCHH-HHHHHHHHHHHHcCCCCCHHHH-HHHH--hCCCccchhhhhhhccccc------chhHHHH
Confidence 579999999999999877 4778999999999887543222 1111 3333333333 33333332 1111222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.+.+.+...+ .+... .+++||+.++|+.|+++|++++|+||++...++..++.+++.++|+ .++++++++.+|
T Consensus 72 ~~~~~~~~~~----~~~~~-~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~--~i~~~~~~~~~K 144 (218)
T d1te2a_ 72 VERVIARAIS----LVEET-RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK 144 (218)
T ss_dssp HHHHHHHHHH----HHHHH-CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred HHHHHHHHHH----hhhcc-ccccchHHHHHHHhhhcccccccccccccccccccccccccccccc--ccccccccccch
Confidence 2222222222 22211 6779999999999999999999999999999999999999999999 899999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccc-ccCCCeeccCCCCCh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED-FLNADAVFDCIGDPP 301 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~-~~~a~~vi~~l~el~ 301 (320)
|+|++|+.+++++|++|++++||||+.+|+.+|+++|+.+|+|.++....+. ...|+++++++.||.
T Consensus 145 p~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 145 PHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp TSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred hhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 9999999999999999999999999999999999999999999877665544 367999999999985
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=1e-32 Score=231.67 Aligned_cols=220 Identities=22% Similarity=0.261 Sum_probs=164.2
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHH-HHHhhcCCCCCCCCCHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT-AYFNKTGWPEKAPSDEEERK 152 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 152 (320)
|..+|+|+||+||||+|+... +..+++++++++|.+.. ..+.+... .+....... ..+.................
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEKELTEDEFK 76 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCCC-cHHHHHHH--hhhhhhhhhhhhhhhhhhhhhhhhhHHHHH
Confidence 567899999999999998874 77889999999988743 33333332 233322211 11111100000011122111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCC
Q 020874 153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR 232 (320)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~ 232 (320)
.. ....... ..........++||+.++|+.|++.|++++++||+....++.+++.+|+..+|+ .++++++.+.
T Consensus 77 ~~----~~~~~~~-~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~ 149 (224)
T d2hsza1 77 YF----KRQFGFY-YGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPE 149 (224)
T ss_dssp HH----HHHHHHH-HHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSSS
T ss_pred HH----HHHHHHH-HHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc--cccccccccc
Confidence 11 1111111 111222346789999999999999999999999999999999999999999998 8999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhH
Q 020874 233 KKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEER 304 (320)
Q Consensus 233 ~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l 304 (320)
.||+|++|..+++++|+++++++||||+.+|+++|+++|+.+|++.+|++....+ .++|++++++.||.+.+
T Consensus 150 ~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 150 IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred ccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998876554 46999999999998764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=2.3e-33 Score=233.53 Aligned_cols=206 Identities=17% Similarity=0.227 Sum_probs=163.6
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
|.+|+|+||+||||+|+... +..+|.++++++|.+.. .+.+... .+...+.. +...+. .....+++
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~---~~~~~~------~~~~~~~~ 66 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKPFS--PAQAQKT--FPMAAEQA---MTELGI------AASEFDHF 66 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCCCC--HHHHHHH--TTSCHHHH---HHHTTC------CGGGHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hcchhhhh---hhcccc------chhhHHHH
Confidence 35899999999999998874 77899999999988743 2333222 44444433 233322 12222232
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
... ..+.+.+...+ .+++||+.++|+.|++ +++++++||+....+...++.+++..+|+ .++++++.+.+|
T Consensus 67 ~~~----~~~~~~~~~~~--~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~K 137 (207)
T d2hdoa1 67 QAQ----YEDVMASHYDQ--IELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK 137 (207)
T ss_dssp HHH----HHHHHTTCGGG--CEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred HHH----hhhhhcccccc--cccccchhhhhhhhcc-ccccccccccccccccccccccccccccc--ccccccccccch
Confidence 222 22333332222 6789999999999975 69999999999999999999999989998 889999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEE 303 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~ 303 (320)
|+|++|+.+++++|++|++++||||+.+|+++|+++||.+|++.+|+....++..++++++++.|+.+.
T Consensus 138 P~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 138 PDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred hhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 999999999999999999999999999999999999999999999999988888999999998887653
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=1e-32 Score=237.17 Aligned_cols=215 Identities=17% Similarity=0.208 Sum_probs=159.5
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHH--------------HHHHHHhhcCCC
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE--------------RMTAYFNKTGWP 141 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~ 141 (320)
++|+|+||+||||+|+.......++.++++++|+..+ .+.+... .|.... .+...+...
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 73 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT--AEEARKP--MGLLKIDHVRALTEMPRIASEWNRVFRQL--- 73 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHHHSHHHHHHHHHHHSSC---
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCC--HHHHHHH--hCCcHHHHHHHHhhhhhhhHHHHHHhccc---
Confidence 4789999999999998765457789999999987754 2222211 221111 111111111
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccc
Q 020874 142 EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~ 221 (320)
............ ..+.+.+.+.. ...++||+.++|+.|+++|++++|+||++...++..++.+++..+|..
T Consensus 74 ----~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d 144 (257)
T d1swva_ 74 ----PTEADIQEMYEE----FEEILFAILPR-YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD 144 (257)
T ss_dssp ----CCHHHHHHHHHH----HHHHHHHHGGG-GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS
T ss_pred ----CCHHHHHHHHHH----HHHHHHHHhhc-cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc
Confidence 122333333222 22333333222 367899999999999999999999999999999999999988887732
Q ss_pred eeEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc---------------
Q 020874 222 IQIFAGDVVPRKKPDPAIYTLAASTLGVDP-SSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE--------------- 285 (320)
Q Consensus 222 ~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~-~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~--------------- 285 (320)
.++++++++.+||+|++|..+++++|+.| ++||||||+.+|+.+|+++||.+|+|.+|++...
T Consensus 145 -~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~ 223 (257)
T d1swva_ 145 -FLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 223 (257)
T ss_dssp -CCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHH
T ss_pred -cccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHH
Confidence 67888999999999999999999999965 8999999999999999999999999999975321
Q ss_pred --------cc--cCCCeeccCCCCChhhHHhh
Q 020874 286 --------DF--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 286 --------~~--~~a~~vi~~l~el~~~l~~~ 307 (320)
.+ .+||++|+++.||+..|.++
T Consensus 224 ~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 224 EKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 01 24999999999999987654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=4.5e-31 Score=222.71 Aligned_cols=219 Identities=16% Similarity=0.152 Sum_probs=164.6
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHc-CCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
.|+|+||+||||+|+... +..++.+++.+. +.........+. .........+++...++ ......+.+
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~~~~~~ 70 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDFS----GKMDGAIIYEVLSNVGL------ERAEIADKF 70 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CCT----TCCHHHHHHHHHHTTTC------CHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCccHHHHHHh----cCchHHHHHHHHHHhCC------ChHHHHHHH
Confidence 379999999999999984 677788877764 443222111110 11122334445555433 233333333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcC-CeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G-~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
..+.+.....+.+........++||+.++|+.|+++| ++++++||++...+...++.+++..+|+ .++++++....|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~k 148 (228)
T d2hcfa1 71 DKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDALDRN 148 (228)
T ss_dssp HHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCSSGG
T ss_pred HHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc--cccccccccccc
Confidence 3444444444444433344678999999999999987 8999999999999999999999999999 888999989999
Q ss_pred CCHHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhHHhhh
Q 020874 235 PDPAIYTLAASTL---GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 235 P~~~~~~~~~~~~---g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l~~~~ 308 (320)
|+|..+...++.+ |++|+++|||||+.+|+.+|+++||.+|+|.+|....+++ .+||++++++.||.+.|..++
T Consensus 149 ~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 149 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred chhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 9999877766665 7899999999999999999999999999999998887765 369999999999999988775
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=1.9e-30 Score=215.08 Aligned_cols=199 Identities=16% Similarity=0.199 Sum_probs=148.3
Q ss_pred eEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHH-HHHHHhhcCCCCCCCCCHHHHHHHHH
Q 020874 78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQFIA 156 (320)
Q Consensus 78 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
++++||+||||+|+... +..+|+++++++|++.. .+...... .+..... +..++...+. ..+...+..
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~- 70 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPYD--KEKVREFI-FKYSVQDLLVRVAEDRNL------DVEVLNQVR- 70 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCCC--HHHHHHHH-HHSCHHHHHHHHHHHHTC------CHHHHHHHH-
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC--HHHHHHhh-cccccccccccccchhhh------hHHHHHHHH-
Confidence 58999999999998874 67789999999988754 23333222 2223222 3333332211 122111111
Q ss_pred HHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCC
Q 020874 157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD 236 (320)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~ 236 (320)
...+.+. .....++||+.++|+.|+++|++++|+||+... +..+++++++..+|+ .++++++++.+||+
T Consensus 71 ------~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~--~i~~s~~~~~~Kp~ 139 (204)
T d2go7a1 71 ------AQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFT--EILTSQSGFVRKPS 139 (204)
T ss_dssp ------HHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEE--EEECGGGCCCCTTS
T ss_pred ------HHHHHhh--cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhcccccccc--cccccccccccchh
Confidence 1111111 122678999999999999999999999998764 567899999999998 89999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhH
Q 020874 237 PAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEER 304 (320)
Q Consensus 237 ~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l 304 (320)
|++|+.+++++|++|++++||||+.+|+.+|+++||++|++.++.. .+++.++++.|+.+.+
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADISRIF 201 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999987643 4667778877776543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=1.3e-30 Score=216.90 Aligned_cols=207 Identities=15% Similarity=0.187 Sum_probs=158.3
Q ss_pred CCCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 020874 74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ 153 (320)
Q Consensus 74 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (320)
|..+|+|+||+||||+|+... +..++.++++++|++.. +.+.++.. .+...... +... .......+
T Consensus 1 M~~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~---~~~~-------~~~~~~~~ 66 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLESS---FATC-------LSKDQISE 66 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHHH---HHTT-------SCGGGHHH
T ss_pred CCCCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHh--hhcchhhh---cccc-------ccchhhHH
Confidence 567899999999999998874 77889999999988743 33333332 34433332 2221 11222333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
....+....... . .....++||+.++|+.|+.+ ++++++||++...++..++++++..+|+ .++++++. +
T Consensus 67 ~~~~~~~~~~~~----~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd--~v~~~~~~--~ 136 (210)
T d2ah5a1 67 AVQIYRSYYKAK----G-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPE--A 136 (210)
T ss_dssp HHHHHHHHHHHT----G-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECSS--C
T ss_pred HHHHHHHHHHhh----h-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccc--cccccccc--c
Confidence 333322221111 1 12367899999999999877 5899999999999999999999999998 77777764 6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc--cCCCeeccCCCCChhhH
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF--LNADAVFDCIGDPPEER 304 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~--~~a~~vi~~l~el~~~l 304 (320)
||+|++|..+++++|++|+++|||||+.+|+.+|+++|+++|+|.+|....+.+ .+||++++++.|+.+.|
T Consensus 137 ~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred cccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 888899999999999999999999999999999999999999999998877766 35999999999987754
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.97 E-value=8.7e-30 Score=215.09 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=120.7
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++ |++++++||++...+..+++.+++..+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 99 ~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~ 175 (230)
T d1x42a1 99 GELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFD--SITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (230)
T ss_dssp CCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccc--cccccccccccchhhHHHHHHHhhhccccccc
Confidence 6789999999999974 79999999999999999999999999999 89999999999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
+||||+. +|+++|+++|+++|++.++........++|++++++.|+.+.|.++
T Consensus 176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp EEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred ceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 9999996 7999999999999999988777777778999999999998887764
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=2.8e-29 Score=210.45 Aligned_cols=213 Identities=23% Similarity=0.269 Sum_probs=154.7
Q ss_pred CceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHH-HHHhhcCCCCCCCCCHHHHHHH
Q 020874 76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT-AYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 76 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
|+|+|+||+||||+|+.. .+..++.+++.++|++... ..+...+ .+.+..... .++...+. ....+...++
T Consensus 1 MikaiiFD~DGTL~ds~~-~~~~a~~~~~~~~g~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 72 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAE-YHFRAWKALAEEIGINGVD--RQFNEQL-KGVSREDSLQKILDLADK----KVSAEEFKEL 72 (221)
T ss_dssp CCCEEEECCBTTTBTHHH-HHHHHHHHHHHHTTCCCCC--HHHHTTT-TTCCHHHHHHHHHTTSSS----CCCHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHH-HHHHHHHHHHHHcCCCCCh--HHHHHHH-hhccchhhhhhccccccc----cchhhhhhhH
Confidence 689999999999999876 4778999999999887542 2222111 233333333 33332221 2334444444
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK 233 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~ 233 (320)
... ..+.+.+.+.. ....++||+.++|+.|++.|++++++||... ....++.+++..+|+ .++++++.+.+
T Consensus 73 ~~~----~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~--~i~~~~~~~~~ 144 (221)
T d1o08a_ 73 AKR----KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD--AIADPAEVAAS 144 (221)
T ss_dssp HHH----HHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS--EECCTTTSSSC
T ss_pred HHH----HHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc--ccccccccccc
Confidence 333 33334433332 1256899999999999999999999999754 578889999999998 78899999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC-hhhHHhhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP-PEERFDLA 308 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el-~~~l~~~~ 308 (320)
||+|++|+.+++++|++|++||||||+.+|+++|+++||++|+|.++. ....++.+++++.++ .+.|.++.
T Consensus 145 KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~----~~~~~~~~~~~~~~~~~~~l~el~ 216 (221)
T d1o08a_ 145 KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE----DLGDDIVIVPDTSHYTLEFLKEVW 216 (221)
T ss_dssp TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH----HHCSSSEEESSGGGCCHHHHHHHH
T ss_pred ccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh----hcccccEEcCCcccCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999997642 233455566666664 34444443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2e-28 Score=208.69 Aligned_cols=130 Identities=17% Similarity=0.263 Sum_probs=114.4
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|++ |++++++||++...+...++.+|+..+|+ .++++++++.+||+|++|+.+++++|++|+++
T Consensus 108 ~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~ 184 (247)
T d2gfha1 108 MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 184 (247)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccc--ccccccccccchhhhhhHHHHHHHhhcCHHhc
Confidence 7889999999999985 79999999999999999999999999998 88999999999999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEE-EEcCCCCCc-ccccCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDST-IGLAAAKAAGMKCI-VTKSSYTAE-EDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~-~Di~~A~~aG~~~v-~v~~g~~~~-~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
|||||+. +|+.+|+++|++++ +++.+.... .....++++++++.||.+.|.++
T Consensus 185 l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~i 240 (247)
T d2gfha1 185 VMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSI 240 (247)
T ss_dssp EEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHHH
T ss_pred ceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHHH
Confidence 9999997 79999999999855 454443332 23356999999999998877664
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=4.5e-29 Score=209.29 Aligned_cols=210 Identities=24% Similarity=0.319 Sum_probs=155.7
Q ss_pred ceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHH-HHhhcCCCCCCCCCHHHHHHHH
Q 020874 77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNKTGWPEKAPSDEEERKQFI 155 (320)
Q Consensus 77 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (320)
+|+||||+||||+|++. .+..+|+++++++|++.+ .+.+...+ .|.....+.. ++...+.. ...+...+..
T Consensus 2 ~kaviFD~DGtL~dt~~-~~~~a~~~~~~~~g~~~~--~~~~~~~~-~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 73 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEI-IAAQVESRLLTEAGYPIS--VEEMGERF-AGMTWKNILLQVESEASIP----LSASLLDKSE 73 (222)
T ss_dssp CSEEEECSBTTTBCCHH-HHHHHHHHHHHHTTCCCC--HHHHHHHH-TTCCHHHHHHHHHHHHCCC----CCTHHHHHHH
T ss_pred ceEEEECCCCcccCCHH-HHHHHHHHHHHHcCCCCC--HHHHHHHH-hhhcccccccccccccccc----ccccchhHHH
Confidence 68999999999999987 478899999999988754 33333222 3444444333 33333332 2233333222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC--CCCC
Q 020874 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRK 233 (320)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~--~~~~ 233 (320)
..+.. . ... ...++||+.++|+.|+. +.+++||.....+...++++++..+|+. .++++++ ....
T Consensus 74 ~~~~~----~----~~~-~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~~~~~ 140 (222)
T d2fdra1 74 KLLDM----R----LER-DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLGADRV 140 (222)
T ss_dssp HHHHH----H----HHH-HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHCTTCC
T ss_pred HHHHH----H----hhh-ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccce-eeccccccccccc
Confidence 22211 1 111 17889999999988754 5679999999999999999999999985 3444443 4678
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCccc----c--cCCCeeccCCCCChhhHHhh
Q 020874 234 KPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEED----F--LNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 234 KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~----~--~~a~~vi~~l~el~~~l~~~ 307 (320)
||+|++|..+++++|++|++++||||+..|+++|+++||.+|++.++...... + .+|+++|+++.||+..|..+
T Consensus 141 KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l 220 (222)
T d2fdra1 141 KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAM 220 (222)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHH
T ss_pred ccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988754322 2 36999999999998877654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.96 E-value=1.8e-29 Score=211.29 Aligned_cols=126 Identities=21% Similarity=0.269 Sum_probs=116.1
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++|++.++++.|++.|++++++||+....+...++.++...+|+ .++++++++..||+|++|+.+++++|++|+++
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd--~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~ 169 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 169 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc--ceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence 6789999999999999999999999999999999999998888998 89999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCeeccCCCCChh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAVFDCIGDPPE 302 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~vi~~l~el~~ 302 (320)
+||||+..|+.+|+++|+++||++++....+.. ..||++|+++.||.+
T Consensus 170 l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 170 LFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred EEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHh
Confidence 999999999999999999999998776655444 568999999888765
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=3.4e-28 Score=198.84 Aligned_cols=180 Identities=18% Similarity=0.205 Sum_probs=135.8
Q ss_pred CCceEEEEeCCCccccCCccchHHHHHHHHHHcCCCCCCchhHHHHHHHhcCcHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 020874 75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF 154 (320)
Q Consensus 75 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (320)
|++|+||||+||||+|+... +..+|.++++.+|+... .+.+.... +.......+.+... .+ .+
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~--~~~~~~~~~~~~~~--------~~----~~ 63 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQAL--KVSTPFAIETFAPN--------LE----NF 63 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHHH--HHCHHHHHHHHCTT--------CT----TH
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCCcc--HHHHHhhh--hccchhhhhhhhHH--------HH----HH
Confidence 46899999999999998774 77889999999887643 33333332 22233332322211 11 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCC
Q 020874 155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~K 234 (320)
.+.+ .+.+.+.+. ...++||+.++|+.|+++|++++++||.+.... ..++.+++..+|+ .++++++++..|
T Consensus 64 ~~~~----~~~~~~~~~--~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd--~i~~~~~~~~~K 134 (187)
T d2fi1a1 64 LEKY----KENEARELE--HPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFT--EVVTSSSGFKRK 134 (187)
T ss_dssp HHHH----HHHHHHHTT--SCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEE--EEECGGGCCCCT
T ss_pred HHHH----HHHHHHHhh--cCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccc--cccccccccccC
Confidence 1222 222222222 268899999999999999999999999887655 5789999999998 899999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
|+|++|+.+++++|++ ++|||||+..|+++|+++|+++|+++++.+
T Consensus 135 P~p~~~~~~~~~~~~~--~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~ 180 (187)
T d2fi1a1 135 PNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVN 180 (187)
T ss_dssp TSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCHHHHHHHHHHcCCC--CeEEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999874 599999999999999999999999876543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.95 E-value=1e-28 Score=209.99 Aligned_cols=129 Identities=22% Similarity=0.271 Sum_probs=114.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++|++.++|+.|+ ++.++++||++...+...++.++...+|+ .++++++++..||+|++|+.+++++|+.|+++
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd--~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~ 167 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc--cccccccccccCccHHHHHHHHHHhCCChhhE
Confidence 688999999999885 68999999999999999999999999998 89999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCc-----------------------cc-ccCCCeeccCCCCChhhHHhh
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAE-----------------------ED-FLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~-----------------------~~-~~~a~~vi~~l~el~~~l~~~ 307 (320)
|||||+.+|+.+|+++||++|||++..... +. ...+|++++++.||++.+..+
T Consensus 168 l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 168 LFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp EEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 999999999999999999999997543110 11 135999999999999988754
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.8e-27 Score=202.09 Aligned_cols=125 Identities=17% Similarity=0.142 Sum_probs=108.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
..++||+.++|+.|+++|++++++||++...+...++.++...+++... ...+.....||+|.+|+.+++++|++|+++
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD-GHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS-EEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcc-eeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence 5689999999999999999999999999999999999988888877432 233556779999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEcCCCCCc--ccccCCCeeccCCCCC
Q 020874 255 VVVEDSTIGLAAAKAAGMKCIVTKSSYTAE--EDFLNADAVFDCIGDP 300 (320)
Q Consensus 255 v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~--~~~~~a~~vi~~l~el 300 (320)
+||||+.+|+.+|+++||++|||.+..... +....++.+|++|.||
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 999999999999999999999997654432 2335688899999987
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.3e-24 Score=179.61 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=91.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchH----HHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK----AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~----~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..++||+.++|+.|+++|++++++||.... .........+...+|+ .++++++++.+||+|++|+++++++|++
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd--~i~~s~~~~~~KP~~~~~~~~~~~~~~~ 175 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIYKFLLDTLKAS 175 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhcc--EEEeccccccchhHHHHHHHHhhhcccC
Confidence 678999999999999999999999986443 2333334445667888 8899999999999999999999999999
Q ss_pred CCcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
|++++||||+..|+++|+++||++|+|.++.
T Consensus 176 p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 176 PSEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred ccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 9999999999999999999999999987654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.91 E-value=1.6e-25 Score=187.15 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCC----chHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~----~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..++||+.++|+.|+++|++++++||+ ........+..+++..+|+ .++++++++.+||+|++|+.+++++|++
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd--~i~~s~~~~~~KP~p~~~~~~~~~~~v~ 173 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD--FLIESCQVGMIKPEPQIYNFLLDTLKAK 173 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS--EEEEHHHHSCCTTCHHHHHHHHHHHTSC
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc--eeeehhhccCCCCChHHHHHHHHHhCCC
Confidence 678999999999999999999999974 3334555666777888999 8999999999999999999999999999
Q ss_pred CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcc
Q 020874 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEE 285 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~ 285 (320)
|+++|||||+..|+++|+++||++|+|.++....+
T Consensus 174 p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~ 208 (222)
T d1cr6a1 174 PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALR 208 (222)
T ss_dssp TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHH
T ss_pred cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHH
Confidence 99999999999999999999999999987655443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=6.4e-24 Score=169.51 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=89.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch-HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE-KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSS 253 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~-~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~ 253 (320)
..+|||+.++|+.|+++|++++++||++. ......++.++...++. .+. ...||+|+.|..+++++|++|++
T Consensus 45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~~-----~~~kp~~~~~~~~~~~~~~~~~~ 117 (164)
T d1u7pa_ 45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QRE-----IYPGSKVTHFERLHHKTGVPFSQ 117 (164)
T ss_dssp ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EEE-----ESSSCHHHHHHHHHHHHCCCGGG
T ss_pred cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--eee-----cccCCChHHHHHHHHHhCCChHH
Confidence 68899999999999999999999998776 44566778877776666 343 23689999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEcCCCCCc
Q 020874 254 CVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE 284 (320)
Q Consensus 254 ~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~ 284 (320)
++||||+..|+++|+++|+.+|+|.+|++..
T Consensus 118 ~l~igD~~~di~aA~~aG~~~i~v~~G~~~~ 148 (164)
T d1u7pa_ 118 MVFFDDENRNIIDVGRLGVTCIHIRDGMSLQ 148 (164)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSCCCHH
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCChH
Confidence 9999999999999999999999999987543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=8e-23 Score=170.48 Aligned_cols=119 Identities=17% Similarity=0.167 Sum_probs=93.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHH-----------HHHhcCcccccceeEEeCCCCCCCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI-----------VSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~-----------l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~ 243 (320)
..+++++.+++. .+..+++.++......... ++.+++..+|+ .+++++.. ..||+|++|+.+
T Consensus 96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd--~v~~~~~~-~~KP~p~~f~~~ 168 (225)
T d2g80a1 96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINTS-GKKTETQSYANI 168 (225)
T ss_dssp BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHHH-CCTTCHHHHHHH
T ss_pred ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccc--eeeecccc-CCCCChhHhHHH
Confidence 346777777664 4567788888766544433 34456667787 77777654 479999999999
Q ss_pred HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCC
Q 020874 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDP 300 (320)
Q Consensus 244 ~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el 300 (320)
++++|+.|++|+||||+.+|+.+|+++||++|||.+.........+++.+|++|+||
T Consensus 169 ~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 169 LRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred HHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 999999999999999999999999999999999986554444445677789999986
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=2.8e-23 Score=169.03 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=95.6
Q ss_pred cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh-cCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020874 173 KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 173 ~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~-~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
....+++|+.+++..++..|++++++||+........+..+ ++..+|+ .++++++.+.+||+|++|+.+++++|++|
T Consensus 81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~ 158 (197)
T d2b0ca1 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIYQHVLQAEGFSP 158 (197)
T ss_dssp CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhcc--ceeecccccccccchHHHHHHHHhcCCCC
Confidence 33578999999999999999999999998877666666665 5667888 78888888999999999999999999999
Q ss_pred CcEEEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 252 SSCVVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 252 ~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++++||||+.+|+++|+++|+++|+|+...
T Consensus 159 ~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 159 SDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred CeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 999999999999999999999999987654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=1.9e-22 Score=163.65 Aligned_cols=129 Identities=17% Similarity=0.206 Sum_probs=100.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC-----------C
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D 228 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~-----------d 228 (320)
+.++||+.++|+.|+++|++++++||.+. ..+...+...+. .... ..++. +
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~cp~~p~~~~~~~~~ 102 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV-DLDG--IYYCPHHPQGSVEEFRQ 102 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC-CCSE--EEEECCBTTCSSGGGBS
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcc-cccc--eeecccccccccccccc
Confidence 57889999999999999999999999753 112223333322 2221 23332 2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEcCCCCCcccc-cCCCeeccCCCCChhhHHh
Q 020874 229 VVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKC-IVTKSSYTAEEDF-LNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 229 ~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~-v~v~~g~~~~~~~-~~a~~vi~~l~el~~~l~~ 306 (320)
+...+||+|.++..+++++|+++++++||||+.+|+++|++||+.+ +++.+|+...+.. ..||++++++.|+.+.|.+
T Consensus 103 ~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ikk 182 (182)
T d2gmwa1 103 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKK 182 (182)
T ss_dssp CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHHHC
T ss_pred cccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHhcC
Confidence 3456899999999999999999999999999999999999999965 7788777665554 4599999999999987753
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=1.7e-22 Score=182.26 Aligned_cols=133 Identities=20% Similarity=0.136 Sum_probs=115.7
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC-----------CCCCCCCHHHHHHHH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-----------VPRKKPDPAIYTLAA 244 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~-----------~~~~KP~~~~~~~~~ 244 (320)
.++||+.++|+.|+++|++++++||.+...+...++++|+..+|+...++++++ .+..||+|+.|..++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 367799999999999999999999999999999999999999998666776543 367899999999988
Q ss_pred HHc--------------CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-----cCCCeeccCCCCChhhHH
Q 020874 245 STL--------------GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-----LNADAVFDCIGDPPEERF 305 (320)
Q Consensus 245 ~~~--------------g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-----~~a~~vi~~l~el~~~l~ 305 (320)
..+ +..+++|+||||+.+|+.+|+++|+.+|+|.+|....+.. .+||++++++.|+...|.
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~ 374 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHH
Confidence 654 5678899999999999999999999999999998765432 379999999999998887
Q ss_pred hhh
Q 020874 306 DLA 308 (320)
Q Consensus 306 ~~~ 308 (320)
+++
T Consensus 375 ~l~ 377 (380)
T d1qyia_ 375 NLL 377 (380)
T ss_dssp CTT
T ss_pred HHH
Confidence 765
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=5.8e-22 Score=156.87 Aligned_cols=105 Identities=14% Similarity=0.212 Sum_probs=79.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---------------hHHHHHHHHHhcCcccccceeEE----eCCCCCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKP 235 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---------------~~~~~~~l~~~~~~~~~~~~~i~----~~d~~~~~KP 235 (320)
+.++||+.++|+.|+++|++++++||.+ ...+...+...+.. ++. ..+ ..++...+||
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~-i~~~~~~~~~~~~~~KP 105 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDE-VLICPHLPADECDCRKP 105 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEE-EEEECCCGGGCCSSSTT
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cce-eeecccccccccccccc
Confidence 6789999999999999999999999964 12233444444332 221 122 3355677899
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCC
Q 020874 236 DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYT 282 (320)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~ 282 (320)
+|.+++++++++|++|++++||||+..|+++|+++||+++++..++.
T Consensus 106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~~ 152 (161)
T d2fpwa1 106 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL 152 (161)
T ss_dssp SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCCC
Confidence 99999999999999999999999999999999999999999976654
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=7.7e-22 Score=165.17 Aligned_cols=131 Identities=12% Similarity=0.026 Sum_probs=100.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEe-CC----------CCCCCCCCHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA-GD----------VVPRKKPDPAIYTLA 243 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~-~d----------~~~~~KP~~~~~~~~ 243 (320)
.+++||+.++++.|+++|++++++||+....++.+++++++.+++....... .+ .....++++.....+
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence 7899999999999999999999999999999999999987766653222221 11 112467788889999
Q ss_pred HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCc-ccc-cCCCeeccCCCCChhhHHhhh
Q 020874 244 ASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAE-EDF-LNADAVFDCIGDPPEERFDLA 308 (320)
Q Consensus 244 ~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~-~~~-~~a~~vi~~l~el~~~l~~~~ 308 (320)
++++++++++++||||+.+|+.||++||+.++. ++... ... ..+...++++.|+...+.++.
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~---~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR---DYLLNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC---HHHHHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred HHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe---cchHHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 999999999999999999999999999975543 22111 111 234567888888888777665
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.84 E-value=7.1e-21 Score=157.02 Aligned_cols=125 Identities=22% Similarity=0.243 Sum_probs=90.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCch---------------HHHHHHHHHhcCcccccceeEEeC------------
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG------------ 227 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~---------------~~~~~~l~~~~~~~~~~~~~i~~~------------ 227 (320)
+.++||+.++|+.|+++|++++++||.+. ..+...++..+. +++ .++..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~--~~~~~~~~~~~~~~~~~ 122 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVD--MVLACAYHEAGVGPLAI 122 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCS--EEEEECCCTTCCSTTCC
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccc--eEEEecccccccccccc
Confidence 57899999999999999999999999541 122333443322 122 22211
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHhh
Q 020874 228 DVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFDL 307 (320)
Q Consensus 228 d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~~ 307 (320)
.+...+||+|.++..+++++|+++++++||||+.+|+++|++|||+++++.+|+... ..+..+.++.++.+ +.++
T Consensus 123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~----~~~~~~~~~~~~~e-~~dl 197 (209)
T d2o2xa1 123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV----QPGFAIRPLRDSSE-LGDL 197 (209)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE----ETTEEEEEESSHHH-HHHH
T ss_pred cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc----cCCccccCccchhH-HHHH
Confidence 122357999999999999999999999999999999999999999999998876543 24555555555543 4444
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 198 l 198 (209)
T d2o2xa1 198 L 198 (209)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2.9e-22 Score=170.73 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=67.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCCh
Q 020874 227 GDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPP 301 (320)
Q Consensus 227 ~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~ 301 (320)
.+....+||+|.+|+.+++++|++|++++||||++ +||.+|+++||++|+|.+|....+.+. .||++++++.||+
T Consensus 169 ~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 169 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred ccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 34456789999999999999999999999999998 599999999999999999988777663 4799999999986
Q ss_pred h
Q 020874 302 E 302 (320)
Q Consensus 302 ~ 302 (320)
.
T Consensus 249 ~ 249 (250)
T d2c4na1 249 V 249 (250)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.4e-20 Score=156.70 Aligned_cols=126 Identities=15% Similarity=0.149 Sum_probs=87.6
Q ss_pred cCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCccccc---ceeEE-eCCCCC--------CCCCCHHHH
Q 020874 173 KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE---KIQIF-AGDVVP--------RKKPDPAIY 240 (320)
Q Consensus 173 ~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~---~~~i~-~~d~~~--------~~KP~~~~~ 240 (320)
....++||+.++++.|+++|++++|+|++....++.+++.+|+..... ...+. .+...+ ..+.+.+..
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v 158 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 158 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHH
Confidence 447789999999999999999999999999999999999997653210 00111 011111 122244556
Q ss_pred HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCCh
Q 020874 241 TLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPP 301 (320)
Q Consensus 241 ~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~ 301 (320)
+.+++. .+++++++|||+.+|+.|++.+|+..++ +...........+++++.++.||.
T Consensus 159 ~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va~-~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 159 KLLKEK--FHFKKIIMIGDGATDMEACPPADAFIGF-GGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEEE-CSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHhc--cCccccEEEEeCHhhHHHHHhCCceEEE-CCCHHHHHHHHhCCCEeCCHHHhc
Confidence 655554 4578999999999999999999986544 211111222356999999988763
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.80 E-value=2.8e-19 Score=146.87 Aligned_cols=117 Identities=21% Similarity=0.134 Sum_probs=96.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC----------CCCCCCCCCHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG----------DVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~----------d~~~~~KP~~~~~~~~~ 244 (320)
..+++|+.++++.++.+|..++++|+..........+.++....+. ..+.. .....+++++..+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA--NRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh--hhhccccccccccccccccccccccchhhhHH
Confidence 6889999999999999999999999999988888888886665544 22221 22346778899999999
Q ss_pred HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCC
Q 020874 245 STLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCI 297 (320)
Q Consensus 245 ~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l 297 (320)
+++++.++++++|||+.||+.|++.||+..++ +..+...+.|++++++.
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~----na~~~lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF----CAKPILKEKADICIEKR 200 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE----SCCHHHHTTCSEEECSS
T ss_pred HHhcccccceEEecCCcChHHHHHHCCCCEEE----CCCHHHHHhCCEEEcCC
Confidence 99999999999999999999999999987654 23445557899999864
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.80 E-value=7.9e-20 Score=156.38 Aligned_cols=74 Identities=24% Similarity=0.383 Sum_probs=66.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCChhhH
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPPEER 304 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~~~l 304 (320)
..+||+|.+|..+++++|++|++++||||++ +||.+|+++||++|||.+|....+... .||++++++.||.+.|
T Consensus 182 ~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 182 IAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp ECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred ccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 3579999999999999999999999999997 699999999999999999987765542 4799999999988765
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.79 E-value=4.5e-19 Score=150.95 Aligned_cols=71 Identities=20% Similarity=0.319 Sum_probs=63.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEcCCCCCcccc----cCCCeeccCCCCCh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDST-IGLAAAKAAGMKCIVTKSSYTAEEDF----LNADAVFDCIGDPP 301 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~~aG~~~v~v~~g~~~~~~~----~~a~~vi~~l~el~ 301 (320)
..+||+|.+|+++++++|++|++++||||++ +|+++|+++||++|+|.+|....+.. ..||++++++.|+.
T Consensus 177 ~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 177 YIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp ECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred eecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 4589999999999999999999999999997 59999999999999999987655433 34799999999874
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.78 E-value=5e-21 Score=163.27 Aligned_cols=71 Identities=20% Similarity=0.338 Sum_probs=63.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEcCCCCCccccc----CCCeeccCCCCCh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTI-GLAAAKAAGMKCIVTKSSYTAEEDFL----NADAVFDCIGDPP 301 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~-Di~~A~~aG~~~v~v~~g~~~~~~~~----~a~~vi~~l~el~ 301 (320)
..+||+|.+|+.+++++|++|++++||||++. ||.+|+++||++|+|.+|....++.. .||++++++.|+.
T Consensus 177 ~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 177 IIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred EeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 45699999999999999999999999999985 99999999999999999977665542 3799999999873
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.67 E-value=7.3e-16 Score=119.89 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=75.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHH---HHHHHHHhc------CcccccceeEEeCCCCCCCCCCHHHHHHHHH
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLL------GPERAEKIQIFAGDVVPRKKPDPAIYTLAAS 245 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~---~~~~l~~~~------~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~ 245 (320)
..++||+.++|+.|+++|++|+++||.+... +...|+... ....++ ...... ....+|+.......+.
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~d~~~k~~~l~ 111 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV--MQCQRE-QGDTRKDDVVKEEIFW 111 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS--EEEECC-TTCCSCHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEE--Eeeccc-ccccCCchHHHHHHHH
Confidence 5779999999999999999999999976321 222232211 111122 333333 3556778888888888
Q ss_pred HcCCCCCcE-EEEecCHhhHHHHHHcCCeEEEEcCCC
Q 020874 246 TLGVDPSSC-VVVEDSTIGLAAAKAAGMKCIVTKSSY 281 (320)
Q Consensus 246 ~~g~~~~~~-v~VGDs~~Di~~A~~aG~~~v~v~~g~ 281 (320)
++..+..++ ++|||+..|+++|+++|++++.|.+|+
T Consensus 112 ~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 112 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred HhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 877776665 578999999999999999999999885
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=3.9e-16 Score=127.40 Aligned_cols=129 Identities=11% Similarity=-0.031 Sum_probs=92.6
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCC--CCCCCCCHHHHHHHHHHcCCCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDPAIYTLAASTLGVDPS 252 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~--~~~~KP~~~~~~~~~~~~g~~~~ 252 (320)
....++....+..++ .+++.++++++...........++..........+.... .....+++...+..++++|++++
T Consensus 68 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 146 (206)
T d1rkua_ 68 LKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp CCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred ccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhccccc
Confidence 678899988888775 579999999998888888888876554443211121111 11233445566778899999999
Q ss_pred cEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccc-cCCCee-ccCCCCChhhHHhhh
Q 020874 253 SCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDF-LNADAV-FDCIGDPPEERFDLA 308 (320)
Q Consensus 253 ~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~-~~a~~v-i~~l~el~~~l~~~~ 308 (320)
++++|||+.||+.|.+.||+..++ + ..++.. +.++++ ..+.+|+.+.|++..
T Consensus 147 eviaiGDg~NDi~Ml~~Ag~gIAm---n-a~~~v~~~~~~~~~~~~~~d~~~~~~~~~ 200 (206)
T d1rkua_ 147 RVIAAGDSYNDTTMLSEAHAGILF---H-APENVIREFPQFPAVHTYEDLKREFLKAS 200 (206)
T ss_dssp EEEEEECSSTTHHHHHHSSEEEEE---S-CCHHHHHHCTTSCEECSHHHHHHHHHHHC
T ss_pred ceEEecCCccCHHHHHhCCccEEE---C-CCHHHHHhCCCceeecCHHHHHHHHHHHh
Confidence 999999999999999999987776 2 233333 567875 577888887776543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.50 E-value=1.7e-14 Score=119.61 Aligned_cols=112 Identities=22% Similarity=0.103 Sum_probs=75.1
Q ss_pred CeEEEEcC-CchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 020874 193 VKVAVCST-SNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAG 271 (320)
Q Consensus 193 ~~i~lvT~-~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG 271 (320)
..+.+... .....+...++.++....+.. .-..-+..+.+.+++..++.+++++|++++++++|||+.||+.|++.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag 188 (230)
T d1wr8a_ 110 AGLVIMRETINVETVREIINELNLNLVAVD-SGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVG 188 (230)
T ss_dssp SCEEECTTTSCHHHHHHHHHHTTCSCEEEE-CSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSS
T ss_pred eeEEEecccccHHHHHHHHHHhccceEEee-CCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCC
Confidence 34444333 234455666666633211110 0011133467889999999999999999999999999999999999999
Q ss_pred CeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhh
Q 020874 272 MKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLA 308 (320)
Q Consensus 272 ~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~ 308 (320)
+..++ ++.++...+.|++++++..+ +.+.+.+++
T Consensus 189 ~~vav---~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 189 YKVAV---AQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp EEEEC---TTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred eEEEE---CCCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 76554 66666667889999876432 444554444
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.45 E-value=1.3e-13 Score=114.44 Aligned_cols=65 Identities=12% Similarity=0.022 Sum_probs=54.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
.+..+...++++++++|++++++++|||+.||+.|++.+|...++ ++..+..++.||++++.-.+
T Consensus 148 ~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav---~na~~~~k~~ad~v~~~~~~ 212 (225)
T d1l6ra_ 148 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP---ANATDNIKAVSDFVSDYSYG 212 (225)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC---TTSCHHHHHHCSEECSCCTT
T ss_pred CccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE---CCCcHHHHHhCCEEECCCCc
Confidence 445668899999999999999999999999999999999976554 56666666789998876653
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=3.3e-13 Score=114.82 Aligned_cols=72 Identities=15% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhhh
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLAF 309 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~~ 309 (320)
-|..+++.+++.++++++++++|||+.||+.|.+.+|...++ ++...+.+..|++++++..+ +.+.|.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am---~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV---DNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCTTTTHHHHHHHHHTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCcChHHHHHHHHhC
Confidence 467889999999999999999999999999999999977766 67777777889999998877 6677777665
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.40 E-value=5.8e-12 Score=107.69 Aligned_cols=66 Identities=23% Similarity=0.118 Sum_probs=56.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
+.+--|..+++++++.+|++++++++|||+.||+.|.+.+|..+++ ++..++.++.|++++++.++
T Consensus 209 ~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam---~na~~~~k~~A~~v~~~~~~ 274 (285)
T d1nrwa_ 209 SRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM---GNAREDIKSIADAVTLTNDE 274 (285)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC---TTCCHHHHHHCSEECCCGGG
T ss_pred cccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe---CCCCHHHHHhCCEEcCCCCc
Confidence 4455679999999999999999999999999999999999977766 67777777889999887554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.39 E-value=2.4e-13 Score=115.70 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=63.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
.+.+--|...++.+++++|++++++++|||+.||+.|.+.+|..+++ ++..++.++.|++++.+.+| +.+.|.++
T Consensus 185 ~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~---~na~~~~k~~A~~i~~~~~~~Gva~~i~~l 261 (267)
T d1nf2a_ 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (267)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred cCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCccHHHHHHHHH
Confidence 34556679999999999999999999999999999999999977665 77777778899999998877 55555555
Q ss_pred h
Q 020874 308 A 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 262 l 262 (267)
T d1nf2a_ 262 S 262 (267)
T ss_dssp C
T ss_pred H
Confidence 5
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.32 E-value=3.4e-12 Score=102.44 Aligned_cols=95 Identities=18% Similarity=0.236 Sum_probs=75.3
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCc--------h----HHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSN--------E----KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAA 244 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~--------~----~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~ 244 (320)
++|++.+.|+.|.++|+.++|+||-+ . ...+.+++.++.. .. .+++......+||.+-++..++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~--i~~~~~~~~~RKP~~GM~~~~~ 126 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMWDHLQ 126 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSSSSTTSTHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--cc--EEEecCccccCCCccHHHHHHH
Confidence 47999999999999999999999942 2 2244555555432 12 4455555678999999999999
Q ss_pred HHcC----CCCCcEEEEecC-----------------HhhHHHHHHcCCeEE
Q 020874 245 STLG----VDPSSCVVVEDS-----------------TIGLAAAKAAGMKCI 275 (320)
Q Consensus 245 ~~~g----~~~~~~v~VGDs-----------------~~Di~~A~~aG~~~v 275 (320)
++++ ++.++.+||||. ..|++.|.++|+++.
T Consensus 127 ~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 127 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp HTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 9985 788999999994 489999999999975
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=3.8e-13 Score=114.35 Aligned_cols=77 Identities=13% Similarity=-0.051 Sum_probs=64.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhh
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDL 307 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~ 307 (320)
++.+--|...++++++++|++++++++|||+.||+.|.+.+|...++ ++..++.++.|++++.+.+| +.+.|.++
T Consensus 185 ~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam---~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 185 IIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM---GNAAENIKQIARYATDDNNHEGALNVIQAV 261 (269)
T ss_dssp ECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC---TTCCHHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred ecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe---CCCCHHHHHhCCEEcCCCCccHHHHHHHHH
Confidence 34555679999999999999999999999999999999999988776 67777777889999988776 67777766
Q ss_pred hh
Q 020874 308 AF 309 (320)
Q Consensus 308 ~~ 309 (320)
+-
T Consensus 262 l~ 263 (269)
T d1rlma_ 262 LD 263 (269)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.20 E-value=1.3e-11 Score=97.97 Aligned_cols=111 Identities=19% Similarity=0.125 Sum_probs=87.7
Q ss_pred HHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh
Q 020874 184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIG 263 (320)
Q Consensus 184 ~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~D 263 (320)
.+..|++.|+.++++|+.....+....+.++... ++. ..+++...++.+++++|+++++++||||+.||
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------~~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nD 108 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------FFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVD 108 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------EEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------ccc-----ccccHHHHHHHHHHHhcCCcceeEEecCCccH
Confidence 3677888999999999998888888888875432 221 23566788999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC--ChhhHHhhh
Q 020874 264 LAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD--PPEERFDLA 308 (320)
Q Consensus 264 i~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e--l~~~l~~~~ 308 (320)
+.+.+.+|+..+. ++..+..+..|++|..+-.. ...++.+++
T Consensus 109 l~~l~~~g~siap---~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 109 LPAFAACGTSFAV---ADAPIYVKNAVDHVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp HHHHHHSSEEEEC---TTSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHHhhCCeEEEc---CCccHHHHHhCCEEeCCCCCCchHHHHHHHH
Confidence 9999999977765 67777888899999887543 233444444
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=7.5e-11 Score=94.67 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=68.9
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchH---HHHHHH-HHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIV-SFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVD 250 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~---~~~~~l-~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~ 250 (320)
..+.||+.++++.++++|++|..+||.... .+...| +.+|.........++.++. ..|... +..++++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~r---r~~Ik~y~I- 158 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNTK---SQWLQDKNI- 158 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCCS---HHHHHHTTE-
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchHH---HHHHHHcCe-
Confidence 456799999999999999999999997532 333444 4465433322224455443 233322 333456776
Q ss_pred CCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCC
Q 020874 251 PSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTA 283 (320)
Q Consensus 251 ~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~ 283 (320)
+++|||..+|+.+|.++|+.+|-+.+..+.
T Consensus 159 ---~l~~GD~l~Df~aA~eagi~~iRi~r~~~s 188 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARDVGARGIRILRASNS 188 (209)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECCCCTTC
T ss_pred ---EEEecCCHHHHhHHHHcCCCceEeeccCCC
Confidence 789999999999999999999998654443
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.18 E-value=9.1e-12 Score=106.11 Aligned_cols=75 Identities=9% Similarity=0.007 Sum_probs=59.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCC--CChhhHHhhh
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIG--DPPEERFDLA 308 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~--el~~~l~~~~ 308 (320)
+.+.-+...+..+++.++++++++++|||+.||+.|.+.+|..+++ ++..++.+..|++++.+-. +....+++.+
T Consensus 203 ~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~---~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~ 279 (283)
T d2b30a1 203 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV---ANATDSAKSHAKCVLPVSHREGAVAYLLKKV 279 (283)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC---TTCCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred CCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe---CCCCHHHHHhCCEEECCcCCCcHHHHHHHHH
Confidence 4556679999999999999999999999999999999999977665 6777777788999986543 3344444433
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.09 E-value=1.7e-11 Score=103.62 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCC
Q 020874 230 VPRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 230 ~~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~e 299 (320)
++.+-.|...++++++++|++++++++|||+.||+.|.+.+|..+++ ++..++.++.|++++.+.++
T Consensus 181 ~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav---~na~~~lk~~A~~vt~~~~~ 247 (260)
T d2rbka1 181 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDE 247 (260)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGG
T ss_pred EeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe---CCCCHHHHHhCCEEeCCCCc
Confidence 34556789999999999999999999999999999999999987655 66677777889998887654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=9.3e-10 Score=90.31 Aligned_cols=46 Identities=7% Similarity=0.029 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEc
Q 020874 232 RKKPDPAIYTLAAS---TLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 232 ~~KP~~~~~~~~~~---~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~ 278 (320)
....|....+.+++ ++|++++++++|||+.||+.|.+.+|.. |.|.
T Consensus 181 ~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~-vaV~ 229 (232)
T d1xvia_ 181 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVK 229 (232)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECC
T ss_pred CCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeE-EEEe
Confidence 34455666666665 4689999999999999999999999964 4444
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.96 E-value=1.6e-09 Score=92.20 Aligned_cols=101 Identities=12% Similarity=0.119 Sum_probs=69.4
Q ss_pred HHhcCCCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC-----CC-C--------CCCCC
Q 020874 170 IEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG-----DV-V--------PRKKP 235 (320)
Q Consensus 170 ~~~~~~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~-----d~-~--------~~~KP 235 (320)
+.+....+.||+.++++.|+++|++++|+|++-...++.++++++... +...+++. ++ . ....-
T Consensus 129 v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~--~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~ 206 (291)
T d2bdua1 129 VADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH--SNVKVVSNFMDFDENGVLKGFKGELIHVFN 206 (291)
T ss_dssp HHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCB--TTEEEEEECEEECTTSBEEEECSSCCCTTC
T ss_pred HHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCc--cCceEEeeEEEEeCCeeEeeccCCcccccc
Confidence 334447899999999999999999999999999999999999986532 11233331 11 1 01111
Q ss_pred CHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHcCC
Q 020874 236 DPAIYTLAASTLG--VDPSSCVVVEDSTIGLAAAKAAGM 272 (320)
Q Consensus 236 ~~~~~~~~~~~~g--~~~~~~v~VGDs~~Di~~A~~aG~ 272 (320)
+..........+. -...++|++|||.+|+.||..+..
T Consensus 207 K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 207 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp HHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred CcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence 2233333333322 356789999999999999987643
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.96 E-value=1.4e-10 Score=96.24 Aligned_cols=59 Identities=10% Similarity=0.004 Sum_probs=45.9
Q ss_pred CCCCCCHHHHHHHHHHcC-CCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCe
Q 020874 231 PRKKPDPAIYTLAASTLG-VDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADA 292 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g-~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~ 292 (320)
..+-.+...+..++++++ ..++++++|||+.||+.|.+.+|..+++ ++...+..+.++.
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~---~Na~~~~~~~~~~ 234 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV---GSLKHKKAQNVSS 234 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE---SSCCCTTCEEESC
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe---CCCChHHHhhhhH
Confidence 344566888999999985 8889999999999999999999977777 5555554444333
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1.2e-08 Score=81.87 Aligned_cols=112 Identities=14% Similarity=0.202 Sum_probs=76.8
Q ss_pred CCCChhHHHHHHHHHHcC-CeEEEEcCCchH------HHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHc
Q 020874 175 LPLRPGVAKLIDQALEKG-VKVAVCSTSNEK------AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTL 247 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G-~~i~lvT~~~~~------~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~ 247 (320)
++++||+.++++.|++.| +.+.++|..... .....|+++.+...... .+++.+ |- .+
T Consensus 73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~-~~~t~~-----K~----------~~ 136 (195)
T d1q92a_ 73 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQ-IVLTRD-----KT----------VV 136 (195)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGG-EEECSC-----ST----------TS
T ss_pred CCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccE-EEEccc-----cc----------ee
Confidence 789999999999999875 467788875421 23345666644333332 444432 21 11
Q ss_pred CCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHHh
Q 020874 248 GVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERFD 306 (320)
Q Consensus 248 g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~~ 306 (320)
+. -++|+|++..+..+.++|+.+|+....++........-..+.++.|+.+.+++
T Consensus 137 ~~----d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~il~ 191 (195)
T d1q92a_ 137 SA----DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 191 (195)
T ss_dssp CC----SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred cC----eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHHHh
Confidence 11 28999999999999999999999987776654333344678999998776665
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.87 E-value=2.3e-10 Score=95.41 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=47.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCC
Q 020874 231 PRKKPDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNAD 291 (320)
Q Consensus 231 ~~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~ 291 (320)
+.+.-|...++.+++++|++++++++|||+.||+.|.+.+|..+++ ++...+.++.|+
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav---~na~~~lk~~a~ 215 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV---RNAQPELLHWYD 215 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC---TTCCHHHHHHHH
T ss_pred eCccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe---CCCCHHHHHHhh
Confidence 3455578999999999999999999999999999999999977665 566665554444
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.81 E-value=2.1e-08 Score=75.20 Aligned_cols=104 Identities=18% Similarity=0.150 Sum_probs=72.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCV 255 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v 255 (320)
++.|++.+.++.|++.|++++++|+.+......+-+.+|+.. ++. +. .|+--....++++.. ..+.
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~------v~~-~~------~p~~k~~~v~~~q~~-~~v~ 86 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------VIA-EV------LPHQKSEEVKKLQAK-EVVA 86 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------EEC-SC------CHHHHHHHHHHHTTT-SCEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh------hcc-cc------chhHHHHHHHHHHcC-CEEE
Confidence 578999999999999999999999999999999989987532 222 21 133333445555433 5788
Q ss_pred EEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC
Q 020874 256 VVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC 296 (320)
Q Consensus 256 ~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~ 296 (320)
||||+.||..+.+.+++...+ +....-....||+++.+
T Consensus 87 ~vGDg~nD~~aL~~Advgia~---~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 87 FVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIR 124 (135)
T ss_dssp EEECSSSSHHHHHHSSEEEEE---CCC--------SEEESS
T ss_pred EEeCCCCcHHHHHhCCeeeec---CccCHHHHHhCCEEEEC
Confidence 999999999999999976554 44444455689988754
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.61 E-value=4.2e-08 Score=79.87 Aligned_cols=61 Identities=10% Similarity=-0.084 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccCCCCChhhHH
Q 020874 235 PDPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDCIGDPPEERF 305 (320)
Q Consensus 235 P~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~l~el~~~l~ 305 (320)
-|..+++.+++ .+++++|||+.||+.|.+.+|..+.+ ..|+. ...|.+.+++.+|+.++|.
T Consensus 159 ~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av-~~g~~----~~~A~~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTI-KVGEG----ETHAKFHVADYIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEE-EESSS----CCCCSEEESSHHHHHHHHH
T ss_pred CHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEE-EeCCC----CccCeEEcCCHHHHHHHHH
Confidence 34555555543 46799999999999999999865333 32332 2578999999888655443
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.50 E-value=4.8e-07 Score=70.34 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=78.3
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccce--eEEeCCCC----------------CCCCCCH
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI--QIFAGDVV----------------PRKKPDP 237 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~--~i~~~d~~----------------~~~KP~~ 237 (320)
++.|++.++++.|++.|++++++|+.+...+..+-+++|+....... ..+.+.++ -..+-.|
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p 99 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 99 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence 67899999999999999999999999999999999998764322110 11111000 0111123
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEcCCCCCcccccCCCeeccC
Q 020874 238 AIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAAGMKCIVTKSSYTAEEDFLNADAVFDC 296 (320)
Q Consensus 238 ~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~aG~~~v~v~~g~~~~~~~~~a~~vi~~ 296 (320)
+--..+.+.++-....+.|+||+.||..+.+.|.+...+ +....-..+.+|+++.+
T Consensus 100 ~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~---~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 100 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM---GSGTAVAKTASEMVLAD 155 (168)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE---TTSCHHHHHTCSEEETT
T ss_pred hHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe---ccccHHHHHhCCEEEcc
Confidence 333333333333345689999999999999999955544 44444455679988655
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=3.4e-07 Score=74.82 Aligned_cols=44 Identities=2% Similarity=-0.231 Sum_probs=32.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEc
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVED----STIGLAAAKAAGMKCIVTK 278 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGD----s~~Di~~A~~aG~~~v~v~ 278 (320)
.+--|..+++++ ++.+++++++||| +.||++|.+.+|...++++
T Consensus 182 ~~vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~ 229 (243)
T d2amya1 182 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT 229 (243)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred cccCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC
Confidence 444455566655 4678899999999 6699999999996666653
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.20 E-value=6.5e-07 Score=72.97 Aligned_cols=43 Identities=2% Similarity=-0.211 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH----hhHHHHHHcCCeEEEE
Q 020874 232 RKKPDPAIYTLAASTLGVDPSSCVVVEDST----IGLAAAKAAGMKCIVT 277 (320)
Q Consensus 232 ~~KP~~~~~~~~~~~~g~~~~~~v~VGDs~----~Di~~A~~aG~~~v~v 277 (320)
.+--|..+++++++ .+.+++++|||+. ||++|.+.+|...+.|
T Consensus 182 ~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av 228 (244)
T d2fuea1 182 EGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV 228 (244)
T ss_dssp TTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred hhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc
Confidence 45556777777664 5889999999975 9999999999655554
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.68 E-value=7.1e-05 Score=54.29 Aligned_cols=41 Identities=12% Similarity=0.111 Sum_probs=32.5
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCc---------------hHHHHHHHHHhcC
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLG 215 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~---------------~~~~~~~l~~~~~ 215 (320)
..|.+++.+.|..|++.|++|.+.|... ...+...|+..|+
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI 78 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV 78 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999863 2346666777654
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.29 E-value=0.00029 Score=50.94 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=31.1
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHh
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL 213 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~ 213 (320)
.+.|++.+.|+.|+++|++|.+.|...........+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL 58 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC 58 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHH
Confidence 45799999999999999999999998776655555544
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.27 E-value=0.00055 Score=60.39 Aligned_cols=102 Identities=13% Similarity=0.105 Sum_probs=74.1
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhc------Ccc---cccceeEEeCCC-----------------C
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL------GPE---RAEKIQIFAGDV-----------------V 230 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~------~~~---~~~~~~i~~~d~-----------------~ 230 (320)
--|.+..+|+.|++.|.++.++||.+-..++..+..+. +.+ +|| .|++.-. .
T Consensus 186 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFD--vVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 186 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEE--EEEESCCHHHHHHSCCCEEEECTTT
T ss_pred CChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhce--EEEeCCCCCCccCCCCcceEEeCCC
Confidence 46889999999999999999999999999988888874 223 565 4443210 0
Q ss_pred C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEcCC
Q 020874 231 P-------RKKPD---PAIYTLAASTLGVDPSSCVVVEDST-IGLAAAK-AAGMKCIVTKSS 280 (320)
Q Consensus 231 ~-------~~KP~---~~~~~~~~~~~g~~~~~~v~VGDs~-~Di~~A~-~aG~~~v~v~~g 280 (320)
+ ..||. .--...+.+.+|+...+++||||+. .||...+ ..|+.++.|-..
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 0 01110 0114456677899889999999999 7988775 579999998654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.67 E-value=0.02 Score=45.41 Aligned_cols=114 Identities=23% Similarity=0.167 Sum_probs=73.3
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeC----CCCCC------------------
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG----DVVPR------------------ 232 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~----d~~~~------------------ 232 (320)
..+.||+.++|+.+++. ++-+|+|..-.++++.+.+..|.. + .+.+. |.+..
T Consensus 80 ~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~---e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~ 153 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--G---ELHGTEVDFDSIAVPEGLREELLSIIDVIASL 153 (308)
T ss_dssp CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--S---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--c---eeecccccccccCCChHHHHHHHHHhhhccCc
Confidence 78889999999999887 888899888888888888887653 1 11111 11110
Q ss_pred ------------------------CCC-----CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc---CCeEEEEcCC
Q 020874 233 ------------------------KKP-----DPAIYTLAASTLGVDPSSCVVVEDSTIGLAAAKAA---GMKCIVTKSS 280 (320)
Q Consensus 233 ------------------------~KP-----~~~~~~~~~~~~g~~~~~~v~VGDs~~Di~~A~~a---G~~~v~v~~g 280 (320)
-|+ +..+.+..+...++.+ .++||||.+|+++.+.+ |--.|..+
T Consensus 154 ~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~--~~~VGDSITDve~Lr~~r~~gGlaIsFN-- 229 (308)
T d1y8aa1 154 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDF--PVVVGDSISDYKMFEAARGLGGVAIAFN-- 229 (308)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSS--CEEEECSGGGHHHHHHHHHTTCEEEEES--
T ss_pred cHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCc--ceeccCccccHHHHHHHhcCCCeeEEec--
Confidence 011 1233344445556665 49999999999998876 33344433
Q ss_pred CCCcccccCCCeeccCCCC
Q 020874 281 YTAEEDFLNADAVFDCIGD 299 (320)
Q Consensus 281 ~~~~~~~~~a~~vi~~l~e 299 (320)
+....+..|+..|-+-+-
T Consensus 230 -GN~Yal~eA~VaiiS~~~ 247 (308)
T d1y8aa1 230 -GNEYALKHADVVIISPTA 247 (308)
T ss_dssp -CCHHHHTTCSEEEECSST
T ss_pred -CccccccccceEEeccch
Confidence 334455678876666554
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.0012 Score=51.07 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=62.0
Q ss_pred CCCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 020874 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSC 254 (320)
Q Consensus 175 ~~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~ 254 (320)
+..+||+.++|+.+.+. +.|+|.|.+...+++.+++.+.....+. ..+..+.....+. .+.+-++.+|.+.+++
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~--~~~~r~~c~~~~~---~~~KdL~~l~~~l~~v 127 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR--ARLFRESCVFHRG---NYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEE--EEECGGGSEEETT---EEECCGGGSCSCGGGE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCcee--EEEEeeeeeecCC---cccccHhhcCCCHHHe
Confidence 45789999999999987 8999999999999999999985544443 3333332211111 1223356678888999
Q ss_pred EEEecCHhhHHH
Q 020874 255 VVVEDSTIGLAA 266 (320)
Q Consensus 255 v~VGDs~~Di~~ 266 (320)
|+|+|++.-...
T Consensus 128 vivDd~~~~~~~ 139 (181)
T d1ta0a_ 128 LILDNSPASYVF 139 (181)
T ss_dssp EEECSCGGGGTT
T ss_pred EEEcCChhhhhc
Confidence 999999965543
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=89.30 E-value=2.9 Score=32.53 Aligned_cols=96 Identities=17% Similarity=0.103 Sum_probs=67.0
Q ss_pred CCChhHHHHHH---HHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCC-CCCCCCCCHHHHHHHHHHcCCCC
Q 020874 176 PLRPGVAKLID---QALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD-VVPRKKPDPAIYTLAASTLGVDP 251 (320)
Q Consensus 176 ~~~pg~~e~l~---~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d-~~~~~KP~~~~~~~~~~~~g~~~ 251 (320)
.++|+..++++ .|-+.|+.|..+++.+... ...|+..|-. -. .-..+- -.+.+--++..++.++++..++
T Consensus 106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~-ak~Le~~Gc~-av---MPlgsPIGSg~Gl~n~~~l~~i~~~~~vP- 179 (251)
T d1xm3a_ 106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVL-ARKLEELGVH-AI---MPGASPIGSGQGILNPLNLSFIIEQAKVP- 179 (251)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHH-HHHHHHHTCS-CB---EECSSSTTCCCCCSCHHHHHHHHHHCSSC-
T ss_pred CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHH-HHHHHHcCCh-hH---HHhhhhhhcCCCcCChHHHHHHHhcCCcc-
Confidence 47788777775 5567799999999987764 4455555321 11 111221 2246677899999999987763
Q ss_pred CcEEEEecCH---hhHHHHHHcCCeEEEEcCC
Q 020874 252 SSCVVVEDST---IGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 252 ~~~v~VGDs~---~Di~~A~~aG~~~v~v~~g 280 (320)
|+|+-+. .|...|-+.|+..|+++..
T Consensus 180 ---vIvDAGIG~pSdAa~AMElG~daVLvNTA 208 (251)
T d1xm3a_ 180 ---VIVDAGIGSPKDAAYAMELGADGVLLNTA 208 (251)
T ss_dssp ---BEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred ---EEEecCCCCHHHHHHHHHccCCEEEechh
Confidence 6776544 8999999999999998753
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=88.77 E-value=0.27 Score=38.98 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=30.4
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCc---hHHHHHHHHHhcC
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLG 215 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~---~~~~~~~l~~~~~ 215 (320)
++|++.++|+.|+++|++++++||++ .......++.+|.
T Consensus 20 ~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 20 AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence 35899999999999999999999865 3445555666654
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=88.02 E-value=0.45 Score=36.08 Aligned_cols=88 Identities=16% Similarity=0.131 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCcccccceeEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 020874 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYTLAASTLGVDPSSCVVVED 259 (320)
Q Consensus 180 g~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~~~~~~~~i~~~d~~~~~KP~~~~~~~~~~~~g~~~~~~v~VGD 259 (320)
++.+.|..+++.+-++++++-.+.-.--..+..+...+... ..+...+ +-+....-+++-|++ ++|||
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i~~--~~~~~~~------e~~~~v~~l~~~G~~----vVVG~ 149 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQ--RSYITEE------DARGQINELKANGTE----AVVGA 149 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEE--EEESSHH------HHHHHHHHHHHTTCC----EEEES
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCceEE--EEecCHH------HHHHHHHHHHHCCCC----EEECC
Confidence 45666666667788999998654433333344432222221 2222211 112222334455664 77999
Q ss_pred CHhhHHHHHHcCCeEEEEcCC
Q 020874 260 STIGLAAAKAAGMKCIVTKSS 280 (320)
Q Consensus 260 s~~Di~~A~~aG~~~v~v~~g 280 (320)
+.. ...|+++|++.+++..+
T Consensus 150 ~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 150 GLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp HHH-HHHHHHTTSEEEESSCH
T ss_pred hHH-HHHHHHcCCCEEEEeCH
Confidence 975 47789999999998654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=87.13 E-value=0.41 Score=38.27 Aligned_cols=40 Identities=20% Similarity=0.138 Sum_probs=35.2
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+.+...+.|++|+++|++++++|+.+...+...++.++..
T Consensus 19 i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~ 58 (285)
T d1nrwa_ 19 VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK 58 (285)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence 3488889999999999999999999999999999888654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=82.81 E-value=0.72 Score=35.59 Aligned_cols=38 Identities=11% Similarity=0.054 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 179 pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
+...+.|+.|+++|++++++|+.+...+...++.++..
T Consensus 20 ~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp GGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 34568899999999999999999999999999998654
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=82.59 E-value=0.38 Score=38.11 Aligned_cols=36 Identities=8% Similarity=0.204 Sum_probs=27.6
Q ss_pred CChhHHHHHHHHHHcCCeEEEEcCCch---HHHHHHHHH
Q 020874 177 LRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSF 212 (320)
Q Consensus 177 ~~pg~~e~l~~L~~~G~~i~lvT~~~~---~~~~~~l~~ 212 (320)
+.|++.++++.|+++|++++++||+.. ..+...++.
T Consensus 19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~ 57 (253)
T d1wvia_ 19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLAT 57 (253)
T ss_dssp ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 359999999999999999999998643 334444433
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=81.11 E-value=1.2 Score=33.76 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=34.4
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhcCc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP 216 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~~~ 216 (320)
.+.+.+.++|++|++.|++++++|+.+...+...+...+..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~ 59 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 59 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCC
Confidence 45578889999999999999999999988888888776543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=80.49 E-value=0.81 Score=36.23 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=33.8
Q ss_pred CCChhHHHHHHHHHHcCCeEEEEcCCchHHHHHHHHHhc
Q 020874 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL 214 (320)
Q Consensus 176 ~~~pg~~e~l~~L~~~G~~i~lvT~~~~~~~~~~l~~~~ 214 (320)
.+.|.+.+.|+.|+++|++++++|+.+...+...++.++
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~ 66 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN 66 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhC
Confidence 456888999999999999999999999888888777664
|